Your job contains 1 sequence.
>psy4846
MDNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAAAVYFSSGMLQQSDF
HHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNLNYRNR
QAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNALQILIPKSRVQDEDGYVLYVRKNA
LQILIPKYGLEGTLFLRCDSPSVSWTYNEKEQSQSCGSVVFHSFDPVTVQLSLDRSNVQH
EKLVLRLVRPVIEGFSVSSAGEQGEEKMEEGETRSLYCD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4846
(279 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039183 - symbol:Dis3 "Dis3" species:7227 "Drosoph... 661 1.7e-64 1
UNIPROTKB|G3V1J5 - symbol:DIS3 "Exosome complex exonuclea... 429 4.0e-50 2
MGI|MGI:1919912 - symbol:Dis3 "DIS3 mitotic control homol... 439 8.8e-50 2
UNIPROTKB|Q9Y2L1 - symbol:DIS3 "Exosome complex exonuclea... 429 1.2e-49 2
UNIPROTKB|F1N1R4 - symbol:DIS3 "Uncharacterized protein" ... 432 1.5e-49 2
UNIPROTKB|F1RHF7 - symbol:DIS3 "Uncharacterized protein" ... 428 1.8e-49 2
UNIPROTKB|E2RNY6 - symbol:DIS3 "Uncharacterized protein" ... 427 4.1e-49 2
ZFIN|ZDB-GENE-080213-3 - symbol:dis3 "DIS3 mitotic contro... 438 9.6e-49 2
UNIPROTKB|E1BXX6 - symbol:DIS3 "Uncharacterized protein" ... 430 2.9e-48 2
UNIPROTKB|G4NDV8 - symbol:MGG_00193 "Mitotic control prot... 310 1.2e-33 2
ASPGD|ASPL0000011287 - symbol:AN3657 species:162425 "Emer... 303 3.6e-33 2
DICTYBASE|DDB_G0293614 - symbol:DDB_G0293614 "putative ex... 372 4.2e-33 1
POMBASE|SPBC26H8.10 - symbol:dis3 "3'-5' exoribonuclease ... 305 9.0e-32 2
WB|WBGene00001001 - symbol:dis-3 species:6239 "Caenorhabd... 353 4.2e-31 1
MGI|MGI:2143272 - symbol:Dis3l "DIS3 mitotic control homo... 297 8.4e-31 2
UNIPROTKB|F1MEA6 - symbol:DIS3L "DIS3-like exonuclease 1"... 295 1.1e-30 2
UNIPROTKB|F1PK78 - symbol:DIS3L "Uncharacterized protein"... 296 2.0e-30 2
RGD|1308959 - symbol:Dis3l "DIS3 mitotic control homolog ... 293 2.3e-30 2
UNIPROTKB|A0JN80 - symbol:DIS3L "DIS3-like exonuclease 1"... 290 3.7e-30 2
UNIPROTKB|F1SJJ9 - symbol:DIS3L "Uncharacterized protein"... 293 4.7e-30 2
UNIPROTKB|I3LEH1 - symbol:DIS3L "Uncharacterized protein"... 293 4.7e-30 2
SGD|S000005381 - symbol:DIS3 "Exosome core complex cataly... 286 6.6e-30 2
CGD|CAL0003527 - symbol:orf19.5229 species:5476 "Candida ... 271 3.0e-29 2
UNIPROTKB|Q8TF46 - symbol:DIS3L "DIS3-like exonuclease 1"... 280 1.1e-28 2
UNIPROTKB|Q5R5N8 - symbol:DIS3L "DIS3-like exonuclease 1"... 280 1.1e-28 2
ZFIN|ZDB-GENE-070209-95 - symbol:dis3l "DIS3 mitotic cont... 266 3.5e-27 2
UNIPROTKB|Q0P4R5 - symbol:dis3l "DIS3-like exonuclease 1"... 260 3.8e-26 2
UNIPROTKB|Q6GN11 - symbol:dis3l "DIS3-like exonuclease 1"... 251 5.0e-26 2
UNIPROTKB|F1NKN5 - symbol:LOC100857630 "Uncharacterized p... 250 2.4e-25 2
DICTYBASE|DDB_G0268186 - symbol:DDB_G0268186 species:4468... 206 8.3e-20 2
FB|FBgn0035111 - symbol:CG16940 species:7227 "Drosophila ... 201 3.2e-18 2
RGD|1560168 - symbol:Dis3l2 "DIS3 mitotic control homolog... 200 5.3e-18 2
UNIPROTKB|E2QZ40 - symbol:DIS3L2 "Uncharacterized protein... 202 8.1e-18 2
UNIPROTKB|F6XKS7 - symbol:DIS3L2 "Uncharacterized protein... 202 8.4e-18 2
MGI|MGI:2442555 - symbol:Dis3l2 "DIS3 mitotic control hom... 197 1.1e-17 2
UNIPROTKB|Q8IYB7 - symbol:DIS3L2 "DIS3-like exonuclease 2... 202 1.4e-17 2
UNIPROTKB|E1C372 - symbol:DIS3L2 "Uncharacterized protein... 194 1.7e-16 2
UNIPROTKB|I3LLL5 - symbol:I3LLL5 "Uncharacterized protein... 181 2.8e-14 2
UNIPROTKB|H7C440 - symbol:DIS3L2 "DIS3-like exonuclease 2... 177 2.0e-13 2
UNIPROTKB|E1B7R0 - symbol:DIS3L2 "Uncharacterized protein... 182 5.0e-13 2
GENEDB_PFALCIPARUM|MAL13P1.289 - symbol:MAL13P1.289 "mito... 180 2.3e-12 2
UNIPROTKB|Q8IDB6 - symbol:MAL13P1.289 "Mitotic control pr... 180 2.3e-12 2
DICTYBASE|DDB_G0278757 - symbol:DDB_G0278757 "DIS3-like e... 171 4.4e-12 2
ZFIN|ZDB-GENE-070705-171 - symbol:si:ch211-273k1.4 "si:ch... 170 1.0e-10 2
TAIR|locus:2203231 - symbol:AT1G77680 species:3702 "Arabi... 163 1.2e-10 2
CGD|CAL0003016 - symbol:SSD1 species:5476 "Candida albica... 140 2.3e-09 2
UNIPROTKB|Q5AK62 - symbol:SSD1 "Putative uncharacterized ... 140 2.3e-09 2
ASPGD|ASPL0000054659 - symbol:AN1158 species:162425 "Emer... 159 2.4e-09 2
POMBASE|SPAC2C4.07c - symbol:SPAC2C4.07c "ribonuclease II... 153 1.1e-08 2
WB|WBGene00018612 - symbol:F48E8.6 species:6239 "Caenorha... 140 1.5e-08 2
TIGR_CMR|GSU_1485 - symbol:GSU_1485 "ribonuclease R, puta... 143 6.5e-07 1
SGD|S000002701 - symbol:SSD1 "Translational repressor wit... 143 1.2e-06 2
TIGR_CMR|CPS_4617 - symbol:CPS_4617 "ribonuclease R" spec... 128 3.7e-05 1
TIGR_CMR|CHY_0289 - symbol:CHY_0289 "ribonuclease R" spec... 126 5.2e-05 1
TIGR_CMR|BA_5334 - symbol:BA_5334 "ribonuclease R" specie... 124 0.00010 1
TIGR_CMR|SPO_3330 - symbol:SPO_3330 "ribonuclease R" spec... 122 0.00015 1
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 126 0.00026 1
UNIPROTKB|Q5HVE0 - symbol:CJE0734 "RNB-like protein" spec... 119 0.00027 1
TIGR_CMR|CJE_0734 - symbol:CJE_0734 "RNB-like protein" sp... 119 0.00027 1
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 124 0.00039 1
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 122 0.00063 1
>FB|FBgn0039183 [details] [associations]
symbol:Dis3 "Dis3" species:7227 "Drosophila melanogaster"
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=ISS] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=ISS;IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005652 "nuclear lamina" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0071027 "nuclear RNA
surveillance" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0022008 GO:GO:0003723 GO:GO:0004540 GO:GO:0010468
GO:GO:0005652 GO:GO:0000176 InterPro:IPR022966 PROSITE:PS01175
SMART:SM00670 GO:GO:0071027 FlyBase:FBgn0039183 EMBL:AJ276897
ProteinModelPortal:Q9BI20 STRING:Q9BI20 PRIDE:Q9BI20
InParanoid:Q9BI20 ArrayExpress:Q9BI20 Bgee:Q9BI20 Uniprot:Q9BI20
Length = 983
Score = 661 (237.7 bits), Expect = 1.7e-64, P = 1.7e-64
Identities = 132/221 (59%), Positives = 169/221 (76%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
L T AVYF SG LQ+ +F HYGLA PIYTHFTSPIRRY+DI+VHRLLAA IGAD+T
Sbjct: 751 LTTRCMMQAVYFISGSLQKEEFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADST 810
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNALQ 158
Y LLD+K++ LC+NLNYR++ AQYAGRASVAL+THLFFR + +DE+GYVL+VRKNALQ
Sbjct: 811 YAQLLDRKSNEELCHNLNYRHKMAQYAGRASVALNTHLFFRGKEEDEEGYVLFVRKNALQ 870
Query: 159 ILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTYNEKEQSQSCGS 218
+LIPK ++ LY++ + K G +G ++ + + +T+NE++ +Q CG
Sbjct: 871 VLIPKYGLEG----TLYLKSD-------KDGKDGVERVKSE---IVFTFNEEDHTQRCGD 916
Query: 219 VVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEGFSVSS 259
VVFHSFDPVTV+LSLD SNVQHEKL+ RLV+P I+GFSV +
Sbjct: 917 VVFHSFDPVTVRLSLDSSNVQHEKLIFRLVKPYIKGFSVET 957
>UNIPROTKB|G3V1J5 [details] [associations]
symbol:DIS3 "Exosome complex exonuclease RRP44"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0003723
GO:GO:0004540 EMBL:AL138695 InterPro:IPR022966 PROSITE:PS01175
EMBL:CH471093 EMBL:AL391384 UniGene:Hs.740506 HGNC:HGNC:20604
ChiTaRS:DIS3 ProteinModelPortal:G3V1J5 SMR:G3V1J5
Ensembl:ENST00000545453 ArrayExpress:G3V1J5 Bgee:G3V1J5
Uniprot:G3V1J5
Length = 796
Score = 429 (156.1 bits), Expect = 4.0e-50, Sum P(2) = 4.0e-50
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
LAT AVYF SGM +DFHHYGLA+PIYTHFTSPIRRYAD+IVHRLLA IGAD T
Sbjct: 581 LATRCMMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCT 638
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR-VQDEDGYVLYVRKNAL 157
YP L DK +C NLN+R++ AQYA RASVA HT LFF+S+ + E+ Y+L+VRKNA+
Sbjct: 639 YPELTDKHKLADICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAI 698
Query: 158 QILIPKSRVQDEDGYVLYVRKNAL--QIL----IPKYGLEGTLF 195
+LIPK ++ G V + K+ Q++ IP +E T+F
Sbjct: 699 VVLIPKYGLE---GTVFFEEKDKPNPQLIYDDEIPSLKIEDTVF 739
Score = 224 (83.9 bits), Expect = 6.7e-28, Sum P(2) = 6.7e-28
Identities = 44/101 (43%), Positives = 63/101 (62%)
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLR-CDSPSVSWTYNEKEQSQSC 216
Q+ + E+ Y+L+VRKNA+ +LIPKYGLEGT+F D P+ Y+++ S
Sbjct: 675 QLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKI 734
Query: 217 GSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEGFSV 257
VFH FD V V++ LD SN+QH+K+ + LV P I G S+
Sbjct: 735 EDTVFHVFDKVKVKIMLDSSNLQHQKIRMSLVEPQIPGISI 775
Score = 125 (49.1 bits), Expect = 4.0e-50, Sum P(2) = 4.0e-50
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
++A+LR+HP PPP+N+E L+ AAR + E+ T K LA SLD A
Sbjct: 522 EHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQA 566
>MGI|MGI:1919912 [details] [associations]
symbol:Dis3 "DIS3 mitotic control homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=ISO] [GO:0000176 "nuclear exosome (RNase
complex)" evidence=ISO] [GO:0000178 "exosome (RNase complex)"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=ISO] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0016075 "rRNA
catabolic process" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0071034 "CUT catabolic process" evidence=ISO]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 MGI:MGI:1919912
InterPro:IPR006596 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0003723 GO:GO:0005085 GO:GO:0004519 GO:GO:0016075
GO:GO:0006364 GO:GO:0000176 GO:GO:0000175 eggNOG:COG0557
HOGENOM:HOG000191945 HOVERGEN:HBG059397 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 CTD:22894 OrthoDB:EOG45B1DT
EMBL:AK012840 EMBL:AK032091 EMBL:AK129259 IPI:IPI00407764
RefSeq:NP_082591.2 UniGene:Mm.163339 ProteinModelPortal:Q9CSH3
SMR:Q9CSH3 STRING:Q9CSH3 PhosphoSite:Q9CSH3 PaxDb:Q9CSH3
PRIDE:Q9CSH3 Ensembl:ENSMUST00000042471 GeneID:72662 KEGG:mmu:72662
UCSC:uc007uuw.1 InParanoid:Q9CSH3 NextBio:336687 Bgee:Q9CSH3
CleanEx:MM_DIS3 Genevestigator:Q9CSH3 Uniprot:Q9CSH3
Length = 958
Score = 439 (159.6 bits), Expect = 8.8e-50, Sum P(2) = 8.8e-50
Identities = 96/175 (54%), Positives = 117/175 (66%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
LAT AVYF SGM +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD T
Sbjct: 743 LATRCMMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCT 800
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR-VQDEDGYVLYVRKNAL 157
YP L DK + +C NLN+R++ AQYA RASVA HT LFF+S+ + E+ Y+L+VRKNA+
Sbjct: 801 YPELTDKHKLSDICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAI 860
Query: 158 QILIPKSRVQDEDGYVLYVRKN------ALQILIPKYGLEGTLFLRCDSPSVSWT 206
+LIPK ++ G V + K+ A IP +EGT+F D V T
Sbjct: 861 VVLIPKYGLE---GTVFFEEKDKPKPRLAYDDEIPSLRIEGTVFHVFDKVKVKIT 912
Score = 221 (82.9 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 43/101 (42%), Positives = 63/101 (62%)
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLR-CDSPSVSWTYNEKEQSQSC 216
Q+ + E+ Y+L+VRKNA+ +LIPKYGLEGT+F D P Y+++ S
Sbjct: 837 QLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPKPRLAYDDEIPSLRI 896
Query: 217 GSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEGFSV 257
VFH FD V V+++LD SN+QH+K+ + LV P I G ++
Sbjct: 897 EGTVFHVFDKVKVKITLDSSNLQHQKIRMALVEPQIPGINI 937
Score = 116 (45.9 bits), Expect = 8.8e-50, Sum P(2) = 8.8e-50
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
++A+LR+HP PPP+N++ L+ AA+ + ++ T K LA SLD A
Sbjct: 684 EHALLRKHPAPPPSNYDILVKAAKSKNLQIKTDTAKSLADSLDRA 728
>UNIPROTKB|Q9Y2L1 [details] [associations]
symbol:DIS3 "Exosome complex exonuclease RRP44"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0000178 "exosome (RNase complex)" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0000176 "nuclear exosome (RNase complex)" evidence=IDA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IMP]
[GO:0004519 "endonuclease activity" evidence=IMP] [GO:0016075 "rRNA
catabolic process" evidence=IMP] [GO:0071034 "CUT catabolic
process" evidence=IMP] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0043928
"exonucleolytic nuclear-transcribed mRNA catabolic process involved
in deadenylation-dependent decay" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
InterPro:IPR006596 GO:GO:0005829 GO:GO:0005654 GO:GO:0003723
GO:GO:0005085 GO:GO:0004519 GO:GO:0016075 GO:GO:0006364
EMBL:AL138695 GO:GO:0000176 GO:GO:0000175 GO:GO:0043928
eggNOG:COG0557 HOVERGEN:HBG059397 InterPro:IPR022966
PROSITE:PS01175 KO:K12585 OMA:MPWSITE SMART:SM00670 EMBL:CH471093
GO:GO:0071034 EMBL:AL391384 EMBL:AF330044 EMBL:AB023225
EMBL:AL832266 EMBL:AK314715 EMBL:AL080158 EMBL:BC056143
IPI:IPI00183462 IPI:IPI00746351 PIR:JE0110 RefSeq:NP_001121698.1
RefSeq:NP_055768.3 UniGene:Hs.740506 ProteinModelPortal:Q9Y2L1
SMR:Q9Y2L1 IntAct:Q9Y2L1 STRING:Q9Y2L1 PhosphoSite:Q9Y2L1
DMDM:73620993 SWISS-2DPAGE:Q9Y2L1 PaxDb:Q9Y2L1 PRIDE:Q9Y2L1
Ensembl:ENST00000377767 Ensembl:ENST00000377780 GeneID:22894
KEGG:hsa:22894 UCSC:uc001vix.4 UCSC:uc001viy.4 CTD:22894
GeneCards:GC13M073329 H-InvDB:HIX0011365 HGNC:HGNC:20604
HPA:HPA039281 MIM:607533 neXtProt:NX_Q9Y2L1 PharmGKB:PA162383628
InParanoid:Q9Y2L1 OrthoDB:EOG45B1DT PhylomeDB:Q9Y2L1 ChiTaRS:DIS3
GenomeRNAi:22894 NextBio:43511 ArrayExpress:Q9Y2L1 Bgee:Q9Y2L1
CleanEx:HS_DIS3 Genevestigator:Q9Y2L1 GermOnline:ENSG00000083520
Uniprot:Q9Y2L1
Length = 958
Score = 429 (156.1 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
LAT AVYF SGM +DFHHYGLA+PIYTHFTSPIRRYAD+IVHRLLA IGAD T
Sbjct: 743 LATRCMMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCT 800
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR-VQDEDGYVLYVRKNAL 157
YP L DK +C NLN+R++ AQYA RASVA HT LFF+S+ + E+ Y+L+VRKNA+
Sbjct: 801 YPELTDKHKLADICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAI 860
Query: 158 QILIPKSRVQDEDGYVLYVRKNAL--QIL----IPKYGLEGTLF 195
+LIPK ++ G V + K+ Q++ IP +E T+F
Sbjct: 861 VVLIPKYGLE---GTVFFEEKDKPNPQLIYDDEIPSLKIEDTVF 901
Score = 224 (83.9 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 44/101 (43%), Positives = 63/101 (62%)
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLR-CDSPSVSWTYNEKEQSQSC 216
Q+ + E+ Y+L+VRKNA+ +LIPKYGLEGT+F D P+ Y+++ S
Sbjct: 837 QLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKI 896
Query: 217 GSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEGFSV 257
VFH FD V V++ LD SN+QH+K+ + LV P I G S+
Sbjct: 897 EDTVFHVFDKVKVKIMLDSSNLQHQKIRMSLVEPQIPGISI 937
Score = 125 (49.1 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
++A+LR+HP PPP+N+E L+ AAR + E+ T K LA SLD A
Sbjct: 684 EHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQA 728
>UNIPROTKB|F1N1R4 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071034 "CUT catabolic process" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005654 GO:GO:0003723 GO:GO:0005085 GO:GO:0004519
GO:GO:0016075 GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 EMBL:DAAA02033486 EMBL:DAAA02033485
IPI:IPI01017508 Ensembl:ENSBTAT00000026500 Uniprot:F1N1R4
Length = 951
Score = 432 (157.1 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 103/208 (49%), Positives = 126/208 (60%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
LAT AVYF SGM +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD T
Sbjct: 736 LATRCMMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCT 793
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR-VQDEDGYVLYVRKNAL 157
YP L DK LC NLN+R++ AQYA RASVA HT LFF+S+ + E+ Y+L+VRKNA+
Sbjct: 794 YPELTDKHKLADLCKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAI 853
Query: 158 QILIPKSRVQDEDGYVLYVRK---NALQIL---IPKYGLEGTLFLRCDSPSVSWTYNEKE 211
+LIPK ++ G V + K N I IP +E T+F D V +
Sbjct: 854 VVLIPKYGLE---GTVFFEEKDKPNPRLIYDDEIPSLKIEDTVFHVFDKVKVKIMLDSSN 910
Query: 212 -QSQSCGSVVFHSFDPVTVQLSLDRSNV 238
Q Q + P + +S D SN+
Sbjct: 911 LQHQKIRMSLVEPQIP-GISVSADTSNM 937
Score = 229 (85.7 bits), Expect = 8.9e-28, Sum P(2) = 8.9e-28
Identities = 46/103 (44%), Positives = 65/103 (63%)
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLR-CDSPSVSWTYNEKEQSQSC 216
Q+ + E+ Y+L+VRKNA+ +LIPKYGLEGT+F D P+ Y+++ S
Sbjct: 830 QLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPRLIYDDEIPSLKI 889
Query: 217 GSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEGFSVSS 259
VFH FD V V++ LD SN+QH+K+ + LV P I G SVS+
Sbjct: 890 EDTVFHVFDKVKVKIMLDSSNLQHQKIRMSLVEPQIPGISVSA 932
Score = 121 (47.7 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
++A+LR+HP PPP+N+E L+ AA+ + E+ T K LA SLD A
Sbjct: 677 EHALLRKHPAPPPSNYEILVKAAKSKNLEIKTDTAKALADSLDQA 721
>UNIPROTKB|F1RHF7 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071034 "CUT catabolic process" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0005654
GO:GO:0003723 GO:GO:0005085 GO:GO:0004519 GO:GO:0016075
GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 OMA:MPWSITE GO:GO:0071034
EMBL:FP101966 Ensembl:ENSSSCT00000010370 Uniprot:F1RHF7
Length = 752
Score = 428 (155.7 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 99/212 (46%), Positives = 130/212 (61%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
LAT AVYF SGM +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD T
Sbjct: 537 LATRCMMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCT 594
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR-VQDEDGYVLYVRKNAL 157
YP L DK LC NLN+R++ AQYA RASVA HT LFF+S+ + E+ Y+L+VRKNA+
Sbjct: 595 YPELTDKHKLADLCKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAI 654
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQ--IL----IPKYGLEGTLFLRCDSPSVSWTYNEKE 211
+LIPK ++ G V + K+ + ++ +P +E T+F D V +
Sbjct: 655 VVLIPKYGLE---GTVFFEEKDKPKPRLIYDDEVPSLKIEDTVFHIFDKVKVRIMLDSSN 711
Query: 212 -QSQSCGSVVFHSFDPVTVQLSLDRSNVQHEK 242
Q Q ++ P + + D SN+ + +
Sbjct: 712 LQHQKIRMLLVEPQIP-GISVPTDTSNMDNSE 742
Score = 223 (83.6 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 45/101 (44%), Positives = 62/101 (61%)
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLR-CDSPSVSWTYNEKEQSQSC 216
Q+ + E+ Y+L+VRKNA+ +LIPKYGLEGT+F D P Y+++ S
Sbjct: 631 QLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPKPRLIYDDEVPSLKI 690
Query: 217 GSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEGFSV 257
VFH FD V V++ LD SN+QH+K+ + LV P I G SV
Sbjct: 691 EDTVFHIFDKVKVRIMLDSSNLQHQKIRMLLVEPQIPGISV 731
Score = 118 (46.6 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLD 44
++A+LR+HP PPP+N+E L+ AA+ + E+ T K LA SLD
Sbjct: 478 EHALLRKHPAPPPSNYEILVKAAKSKNLEIKTDTAKALADSLD 520
>UNIPROTKB|E2RNY6 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071034 "CUT catabolic process" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005654 GO:GO:0003723 GO:GO:0005085 GO:GO:0004519
GO:GO:0016075 GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 CTD:22894 EMBL:AAEX03013240
RefSeq:XP_542610.3 Ensembl:ENSCAFT00000008080 GeneID:485491
KEGG:cfa:485491 NextBio:20859485 Uniprot:E2RNY6
Length = 958
Score = 427 (155.4 bits), Expect = 4.1e-49, Sum P(2) = 4.1e-49
Identities = 87/142 (61%), Positives = 104/142 (73%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
LAT AVYF SGM +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD T
Sbjct: 743 LATRCMMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCT 800
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR-VQDEDGYVLYVRKNAL 157
YP L DK LC NLN+R++ AQYA RASVA HT LFF+S+ + E+ Y+L+VRKNA+
Sbjct: 801 YPELTDKHKLADLCKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAI 860
Query: 158 QILIPKSRVQDEDGYVLYVRKN 179
+LIPK ++ G V + K+
Sbjct: 861 VVLIPKYGLE---GTVFFEEKD 879
Score = 224 (83.9 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLR-CDSPSVSWTYNEKEQSQSC 216
Q+ + E+ Y+L+VRKNA+ +LIPKYGLEGT+F D P Y+++ S
Sbjct: 837 QLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPKPKLIYDDEVPSLKI 896
Query: 217 GSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEGFSV 257
VFH FD V V++ LD SN+QH+K+ + LV P I G S+
Sbjct: 897 EDTVFHIFDKVKVKIMLDSSNLQHQKIRMSLVEPQIPGISI 937
Score = 122 (48.0 bits), Expect = 4.1e-49, Sum P(2) = 4.1e-49
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
++A+LR+HP PPP+N+E L+ AA+ + E+ T K LA SLD A
Sbjct: 684 EHALLRKHPAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRA 728
>ZFIN|ZDB-GENE-080213-3 [details] [associations]
symbol:dis3 "DIS3 mitotic control homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
ZFIN:ZDB-GENE-080213-3 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
KO:K12585 SMART:SM00670 CTD:22894 EMBL:BX571717 IPI:IPI00803594
RefSeq:XP_001336850.2 UniGene:Dr.51536 ProteinModelPortal:E7FE01
Ensembl:ENSDART00000085454 GeneID:100003553 KEGG:dre:100003553
NextBio:20785882 Bgee:E7FE01 Uniprot:E7FE01
Length = 950
Score = 438 (159.2 bits), Expect = 9.6e-49, Sum P(2) = 9.6e-49
Identities = 88/142 (61%), Positives = 109/142 (76%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
LAT AVYF SGM SDFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA I AD+T
Sbjct: 740 LATRCMMQAVYFCSGM--DSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAINADST 797
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR-VQDEDGYVLYVRKNAL 157
YP L+DK +ALC N+NYR++ AQYA RASVA HT LFF+++ + +E+G++L+VRKNA+
Sbjct: 798 YPDLMDKHKQSALCNNINYRHKMAQYAQRASVAFHTQLFFKNKGIINEEGFILFVRKNAI 857
Query: 158 QILIPKSRVQDEDGYVLYVRKN 179
ILIPK ++ G V + K+
Sbjct: 858 IILIPKFGLE---GTVFFENKD 876
Score = 203 (76.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 42/101 (41%), Positives = 63/101 (62%)
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRC-DSPSVSWTYNEKEQSQSC 216
Q+ + +E+G++L+VRKNA+ ILIPK+GLEGT+F D PS +++ + +
Sbjct: 834 QLFFKNKGIINEEGFILFVRKNAIIILIPKFGLEGTVFFENKDKPSPRLSFDTEGPTLKV 893
Query: 217 GSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEGFSV 257
F FD V V +SLD SN+QH+++ + L PVI G SV
Sbjct: 894 EEHTFRIFDRVKVTISLDASNLQHQRIRMALTEPVIPGVSV 934
Score = 107 (42.7 bits), Expect = 9.6e-49, Sum P(2) = 9.6e-49
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAAAV 48
A+LR+HP PPP+N++ L+ AA+ + E+ + K LA SL+ A +
Sbjct: 683 ALLRKHPAPPPSNYDILIKAAKSRDLEIHTDSAKALADSLNNATI 727
>UNIPROTKB|E1BXX6 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0016075 "rRNA catabolic process" evidence=IEA]
[GO:0071034 "CUT catabolic process" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005654 GO:GO:0003723 GO:GO:0005085 GO:GO:0004519
GO:GO:0016075 GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 CTD:22894 EMBL:AADN02042596
IPI:IPI00592352 RefSeq:XP_417016.2 ProteinModelPortal:E1BXX6
Ensembl:ENSGALT00000027368 GeneID:418821 KEGG:gga:418821
NextBio:20821959 Uniprot:E1BXX6
Length = 963
Score = 430 (156.4 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 88/142 (61%), Positives = 105/142 (73%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
L T AVYF SGM SDFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD+T
Sbjct: 746 LTTRCMMQAVYFCSGM--DSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADST 803
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR-VQDEDGYVLYVRKNAL 157
YP L DK LC NLNYR++ AQYA RASVA HT LFF+++ V +ED Y+L+VR+NA+
Sbjct: 804 YPELTDKHKLADLCKNLNYRHKMAQYAQRASVAFHTQLFFKTKGVVNEDAYILFVRRNAV 863
Query: 158 QILIPKSRVQDEDGYVLYVRKN 179
+LIPK ++ G V + K+
Sbjct: 864 VVLIPKYGLE---GTVFFEEKD 882
Score = 206 (77.6 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 42/96 (43%), Positives = 59/96 (61%)
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLR-CDSPSVSWTYNEKEQSQSC 216
Q+ V +ED Y+L+VR+NA+ +LIPKYGLEGT+F D P+ YN + S +
Sbjct: 840 QLFFKTKGVVNEDAYILFVRRNAVVVLIPKYGLEGTVFFEEKDKPTPKLDYNSEVPSLTV 899
Query: 217 GSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVI 252
FD VTV ++LD SN+QH+K+ + LV P I
Sbjct: 900 EDTTLCVFDKVTVSVTLDASNIQHQKIRMELVEPKI 935
Score = 111 (44.1 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LR+HP PPP+N++ L+ AA+ + E+ + K LA SLD A
Sbjct: 689 ALLRKHPAPPPSNYDILVKAAKSKNLEIKTDSAKALAESLDKA 731
>UNIPROTKB|G4NDV8 [details] [associations]
symbol:MGG_00193 "Mitotic control protein dis3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001900 InterPro:IPR003029 Pfam:PF00773
PROSITE:PS50126 SMART:SM00955 InterPro:IPR006596 GO:GO:0005730
EMBL:CM001235 GO:GO:0004521 GO:GO:0000049 GO:GO:0071039
GO:GO:0071035 GO:GO:0071038 GO:GO:0000176 GO:GO:0000175
GO:GO:0000177 GO:GO:0000467 GO:GO:0070651 InterPro:IPR022967
SMART:SM00316 InterPro:IPR022966 PROSITE:PS01175 KO:K12585
SMART:SM00670 GO:GO:0071028 RefSeq:XP_003718924.1
ProteinModelPortal:G4NDV8 SMR:G4NDV8 EnsemblFungi:MGG_00193T0
GeneID:2674544 KEGG:mgr:MGG_00193 Uniprot:G4NDV8
Length = 990
Score = 310 (114.2 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 59/129 (45%), Positives = 84/129 (65%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
+AT +A YF SG +F HYGLA+ IYTHFTSPIRRYAD++ HR LAA IG +A
Sbjct: 800 MATRCMMSAEYFCSGTQAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAV 859
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNALQ 158
+PS+ + A+C N+N R+R AQ AGRASVA + + +V +EDG+++ + N
Sbjct: 860 HPSVRSRGRLEAVCRNINVRHRNAQLAGRASVAYYVGQSLKGKVAEEDGFIMKIFSNGFV 919
Query: 159 ILIPKSRVQ 167
+ +P+ V+
Sbjct: 920 VYVPRFGVE 928
Score = 95 (38.5 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 4 AMLRRHPVPPPANFEPLLHAAR-RQGFELSVGTGKELATSLD 44
A+LRRH PP NF+ L + + ++GFEL V + + LA SLD
Sbjct: 742 AILRRHGAPPKTNFDELANQLKVKKGFELRVDSSRALADSLD 783
>ASPGD|ASPL0000011287 [details] [associations]
symbol:AN3657 species:162425 "Emericella nidulans"
[GO:0071028 "nuclear mRNA surveillance" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IEA] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IEA]
[GO:0070651 "nonfunctional rRNA decay" evidence=IEA] [GO:0071038
"nuclear polyadenylation-dependent tRNA catabolic process"
evidence=IEA] [GO:0004521 "endoribonuclease activity" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0000176 "nuclear exosome (RNase
complex)" evidence=IEA] [GO:0000177 "cytoplasmic exosome (RNase
complex)" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005730 EMBL:BN001302 EMBL:AACD01000061 GO:GO:0004521
GO:GO:0000049 GO:GO:0071039 GO:GO:0071035 GO:GO:0071038
GO:GO:0000467 GO:GO:0070651 eggNOG:COG0557 HOGENOM:HOG000191945
InterPro:IPR022966 PROSITE:PS01175 KO:K12585 OMA:MPWSITE
OrthoDB:EOG4VHPFH SMART:SM00670 GO:GO:0071028 RefSeq:XP_661261.1
ProteinModelPortal:Q5B723 SMR:Q5B723 STRING:Q5B723
EnsemblFungi:CADANIAT00005078 GeneID:2873078 KEGG:ani:AN3657.2
Uniprot:Q5B723
Length = 1015
Score = 303 (111.7 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 77/218 (35%), Positives = 113/218 (51%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACI---GA 95
LAT +A YF +G +S+F HYGLA+PIYTHFTSPIRRYAD++VHR LAA I G
Sbjct: 782 LATRCMTSAEYFCAGAHAESEFRHYGLASPIYTHFTSPIRRYADLLVHRQLAAAINYEGE 841
Query: 96 D--ATYPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVR 153
D AT + + +C N+NYR+R AQ+AGRAS+ + ++R + +
Sbjct: 842 DGRATIEGSITRNRLEDICRNINYRHRNAQHAGRASIEYYVGQALKARSEK-------LA 894
Query: 154 KNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTYNEKEQS 213
N + I I +EDGYV+ V +N + + +P++G+EG + L E
Sbjct: 895 TNGVDIGI------EEDGYVMRVFENGVVVFVPRFGIEGVVRLEDFVLPSDEALRSVEDR 948
Query: 214 QSCGSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPV 251
+ + FDP L + Q + + L + V
Sbjct: 949 RELVTRRESEFDPEEYTLKVSNKGHQERSVAVELFQRV 986
Score = 98 (39.6 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 4 AMLRRHPVPPPANFEPLLHA-ARRQGFELSVGTGKELATSLD 44
AMLRRH PPP NFE L++ +++ L V + + LA SLD
Sbjct: 724 AMLRRHATPPPQNFEELINQLTKKRDMRLDVSSSRALADSLD 765
>DICTYBASE|DDB_G0293614 [details] [associations]
symbol:DDB_G0293614 "putative exoribonuclease"
species:44689 "Dictyostelium discoideum" [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000176 "nuclear exosome (RNase complex)" evidence=ISS]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
dictyBase:DDB_G0293614 InterPro:IPR006596 GO:GO:0003723
GO:GO:0004540 EMBL:AAFI02000218 GO:GO:0000176 eggNOG:COG0557
InterPro:IPR022966 PROSITE:PS01175 KO:K12585 OMA:MPWSITE
SMART:SM00670 RefSeq:XP_629050.1 ProteinModelPortal:Q54BH9
STRING:Q54BH9 EnsemblProtists:DDB0234145 GeneID:8629340
KEGG:ddi:DDB_G0293614 InParanoid:Q54BH9 ProtClustDB:CLSZ2429248
Uniprot:Q54BH9
Length = 1006
Score = 372 (136.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 91/215 (42%), Positives = 121/215 (56%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
+ T + A YFSSG L DF+HYGLAT IYTHFTSPIRRY DIIVHRLLA+ IG +
Sbjct: 747 MTTRCMSPAKYFSSGSLPYEDFNHYGLATDIYTHFTSPIRRYPDIIVHRLLASAIGIQSV 806
Query: 99 YPSL-LDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNAL 157
SL L+ K +AL N N+R++ AQYA R S LHT +FF+ R ED Y++ V+ NA
Sbjct: 807 --SLNLENKTISALTENNNFRHKMAQYASRGSTQLHTLIFFKGRKSVEDAYIIRVKANAF 864
Query: 158 QILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTYNEKEQSQSCG 217
+L+P+ + G V N+ G GT S + YN ++Q+ G
Sbjct: 865 VVLVPRYGFE---GTVYVSDPNSSTATTNGGG--GT--------SNIYNYNHEDQTLGNG 911
Query: 218 SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVI 252
F FD VTV++ +D S +KL + + P I
Sbjct: 912 IHTFRVFDKVTVEIYVDDSKAHDQKLKINCINPNI 946
>POMBASE|SPBC26H8.10 [details] [associations]
symbol:dis3 "3'-5' exoribonuclease subunit Dis3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=ISO] [GO:0000177 "cytoplasmic
exosome (RNase complex)" evidence=ISO] [GO:0000465 "exonucleolytic
trimming to generate mature 5'-end of 5.8S rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000467 "exonucleolytic trimming to generate mature 3'-end of
5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008536 "Ran GTPase binding" evidence=IPI] [GO:0032853
"positive regulation of Ran GTPase activity" evidence=IMP]
[GO:0034661 "ncRNA catabolic process" evidence=ISO] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=ISO] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=ISO] [GO:0070651 "nonfunctional rRNA decay" evidence=ISO]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=ISO] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=ISO]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=ISO] InterPro:IPR001900 InterPro:IPR003029
Pfam:PF00773 PROSITE:PS50126 SMART:SM00955 PomBase:SPBC26H8.10
InterPro:IPR006596 GO:GO:0051301 GO:GO:0007067 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0040008 GO:GO:0004521
GO:GO:0071035 GO:GO:0071038 GO:GO:0000176 GO:GO:0000175
GO:GO:0000177 GO:GO:0000467 GO:GO:0070651 GO:GO:0071042
GO:GO:0070478 GO:GO:0070481 eggNOG:COG0557 HOGENOM:HOG000191945
InterPro:IPR022966 PROSITE:PS01175 EMBL:M74094 PIR:A41944
RefSeq:NP_596653.1 ProteinModelPortal:P37202 SMR:P37202
STRING:P37202 PRIDE:P37202 EnsemblFungi:SPBC26H8.10.1
GeneID:2540398 KEGG:spo:SPBC26H8.10 KO:K12585 OMA:MPWSITE
OrthoDB:EOG4VHPFH BRENDA:3.1.13.1 NextBio:20801525 GO:GO:0000465
GO:GO:0032853 SMART:SM00670 Uniprot:P37202
Length = 970
Score = 305 (112.4 bits), Expect = 9.0e-32, Sum P(2) = 9.0e-32
Identities = 61/125 (48%), Positives = 76/125 (60%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
L T +A YF SG DF HYGLA+PIYTHFTSPIRRYAD++ HR LAA I +
Sbjct: 773 LTTRCMLSAEYFCSGTFAPPDFRHYGLASPIYTHFTSPIRRYADVLAHRQLAAAIDYETI 832
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNALQ 158
PSL DK +C +NYR+R AQ AGRAS+ + + V +ED YV+ V KN
Sbjct: 833 NPSLSDKSRLIEICNGINYRHRMAQMAGRASIEYYVGQALKGGVAEEDAYVIKVFKNGFV 892
Query: 159 ILIPK 163
+ I +
Sbjct: 893 VFIAR 897
Score = 82 (33.9 bits), Expect = 9.0e-32, Sum P(2) = 9.0e-32
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 4 AMLRRHPVPPPANFEPLLHAARR-QGFELSVGTGKELATSLD 44
A+LRRH PP NF+ L R +G L T K LA SLD
Sbjct: 715 AVLRRHAAPPLTNFDSLQDILRVCKGMHLKCDTSKSLAKSLD 756
>WB|WBGene00001001 [details] [associations]
symbol:dis-3 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
InterPro:IPR006596 GO:GO:0005737 GO:GO:0040010 GO:GO:0005730
GO:GO:0040018 GO:GO:0000003 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 GO:GO:0000178 GO:GO:0004540 GO:GO:0006364
eggNOG:COG0557 HOGENOM:HOG000191945 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 EMBL:Z70718 PIR:T18925 RefSeq:NP_501835.2
ProteinModelPortal:Q17632 SMR:Q17632 STRING:Q17632 PaxDb:Q17632
EnsemblMetazoa:C04G2.6 GeneID:177875 KEGG:cel:CELE_C04G2.6
UCSC:C04G2.6 CTD:177875 WormBase:C04G2.6 InParanoid:Q17632
NextBio:898756 Uniprot:Q17632
Length = 961
Score = 353 (129.3 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 67/125 (53%), Positives = 89/125 (71%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
L T AVYFS+G + + H+GLA IYTHFTSPIRRYAD+IVHRLLAA IGAD
Sbjct: 755 LTTRCMTQAVYFSAGTVPVPQYQHFGLACAIYTHFTSPIRRYADVIVHRLLAAAIGADDI 814
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNALQ 158
LL++ T +C N+NYR++QAQYAGRASV L+ +F+ +V+ +G+V+ VR N +Q
Sbjct: 815 QSGLLNQARCTKICTNINYRHKQAQYAGRASVQLNVVRYFKGKVETCEGFVMGVRNNGIQ 874
Query: 159 ILIPK 163
+ +PK
Sbjct: 875 VFVPK 879
>MGI|MGI:2143272 [details] [associations]
symbol:Dis3l "DIS3 mitotic control homolog (S.
cerevisiae)-like" species:10090 "Mus musculus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=ISO] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016075 "rRNA catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 MGI:MGI:2143272 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177 CTD:115752
eggNOG:COG0557 HOGENOM:HOG000191945 HOVERGEN:HBG059397
OrthoDB:EOG4229HZ InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
EMBL:AK173310 EMBL:AK029974 EMBL:BC056939 IPI:IPI00223964
IPI:IPI00881768 RefSeq:NP_001001295.2 RefSeq:NP_001171255.1
RefSeq:NP_766107.1 UniGene:Mm.268341 ProteinModelPortal:Q8C0S1
SMR:Q8C0S1 STRING:Q8C0S1 PhosphoSite:Q8C0S1 PaxDb:Q8C0S1
PRIDE:Q8C0S1 Ensembl:ENSMUST00000068367 Ensembl:ENSMUST00000113890
Ensembl:ENSMUST00000120760 Ensembl:ENSMUST00000168844 GeneID:213550
KEGG:mmu:213550 UCSC:uc009qbu.2 UCSC:uc009qbw.2
GeneTree:ENSGT00530000063106 InParanoid:Q8C0S1 NextBio:374039
Bgee:Q8C0S1 CleanEx:MM_DIS3L Genevestigator:Q8C0S1 Uniprot:Q8C0S1
Length = 1053
Score = 297 (109.6 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 79/222 (35%), Positives = 119/222 (53%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 96
+ +AT + A+YFS+G + +FHHYGLA YTHFTSPIRRY+DI+VHRLL A I D
Sbjct: 759 RSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKD 818
Query: 97 ATYP---SLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR-VQDE-----DG 147
+L K LC ++N RNR AQ + + S L ++F+ R + E DG
Sbjct: 819 KKMEIKENLFSNKNLEELCRHINNRNRAAQRSQKQSTELFQCMYFKDRDAETEERCIADG 878
Query: 148 YVLYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTY 207
+ +R N + + IP+ ++ G K++L I G EG+ + S+ +
Sbjct: 879 VIYSIRTNGVLVFIPRFGIK---GAAYLKNKDSLVI---SCGPEGSSEWK--PGSLQRSQ 930
Query: 208 NEKEQSQSCG-SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
N+ + + G SV FH FD VTV++S+ S + + L +V
Sbjct: 931 NKIISTTAGGQSVTFHLFDHVTVRISVQASRCHSDTIRLEIV 972
Score = 82 (33.9 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LR+HP P F L A+ +GF + + K LA SLD+A
Sbjct: 704 ALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDSA 746
>UNIPROTKB|F1MEA6 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9913 "Bos
taurus" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0016075
"rRNA catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177
IPI:IPI00701147 InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:DAAA02027893
Ensembl:ENSBTAT00000000481 Uniprot:F1MEA6
Length = 1053
Score = 295 (108.9 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 76/223 (34%), Positives = 115/223 (51%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 96
+ +AT + A+YFS+G + +FHHYGLA YTHFTSPIRRY+DIIVHRLL A I D
Sbjct: 759 RSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKD 818
Query: 97 ATYP---SLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQD------EDG 147
+L K LC ++N RNR AQ++ + S L ++F+ + + DG
Sbjct: 819 KKMEIQENLFSNKDLEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPETEERCISDG 878
Query: 148 YVLYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTY 207
+ +R N + + IP+ ++ Y+R L+ G +G + P +
Sbjct: 879 VIYSIRTNGVLVFIPRFGIKG----AAYLRNK--DGLVVSCGPDGHSEWK---PGSLQRF 929
Query: 208 NEKEQSQSCG--SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
K S + G SV FH FD VTV++S+ S + + L ++
Sbjct: 930 QNKITSTTTGGESVTFHLFDHVTVRISVQTSRCHSDTIRLEII 972
Score = 83 (34.3 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LRRHP P F L A+ +GF + + K LA SLD A
Sbjct: 704 ALLRRHPPPHQEFFSELRECAKAKGFFIDTRSNKALADSLDNA 746
>UNIPROTKB|F1PK78 [details] [associations]
symbol:DIS3L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004540 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:AAEX03016225
Ensembl:ENSCAFT00000027369 Uniprot:F1PK78
Length = 1024
Score = 296 (109.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 82/233 (35%), Positives = 122/233 (52%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHY-GLATPIYTHFTSPIRRYADIIVHRLLAACIGA 95
+ +AT + A+YFS+G + +FHHY GLA YTHFTSPIRRY+DI+VHRLL A I
Sbjct: 728 RSMATQAMSNALYFSTGSCAEEEFHHYEGLALDKYTHFTSPIRRYSDIVVHRLLMAAISK 787
Query: 96 DATYP---SLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYV 152
D +LL K LC ++N RNR AQ++ + S L ++F+ D+D
Sbjct: 788 DKKMEIKDNLLSNKDLEELCRHINNRNRAAQHSQKQSTELFQCMYFK----DKDP----- 838
Query: 153 RKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLR--------CDSPSVS 204
+N + + DG + +R N + + IP++G++G +LR C S S S
Sbjct: 839 -ENEERCI--------SDGVIYSIRTNGVLVFIPRFGIKGAAYLRNKDGLVISCGSDSRS 889
Query: 205 -WT------YNEKEQSQSCG--SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
W + K S + G SV FH FD VTV++S+ S + + L ++
Sbjct: 890 EWKPGSLQRFQNKITSTTTGGESVTFHLFDHVTVRISVQASRCHSDTIRLEII 942
Score = 79 (32.9 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LR+HP P F L A+ +GF + + K LA SLD A
Sbjct: 673 ALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNA 715
>RGD|1308959 [details] [associations]
symbol:Dis3l "DIS3 mitotic control homolog (S. cerevisiae)-like"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO;ISS] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=ISO;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0016075 "rRNA catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=IEA;ISO]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 RGD:1308959
GO:GO:0005886 GO:GO:0005813 GO:GO:0003723 GO:GO:0016075
GO:GO:0000175 GO:GO:0000177 CTD:115752 eggNOG:COG0557
HOGENOM:HOG000191945 HOVERGEN:HBG059397 OrthoDB:EOG4229HZ
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
EMBL:BC085932 IPI:IPI00366657 RefSeq:NP_001008381.1
UniGene:Rn.24884 ProteinModelPortal:Q5U2P0 STRING:Q5U2P0
PRIDE:Q5U2P0 Ensembl:ENSRNOT00000014071 GeneID:363077
KEGG:rno:363077 UCSC:RGD:1308959 InParanoid:Q5U2P0 NextBio:682358
Genevestigator:Q5U2P0 Uniprot:Q5U2P0
Length = 1054
Score = 293 (108.2 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 78/222 (35%), Positives = 117/222 (52%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 96
+ +AT + A+YFS+G + +FHHYGLA YTHFTSPIRRY+DI+VHRLL A I D
Sbjct: 759 RSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKD 818
Query: 97 ATYP---SLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDE------DG 147
+L K LC ++N RNR AQ + + S L ++F+ R + DG
Sbjct: 819 KKVEIKENLFSNKNLEELCRHINNRNRAAQRSQKQSTELFQCMYFKDRDPETEERCVVDG 878
Query: 148 YVLYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTY 207
+ +R N + + IP+ ++ G K+ L I G EG+ + S+ +
Sbjct: 879 IIYSIRTNGVLVFIPRFGIK---GAAYLKNKDGLVI---SCGPEGSSEWK--PGSLQRSQ 930
Query: 208 NEKEQSQSCG-SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
N+ + + G SV FH FD VTV++S+ S + + L +V
Sbjct: 931 NKIISTTAGGQSVTFHLFDHVTVRISVQPSRCHSDMIRLEIV 972
Score = 82 (33.9 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LR+HP P F L A+ +GF + + K LA SLD+A
Sbjct: 704 ALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDSA 746
>UNIPROTKB|A0JN80 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9913 "Bos
taurus" [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0000175
GO:GO:0000177 EMBL:BC126555 IPI:IPI00701147 RefSeq:NP_001071624.1
UniGene:Bt.10856 ProteinModelPortal:A0JN80 STRING:A0JN80
PRIDE:A0JN80 GeneID:777771 KEGG:bta:777771 CTD:115752
eggNOG:COG0557 HOGENOM:HOG000191945 HOVERGEN:HBG059397
InParanoid:A0JN80 OrthoDB:EOG4229HZ NextBio:20924325
InterPro:IPR022966 PROSITE:PS01175 Uniprot:A0JN80
Length = 1053
Score = 290 (107.1 bits), Expect = 3.7e-30, Sum P(2) = 3.7e-30
Identities = 75/223 (33%), Positives = 114/223 (51%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 96
+ +AT + A+YFS+G + +FHHYGLA YTHFTSPIRRY+DIIVHRLL A I D
Sbjct: 759 RSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKD 818
Query: 97 ATYP---SLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQD------EDG 147
+L K LC ++N RNR AQ++ + S L ++F+ + + DG
Sbjct: 819 KKMEIQENLFSNKDLEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPETEERCISDG 878
Query: 148 YVLYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTY 207
+ +R N + + IP+ ++ Y+R L+ G +G + P +
Sbjct: 879 VIYSIRTNGVLVFIPRFGIKG----AAYLRNK--DGLVVSCGPDGHSEWK---PGSLQRF 929
Query: 208 NEKEQSQSCG--SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
K + G SV FH FD VTV++S+ S + + L ++
Sbjct: 930 QNKITCTTTGGESVTFHLFDHVTVRISVQTSRCHSDTIRLEII 972
Score = 83 (34.3 bits), Expect = 3.7e-30, Sum P(2) = 3.7e-30
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LRRHP P F L A+ +GF + + K LA SLD A
Sbjct: 704 ALLRRHPPPHQEFFSELRECAKAKGFFIDTRSNKALADSLDNA 746
>UNIPROTKB|F1SJJ9 [details] [associations]
symbol:DIS3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
EMBL:CU062652 Ensembl:ENSSSCT00000005453 Uniprot:F1SJJ9
Length = 1057
Score = 293 (108.2 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 76/224 (33%), Positives = 113/224 (50%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 96
+ +AT + A+YFS+G + +FHHYGLA YTHFTSPIRRY+DIIVHRLL I D
Sbjct: 762 RSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMEAISKD 821
Query: 97 ATYP---SLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQD------EDG 147
+L K LC ++N RNR AQ+ + S L ++F+ + D DG
Sbjct: 822 KKMEIKENLFSNKDLEELCKHINNRNRAAQHCQKQSTELFQCMYFKDKDPDTEERCISDG 881
Query: 148 YVLYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCD-SPSVSWT 206
+ +R N + + IP+ ++ G K+ L I G + C+ P
Sbjct: 882 VIYSIRTNGVLVFIPRFGIK---GAAYLKNKDGLVI---SCGQDS----HCEWKPGSLQR 931
Query: 207 YNEKEQSQSCG--SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
+ K S + G SV FH FD +TV++S+ S + + L ++
Sbjct: 932 FQNKITSTTTGGESVTFHLFDHITVRISVQASRCHADTIRLEII 975
Score = 79 (32.9 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LR+HP P F L A+ +GF + + K LA SLD A
Sbjct: 707 ALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNA 749
>UNIPROTKB|I3LEH1 [details] [associations]
symbol:DIS3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0016075
"rRNA catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177
InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:CU062652
Ensembl:ENSSSCT00000024119 Uniprot:I3LEH1
Length = 1059
Score = 293 (108.2 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 76/224 (33%), Positives = 113/224 (50%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 96
+ +AT + A+YFS+G + +FHHYGLA YTHFTSPIRRY+DIIVHRLL I D
Sbjct: 764 RSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMEAISKD 823
Query: 97 ATYP---SLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQD------EDG 147
+L K LC ++N RNR AQ+ + S L ++F+ + D DG
Sbjct: 824 KKMEIKENLFSNKDLEELCKHINNRNRAAQHCQKQSTELFQCMYFKDKDPDTEERCISDG 883
Query: 148 YVLYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCD-SPSVSWT 206
+ +R N + + IP+ ++ G K+ L I G + C+ P
Sbjct: 884 VIYSIRTNGVLVFIPRFGIK---GAAYLKNKDGLVI---SCGQDS----HCEWKPGSLQR 933
Query: 207 YNEKEQSQSCG--SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
+ K S + G SV FH FD +TV++S+ S + + L ++
Sbjct: 934 FQNKITSTTTGGESVTFHLFDHITVRISVQASRCHADTIRLEII 977
Score = 79 (32.9 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LR+HP P F L A+ +GF + + K LA SLD A
Sbjct: 709 ALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNA 751
>SGD|S000005381 [details] [associations]
symbol:DIS3 "Exosome core complex catalytic subunit"
species:4932 "Saccharomyces cerevisiae" [GO:0000467 "exonucleolytic
trimming to generate mature 3'-end of 5.8S rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IC] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IDA] [GO:0000177 "cytoplasmic exosome (RNase complex)"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IMP;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0071028 "nuclear mRNA surveillance" evidence=IMP]
[GO:0070651 "nonfunctional rRNA decay" evidence=IMP] [GO:0004521
"endoribonuclease activity" evidence=IMP;IDA] [GO:0000178 "exosome
(RNase complex)" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016075 "rRNA
catabolic process" evidence=IMP] [GO:0071035 "nuclear
polyadenylation-dependent rRNA catabolic process" evidence=IMP]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IGI;IMP;IDA] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IMP]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0000049 "tRNA
binding" evidence=IDA;IMP] [GO:0070481 "nuclear-transcribed mRNA
catabolic process, non-stop decay" evidence=IC] [GO:0043628 "ncRNA
3'-end processing" evidence=IMP] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IC]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IC]
InterPro:IPR001900 InterPro:IPR003029 Pfam:PF00773 PROSITE:PS50126
SMART:SM00955 SGD:S000005381 InterPro:IPR006596 GO:GO:0005739
GO:GO:0005730 EMBL:BK006948 GO:GO:0004521 GO:GO:0000049
GO:GO:0071039 GO:GO:0071035 GO:GO:0071038 GO:GO:0000176
GO:GO:0000175 GO:GO:0000177 GO:GO:0000467 GO:GO:0070651
GO:GO:0071042 GO:GO:0070478 GO:GO:0070481 InterPro:IPR022967
SMART:SM00316 GO:GO:0071051 eggNOG:COG0557 HOGENOM:HOG000191945
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
KO:K12585 OMA:MPWSITE OrthoDB:EOG4VHPFH SMART:SM00670 GO:GO:0071028
PDB:2WP8 PDBsum:2WP8 EMBL:D76430 EMBL:Z74763 PIR:S66704
RefSeq:NP_014621.1 PDB:2VNU PDBsum:2VNU ProteinModelPortal:Q08162
SMR:Q08162 DIP:DIP-2355N IntAct:Q08162 MINT:MINT-614156
STRING:Q08162 PaxDb:Q08162 PeptideAtlas:Q08162 EnsemblFungi:YOL021C
GeneID:854138 KEGG:sce:YOL021C CYGD:YOL021c
EvolutionaryTrace:Q08162 NextBio:975871 Genevestigator:Q08162
GermOnline:YOL021C Uniprot:Q08162
Length = 1001
Score = 286 (105.7 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 57/129 (44%), Positives = 76/129 (58%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
++T AA YF SG DF HYGLA IYTHFTSPIRRY D++ HR LA IG +
Sbjct: 808 MSTRCMMAAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPL 867
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNALQ 158
+ DK +C N+N ++R AQ+AGRAS+ + R+ E GYV+ V N +
Sbjct: 868 SLTHRDKNKMDMICRNINRKHRNAQFAGRASIEYYVGQVMRNNESTETGYVIKVFNNGIV 927
Query: 159 ILIPKSRVQ 167
+L+PK V+
Sbjct: 928 VLVPKFGVE 936
Score = 84 (34.6 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 4 AMLRRHPVPPPANFEPLLHAAR-RQGFELSVGTGKELATSLD 44
AMLRRH PP NFE L R+ +S+ + K LA SLD
Sbjct: 750 AMLRRHAAPPSTNFEILNEMLNTRKNMSISLESSKALADSLD 791
>CGD|CAL0003527 [details] [associations]
symbol:orf19.5229 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000176 "nuclear exosome (RNase
complex)" evidence=IEA] [GO:0000177 "cytoplasmic exosome (RNase
complex)" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=IEA] [GO:0071028 "nuclear mRNA surveillance"
evidence=IEA] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0071035 "nuclear
polyadenylation-dependent rRNA catabolic process" evidence=IEA]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IEA] [GO:0070651 "nonfunctional rRNA decay"
evidence=IEA] [GO:0071038 "nuclear polyadenylation-dependent tRNA
catabolic process" evidence=IEA] InterPro:IPR001900
InterPro:IPR003029 Pfam:PF00773 PROSITE:PS50126 SMART:SM00955
CGD:CAL0003527 InterPro:IPR006596 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 KO:K12585 SMART:SM00670 EMBL:AACQ01000070
EMBL:AACQ01000071 RefSeq:XP_716298.1 RefSeq:XP_716360.1
ProteinModelPortal:Q5A3P1 SMR:Q5A3P1 STRING:Q5A3P1 GeneID:3641956
GeneID:3642063 KEGG:cal:CaO19.12694 KEGG:cal:CaO19.5229
Uniprot:Q5A3P1
Length = 1004
Score = 271 (100.5 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 53/129 (41%), Positives = 76/129 (58%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
++T AA YF SG +F HYGLA IYTHFTSPIRRY D++ HR LA IG +
Sbjct: 813 MSTRCMMAAEYFPSGSYGYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENL 872
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNALQ 158
S DK + N+N R+R AQ+AGR+S+ + R+ + +GY++ + N +
Sbjct: 873 DLSHRDKSKMEMIVRNINKRHRNAQFAGRSSIEYYVGQVMRNNESEHEGYIIKIFNNGIV 932
Query: 159 ILIPKSRVQ 167
+L+PK V+
Sbjct: 933 VLVPKFGVE 941
Score = 93 (37.8 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 4 AMLRRHPVPPPANFEPL--LHAARRQGFELSVGTGKELATSLD 44
AMLRRH PP NFE L + R+ G +S+ + K LA SLD
Sbjct: 754 AMLRRHAAPPATNFETLNDMLNVRKNGMSISLESSKALADSLD 796
>UNIPROTKB|Q8TF46 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP;IDA] [GO:0016075
"rRNA catabolic process" evidence=IMP;IDA] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0005886
GO:GO:0005813 GO:GO:0003723 GO:GO:0016075 EMBL:CH471082
GO:GO:0000175 GO:GO:0000177 CTD:115752 eggNOG:COG0557
HOGENOM:HOG000191945 HOVERGEN:HBG059397 InterPro:IPR022966
PROSITE:PS01175 EMBL:AB075835 EMBL:AK095407 EMBL:AC055855
EMBL:BC014124 EMBL:BC022089 IPI:IPI00291003 IPI:IPI00295876
IPI:IPI00879677 IPI:IPI00879828 RefSeq:NP_001137160.1
RefSeq:NP_588616.1 UniGene:Hs.446251 ProteinModelPortal:Q8TF46
SMR:Q8TF46 IntAct:Q8TF46 STRING:Q8TF46 PhosphoSite:Q8TF46
DMDM:166201903 PaxDb:Q8TF46 PeptideAtlas:Q8TF46 PRIDE:Q8TF46
DNASU:115752 Ensembl:ENST00000319194 Ensembl:ENST00000319212
GeneID:115752 KEGG:hsa:115752 UCSC:uc002app.3 UCSC:uc002apq.2
GeneCards:GC15P066585 HGNC:HGNC:28698 HPA:HPA041805 MIM:614183
neXtProt:NX_Q8TF46 PharmGKB:PA162383675 InParanoid:Q8TF46
OMA:IPRFGIK ChiTaRS:DIS3L GenomeRNAi:115752 NextBio:79674
ArrayExpress:Q8TF46 Bgee:Q8TF46 CleanEx:HS_DIS3L
Genevestigator:Q8TF46 Uniprot:Q8TF46
Length = 1054
Score = 280 (103.6 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 74/222 (33%), Positives = 116/222 (52%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 96
+ +AT + A+YFS+G + +FHHYGLA YTHFTSPIRRY+DI+VHRLL A I D
Sbjct: 759 RSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKD 818
Query: 97 ATYP---SLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR--VQDE----DG 147
+L K LC ++N RN+ AQ++ + S L ++F+ + +E DG
Sbjct: 819 KKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYFKDKDPATEERCISDG 878
Query: 148 YVLYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTY 207
+ +R N + + IP+ ++ G K+ L I G + + S+
Sbjct: 879 VIYSIRTNGVLLFIPRFGIK---GAAYLKNKDGLVI---SCGPDSCSEWK--PGSLQRFQ 930
Query: 208 NEKEQSQSCG-SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
N+ + + G SV FH FD VTV++S+ S + + L ++
Sbjct: 931 NKITSTTTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEII 972
Score = 79 (32.9 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LR+HP P F L A+ +GF + + K LA SLD A
Sbjct: 704 ALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNA 746
>UNIPROTKB|Q5R5N8 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9601 "Pongo
abelii" [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0003723
GO:GO:0000175 GO:GO:0000177 CTD:115752 HOGENOM:HOG000191945
HOVERGEN:HBG059397 InterPro:IPR022966 PROSITE:PS01175 EMBL:CR860819
RefSeq:NP_001126723.1 UniGene:Pab.8044 ProteinModelPortal:Q5R5N8
GeneID:100173724 KEGG:pon:100173724 Uniprot:Q5R5N8
Length = 1054
Score = 280 (103.6 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 75/222 (33%), Positives = 115/222 (51%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 96
+ +AT + A+YFS+G + +FHHYGLA YTHFTSPIRRY+DI+VHRLL A I D
Sbjct: 759 RSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKD 818
Query: 97 ATYP---SLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSR--VQDE----DG 147
+L K LC ++N RNR AQ++ + S L ++F+ + +E DG
Sbjct: 819 KKMEIKGNLFSNKDLEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPATEERCISDG 878
Query: 148 YVLYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTY 207
+ +R N + + IP+ ++ G K+ L I G + + S+
Sbjct: 879 VIYSIRANGVLVFIPRFGIK---GAAYLKNKDGLVI---SCGPDSCSEWK--PGSLQRFQ 930
Query: 208 NEKEQSQSCG-SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
N+ + + G SV FH FD VTV++S+ S + L ++
Sbjct: 931 NKITSTTTDGESVTFHLFDHVTVRISIQVSRCHSDTTRLEII 972
Score = 79 (32.9 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LR+HP P F L A+ +GF + + K LA SLD A
Sbjct: 704 ALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNA 746
>ZFIN|ZDB-GENE-070209-95 [details] [associations]
symbol:dis3l "DIS3 mitotic control homolog (S.
cerevisiae)-like" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase complex)"
evidence=ISS] [GO:0000178 "exosome (RNase complex)" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
ZFIN:ZDB-GENE-070209-95 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:CABZ01003662 IPI:IPI00493157
ProteinModelPortal:F1Q9I9 Ensembl:ENSDART00000075176 Bgee:F1Q9I9
Uniprot:F1Q9I9
Length = 1057
Score = 266 (98.7 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 75/221 (33%), Positives = 119/221 (53%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
+AT + A+YFS+G + ++HYGLA YTHFTSPIRRYAD+IVHRLL A + +
Sbjct: 753 MATQAMSNALYFSTGSCPEEQYYHYGLALARYTHFTSPIRRYADVIVHRLLMAAVQLEKD 812
Query: 99 Y-PS--LLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQ--DE----DGYV 149
PS L K L ++N +NR AQ++ + S+ L ++FR + DE D +
Sbjct: 813 ESPSKTLACNKELEELAQHINNKNRAAQHSQKQSIELFQCMYFRDKDSHTDERCVADAVI 872
Query: 150 LYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCD-SPSVSWTYN 208
VR N +P+ ++ G V Y++ Q++ ++G +C+ P Y+
Sbjct: 873 YAVRANGFLAFVPQYGLK---GAV-YLKDREGQVI----SVDGDG--KCEWKPGTLQKYS 922
Query: 209 EKE-QSQSCGSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV 248
+K S S G+ F+ F+ VTV++S++ S + L L L+
Sbjct: 923 DKIITSTSTGTHTFYLFNHVTVRISVEPSRCHADSLNLELI 963
Score = 79 (32.9 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 3 NAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
+A+LR HP P F L+ +A+ GF + + + LA SL+ A
Sbjct: 695 HALLRHHPPPKQEFFNHLIDSAKAHGFSIDTRSNRALADSLERA 738
>UNIPROTKB|Q0P4R5 [details] [associations]
symbol:dis3l "DIS3-like exonuclease 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase
complex)" evidence=ISS] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0003723 GO:GO:0000175 GO:GO:0000177 CTD:115752
eggNOG:COG0557 HOGENOM:HOG000191945 HOVERGEN:HBG059397
InterPro:IPR022966 PROSITE:PS01175 EMBL:BC121935
RefSeq:NP_001072835.1 UniGene:Str.52789 ProteinModelPortal:Q0P4R5
STRING:Q0P4R5 GeneID:780296 KEGG:xtr:780296 Xenbase:XB-GENE-1013178
Uniprot:Q0P4R5
Length = 1039
Score = 260 (96.6 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 75/223 (33%), Positives = 114/223 (51%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
+AT + A YFS+G + +F+HYGLA YTHFTSPIRRYADI+VHRLL A +
Sbjct: 752 MATQAMSNARYFSTGSYTEDEFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAVNKGPK 811
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDED-----GYVLY-V 152
+LL K LC ++N RNR AQ+ + S L +FF+ + D D V+Y +
Sbjct: 812 -DNLLGNKDLEELCRHINVRNRAAQHCQKQSTELFQCMFFKDKDPDSDQRCISDAVIYGI 870
Query: 153 RKNALQILIPK------SRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWT 206
R N + + +P+ + +++ DG VL + N +P G+L D V+
Sbjct: 871 RTNGVLLFLPRYGIKGAAYLKNIDGLVLACKDNGRCHWMP-----GSLQRLPDRIVVT-- 923
Query: 207 YNEKEQSQSCGSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVR 249
+Q S + FD VTV++ + S + + L ++R
Sbjct: 924 ------TQEAKSFSYCLFDHVTVRIHVQSSRFHPDSIRLEIIR 960
Score = 75 (31.5 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 3 NAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
+A+LR HP F+ L A+ +GF + + K LA SLD A
Sbjct: 694 HALLRLHPPARQEFFQELKECAKARGFSIDTRSNKALADSLDQA 737
>UNIPROTKB|Q6GN11 [details] [associations]
symbol:dis3l "DIS3-like exonuclease 1" species:8355
"Xenopus laevis" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase complex)"
evidence=ISS] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
GO:GO:0003723 GO:GO:0000175 GO:GO:0000177 CTD:115752
HOVERGEN:HBG059397 InterPro:IPR022966 PROSITE:PS01175 EMBL:BC073711
RefSeq:NP_001086021.1 UniGene:Xl.3437 ProteinModelPortal:Q6GN11
GeneID:444450 KEGG:xla:444450 Xenbase:XB-GENE-1013183
Uniprot:Q6GN11
Length = 1040
Score = 251 (93.4 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 76/224 (33%), Positives = 110/224 (49%)
Query: 39 LATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT 98
+AT + A YFS+G + +F+HYGLA YTHFTSPIRRYADI+VHRLL A +
Sbjct: 753 MATQAMSNARYFSTGSYTEDEFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAVNKGPK 812
Query: 99 YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDED-----GYVLY-V 152
LL K LC ++N RNR AQ + S L +FF+ + D D V+Y +
Sbjct: 813 -DHLLGNKDLEELCRHINARNRAAQQCQKQSTELFQCMFFKDKDPDSDQRCISDAVIYGI 871
Query: 153 RKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYG----LEGTLFLRCDSPSVSWTYN 208
R N + + IP+ ++ G + L + + G + G+L R + V T
Sbjct: 872 RTNGVLLFIPRYGIK---GAAYLKNTDGLVLACEEDGQCRWVHGSL-QRLPAQIVVTTQE 927
Query: 209 EKEQSQSCGSVVFHSFDPVTVQLSLDRSNVQHEKLVLRLV--RP 250
K S F FD VTV++ + S + + L ++ RP
Sbjct: 928 AKSFS-------FCLFDHVTVRIRIQSSRFHPDSIRLEIISNRP 964
Score = 83 (34.3 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 3 NAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
+A+LR HP P F+ L A+ +GF + + K LA SLD A
Sbjct: 695 HALLRLHPPPRQEFFQELKECAKARGFSIDTRSNKALADSLDQA 738
>UNIPROTKB|F1NKN5 [details] [associations]
symbol:LOC100857630 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016075 "rRNA catabolic process" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177
InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:AADN02038918 EMBL:AADN02038919
EMBL:AADN02038920 IPI:IPI00571818 Ensembl:ENSGALT00000012364
Uniprot:F1NKN5
Length = 1082
Score = 250 (93.1 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 69/222 (31%), Positives = 110/222 (49%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 96
+ +AT + A+YFS+G + +FHHYGLA YTHFTSPIRRYADIIVHRLL A +
Sbjct: 784 RSMATQAMSNALYFSTGSCSEEEFHHYGLALDKYTHFTSPIRRYADIIVHRLLMAAFRKE 843
Query: 97 AT--YPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQ--DE----DGY 148
L K ++N RNR AQ+A + S L ++F+ + DE DG
Sbjct: 844 TKDLKDKLFSNKDLEDPRKHINNRNRAAQHAQKQSTELFQCMYFKDKSPETDERCIADGV 903
Query: 149 VLYVRKNALQILIPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTYN 208
+ +R N + + +P+ ++ Y+ KN +++ +G S+ N
Sbjct: 904 IYSIRTNGVLVFVPRYGIKGA-AYM----KNKEGLVL---SCQGERSCEWKPGSLQRFQN 955
Query: 209 EKEQSQSCG-SVVFHSFDPVTVQLSLDRSNVQHEKLVLRLVR 249
+ + G SV FD +TV++ + S + + L +++
Sbjct: 956 RITSTTTTGESVTLSLFDHITVKILVQTSRCHADTIKLEIIK 997
Score = 78 (32.5 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAA 46
A+LR+HP P F L A +GF + + K LA SLD A
Sbjct: 729 ALLRQHPPPRQEFFTDLQECASAKGFAIDTRSNKALAESLDKA 771
Score = 37 (18.1 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 17 FEPLLHAARRQGFELSVGTGKE 38
F+ +L A R + E GKE
Sbjct: 228 FDSILQARREREIESQENNGKE 249
>DICTYBASE|DDB_G0268186 [details] [associations]
symbol:DDB_G0268186 species:44689 "Dictyostelium
discoideum" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 dictyBase:DDB_G0268186 EMBL:AAFI02000003
GO:GO:0003723 GO:GO:0004540 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 RefSeq:XP_647622.1 EnsemblProtists:DDB0189843
GeneID:8616436 KEGG:ddi:DDB_G0268186 InParanoid:Q55FB1 OMA:YMILANS
Uniprot:Q55FB1
Length = 1504
Score = 206 (77.6 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 57/157 (36%), Positives = 77/157 (49%)
Query: 47 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKK 106
AVYFS+G + S+F+HYGLA YTHFTSPIRRY+DIIVHR L + K
Sbjct: 1026 AVYFSTGSVNVSEFYHYGLAIDKYTHFTSPIRRYSDIIVHRQLWNSLNQSN------GKF 1079
Query: 107 ASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQ---DEDGYVLYVRKNALQILIPK 163
+ + N N Q+ Y + L HL R+R D L+ ++ L PK
Sbjct: 1080 GGKSSIIDNNNNNDQSSYDNFSITQLTDHLNIRNRASKTVQRDATELF--QSLYFKLFPK 1137
Query: 164 SRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDS 200
V + +R N IP++GL +FL+ DS
Sbjct: 1138 ENVL---AIITDIRSNGFVCFIPEFGLRSRVFLKKDS 1171
Score = 73 (30.8 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 3 NAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLDAAAV 48
+A+LRRHP P +F+ + GF+L T K+L SL A+AV
Sbjct: 959 SALLRRHPKPNQIDFKSIKSYFSYCGFQLLTKTNKQLQESL-ASAV 1003
>FB|FBgn0035111 [details] [associations]
symbol:CG16940 species:7227 "Drosophila melanogaster"
[GO:0000176 "nuclear exosome (RNase complex)" evidence=ISS]
[GO:0008859 "exoribonuclease II activity" evidence=ISS] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=ISS] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 EMBL:AE014296 GO:GO:0003723 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 GO:GO:0008859
EMBL:BT044564 RefSeq:NP_728490.1 UniGene:Dm.29548 SMR:Q8IRJ7
EnsemblMetazoa:FBtr0072486 GeneID:38034 KEGG:dme:Dmel_CG16940
UCSC:CG16940-RC FlyBase:FBgn0035111 InParanoid:Q8IRJ7 OMA:LESGHVI
OrthoDB:EOG46M912 GenomeRNAi:38034 NextBio:806667 Uniprot:Q8IRJ7
Length = 1044
Score = 201 (75.8 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 55/154 (35%), Positives = 80/154 (51%)
Query: 45 AAAVYF-SSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 103
A A YF S G + +D HY L+ PIYTHFTSPIRRY DI+VHRLLAA + T P
Sbjct: 860 ARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALKY-CTPPKRT 918
Query: 104 DKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNALQILIPK 163
T L N R A+ AG S +L+F+ V ++ G +Y+R ++I
Sbjct: 919 PDDLHT-LTKLANERKYNAKKAGEDS----GNLYFKRYVHNKQG--IYMRAVVIEIFQHM 971
Query: 164 SRVQD-EDGYVLYVRKNALQILIPKYGLEGTLFL 196
V E G+V+ + ++L+ +G+ + +
Sbjct: 972 MNVVTLESGHVISINYKMQKVLVDTHGVPNYILI 1005
Score = 59 (25.8 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
D A+LR HP P + + L GFEL + K L S+
Sbjct: 793 DIAVLRNHPPPLIKSLKALREKLLALGFELDYSSSKALQESM 834
>RGD|1560168 [details] [associations]
symbol:Dis3l2 "DIS3 mitotic control homolog (S. cerevisiae)-like
2" species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007067 "mitosis"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0051306 "mitotic sister chromatid
separation" evidence=ISO] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 RGD:1560168 GO:GO:0005737 GO:GO:0008285 GO:GO:0003723
GO:GO:0004540 GO:GO:0051306 InterPro:IPR022966 PROSITE:PS01175
OrthoDB:EOG415GCR IPI:IPI00950040 Ensembl:ENSRNOT00000066216
UCSC:RGD:1560168 ArrayExpress:D3ZWJ4 Uniprot:D3ZWJ4
Length = 884
Score = 200 (75.5 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 50/126 (39%), Positives = 70/126 (55%)
Query: 47 AVYFSSGMLQ-QSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADA---TYPSL 102
A+YF SGMLQ Q+ F HY L P+YTHFTSPIRR+AD+IVHRLLAA +G P
Sbjct: 684 ALYFCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALGYSEQPDVEPDA 743
Query: 103 LDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFR-SRVQDEDGYVLYVRKNALQILI 161
L K+A C + +++ Q S+ L + + S + + V+ V A +L+
Sbjct: 744 LQKQADH--CNDRRMASKRVQ---ELSIGLFFSILVKESGPLESEAMVMGVLNQAFDVLV 798
Query: 162 PKSRVQ 167
+ VQ
Sbjct: 799 LRFGVQ 804
Score = 56 (24.8 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
+ A+LRRHP P L+ + G + V + L SL
Sbjct: 615 EQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSL 656
>UNIPROTKB|E2QZ40 [details] [associations]
symbol:DIS3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051306 "mitotic sister chromatid separation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0005737 GO:GO:0008285 GO:GO:0003723
GO:GO:0004540 GO:GO:0051306 InterPro:IPR022966 PROSITE:PS01175
Ensembl:ENSCAFT00000017770 Uniprot:E2QZ40
Length = 870
Score = 202 (76.2 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
Identities = 70/214 (32%), Positives = 103/214 (48%)
Query: 47 AVYFSSGMLQ-QSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK 105
A+YF SG+LQ Q+ F HY L P+YTHFTSPIRR+AD++VHRLLAA +G Y L D
Sbjct: 670 ALYFCSGVLQDQAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG----YRELPDM 725
Query: 106 KASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDE-----DGYVLYVRKNALQIL 160
+ T L ++ N + + R L T LFF V++ + VL V A +L
Sbjct: 726 EPDT-LQKQADHCNDRRMASKRVQ-ELSTGLFFAILVKESGPLESEAMVLGVLNQAFDVL 783
Query: 161 IPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTYNEKEQSQSCGSVV 220
+ + VQ +Y NAL + + G P ++ + ++ Q V
Sbjct: 784 VLRYGVQKR----IYC--NALPLRSHHFQRVGK------KPELTLVWEPEDMEQEPVRQV 831
Query: 221 FHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEG 254
F V V L + + +++ + L RP EG
Sbjct: 832 VTIFSLVEVVLQAETTALKYSAI---LKRPGTEG 862
Score = 52 (23.4 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
+ A+LRRHP P L+ + G + + L SL
Sbjct: 601 ERALLRRHPPPQTKMLNDLMEFCDQMGLPMDFSSAGALNKSL 642
>UNIPROTKB|F6XKS7 [details] [associations]
symbol:DIS3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
CTD:129563 OMA:VQKRVYC EMBL:AAEX03014445 Ensembl:ENSCAFT00000017770
EMBL:AAEX03014441 EMBL:AAEX03014442 EMBL:AAEX03014443
EMBL:AAEX03014444 RefSeq:XP_852722.1 ProteinModelPortal:F6XKS7
GeneID:610194 KEGG:cfa:610194 Uniprot:F6XKS7
Length = 879
Score = 202 (76.2 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 70/214 (32%), Positives = 103/214 (48%)
Query: 47 AVYFSSGMLQ-QSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK 105
A+YF SG+LQ Q+ F HY L P+YTHFTSPIRR+AD++VHRLLAA +G Y L D
Sbjct: 670 ALYFCSGVLQDQAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG----YRELPDM 725
Query: 106 KASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDE-----DGYVLYVRKNALQIL 160
+ T L ++ N + + R L T LFF V++ + VL V A +L
Sbjct: 726 EPDT-LQKQADHCNDRRMASKRVQ-ELSTGLFFAILVKESGPLESEAMVLGVLNQAFDVL 783
Query: 161 IPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTYNEKEQSQSCGSVV 220
+ + VQ +Y NAL + + G P ++ + ++ Q V
Sbjct: 784 VLRYGVQKR----IYC--NALPLRSHHFQRVGK------KPELTLVWEPEDMEQEPVRQV 831
Query: 221 FHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEG 254
F V V L + + +++ + L RP EG
Sbjct: 832 VTIFSLVEVVLQAETTALKYSAI---LKRPGTEG 862
Score = 52 (23.4 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
+ A+LRRHP P L+ + G + + L SL
Sbjct: 601 ERALLRRHPPPQTKMLNDLMEFCDQMGLPMDFSSAGALNKSL 642
>MGI|MGI:2442555 [details] [associations]
symbol:Dis3l2 "DIS3 mitotic control homolog (S.
cerevisiae)-like 2" species:10090 "Mus musculus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051306 "mitotic sister chromatid separation"
evidence=ISO] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
MGI:MGI:2442555 GO:GO:0005737 GO:GO:0008285 GO:GO:0051301
GO:GO:0003723 GO:GO:0004527 GO:GO:0004540 GO:GO:0051306
eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 CTD:129563 HOVERGEN:HBG107810
EMBL:AK031180 EMBL:BC036177 IPI:IPI00229771 IPI:IPI00881442
RefSeq:NP_001165628.1 RefSeq:NP_705758.1 UniGene:Mm.389152
ProteinModelPortal:Q8CI75 SMR:Q8CI75 STRING:Q8CI75
PhosphoSite:Q8CI75 PaxDb:Q8CI75 PRIDE:Q8CI75
Ensembl:ENSMUST00000065694 Ensembl:ENSMUST00000168237 GeneID:208718
KEGG:mmu:208718 UCSC:uc007bvu.2 UCSC:uc007bvv.2
HOGENOM:HOG000017705 InParanoid:Q8CI75 OMA:VQKRVYC
OrthoDB:EOG415GCR NextBio:372395 Bgee:Q8CI75 Genevestigator:Q8CI75
Uniprot:Q8CI75
Length = 870
Score = 197 (74.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 50/126 (39%), Positives = 69/126 (54%)
Query: 47 AVYFSSGMLQ-QSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADA---TYPSL 102
A+YF SGMLQ Q F HY L P+YTHFTSPIRR+AD+IVHRLLAA +G P
Sbjct: 670 ALYFCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALGYSEQPDVEPDT 729
Query: 103 LDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFR-SRVQDEDGYVLYVRKNALQILI 161
L K+A C + +++ Q S+ L + + S + + V+ V A +L+
Sbjct: 730 LQKQADH--CNDRRMASKRVQ---ELSIGLFFAVLVKESGPLESEAMVMGVLNQAFDVLV 784
Query: 162 PKSRVQ 167
+ VQ
Sbjct: 785 LRFGVQ 790
Score = 56 (24.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
+ A+LRRHP P L+ + G + V + L SL
Sbjct: 601 EQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSL 642
>UNIPROTKB|Q8IYB7 [details] [associations]
symbol:DIS3L2 "DIS3-like exonuclease 2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0051306 "mitotic sister
chromatid separation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0005737 GO:GO:0008285 GO:GO:0051301
GO:GO:0003723 GO:GO:0004527 GO:GO:0004540 Orphanet:654
GO:GO:0051306 eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
EMBL:AK094293 EMBL:AL834174 EMBL:BX648325 EMBL:AF443854
EMBL:AC019130 EMBL:AC068134 EMBL:AC093374 EMBL:AC138658
EMBL:BC026166 EMBL:BC036113 IPI:IPI00167753 IPI:IPI00217752
IPI:IPI00385160 IPI:IPI00465384 IPI:IPI00880048
RefSeq:NP_001244210.1 RefSeq:NP_001244211.1 RefSeq:NP_689596.4
UniGene:Hs.732236 ProteinModelPortal:Q8IYB7 IntAct:Q8IYB7
MINT:MINT-1386910 STRING:Q8IYB7 PhosphoSite:Q8IYB7 DMDM:296439471
PaxDb:Q8IYB7 PRIDE:Q8IYB7 DNASU:129563 Ensembl:ENST00000273009
Ensembl:ENST00000325385 Ensembl:ENST00000360410
Ensembl:ENST00000390005 Ensembl:ENST00000409307
Ensembl:ENST00000409401 Ensembl:ENST00000433430
Ensembl:ENST00000445090 GeneID:129563 KEGG:hsa:129563
UCSC:uc010fxz.3 CTD:129563 GeneCards:GC02P232825 H-InvDB:HIX0002923
HGNC:HGNC:28648 HPA:HPA035797 MIM:267000 MIM:614184
neXtProt:NX_Q8IYB7 Orphanet:2849 PharmGKB:PA162383714
HOVERGEN:HBG107810 InParanoid:Q8IYB7 OMA:HIYEYRE ChiTaRS:DIS3L2
GenomeRNAi:129563 NextBio:82609 ArrayExpress:Q8IYB7 Bgee:Q8IYB7
CleanEx:HS_DIS3L2 Genevestigator:Q8IYB7 Uniprot:Q8IYB7
Length = 885
Score = 202 (76.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 67/214 (31%), Positives = 102/214 (47%)
Query: 47 AVYFSSGMLQQ-SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK 105
A+YF SG+LQ + F HY L P+YTHFTSPIRR+AD++VHRLLAA +G Y LD
Sbjct: 672 ALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG----YRERLDM 727
Query: 106 KASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDE-----DGYVLYVRKNALQIL 160
T L ++ N + + R L T LFF V++ + V+ + K A +L
Sbjct: 728 APDT-LQKQADHCNDRRMASKRVQ-ELSTSLFFAVLVKESGPLESEAMVMGILKQAFDVL 785
Query: 161 IPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTYNEKEQSQSCGSVV 220
+ + VQ +Y NAL + + G P ++ + ++ Q V
Sbjct: 786 VLRYGVQKR----IYC--NALALRSHHFQKVGK------KPELTLVWEPEDMEQEPAQQV 833
Query: 221 FHSFDPVTVQLSLDRSNVQHEKLVLRLVRPVIEG 254
F V V L + + +++ + L RP +G
Sbjct: 834 ITIFSLVEVVLQAESTALKYSAI---LKRPGTQG 864
Score = 50 (22.7 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
+ A+LRRHP P L+ + G + + L SL
Sbjct: 603 EQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSL 644
>UNIPROTKB|E1C372 [details] [associations]
symbol:DIS3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0051306 "mitotic sister chromatid
separation" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0005737 GO:GO:0008285 GO:GO:0003723
GO:GO:0004540 GO:GO:0051306 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 OMA:VQKRVYC EMBL:AADN02020657
EMBL:AADN02020658 EMBL:AADN02020659 EMBL:AADN02020660
EMBL:AADN02020661 EMBL:AADN02020662 EMBL:AADN02020663
IPI:IPI00578279 Ensembl:ENSGALT00000012599 Uniprot:E1C372
Length = 875
Score = 194 (73.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 63/202 (31%), Positives = 93/202 (46%)
Query: 47 AVYFSSGMLQQSD-FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK 105
A+YF +G+L+ F HY L P YTHFTSPIRRYAD++VHRLL+A +G + P ++K
Sbjct: 675 ALYFCTGVLKDETLFRHYALNVPFYTHFTSPIRRYADVVVHRLLSASLGISS--PIKMEK 732
Query: 106 KASTALCYNLNYRNRQAQYAGRASVALHTHLFFRS-RVQDEDGYVLYVRKNALQILIPKS 164
+A + N R ++ S L +F R + + V+ V A +L+ K
Sbjct: 733 EAIQRQAEHCNDRKMASKRVQELSTDLFFAVFVRECGPLESEAMVMGVLNEAFDVLVLKF 792
Query: 165 RVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTYNEKEQSQSCGSVVFHSF 224
VQ +Y NAL +L G R ++ W EQ + F
Sbjct: 793 GVQKR----IYC--NALPLL----GFHFQKVGRKPELTLMWEPERPEQESVSQEITI--F 840
Query: 225 DPVTVQLSLDRSNVQHEKLVLR 246
V V L D +++ L+ R
Sbjct: 841 TLVEVVLRSDGVPLKYSALLKR 862
Score = 59 (25.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLD 44
+ A+LRRHP P L+ + G E+ + L SL+
Sbjct: 606 EQALLRRHPPPQSKLLNDLMEFCHQVGLEIDFSSAGSLHKSLN 648
>UNIPROTKB|I3LLL5 [details] [associations]
symbol:I3LLL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 GO:GO:0003723 GO:GO:0004540 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 EMBL:CU861482
Ensembl:ENSSSCT00000031517 Uniprot:I3LLL5
Length = 385
Score = 181 (68.8 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 49/130 (37%), Positives = 71/130 (54%)
Query: 47 AVYFSSGMLQQ-SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG---ADATYPSL 102
A+YF +G L+ + F HY L P+YTHFTSPIRR+AD++VHRLLAA +G P++
Sbjct: 174 ALYFCAGTLRDPAQFRHYALNVPLYTHFTSPIRRFADVMVHRLLAAALGYREPPDMEPNV 233
Query: 103 LDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDE-----DGYVLYVRKNAL 157
L K+A C + +++ Q L T LFF V++ + VL V A
Sbjct: 234 LQKRADH--CNDRRMASKRVQ-------ELSTGLFFAILVKESGPLESEAMVLGVLNQAF 284
Query: 158 QILIPKSRVQ 167
+L+ + VQ
Sbjct: 285 DVLVLRYGVQ 294
Score = 52 (23.4 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
+ A+LRRHP P L+ + G + + L SL
Sbjct: 105 ERALLRRHPPPQTKMLNDLMEFCEQLGLPMDFSSAGALNKSL 146
>UNIPROTKB|H7C440 [details] [associations]
symbol:DIS3L2 "DIS3-like exonuclease 2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 EMBL:AC013435
GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175 EMBL:AC019130
EMBL:AC068134 EMBL:AC093374 EMBL:AC138658 HGNC:HGNC:28648
ChiTaRS:DIS3L2 EMBL:AC105461 ProteinModelPortal:H7C440
Ensembl:ENST00000424049 Bgee:H7C440 Uniprot:H7C440
Length = 383
Score = 177 (67.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 47 AVYFSSGMLQQ-SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 94
A+YF SG+LQ + F HY L P+YTHFTSPIRR+AD++VHRLLAA +G
Sbjct: 307 ALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG 355
Score = 50 (22.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
+ A+LRRHP P L+ + G + + L SL
Sbjct: 238 EQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSL 279
>UNIPROTKB|E1B7R0 [details] [associations]
symbol:DIS3L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051306 "mitotic sister chromatid separation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0005737 GO:GO:0008285 GO:GO:0003723
GO:GO:0004540 GO:GO:0051306 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 CTD:129563 OMA:VQKRVYC
EMBL:DAAA02006206 EMBL:DAAA02006207 EMBL:DAAA02006208
IPI:IPI00693579 RefSeq:NP_001179435.1 UniGene:Bt.54653
ProteinModelPortal:E1B7R0 Ensembl:ENSBTAT00000038112 GeneID:519222
KEGG:bta:519222 NextBio:20872834 Uniprot:E1B7R0
Length = 882
Score = 182 (69.1 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 49/127 (38%), Positives = 70/127 (55%)
Query: 47 AVYFSSGMLQQ-SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK 105
AVYF SG L+ + F HY L P+YTHFTSPIRR+AD++VHRLLA+ +G Y L D
Sbjct: 672 AVYFCSGALRDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLASALG----YRELPDV 727
Query: 106 KASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDE-----DGYVLYVRKNALQIL 160
+ + L ++ N + + R L T LFF V++ + V+ V A +L
Sbjct: 728 EPDS-LQKQADHCNDRRMASKRVQ-ELSTGLFFAILVRESGPLESEAMVMGVLNQAFDVL 785
Query: 161 IPKSRVQ 167
+ + VQ
Sbjct: 786 VLRYGVQ 792
Score = 51 (23.0 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
+ A+LRRHP P L+ + G + + L SL
Sbjct: 603 EQALLRRHPPPQTKMLNDLVEFCDQMGLPMDFSSAGALNKSL 644
>GENEDB_PFALCIPARUM|MAL13P1.289 [details] [associations]
symbol:MAL13P1.289 "mitotic control protein
dis3 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0004527 "exonuclease activity" evidence=ISS] [GO:0000178
"exosome (RNase complex)" evidence=ISS] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004527
GO:GO:0000178 GO:GO:0004540 EMBL:AL844509 InterPro:IPR022966
PROSITE:PS01175 KO:K12585 RefSeq:XP_001350300.2
EnsemblProtists:MAL13P1.289:mRNA GeneID:813851 KEGG:pfa:MAL13P1.289
EuPathDB:PlasmoDB:PF3D7_1359300 HOGENOM:HOG000281701
ProtClustDB:CLSZ2515355 Uniprot:Q8IDB6
Length = 1073
Score = 180 (68.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 57/163 (34%), Positives = 82/163 (50%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDF-HHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGA 95
K + T AV+ S + +D HYGLA IYT FTSPIRRYADI+VHR+L
Sbjct: 879 KVMVTKCMNEAVFISGYNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHRILNHIYQI 938
Query: 96 ---DATYPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRS-RVQDEDGYVLY 151
D Y ++ AL N YRN A++A RASV ++L+ + Q + +
Sbjct: 939 EELDKKYLDIIYLNKQVALL-NDKYRN--ARFASRASVDFFSYLYIKKIGNQITNAVITN 995
Query: 152 VRKNALQILIPK------SRVQDEDGYVLYVRKNALQILIPKY 188
++KN +QI + ++ +DG+ L+ K I I KY
Sbjct: 996 LKKNGIQIFLIDYFTEGICYLKRKDGF-LFDEKKKRFIKIDKY 1037
Score = 50 (22.7 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 4 AMLRRHPVPPPANFEPLLHAARR-QGFELSVGTGKELATSLD 44
++LRRHP P + L + Q F+ T K+L+ S++
Sbjct: 823 SVLRRHPPPKHEYLKELNDYLKTIQVFDFKYNTSKDLSHSIN 864
>UNIPROTKB|Q8IDB6 [details] [associations]
symbol:MAL13P1.289 "Mitotic control protein dis3 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000178
"exosome (RNase complex)" evidence=ISS] [GO:0004527 "exonuclease
activity" evidence=ISS] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0003723 GO:GO:0004527 GO:GO:0000178
GO:GO:0004540 EMBL:AL844509 InterPro:IPR022966 PROSITE:PS01175
KO:K12585 RefSeq:XP_001350300.2 EnsemblProtists:MAL13P1.289:mRNA
GeneID:813851 KEGG:pfa:MAL13P1.289 EuPathDB:PlasmoDB:PF3D7_1359300
HOGENOM:HOG000281701 ProtClustDB:CLSZ2515355 Uniprot:Q8IDB6
Length = 1073
Score = 180 (68.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 57/163 (34%), Positives = 82/163 (50%)
Query: 37 KELATSLDAAAVYFSSGMLQQSDF-HHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGA 95
K + T AV+ S + +D HYGLA IYT FTSPIRRYADI+VHR+L
Sbjct: 879 KVMVTKCMNEAVFISGYNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHRILNHIYQI 938
Query: 96 ---DATYPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRS-RVQDEDGYVLY 151
D Y ++ AL N YRN A++A RASV ++L+ + Q + +
Sbjct: 939 EELDKKYLDIIYLNKQVALL-NDKYRN--ARFASRASVDFFSYLYIKKIGNQITNAVITN 995
Query: 152 VRKNALQILIPK------SRVQDEDGYVLYVRKNALQILIPKY 188
++KN +QI + ++ +DG+ L+ K I I KY
Sbjct: 996 LKKNGIQIFLIDYFTEGICYLKRKDGF-LFDEKKKRFIKIDKY 1037
Score = 50 (22.7 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 4 AMLRRHPVPPPANFEPLLHAARR-QGFELSVGTGKELATSLD 44
++LRRHP P + L + Q F+ T K+L+ S++
Sbjct: 823 SVLRRHPPPKHEYLKELNDYLKTIQVFDFKYNTSKDLSHSIN 864
>DICTYBASE|DDB_G0278757 [details] [associations]
symbol:DDB_G0278757 "DIS3-like exonuclease 2"
species:44689 "Dictyostelium discoideum" [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
dictyBase:DDB_G0278757 GO:GO:0003723 EMBL:AAFI02000024
GO:GO:0004540 eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
RefSeq:XP_641919.1 ProteinModelPortal:Q54XT5
EnsemblProtists:DDB0206173 GeneID:8621677 KEGG:ddi:DDB_G0278757
InParanoid:Q54XT5 OMA:EICTIDP ProtClustDB:CLSZ2447996
Uniprot:Q54XT5
Length = 1343
Score = 171 (65.3 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 39/87 (44%), Positives = 49/87 (56%)
Query: 47 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPS----L 102
A YF S ++ D+ HY L P YTHFTSPIRRYADIIVHRLL I + + L
Sbjct: 1137 AEYFCSNNEEEEDWRHYALNAPFYTHFTSPIRRYADIIVHRLLDLSIQVEKNNRNHTEQL 1196
Query: 103 LDKKASTALCYNLNYRNRQAQYAGRAS 129
++ TA+C N N + A+ A S
Sbjct: 1197 PSSESITAICKNCNEKKLNARKAQERS 1223
Score = 62 (26.9 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 3 NAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
N++LRRHP P E + + GFE+ + S+
Sbjct: 1070 NSLLRRHPSPNENKLESFISFCSKHGFEIDSSSSLTFGESI 1110
>ZFIN|ZDB-GENE-070705-171 [details] [associations]
symbol:si:ch211-273k1.4 "si:ch211-273k1.4"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
ZFIN:ZDB-GENE-070705-171 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
EMBL:BX001029 IPI:IPI00499069 Ensembl:ENSDART00000083272
Uniprot:E7F350
Length = 995
Score = 170 (64.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 61/212 (28%), Positives = 98/212 (46%)
Query: 47 AVYFSSGMLQQSD-FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK 105
AVYF +G L+ F HY L P+YTHFTSPIRRYAD+IVHRLL A + P L
Sbjct: 802 AVYFCAGALKDEKLFRHYALNVPLYTHFTSPIRRYADVIVHRLLGASLNCG---PRL--S 856
Query: 106 KASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQ-----DEDGYVLYVRKNALQIL 160
+ + ++ N + + R L + LFF V+ D + V+ V + +L
Sbjct: 857 VSGEEVHQQASHCNDRKTASKRVQ-ELSSELFFAVFVKECGPLDSEAMVMGVLDQSFDVL 915
Query: 161 IPKSRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDS-PSVSWTYNEKEQSQSCGSV 219
+ + VQ +Y N+L+ GL+ F + P ++ + + S+
Sbjct: 916 VLRYGVQKR----IYC--NSLE------GLKEVEFRKVGKKPEMTLVWETDDPSKDSIKQ 963
Query: 220 VFHSFDPVTVQLSLDRSNVQHEKLVLRLVRPV 251
F + VQL D + +++ + R + P+
Sbjct: 964 EISIFTLLNVQLKADGAPMKYSATLKRPLAPM 995
Score = 47 (21.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 4 AMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLD 44
A+LRRHP P + + + G ++ + L SL+
Sbjct: 735 ALLRRHPPPQTKMVDDMQEFFDQMGLDIDFSSSGALHRSLN 775
>TAIR|locus:2203231 [details] [associations]
symbol:AT1G77680 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0004540
"ribonuclease activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003723 GO:GO:0004540
eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175 OMA:HIYEYRE
EMBL:AK229034 IPI:IPI00531584 RefSeq:NP_177891.1 UniGene:At.22476
ProteinModelPortal:Q0WPN0 STRING:Q0WPN0 PaxDb:Q0WPN0 PRIDE:Q0WPN0
EnsemblPlants:AT1G77680.1 GeneID:844104 KEGG:ath:AT1G77680
TAIR:At1g77680 HOGENOM:HOG000030596 InParanoid:Q0WPN0
PhylomeDB:Q0WPN0 ProtClustDB:CLSN2682125 Genevestigator:Q0WPN0
Uniprot:Q0WPN0
Length = 1055
Score = 163 (62.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 34/67 (50%), Positives = 45/67 (67%)
Query: 47 AVYFSSGMLQQS--DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLD 104
A YF +G L+ S ++ HY LA P+YTHFTSP+RRY DI+VHR LAA + A+ Y
Sbjct: 775 ASYFCTGNLKDSVAEWGHYALAVPLYTHFTSPLRRYPDIVVHRALAAALEAEELY----S 830
Query: 105 KKASTAL 111
K+ TA+
Sbjct: 831 KQKQTAI 837
Score = 56 (24.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 3 NAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSLD 44
+++LRRHP P + + G +L + + +L SL+
Sbjct: 707 SSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSSGQLQDSLE 748
>CGD|CAL0003016 [details] [associations]
symbol:SSD1 species:5476 "Candida albicans" [GO:0020012
"evasion or tolerance of host immune response" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0010494 "cytoplasmic
stress granule" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005935 "cellular bud neck"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0060237 "regulation of fungal-type cell wall organization"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:2000115 "regulation of maintenance of bipolar
cell polarity regulating cell shape" evidence=IEA] [GO:0000900
"translation repressor activity, nucleic acid binding"
evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 CGD:CAL0003016
GO:GO:0009405 GO:GO:0003723 GO:GO:0004540 EMBL:AACQ01000012
GO:GO:0020012 RefSeq:XP_721868.1 ProteinModelPortal:Q5AK62
STRING:Q5AK62 GeneID:3636520 KEGG:cal:CaO19.3959 Uniprot:Q5AK62
Length = 1274
Score = 140 (54.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 40/126 (31%), Positives = 58/126 (46%)
Query: 49 YFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKAS 108
Y+ +G + HY P+YTHFT+P+RRYAD+IVHR L A + L KA
Sbjct: 956 YYVAGKQDTDSYAHYYFNLPLYTHFTAPLRRYADLIVHRQLKAVLNKQVEDKDLDSLKAI 1015
Query: 109 TALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDED-------GYVLYVRKNALQILI 161
T C N++ A A A+H L E G V+ V +++ + I
Sbjct: 1016 TDYC---NFKKDCA--ANAQEQAIHLLLSQTINEMSETAGQLLCMGTVVQVYESSFDVFI 1070
Query: 162 PKSRVQ 167
P+ V+
Sbjct: 1071 PEFGVE 1076
Score = 73 (30.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
D A+LRRHP+P E + A GF++ T L S+
Sbjct: 890 DQAILRRHPLPTLQKMETFVRKATSLGFKIDTTTSSTLQNSI 931
>UNIPROTKB|Q5AK62 [details] [associations]
symbol:SSD1 "Putative uncharacterized protein SSD1"
species:237561 "Candida albicans SC5314" [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0020012 "evasion or tolerance of host immune
response" evidence=IMP] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 CGD:CAL0003016 GO:GO:0009405 GO:GO:0003723
GO:GO:0004540 EMBL:AACQ01000012 GO:GO:0020012 RefSeq:XP_721868.1
ProteinModelPortal:Q5AK62 STRING:Q5AK62 GeneID:3636520
KEGG:cal:CaO19.3959 Uniprot:Q5AK62
Length = 1274
Score = 140 (54.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 40/126 (31%), Positives = 58/126 (46%)
Query: 49 YFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKAS 108
Y+ +G + HY P+YTHFT+P+RRYAD+IVHR L A + L KA
Sbjct: 956 YYVAGKQDTDSYAHYYFNLPLYTHFTAPLRRYADLIVHRQLKAVLNKQVEDKDLDSLKAI 1015
Query: 109 TALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDED-------GYVLYVRKNALQILI 161
T C N++ A A A+H L E G V+ V +++ + I
Sbjct: 1016 TDYC---NFKKDCA--ANAQEQAIHLLLSQTINEMSETAGQLLCMGTVVQVYESSFDVFI 1070
Query: 162 PKSRVQ 167
P+ V+
Sbjct: 1071 PEFGVE 1076
Score = 73 (30.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
D A+LRRHP+P E + A GF++ T L S+
Sbjct: 890 DQAILRRHPLPTLQKMETFVRKATSLGFKIDTTTSSTLQNSI 931
>ASPGD|ASPL0000054659 [details] [associations]
symbol:AN1158 species:162425 "Emericella nidulans"
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005935
"cellular bud neck" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0000900 "translation repressor activity, nucleic
acid binding" evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IEA] [GO:0060237 "regulation of fungal-type cell wall
organization" evidence=IEA] [GO:0008298 "intracellular mRNA
localization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:2000115 "regulation of maintenance
of bipolar cell polarity regulating cell shape" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 EMBL:AACD01000016
EMBL:BN001308 GO:GO:0003723 GO:GO:0004540 eggNOG:COG0557
OrthoDB:EOG4MGWGN HOGENOM:HOG000207194 OMA:DIFICGS
RefSeq:XP_658762.1 ProteinModelPortal:Q5BE72 STRING:Q5BE72
EnsemblFungi:CADANIAT00001468 GeneID:2876936 KEGG:ani:AN1158.2
Uniprot:Q5BE72
Length = 1374
Score = 159 (61.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 42/122 (34%), Positives = 62/122 (50%)
Query: 47 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT-YPSLLDK 105
A Y+ +G +Q HY L P+YTHFT+P+RRYAD+IVHR L A + A + ++
Sbjct: 1041 AKYYVAGTVQDEMRPHYTLNLPVYTHFTNPLRRYADVIVHRQLEAVLSDGAIEFSDDVES 1100
Query: 106 KASTA-LCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDE---DGYVLYVRKNALQILI 161
+ TA +C N AQ A R + + +G VL V ++A +LI
Sbjct: 1101 LSKTADICNNKKDSAHNAQEQSVHIEACRNMDKLRQEIGGDLISEGIVLCVYESAFDVLI 1160
Query: 162 PK 163
P+
Sbjct: 1161 PE 1162
Score = 51 (23.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
D A LRR P P + R GF + L +SL
Sbjct: 977 DKAFLRRQQSPNPRRLHSFVDRMNRLGFGFDESSSGSLQSSL 1018
>POMBASE|SPAC2C4.07c [details] [associations]
symbol:SPAC2C4.07c "ribonuclease II (RNB) family
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISM] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006401 "RNA catabolic process" evidence=ISM]
[GO:0033554 "cellular response to stress" evidence=IEP]
InterPro:IPR001900 Pfam:PF00773 PROSITE:PS50126 SMART:SM00955
PomBase:SPAC2C4.07c GO:GO:0005829 EMBL:CU329670 GO:GO:0033554
GO:GO:0003723 GO:GO:0006401 GO:GO:0004527 GO:GO:0004540
eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175 EMBL:AB027825
PIR:T38518 RefSeq:NP_594510.1 ProteinModelPortal:O14040
STRING:O14040 EnsemblFungi:SPAC2C4.07c.1 GeneID:2542643
KEGG:spo:SPAC2C4.07c OMA:WIISHEE OrthoDB:EOG4MGWGN NextBio:20803692
Uniprot:O14040
Length = 927
Score = 153 (58.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 40/114 (35%), Positives = 60/114 (52%)
Query: 47 AVYFSSGML-QQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK 105
A YF +G +++D+HHY L+ YTHFTSPIRRY DIIVHRLL + T P + DK
Sbjct: 738 AEYFCTGDFGEKTDWHHYALSFNHYTHFTSPIRRYPDIIVHRLLERSL--KNTSPGI-DK 794
Query: 106 KASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNALQI 159
K + + + N + ++ S L ++ + D + V+ A +I
Sbjct: 795 KNCSLVAAHCNEKKEKSTTVQEDSQQLFLSVYIAEYCKKHDKKSMPVQAFATRI 848
Score = 48 (22.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
+N++LRRH P H + F+ + S+
Sbjct: 671 NNSLLRRHASPKEKQINEFCHFLKSMNFDFDASSSAAFNASM 712
>WB|WBGene00018612 [details] [associations]
symbol:F48E8.6 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 EMBL:FO081421 GO:GO:0003723 GO:GO:0090305
GO:GO:0004540 eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 OMA:HIYEYRE HOGENOM:HOG000017705
PIR:T16409 RefSeq:NP_498160.2 ProteinModelPortal:Q09568 SMR:Q09568
STRING:Q09568 PaxDb:Q09568 EnsemblMetazoa:F48E8.6 GeneID:175748
KEGG:cel:CELE_F48E8.6 UCSC:F48E8.6 CTD:175748 WormBase:F48E8.6
InParanoid:Q09568 NextBio:889474 Uniprot:Q09568
Length = 848
Score = 140 (54.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/48 (56%), Positives = 33/48 (68%)
Query: 47 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 94
A YF + + S +HH+ L YTHFTSPIRRY D+IVHR LAA +G
Sbjct: 639 AKYFCTFEMPLSFYHHFALNVDHYTHFTSPIRRYPDVIVHRQLAAALG 686
Score = 61 (26.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 2 DNAMLRRHPVPPPANFEPLLHAARRQGFELSVGTGKELATSL 43
++A+LR HP P + + R GF L T L+TSL
Sbjct: 570 EHALLRNHPPPKEKMIKDVAEQCARIGFPLDGRTSGLLSTSL 611
>TIGR_CMR|GSU_1485 [details] [associations]
symbol:GSU_1485 "ribonuclease R, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008997 "ribonuclease R
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] HAMAP:MF_01895 InterPro:IPR001900 InterPro:IPR003029
InterPro:IPR004476 InterPro:IPR011129 InterPro:IPR011805
Pfam:PF00575 Pfam:PF00773 PROSITE:PS50126 SMART:SM00357
SMART:SM00955 GO:GO:0005737 GO:GO:0003723 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0090305 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016070 InterPro:IPR022967
SMART:SM00316 InterPro:IPR022966 PROSITE:PS01175 GO:GO:0008859
InterPro:IPR013223 Pfam:PF08206 TIGRFAMs:TIGR00358 KO:K12573
OMA:FGFLIPD TIGRFAMs:TIGR02063 HOGENOM:HOG000071119
RefSeq:NP_952536.1 ProteinModelPortal:Q74D34 GeneID:2686169
KEGG:gsu:GSU1485 PATRIC:22025817 ProtClustDB:CLSK828384
BioCyc:GSUL243231:GH27-1468-MONOMER Uniprot:Q74D34
Length = 763
Score = 143 (55.4 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 36/92 (39%), Positives = 49/92 (53%)
Query: 62 HYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTAL---CYNLNYR 118
H+GLA YTHFTSPIRRY D++VHR+L + T ++ + AL + R
Sbjct: 540 HFGLAARCYTHFTSPIRRYPDLVVHRILKDILAGAMTEKE--QERLAAALPETAEQTSRR 597
Query: 119 NRQAQYAGRASVALHTHLFFRSRVQDE-DGYV 149
R A A R VAL F + RV + +GY+
Sbjct: 598 ERLAMEAEREIVALKKAQFMKERVGETFEGYI 629
>SGD|S000002701 [details] [associations]
symbol:SSD1 "Translational repressor with a role in polar
growth and wall integrity" species:4932 "Saccharomyces cerevisiae"
[GO:0005933 "cellular bud" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0000900 "translation
repressor activity, nucleic acid binding" evidence=IGI] [GO:0060237
"regulation of fungal-type cell wall organization" evidence=IGI]
[GO:0017148 "negative regulation of translation" evidence=IGI]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005935
"cellular bud neck" evidence=IDA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 SGD:S000002701 GO:GO:0005634 GO:GO:0005935
GO:GO:0051301 GO:GO:0007067 EMBL:BK006938 GO:GO:0048027
GO:GO:0000932 GO:GO:0004540 GO:GO:0008298 GO:GO:0060237
GO:GO:0010494 GO:GO:0000900 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 OrthoDB:EOG4MGWGN EMBL:U51031 EMBL:M60318
EMBL:M63004 PIR:A39578 RefSeq:NP_010579.1 ProteinModelPortal:P24276
DIP:DIP-6449N IntAct:P24276 MINT:MINT-605909 STRING:P24276
PaxDb:P24276 PeptideAtlas:P24276 PRIDE:P24276 EnsemblFungi:YDR293C
GeneID:851887 KEGG:sce:YDR293C CYGD:YDR293c
GeneTree:ENSGT00530000069300 HOGENOM:HOG000207194 OMA:DIFICGS
NextBio:969865 Genevestigator:P24276 GermOnline:YDR293C
Uniprot:P24276
Length = 1250
Score = 143 (55.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 34/87 (39%), Positives = 48/87 (55%)
Query: 47 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK- 105
A YF +G + + HY L PIYTHFT+P+RRYAD +VHR L A I D Y ++
Sbjct: 968 ARYFIAGKVDPDQYGHYALNLPIYTHFTAPMRRYADHVVHRQLKAVIH-DTPYTEDMEAL 1026
Query: 106 KASTALCYNLNYRNRQAQYAGRASVAL 132
K ++ C N++ A A ++ L
Sbjct: 1027 KITSEYC---NFKKDCAYQAQEQAIHL 1050
Score = 43 (20.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 173 VLYVRKNALQILIPKYGLE 191
VL V +++ + IP++G+E
Sbjct: 1072 VLQVYESSFDVFIPEFGIE 1090
>TIGR_CMR|CPS_4617 [details] [associations]
symbol:CPS_4617 "ribonuclease R" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008997 "ribonuclease R activity"
evidence=ISS] [GO:0016075 "rRNA catabolic process" evidence=ISS]
HAMAP:MF_01895 InterPro:IPR001900 InterPro:IPR003029
InterPro:IPR004476 InterPro:IPR011129 InterPro:IPR011805
Pfam:PF00575 Pfam:PF00773 PROSITE:PS50126 SMART:SM00357
SMART:SM00955 GO:GO:0005737 GO:GO:0003723 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0090305 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016070 InterPro:IPR022967
SMART:SM00316 eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
GO:GO:0008859 InterPro:IPR013223 Pfam:PF08206 TIGRFAMs:TIGR00358
HOGENOM:HOG000071120 KO:K12573 OMA:FGFLIPD TIGRFAMs:TIGR02063
RefSeq:YP_271264.1 ProteinModelPortal:Q47VA8 STRING:Q47VA8
GeneID:3520956 KEGG:cps:CPS_4617 PATRIC:21472057
BioCyc:CPSY167879:GI48-4626-MONOMER Uniprot:Q47VA8
Length = 826
Score = 128 (50.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 57 QSDFH-HYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADA 97
QSD H+GLA P Y+HFTSPIRRY D++VHR++ A + +A
Sbjct: 557 QSDNEGHFGLALPSYSHFTSPIRRYPDLVVHRVIKAILEKEA 598
>TIGR_CMR|CHY_0289 [details] [associations]
symbol:CHY_0289 "ribonuclease R" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006401 "RNA
catabolic process" evidence=ISS] [GO:0008997 "ribonuclease R
activity" evidence=ISS] HAMAP:MF_01895 InterPro:IPR001900
InterPro:IPR003029 InterPro:IPR004476 InterPro:IPR011129
InterPro:IPR011805 Pfam:PF00575 Pfam:PF00773 PROSITE:PS50126
SMART:SM00357 SMART:SM00955 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0090305
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016070
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 GO:GO:0008859 InterPro:IPR013223 Pfam:PF08206
TIGRFAMs:TIGR00358 KO:K12573 OMA:FGFLIPD TIGRFAMs:TIGR02063
RefSeq:YP_359161.1 ProteinModelPortal:Q3AFC3 STRING:Q3AFC3
GeneID:3727430 KEGG:chy:CHY_0289 PATRIC:21273751
HOGENOM:HOG000071119 BioCyc:CHYD246194:GJCN-290-MONOMER
Uniprot:Q3AFC3
Length = 724
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 41/127 (32%), Positives = 58/127 (45%)
Query: 62 HYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTA--LCYNLNYRN 119
H+GLA YTHFTSPIRRY D+++HR++ + T P K A + + +
Sbjct: 541 HFGLAAEYYTHFTSPIRRYPDLMIHRIIREVLEGKLT-PRREAKLAKILPKVAKHSSEME 599
Query: 120 RQAQYAGRASVALHTHLFFRSRVQDE-DGYVLYVRKNALQILIPKS-----RVQD-EDGY 172
R+A A R SV + F + E D + V + +P RV ED Y
Sbjct: 600 RRAMEAERESVEMRMVEFMVGKEGTEYDAIISGVTSFGFFVQLPNLIEGLVRVSTLEDDY 659
Query: 173 VLYVRKN 179
LY K+
Sbjct: 660 YLYDEKS 666
>TIGR_CMR|BA_5334 [details] [associations]
symbol:BA_5334 "ribonuclease R" species:198094 "Bacillus
anthracis str. Ames" [GO:0006396 "RNA processing" evidence=ISS]
[GO:0008997 "ribonuclease R activity" evidence=ISS] HAMAP:MF_01895
InterPro:IPR001900 InterPro:IPR003029 InterPro:IPR004476
InterPro:IPR011129 InterPro:IPR011805 Pfam:PF00575 Pfam:PF00773
PROSITE:PS50126 SMART:SM00357 SMART:SM00955 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
GO:GO:0090305 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0016070 InterPro:IPR022967 SMART:SM00316 InterPro:IPR022966
PROSITE:PS01175 GO:GO:0008859 InterPro:IPR013223 Pfam:PF08206
TIGRFAMs:TIGR00358 KO:K12573 OMA:FGFLIPD TIGRFAMs:TIGR02063
HOGENOM:HOG000071119 RefSeq:NP_847510.1 RefSeq:YP_021992.2
RefSeq:YP_031196.1 ProteinModelPortal:Q81XA6 IntAct:Q81XA6
DNASU:1084838 EnsemblBacteria:EBBACT00000009754
EnsemblBacteria:EBBACT00000016672 EnsemblBacteria:EBBACT00000021451
GeneID:1084838 GeneID:2818515 GeneID:2848989 KEGG:ban:BA_5334
KEGG:bar:GBAA_5334 KEGG:bat:BAS4956 ProtClustDB:CLSK873641
BioCyc:BANT260799:GJAJ-5031-MONOMER
BioCyc:BANT261594:GJ7F-5204-MONOMER Uniprot:Q81XA6
Length = 808
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 62 HYGLATPIYTHFTSPIRRYADIIVHRLLAACI--G-ADATYPSLLDKKASTALCYNLNYR 118
H+GL+T YTHFTSPIRRY D IVHRL+ I G D + +K ++ N
Sbjct: 549 HFGLSTEFYTHFTSPIRRYPDTIVHRLIREYIINGKVDNETQAKWREKLPEIAEHSSNME 608
Query: 119 NRQAQYAGRASVALHTHLFFRSRVQDE-DGYVLYVRKNALQILIPKS 164
R + A R + L + ++ +E DG + V L + +P +
Sbjct: 609 RRAVE-AERETDELKKAEYMLDKIGEEYDGMISSVTNFGLFVELPNT 654
>TIGR_CMR|SPO_3330 [details] [associations]
symbol:SPO_3330 "ribonuclease R" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0006401 "RNA catabolic process" evidence=ISS]
[GO:0008997 "ribonuclease R activity" evidence=ISS] HAMAP:MF_01895
InterPro:IPR001900 InterPro:IPR003029 InterPro:IPR004476
InterPro:IPR011805 Pfam:PF00575 Pfam:PF00773 PROSITE:PS50126
SMART:SM00955 GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003723 GO:GO:0090305 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0016070 InterPro:IPR022967 SMART:SM00316
InterPro:IPR022966 PROSITE:PS01175 GO:GO:0008859 TIGRFAMs:TIGR00358
KO:K12573 TIGRFAMs:TIGR02063 RefSeq:YP_168526.1
ProteinModelPortal:Q5LN82 GeneID:3193934 KEGG:sil:SPO3330
PATRIC:23380111 HOGENOM:HOG000071121 OMA:NLRRYAH
ProtClustDB:CLSK934129 Uniprot:Q5LN82
Length = 752
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 39/106 (36%), Positives = 49/106 (46%)
Query: 5 MLRRHPVPPPANFEPLLHAARRQGFELSVGT---GKELATSLDAAA-------VYFSS-- 52
+ R H P P E L A+ G L+ G + L L AA + S+
Sbjct: 474 LFRVHEEPAPEKLEALRETAQASGLTLAKGQVLQTRHLNALLHQAAGTDEAELINISTLR 533
Query: 53 GMLQQ----SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 94
M Q +F H+GLA Y HFTSPIRRY+D+IVHR L G
Sbjct: 534 SMAQAYYNPENFGHFGLALKNYAHFTSPIRRYSDLIVHRGLIKAHG 579
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 35/122 (28%), Positives = 63/122 (51%)
Query: 47 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG-ADATYPSLLDK 105
+V+ S +Q HY L YT +SPIRRY D+++ RL+ +G +TY +
Sbjct: 1875 SVFGRSSQGRQRPAGHYSLQVDWYTWASSPIRRYLDVVLQRLILLALGHKSSTYSN---- 1930
Query: 106 KASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRKNA--LQILIPK 163
+ LC + + + AQ R + +LH + +++ Q++ G+V+ V A ++L P
Sbjct: 1931 RDIDGLCQDFSRQYACAQSYQRRACSLHLAIQLKTQPQNKLGFVVDVETGARCFKVLFPI 1990
Query: 164 SR 165
+R
Sbjct: 1991 NR 1992
>UNIPROTKB|Q5HVE0 [details] [associations]
symbol:CJE0734 "RNB-like protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004540 eggNOG:COG0557
InterPro:IPR022966 PROSITE:PS01175 KO:K12573 RefSeq:YP_178745.1
ProteinModelPortal:Q5HVE0 STRING:Q5HVE0 GeneID:3230687
KEGG:cjr:CJE0734 PATRIC:20043197 HOGENOM:HOG000103239 OMA:DCMLLAN
ProtClustDB:CLSK878874 BioCyc:CJEJ195099:GJC0-751-MONOMER
Uniprot:Q5HVE0
Length = 644
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 30/62 (48%), Positives = 38/62 (61%)
Query: 62 HYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT-YPSLLDKKASTALCYNLNYRNR 120
H+GL Y+HFTSPIRRY+D+I+HRLL A D + LL ST C NL+ R
Sbjct: 496 HFGLGFDKYSHFTSPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIEST--CENLSTLER 553
Query: 121 QA 122
+A
Sbjct: 554 EA 555
>TIGR_CMR|CJE_0734 [details] [associations]
symbol:CJE_0734 "RNB-like protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004540 eggNOG:COG0557
InterPro:IPR022966 PROSITE:PS01175 KO:K12573 RefSeq:YP_178745.1
ProteinModelPortal:Q5HVE0 STRING:Q5HVE0 GeneID:3230687
KEGG:cjr:CJE0734 PATRIC:20043197 HOGENOM:HOG000103239 OMA:DCMLLAN
ProtClustDB:CLSK878874 BioCyc:CJEJ195099:GJC0-751-MONOMER
Uniprot:Q5HVE0
Length = 644
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 30/62 (48%), Positives = 38/62 (61%)
Query: 62 HYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT-YPSLLDKKASTALCYNLNYRNR 120
H+GL Y+HFTSPIRRY+D+I+HRLL A D + LL ST C NL+ R
Sbjct: 496 HFGLGFDKYSHFTSPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIEST--CENLSTLER 553
Query: 121 QA 122
+A
Sbjct: 554 EA 555
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 124 (48.7 bits), Expect = 0.00039, P = 0.00039
Identities = 38/133 (28%), Positives = 66/133 (49%)
Query: 36 GKELATSLDAAAV-YFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 94
G++L +L+ +A + G QQ HY L YT TSPIRRY D+++ R + +G
Sbjct: 1635 GRDLRKALERSAFGRCARGHQQQGG--HYSLQVDWYTWATSPIRRYLDVVLQRQILLALG 1692
Query: 95 ADATYPSLLDKKASTALCYNLNYRNRQAQYAGRASVALHTHLFFRSRVQDEDGYVLYVRK 154
+ S D LC + ++ AQ R + +LH + +++ D+ G+V+ V
Sbjct: 1693 HGGSAYSARD---IDGLCQAFSLQHALAQSYQRRARSLHLAVQLKAQPLDKLGFVVDVEA 1749
Query: 155 NA--LQILIPKSR 165
+ ++L P +R
Sbjct: 1750 GSRCFRLLFPSNR 1762
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 122 (48.0 bits), Expect = 0.00063, P = 0.00063
Identities = 55/183 (30%), Positives = 82/183 (44%)
Query: 49 YFS-SGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKA 107
YF S QS HY L YT +SPIRRY DI+V R L + + P
Sbjct: 1566 YFCRSNSTAQSKVGHYSLKVDSYTWASSPIRRYMDIVVQRHLHSVLRKK---PITCSSDD 1622
Query: 108 STALCYNLNYRNRQA-QYAGRAS-VALHTHLFFRSRVQDEDGYVLYVR--KNALQILIPK 163
LC++ N +N +A Y RA + + T L + +V + +V+ + + L P
Sbjct: 1623 IDFLCHDFNKKNSKATMYEKRARCMQMATQL--KGQVMQKIAFVVDIEGTDRYFKALFPL 1680
Query: 164 SRVQDEDGYVLYVRKNALQILIPKYGLEGTLFLRCDSPSVSWTYNEKEQSQSCGSVVFHS 223
+R D +V+ R ALQ++ E FL+ S SV T+ K + S ++ HS
Sbjct: 1681 NRESLPDPHVINYR--ALQLI------EQPTFLQNQS-SVRLTW--KRRMYSVKTMKEHS 1729
Query: 224 FDP 226
P
Sbjct: 1730 LTP 1732
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 279 267 0.00095 114 3 11 22 0.43 33
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 597 (63 KB)
Total size of DFA: 189 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 21.60u 0.08s 21.68t Elapsed: 00:00:14
Total cpu time: 21.62u 0.08s 21.70t Elapsed: 00:00:18
Start: Thu Aug 15 13:48:02 2013 End: Thu Aug 15 13:48:20 2013