BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4850
(64 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P4Q7|CNNM4_HUMAN Metal transporter CNNM4 OS=Homo sapiens GN=CNNM4 PE=1 SV=3
Length = 775
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 5 VTTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
VT +NDL K+E+N+I GALELR K V D+MT+L+D +M+ DAILDF T+SEIM+S
Sbjct: 347 VTEPYNDLVKEELNMIQGALELRTKTVEDIMTQLQDCFMIRSDAILDFNTMSEIMES 403
>sp|P0C588|CNNM4_RAT Metal transporter CNNM4 OS=Rattus norvegicus GN=Cnnm4 PE=1 SV=1
Length = 772
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 5 VTTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
VT +NDL K+E+N+I GALELR K V D+MT+L D +M+ DAILDF T+SEIM+S
Sbjct: 345 VTEPYNDLVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIMES 401
>sp|Q3TWN3|CNNM2_MOUSE Metal transporter CNNM2 OS=Mus musculus GN=Cnnm2 PE=1 SV=3
Length = 875
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 5 VTTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
VT +NDL K+E+NII GALELR K V DVMT L D +M++ +AILDF T+SEIM+S
Sbjct: 420 VTDPYNDLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMES 476
>sp|Q69ZF7|CNNM4_MOUSE Metal transporter CNNM4 OS=Mus musculus GN=Cnnm4 PE=1 SV=2
Length = 771
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 5 VTTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
VT +NDL K+E+N+I GALELR K V D+MT+L D +M+ DAILDF T+SEIM+S
Sbjct: 344 VTEPYNDLVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIMES 400
>sp|Q5U2P1|CNNM2_RAT Metal transporter CNNM2 OS=Rattus norvegicus GN=Cnnm2 PE=2 SV=1
Length = 875
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 5 VTTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
VT +NDL K+E+NII GALELR K V DVMT L D +M++ +AILDF T+SEIM+S
Sbjct: 420 VTDPYNDLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMES 476
>sp|Q9H8M5|CNNM2_HUMAN Metal transporter CNNM2 OS=Homo sapiens GN=CNNM2 PE=1 SV=2
Length = 875
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 5 VTTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
VT +NDL K+E+NII GALELR K V DVMT L D +M++ +AILDF T+SEIM+S
Sbjct: 420 VTDPYNDLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMES 476
>sp|Q0GA42|CNNM1_MOUSE Metal transporter CNNM1 OS=Mus musculus GN=Cnnm1 PE=1 SV=5
Length = 951
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 9 FNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
++DL K+E+NII GALELR K+V +V+T L D +ML DA+LDF TVSEI++S
Sbjct: 407 YSDLVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRS 459
>sp|Q9NRU3|CNNM1_HUMAN Metal transporter CNNM1 OS=Homo sapiens GN=CNNM1 PE=2 SV=3
Length = 951
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 9 FNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
++DL K+E+NII GALELR K+V +V+T L D +ML DA+LDF TVSEI++S
Sbjct: 407 YSDLVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRS 459
>sp|A0JPA0|CNNM4_XENTR Metal transporter CNNM4 OS=Xenopus tropicalis GN=cnnm4 PE=2 SV=1
Length = 769
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 44/57 (77%)
Query: 5 VTTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
VT ++ + ++E+NII GALELR K V DVMTK+ED +ML DA+LDF T+S IM+S
Sbjct: 344 VTEPYSGIVREEMNIIQGALELRTKTVEDVMTKVEDCFMLPSDAVLDFNTMSSIMES 400
>sp|Q12296|MAM3_YEAST Protein MAM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=MAM3 PE=1 SV=1
Length = 706
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 12 LEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
L KDEV IIS L+L+ K V ++MT +E+V+ +S D ILD +TV +I S
Sbjct: 236 LTKDEVTIISAVLDLKAKRVEEIMTPIENVFTMSADTILDDKTVEKIFNS 285
>sp|Q9USJ3|YJ23_SCHPO Uncharacterized protein C4B3.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC4B3.03c PE=1 SV=1
Length = 679
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 10 NDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIM 59
+ L +DEV II+ L+LR K +MT +EDV+ L D ILD + + EI+
Sbjct: 235 DKLNQDEVTIITAVLDLREKHAESIMTPIEDVFTLPMDRILDEDLIGEII 284
>sp|Q8RY60|Y1733_ARATH DUF21 domain-containing protein At1g47330 OS=Arabidopsis thaliana
GN=CBSDUF7 PE=1 SV=1
Length = 527
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 10 NDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIM 59
DL DE +II+GALEL K D MT + + + L D L+ ET++ IM
Sbjct: 185 GDLTTDETSIITGALELTEKTAKDAMTPISNAFSLELDTPLNLETLNTIM 234
>sp|Q8VZI2|Y4370_ARATH DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana
GN=CBSDUF6 PE=1 SV=1
Length = 424
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 10 NDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIM-KSESK 64
+L DE II+GALEL K+V D MT + D++++ +A LD + ++ I+ K S+
Sbjct: 185 GELTHDETTIIAGALELSEKMVKDAMTPISDIFVIDINAKLDRDLMNLILEKGHSR 240
>sp|Q67XQ0|Y4424_ARATH DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana
GN=CBSDUF1 PE=2 SV=1
Length = 494
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 11 DLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIM 59
+L DE IISGAL+L K + MT +E + L ++ LD+E + +I+
Sbjct: 208 ELTHDETTIISGALDLTEKTAQEAMTPIESTFSLDVNSKLDWEAMGKIL 256
>sp|Q9ZVS8|Y1327_ARATH Putative DUF21 domain-containing protein At1g03270 OS=Arabidopsis
thaliana GN=CBSDUF4 PE=4 SV=2
Length = 499
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 10 NDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIM 59
+L +E IISGAL+L +K + MT +E + L + LD+ET+ +I+
Sbjct: 205 GELTHEETMIISGALDLSQKTAEEAMTPIESTFSLDVNTKLDWETIGKIL 254
>sp|Q32NY4|CNNM3_MOUSE Metal transporter CNNM3 OS=Mus musculus GN=Cnnm3 PE=1 SV=2
Length = 713
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
LR + V DV+T LED +ML +LDF ++ IM+S
Sbjct: 315 LRSRTVEDVLTPLEDCFMLDSGTVLDFSVLASIMQS 350
>sp|Q9ZQR4|Y2452_ARATH DUF21 domain-containing protein At2g14520 OS=Arabidopsis thaliana
GN=CBSDUF3 PE=2 SV=2
Length = 423
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 11 DLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIM 59
+L DE II+GALEL K+ D MT + D +++ +A LD + ++ I+
Sbjct: 186 ELTHDETTIIAGALELSEKMAKDAMTPISDTFVIDINAKLDRDLMNLIL 234
>sp|Q8NE01|CNNM3_HUMAN Metal transporter CNNM3 OS=Homo sapiens GN=CNNM3 PE=1 SV=1
Length = 707
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61
LR + V DV+T LED +ML +LDF ++ IM+S
Sbjct: 309 LRCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQS 344
>sp|Q4V3C7|Y4423_ARATH DUF21 domain-containing protein At4g14230 OS=Arabidopsis thaliana
GN=CBSDUF2 PE=2 SV=1
Length = 495
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 11 DLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEI 58
+L DE IISGAL+L K + MT +E + L ++ LD E + +I
Sbjct: 207 ELTHDETTIISGALDLTEKTAQEAMTPIESTFSLDVNSKLDREAMDKI 254
>sp|Q9LTD8|Y5279_ARATH DUF21 domain-containing protein At5g52790 OS=Arabidopsis thaliana
GN=CBSDUF5 PE=2 SV=2
Length = 500
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 11 DLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEI 58
+L DE IISGAL++ +K D MT + ++ L + LD +T+ I
Sbjct: 187 ELTHDETTIISGALDMSQKSAKDAMTPVSQIFSLDINFKLDEKTMGLI 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,332,471
Number of Sequences: 539616
Number of extensions: 612942
Number of successful extensions: 1639
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1618
Number of HSP's gapped (non-prelim): 25
length of query: 64
length of database: 191,569,459
effective HSP length: 36
effective length of query: 28
effective length of database: 172,143,283
effective search space: 4820011924
effective search space used: 4820011924
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)