Query psy4850
Match_columns 64
No_of_seqs 153 out of 1023
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 19:17:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4850.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4850hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ocm_A Putative membrane prote 99.2 1E-11 3.5E-16 75.7 3.1 58 6-64 13-70 (173)
2 3oi8_A Uncharacterized protein 99.2 1E-11 3.6E-16 73.8 2.9 58 6-64 15-72 (156)
3 3lv9_A Putative transporter; C 99.1 3.5E-11 1.2E-15 70.5 1.8 56 8-64 2-57 (148)
4 3lhh_A CBS domain protein; str 99.0 3.9E-11 1.4E-15 72.4 1.1 58 6-64 19-76 (172)
5 3oco_A Hemolysin-like protein 98.7 6.2E-10 2.1E-14 65.6 -1.1 53 11-64 2-54 (153)
6 3t4n_C Nuclear protein SNF4; C 98.7 1.3E-09 4.5E-14 70.3 -0.3 58 6-64 6-64 (323)
7 2qrd_G Protein C1556.08C; AMPK 98.6 1.2E-08 4.1E-13 66.1 1.8 54 10-64 2-56 (334)
8 3k6e_A CBS domain protein; str 98.2 1.5E-07 5.3E-12 56.2 0.2 46 18-64 3-49 (156)
9 2v8q_E 5'-AMP-activated protei 98.1 2.5E-07 8.5E-12 59.8 -0.5 55 7-64 15-69 (330)
10 3kxr_A Magnesium transporter, 98.0 3.3E-06 1.1E-10 52.5 3.3 48 11-61 36-83 (205)
11 3i8n_A Uncharacterized protein 97.9 1.9E-06 6.6E-11 49.1 -0.1 39 25-64 2-40 (130)
12 3jtf_A Magnesium and cobalt ef 97.9 3.7E-06 1.3E-10 47.9 1.1 38 26-64 2-39 (129)
13 3hf7_A Uncharacterized CBS-dom 97.8 5E-06 1.7E-10 47.6 1.3 36 28-64 1-36 (130)
14 3lfr_A Putative metal ION tran 97.8 3.9E-06 1.3E-10 48.3 0.6 37 27-64 1-37 (136)
15 3nqr_A Magnesium and cobalt ef 97.6 1.1E-05 3.8E-10 45.7 0.6 37 27-64 1-37 (127)
16 2zy9_A Mg2+ transporter MGTE; 97.4 0.00011 3.6E-09 50.9 3.3 50 10-62 136-185 (473)
17 3ctu_A CBS domain protein; str 97.3 3.6E-05 1.2E-09 44.8 0.3 44 20-64 6-49 (156)
18 2yvy_A MGTE, Mg2+ transporter 97.3 0.00013 4.5E-09 46.7 2.6 50 10-62 116-165 (278)
19 2emq_A Hypothetical conserved 97.1 9.5E-05 3.3E-09 42.8 0.7 44 20-64 2-45 (157)
20 3k2v_A Putative D-arabinose 5- 97.0 9.8E-05 3.4E-09 42.7 -0.4 51 13-64 9-62 (149)
21 1yav_A Hypothetical protein BS 96.8 0.00024 8.1E-09 41.4 0.5 45 19-64 3-48 (159)
22 4esy_A CBS domain containing m 96.8 0.00045 1.5E-08 40.8 1.7 46 14-64 5-50 (170)
23 2oux_A Magnesium transporter; 96.8 0.00052 1.8E-08 44.3 2.1 49 10-61 118-166 (286)
24 3lqn_A CBS domain protein; csg 96.7 0.00013 4.6E-09 41.9 -1.2 41 23-64 9-49 (150)
25 4gqw_A CBS domain-containing p 96.6 0.00052 1.8E-08 39.0 1.0 37 27-64 3-39 (152)
26 3org_A CMCLC; transporter, tra 96.3 0.00054 1.8E-08 48.9 -0.3 37 27-64 451-488 (632)
27 2rc3_A CBS domain; in SITU pro 96.3 0.0004 1.4E-08 39.2 -0.9 34 30-64 7-41 (135)
28 3sl7_A CBS domain-containing p 96.2 0.0009 3.1E-08 39.2 0.1 36 28-64 3-38 (180)
29 2ef7_A Hypothetical protein ST 95.9 0.0027 9.3E-08 35.5 1.3 36 26-64 1-36 (133)
30 3fhm_A Uncharacterized protein 95.8 0.0011 3.9E-08 38.8 -0.6 42 22-64 17-59 (165)
31 4fry_A Putative signal-transdu 95.8 0.0012 4.1E-08 38.1 -0.5 35 29-64 7-45 (157)
32 2pfi_A Chloride channel protei 95.8 0.0019 6.4E-08 37.2 0.3 43 19-64 3-45 (164)
33 2yzi_A Hypothetical protein PH 95.7 0.0035 1.2E-07 35.3 1.2 38 24-64 2-39 (138)
34 2j9l_A Chloride channel protei 95.4 0.0016 5.6E-08 38.3 -1.0 38 26-64 8-49 (185)
35 3l2b_A Probable manganase-depe 94.9 0.0045 1.5E-07 38.4 -0.0 36 27-64 183-218 (245)
36 3fv6_A YQZB protein; CBS domai 94.9 0.013 4.4E-07 33.9 2.0 39 25-64 77-115 (159)
37 3ddj_A CBS domain-containing p 94.9 0.0081 2.8E-07 37.8 1.1 42 20-64 84-125 (296)
38 1o50_A CBS domain-containing p 94.5 0.0093 3.2E-07 34.4 0.6 37 25-64 12-48 (157)
39 3kh5_A Protein MJ1225; AMPK, A 94.5 0.008 2.7E-07 37.2 0.3 38 24-64 79-116 (280)
40 2p9m_A Hypothetical protein MJ 94.4 0.01 3.6E-07 33.1 0.7 36 26-64 5-40 (138)
41 2rih_A Conserved protein with 94.0 0.022 7.6E-07 32.1 1.6 33 29-64 5-37 (141)
42 1pbj_A Hypothetical protein; s 93.8 0.012 4.2E-07 32.2 0.2 52 10-64 45-97 (125)
43 3fv6_A YQZB protein; CBS domai 93.6 0.023 7.7E-07 32.9 1.1 35 26-64 14-48 (159)
44 1pbj_A Hypothetical protein; s 93.3 0.018 6.2E-07 31.5 0.4 33 29-64 1-33 (125)
45 3kpb_A Uncharacterized protein 93.1 0.014 4.6E-07 32.0 -0.4 33 29-64 1-33 (122)
46 2o16_A Acetoin utilization pro 93.0 0.024 8.3E-07 32.8 0.6 35 27-64 3-37 (160)
47 2rc3_A CBS domain; in SITU pro 92.7 0.047 1.6E-06 30.4 1.5 36 25-63 70-105 (135)
48 1y5h_A Hypothetical protein RV 92.6 0.022 7.6E-07 31.6 0.0 36 26-64 5-40 (133)
49 2d4z_A Chloride channel protei 92.5 0.035 1.2E-06 35.5 0.9 37 25-64 9-45 (250)
50 4fry_A Putative signal-transdu 92.1 0.041 1.4E-06 31.5 0.8 36 26-64 75-110 (157)
51 3gby_A Uncharacterized protein 91.6 0.048 1.6E-06 30.2 0.7 35 27-64 3-37 (128)
52 1pvm_A Conserved hypothetical 91.6 0.11 3.9E-06 30.6 2.3 44 17-63 59-106 (184)
53 2yzi_A Hypothetical protein PH 91.0 0.16 5.6E-06 28.1 2.5 35 26-63 69-103 (138)
54 1pvm_A Conserved hypothetical 90.9 0.067 2.3E-06 31.6 0.9 33 29-64 9-41 (184)
55 1zfj_A Inosine monophosphate d 90.8 0.049 1.7E-06 37.4 0.2 43 14-64 80-122 (491)
56 3lfr_A Putative metal ION tran 90.2 0.076 2.6E-06 29.9 0.6 34 26-63 67-100 (136)
57 1vr9_A CBS domain protein/ACT 89.8 0.057 1.9E-06 33.0 -0.1 34 28-64 71-104 (213)
58 3kpb_A Uncharacterized protein 89.7 0.11 3.8E-06 28.2 1.0 35 27-64 60-94 (122)
59 4fxs_A Inosine-5'-monophosphat 89.7 0.082 2.8E-06 36.9 0.5 44 13-64 78-121 (496)
60 1o50_A CBS domain-containing p 89.5 0.11 3.8E-06 29.7 1.0 35 25-63 92-126 (157)
61 3ddj_A CBS domain-containing p 89.3 0.085 2.9E-06 33.1 0.4 37 24-63 15-51 (296)
62 3k2v_A Putative D-arabinose 5- 89.2 0.087 3E-06 29.9 0.4 52 10-64 75-127 (149)
63 4gqw_A CBS domain-containing p 89.2 0.093 3.2E-06 29.4 0.4 37 25-64 81-117 (152)
64 3lhh_A CBS domain protein; str 88.9 0.52 1.8E-05 27.4 3.7 43 17-63 95-137 (172)
65 3jtf_A Magnesium and cobalt ef 88.6 0.21 7E-06 27.7 1.6 33 27-63 67-99 (129)
66 2o16_A Acetoin utilization pro 88.5 0.3 1E-05 28.1 2.3 35 26-63 75-109 (160)
67 2emq_A Hypothetical conserved 87.8 0.29 9.8E-06 27.7 2.0 34 26-62 80-113 (157)
68 2nyc_A Nuclear protein SNF4; b 87.7 0.11 3.7E-06 28.9 0.0 38 25-63 73-114 (144)
69 3fhm_A Uncharacterized protein 87.1 0.28 9.6E-06 28.3 1.7 37 25-64 89-125 (165)
70 2cu0_A Inosine-5'-monophosphat 87.1 0.27 9.2E-06 33.9 1.8 43 14-64 83-125 (486)
71 2nyc_A Nuclear protein SNF4; b 87.0 0.15 5.2E-06 28.2 0.5 37 25-64 4-43 (144)
72 3pc3_A CG1753, isoform A; CBS, 86.9 0.11 3.8E-06 36.0 -0.2 36 26-64 381-417 (527)
73 2ef7_A Hypothetical protein ST 86.9 0.21 7.2E-06 27.5 1.0 34 27-63 65-98 (133)
74 1me8_A Inosine-5'-monophosphat 86.9 0.12 4.2E-06 35.9 0.0 36 27-63 159-194 (503)
75 2yzq_A Putative uncharacterize 86.8 0.12 3.9E-06 32.0 -0.2 33 29-64 1-33 (282)
76 4avf_A Inosine-5'-monophosphat 86.8 0.13 4.3E-06 35.9 0.0 35 27-62 145-179 (490)
77 3i8n_A Uncharacterized protein 86.6 0.49 1.7E-05 26.1 2.5 33 27-63 70-102 (130)
78 1me8_A Inosine-5'-monophosphat 86.5 0.3 1E-05 34.0 1.8 42 14-64 87-129 (503)
79 1yav_A Hypothetical protein BS 86.4 0.14 4.9E-06 29.3 0.1 34 26-62 83-116 (159)
80 1y5h_A Hypothetical protein RV 86.3 0.1 3.6E-06 28.8 -0.5 35 26-63 71-105 (133)
81 2j9l_A Chloride channel protei 86.3 0.4 1.4E-05 27.7 2.1 35 26-63 105-139 (185)
82 3oco_A Hemolysin-like protein 86.2 0.73 2.5E-05 26.1 3.1 33 27-63 84-116 (153)
83 3lv9_A Putative transporter; C 86.2 0.64 2.2E-05 26.1 2.8 32 28-63 87-118 (148)
84 3l2b_A Probable manganase-depe 85.9 0.2 7E-06 30.7 0.7 34 28-64 6-39 (245)
85 3lqn_A CBS domain protein; csg 85.9 0.47 1.6E-05 26.6 2.2 34 26-62 84-117 (150)
86 3t4n_C Nuclear protein SNF4; C 85.6 0.3 1E-05 30.9 1.3 38 25-63 252-293 (323)
87 2rih_A Conserved protein with 85.2 0.77 2.6E-05 25.5 2.8 33 27-63 69-101 (141)
88 2uv4_A 5'-AMP-activated protei 85.1 0.18 6.1E-06 28.7 0.1 36 27-63 85-124 (152)
89 3oi8_A Uncharacterized protein 85.0 0.24 8.1E-06 28.5 0.6 33 27-63 101-133 (156)
90 3nqr_A Magnesium and cobalt ef 84.7 0.29 9.9E-06 26.9 0.8 33 27-63 67-99 (127)
91 4esy_A CBS domain containing m 83.7 0.16 5.3E-06 29.6 -0.6 35 26-63 102-136 (170)
92 4fxs_A Inosine-5'-monophosphat 82.1 0.15 5E-06 35.6 -1.4 35 27-62 147-181 (496)
93 3usb_A Inosine-5'-monophosphat 82.0 0.073 2.5E-06 37.3 -2.9 33 31-64 109-145 (511)
94 1vrd_A Inosine-5'-monophosphat 80.7 0.32 1.1E-05 33.4 0.0 35 28-63 154-188 (494)
95 4avf_A Inosine-5'-monophosphat 79.8 0.59 2E-05 32.5 1.1 43 14-64 78-120 (490)
96 3kh5_A Protein MJ1225; AMPK, A 79.7 0.38 1.3E-05 29.5 0.1 32 30-64 4-36 (280)
97 2yzq_A Putative uncharacterize 79.7 0.41 1.4E-05 29.5 0.2 36 25-63 217-252 (282)
98 3usb_A Inosine-5'-monophosphat 78.8 0.46 1.6E-05 33.2 0.3 35 27-63 173-207 (511)
99 1jcn_A Inosine monophosphate d 73.8 0.65 2.2E-05 32.1 -0.1 36 27-63 171-206 (514)
100 3kxr_A Magnesium transporter, 73.6 1.1 3.6E-05 27.3 0.9 35 26-63 113-147 (205)
101 3fio_A A cystathionine beta-sy 69.6 3.3 0.00011 20.0 2.1 23 41-64 2-24 (70)
102 1vrd_A Inosine-5'-monophosphat 68.4 2.3 7.8E-05 29.2 1.7 42 15-64 86-127 (494)
103 2yvy_A MGTE, Mg2+ transporter 67.5 1.3 4.6E-05 27.8 0.4 35 26-63 196-230 (278)
104 3ghd_A A cystathionine beta-sy 64.6 4.6 0.00016 20.5 2.1 24 40-64 1-24 (70)
105 2qrd_G Protein C1556.08C; AMPK 62.6 1.6 5.4E-05 27.6 0.0 37 26-63 248-288 (334)
106 2zy9_A Mg2+ transporter MGTE; 59.6 2.3 7.9E-05 29.2 0.4 34 27-63 217-250 (473)
107 4af0_A Inosine-5'-monophosphat 59.6 1.9 6.5E-05 31.0 0.0 32 27-61 198-229 (556)
108 1zfj_A Inosine monophosphate d 53.5 4.7 0.00016 27.5 1.1 35 27-63 150-184 (491)
109 3pc3_A CG1753, isoform A; CBS, 52.8 6.6 0.00023 27.1 1.8 35 25-62 447-481 (527)
110 2cu0_A Inosine-5'-monophosphat 49.2 3.6 0.00012 28.3 0.0 32 28-62 149-180 (486)
111 3org_A CMCLC; transporter, tra 38.3 16 0.00054 26.0 1.9 31 30-63 569-599 (632)
112 2qqr_A JMJC domain-containing 33.2 19 0.00066 20.7 1.4 23 25-49 96-118 (118)
113 2zet_C Melanophilin; complex, 26.5 38 0.0013 20.1 2.0 16 10-25 15-30 (153)
114 1xw3_A Sulfiredoxin; retroredu 24.0 1E+02 0.0035 17.2 3.7 31 29-60 9-40 (110)
115 3bc1_B Synaptotagmin-like prot 21.5 32 0.0011 17.5 0.8 16 10-25 1-16 (59)
116 3tuo_A DNA-binding protein SAT 21.2 75 0.0026 18.0 2.4 24 40-64 31-55 (105)
117 4a4j_A Pacszia, cation-transpo 21.0 63 0.0022 14.9 1.9 19 45-64 47-65 (69)
118 2ba3_A NIKA; dimer, bacterial 20.7 21 0.00073 16.7 0.0 24 12-35 22-45 (51)
119 3mhy_A PII-like protein PZ; PI 20.2 59 0.002 17.9 1.8 29 35-64 55-83 (112)
No 1
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.18 E-value=1e-11 Score=75.70 Aligned_cols=58 Identities=19% Similarity=0.269 Sum_probs=51.4
Q ss_pred ccccCCCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 6 TTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 6 ~~~~g~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
++++|.|+++|++++.+++.|.+.+|+++|+|+.++++++.+.++. ++++.+.++||+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~ 70 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHS 70 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCS
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCC
Confidence 4778999999999999999999999999999999999999999999 799999999886
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.18 E-value=1e-11 Score=73.79 Aligned_cols=58 Identities=12% Similarity=0.193 Sum_probs=54.7
Q ss_pred ccccCCCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 6 TTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 6 ~~~~g~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
++++|.++++|++++.++++|++.+|+++|+|+.++++++.+.++. ++++.+.++||+
T Consensus 15 ~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~ 72 (156)
T 3oi8_A 15 AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHS 72 (156)
T ss_dssp HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCS
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCC
Confidence 4678999999999999999999999999999999999999999999 799999998875
No 3
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.07 E-value=3.5e-11 Score=70.49 Aligned_cols=56 Identities=9% Similarity=0.193 Sum_probs=38.3
Q ss_pred ccCCCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 8 EFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 8 ~~g~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
++|.|+++|++++.++++|.+.+|+++|+|+.++++++.+.++. ++++.+.+++++
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~ 57 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVT 57 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCS
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCC
Confidence 57889999999999999999999999999999999999999999 799999999875
No 4
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.03 E-value=3.9e-11 Score=72.36 Aligned_cols=58 Identities=17% Similarity=0.352 Sum_probs=32.3
Q ss_pred ccccCCCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 6 TTEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 6 ~~~~g~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+++.|.++++|++++.+++.|.+.+|+++|+|+.++++++.+.++. ++++.+.++||+
T Consensus 19 ~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~ 76 (172)
T 3lhh_A 19 GSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHS 76 (172)
T ss_dssp ------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCS
T ss_pred HHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCC
Confidence 3678889999999999999999999999999999999999999999 799999998875
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.74 E-value=6.2e-10 Score=65.62 Aligned_cols=53 Identities=15% Similarity=0.368 Sum_probs=45.0
Q ss_pred CCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 11 DLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 11 ~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.++++|++++.++++|++.+|+++|+||.++++++.+.++. ++++.+.++|++
T Consensus 2 ~l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~ 54 (153)
T 3oco_A 2 NADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYS 54 (153)
T ss_dssp ------CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCS
T ss_pred CcCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCC
Confidence 36788999999999999999999999999999999999999 799999998875
No 6
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.71 E-value=1.3e-09 Score=70.28 Aligned_cols=58 Identities=7% Similarity=0.127 Sum_probs=52.8
Q ss_pred ccccCCCCHHHHHHHHhhhcc-cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 6 TTEFNDLEKDEVNIISGALEL-RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 6 ~~~~g~l~~~e~~ml~~~l~~-~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
..+.+.++++|+++++++++| ++++|.|+|+|+.++++++.+.++. ++++.+.++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~ 64 (323)
T 3t4n_C 6 QDSQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIV 64 (323)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCS
T ss_pred CCCCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCc
Confidence 356677889999999999999 9999999999999999999999999 799999999875
No 7
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.60 E-value=1.2e-08 Score=66.05 Aligned_cols=54 Identities=9% Similarity=0.125 Sum_probs=49.5
Q ss_pred CCCCHHHHHHHHhhhcccC-eeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 10 NDLEKDEVNIISGALELRR-KIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 10 g~l~~~e~~ml~~~l~~~~-~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+.+++++..+++++++|-+ ++|+|+|+||.++++++.+.++. ++++.+.++|||
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~ 56 (334)
T 2qrd_G 2 MDVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIV 56 (334)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCS
T ss_pred CCCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCe
Confidence 4577889999999999655 99999999999999999999999 799999999986
No 8
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.24 E-value=1.5e-07 Score=56.16 Aligned_cols=46 Identities=11% Similarity=0.052 Sum_probs=40.5
Q ss_pred HHHHhhhc-ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 18 NIISGALE-LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 18 ~ml~~~l~-~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.||.+.|+ |-.+.++++|||+.++++++.+.++. ++++.+.++|||
T Consensus 3 ami~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s 49 (156)
T 3k6e_A 3 AMIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYT 49 (156)
T ss_dssp HHHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSS
T ss_pred chHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCc
Confidence 46666663 77789999999999999999999999 799999999987
No 9
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.13 E-value=2.5e-07 Score=59.83 Aligned_cols=55 Identities=2% Similarity=0.108 Sum_probs=42.6
Q ss_pred cccCCCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 7 TEFNDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 7 ~~~g~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
...|.+.+.+.+.+.+. |.+++|+|+|+|+.++++++.+.++. ++++.+.++||+
T Consensus 15 ~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~ 69 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVR 69 (330)
T ss_dssp --------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCS
T ss_pred hHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCc
Confidence 55666777777778887 57899999999999999999999999 799999999885
No 10
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.03 E-value=3.3e-06 Score=52.46 Aligned_cols=48 Identities=8% Similarity=0.064 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhc
Q psy4850 11 DLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61 (64)
Q Consensus 11 ~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~ 61 (64)
.++++++++++++|.|.+.+|+++|+| ++++++.+.++. ++++.+.+.
T Consensus 36 ~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~ 83 (205)
T 3kxr_A 36 QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRI 83 (205)
T ss_dssp HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHC
T ss_pred cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhh
Confidence 368999999999999999999999998 799999999999 799998874
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.86 E-value=1.9e-06 Score=49.09 Aligned_cols=39 Identities=15% Similarity=0.126 Sum_probs=31.9
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+|.+++|+++|+|+.++++++.+.++. ++++.+.++||+
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~ 40 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFS 40 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCS
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCC
Confidence 478999999999999999999999999 799999988875
No 12
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.85 E-value=3.7e-06 Score=47.92 Aligned_cols=38 Identities=16% Similarity=0.271 Sum_probs=33.9
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.++.+|+++|+|+.++++++.+.++. ++++.+.++||+
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~ 39 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHS 39 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCS
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCC
Confidence 46889999999999999999999999 799999999875
No 13
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.82 E-value=5e-06 Score=47.57 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=33.0
Q ss_pred CeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 28 RKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 28 ~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+.+|+++|+|+.++++++.+.++. ++++.+.++|||
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~ 36 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHG 36 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSS
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCC
Confidence 368999999999999999999999 799999999885
No 14
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.81 E-value=3.9e-06 Score=48.31 Aligned_cols=37 Identities=11% Similarity=0.141 Sum_probs=32.9
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
++++|+++|+|+.++++++.+.++. ++++.+.++||+
T Consensus 1 ~~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~ 37 (136)
T 3lfr_A 1 ADLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHS 37 (136)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCS
T ss_pred CCCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCC
Confidence 3688999999999999999999999 799999998875
No 15
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.62 E-value=1.1e-05 Score=45.67 Aligned_cols=37 Identities=24% Similarity=0.329 Sum_probs=32.8
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
++++|+++|+|+.++++++.+.++. ++++.+.+++++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~ 37 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHS 37 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCS
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCC
Confidence 4688999999999999999999999 799999998875
No 16
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.39 E-value=0.00011 Score=50.94 Aligned_cols=50 Identities=10% Similarity=0.151 Sum_probs=46.5
Q ss_pred CCCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcC
Q psy4850 10 NDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSE 62 (64)
Q Consensus 10 g~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g 62 (64)
+.+++++++.+.+++++.+.+|+++|+| ++++++.+.++. ++++.+.++|
T Consensus 136 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~~~~ 185 (473)
T 2zy9_A 136 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAA 185 (473)
T ss_dssp TSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHHHHG
T ss_pred hcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHHhcc
Confidence 6789999999999999999999999998 899999999999 7999998864
No 17
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.33 E-value=3.6e-05 Score=44.76 Aligned_cols=44 Identities=7% Similarity=-0.085 Sum_probs=38.3
Q ss_pred HHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 20 ISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 20 l~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
-....+|...+|+++|+|+.++++++.+.++. ++++.+.+++++
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~ 49 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYT 49 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSS
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCc
Confidence 34556788899999999999999999999999 799999888764
No 18
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.28 E-value=0.00013 Score=46.68 Aligned_cols=50 Identities=10% Similarity=0.151 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcC
Q psy4850 10 NDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSE 62 (64)
Q Consensus 10 g~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g 62 (64)
+.++..++..+.+++.+.+.+|+++|+| ++++++.+.++. ++++.+.+++
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~ 165 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAA 165 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHcc
Confidence 4578899999999999999999999998 899999999999 7999998874
No 19
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.14 E-value=9.5e-05 Score=42.77 Aligned_cols=44 Identities=14% Similarity=0.077 Sum_probs=33.4
Q ss_pred HHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 20 ISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 20 l~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
..+...|...+|+++|+|+.++++++.+.++. ++++.+.+++++
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~ 45 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYS 45 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSS
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCce
Confidence 35566788999999999999999999999998 799999988864
No 20
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=96.95 E-value=9.8e-05 Score=42.71 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=34.4
Q ss_pred CHHHHHHHHhhhcccCe---eecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 13 EKDEVNIISGALELRRK---IVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 13 ~~~e~~ml~~~l~~~~~---~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.+++....+..-.++.. +|+++|+|+.++.+++.+.++. ++++.+.+++++
T Consensus 9 ~~~~~~~~~~~~~l~~~l~~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~ 62 (149)
T 3k2v_A 9 TAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLG 62 (149)
T ss_dssp -----------CHHHHHTTSBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSS
T ss_pred CHHHhhhcCCCchhchhcccCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCc
Confidence 34445555555445444 9999999999999999999999 799999988764
No 21
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=96.83 E-value=0.00024 Score=41.39 Aligned_cols=45 Identities=20% Similarity=0.215 Sum_probs=34.9
Q ss_pred HHHhh-hcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 19 IISGA-LELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 19 ml~~~-l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
|+.+. ..|...+|+++|+|+.++++++.+.++. ++++.+.+++++
T Consensus 3 ~~~~~~~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~ 48 (159)
T 1yav_A 3 LISLQSDQLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYT 48 (159)
T ss_dssp --------CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCS
T ss_pred hHHHHHHHHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCc
Confidence 34443 3688899999999999999999999999 799999888764
No 22
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=96.82 E-value=0.00045 Score=40.81 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=37.8
Q ss_pred HHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 14 KDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 14 ~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+..+..+.++ +++.+|+|||++ ++++++.+.++. ++++.+.+++++
T Consensus 5 ~~~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~ 50 (170)
T 4esy_A 5 QARRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIG 50 (170)
T ss_dssp HHHHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCS
T ss_pred HHHHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCe
Confidence 3445566665 468999999986 789999999999 799999999875
No 23
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=96.81 E-value=0.00052 Score=44.29 Aligned_cols=49 Identities=14% Similarity=0.224 Sum_probs=44.5
Q ss_pred CCCCHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhc
Q psy4850 10 NDLEKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61 (64)
Q Consensus 10 g~l~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~ 61 (64)
+.++.+++..+.+++.+.+.+|+++|+| ++++++.+.++. ++++.+.+.
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~ 166 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQ 166 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHc
Confidence 3578888999999999999999999997 799999999999 799999886
No 24
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=96.70 E-value=0.00013 Score=41.91 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=36.4
Q ss_pred hhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 23 ALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 23 ~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.-.|...+|+++|+|..++.+++.+.++. ++++.+.+++++
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~ 49 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYS 49 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCS
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCc
Confidence 44578899999999999999999999999 799999988864
No 25
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=96.63 E-value=0.00052 Score=39.04 Aligned_cols=37 Identities=24% Similarity=0.347 Sum_probs=33.4
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+..+|+++|+|+.++++++.+.++. ++++.+.+++++
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~ 39 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRIT 39 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCS
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCc
Confidence 4678999999999999999999999 799999988864
No 26
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=96.33 E-value=0.00054 Score=48.87 Aligned_cols=37 Identities=11% Similarity=-0.015 Sum_probs=33.8
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHH-hcCCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIM-KSESK 64 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~-~~g~S 64 (64)
.+.+|+|+|+||.++.+++.+.++. ++++.+. +++|+
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~ 488 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRL 488 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCC
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcc
Confidence 6789999999999999999999999 7999998 68775
No 27
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=96.28 E-value=0.0004 Score=39.20 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=30.8
Q ss_pred eecceeeec-ccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 30 IVGDVMTKL-EDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 30 ~v~dvM~Pr-~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+|+++|+|+ .++.+++.+.++. ++++.+.+++++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~ 41 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIG 41 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCC
Confidence 899999998 8999999999999 799999888764
No 28
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=96.16 E-value=0.0009 Score=39.17 Aligned_cols=36 Identities=17% Similarity=0.310 Sum_probs=32.4
Q ss_pred CeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 28 RKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 28 ~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
-.+|+++|+|+.++++++.+.++. ++++.+.+++++
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~ 38 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVT 38 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCS
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCC
Confidence 368999999999999999999999 799999988864
No 29
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=95.89 E-value=0.0027 Score=35.49 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=31.1
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
|.+.+|+++|+| ++.+++.+.++. ++++.+.++|++
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~ 36 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIG 36 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCS
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCC
Confidence 467899999998 588899999998 799999888764
No 30
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=95.80 E-value=0.0011 Score=38.80 Aligned_cols=42 Identities=14% Similarity=0.155 Sum_probs=36.5
Q ss_pred hhhcccCeeecceeeec-ccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 22 GALELRRKIVGDVMTKL-EDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 22 ~~l~~~~~~v~dvM~Pr-~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
....+...+|+++|+|+ .++.+++.+.++. ++++.+.+++++
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~ 59 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIG 59 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCS
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCC
Confidence 45578889999999997 8899999999999 799999888764
No 31
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=95.79 E-value=0.0012 Score=38.14 Aligned_cols=35 Identities=6% Similarity=0.237 Sum_probs=31.6
Q ss_pred eeecceeeec----ccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 29 KIVGDVMTKL----EDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 29 ~~v~dvM~Pr----~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
++|+|+|+|+ .++.+++.+.++. ++++.+.+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~ 45 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIG 45 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCS
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCC
Confidence 6899999999 8999999999999 799999988764
No 32
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=95.76 E-value=0.0019 Score=37.24 Aligned_cols=43 Identities=19% Similarity=0.281 Sum_probs=32.2
Q ss_pred HHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 19 IISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 19 ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+..+.+.+...+|+++|+| ++++++.+.++. ++++.+.+++++
T Consensus 3 l~~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~ 45 (164)
T 2pfi_A 3 ILGRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVT 45 (164)
T ss_dssp -------CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCS
T ss_pred CccccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCC
Confidence 3455677889999999998 788899999999 799999988764
No 33
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=95.67 E-value=0.0035 Score=35.25 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=32.5
Q ss_pred hcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 24 LELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 24 l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+.|...+|+++|++ ++.+++.+.++. ++++.+.+++++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~ 39 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVG 39 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCS
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCC
Confidence 56889999999985 788999999999 799999888764
No 34
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=95.36 E-value=0.0016 Score=38.28 Aligned_cols=38 Identities=11% Similarity=0.186 Sum_probs=32.4
Q ss_pred ccCeeecceeeeccc--EEEE--eCCCCCCHHHHHHHHhcCCC
Q psy4850 26 LRRKIVGDVMTKLED--VYML--SYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~--v~~l--~~~~~~~~e~l~~i~~~g~S 64 (64)
+...+|+++|+|..+ ++++ +.+.++. ++++.+.+++++
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~ 49 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYS 49 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCS
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCC
Confidence 367899999999866 7778 9999999 799999988874
No 35
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=94.92 E-value=0.0045 Score=38.41 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=32.3
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
...+|+++|+| .++.+++.+.++. ++++.+.+++|+
T Consensus 183 ~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~~ 218 (245)
T 3l2b_A 183 QSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRYS 218 (245)
T ss_dssp GGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCCS
T ss_pred cCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCCc
Confidence 45789999999 8999999999998 799999998875
No 36
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=94.89 E-value=0.013 Score=33.94 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=34.4
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
...+.+|+++|+|+.++++++.+.++. ++++.+.+++++
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~ 115 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQID 115 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCS
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCc
Confidence 457889999999999999999999999 799999887753
No 37
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=94.85 E-value=0.0081 Score=37.83 Aligned_cols=42 Identities=7% Similarity=-0.028 Sum_probs=35.3
Q ss_pred HHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 20 ISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 20 l~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
..+.+.+.+.+|+++|+| ++++++.+.++. ++++.+.++|++
T Consensus 84 ~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~ 125 (296)
T 3ddj_A 84 QGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFG 125 (296)
T ss_dssp HHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCS
T ss_pred chhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCC
Confidence 344566778999999998 688999999998 799999988864
No 38
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=94.47 E-value=0.0093 Score=34.43 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=31.7
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.+...+|+++|++ ++.+++.+.++. ++++.+.+++++
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~ 48 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVT 48 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTC
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCC
Confidence 3567889999987 799999999999 799999888764
No 39
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=94.47 E-value=0.008 Score=37.19 Aligned_cols=38 Identities=21% Similarity=0.327 Sum_probs=32.7
Q ss_pred hcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 24 LELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 24 l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+...+.+|+++|+| ++++++.+.++. ++++.+.++|++
T Consensus 79 ~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~ 116 (280)
T 3kh5_A 79 LAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVG 116 (280)
T ss_dssp HHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCS
T ss_pred hHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCC
Confidence 44557899999998 889999999999 799999998874
No 40
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=94.40 E-value=0.01 Score=33.15 Aligned_cols=36 Identities=28% Similarity=0.290 Sum_probs=30.8
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
|.+.+|+++|+| ++.+++.+.++. ++++.+.+++++
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~ 40 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKIS 40 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCc
Confidence 568899999986 688899999998 799999887764
No 41
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=94.04 E-value=0.022 Score=32.09 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=29.0
Q ss_pred eeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 29 KIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 29 ~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.+|+++|+| ++.+++.+.++. ++++.+.+++++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~ 37 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVG 37 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCS
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCC
Confidence 689999996 789999999999 799999888764
No 42
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=93.82 E-value=0.012 Score=32.22 Aligned_cols=52 Identities=19% Similarity=0.212 Sum_probs=38.2
Q ss_pred CCCCHHH-HHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 10 NDLEKDE-VNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 10 g~l~~~e-~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
|.++..+ .+.+.+-..+.+.+|+++|.| .+..++.+.++. ++++.+.+++++
T Consensus 45 G~it~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~ 97 (125)
T 1pbj_A 45 GIVTTWDVLEAIAEGDDLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVW 97 (125)
T ss_dssp EEEEHHHHHHHHHHTCCTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCS
T ss_pred EEEeHHHHHHHHhcCCcccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCc
Confidence 4555444 233333345678899999997 678999999999 799999888753
No 43
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=93.59 E-value=0.023 Score=32.89 Aligned_cols=35 Identities=9% Similarity=0.175 Sum_probs=29.6
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
|...+|+++|++ .++++.+.++. ++++.+.+++++
T Consensus 14 l~~~~v~~im~~---~~~v~~~~~~~-~a~~~m~~~~~~ 48 (159)
T 3fv6_A 14 LKKLQVKDFQSI---PVVIHENVSVY-DAICTMFLEDVG 48 (159)
T ss_dssp HTTCBGGGSCBC---CCEEETTSBHH-HHHHHHHHHTCS
T ss_pred HhhCCHHHHcCC---CEEECCCCcHH-HHHHHHHHCCCC
Confidence 567899999996 34899999999 799999888764
No 44
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=93.31 E-value=0.018 Score=31.51 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=27.8
Q ss_pred eeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 29 KIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 29 ~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.+|+++|+| ++.+++.+.++. ++++.+.+++++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~ 33 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKG 33 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCC
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCC
Confidence 368899987 788999999999 799999887764
No 45
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=93.09 E-value=0.014 Score=31.99 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=28.0
Q ss_pred eeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 29 KIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 29 ~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
++|+++|+| ++.+++.+.++. ++++.+.+++++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~ 33 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNIN 33 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCS
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCC
Confidence 468999997 588899999999 799999888764
No 46
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=93.01 E-value=0.024 Score=32.84 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=30.0
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
...+|+++|+| ++++++.+.++. ++++.+.+++++
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~ 37 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIR 37 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCS
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCC
Confidence 45789999997 788899999998 799999888764
No 47
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=92.71 E-value=0.047 Score=30.37 Aligned_cols=36 Identities=14% Similarity=0.274 Sum_probs=31.0
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
...+.+|+++|+| .+.+++.+.++. ++++.+.++++
T Consensus 70 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~ 105 (135)
T 2rc3_A 70 PVKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRV 105 (135)
T ss_dssp CGGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTC
T ss_pred CcccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCC
Confidence 4678899999997 678899999998 79999988775
No 48
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=92.55 E-value=0.022 Score=31.62 Aligned_cols=36 Identities=11% Similarity=0.138 Sum_probs=28.7
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+.-++|+++|++ ++.+++.+.++. ++++.+.+++++
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~ 40 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIG 40 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCS
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCC
Confidence 445789999997 788899999999 799999887764
No 49
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=92.50 E-value=0.035 Score=35.54 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=32.0
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.....+|+|||++ +++++..+.++. ++.+.+.+++|+
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~ 45 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLK 45 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCS
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCC
Confidence 4567899999986 799999999999 799999988874
No 50
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=92.15 E-value=0.041 Score=31.46 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=31.3
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
..+.+|+++|+| ++.+++.+.++. ++++.+.+++++
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~ 110 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMR 110 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCS
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCC
Confidence 568999999997 688999999999 799999988763
No 51
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=91.61 E-value=0.048 Score=30.23 Aligned_cols=35 Identities=3% Similarity=-0.034 Sum_probs=29.7
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
...+|+++|++. +..++.+.++. ++++.+.+++++
T Consensus 3 ~s~~v~~~m~~~--~~~v~~~~~~~-~a~~~~~~~~~~ 37 (128)
T 3gby_A 3 ASVTFSYLAETD--YPVFTLGGSTA-DAARRLAASGCA 37 (128)
T ss_dssp TTCBGGGGCBCC--SCCEETTSBHH-HHHHHHHHHTCS
T ss_pred cceEHHHhhcCC--cceECCCCCHH-HHHHHHHHCCCc
Confidence 467899999876 77889999999 799999988764
No 52
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=91.58 E-value=0.11 Score=30.58 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=34.3
Q ss_pred HHHHHhhh----cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 17 VNIISGAL----ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 17 ~~ml~~~l----~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+++.... ...+.+|+++|.| .+.+++.+.++. ++++.+.++++
T Consensus 59 ~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~ 106 (184)
T 1pvm_A 59 RSIIKRFIPRNKKPDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGL 106 (184)
T ss_dssp HHHHHHTGGGCCCGGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTC
T ss_pred HHHHHHHhhcccCcccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCC
Confidence 34454444 3567899999987 678999999999 79999988775
No 53
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=90.96 E-value=0.16 Score=28.11 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=29.9
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
..+.+|+++|.| ...+++.+.++. ++++.+.++++
T Consensus 69 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~ 103 (138)
T 2yzi_A 69 PYDIPVERIMTR--NLITANVNTPLG-EVLRKMAEHRI 103 (138)
T ss_dssp CTTSBGGGTCBC--SCCEEETTSBHH-HHHHHHHHHTC
T ss_pred cccCCHHHHhhC--CCeEECCCCcHH-HHHHHHHhcCC
Confidence 457899999987 678999999999 79999988775
No 54
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=90.91 E-value=0.067 Score=31.59 Aligned_cols=33 Identities=9% Similarity=0.163 Sum_probs=29.1
Q ss_pred eeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 29 KIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 29 ~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.+|+++|++ ++++++.+.++. ++++.+.+++++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~ 41 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLY 41 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCC
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCC
Confidence 789999984 799999999999 799999888764
No 55
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=90.84 E-value=0.049 Score=37.37 Aligned_cols=43 Identities=7% Similarity=0.101 Sum_probs=36.8
Q ss_pred HHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 14 KDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 14 ~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+++++++.+++++ +++|+| ++++++.+.++. ++++.+.+++++
T Consensus 80 e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~ 122 (491)
T 1zfj_A 80 TEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRIS 122 (491)
T ss_dssp HHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTCS
T ss_pred HHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCCC
Confidence 6778899988876 679997 889999999998 799999988774
No 56
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=90.16 E-value=0.076 Score=29.86 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=29.0
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
..+.+++++|.| +.+++.+.++. ++++.+.+++.
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~ 100 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHN 100 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTC
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCC
Confidence 457789999976 78999999998 79999988764
No 57
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=89.84 E-value=0.057 Score=33.01 Aligned_cols=34 Identities=3% Similarity=0.062 Sum_probs=29.0
Q ss_pred CeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 28 RKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 28 ~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+.+|+++|+| ++++++.+.++. ++++.+.+++++
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~ 104 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEP 104 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCS
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCC
Confidence 3469999998 788999999999 799999988764
No 58
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=89.70 E-value=0.11 Score=28.17 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=29.1
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
...+++++|.| .+..++.+.++. ++++.+.+++++
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~ 94 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNIS 94 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCS
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCC
Confidence 45589999987 678899999999 799999887753
No 59
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=89.65 E-value=0.082 Score=36.90 Aligned_cols=44 Identities=5% Similarity=-0.007 Sum_probs=36.2
Q ss_pred CHHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 13 EKDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 13 ~~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.+++.+++.++ ++++++|+ .++++++.+.++. ++++.+.+++||
T Consensus 78 ~e~qa~~V~~V-----k~~~~~m~--~d~v~v~~~~tv~-ea~~~m~~~~~s 121 (496)
T 4fxs_A 78 IEQQAAQVHQV-----KIFEAGVV--THPVTVRPEQTIA-DVMELTHYHGFA 121 (496)
T ss_dssp HHHHHHHHHHH-----HHCCC--C--BCCCCBCSSSBHH-HHHHHHTSSCCC
T ss_pred HHHHHHHHHhc-----cccccccc--cCceEECCCCCHH-HHHHHHHHcCCc
Confidence 46778899998 66788998 6889999999999 799999999886
No 60
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=89.52 E-value=0.11 Score=29.75 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=30.3
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
...+.+|+++|+| +.+++.+.++. ++++.+.++++
T Consensus 92 ~~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~ 126 (157)
T 1o50_A 92 RLIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNI 126 (157)
T ss_dssp CCSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTC
T ss_pred HHcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCC
Confidence 3567899999998 78999999999 79999988775
No 61
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=89.29 E-value=0.085 Score=33.06 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=31.7
Q ss_pred hcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 24 LELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 24 l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
......+|+|+|++ ++.+++.+.++. ++++.+.+.++
T Consensus 15 ~~~~~~~V~dim~~--~~~~v~~~~~v~-~a~~~m~~~~~ 51 (296)
T 3ddj_A 15 LYFQGMNIETLMIK--NPPILSKEDRLG-SAFKKINEGGI 51 (296)
T ss_dssp CTTCCSSGGGTCEE--SCCEECTTSBHH-HHHHHTTGGGC
T ss_pred hhhcccCHHHhccC--CCcEECCCccHH-HHHHHHHHCCC
Confidence 35667899999998 789999999999 79999888765
No 62
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=89.22 E-value=0.087 Score=29.94 Aligned_cols=52 Identities=10% Similarity=0.174 Sum_probs=36.4
Q ss_pred CCCCHHH-HHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 10 NDLEKDE-VNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 10 g~l~~~e-~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
|.++..+ .+.+..-..+.+.+|+++|.|. +..++.+.++. ++++.+.+++++
T Consensus 75 Givt~~dl~~~~~~~~~~~~~~v~~~m~~~--~~~v~~~~~l~-~a~~~m~~~~~~ 127 (149)
T 3k2v_A 75 GIFTDGDLRRVFDTGVDMRDASIADVMTRG--GIRIRPGTLAV-DALNLMQSRHIT 127 (149)
T ss_dssp EEEEHHHHHHHHCSSSCCTTCBHHHHSEES--CCEECTTCBHH-HHHHHHHHHTCS
T ss_pred EEecHHHHHHHHhcCCCcccCcHHHHcCCC--CeEECCCCCHH-HHHHHHHHcCCC
Confidence 4454433 2223333345788999999875 57899999998 799999988763
No 63
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=89.16 E-value=0.093 Score=29.37 Aligned_cols=37 Identities=19% Similarity=0.387 Sum_probs=29.3
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.....+|+++|.| .+++++.+.++. ++++.+.+++++
T Consensus 81 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~ 117 (152)
T 4gqw_A 81 KTNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYR 117 (152)
T ss_dssp ---CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCC
T ss_pred HhccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCC
Confidence 3456889999998 567899999999 799999988763
No 64
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=88.91 E-value=0.52 Score=27.44 Aligned_cols=43 Identities=12% Similarity=0.110 Sum_probs=32.3
Q ss_pred HHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 17 VNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 17 ~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
++++.....-.+.+|+++| ..+.+++.+.++. ++++.+.+++.
T Consensus 95 ~dl~~~~~~~~~~~v~~im---~~~~~v~~~~~l~-~a~~~m~~~~~ 137 (172)
T 3lhh_A 95 KQLLSESIAGERLELVDLV---KNCNFVPNSLSGM-ELLEHFRTTGS 137 (172)
T ss_dssp HHHHHHHHTTCCCCGGGGC---BCCEEEETTCCHH-HHHHHHHHHTC
T ss_pred HHHHHHHhhcCcccHHHHh---cCCeEeCCCCCHH-HHHHHHHHcCC
Confidence 3444444433578999999 4678999999999 79999988764
No 65
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=88.59 E-value=0.21 Score=27.70 Aligned_cols=33 Identities=9% Similarity=0.041 Sum_probs=28.1
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+++++|.| ..+++.+.++. ++++.+.+++.
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~ 99 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRN 99 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSC
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCC
Confidence 56789999976 78999999998 79999988764
No 66
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=88.47 E-value=0.3 Score=28.08 Aligned_cols=35 Identities=23% Similarity=0.124 Sum_probs=29.9
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
..+.+|+++|.| .+.+++.+.++. ++++.+.+++.
T Consensus 75 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~ 109 (160)
T 2o16_A 75 AFETPLFEVMHT--DVTSVAPQAGLK-ESAIYMQKHKI 109 (160)
T ss_dssp -CCCBHHHHSCS--CEEEBCTTSBHH-HHHHHHHHTTC
T ss_pred hcccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCC
Confidence 457899999996 789999999999 79999988774
No 67
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=87.82 E-value=0.29 Score=27.68 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=29.2
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSE 62 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g 62 (64)
+...+|+++|.| .+.+++.+.++. ++++.+.+++
T Consensus 80 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~ 113 (157)
T 2emq_A 80 LETMKVEEVMNR--NIPRLRLDDSLM-KAVGLIVNHP 113 (157)
T ss_dssp GGTCBGGGTCBC--CCCEEETTSBHH-HHHHHHHHSS
T ss_pred hcCCcHHHHhCC--CCceecCCCcHH-HHHHHHhhCC
Confidence 467899999997 678999999999 7999988765
No 68
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=87.67 E-value=0.11 Score=28.90 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=29.5
Q ss_pred cccCeeecceeeecc----cEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 25 ELRRKIVGDVMTKLE----DVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~----~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
...+.+|+++|++.. ++.+++.+.++. ++++.+.++++
T Consensus 73 ~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~ 114 (144)
T 2nyc_A 73 NDLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKARV 114 (144)
T ss_dssp --CCSBHHHHHHHCC------CEECTTSBHH-HHHHHHHHHTC
T ss_pred ccCCccHHHHHhcCccccCCCeEECCCCcHH-HHHHHHHHCCC
Confidence 345789999999864 789999999999 79999988765
No 69
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=87.13 E-value=0.28 Score=28.26 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=31.4
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
...+.+|+++|.+ ++.+++.+.++. ++++.+.+++++
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~ 125 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFR 125 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCS
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCC
Confidence 5678999999994 678899999999 799999988763
No 70
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=87.11 E-value=0.27 Score=33.92 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=11.8
Q ss_pred HHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 14 KDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 14 ~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+++++++.+++++.+ +|+ .++++++.+.++. ++++.+.+++||
T Consensus 83 e~~~~~I~~v~~~~~-----~m~--~~~~~v~~~~tv~-ea~~~~~~~~~~ 125 (486)
T 2cu0_A 83 EEQVEQVKRVKRAER-----LIV--EDVITIAPDETVD-FALFLMEKHGID 125 (486)
T ss_dssp HHHHHHHHHHHTCC-------------------------------------
T ss_pred HHHHHHHHhhcchhh-----ccc--cCceEECCCCCHH-HHHHHHHHcCCc
Confidence 577899999998855 687 5899999999999 799999888764
No 71
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=87.02 E-value=0.15 Score=28.24 Aligned_cols=37 Identities=5% Similarity=0.184 Sum_probs=30.5
Q ss_pred cccCeeecc---eeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 25 ELRRKIVGD---VMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 25 ~~~~~~v~d---vM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
++-++++++ +|+ .++++++.+.++. ++++.+.+++++
T Consensus 4 ~~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~~ 43 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVS 43 (144)
T ss_dssp GGGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTCS
T ss_pred chhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCcc
Confidence 456788999 665 6799999999999 799999888764
No 72
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=86.88 E-value=0.11 Score=36.03 Aligned_cols=36 Identities=8% Similarity=0.073 Sum_probs=31.0
Q ss_pred ccCeeecceeeecccEEEEeCC-CCCCHHHHHHHHhcCCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYD-AILDFETVSEIMKSESK 64 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~-~~~~~e~l~~i~~~g~S 64 (64)
|.+.+|+++|++ ++++++.+ .++. ++++.+.+++++
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~ 417 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVD 417 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCS
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCC
Confidence 557899999985 68889999 9999 799999998875
No 73
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=86.88 E-value=0.21 Score=27.47 Aligned_cols=34 Identities=9% Similarity=0.101 Sum_probs=29.1
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+++++|.| .+..++.+.++. ++++.+.++++
T Consensus 65 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~ 98 (133)
T 2ef7_A 65 LETKAEEFMTA--SLITIREDSPIT-GALALMRQFNI 98 (133)
T ss_dssp TTCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTC
T ss_pred cccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 36789999987 678899999999 79999988775
No 74
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=86.85 E-value=0.12 Score=35.88 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=0.0
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+|+++|+|..++++++.+.++. ++++.+.+++.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i 194 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKL 194 (503)
T ss_dssp -------------------------------------
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCC
Confidence 3567999999999999999999999 79998887653
No 75
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=86.79 E-value=0.12 Score=32.01 Aligned_cols=33 Identities=15% Similarity=0.154 Sum_probs=17.3
Q ss_pred eeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 29 KIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 29 ~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
.+|+++|+ .++++++.+.++. ++++.+.+++++
T Consensus 1 m~v~~im~--~~~~~v~~~~~~~-~a~~~~~~~~~~ 33 (282)
T 2yzq_A 1 MRVKTIMT--QNPVTITLPATRN-YALELFKKYKVR 33 (282)
T ss_dssp CBHHHHSE--ESCCCEESSCC-------------CC
T ss_pred CchHHhcc--CCCeEECCCCcHH-HHHHHHHHcCCC
Confidence 36889999 4788899999999 799999888764
No 76
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=86.77 E-value=0.13 Score=35.86 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=0.0
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSE 62 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g 62 (64)
.+.+|+++|+|+.++++++.+.++. ++++.+.+++
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~ 179 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENR 179 (490)
T ss_dssp ------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcC
Confidence 4567999999998999999999999 7998887765
No 77
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=86.57 E-value=0.49 Score=26.06 Aligned_cols=33 Identities=18% Similarity=0.324 Sum_probs=28.0
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+++++|.| +.+++.+.++. ++++.+.+++.
T Consensus 70 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~ 102 (130)
T 3i8n_A 70 GQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHRL 102 (130)
T ss_dssp TTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHTC
T ss_pred CcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcCC
Confidence 47889999965 67999999999 79999988764
No 78
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=86.52 E-value=0.3 Score=33.98 Aligned_cols=42 Identities=2% Similarity=0.107 Sum_probs=9.6
Q ss_pred HHHHHHHHhhhcccCeeecce-eeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 14 KDEVNIISGALELRRKIVGDV-MTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 14 ~~e~~ml~~~l~~~~~~v~dv-M~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+++.+++.++..+ ++ |+| ++++++.+.++. ++++.+.+++||
T Consensus 87 e~~~~~v~~V~~~------e~gM~~--~~~~v~~~~tv~-eal~~m~~~~~s 129 (503)
T 1me8_A 87 ESQAAMVHAVKNF------KAGFVV--SDSNVKPDQTFA-DVLAISQRTTHN 129 (503)
T ss_dssp HHHHHHHHHHHTT------TC-------------------------------
T ss_pred HHHHHHHhhhhhc------ccCccc--CCeEECCCCcHH-HHHHHHHHcCce
Confidence 5667777776653 55 998 899999999999 799999988875
No 79
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=86.42 E-value=0.14 Score=29.26 Aligned_cols=34 Identities=18% Similarity=0.243 Sum_probs=28.6
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSE 62 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g 62 (64)
....+|+++|.| .+.+++.+.++. ++++.+.+.+
T Consensus 83 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~ 116 (159)
T 1yav_A 83 LDQITVEEVMLT--DIPRLHINDPIM-KGFGMVINNG 116 (159)
T ss_dssp TTTSBHHHHSBC--SCCEEETTSBHH-HHHHHTTTCS
T ss_pred hccCCHHHhcCC--CCceEcCCCCHH-HHHHHHHhCC
Confidence 568899999998 678899999998 7888877654
No 80
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=86.33 E-value=0.1 Score=28.78 Aligned_cols=35 Identities=11% Similarity=0.301 Sum_probs=30.1
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
..+.+++++|.| .+.+++.+.++. ++++.+.++++
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~ 105 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQV 105 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTC
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 457899999987 778899999999 79999988775
No 81
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=86.29 E-value=0.4 Score=27.71 Aligned_cols=35 Identities=6% Similarity=-0.013 Sum_probs=30.0
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
....+|+++|.+ .+.+++.+.++. ++++.+.++++
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~ 139 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGL 139 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTC
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCC
Confidence 467899999986 578999999999 79999988775
No 82
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=86.21 E-value=0.73 Score=26.12 Aligned_cols=33 Identities=9% Similarity=0.249 Sum_probs=28.2
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+|+++| ..+.+++.+.++. ++++.+.+++.
T Consensus 84 ~~~~v~~~m---~~~~~v~~~~~l~-~~~~~m~~~~~ 116 (153)
T 3oco_A 84 DKAKISTIM---RDIVSVPENMKVP-DVMEEMSAHRV 116 (153)
T ss_dssp TTSBGGGTC---BCCEEEETTSBHH-HHHHHHHHTTC
T ss_pred CCCcHHHHh---CCCeEECCCCCHH-HHHHHHHHcCC
Confidence 488999999 3678999999999 79999988764
No 83
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=86.18 E-value=0.64 Score=26.08 Aligned_cols=32 Identities=16% Similarity=0.356 Sum_probs=27.4
Q ss_pred CeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 28 RKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 28 ~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
+.+++++| ....+++.+.++. ++++.+.+++.
T Consensus 87 ~~~v~~~m---~~~~~v~~~~~l~-~~~~~m~~~~~ 118 (148)
T 3lv9_A 87 KIELEEIL---RDIIYISENLTID-KALERIRKEKL 118 (148)
T ss_dssp CCCGGGTC---BCCEEEETTSBHH-HHHHHHHHHTC
T ss_pred CccHHHhc---CCCeEECCCCCHH-HHHHHHHhcCC
Confidence 78999999 3478999999999 79999988764
No 84
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=85.94 E-value=0.2 Score=30.74 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=29.2
Q ss_pred CeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 28 RKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 28 ~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
..+|+|+|++ ++.+++.+.++. ++++.+.+++++
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~ 39 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLK 39 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCS
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCC
Confidence 4689999975 578999999998 799999998864
No 85
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=85.87 E-value=0.47 Score=26.60 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=28.8
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSE 62 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g 62 (64)
....+|+++|.+ .+..++.+.++. ++++.+.+++
T Consensus 84 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~ 117 (150)
T 3lqn_A 84 LEEMKVEQVMKQ--DIPVLKLEDSFA-KALEMTIDHP 117 (150)
T ss_dssp GGGCBGGGTCBS--SCCEEETTCBHH-HHHHHHHHCS
T ss_pred HhcCCHHHHhcC--CCceeCCCCCHH-HHHHHHHhCC
Confidence 467899999994 578999999998 7999988765
No 86
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=85.62 E-value=0.3 Score=30.88 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=33.0
Q ss_pred cccCeeecceeeecc----cEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 25 ELRRKIVGDVMTKLE----DVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~----~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
...+.+|+++|+++. .+++++.+.++. ++++.+.+++.
T Consensus 252 ~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~ 293 (323)
T 3t4n_C 252 NDLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKARV 293 (323)
T ss_dssp HHTTSBHHHHGGGSCTTCCCCEEECTTCBHH-HHHHHHHHSCC
T ss_pred hhccCCHHHHHhhccccCCCCEEECCCCCHH-HHHHHHHHhCC
Confidence 445779999999987 899999999999 79999998875
No 87
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=85.15 E-value=0.77 Score=25.48 Aligned_cols=33 Identities=6% Similarity=0.046 Sum_probs=28.2
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+++++|.+ .+.+++.+ ++. ++++.+.+++.
T Consensus 69 ~~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~~ 101 (141)
T 2rih_A 69 LDGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHNI 101 (141)
T ss_dssp TTSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHTC
T ss_pred CCCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcCC
Confidence 36899999987 68899999 998 79999988765
No 88
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=85.11 E-value=0.18 Score=28.66 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=30.8
Q ss_pred cCeeecceeeec----ccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKL----EDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr----~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.++.++|.|+ .++.+++.+.++. ++++.+.++++
T Consensus 85 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~ 124 (152)
T 2uv4_A 85 LDVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEV 124 (152)
T ss_dssp TTSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTC
T ss_pred hcchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCC
Confidence 467899999876 6788999999999 79999888765
No 89
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=85.04 E-value=0.24 Score=28.46 Aligned_cols=33 Identities=6% Similarity=0.112 Sum_probs=28.4
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+++++|.| .++++.+.++. ++++.+.+++.
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~ 133 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRN 133 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCC
Confidence 56789999976 78999999998 79999988764
No 90
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=84.66 E-value=0.29 Score=26.93 Aligned_cols=33 Identities=9% Similarity=0.110 Sum_probs=27.8
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+++++|.| ..+++.+.++. ++++.+.+++.
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~ 99 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRY 99 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCC
Confidence 56789999976 47899999998 79999988765
No 91
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=83.69 E-value=0.16 Score=29.60 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=30.0
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
....+|+++|++ .+++++.+.++. ++++.+.++|+
T Consensus 102 ~~~~~v~~im~~--~~~tv~~~~~l~-~a~~~m~~~~~ 136 (170)
T 4esy_A 102 GRKLTASAVMTQ--PVVTAAPEDSVG-SIADQMRRHGI 136 (170)
T ss_dssp HTTCBHHHHCBC--CSCCBCTTSBHH-HHHHHHHHTTC
T ss_pred ccccchhhhccc--CcccCCcchhHH-HHHHHHHHcCC
Confidence 456789999986 678899999999 79999998875
No 92
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=82.12 E-value=0.15 Score=35.63 Aligned_cols=35 Identities=26% Similarity=0.175 Sum_probs=24.3
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSE 62 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g 62 (64)
.+..++++|+|+.++++++.+.++. ++++.+.+++
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~ 181 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKAR 181 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcC
Confidence 5678999999999999999999998 6887776654
No 93
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=82.00 E-value=0.073 Score=37.29 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=26.1
Q ss_pred ecceeee----cccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 31 VGDVMTK----LEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 31 v~dvM~P----r~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
|++||++ +.+.++++.+.++. ++++.+.+++||
T Consensus 109 V~~V~~~~~~m~~d~v~l~~~~tv~-ea~~~m~~~~~s 145 (511)
T 3usb_A 109 VDKVKRSESGVISDPFFLTPEHQVY-DAEHLMGKYRIS 145 (511)
T ss_dssp HHHHHTSSSCSSSSCCCBCTTSBHH-HHHHHHHHHCCS
T ss_pred HHHhhccccccccCCEEECCCCCHH-HHHHHHHHcCCc
Confidence 4444444 44789999999999 799999999986
No 94
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=80.74 E-value=0.32 Score=33.40 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=0.0
Q ss_pred CeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 28 RKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 28 ~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
+.+|+++|+|+.++.+++.+.++. ++++.+.+++.
T Consensus 154 ~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~ 188 (494)
T 1vrd_A 154 SKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRI 188 (494)
T ss_dssp ------------------------------------
T ss_pred CCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCC
Confidence 467999999988999999999999 79988887663
No 95
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=79.81 E-value=0.59 Score=32.48 Aligned_cols=43 Identities=7% Similarity=-0.004 Sum_probs=10.6
Q ss_pred HHHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 14 KDEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 14 ~~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+++.+++.++ ++++++|+ .+.++++.+.++. ++++.+.+++||
T Consensus 78 e~~a~~v~~v-----k~~~~~m~--~~~v~v~~~~tv~-ea~~~m~~~~~s 120 (490)
T 4avf_A 78 EQQAAEVRKV-----KKHETAIV--RDPVTVTPSTKII-ELLQMAREYGFS 120 (490)
T ss_dssp HHHHHHHHHH-----HHCCC-------------------------------
T ss_pred HHHHHHhhhh-----cccccCcc--cCceEeCCCCcHH-HHHHHHHHhCCC
Confidence 5667777777 45788898 4688999999999 799999988875
No 96
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=79.69 E-value=0.38 Score=29.46 Aligned_cols=32 Identities=6% Similarity=0.091 Sum_probs=25.9
Q ss_pred eecc-eeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 30 IVGD-VMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 30 ~v~d-vM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+|.+ +|+| ++++++.+.++. ++++.+.++|++
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~ 36 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYR 36 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCC
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCc
Confidence 3444 5555 899999999999 799999998875
No 97
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=79.66 E-value=0.41 Score=29.46 Aligned_cols=36 Identities=25% Similarity=0.341 Sum_probs=29.7
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.....+|+++|++ .+++++.+.++. ++++.+.+.++
T Consensus 217 ~~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~ 252 (282)
T 2yzq_A 217 QLPNKPVAEIMTR--DVIVATPHMTVH-EVALKMAKYSI 252 (282)
T ss_dssp --CCCBGGGTCBS--SCCCBCTTSBHH-HHHHHHHHHTC
T ss_pred hhccCCHHHhcCC--CCceeCCCCCHH-HHHHHHHHcCc
Confidence 3457899999986 778999999999 79999988775
No 98
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=78.85 E-value=0.46 Score=33.25 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=30.6
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+|+++|+| .++++++.+.++. ++++.+.+++.
T Consensus 173 ~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i 207 (511)
T 3usb_A 173 YSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKI 207 (511)
T ss_dssp SSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTC
T ss_pred CCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCC
Confidence 46789999998 8899999999998 79999988764
No 99
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=73.85 E-value=0.65 Score=32.13 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=22.9
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+++++|+|+.++.+++.+.++. ++++.+.+++.
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~ 206 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKK 206 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCC
Confidence 4578999999988999999999999 79998888764
No 100
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=73.57 E-value=1.1 Score=27.27 Aligned_cols=35 Identities=14% Similarity=0.157 Sum_probs=29.2
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
..+.+|+++|++ ++++++.+.++. ++++.+.++++
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~ 147 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSRE 147 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSC
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCC
Confidence 356789999985 578899999998 79999988765
No 101
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=69.63 E-value=3.3 Score=20.03 Aligned_cols=23 Identities=4% Similarity=0.148 Sum_probs=19.4
Q ss_pred EEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 41 VYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 41 v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+++++.+.++. ++++.+.+++++
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~ 24 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAG 24 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCS
T ss_pred CeEECCCCcHH-HHHHHHHHcCCC
Confidence 57889999998 799999888764
No 102
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=68.41 E-value=2.3 Score=29.16 Aligned_cols=42 Identities=10% Similarity=0.103 Sum_probs=6.6
Q ss_pred HHHHHHHhhhcccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 15 DEVNIISGALELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 15 ~e~~ml~~~l~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
+..+.+..++. ++++|+| ++++++.+.++. ++++.+.+++++
T Consensus 86 ~~~~~v~~v~~-----~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~ 127 (494)
T 1vrd_A 86 EQARQVSIVKK-----TENGIIY--DPITVTPDMTVK-EAIDLMAEYKIG 127 (494)
T ss_dssp HHHHHHHHHHT-----C---------------------------------
T ss_pred HHHHHHHhhhh-----HhhcCcc--CCeEECCCCCHH-HHHHHHHHcCce
Confidence 34556666654 5778986 789999999999 799988887654
No 103
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=67.47 E-value=1.3 Score=27.81 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=29.5
Q ss_pred ccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 26 LRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 26 ~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
..+.+|+++|.+ .+.+++.+.++. ++++.+.++++
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~ 230 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDF 230 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTC
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCC
Confidence 357889999975 578999999999 79999988775
No 104
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=64.64 E-value=4.6 Score=20.50 Aligned_cols=24 Identities=4% Similarity=0.149 Sum_probs=20.4
Q ss_pred cEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 40 DVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 40 ~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
++++++.+.++. ++++.+.+++++
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~ 24 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAG 24 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCS
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCC
Confidence 468899999999 799999988764
No 105
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=62.59 E-value=1.6 Score=27.59 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=31.1
Q ss_pred ccCeeecceeeec----ccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 26 LRRKIVGDVMTKL----EDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 26 ~~~~~v~dvM~Pr----~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
..+.++.++|.++ ..+.+++.+.++. ++++.+.++++
T Consensus 248 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~ 288 (334)
T 2qrd_G 248 NLDLSVGEALLKRPANFDGVHTCRATDRLD-GIFDAIKHSRV 288 (334)
T ss_dssp GGGSBHHHHHTTCCTTCCCCCEECTTCBHH-HHHHHHHHSCC
T ss_pred cccCcHHHHHhcccccCCCCEEECCCCcHH-HHHHHHHHcCC
Confidence 3467899999975 5788999999999 79999988775
No 106
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=59.59 E-value=2.3 Score=29.22 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=29.4
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+++++|++ ++.+++.+.++. ++++.+.+++.
T Consensus 217 ~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~ 250 (473)
T 2zy9_A 217 PRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDF 250 (473)
T ss_dssp TTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTC
T ss_pred CCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCC
Confidence 57899999985 688999999999 79999988764
No 107
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=59.56 E-value=1.9 Score=31.01 Aligned_cols=32 Identities=22% Similarity=0.187 Sum_probs=0.0
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhc
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKS 61 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~ 61 (64)
.+..|+++||| ++++++.+.+++ ++.+.+.++
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~ 229 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRET 229 (556)
T ss_dssp -----------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHc
Confidence 35789999997 599999999998 677766654
No 108
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=53.46 E-value=4.7 Score=27.49 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=29.0
Q ss_pred cCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 27 RRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 27 ~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
.+.+++++|++ ..+++++.+.++. ++++.+.+++.
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~ 184 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRI 184 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTC
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCC
Confidence 46789999986 3678899999998 79999988764
No 109
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=52.75 E-value=6.6 Score=27.11 Aligned_cols=35 Identities=14% Similarity=0.090 Sum_probs=27.8
Q ss_pred cccCeeecceeeecccEEEEeCCCCCCHHHHHHHHhcC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSE 62 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g 62 (64)
...+.+|+++|++ ++..++.+.++. ++++.+.+++
T Consensus 447 ~~~~~~V~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 481 (527)
T 3pc3_A 447 RQQSDPAIKALNK--RVIRLNESEILG-KLARVLEVDP 481 (527)
T ss_dssp CCTTSBGGGGEET--TCCEEETTSBHH-HHHHHHTTCS
T ss_pred CcCCCcHHHHhcC--CCeEECCCCcHH-HHHHHHhhCC
Confidence 3457789999985 678899999998 7888876543
No 110
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=49.24 E-value=3.6 Score=28.29 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=0.0
Q ss_pred CeeecceeeecccEEEEeCCCCCCHHHHHHHHhcC
Q psy4850 28 RKIVGDVMTKLEDVYMLSYDAILDFETVSEIMKSE 62 (64)
Q Consensus 28 ~~~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g 62 (64)
+.+++++|+| +..+++.+.++. ++++.+.+++
T Consensus 149 ~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~ 180 (486)
T 2cu0_A 149 GKLVKELMTK--EVITVPESIEVE-EALKIMIENR 180 (486)
T ss_dssp -----------------------------------
T ss_pred CCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcC
Confidence 4679999986 688999999998 6888887765
No 111
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=38.34 E-value=16 Score=25.96 Aligned_cols=31 Identities=0% Similarity=-0.204 Sum_probs=24.8
Q ss_pred eecceeeecccEEEEeCCCCCCHHHHHHHHhcCC
Q psy4850 30 IVGDVMTKLEDVYMLSYDAILDFETVSEIMKSES 63 (64)
Q Consensus 30 ~v~dvM~Pr~~v~~l~~~~~~~~e~l~~i~~~g~ 63 (64)
+|+++|++. ..+++.++++. ++++.+.+++.
T Consensus 569 ~v~~iMt~~--pitV~~~~~l~-ea~~~M~~~~i 599 (632)
T 3org_A 569 SLVVPCDVS--PIVVTSYSLVR-QLHFLFVMLMP 599 (632)
T ss_dssp --CCSCCCC--CCEEETTCBHH-HHHHHHHHTCC
T ss_pred ccchhhcCC--CceecCCCcHH-HHHHHHHhcCC
Confidence 489999865 56899999999 79999998764
No 112
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=33.23 E-value=19 Score=20.74 Aligned_cols=23 Identities=26% Similarity=0.390 Sum_probs=17.0
Q ss_pred cccCeeecceeeecccEEEEeCCCC
Q psy4850 25 ELRRKIVGDVMTKLEDVYMLSYDAI 49 (64)
Q Consensus 25 ~~~~~~v~dvM~Pr~~v~~l~~~~~ 49 (64)
+|.+-+ +++.+|.+|++++...|
T Consensus 96 ~feDgs--~~~~kR~~iyt~~E~lP 118 (118)
T 2qqr_A 96 EFEDGS--QLVVKRDDVYTLDEELP 118 (118)
T ss_dssp EETTSC--EEEECGGGEEETTSCCC
T ss_pred EECCCC--EEEEcHHHeeccccCCc
Confidence 344444 68999999999987654
No 113
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=26.48 E-value=38 Score=20.10 Aligned_cols=16 Identities=13% Similarity=0.299 Sum_probs=13.5
Q ss_pred CCCCHHHHHHHHhhhc
Q psy4850 10 NDLEKDEVNIISGALE 25 (64)
Q Consensus 10 g~l~~~e~~ml~~~l~ 25 (64)
+.|+++|+++|.+||.
T Consensus 15 s~LteeEr~~Il~VL~ 30 (153)
T 2zet_C 15 STLTDEEAEHVWAVVQ 30 (153)
T ss_dssp TTSCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHH
Confidence 4589999999988874
No 114
>1xw3_A Sulfiredoxin; retroreduction, sulfinic acid, peroxiredoxin, ATP, oxidoreductase; 1.65A {Homo sapiens} SCOP: d.268.1.4 PDB: 1xw4_X* 3cyi_A* 2rii_X 3hy2_X*
Probab=24.04 E-value=1e+02 Score=17.25 Aligned_cols=31 Identities=16% Similarity=0.198 Sum_probs=20.5
Q ss_pred eeecce-eeecccEEEEeCCCCCCHHHHHHHHh
Q psy4850 29 KIVGDV-MTKLEDVYMLSYDAILDFETVSEIMK 60 (64)
Q Consensus 29 ~~v~dv-M~Pr~~v~~l~~~~~~~~e~l~~i~~ 60 (64)
....+| ++|.++|. .+.-..++++.++.+.+
T Consensus 9 ~~~~~v~~IPi~~I~-~p~~~~~d~~kv~eL~~ 40 (110)
T 1xw3_A 9 GRIAAVHNVPLSVLI-RPLPSVLDPAKVQSLVD 40 (110)
T ss_dssp CCCEEEEEEEGGGEE-CCSCCCCCHHHHHHHHH
T ss_pred CCCceEEEeCHHHcc-CCCCCccCHHHHHHHHH
Confidence 334555 89999999 56666777666665544
No 115
>3bc1_B Synaptotagmin-like protein 2; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Homo sapiens}
Probab=21.46 E-value=32 Score=17.51 Aligned_cols=16 Identities=25% Similarity=0.233 Sum_probs=11.2
Q ss_pred CCCCHHHHHHHHhhhc
Q psy4850 10 NDLEKDEVNIISGALE 25 (64)
Q Consensus 10 g~l~~~e~~ml~~~l~ 25 (64)
|.+++.|+++|..+|.
T Consensus 1 ~~l~e~E~~~IL~VL~ 16 (59)
T 3bc1_B 1 GSPEFEEQEAIMKVLQ 16 (59)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHh
Confidence 3466778888877764
No 116
>3tuo_A DNA-binding protein SATB1; 1.70A {Homo sapiens}
Probab=21.15 E-value=75 Score=18.00 Aligned_cols=24 Identities=4% Similarity=0.248 Sum_probs=19.6
Q ss_pred cEEEEeCCCCCCHHHHHH-HHhcCCC
Q psy4850 40 DVYMLSYDAILDFETVSE-IMKSESK 64 (64)
Q Consensus 40 ~v~~l~~~~~~~~e~l~~-i~~~g~S 64 (64)
+-+-++.+..+. ++++. +.+-|||
T Consensus 31 syviI~~~t~f~-qLV~taL~~LGYs 55 (105)
T 3tuo_A 31 EFVLVRKDMLFN-QLIEMALLSLGYS 55 (105)
T ss_dssp EEEEEETTSBGG-GHHHHHHHHTTCC
T ss_pred eEEEEeccchHH-HHHHHHHHHcCCC
Confidence 556788999999 68888 6778987
No 117
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=21.04 E-value=63 Score=14.90 Aligned_cols=19 Identities=0% Similarity=-0.060 Sum_probs=14.3
Q ss_pred eCCCCCCHHHHHHHHhcCCC
Q psy4850 45 SYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 45 ~~~~~~~~e~l~~i~~~g~S 64 (64)
+...+.+ ++.+.+.+.||.
T Consensus 47 ~~~~~~~-~i~~~i~~~Gy~ 65 (69)
T 4a4j_A 47 HGETTPQ-ILTDAVERAGYH 65 (69)
T ss_dssp CTTCCHH-HHHHHHHHTTCE
T ss_pred CCCCCHH-HHHHHHHHcCCc
Confidence 4556666 688889999984
No 118
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=20.67 E-value=21 Score=16.75 Aligned_cols=24 Identities=17% Similarity=0.022 Sum_probs=18.5
Q ss_pred CCHHHHHHHHhhhcccCeeeccee
Q psy4850 12 LEKDEVNIISGALELRRKIVGDVM 35 (64)
Q Consensus 12 l~~~e~~ml~~~l~~~~~~v~dvM 35 (64)
++++|.+.|....+...+++++.+
T Consensus 22 lt~eE~~~l~~~A~~~g~s~Seyi 45 (51)
T 2ba3_A 22 FSPVEDETIRKKAEDSGLTVSAYI 45 (51)
T ss_dssp ECHHHHHHHHHHHHHHTCCHHHHH
T ss_pred ECHHHHHHHHHHHHHhCCCHHHHH
Confidence 678999999888887777766543
No 119
>3mhy_A PII-like protein PZ; PII protein, alpha-beta protein, homotrimer, signaling prote; HET: PG6 ATP AKG MES; 1.40A {Azospirillum brasilense} SCOP: d.58.5.1 PDB: 3o5t_B*
Probab=20.17 E-value=59 Score=17.90 Aligned_cols=29 Identities=17% Similarity=0.154 Sum_probs=23.7
Q ss_pred eeecccEEEEeCCCCCCHHHHHHHHhcCCC
Q psy4850 35 MTKLEDVYMLSYDAILDFETVSEIMKSESK 64 (64)
Q Consensus 35 M~Pr~~v~~l~~~~~~~~e~l~~i~~~g~S 64 (64)
..|...+..+=.+...+ ++++.|.+..++
T Consensus 55 ~~pK~kieivV~d~~v~-~vv~~I~~~~~t 83 (112)
T 3mhy_A 55 FLPKVKVEVAVSDDQYE-QVVEAIQKAANT 83 (112)
T ss_dssp CEEEEEEEEEECTTTHH-HHHHHHHHHHCC
T ss_pred ccceEEEEEEEchHHHH-HHHHHHHHHhcC
Confidence 36889999998899888 799998876553
Done!