BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4854
(555 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328700383|ref|XP_003241237.1| PREDICTED: aminomethyltransferase, mitochondrial-like
[Acyrthosiphon pisum]
Length = 406
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 173/238 (72%), Gaps = 5/238 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L++ H+ HGGKMVPFAG+ MPV+Y A SI +SHLHTR + S+FDVSHMLQT + GK
Sbjct: 27 RKTKLHEFHIRHGGKMVPFAGYMMPVKY-ADSIASSHLHTRRQCSLFDVSHMLQTKIHGK 85
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKTLEDSLFLVSNASRRKV 315
HRE+++E ICV DV L GK LSLF +++ GGI DDLI+TKT D L++V+NA ++
Sbjct: 86 HREQFMEQICVTDVQNLGTGKSALSLFIDDRTGGILDDLIITKTDGDFLYMVTNAGCKEQ 145
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD--LDLSSLYFMT 373
DM ++ FKS G D L+FL ++E+ L+A+QGP S+ +LQ D DLS+LYFM
Sbjct: 146 DMRMLTEQLSIFKSSGHDASLEFLDSDEQSLLALQGPRSAAVLQSFVDGSTDLSALYFMD 205
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S T+ G+P C +TR GYTGEDG EISVP ++ I E+ ++ +DVKLAGLGARD+L
Sbjct: 206 STTATVCGVPDCRVTRCGYTGEDGFEISVPSDRVEAIAESFVAQDDVKLAGLGARDTL 263
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNAND-QRVGAITSG 69
++RR+ +PGA++I Q+ G RKR G + G P+R G +FN D ++G++TSG
Sbjct: 293 RKRRDECRYPGATVILKQLGDGAQRKRVGLVQKAHGAPVRGGAVLFNVVDGAKIGSVTSG 352
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
CPSP+L +NIAMGY++ +SK G E+ VR +++ + VTKMPFVK NYY+ PK
Sbjct: 353 CPSPTLSQNIAMGYVDSTFSKNGTEIQAEVRGQKIPMVVTKMPFVKPNYYSKPK 406
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD--LDLSSLYFMTSRPCTIAGIP- 508
FKS G D L+FL +E+ L+A+QGP S+ +LQ D DLS+LYFM S T+ G+P
Sbjct: 157 FKSSGHDASLEFLDSDEQSLLALQGPRSAAVLQSFVDGSTDLSALYFMDSTTATVCGVPD 216
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
C +TR GYTGEDG EISVP ++ I E+ ++ +DVKLAGLGARD+L
Sbjct: 217 CRVTRCGYTGEDGFEISVPSDRVEAIAESFVAQDDVKLAGLGARDTL 263
>gi|357604471|gb|EHJ64204.1| aminomethyltransferase [Danaus plexippus]
Length = 410
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/261 (50%), Positives = 172/261 (65%), Gaps = 3/261 (1%)
Query: 171 KYFLKFLSFFSGL-TFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSI 229
KY L FS + FS G S ++TPLY+LH +GGK+V FAGF +PVQY +S+
Sbjct: 12 KYLLVNRLGFSNIHARCFSDGDSKP--KQTPLYNLHQKYGGKVVDFAGFLLPVQYSDLSV 69
Query: 230 TASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGG 289
+ASHL TR S+FDVSHMLQT V GK W ESIC D+ + G +L++F N+ GG
Sbjct: 70 SASHLFTRKSASIFDVSHMLQTNVYGKDCVSWFESICPVDLKGMAHGTSSLTVFLNKDGG 129
Query: 290 IQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAV 349
I DDLI+TK ED L++VSNA R +VD M+ + ++ GKD+ + +R LIAV
Sbjct: 130 IIDDLIITKVKEDQLYIVSNAGRLEVDTQHMLETSELYRKKGKDVKVSMWDVTQRALIAV 189
Query: 350 QGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHI 409
QGP ++ +Q T+L L L FMTSR +AG+ C +TR GYTGEDGVEIS+P ++ +
Sbjct: 190 QGPKAAAAVQAITNLQLEELTFMTSRIGLVAGVECRVTRCGYTGEDGVEISIPEDKAVQV 249
Query: 410 VEALLSDEDVKLAGLGARDSL 430
EALL +DVKLAGLGARDSL
Sbjct: 250 TEALLQCKDVKLAGLGARDSL 270
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 75/108 (69%)
Query: 448 SNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI 507
+++ ++ GKD+ + +R LIAVQGP ++ +Q T+L L L FMTSR +AG+
Sbjct: 163 TSELYRKKGKDVKVSMWDVTQRALIAVQGPKAAAAVQAITNLQLEELTFMTSRIGLVAGV 222
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
C +TR GYTGEDGVEIS+P ++ + EALL +DVKLAGLGARDSL
Sbjct: 223 ECRVTRCGYTGEDGVEISIPEDKAVQVTEALLQCKDVKLAGLGARDSL 270
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTST-GVPIRPGYEIFNANDQRVGAITSGCP 71
K RR++ FPGA II QIK GVS++R G G P R + +A +G +TSGCP
Sbjct: 300 KNRRQSAAFPGADIILRQIKDGVSKRRVGLRMVEGAPARKDALLKDATGNVIGKVTSGCP 359
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSL N+AMGY++ + KVG EL V +R K V KV KMPFV S YY
Sbjct: 360 SPSLGGNVAMGYVKEEFKKVGNELLVNIRGKDVACKVAKMPFVPSKYY 407
>gi|289739909|gb|ADD18702.1| mitochondrial aminomethyltransferase precursor [Glossina morsitans
morsitans]
Length = 420
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/270 (48%), Positives = 176/270 (65%), Gaps = 12/270 (4%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
+P S+ + T LYD H+ HGGK+V F G+++PVQY I ASHLHTR+ S+FDVSH
Sbjct: 32 APASAADKVEHTALYDFHVQHGGKIVNFGGYALPVQYADQGIAASHLHTRAHASIFDVSH 91
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
MLQT V GK E +ESIC AD+H G+L++FTN G I DDLIVT+ + L++V
Sbjct: 92 MLQTYVHGKDAIECIESICTADIHNTSNANGSLTVFTNSAGCILDDLIVTRVNDKQLYVV 151
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLS 367
SNA+ ++ DM LM AA + K+ GKD+ ++FLS +++ LIA+QGP S L T +L
Sbjct: 152 SNAAMKQQDMALMEAAVAKRKAEGKDVSIEFLSPKDQSLIALQGPSSVKALANLTKANLQ 211
Query: 368 SLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGL 424
LYFMT+ +AG+ C +TR GYTGEDGVEISVP + H+ E+LL ++ +VK+AGL
Sbjct: 212 QLYFMTTIISEVAGVNDCRITRCGYTGEDGVEISVPSSKIKHVTESLLQQTNGNVKMAGL 271
Query: 425 GARDSL---------SGDITLNTPVPHGSL 445
GARDSL DI NT G+L
Sbjct: 272 GARDSLRLEAGLCLYGNDIDSNTTPIEGAL 301
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV----PIRPGYEIFNA 58
I L KRRR FPGA II +Q+KSGV ++R G + P R G I++
Sbjct: 297 IEGALAWLVAKRRRAELNFPGAEIIVNQLKSGVQKRRIGLKLSTAGKPPPARSGAHIYH- 355
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
N+ VG +TSGCPSPSL NIAMGYI+ + G ++ V++RD+ D +V KMPF K+NY
Sbjct: 356 NNVEVGYVTSGCPSPSLGFNIAMGYIKEELKQAGTKVQVKIRDRFYDAEVAKMPFTKTNY 415
Query: 119 YTPPK 123
+ PK
Sbjct: 416 FMKPK 420
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTL 511
K+ GKD+ ++FLSP+++ LIA+QGP S L T +L LYFMT+ +AG+ C +
Sbjct: 172 KAEGKDVSIEFLSPKDQSLIALQGPSSVKALANLTKANLQQLYFMTTIISEVAGVNDCRI 231
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDGVEISVP + H+ E+LL ++ +VK+AGLGARDSL
Sbjct: 232 TRCGYTGEDGVEISVPSSKIKHVTESLLQQTNGNVKMAGLGARDSL 277
>gi|395516319|ref|XP_003762338.1| PREDICTED: aminomethyltransferase, mitochondrial [Sarcophilus
harrisii]
Length = 411
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/245 (55%), Positives = 170/245 (69%), Gaps = 7/245 (2%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
S G P ++TPL+D H SHGGKMVPFAG+S+PVQY S SHLHTR S+FDVS
Sbjct: 34 LSSGQEPL--KKTPLFDFHQSHGGKMVPFAGWSLPVQYRD-SHLESHLHTRRHCSLFDVS 90
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
HMLQT + GK R + +ES+ V+D+ EL P +GTL+LFTNE+GGI DDLIVT T +D L++
Sbjct: 91 HMLQTKIFGKDRVKLMESLVVSDIAELKPNQGTLTLFTNEEGGIIDDLIVTNTSDDYLYV 150
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
VSNA R+ DM LM KS G D++L+ ++ LIA+QGP ++ +LQ DL
Sbjct: 151 VSNAGCREKDMALMQNKVSELKSAGCDVNLEVIN---NALIALQGPSAAQVLQAGVADDL 207
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
L FMTS + GIP C +TR GYTGEDGVEISVP E+ H+ E LL +++VKLAGL
Sbjct: 208 RKLTFMTSAMMDVFGIPGCRVTRCGYTGEDGVEISVPAEKAIHLAEVLLENKEVKLAGLA 267
Query: 426 ARDSL 430
ARDSL
Sbjct: 268 ARDSL 272
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 74/109 (67%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA+I+ Q+K ++RKR G TSTG PIR I N +G ITSGCP
Sbjct: 301 GKRRRAAMDFPGAAIVIPQMKGRLARKRVGLTSTGAPIRQHSLIMNTEGAVIGEITSGCP 360
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY++ YSK+G L V VR K+ + V+KMPFV + YYT
Sbjct: 361 SPCLKKNVAMGYVDGGYSKIGTPLLVEVRKKQQEAVVSKMPFVPTRYYT 409
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
KS G D++L+ ++ LIA+QGP ++ +LQ DL L FMTS + GIP C
Sbjct: 171 LKSAGCDVNLEVIN---NALIALQGPSAAQVLQAGVADDLRKLTFMTSAMMDVFGIPGCR 227
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP E+ H+ E LL +++VKLAGL ARDSL
Sbjct: 228 VTRCGYTGEDGVEISVPAEKAIHLAEVLLENKEVKLAGLAARDSL 272
>gi|157125617|ref|XP_001660716.1| aminomethyltransferase [Aedes aegypti]
gi|108873536|gb|EAT37761.1| AAEL010276-PA [Aedes aegypti]
Length = 412
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/249 (52%), Positives = 172/249 (69%), Gaps = 6/249 (2%)
Query: 185 FVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFD 244
+ + G PS +T LY+ H + GGK+V FAG+ +PVQY SI SH +TR S+FD
Sbjct: 25 YASTGGKEPS---KTALYEFHQAQGGKLVDFAGYWLPVQYSDQSIIKSHHYTREYGSIFD 81
Query: 245 VSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSL 304
VSHMLQT + GK ESIC AD+ L G GTL++FTN +GGI DDLIV++ ED+L
Sbjct: 82 VSHMLQTYLRGKDVISCFESICTADIKGLRNGTGTLTVFTNGKGGILDDLIVSRVSEDTL 141
Query: 305 FLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL 364
++VSNASR+ DM +M A FKS GKD+ +QFLS++++ L+A+QGP + ++LQ+
Sbjct: 142 YVVSNASRKDTDMAVMTDAVASFKSQGKDVSVQFLSSDDQSLLAIQGPHAVSVLQKLCTK 201
Query: 365 DLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKL 421
DLS LYFM + TIAG+ C +TR GYTGEDGVEIS+P + T I ALL + ++KL
Sbjct: 202 DLSRLYFMNTTTDTIAGVENCRITRCGYTGEDGVEISIPSNKATDIASALLEQKVGNLKL 261
Query: 422 AGLGARDSL 430
AGLGARDSL
Sbjct: 262 AGLGARDSL 270
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 7 LLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVG 64
LL K+RR FPG+ I +QIK+GV+R+R GF ++ P R EIF+ ++G
Sbjct: 294 LLWLVAKQRRAENNFPGSDKINNQIKNGVTRRRVGFKMSAGSAPARQHVEIFDNEHHKIG 353
Query: 65 AITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
ITSGCPSP L++NIAMGYI KVG E+ +++RDK +V KMPFV ++YY PK
Sbjct: 354 EITSGCPSPCLQQNIAMGYIREESKKVGTEVTLKIRDKFYHSQVAKMPFVATHYYQQPK 412
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 78/107 (72%), Gaps = 3/107 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FKS GKD+ +QFLS +++ L+A+QGP + ++LQ+ DLS LYFM + TIAG+ C
Sbjct: 164 FKSQGKDVSVQFLSSDDQSLLAIQGPHAVSVLQKLCTKDLSRLYFMNTTTDTIAGVENCR 223
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEIS+P + T I ALL + ++KLAGLGARDSL
Sbjct: 224 ITRCGYTGEDGVEISIPSNKATDIASALLEQKVGNLKLAGLGARDSL 270
>gi|270008909|gb|EFA05357.1| hypothetical protein TcasGA2_TC015522 [Tribolium castaneum]
Length = 403
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 165/243 (67%), Gaps = 3/243 (1%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + + T LYD H+ +GGKMV F GF +PVQY + I ASHLHTR S+FDVSHMLQ
Sbjct: 20 ASDAKAEVTALYDFHVENGGKMVNFGGFMLPVQYSGLGIAASHLHTRKNASLFDVSHMLQ 79
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T ++G ++ESIC AD+ L P TL++FTN++GG+ DDLI+TK +D L++VSNA
Sbjct: 80 TEISGADCLSYMESICTADLKTLPPNTSTLTVFTNDKGGVLDDLIITKISDDHLYVVSNA 139
Query: 311 SRRKVDMDLMVAAQDRFKSL--GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
+ +K D ++ A D K +I ++F ERGL+A+QGP ++ +LQ+ TD+DLS
Sbjct: 140 AMKKQDQQHLLTALDSHKKTNPNSNIKMKFFEPSERGLVALQGPKAAEVLQKLTDVDLSK 199
Query: 369 LYFMTSRPCTIAGI-PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
LYFMTS T+ G C +TR GYTGEDG EIS+P + I ++ +E VKLAGLGAR
Sbjct: 200 LYFMTSTEATVCGCGACRVTRCGYTGEDGFEISMPAIKQVDITREIMKNEAVKLAGLGAR 259
Query: 428 DSL 430
DSL
Sbjct: 260 DSL 262
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQ 61
I + L KRRRE+ FPGA I SQIK+G SRKR G + +G P R G I +AN
Sbjct: 282 IEAALTWLVAKRRRESRDFPGAETIVSQIKNGTSRKRVGLIADSGPPARHGTPIVDANGN 341
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+G++TSGCPSPSL KNIAM Y+ SK G + +++RDK VTKMPFV SNYY
Sbjct: 342 EIGSVTSGCPSPSLGKNIAMAYVPADLSKNGTKHNLKIRDKIYSAVVTKMPFVPSNYYNK 401
Query: 122 PK 123
PK
Sbjct: 402 PK 403
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI-PCTLTRAGY 516
+I ++F P ERGL+A+QGP ++ +LQ+ TD+DLS LYFMTS T+ G C +TR GY
Sbjct: 164 NIKMKFFEPSERGLVALQGPKAAEVLQKLTDVDLSKLYFMTSTEATVCGCGACRVTRCGY 223
Query: 517 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TGEDG EIS+P + I ++ +E VKLAGLGARDSL
Sbjct: 224 TGEDGFEISMPAIKQVDITREIMKNEAVKLAGLGARDSL 262
>gi|118795262|ref|XP_322034.3| AGAP001124-PA [Anopheles gambiae str. PEST]
gi|116116686|gb|EAA01036.3| AGAP001124-PA [Anopheles gambiae str. PEST]
Length = 415
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 163/243 (67%), Gaps = 3/243 (1%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS RT LY+ H H GK+V FAG+ +PVQY SI SHL+TR S+FDVSHMLQ
Sbjct: 31 SSDKTPSRTALYEFHQKHSGKLVDFAGYWLPVQYNDQSIIKSHLYTREYGSIFDVSHMLQ 90
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T + GK ESIC AD+ L G GTL++FTN GGI DDLIV + +D L++VSNA
Sbjct: 91 TYLKGKDVISCFESICTADIKGLRNGTGTLTVFTNSSGGILDDLIVNRVADDVLYVVSNA 150
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
SR+ VDM + A FK+ GKD+ +QFLS++++ L+AVQGP + LQ+ DLS L+
Sbjct: 151 SRKDVDMANISNAVSSFKTNGKDVSVQFLSSDDQSLLAVQGPNAVKTLQKLCSKDLSKLF 210
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGAR 427
FM + TIAG+ C +TR GYTGEDGVEIS+P Q HI ALL ++K+AGLGAR
Sbjct: 211 FMNTTTDTIAGVEGCRITRCGYTGEDGVEISIPSAQAEHIATALLDQTIGNLKMAGLGAR 270
Query: 428 DSL 430
DSL
Sbjct: 271 DSL 273
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNAND 60
+ + LL K RR FPG+ I SQIK+GV+R+R GF S P R EI+N
Sbjct: 293 VEANLLWLVAKPRRVENNFPGSDKINSQIKNGVTRRRVGFKMDSGAPPARQHVEIYNNEQ 352
Query: 61 QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
Q+VG ITSGCPSP L++NIAMGYI Y K+G E+ ++VRDK V KMPFV ++YY
Sbjct: 353 QKVGEITSGCPSPCLQQNIAMGYIREEYKKLGTEITLKVRDKHYHSAVAKMPFVATHYYQ 412
Query: 121 PPK 123
PK
Sbjct: 413 APK 415
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FK+ GKD+ +QFLS +++ L+AVQGP + LQ+ DLS L+FM + TIAG+ C
Sbjct: 167 FKTNGKDVSVQFLSSDDQSLLAVQGPNAVKTLQKLCSKDLSKLFFMNTTTDTIAGVEGCR 226
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEIS+P Q HI ALL ++K+AGLGARDSL
Sbjct: 227 ITRCGYTGEDGVEISIPSAQAEHIATALLDQTIGNLKMAGLGARDSL 273
>gi|189238264|ref|XP_974499.2| PREDICTED: similar to chloride channel protein 2 [Tribolium
castaneum]
Length = 1612
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 165/243 (67%), Gaps = 3/243 (1%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + + T LYD H+ +GGKMV F GF +PVQY + I ASHLHTR S+FDVSHMLQ
Sbjct: 1229 ASDAKAEVTALYDFHVENGGKMVNFGGFMLPVQYSGLGIAASHLHTRKNASLFDVSHMLQ 1288
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T ++G ++ESIC AD+ L P TL++FTN++GG+ DDLI+TK +D L++VSNA
Sbjct: 1289 TEISGADCLSYMESICTADLKTLPPNTSTLTVFTNDKGGVLDDLIITKISDDHLYVVSNA 1348
Query: 311 SRRKVDMDLMVAAQDRFKSL--GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
+ +K D ++ A D K +I ++F ERGL+A+QGP ++ +LQ+ TD+DLS
Sbjct: 1349 AMKKQDQQHLLTALDSHKKTNPNSNIKMKFFEPSERGLVALQGPKAAEVLQKLTDVDLSK 1408
Query: 369 LYFMTSRPCTIAGI-PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
LYFMTS T+ G C +TR GYTGEDG EIS+P + I ++ +E VKLAGLGAR
Sbjct: 1409 LYFMTSTEATVCGCGACRVTRCGYTGEDGFEISMPAIKQVDITREIMKNEAVKLAGLGAR 1468
Query: 428 DSL 430
DSL
Sbjct: 1469 DSL 1471
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQ 61
I + L KRRRE+ FPGA I SQIK+G SRKR G + +G P R G I +AN
Sbjct: 1491 IEAALTWLVAKRRRESRDFPGAETIVSQIKNGTSRKRVGLIADSGPPARHGTPIVDANGN 1550
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+G++TSGCPSPSL KNIAM Y+ SK G + +++RDK VTKMPFV SNYY
Sbjct: 1551 EIGSVTSGCPSPSLGKNIAMAYVPADLSKNGTKHNLKIRDKIYSAVVTKMPFVPSNYYNK 1610
Query: 122 PK 123
PK
Sbjct: 1611 PK 1612
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI-PCTLTRAGY 516
+I ++F P ERGL+A+QGP ++ +LQ+ TD+DLS LYFMTS T+ G C +TR GY
Sbjct: 1373 NIKMKFFEPSERGLVALQGPKAAEVLQKLTDVDLSKLYFMTSTEATVCGCGACRVTRCGY 1432
Query: 517 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TGEDG EIS+P + I ++ +E VKLAGLGARDSL
Sbjct: 1433 TGEDGFEISMPAIKQVDITREIMKNEAVKLAGLGARDSL 1471
>gi|307189253|gb|EFN73696.1| Aminomethyltransferase, mitochondrial [Camponotus floridanus]
Length = 453
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 127/240 (52%), Positives = 166/240 (69%), Gaps = 1/240 (0%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ + ++T LYDLH+ GK+V FAG+ MPVQY +IT SHLHTR+ S+FDV HMLQ
Sbjct: 75 STINEVRKTCLYDLHVEKQGKIVNFAGWLMPVQYQD-TITVSHLHTRTLTSLFDVGHMLQ 133
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V+GK E+LES+ D+ L+ G TL++FTNE+GGI DDLI+TK ED FLVSNA
Sbjct: 134 TRVSGKDAGEYLESLTTCDLKNLNKGAATLTIFTNEKGGILDDLIITKDDEDKYFLVSNA 193
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
RR D L++ Q FK +GK++ + FL ++GLIA+QGP ++T+LQ + DL +L
Sbjct: 194 GRRDEDSQLLLERQKDFKEVGKNVFVDFLEPLQQGLIALQGPTAATVLQSLVNFDLQTLK 253
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM S I G ++R GYTGEDG EISVP + ++VE LL + DVKLAGLGARDSL
Sbjct: 254 FMYSVKTEILGSRIRISRCGYTGEDGFEISVPAKDAINLVEKLLENPDVKLAGLGARDSL 313
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 73/104 (70%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK +GK++ + FL P ++GLIA+QGP ++T+LQ + DL +L FM S I G +
Sbjct: 210 FKEVGKNVFVDFLEPLQQGLIALQGPTAATVLQSLVNFDLQTLKFMYSVKTEILGSRIRI 269
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R GYTGEDG EISVP + ++VE LL + DVKLAGLGARDSL
Sbjct: 270 SRCGYTGEDGFEISVPAKDAINLVEKLLENPDVKLAGLGARDSL 313
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQ 61
I + L KRRR FPGA I SQIK+GV++KR G G P R G I +
Sbjct: 333 IEAALTWLVAKRRRTEANFPGAQQILSQIKTGVTKKRVGLLLGQGPPARQGASILTPEGE 392
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
RVG++TSG PSP+L + IAMGY+ P ++ G + + +R K V+KMPFVK+NYYT
Sbjct: 393 RVGSVTSGGPSPTLGRPIAMGYLPPDWAHNGSGVLIEIRGKTYKATVSKMPFVKTNYYT 451
>gi|147906134|ref|NP_001090416.1| aminomethyltransferase [Xenopus laevis]
gi|114108200|gb|AAI23374.1| MGC154901 protein [Xenopus laevis]
Length = 404
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/241 (55%), Positives = 165/241 (68%), Gaps = 5/241 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S + ++TPLYD H HGGKMV FAG+ +PVQY I ASHLHTR SVFDVSHMLQ
Sbjct: 29 SQTNPPRQTPLYDFHREHGGKMVEFAGWKLPVQYKDSHI-ASHLHTRQHCSVFDVSHMLQ 87
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V GK R ++ES+ VAD+ EL +GTLSLFTNE+GGI DDLIVTKT + L++VSNA
Sbjct: 88 TKVLGKDRIPFMESMVVADIAELKENQGTLSLFTNEKGGIIDDLIVTKTSDGYLYVVSNA 147
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ D M+ FK+ G+D+ L+ + L+AVQGPLS+ +LQ DLS L
Sbjct: 148 GCSEKDSAHMLNKLQAFKAAGRDVDLEHIDC---ALLAVQGPLSARVLQAGLTDDLSKLT 204
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FMTS T+ GIP C +TR GYTGEDGVEISVP ++ + + LL + DVKLAGL ARDS
Sbjct: 205 FMTSVYTTVFGIPGCRVTRCGYTGEDGVEISVPAQRAVELADKLLQNSDVKLAGLAARDS 264
Query: 430 L 430
L
Sbjct: 265 L 265
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 71/109 (65%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I QIK V KR G TSTG P+R I N + +G +TSGCP
Sbjct: 294 GKRRRTAMDFPGASVIVPQIKGKVKHKRVGLTSTGPPVRQHAPILNLEGRVIGEVTSGCP 353
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSL+ N+AMGY+EP Y+K G + VR K VD TKMPFV + YYT
Sbjct: 354 SPSLRVNVAMGYVEPEYAKAGTAVRFEVRKKIVDGVTTKMPFVPAKYYT 402
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FK+ G+D+ L+ + + L+AVQGPLS+ +LQ DLS L FMTS T+ GIP C
Sbjct: 164 FKAAGRDVDLEHI---DCALLAVQGPLSARVLQAGLTDDLSKLTFMTSVYTTVFGIPGCR 220
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP ++ + + LL + DVKLAGL ARDSL
Sbjct: 221 VTRCGYTGEDGVEISVPAQRAVELADKLLQNSDVKLAGLAARDSL 265
>gi|54400544|ref|NP_001006021.1| aminomethyltransferase, mitochondrial [Danio rerio]
gi|53734452|gb|AAH83400.1| Aminomethyltransferase [Danio rerio]
gi|70780331|gb|AAZ08415.1| glycine cleavage system protein T [Danio rerio]
gi|182890318|gb|AAI64008.1| Amt protein [Danio rerio]
Length = 409
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/235 (56%), Positives = 162/235 (68%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H +HGGKMV FAG+SMPVQY IT SH+HTR S+FDVSHMLQT V GK
Sbjct: 41 RKTPLYDFHRAHGGKMVEFAGWSMPVQYKDSHIT-SHMHTRQHCSIFDVSHMLQTKVYGK 99
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R +++ES+ V D+ EL +GTLSLFTN +GGI DDLIVTKT +D L++VSNA D
Sbjct: 100 DRVKFIESLIVGDIAELKDNQGTLSLFTNSKGGIMDDLIVTKTDQDYLYVVSNAGCADKD 159
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M A FKS G D+ L+F+ E LIA+QGP + +LQ+ DL L FMTS
Sbjct: 160 SAHMQARLQEFKSAGHDVDLEFM---EESLIALQGPSMARVLQKGVGDDLKKLTFMTSVL 216
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ GI C +TR GYTGEDGVEISVP + + E LL+D +VKLAGLGARDSL
Sbjct: 217 TPVFGIQGCRVTRCGYTGEDGVEISVPSKDVVLLTEKLLADSEVKLAGLGARDSL 271
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 73/108 (67%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR+ FPGA II QIK+ RKR G STG P+R I +++ + +G +TSGCP
Sbjct: 300 GKRRRQARDFPGADIIVPQIKAKTPRKRVGLISTGPPVRQHTPILSSDGRVIGEVTSGCP 359
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP LK+N+AMGY+E A+SK G + V VR K V V+KMPFV + YY
Sbjct: 360 SPCLKQNVAMGYVETAFSKAGTSIQVEVRKKAVPAVVSKMPFVPTKYY 407
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FKS G D+ L+F+ E LIA+QGP + +LQ+ DL L FMTS + GI C
Sbjct: 170 FKSAGHDVDLEFM---EESLIALQGPSMARVLQKGVGDDLKKLTFMTSVLTPVFGIQGCR 226
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + + E LL+D +VKLAGLGARDSL
Sbjct: 227 VTRCGYTGEDGVEISVPSKDVVLLTEKLLADSEVKLAGLGARDSL 271
>gi|170061082|ref|XP_001866082.1| aminomethyltransferase, mitochondrial [Culex quinquefasciatus]
gi|167879333|gb|EDS42716.1| aminomethyltransferase, mitochondrial [Culex quinquefasciatus]
Length = 413
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 167/243 (68%), Gaps = 3/243 (1%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS RT LY+ H HGGK+V FAG+ +PVQY +SI SHL+TR S+FDVSHMLQ
Sbjct: 29 SSQKEPARTALYEFHQGHGGKLVDFAGYWLPVQYSDLSIIKSHLYTREYGSIFDVSHMLQ 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T + GK ES+C ADV L G GTL++FTN +GGI DDLIV + +D+L++VSNA
Sbjct: 89 TYLRGKDVISCFESVCTADVKGLRNGTGTLTVFTNGKGGILDDLIVNRVSDDTLYVVSNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
SR++ DM +M A FK+ GKD+ ++FLS+E++ L+A+QGP + ++LQ+ DLS L+
Sbjct: 149 SRKETDMGVMSDAVASFKAQGKDVSVEFLSSEDQSLLALQGPSAVSVLQKLCTKDLSRLF 208
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGAR 427
FM IAG+ C +TR GYTGEDGVEIS+P I ALL + ++KLAGLGAR
Sbjct: 209 FMNGITDQIAGVDNCRITRCGYTGEDGVEISIPSRHAPAIANALLDQKVGNLKLAGLGAR 268
Query: 428 DSL 430
DSL
Sbjct: 269 DSL 271
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 7 LLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTST--GVPIRPGYEIFNANDQRVG 64
LL K+RR FPG+ I +QIK+GV+R+R GF + P R E+F+ ++G
Sbjct: 295 LLWLVAKQRRAENNFPGSDKINAQIKNGVTRRRVGFKMSPGSAPARHHVEVFDNEHHKIG 354
Query: 65 AITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
ITSGCPSP L++NIAMGYI KVG EL ++VRDK +V KMPFV ++YY PK
Sbjct: 355 EITSGCPSPCLQQNIAMGYIREESKKVGTELTLKVRDKFYHSQVCKMPFVPTHYYQAPK 413
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 74/107 (69%), Gaps = 3/107 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FK+ GKD+ ++FLS E++ L+A+QGP + ++LQ+ DLS L+FM IAG+ C
Sbjct: 165 FKAQGKDVSVEFLSSEDQSLLALQGPSAVSVLQKLCTKDLSRLFFMNGITDQIAGVDNCR 224
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEIS+P I ALL + ++KLAGLGARDSL
Sbjct: 225 ITRCGYTGEDGVEISIPSRHAPAIANALLDQKVGNLKLAGLGARDSL 271
>gi|195471950|ref|XP_002088265.1| GE18481 [Drosophila yakuba]
gi|194174366|gb|EDW87977.1| GE18481 [Drosophila yakuba]
Length = 405
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/246 (54%), Positives = 165/246 (67%), Gaps = 8/246 (3%)
Query: 191 SSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
SS + E QRT LYD H+ GGK+V F G+++PVQY SI ASHLHTR S+FDVSHML
Sbjct: 19 SSAAGEGQRTALYDFHVQRGGKIVNFGGYALPVQYTDQSIIASHLHTRQVGSIFDVSHML 78
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT V GK LES+C AD+ G G L++FTNE GGI DDLIV K E L++VSN
Sbjct: 79 QTRVFGKDAAACLESVCTADILGTPEGSGGLTVFTNEAGGILDDLIVNKVSEKELYVVSN 138
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLS----STILQRHTDLD 365
A+ ++ DM +M AA D FKS GKD+ ++FL+ ++ L+AVQGP S +L + LD
Sbjct: 139 AAMKEQDMGIMSAAVDNFKSQGKDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD 198
Query: 366 LSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
LYFMTS T+AGIP +TR GYTGEDGVEISV Q + E++L +KLAGL
Sbjct: 199 --QLYFMTSFVTTLAGIPNVRITRCGYTGEDGVEISVESSQVQKLTESILESGVLKLAGL 256
Query: 425 GARDSL 430
GARDSL
Sbjct: 257 GARDSL 262
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNANDQRVGAITSG 69
KRRR T FPGA +I Q+K GVSR+R GF G P R G I + Q+VG +TSG
Sbjct: 292 KRRRTTRDFPGADVILGQLKEGVSRRRVGFQMLGTKPPPARSGVAIL-SQGQQVGQVTSG 350
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
CPSPS +NIAMGY+ G ++ +VRDK + +VTKMPFVK+NYY P
Sbjct: 351 CPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVKANYYNKPN 404
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 77/118 (65%), Gaps = 7/118 (5%)
Query: 443 GSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLS----STILQRHTDLDLSSLYFMT 498
G + + D FKS GKD+ ++FL+P ++ L+AVQGP S +L + LD LYFMT
Sbjct: 147 GIMSAAVDNFKSQGKDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD--QLYFMT 204
Query: 499 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S T+AGIP +TR GYTGEDGVEISV Q + E++L +KLAGLGARDSL
Sbjct: 205 SFVTTLAGIPNVRITRCGYTGEDGVEISVESSQVQKLTESILESGVLKLAGLGARDSL 262
>gi|301614085|ref|XP_002936519.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Xenopus
(Silurana) tropicalis]
Length = 404
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 164/241 (68%), Gaps = 5/241 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S + ++TPLYD H HGGKMV FAG+ +PVQY I ASHLHTR SVFDVSHMLQ
Sbjct: 29 SQTNPPRQTPLYDFHREHGGKMVEFAGWKLPVQYKDTHI-ASHLHTRQHCSVFDVSHMLQ 87
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V GK R ++ES+ VAD+ EL +GTLSLFTNE+GGI DDLIVT T + L++VSNA
Sbjct: 88 TKVLGKDRIPFMESLVVADIGELKENQGTLSLFTNEKGGIIDDLIVTNTSDGYLYVVSNA 147
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ D M+ FK+ G+D+ L+ + L+AVQGPLS+ +LQ + DLS L
Sbjct: 148 GCAEKDSAHMLNKLQEFKAAGRDVDLEHIDC---ALLAVQGPLSARVLQAGMNDDLSKLP 204
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FMTS + GIP C +TR GYTGEDGVEISVP ++ + + LL + DVKLAGL ARDS
Sbjct: 205 FMTSVYTAVFGIPGCRVTRCGYTGEDGVEISVPAQRAVELADKLLQNSDVKLAGLAARDS 264
Query: 430 L 430
L
Sbjct: 265 L 265
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 71/109 (65%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGASII QIK V KR G TSTG P+R I N + +G +TSGCP
Sbjct: 294 GKRRRTAMDFPGASIIVPQIKGKVKHKRVGLTSTGPPVRQHAPILNQEGRIIGEVTSGCP 353
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSL+ N+AMGY+EP Y+K G + VR K VD TKMPFV + YYT
Sbjct: 354 SPSLRVNVAMGYVEPEYAKAGTAVRFEVRKKIVDGVTTKMPFVPTKYYT 402
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FK+ G+D+ L+ + + L+AVQGPLS+ +LQ + DLS L FMTS + GIP C
Sbjct: 164 FKAAGRDVDLEHI---DCALLAVQGPLSARVLQAGMNDDLSKLPFMTSVYTAVFGIPGCR 220
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP ++ + + LL + DVKLAGL ARDSL
Sbjct: 221 VTRCGYTGEDGVEISVPAQRAVELADKLLQNSDVKLAGLAARDSL 265
>gi|198472757|ref|XP_001356055.2| GA19575 [Drosophila pseudoobscura pseudoobscura]
gi|198139149|gb|EAL33114.2| GA19575 [Drosophila pseudoobscura pseudoobscura]
Length = 410
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 166/245 (67%), Gaps = 7/245 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS RT LYD H+ GGK+V F G+++PVQY SI ASHLHTRS S+FDVSHMLQ
Sbjct: 25 SSAGEGNRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRSVGSIFDVSHMLQ 84
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V GK LES+C AD+ + G GTL++FTN+QGGI DDLIV K E L++VSNA
Sbjct: 85 TYVRGKDAAACLESVCTADILGIPEGSGTLTVFTNDQGGILDDLIVNKVSEKELYVVSNA 144
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSST----ILQRHTDLDL 366
+ ++ DM+++ AA FKS G+D+ ++FL+ ++ LIAVQGP + +L T LD
Sbjct: 145 AMKQQDMNIISAAASSFKSQGRDVSVEFLAPSDQSLIAVQGPRVAAELAKLLAPATALD- 203
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
LYFM S T+AGIP +TR GYTGEDGVEISV + EALL++ +KLAGLG
Sbjct: 204 -QLYFMQSFVGTMAGIPNVRITRCGYTGEDGVEISVASGHVQALTEALLANGILKLAGLG 262
Query: 426 ARDSL 430
ARDSL
Sbjct: 263 ARDSL 267
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNAN 59
+ + L KRRR FPGA ++ SQ+K GV R+R G G P R G IF+
Sbjct: 287 VEAALAWLVAKRRRAARDFPGADVVLSQLKGGVQRRRVGLQMLGAKPPPARSGVAIFSGG 346
Query: 60 DQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
Q+VG +TSGCPSPS +NIAMGY+ + G + ++VRDK + ++TK PFVK+NYY
Sbjct: 347 -QQVGQVTSGCPSPSTGRNIAMGYVSESLKAPGSRVELKVRDKVYEAEITKTPFVKANYY 405
Query: 120 TPPKI 124
PKI
Sbjct: 406 NKPKI 410
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR----HTDLDLSSLYFMTSRPCTIAGI 507
FKS G+D+ ++FL+P ++ LIAVQGP + L + T LD LYFM S T+AGI
Sbjct: 161 FKSQGRDVSVEFLAPSDQSLIAVQGPRVAAELAKLLAPATALD--QLYFMQSFVGTMAGI 218
Query: 508 P-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P +TR GYTGEDGVEISV + EALL++ +KLAGLGARDSL
Sbjct: 219 PNVRITRCGYTGEDGVEISVASGHVQALTEALLANGILKLAGLGARDSL 267
>gi|195435113|ref|XP_002065546.1| GK14613 [Drosophila willistoni]
gi|194161631|gb|EDW76532.1| GK14613 [Drosophila willistoni]
Length = 409
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 125/249 (50%), Positives = 168/249 (67%), Gaps = 6/249 (2%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
+ SS + +RT LYD H+ +GGK+V F G+S+PVQY SI +SHL+TR S+FDVS
Sbjct: 18 LASNSSATTPERTALYDFHVKNGGKLVNFCGYSLPVQYADQSIISSHLYTRQVGSIFDVS 77
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
HMLQT V GK +E+IC AD+ L G GTL++FTN+ GGI DDLIV K E L++
Sbjct: 78 HMLQTYVRGKDAATCMETICTADILGLPNGSGTLTVFTNDNGGILDDLIVNKVNEKELYV 137
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLS----STILQRHT 362
VSNA+ ++ DM++M +A FKS GKD+ ++FL+ ++ LIA+QGP + + +L T
Sbjct: 138 VSNAAMKQQDMNIMSSAVSHFKSQGKDVSIEFLTPSDQSLIAIQGPQAVAELAKLLAPQT 197
Query: 363 DLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKL 421
L LYFM S + G+ +TR GYTGEDGVE+SVP Q T + EALL++ +KL
Sbjct: 198 Q-SLDQLYFMNSSTFNVNGLTNIRITRCGYTGEDGVEVSVPSTQVTSLTEALLANGKLKL 256
Query: 422 AGLGARDSL 430
AGLGARDSL
Sbjct: 257 AGLGARDSL 265
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 78/125 (62%), Gaps = 4/125 (3%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFN-A 58
I + L KRRR T FPGA + Q+K GVS++R G G P R G +IFN
Sbjct: 285 IEAALAWLVAKRRRATKDFPGAETVLKQLKEGVSKRRVGLKMLGTKPPPARSGIQIFNDE 344
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ VG ITSGCPSPS+ NIAMGYI+ KVG + ++VRDK + ++TKMPFV +NY
Sbjct: 345 GKELVGQITSGCPSPSIGSNIAMGYIQEKLKKVGTRVQLKVRDKFYEAEITKMPFVGANY 404
Query: 119 YTPPK 123
Y+ PK
Sbjct: 405 YSKPK 409
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLS----STILQRHTDLDLSSLYFMTSRPCTIAGI 507
FKS GKD+ ++FL+P ++ LIA+QGP + + +L T L LYFM S + G+
Sbjct: 158 FKSQGKDVSIEFLTPSDQSLIAIQGPQAVAELAKLLAPQTQ-SLDQLYFMNSSTFNVNGL 216
Query: 508 P-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVE+SVP Q T + EALL++ +KLAGLGARDSL
Sbjct: 217 TNIRITRCGYTGEDGVEVSVPSTQVTSLTEALLANGKLKLAGLGARDSL 265
>gi|126336026|ref|XP_001378019.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Monodelphis
domestica]
Length = 401
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/237 (53%), Positives = 166/237 (70%), Gaps = 5/237 (2%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A ++TPL+D H SHGGKMV FAG+S+PVQY S SHLHTR S+FDVSHMLQT +
Sbjct: 30 ALKKTPLFDFHKSHGGKMVSFAGWSLPVQYQD-SHLESHLHTRRHCSLFDVSHMLQTKIF 88
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G+ R + +ES+ V+D+ EL P +GTL+LFTNE+GGI DDLIVT T + L++VSNA R+
Sbjct: 89 GQDRVKMMESLVVSDIAELKPNQGTLTLFTNEEGGIIDDLIVTNTSDKYLYVVSNAGCRE 148
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
D+ LM +S G D++L+ + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 149 KDLALMQNKASELRSAGWDVNLEV---TDHALMALQGPSAAHVLQAGVSDDLRKLTFMTS 205
Query: 375 RPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+P C +TR GYTGEDGVEISVP E+ H+ EALL +++VKLAGL ARDSL
Sbjct: 206 AVMDVFGVPGCRVTRCGYTGEDGVEISVPAEKAVHLAEALLKNQEVKLAGLAARDSL 262
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 74/109 (67%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA+I+ QIK ++RKR G TSTG PIR I N +G ITSGCP
Sbjct: 291 GKRRRAAMDFPGAAIVVPQIKGKLTRKRVGLTSTGAPIRQHSLIMNTEGAVIGEITSGCP 350
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY++ YSK+G L V VR K+ + V+KMPFV + YYT
Sbjct: 351 SPCLKKNVAMGYVDGQYSKIGTPLMVEVRKKQQEAVVSKMPFVPTRYYT 399
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
+S G D++L+ + L+A+QGP ++ +LQ DL L FMTS + G+P C
Sbjct: 161 LRSAGWDVNLEV---TDHALMALQGPSAAHVLQAGVSDDLRKLTFMTSAVMDVFGVPGCR 217
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP E+ H+ EALL +++VKLAGL ARDSL
Sbjct: 218 VTRCGYTGEDGVEISVPAEKAVHLAEALLKNQEVKLAGLAARDSL 262
>gi|410899182|ref|XP_003963076.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Takifugu
rubripes]
Length = 417
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/242 (54%), Positives = 166/242 (68%), Gaps = 5/242 (2%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
S+ +A ++TPL+D H +HGGKMV FAG+SMPVQY I+ SH+HTR S+FDVSHML
Sbjct: 42 ASAEAALKKTPLFDFHRAHGGKMVEFAGWSMPVQYKDSHIS-SHMHTREHCSIFDVSHML 100
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT V G+ R +++ES+ VAD+ EL +GTL+LFTNEQGGI DDLIVTKT + L++VSN
Sbjct: 101 QTKVHGRDRVKFMESLVVADIAELKDNQGTLTLFTNEQGGIIDDLIVTKTDQGYLYVVSN 160
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A D M A FK+ G D+ L+FL A LIA+QGP S +LQ DLS L
Sbjct: 161 AGCADKDSAHMKARLAEFKAAGFDVDLEFLDA---ALIALQGPSMSRVLQEGLKEDLSKL 217
Query: 370 YFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
FM S + G+P C +TR GYTGEDGVEISVP + + + LL+ +VKLAGLG+RD
Sbjct: 218 TFMNSTLARVFGVPDCRITRCGYTGEDGVEISVPKSRVVEVTDKLLAHSEVKLAGLGSRD 277
Query: 429 SL 430
SL
Sbjct: 278 SL 279
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 78/118 (66%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
+ + L+ GKRRR+T FPGA I+ QIK+ +RKR G STG P+R I + + +
Sbjct: 299 VEATLVWTIGKRRRQTKDFPGADIVIPQIKAKTARKRVGLVSTGPPVRQHTPILSPDGKV 358
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
+G +TSGCPSP LK N+AMGY++ A++K G + V VR K V V++MPFV + YY+
Sbjct: 359 IGEVTSGCPSPCLKMNVAMGYVDAAFTKNGTAIQVEVRKKAVPATVSRMPFVPTKYYS 416
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FK+ G D+ L+FL + LIA+QGP S +LQ DLS L FM S + G+P C
Sbjct: 178 FKAAGFDVDLEFL---DAALIALQGPSMSRVLQEGLKEDLSKLTFMNSTLARVFGVPDCR 234
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + + + LL+ +VKLAGLG+RDSL
Sbjct: 235 ITRCGYTGEDGVEISVPKSRVVEVTDKLLAHSEVKLAGLGSRDSL 279
>gi|348514720|ref|XP_003444888.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Oreochromis
niloticus]
Length = 417
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/241 (55%), Positives = 164/241 (68%), Gaps = 5/241 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ +A ++TPL+D H GGKMV FAG+SMPVQY I ASH+HTR S+FDVSHMLQ
Sbjct: 43 STEAALKKTPLFDFHRDQGGKMVEFAGWSMPVQYKDSHI-ASHMHTREHCSIFDVSHMLQ 101
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V GK R +++ES+ VAD+ EL +GTL+LFTNE+GGI DDLIVTKT + L++VSNA
Sbjct: 102 TNVHGKDRVKFMESLVVADIAELKDNQGTLTLFTNEKGGIIDDLIVTKTDQGYLYVVSNA 161
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
D M A FK G D+ L+FL LIAVQGP S +LQ DLS L
Sbjct: 162 GCADKDSAHMKARLAEFKYAGFDVDLEFLDC---ALIAVQGPTMSRVLQAGLKEDLSKLT 218
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FMTS T+ G+P C +TR GYTGEDGVEIS+P + + E L ++ +VKLAGLGARDS
Sbjct: 219 FMTSALATVFGVPDCRVTRCGYTGEDGVEISIPESRVVELTEKLAANSEVKLAGLGARDS 278
Query: 430 L 430
L
Sbjct: 279 L 279
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 77/118 (65%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
+ + L+ GKRRR+ FPGA II QIK+ +RKR G STG P+R I + + +
Sbjct: 299 VEATLVWTIGKRRRQAKDFPGADIIVPQIKAKTARKRVGLVSTGPPVRQHTPILSPDGKV 358
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
+G +TSGCPSP LK NIAMGY++ A++K G + V VR K V V+KMPFV + YYT
Sbjct: 359 IGEVTSGCPSPCLKNNIAMGYVDAAFAKNGTGIQVEVRKKAVPATVSKMPFVPTKYYT 416
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FK G D+ L+FL + LIAVQGP S +LQ DLS L FMTS T+ G+P C
Sbjct: 178 FKYAGFDVDLEFL---DCALIAVQGPTMSRVLQAGLKEDLSKLTFMTSALATVFGVPDCR 234
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEIS+P + + E L ++ +VKLAGLGARDSL
Sbjct: 235 VTRCGYTGEDGVEISIPESRVVELTEKLAANSEVKLAGLGARDSL 279
>gi|195578305|ref|XP_002079006.1| GD23726 [Drosophila simulans]
gi|194191015|gb|EDX04591.1| GD23726 [Drosophila simulans]
Length = 405
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/246 (53%), Positives = 166/246 (67%), Gaps = 8/246 (3%)
Query: 191 SSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
SS + E QRT LYD H+ GGK+V F G+++PVQY SI ASHLHTR S+FDVSHML
Sbjct: 19 SSAAGEGQRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVSHML 78
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + GK LES+C AD+ G G+L++FTNE GGI DDLIV K E L++VSN
Sbjct: 79 QTRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSN 138
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLS----STILQRHTDLD 365
A+ ++ DM ++ AA D FKS GKD+ ++FL+ ++ L+AVQGP S +L + LD
Sbjct: 139 AAMKEQDMGIIKAAVDNFKSQGKDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD 198
Query: 366 LSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
LYFM+S T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGL
Sbjct: 199 --QLYFMSSFITTLAGIPNVRITRCGYTGEDGVEISVESSQAQKLTESLLESGVLKLAGL 256
Query: 425 GARDSL 430
GARDSL
Sbjct: 257 GARDSL 262
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNANDQRVGAITSG 69
KRRR T FPGA +I Q+K GVSR+R G G P R G IF+ Q VG +TSG
Sbjct: 292 KRRRTTRDFPGADVILRQLKEGVSRRRVGLQMLGTKPPPARSGVAIFSQGKQ-VGQVTSG 350
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
CPSPS +NIAMGY+ G ++ +VRDK + +VTKMPFVK+NYY PK
Sbjct: 351 CPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVKANYYNRPK 404
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 78/118 (66%), Gaps = 7/118 (5%)
Query: 443 GSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLS----STILQRHTDLDLSSLYFMT 498
G +K + D FKS GKD+ ++FL+P ++ L+AVQGP S +L + LD LYFM+
Sbjct: 147 GIIKAAVDNFKSQGKDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD--QLYFMS 204
Query: 499 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGARDSL
Sbjct: 205 SFITTLAGIPNVRITRCGYTGEDGVEISVESSQAQKLTESLLESGVLKLAGLGARDSL 262
>gi|156538178|ref|XP_001601025.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Nasonia
vitripennis]
Length = 413
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 159/234 (67%), Gaps = 1/234 (0%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH+ H GK+V FAG+ +PVQY +I ASH HTR+ SVFDV HMLQT VTG+
Sbjct: 41 RKTCLYDLHVDHNGKIVDFAGWLLPVQYRE-AIAASHQHTRTHASVFDVGHMLQTHVTGR 99
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+LES+ AD+ L G L++FTN+QGGI DDLI+TK +D F+VSNA RR D
Sbjct: 100 DSGEFLESLTTADLQSLKQGSAGLTVFTNDQGGILDDLIITKDRDDKFFVVSNAGRRNED 159
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
LM+ Q K+ GKD+++QFL E+GLIA+QGP ++T+LQ +DL+ L FM S
Sbjct: 160 TALMLKRQSEMKAQGKDVNIQFLDPLEQGLIALQGPSAATVLQSLVQIDLTKLKFMMSVE 219
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I ++R GYTGEDG EIS+PG I E +L + DVKLAGLG RDSL
Sbjct: 220 TEINQKRVRISRCGYTGEDGFEISIPGTDARTITEIILENPDVKLAGLGPRDSL 273
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQ 61
+ + LL KRRR FPGA I QIK+GV++KR G T S G P R I A +
Sbjct: 293 VEATLLWLVAKRRRAEANFPGAQRILDQIKNGVTKKRVGLTLSQGPPARENAPILTAAGE 352
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
RVG +TSG PSP+L K IAMGY+ +K G + V VR K VTKMPFVKSNYYT
Sbjct: 353 RVGKVTSGGPSPTLGKPIAMGYVPLELAKAGTNVLVEVRGKMYKAVVTKMPFVKSNYYT 411
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 70/104 (67%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
K+ GKD+++QFL P E+GLIA+QGP ++T+LQ +DL+ L FM S I +
Sbjct: 170 MKAQGKDVNIQFLDPLEQGLIALQGPSAATVLQSLVQIDLTKLKFMMSVETEINQKRVRI 229
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R GYTGEDG EIS+PG I E +L + DVKLAGLG RDSL
Sbjct: 230 SRCGYTGEDGFEISIPGTDARTITEIILENPDVKLAGLGPRDSL 273
>gi|195339921|ref|XP_002036565.1| GM18702 [Drosophila sechellia]
gi|194130445|gb|EDW52488.1| GM18702 [Drosophila sechellia]
Length = 405
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/246 (53%), Positives = 165/246 (67%), Gaps = 8/246 (3%)
Query: 191 SSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
SS + E QRT LYD H+ GGK+V F G+++PVQY SI ASHLHTR S+FDVSHML
Sbjct: 19 SSAAGEGQRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVSHML 78
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + GK LES+C AD+ G G+L++FTNE GGI DDLIV K E L++VSN
Sbjct: 79 QTRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSN 138
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLS----STILQRHTDLD 365
A+ ++ DM +M A D FKS GKD+ ++FL+ ++ L+AVQGP S +L + LD
Sbjct: 139 AAMKEQDMGIMKTAVDNFKSQGKDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD 198
Query: 366 LSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
LYFM+S T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGL
Sbjct: 199 --QLYFMSSFITTLAGIPNVRITRCGYTGEDGVEISVESRQAQKLTESLLESGVLKLAGL 256
Query: 425 GARDSL 430
GARDSL
Sbjct: 257 GARDSL 262
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNANDQRVGAITSG 69
KRRR T FPGA +I Q+K GVSR+R G G P R G IF+ +Q VG +TSG
Sbjct: 292 KRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVAIFSQGEQ-VGQVTSG 350
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
CPSPS +NIAMGY+ G ++ +VRDK + +VTKMPFVK+NYY PK
Sbjct: 351 CPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVKANYYNRPK 404
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 78/118 (66%), Gaps = 7/118 (5%)
Query: 443 GSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLS----STILQRHTDLDLSSLYFMT 498
G +K + D FKS GKD+ ++FL+P ++ L+AVQGP S +L + LD LYFM+
Sbjct: 147 GIMKTAVDNFKSQGKDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEASLD--QLYFMS 204
Query: 499 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGARDSL
Sbjct: 205 SFITTLAGIPNVRITRCGYTGEDGVEISVESRQAQKLTESLLESGVLKLAGLGARDSL 262
>gi|195161607|ref|XP_002021654.1| GL26626 [Drosophila persimilis]
gi|194103454|gb|EDW25497.1| GL26626 [Drosophila persimilis]
Length = 410
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 165/245 (67%), Gaps = 7/245 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS RT LYD H+ GGK+V F G+++PVQY SI ASHLHTRS S+FDVSHMLQ
Sbjct: 25 SSAGEGNRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRSVGSIFDVSHMLQ 84
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V GK LES+C AD+ G GTL++FTN+QGGI DDLIV K E L++VSNA
Sbjct: 85 TYVRGKDAAACLESVCTADILGTPEGSGTLTVFTNDQGGILDDLIVNKVSEKELYVVSNA 144
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR----HTDLDL 366
+ ++ DM+++ AA FKS G+D+ ++FL+ ++ LIAVQGP + L + T LD
Sbjct: 145 AMKQQDMNIISAAASSFKSQGRDVSVEFLTPSDQSLIAVQGPRVAAELAKLLAPTTALD- 203
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
LYFM S T+AGIP +TR GYTGEDGVEISV + EALL++ +KLAGLG
Sbjct: 204 -QLYFMQSFVGTLAGIPNVRITRCGYTGEDGVEISVASGHVQALTEALLANGILKLAGLG 262
Query: 426 ARDSL 430
ARDSL
Sbjct: 263 ARDSL 267
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNAN 59
+ + L KRRR FPGA ++ SQ+K GV R+R G G P R G IF+
Sbjct: 287 VEAALAWLVAKRRRAARDFPGADVVLSQLKGGVQRRRVGLQMLGAKPPPARSGVAIFSGG 346
Query: 60 DQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
Q+VG +TSGCPSPS +NIAMGY+ + G + ++VRDK + ++TK PFVK+NYY
Sbjct: 347 -QQVGQVTSGCPSPSTGRNIAMGYVSESLKAPGSRVELKVRDKVYEAEITKTPFVKANYY 405
Query: 120 TPPKI 124
PKI
Sbjct: 406 NKPKI 410
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR----HTDLDLSSLYFMTSRPCTIAGI 507
FKS G+D+ ++FL+P ++ LIAVQGP + L + T LD LYFM S T+AGI
Sbjct: 161 FKSQGRDVSVEFLTPSDQSLIAVQGPRVAAELAKLLAPTTALD--QLYFMQSFVGTLAGI 218
Query: 508 P-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P +TR GYTGEDGVEISV + EALL++ +KLAGLGARDSL
Sbjct: 219 PNVRITRCGYTGEDGVEISVASGHVQALTEALLANGILKLAGLGARDSL 267
>gi|194762058|ref|XP_001963177.1| GF15818 [Drosophila ananassae]
gi|190616874|gb|EDV32398.1| GF15818 [Drosophila ananassae]
Length = 405
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/244 (52%), Positives = 164/244 (67%), Gaps = 4/244 (1%)
Query: 191 SSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
SS + E QRT LYD H+ GGK+V F G+++PVQY SI ASHLHTR SVFDVSHML
Sbjct: 19 SSATGEGQRTALYDFHVKKGGKIVKFGGYALPVQYSDQSIIASHLHTRHVGSVFDVSHML 78
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT V GK LES+C AD+ G GTL++FT EQGGI DDLIV K E L++VSN
Sbjct: 79 QTRVFGKDAAACLESVCTADILGTPNGSGTLTVFTTEQGGILDDLIVNKVSEKELYVVSN 138
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLS 367
A+ ++ D +M A ++FKS GKD+ ++FL+ ++ L+AVQGP + L + ++ L
Sbjct: 139 AAMKEQDTGIMSEAVNKFKSQGKDVTIEFLTPSDQSLVAVQGPQVAKELAKLLEKNVSLD 198
Query: 368 SLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
+YFM S T+AGIP +TR GYTGEDGVEISV Q ++ E LL +KLAGLGA
Sbjct: 199 EVYFMQSFVTTLAGIPDVRITRCGYTGEDGVEISVKSSQVENLTECLLESGSLKLAGLGA 258
Query: 427 RDSL 430
RDSL
Sbjct: 259 RDSL 262
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 77/124 (62%), Gaps = 4/124 (3%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNAN 59
+ + L KRRR FPGA+ I Q+K+GVSR+R G G P R G IF+
Sbjct: 282 VEAALAWLVAKRRRTAQDFPGANTIIGQLKTGVSRRRVGLQMLGQKPPPARAGVAIFS-Q 340
Query: 60 DQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
Q+VG +TSGCPSPS KNIAMGY+ + G ++ +++R+K + ++ KMPFVK+NYY
Sbjct: 341 GQQVGQVTSGCPSPSAGKNIAMGYVAESLKAPGTKVELKIREKVYEAEIAKMPFVKANYY 400
Query: 120 TPPK 123
PK
Sbjct: 401 NKPK 404
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTIAGI 507
++FKS GKD+ ++FL+P ++ L+AVQGP + L + ++ L +YFM S T+AGI
Sbjct: 154 NKFKSQGKDVTIEFLTPSDQSLVAVQGPQVAKELAKLLEKNVSLDEVYFMQSFVTTLAGI 213
Query: 508 P-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P +TR GYTGEDGVEISV Q ++ E LL +KLAGLGARDSL
Sbjct: 214 PDVRITRCGYTGEDGVEISVKSSQVENLTECLLESGSLKLAGLGARDSL 262
>gi|194862154|ref|XP_001969934.1| GG23666 [Drosophila erecta]
gi|190661801|gb|EDV58993.1| GG23666 [Drosophila erecta]
Length = 405
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/246 (54%), Positives = 164/246 (66%), Gaps = 8/246 (3%)
Query: 191 SSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
SS + E QRT LYD H+ GGK+V F G+++PVQY SI ASHLHTR S+FDVSHML
Sbjct: 19 SSAAGEGQRTALYDFHVQRGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVSHML 78
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT V GK LESIC AD+ G G L++FTNE GGI DDLIV K E L++VSN
Sbjct: 79 QTRVFGKDAAACLESICTADILGTPEGSGGLTVFTNEAGGILDDLIVNKVSEKELYVVSN 138
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLS----STILQRHTDLD 365
A+ ++ DM +M AA D FKS GKD+ ++FL+ ++ L+AVQGP S +L + LD
Sbjct: 139 AAMKEQDMGIMSAAVDNFKSQGKDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEAALD 198
Query: 366 LSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
LYFM+S + AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGL
Sbjct: 199 --QLYFMSSLVTSFAGIPNVRITRCGYTGEDGVEISVESGQAQRLTESLLESGVLKLAGL 256
Query: 425 GARDSL 430
GARDSL
Sbjct: 257 GARDSL 262
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNANDQRVGAITSG 69
KRRR T FPGA +I Q+K GVSR+R G G P R G I + Q+VG +TSG
Sbjct: 292 KRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVAIIS-QGQQVGQVTSG 350
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
CPSPS +NIAMGY+ G ++ ++VRDK + +VTKMPFVK+NYY PK
Sbjct: 351 CPSPSAGRNIAMGYVPENLKAPGTKVELKVRDKLYEAEVTKMPFVKANYYNRPK 404
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 76/118 (64%), Gaps = 7/118 (5%)
Query: 443 GSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLS----STILQRHTDLDLSSLYFMT 498
G + + D FKS GKD+ ++FL+P ++ L+AVQGP S +L + LD LYFM+
Sbjct: 147 GIMSAAVDNFKSQGKDVTIEFLTPTDQSLVAVQGPQVAKELSKLLAKEAALD--QLYFMS 204
Query: 499 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S + AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGARDSL
Sbjct: 205 SLVTSFAGIPNVRITRCGYTGEDGVEISVESGQAQRLTESLLESGVLKLAGLGARDSL 262
>gi|195386654|ref|XP_002052019.1| GJ23941 [Drosophila virilis]
gi|194148476|gb|EDW64174.1| GJ23941 [Drosophila virilis]
Length = 414
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/239 (53%), Positives = 162/239 (67%), Gaps = 5/239 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H+ GGK+V F G+++PVQY SI ASHL+TR S+FDVSHMLQT V GK
Sbjct: 33 ERTALYDFHVRKGGKIVNFGGYALPVQYSDQSIIASHLYTRRVGSIFDVSHMLQTYVRGK 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LESIC AD+ ++ G G+L++FTN+QGGI DDLIV K + L++VSNA+ ++ D
Sbjct: 93 DAAACLESICTADILDMPAGSGSLTVFTNDQGGILDDLIVNKVSDKELYVVSNAAMKQQD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLS----STILQRHTDLDLSSLYFM 372
M +M AA FKS GKD+ ++FLS + LIAVQGP + S +L + L LYFM
Sbjct: 153 MQIMTAAVSNFKSQGKDVSIEFLSPAHQSLIAVQGPQAAQELSKLLPQPKAKALEQLYFM 212
Query: 373 TSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S +AGI +TR GYTGEDGVEISVP Q + EALL+ +KLAGLGARDSL
Sbjct: 213 RSGIFELAGISNVRITRCGYTGEDGVEISVPSTQVETLTEALLAAGQLKLAGLGARDSL 271
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNAN 59
+ + L KRRR T FPGA I Q+K G R+R G G P R G IF+
Sbjct: 291 VEAALAWLVAKRRRSTSDFPGAQTILQQLKEGAQRRRVGLQMLGAKAPPARAGVAIFSGG 350
Query: 60 DQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
Q VG +TSGCPSPS +NIAMGY+ K G ++ ++VRDK + ++T+MPFVK+NYY
Sbjct: 351 KQ-VGQLTSGCPSPSTGRNIAMGYVAEQLKKPGTQVELKVRDKFYEAEITRMPFVKANYY 409
Query: 120 TPPK 123
PK
Sbjct: 410 NKPK 413
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 71/109 (65%), Gaps = 5/109 (4%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLS----STILQRHTDLDLSSLYFMTSRPCTIAGI 507
FKS GKD+ ++FLSP + LIAVQGP + S +L + L LYFM S +AGI
Sbjct: 163 FKSQGKDVSIEFLSPAHQSLIAVQGPQAAQELSKLLPQPKAKALEQLYFMRSGIFELAGI 222
Query: 508 P-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP Q + EALL+ +KLAGLGARDSL
Sbjct: 223 SNVRITRCGYTGEDGVEISVPSTQVETLTEALLAAGQLKLAGLGARDSL 271
>gi|242003124|ref|XP_002422618.1| aminomethyltransferase,putative [Pediculus humanus corporis]
gi|212505419|gb|EEB09880.1| aminomethyltransferase,putative [Pediculus humanus corporis]
Length = 404
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/263 (50%), Positives = 172/263 (65%), Gaps = 5/263 (1%)
Query: 173 FLKFLSFFS-GLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITA 231
LK FF GL + S+ +T LYD H+ + GKMV FAGF +PVQYG+ SIT+
Sbjct: 3 LLKIPYFFQYGLKLLVRNISTGIEPVKTALYDFHVENNGKMVDFAGFLLPVQYGSDSITS 62
Query: 232 SHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGI 290
SHLHTR S+FDVSHMLQT + GK R E +E I ADV L KG+L++FT++ GGI
Sbjct: 63 SHLHTRKNCSIFDVSHMLQTKIHGKDRIELIERITTADVGGLPENKGSLTVFTDKVTGGI 122
Query: 291 QDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQ 350
DDLIVTKT + L++VSNA RR D DLM+ + KS K++ ++FL E LIAVQ
Sbjct: 123 LDDLIVTKTGDGYLYVVSNAGRRDHDKDLMLRTEKEMKSENKNVDVEFLHLHEWSLIAVQ 182
Query: 351 GPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHI 409
GP + +LQ D+ L L+FM S T+A +P C +TR GYTGEDGVEISVP ++ ++
Sbjct: 183 GPETPAVLQPLCDVPLDKLFFMESTLATVANVPGCRVTRCGYTGEDGVEISVPSDKIVNV 242
Query: 410 VEALLSDE--DVKLAGLGARDSL 430
LL + +VKLAGLG RDSL
Sbjct: 243 TRELLKSKTGNVKLAGLGVRDSL 265
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTST-GVPIRPGYEIFNANDQRVGAITSGCP 71
K+RRE FPG II Q+K G +KR G ST G P R I N + +G ITSGCP
Sbjct: 295 KKRRERKDFPGWEIILKQLKEGTLKKRIGLKSTKGPPPRHDCIIENDSGNPIGKITSGCP 354
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPS+ +++MGY+E YSK G +++V++R K+ VTKMPF+ SNYY
Sbjct: 355 SPSIGGSVSMGYVEKKYSKNGTQVFVKIRGKQYPATVTKMPFIPSNYYN 403
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
KS K++ ++FL E LIAVQGP + +LQ D+ L L+FM S T+A +P C
Sbjct: 159 MKSENKNVDVEFLHLHEWSLIAVQGPETPAVLQPLCDVPLDKLFFMESTLATVANVPGCR 218
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEISVP ++ ++ LL + +VKLAGLG RDSL
Sbjct: 219 VTRCGYTGEDGVEISVPSDKIVNVTRELLKSKTGNVKLAGLGVRDSL 265
>gi|195117468|ref|XP_002003269.1| GI23443 [Drosophila mojavensis]
gi|193913844|gb|EDW12711.1| GI23443 [Drosophila mojavensis]
Length = 410
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 168/246 (68%), Gaps = 9/246 (3%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ SA +RT L+D H+ +GGK+V F G+++PVQY SI ASHL+TR S+FDVSHMLQ
Sbjct: 25 SASSAGERTALFDFHVRNGGKIVNFGGYALPVQYSDQSIIASHLYTRGVGSIFDVSHMLQ 84
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ V GK LES+C AD+ E+ G G+L++FTNEQGGI DDLIV K E L++VSNA
Sbjct: 85 SYVRGKDAAACLESVCTADILEMPGGSGSLTVFTNEQGGILDDLIVNKVSEQELYVVSNA 144
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL-----D 365
+ ++ D ++M +A RFKS GKD+ ++FLS ++ LIAVQGP + Q+ L
Sbjct: 145 AMKQQDQEIMSSAVSRFKSQGKDVSIEFLSPADQSLIAVQGP---QVAQQLAKLLPQPKA 201
Query: 366 LSSLYFMTSRPCTIAGI-PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
L LYFM S +AGI +TR GYTGEDGVEISV Q + EALL+ +++LAGL
Sbjct: 202 LEQLYFMRSGVFELAGIRNVRITRCGYTGEDGVEISVQSAQVEALTEALLAAGELRLAGL 261
Query: 425 GARDSL 430
GARDSL
Sbjct: 262 GARDSL 267
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 76/124 (61%), Gaps = 4/124 (3%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNAN 59
+ + L KRRR T FPGA I Q+K GV R+R G G P R G IF+
Sbjct: 287 VEAALAWLVAKRRRTTADFPGAQPILQQLKEGVQRRRIGLQMLGAKVPPARAGVAIFSGG 346
Query: 60 DQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
Q+VG +TSGCPSPS +NIAMGY+ K G +L ++VRDK + +VT+MPFVK+NYY
Sbjct: 347 -QQVGRVTSGCPSPSTGRNIAMGYVTEQLKKPGTKLELKVRDKFYEAEVTRMPFVKANYY 405
Query: 120 TPPK 123
PK
Sbjct: 406 NKPK 409
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 72/111 (64%), Gaps = 9/111 (8%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDL-----DLSSLYFMTSRPCTIA 505
RFKS GKD+ ++FLSP ++ LIAVQGP + Q+ L L LYFM S +A
Sbjct: 160 RFKSQGKDVSIEFLSPADQSLIAVQGP---QVAQQLAKLLPQPKALEQLYFMRSGVFELA 216
Query: 506 GI-PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GI +TR GYTGEDGVEISV Q + EALL+ +++LAGLGARDSL
Sbjct: 217 GIRNVRITRCGYTGEDGVEISVQSAQVEALTEALLAAGELRLAGLGARDSL 267
>gi|324515608|gb|ADY46258.1| Aminomethyltransferase [Ascaris suum]
Length = 402
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 130/243 (53%), Positives = 167/243 (68%), Gaps = 5/243 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + +RT LYDLH H KMVPFAG+ MPVQYG +I S +HTR VSVFDVSHMLQ
Sbjct: 19 ASSANTKRTCLYDLHTQHWAKMVPFAGYEMPVQYGDHTIADSTVHTRKHVSVFDVSHMLQ 78
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T +TGK R E++ES+ ADV L +GTLS+FTNE+GGI+DDLIVTKT +++V+NA
Sbjct: 79 THITGKDRVEFIESLTTADVQGLQDNQGTLSVFTNERGGIKDDLIVTKTDLGYIYMVTNA 138
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
D+ ++ + ++ GKD+ ++ L E RGL+AVQGP + +LQ TD DLS LY
Sbjct: 139 GCIDKDLPYLLEKSEEWRKKGKDVEVKPL--EGRGLVAVQGPGMAKLLQGETDFDLSKLY 196
Query: 371 FMTSRPCTIAGI-PCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGAR 427
FM S T+ GI C +TR GYTGEDGVEISV +VE LL + E V++AGLGAR
Sbjct: 197 FMHSTVGTVFGIRDCRVTRCGYTGEDGVEISVEPRYAAELVENLLRSTKEKVRMAGLGAR 256
Query: 428 DSL 430
D+L
Sbjct: 257 DAL 259
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
Query: 449 NDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI- 507
++ ++ GKD+ ++ L E RGL+AVQGP + +LQ TD DLS LYFM S T+ GI
Sbjct: 152 SEEWRKKGKDVEVKPL--EGRGLVAVQGPGMAKLLQGETDFDLSKLYFMHSTVGTVFGIR 209
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
C +TR GYTGEDGVEISV +VE LL + E V++AGLGARD+L
Sbjct: 210 DCRVTRCGYTGEDGVEISVEPRYAAELVENLLRSTKEKVRMAGLGARDAL 259
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 7 LLIFPGKRRRETGGFPGASIIQSQI-KSGVSRKRTGFTS-TGVPIRPGYEIFN-ANDQRV 63
L KRRR+T FPGA +I SQ+ K ++R G S G R I + + V
Sbjct: 283 LAFVVAKRRRQTKDFPGAEVIVSQLEKKNWPKRRVGLLSDKGRAPRSHLPIIDPISKAVV 342
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
G +TSGCPSP+LKKNI M Y++ SKVG EL V ++ V VTKMPFV + YY PPK
Sbjct: 343 GFVTSGCPSPNLKKNIGMAYVDKQDSKVGKELMVDFGGRQSKVTVTKMPFVPNTYYNPPK 402
>gi|47212973|emb|CAF93361.1| unnamed protein product [Tetraodon nigroviridis]
Length = 376
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 167/238 (70%), Gaps = 7/238 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+D H +HGGKMV FAG+SMPVQY I+ SH+HTR + S+FDVSHMLQT V G+
Sbjct: 5 KKTPLFDFHRAHGGKMVEFAGWSMPVQYKDSHIS-SHMHTRERCSIFDVSHMLQTKVHGR 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN---ASRR 313
R +++ES+ VAD+ EL +GTL+LFTNE+GGI DDLIVTKT + L++VSN A +
Sbjct: 64 DRVKFMESLVVADIAELRENQGTLTLFTNERGGIIDDLIVTKTDQGYLYVVSNAGCADKD 123
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ + A FK+ G D+ L+FL E+ LIA+QGP S +LQ DL L FMT
Sbjct: 124 SAHLKVKWAWLAEFKAAGFDVDLEFL--EDAALIALQGPSMSRVLQEGLKEDLGKLTFMT 181
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S+ T+ G+P C +TR GYTGEDGVEISVP + + + LL+ +VKLAGLGARDSL
Sbjct: 182 SQMATVFGVPDCRITRCGYTGEDGVEISVPQSRVVEVTDKLLAHSEVKLAGLGARDSL 239
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 78/118 (66%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
+ + L+ GKRRR++ FPGA ++ QIK+ +RKR G STG P+R I + + +
Sbjct: 259 VEATLVWTIGKRRRQSKDFPGADVVIPQIKAKTARKRVGLISTGPPVRQHTPILSPDGKV 318
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
+G +TSGCPSP LK N+AMGY++ A++K G + V VR + V V+KMPFV + YY+
Sbjct: 319 IGEVTSGCPSPCLKMNVAMGYVDTAFAKNGTAIQVEVRKRAVPATVSKMPFVPTKYYS 376
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FK+ G D+ L+FL E+ LIA+QGP S +LQ DL L FMTS+ T+ G+P C
Sbjct: 137 FKAAGFDVDLEFL--EDAALIALQGPSMSRVLQEGLKEDLGKLTFMTSQMATVFGVPDCR 194
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + + + LL+ +VKLAGLGARDSL
Sbjct: 195 ITRCGYTGEDGVEISVPQSRVVEVTDKLLAHSEVKLAGLGARDSL 239
>gi|20129441|ref|NP_609441.1| CG6415 [Drosophila melanogaster]
gi|7297745|gb|AAF52996.1| CG6415 [Drosophila melanogaster]
Length = 405
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 163/244 (66%), Gaps = 4/244 (1%)
Query: 191 SSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
SS + E QRT LYD H+ GGK+V F G+++PVQY SI ASHLHTR S+FDVSHML
Sbjct: 19 SSAAGEGQRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVSHML 78
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
Q+ + GK LES+C AD+ G G+L++FTNE GGI DDLIV K E L++VSN
Sbjct: 79 QSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSN 138
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLS 367
A+ ++ DM +M A D FKS GKD+ ++FL+ ++ L+AVQGP + L + L
Sbjct: 139 AAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLD 198
Query: 368 SLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
LYFM+S T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGA
Sbjct: 199 QLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGA 258
Query: 427 RDSL 430
RDSL
Sbjct: 259 RDSL 262
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNANDQRVGAITSG 69
KRRR T FPGA +I Q+K GVSR+R G G P R G IF+ Q+VG +TSG
Sbjct: 292 KRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVAIFS-QGQQVGQVTSG 350
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
CPSPS +NIAMGY+ G ++ +VRDK + +VTKMPFVK+NYY PK
Sbjct: 351 CPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVKANYYNRPK 404
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query: 443 GSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSR 500
G +K + D FKS GKD+ ++FL+P ++ L+AVQGP + L + L LYFM+S
Sbjct: 147 GIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLDQLYFMSSF 206
Query: 501 PCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGARDSL
Sbjct: 207 VTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGARDSL 262
>gi|60677753|gb|AAX33383.1| RH05648p [Drosophila melanogaster]
Length = 409
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 163/244 (66%), Gaps = 4/244 (1%)
Query: 191 SSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
SS + E QRT LYD H+ GGK+V F G+++PVQY SI ASHLHTR S+FDVSHML
Sbjct: 23 SSAAGEGQRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVSHML 82
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
Q+ + GK LES+C AD+ G G+L++FTNE GGI DDLIV K E L++VSN
Sbjct: 83 QSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSN 142
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLS 367
A+ ++ DM +M A D FKS GKD+ ++FL+ ++ L+AVQGP + L + L
Sbjct: 143 AAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLD 202
Query: 368 SLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
LYFM+S T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGA
Sbjct: 203 QLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGA 262
Query: 427 RDSL 430
RDSL
Sbjct: 263 RDSL 266
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNANDQRVGAITSG 69
KRRR T FPGA +I Q+K GVSR+R G G P R G IF+ Q+VG +TSG
Sbjct: 296 KRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVAIFS-QGQQVGQVTSG 354
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
CPSPS +NIAMGY+ G ++ +VRDK + +VTKMPFVK+NYY PK
Sbjct: 355 CPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVKANYYNRPK 408
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query: 443 GSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSR 500
G +K + D FKS GKD+ ++FL+P ++ L+AVQGP + L + L LYFM+S
Sbjct: 151 GIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLDQLYFMSSF 210
Query: 501 PCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGARDSL
Sbjct: 211 VTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGARDSL 266
>gi|388452581|ref|NP_001253429.1| aminomethyltransferase, mitochondrial [Macaca mulatta]
gi|84579179|dbj|BAE73023.1| hypothetical protein [Macaca fascicularis]
gi|355762088|gb|EHH61883.1| hypothetical protein EGM_20034 [Macaca fascicularis]
gi|380811866|gb|AFE77808.1| aminomethyltransferase, mitochondrial isoform 1 precursor [Macaca
mulatta]
gi|384942496|gb|AFI34853.1| aminomethyltransferase, mitochondrial isoform 1 precursor [Macaca
mulatta]
gi|384942498|gb|AFI34854.1| aminomethyltransferase, mitochondrial isoform 1 precursor [Macaca
mulatta]
Length = 403
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 163/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKIFGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQASVADDLKKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLATALLKNPEVKLAGLAARDSL 264
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQASVADDLKKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLATALLKNPEVKLAGLAARDSL 264
>gi|402860101|ref|XP_003894474.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1 [Papio
anubis]
Length = 403
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 163/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKIFGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQASVADDLKKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLATALLKNPEVKLAGLAARDSL 264
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVSTNYYT 401
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQASVADDLKKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLATALLKNPEVKLAGLAARDSL 264
>gi|355559637|gb|EHH16365.1| hypothetical protein EGK_11636 [Macaca mulatta]
Length = 403
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 163/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKIFGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQASVADDLKKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLATALLKNPEVKLAGLAARDSL 264
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 68/109 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+ V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLNGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQASVADDLKKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLATALLKNPEVKLAGLAARDSL 264
>gi|296225202|ref|XP_002758391.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1
[Callithrix jacchus]
Length = 403
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/238 (55%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVVFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKICGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ ALL D +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLQDPEVKLAGLAARDSL 264
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTMIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTKLMVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL D +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLQDPEVKLAGLAARDSL 264
>gi|327265707|ref|XP_003217649.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Anolis
carolinensis]
Length = 407
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 156/235 (66%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD H HGGKMV FAG+S+PVQY S SHLHTR + S+FDVSHMLQT V GK
Sbjct: 38 KRTPLYDFHRHHGGKMVGFAGWSLPVQY-THSHLESHLHTRKQCSLFDVSHMLQTKVFGK 96
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R ++LES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T ED L++VSNA + D
Sbjct: 97 DRVKFLESLVVGDIAELKPNQGTLSLFTNENGGIIDDLIVTSTSEDHLYVVSNAGCMEKD 156
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
LM K+ G D+HL+ E L+A+QGP S +LQ + L+ + FM+S
Sbjct: 157 FALMQNKAKEMKASGSDVHLE---VSENALLALQGPAMSQVLQSGVNDSLAKMPFMSSAA 213
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP + + E LL + V LAGL ARDSL
Sbjct: 214 MAVFGVQGCRVTRCGYTGEDGVEISVPASRVVELAELLLKNPTVWLAGLAARDSL 268
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 72/109 (66%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGASII +QIK RKR G TS G PIR I D+ +G ITSGCP
Sbjct: 297 GKRRRVAMDFPGASIILAQIKEKPKRKRVGLTSIGPPIRQHVPILGPKDKAIGEITSGCP 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP L+KN+AMGY+E YSKVG L V VR K VTKMPFV ++YY+
Sbjct: 357 SPCLQKNVAMGYVESEYSKVGTSLTVEVRKKSCPSLVTKMPFVPTHYYS 405
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
K+ G D+HL+ E L+A+QGP S +LQ + L+ + FM+S + G+ C
Sbjct: 167 MKASGSDVHLEV---SENALLALQGPAMSQVLQSGVNDSLAKMPFMSSAAMAVFGVQGCR 223
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + + E LL + V LAGL ARDSL
Sbjct: 224 VTRCGYTGEDGVEISVPASRVVELAELLLKNPTVWLAGLAARDSL 268
>gi|410951175|ref|XP_003982274.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1 [Felis
catus]
Length = 403
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 159/235 (67%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S ASHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHVASHLHTRRHCSLFDVSHMLQTKILGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTSTSEGYLYVVSNAGCWDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM +++G D+ L+ + + GL+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQGKVRELQNMGSDVSLEVV---DNGLLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLENPEVKLAGLAARDSL 264
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 68/109 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRTAMDFPGASVILPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTMIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPCLKKNVAMGYVPCEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYYT 401
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
+++G D+ L+ + + GL+A+QGP ++ +LQ DL L FMTS + G+ C
Sbjct: 163 LQNMGSDVSLEVV---DNGLLALQGPTAAQVLQAGVADDLRKLPFMTSAVMEVFGVSGCR 219
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 220 VTRCGYTGEDGVEISVPAAGAVHLATALLENPEVKLAGLAARDSL 264
>gi|403291245|ref|XP_003936709.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1 [Saimiri
boliviensis boliviensis]
Length = 403
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYQD-SHTDSHLHTRQHCSLFDVSHMLQTKICGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLENPEVKLAGLAARDSL 264
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTMIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPFEYSRPGTKLMVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLENPEVKLAGLAARDSL 264
>gi|346986410|ref|NP_001231355.1| glycine cleavage system T-protein [Sus scrofa]
Length = 403
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 161/238 (67%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRQHCSLFDVSHMLQTKIFGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA R+ D
Sbjct: 93 DRVKMMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCREKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QDR + L G DI L+ + + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LTLM---QDRVRELQNTGGDIGLEVM---DNALLALQGPTAAQVLQAGVTDDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP + + ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVRLATALLENPEVKLAGLAARDSL 264
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 70/109 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I Q+KS V R+R G T G P+R I + +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGASVIVPQLKSKVQRRRVGLTCEGAPVRAHSPILSTEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ +S+ G L V VR K+ V+KMPFV ++YYT
Sbjct: 353 SPCLKKNVAMGYVPYEHSRPGTLLLVEVRRKQQVAVVSKMPFVPTSYYT 401
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L DR + L G DI L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LTLMQDRVRELQNTGGDIGLEVM---DNALLALQGPTAAQVLQAGVTDDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + + ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVRLATALLENPEVKLAGLAARDSL 264
>gi|332215944|ref|XP_003257101.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1
[Nomascus leucogenys]
Length = 403
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKLRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 67/109 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGINIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV + YYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTKYYT 401
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKLRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
>gi|397496151|ref|XP_003818906.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1 [Pan
paniscus]
Length = 403
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
>gi|395856441|ref|XP_003800637.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1
[Otolemur garnettii]
Length = 404
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 157/235 (66%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 35 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRQHCSLFDVSHMLQTKILGS 93
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ESI V D+ EL P +GTLSLFTNE GGI DDLIVT E L++VSNA R+ D
Sbjct: 94 DRVKLMESIVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNASEGHLYVVSNAGCREKD 153
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM ++ G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 154 LALMQEKVKELQNRGSDVALEVV---DNALLALQGPTAAQVLQAGVADDLKKLPFMTSAV 210
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 211 MEVFGVSGCRVTRCGYTGEDGVEISVPAVGVIHLATALLENPEVKLAGLAARDSL 265
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 67/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA I Q+K V R+R G G P+R I + +G +TSGCP
Sbjct: 294 GKRRRAAMDFPGAKAIVPQLKGKVQRRRVGLMCEGAPMREHSPILSMEGAVIGTVTSGCP 353
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP LKKN+AMGY+ YS+ G +L V VR K+ V V+KMPFV +NYY
Sbjct: 354 SPCLKKNVAMGYVPYEYSRPGTQLLVEVRRKQQMVVVSKMPFVPTNYY 401
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L ++ K L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 154 LALMQEKVKELQNRGSDVALEVV---DNALLALQGPTAAQVLQAGVADDLKKLPFMTSAV 210
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 211 MEVFGVSGCRVTRCGYTGEDGVEISVPAVGVIHLATALLENPEVKLAGLAARDSL 265
>gi|114586877|ref|XP_517018.2| PREDICTED: aminomethyltransferase, mitochondrial isoform 3 [Pan
troglodytes]
Length = 403
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
>gi|426340539|ref|XP_004034186.1| PREDICTED: aminomethyltransferase, mitochondrial-like isoform 1
[Gorilla gorilla gorilla]
Length = 403
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 159/235 (67%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELGPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM ++ G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDNVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDNVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
>gi|297671332|ref|XP_002813795.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1 [Pongo
abelii]
Length = 403
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTSTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 264
>gi|355668204|gb|AER94115.1| aminomethyltransferase [Mustela putorius furo]
Length = 373
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 158/235 (67%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 5 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKILGC 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA D
Sbjct: 64 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTSTSEGYLYVVSNAGCWDKD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM F++ G+D+ L+ + E L+A+QGP ++ +LQ DL L FMTS
Sbjct: 124 LALMQDKVREFQNTGRDVSLEVV---ENALLALQGPTAAQVLQAGVAEDLRKLPFMTSAV 180
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+P C +TR GYTGEDG+EISVP + ALL + +VKLAGL ARDSL
Sbjct: 181 MEVFGVPDCRVTRCGYTGEDGMEISVPAVAAVRLATALLENPEVKLAGLAARDSL 235
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I +Q+K V RKR G G P+R I N +G +TSGCP
Sbjct: 264 GKRRRVAMDFPGASVIVAQLKGKVQRKRVGLICEGAPMRAHSPILNTEGTVIGTVTSGCP 323
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 324 SPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQVAVVSKMPFVTTNYYT 372
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 445 LKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ F++ G+D+ L+ + E L+A+QGP ++ +LQ DL L FMTS
Sbjct: 124 LALMQDKVREFQNTGRDVSLEVV---ENALLALQGPTAAQVLQAGVAEDLRKLPFMTSAV 180
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+P C +TR GYTGEDG+EISVP + ALL + +VKLAGL ARDSL
Sbjct: 181 MEVFGVPDCRVTRCGYTGEDGMEISVPAVAAVRLATALLENPEVKLAGLAARDSL 235
>gi|62078737|ref|NP_001014026.1| aminomethyltransferase, mitochondrial [Rattus norvegicus]
gi|53733571|gb|AAH83803.1| Aminomethyltransferase (glycine cleavage system protein T) [Rattus
norvegicus]
gi|149018543|gb|EDL77184.1| aminomethyltransferase (glycine cleavage system protein T), isoform
CRA_a [Rattus norvegicus]
Length = 403
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 157/235 (66%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKIFGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R +E+I V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA R D
Sbjct: 93 DRVRLMENIVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCRDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM F++ G D+ L+ + + L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---DNALLALQGPTAAQVLQAGVTDDMRKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLKNPEVKLAGLAARDSL 264
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 68/109 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA II Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRVAMDFPGAKIIIPQLKGEVQRRRVGLICEGAPMRAHSPILNTEGAVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV + YYT
Sbjct: 353 SPSLKKNVAMGYVAFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTKYYT 401
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ F++ G D+ L+ + + L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---DNALLALQGPTAAQVLQAGVTDDMRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLKNPEVKLAGLAARDSL 264
>gi|75765383|pdb|1WSR|A Chain A, Crystal Structure Of Human T-Protein Of Glycine Cleavage
System
gi|75765384|pdb|1WSR|B Chain B, Crystal Structure Of Human T-Protein Of Glycine Cleavage
System
gi|75765385|pdb|1WSV|A Chain A, Crystal Structure Of Human T-Protein Of Glycine Cleavage
System
gi|75765386|pdb|1WSV|B Chain B, Crystal Structure Of Human T-Protein Of Glycine Cleavage
System
Length = 375
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 6 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 65 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 124
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 125 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 178
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 179 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 236
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 265 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 324
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 325 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 373
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 125 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 181
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 182 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 236
>gi|44662838|ref|NP_000472.2| aminomethyltransferase, mitochondrial isoform 1 precursor [Homo
sapiens]
gi|1346122|sp|P48728.1|GCST_HUMAN RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|391721|dbj|BAA02967.1| glycine cleavage system T-protein [Homo sapiens]
gi|119585388|gb|EAW64984.1| hCG2001997, isoform CRA_a [Homo sapiens]
gi|119585390|gb|EAW64986.1| hCG2001997, isoform CRA_a [Homo sapiens]
gi|158254632|dbj|BAF83289.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
>gi|291237444|ref|XP_002738645.1| PREDICTED: CG6415-like [Saccoglossus kowalevskii]
Length = 414
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 163/236 (69%), Gaps = 6/236 (2%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LYD HL HGGKMVPFAGFSMPVQY + A HLHTR+ VS+FDVSHM Q+ V GK
Sbjct: 43 KTCLYDFHLEHGGKMVPFAGFSMPVQYKE-GLLAEHLHTRNTVSLFDVSHMQQSKVYGKD 101
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
R +++ES+ V DV L GTLSLFTN +GGIQDDLIV+KT ED L++VSNA D+
Sbjct: 102 RIQFIESLIVGDVAGLPDNTGTLSLFTNHKGGIQDDLIVSKTTEDYLYIVSNAGCIDKDI 161
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
M A + KS G D+ + ++ +R L+A+QGPL + +LQ DL FM +
Sbjct: 162 ANMKAQEVAMKSQGFDVTFEPIT--DRALLALQGPLMTKVLQNGIRSDLKDFTFMKTAEM 219
Query: 378 TIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 430
++ G+P C +TR GYTGEDGVEIS+P + +V++L+S + +VKLAGLGARDSL
Sbjct: 220 SVYGVPNCRVTRCGYTGEDGVEISIPIKHVLEVVDSLMSCQLAEVKLAGLGARDSL 275
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 75/109 (68%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
KRRR+ FPGA II Q+K RKR G S+G P R G +I + + + +G +TSGCP
Sbjct: 304 AKRRRQESNFPGAEIILKQLKEKPKRKRVGIVSSGPPARAGTQILDESGEPIGHLTSGCP 363
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP+LKKN+AMGY+ ++K G +L ++VR K++D +V KMPFV + YYT
Sbjct: 364 SPTLKKNVAMGYVTTKHAKNGTKLKLQVRKKQIDAQVCKMPFVPTKYYT 412
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 443 GSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 502
++K KS G D+ + ++ +R L+A+QGPL + +LQ DL FM +
Sbjct: 162 ANMKAQEVAMKSQGFDVTFEPIT--DRALLALQGPLMTKVLQNGIRSDLKDFTFMKTAEM 219
Query: 503 TIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
++ G+P C +TR GYTGEDGVEIS+P + +V++L+S + +VKLAGLGARDSL
Sbjct: 220 SVYGVPNCRVTRCGYTGEDGVEISIPIKHVLEVVDSLMSCQLAEVKLAGLGARDSL 275
>gi|994761|dbj|BAA03512.1| glycine cleavage system T-protein [Homo sapiens]
Length = 403
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRCKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
>gi|62000670|ref|NP_001013836.1| aminomethyltransferase, mitochondrial precursor [Mus musculus]
gi|34921724|sp|Q8CFA2.1|GCST_MOUSE RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|23094392|emb|CAD26917.1| aminomethyltransferase [Mus musculus]
gi|124297929|gb|AAI32278.1| Aminomethyltransferase [Mus musculus]
gi|124298188|gb|AAI32280.1| Aminomethyltransferase [Mus musculus]
gi|148689328|gb|EDL21275.1| aminomethyltransferase [Mus musculus]
Length = 403
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 175/285 (61%), Gaps = 15/285 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHVDSHLHTRRHCSLFDVSHMLQTKIFGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + LES+ V D+ EL P +GTLSLFTNE GGI DDLIV+ T E L++VSNA R D
Sbjct: 93 DRVKLLESVVVGDIAELRPNQGTLSLFTNEAGGILDDLIVSNTSEGHLYVVSNAGCRDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM F++ G D+ L+ + E L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---ENALLALQGPTATQVLQAGVTDDMKKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL----- 430
+ G+ C +TR GYTGEDGVEISVP H+ LL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPATGAVHLATTLLKNPEVKLAGLAARDSLRLEAG 269
Query: 431 ----SGDITLNTPVPHGSLKLSNDRFKSLGKDI-HLQFLSPEERG 470
DI +T GSL + + + + D + + P+ +G
Sbjct: 270 LCLYGNDIDEHTTPVEGSLSWTLGKRRRIAMDFPGAKIIVPQLKG 314
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA II Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRIAMDFPGAKIIVPQLKGEVQRRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYYT 401
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ F++ G D+ L+ + E L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---ENALLALQGPTATQVLQAGVTDDMKKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ LL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPATGAVHLATTLLKNPEVKLAGLAARDSL 264
>gi|48257290|gb|AAH07546.2| AMT protein [Homo sapiens]
Length = 383
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 31 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 89
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 90 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 149
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 150 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 203
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 204 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 261
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 290 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 349
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRV 99
SPSLKKN+AMGY+ YS+ G L V +
Sbjct: 350 SPSLKKNVAMGYVPCEYSRPGTMLLVEL 377
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 150 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 206
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 207 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 261
>gi|257796258|ref|NP_001158184.1| aminomethyltransferase, mitochondrial isoform 4 precursor [Homo
sapiens]
Length = 386
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRV 99
SPSLKKN+AMGY+ YS+ G L V +
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEL 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
>gi|431913423|gb|ELK15098.1| Aminomethyltransferase, mitochondrial [Pteropus alecto]
Length = 470
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 158/235 (67%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY I SHLHTR S+FDVSHMLQT + G+
Sbjct: 101 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHID-SHLHTRQLCSLFDVSHMLQTKIYGR 159
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNAS D
Sbjct: 160 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNASCWDKD 219
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM +++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 220 LVLMQDKVRELQNMGSDVGLEVM---DNALLALQGPTAAQVLQAGVTDDLRKLPFMTSAV 276
Query: 377 CTIAGI-PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 277 MEVFGVSSCRVTRCGYTGEDGVEISVPAAGAVRLATALLENSEVKLAGLAARDSL 331
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 70/109 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA++I Q+K V R+R G T G P+R I + +G +TSGCP
Sbjct: 360 GKRRRAAMDFPGAAVIVPQLKGKVQRRRVGLTCEGAPMRAHSPILSTEGTVIGTVTSGCP 419
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 420 SPCLKKNVAMGYVPSEYSRPGTQLLVEVRRKQQMAVVSKMPFVPTNYYT 468
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
+++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS + G+ C
Sbjct: 230 LQNMGSDVGLEVM---DNALLALQGPTAAQVLQAGVTDDLRKLPFMTSAVMEVFGVSSCR 286
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 287 VTRCGYTGEDGVEISVPAAGAVRLATALLENSEVKLAGLAARDSL 331
>gi|344275810|ref|XP_003409704.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1
[Loxodonta africana]
Length = 403
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 158/237 (66%), Gaps = 5/237 (2%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A +RTPLYDLHL+HGGKMV FAG+S+PVQY I SHLHTR S+FDVSHMLQT +
Sbjct: 32 ALRRTPLYDLHLAHGGKMVAFAGWSLPVQYRDSHID-SHLHTRQHCSLFDVSHMLQTKIF 90
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIV T E L++VSNA
Sbjct: 91 GCDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVINTSEGHLYVVSNAGCWD 150
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
D+ LM +++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 151 KDLALMQDKVRELQNMGNDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRKLPFMTS 207
Query: 375 RPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 208 AVMEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLAMALLENPEVKLAGLAARDSL 264
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 67/109 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I + +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAEVIVPQLKGKVQRRRVGLMCEGPPMRAHSPILSTEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G + V VR KR V+KMPFV + YYT
Sbjct: 353 SPSLKKNVAMGYVPSQYSQPGTLVLVEVRRKRQAAVVSKMPFVPTTYYT 401
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNMGNDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLAMALLENPEVKLAGLAARDSL 264
>gi|321461805|gb|EFX72833.1| hypothetical protein DAPPUDRAFT_308047 [Daphnia pulex]
Length = 403
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 132/266 (49%), Positives = 173/266 (65%), Gaps = 11/266 (4%)
Query: 173 FLKFLSFFSGLTFVFSP-----GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAV 227
LK S ++ T F+P SS +A ++T LYDL++ + GKMV FAG+ MPVQYG+
Sbjct: 1 MLKIASQYNN-TLKFTPLICRSFSSENAPKKTCLYDLNVKYQGKMVDFAGYLMPVQYGSE 59
Query: 228 SITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQ 287
I ASH HTRS S+FDVSHMLQ+ + GK ++LES+ V D+ L GTLS+FT +
Sbjct: 60 GIQASHKHTRSHCSLFDVSHMLQSNIHGKDNVKFLESLMVGDIQSLPNNHGTLSVFTTDS 119
Query: 288 GGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLI 347
GGI DD IV KT L++VSNA R D+ L+ + K G D+ ++ L +ERGL+
Sbjct: 120 GGIIDDFIVNKTSLGYLYVVSNAGCRDKDLALLNSKLALAKKEGLDVDIEVL--KERGLL 177
Query: 348 AVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQC 406
A+QGPL +ILQ + D+ L LYFMT+ T+ G+P C +TR GYTGEDGVE+SVP
Sbjct: 178 AIQGPLMMSILQPNVDIPLDQLYFMTTSVATVCGVPNCRITRCGYTGEDGVEVSVPPSAA 237
Query: 407 THIVEALL--SDEDVKLAGLGARDSL 430
IV+ LL S +KLAGLGARDSL
Sbjct: 238 ADIVDKLLESSKGALKLAGLGARDSL 263
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 73/106 (68%), Gaps = 5/106 (4%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTL 511
K G D+ ++ L +ERGL+A+QGPL +ILQ + D+ L LYFMT+ T+ G+P C +
Sbjct: 160 KKEGLDVDIEVL--KERGLLAIQGPLMMSILQPNVDIPLDQLYFMTTSVATVCGVPNCRI 217
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDGVE+SVP IV+ LL S +KLAGLGARDSL
Sbjct: 218 TRCGYTGEDGVEVSVPPSAAADIVDKLLESSKGALKLAGLGARDSL 263
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I + L KRRR FPGA+ I +++KS R+R GF S G P R I++ +
Sbjct: 283 IEASLAWLVAKRRRAAADFPGAANILAELKSTTGRRRVGFVSRGPPARGHTPIYSKDGNL 342
Query: 63 VGAITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G ITSGCPSPSL N++MG+++ Y K G ++ +R K VD +VTKMPFV + YY
Sbjct: 343 IGEITSGCPSPSLPGVNVSMGHLDRQYVKSGTQVQFEIRKKMVDAQVTKMPFVPTKYY 400
>gi|341891053|gb|EGT46988.1| hypothetical protein CAEBREN_09331 [Caenorhabditis brenneri]
Length = 403
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 168/247 (68%), Gaps = 6/247 (2%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
FS S SA+Q T L + H HGGK+V FAG+ MP QYG +SI S +HTR VS+FDVS
Sbjct: 17 FSRTSEVSAKQ-TCLIETHKKHGGKLVEFAGYDMPTQYGDLSIKESTIHTRKHVSLFDVS 75
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
HMLQT +TG R ++ES+ ADV L+ GTLS+FTNE+GGI+DDLI+ KT +D LFL
Sbjct: 76 HMLQTHITGADRVAFIESLTTADVQGLNENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFL 135
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
V+NA D+ + ++S GKD++++ L + RGL+AVQGP + +LQ TD+DL
Sbjct: 136 VTNAGCIDKDLPYLQENAAAWRSKGKDVNIETL--DNRGLVAVQGPEMAKVLQEGTDIDL 193
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAG 423
S L FM + T+ GI C +TR GYTGEDGVEISV + +VE LL+ + VKLAG
Sbjct: 194 SKLTFMKTTVGTVFGIDGCRVTRCGYTGEDGVEISVDPTKAESLVEKLLASQAGKVKLAG 253
Query: 424 LGARDSL 430
LGARD+L
Sbjct: 254 LGARDAL 260
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%), Gaps = 5/107 (4%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
++S GKD++++ L + RGL+AVQGP + +LQ TD+DLS L FM + T+ GI C
Sbjct: 156 WRSKGKDVNIETL--DNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMKTTVGTVFGIDGCR 213
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEISV + +VE LL+ + VKLAGLGARD+L
Sbjct: 214 VTRCGYTGEDGVEISVDPTKAESLVEKLLASQAGKVKLAGLGARDAL 260
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKS-GVSRKRTGFTST-GVPIRPGYEIFNAND 60
I + L KRRRET FPGA I Q+K ++R G + G R + + D
Sbjct: 280 IEAGLAFVVAKRRRETLDFPGAEKIVKQLKEKSWPKRRVGLLAQPGRCPRSHLPLIDPLD 339
Query: 61 Q-RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +G +TSGCPSP+L KNIA+ Y++ ++SK G + V K+ V+V KMPFV ++YY
Sbjct: 340 KCAIGFVTSGCPSPTLGKNIAIAYVDKSHSKEGTKFIVDFGAKQAPVEVVKMPFVPTHYY 399
Query: 120 TPPK 123
T K
Sbjct: 400 TGKK 403
>gi|383854840|ref|XP_003702928.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Megachile
rotundata]
Length = 470
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 167/244 (68%), Gaps = 2/244 (0%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
FS +P+ ++T LYDLH+ + GK+V F+G+ +PVQY +I ASH HTR+ S+FDVS
Sbjct: 89 FSITQAPNP-RKTSLYDLHVENRGKIVNFSGWLLPVQYRE-AIAASHQHTRTFASLFDVS 146
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
HM+QT V+G+ ++LES+ +D+ L G L++FTNE GGI DDLI+TK E+S F+
Sbjct: 147 HMMQTRVSGRDAGDFLESLSTSDLKNLQKGSAVLTVFTNENGGIVDDLIITKDDENSFFV 206
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
VSNA RR+ D DL++ Q+ FK+ K ++L+FL EE+ L+A+QGP +++ LQ ++L
Sbjct: 207 VSNAGRREEDSDLLLQRQEEFKAEKKSVYLEFLDPEEQTLVALQGPTAASALQSMLQINL 266
Query: 367 SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
+L FM S + G +TR GYTGEDG EIS+P E +V+ +L + KLAGLGA
Sbjct: 267 QNLRFMNSVETELLGNQVRVTRCGYTGEDGFEISMPSEIACKLVQKILETPNTKLAGLGA 326
Query: 427 RDSL 430
RDSL
Sbjct: 327 RDSL 330
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTST-GVPIRPGYEIFNANDQRVGAITSGC 70
KRRR FPGA I SQIKSG +KR G + G P R G I +RVG ITSG
Sbjct: 359 AKRRRAEANFPGAQKILSQIKSGSDKKRVGLSIVHGPPAREGASILTPEGERVGKITSGG 418
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
PSP+L +++AMGY+ ++ G + V VR K VTKMPFVK+NYY
Sbjct: 419 PSPTLGRSVAMGYVPTELAQYGRGVLVEVRGKTYKATVTKMPFVKTNYYN 468
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 70/107 (65%)
Query: 449 NDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP 508
+ FK+ K ++L+FL PEE+ L+A+QGP +++ LQ ++L +L FM S + G
Sbjct: 224 QEEFKAEKKSVYLEFLDPEEQTLVALQGPTAASALQSMLQINLQNLRFMNSVETELLGNQ 283
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDG EIS+P E +V+ +L + KLAGLGARDSL
Sbjct: 284 VRVTRCGYTGEDGFEISMPSEIACKLVQKILETPNTKLAGLGARDSL 330
>gi|391327332|ref|XP_003738157.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Metaseiulus
occidentalis]
Length = 399
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 162/236 (68%), Gaps = 9/236 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
QRTPLYD H+ HGGKMVPFAG+SMPVQY + SI SH H R V++FDVSHMLQ+ + G
Sbjct: 33 QRTPLYDFHVKHGGKMVPFAGYSMPVQYSSQSIADSHKHCRQHVTIFDVSHMLQSKLHGP 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+R ++ES+ VAD+ L G+L+++T GGI DDLIV+ T D L++VSNA + D
Sbjct: 93 NRVSFMESLVVADIKGLKTNTGSLTVYTTPSGGIIDDLIVSST-PDYLYIVSNAGCAEKD 151
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A ++ S KD+ L+ + E+ LIAVQGP + +L D+++L FM +
Sbjct: 152 L----AHVNKELSSWKDVELEVI--EDHALIAVQGPSAHRLLSEVASCDMNALKFMNTTL 205
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 430
C +AG+PC +TR GYTGEDGVEIS+P + +VEALL+ D DVK+AGLGARD+L
Sbjct: 206 CDVAGVPCRVTRCGYTGEDGVEISIPEAKAEQVVEALLASKDVDVKMAGLGARDTL 261
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGC 70
KRRR+ GGFPG +I + R+R G +G P R G EI + + VG +TSG
Sbjct: 290 AKRRRQEGGFPGHDVIMKHLTLKPQRRRVGLLLESGAPARHGSEILDTSSSAVGQVTSGG 349
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSPSL KNIAMGY+ SKVG EL V+VR K + V KMPFV ++YY
Sbjct: 350 PSPSLAKNIAMGYVPTKLSKVGTELTVKVRSKLLKATVVKMPFVNTHYY 398
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 457 KDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 516
KD+ L+ + E+ LIAVQGP + +L D+++L FM + C +AG+PC +TR GY
Sbjct: 163 KDVELEVI--EDHALIAVQGPSAHRLLSEVASCDMNALKFMNTTLCDVAGVPCRVTRCGY 220
Query: 517 TGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 555
TGEDGVEIS+P + +VEALL+ D DVK+AGLGARD+L
Sbjct: 221 TGEDGVEISIPEAKAEQVVEALLASKDVDVKMAGLGARDTL 261
>gi|354476377|ref|XP_003500401.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1
[Cricetulus griseus]
Length = 403
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 156/235 (66%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKIFGH 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ESI V D+ EL P +G LSLFTNE GGI DDLIVT T E L++VSNA D
Sbjct: 93 DRVKLMESIVVGDIAELKPNQGILSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM F++ G D+ L+ + + L+A+QGP ++ +LQ DL + FMTS
Sbjct: 153 LALMQDKVKEFQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRKMPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAIAAVHLATALLKNPEVKLAGLAARDSL 264
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 70/109 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA II Q+K V ++R G G P+R I + +GA+TSGCP
Sbjct: 293 GKRRRTAMDFPGAKIIVPQLKGEVQKRRVGLVCEGAPVRAHSPILSTEGTVIGAVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYYT 401
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ F++ G D+ L+ + + L+A+QGP ++ +LQ DL + FMTS
Sbjct: 153 LALMQDKVKEFQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRKMPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAIAAVHLATALLKNPEVKLAGLAARDSL 264
>gi|344252834|gb|EGW08938.1| Aminomethyltransferase, mitochondrial [Cricetulus griseus]
Length = 409
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 156/235 (66%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 40 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKIFGH 98
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ESI V D+ EL P +G LSLFTNE GGI DDLIVT T E L++VSNA D
Sbjct: 99 DRVKLMESIVVGDIAELKPNQGILSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWDKD 158
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM F++ G D+ L+ + + L+A+QGP ++ +LQ DL + FMTS
Sbjct: 159 LALMQDKVKEFQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRKMPFMTSAV 215
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 216 MEVFGVSGCRVTRCGYTGEDGVEISVPAIAAVHLATALLKNPEVKLAGLAARDSL 270
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 70/109 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA II Q+K V ++R G G P+R I + +GA+TSGCP
Sbjct: 299 GKRRRTAMDFPGAKIIVPQLKGEVQKRRVGLVCEGAPVRAHSPILSTEGTVIGAVTSGCP 358
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 359 SPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYYT 407
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ F++ G D+ L+ + + L+A+QGP ++ +LQ DL + FMTS
Sbjct: 159 LALMQDKVKEFQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRKMPFMTSAV 215
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 216 MEVFGVSGCRVTRCGYTGEDGVEISVPAIAAVHLATALLKNPEVKLAGLAARDSL 270
>gi|17560118|ref|NP_504502.1| Protein GCST-1 [Caenorhabditis elegans]
gi|351057896|emb|CCD64504.1| Protein GCST-1 [Caenorhabditis elegans]
Length = 402
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 202/335 (60%), Gaps = 25/335 (7%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
FS + SA+Q T L + H HGGK+V FAG+ MP QY SI S +HTR VS+FDVS
Sbjct: 17 FSRTAEASAKQ-TCLIETHKKHGGKLVEFAGYDMPTQYADFSIKESTIHTRKHVSLFDVS 75
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
HMLQT +TGK R ++ES+ ADV L GTLS+FTNE+GGI+DDLI+ KT +D LFL
Sbjct: 76 HMLQTYITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFL 135
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
V+NA + D+ + ++S GKD+ ++ L + RGL+AVQGP + +LQ TD+DL
Sbjct: 136 VTNAGCIEKDLPYLQENAAAWRSKGKDVKIETL--DNRGLVAVQGPEMAKVLQEGTDIDL 193
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAG 423
S L FM + + GI C +TR GYTGEDGVEISV + +VE LL+ + VKLAG
Sbjct: 194 SKLTFMKTTVGKVFGIDGCRVTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGSVKLAG 253
Query: 424 LGARDSL---------SGDITLN-TPVPHG-SLKLSNDRFKSL---GKDIHLQFLS---- 465
LGARD+L DI N TP+ G + ++ R ++L G + ++ L
Sbjct: 254 LGARDALRLEAGLCLYGSDIEENTTPIEAGLAFVVAKRRRETLDFPGAEHIVKQLKEKSW 313
Query: 466 PEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTS 499
P+ R GL+A G + L LD S+ F+TS
Sbjct: 314 PKRRVGLLAPAGRCPRSHLPLIDPLDKCSIGFVTS 348
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
++S GKD+ ++ L + RGL+AVQGP + +LQ TD+DLS L FM + + GI C
Sbjct: 156 WRSKGKDVKIETL--DNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMKTTVGKVFGIDGCR 213
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEISV + +VE LL+ + VKLAGLGARD+L
Sbjct: 214 VTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGSVKLAGLGARDAL 260
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKS-GVSRKRTGFTS-TGVPIRPGYEIFNAND 60
I + L KRRRET FPGA I Q+K ++R G + G R + + D
Sbjct: 280 IEAGLAFVVAKRRRETLDFPGAEHIVKQLKEKSWPKRRVGLLAPAGRCPRSHLPLIDPLD 339
Query: 61 Q-RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +G +TSGCPSP+L KNIA+ Y++ ++SK+G + V K+ V+V KMPFV +NY+
Sbjct: 340 KCSIGFVTSGCPSPTLGKNIAIAYVDKSHSKIGTKFVVDFGAKQAPVEVVKMPFVPTNYF 399
Query: 120 T 120
T
Sbjct: 400 T 400
>gi|351711887|gb|EHB14806.1| Aminomethyltransferase, mitochondrial [Heterocephalus glaber]
Length = 403
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 156/235 (66%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGG+MV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGRMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKIFGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA D
Sbjct: 93 DRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTNTSEGYLYVVSNAGCWDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM +S G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQSRGSDVSLEVV---DNALLALQGPAAAQVLQAGVAEDLKKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHVAMALLQNPEVKLAGLAARDSL 264
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 68/109 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR T FPGA++I Q+K V R+R G G P+R I +G +TSGCP
Sbjct: 293 GKRRRVTMDFPGATVIVPQLKGKVERRRVGLMCEGAPMRAHSLILCTEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYY
Sbjct: 353 SPCLKKNVAMGYVPSKYSRPGTQLLVEVRRKQQMAIVSKMPFVPTNYYA 401
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQSRGSDVSLEVV---DNALLALQGPAAAQVLQAGVAEDLKKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHVAMALLQNPEVKLAGLAARDSL 264
>gi|308501188|ref|XP_003112779.1| hypothetical protein CRE_30811 [Caenorhabditis remanei]
gi|308267347|gb|EFP11300.1| hypothetical protein CRE_30811 [Caenorhabditis remanei]
Length = 403
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/338 (44%), Positives = 204/338 (60%), Gaps = 25/338 (7%)
Query: 184 TFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVF 243
T FS S S +Q T L + H HGGK+V FAG+ MP QY +SI S +HTR VS+F
Sbjct: 14 TRCFSRTSEVSGKQ-TCLIETHKKHGGKLVEFAGYDMPTQYADLSIKESTIHTRKHVSLF 72
Query: 244 DVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS 303
DVSHMLQT +TGK R ++ES+ ADV L GTLS+FTN++GGI+DDLI+ KT +D
Sbjct: 73 DVSHMLQTHITGKDRVAFIESLTTADVQGLQENSGTLSVFTNDKGGIKDDLIIMKTDKDF 132
Query: 304 LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD 363
LFLV+NA D+ ++ ++S GKD+ ++ L + RGL+AVQGP + +LQ T+
Sbjct: 133 LFLVTNAGCIDKDLPYLLENAAAWRSKGKDVKIETL--DNRGLVAVQGPEMAKVLQEGTE 190
Query: 364 LDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVK 420
+DLS L FM + T+ GI C +TR GYTGEDGVEISV + +VE LL+ + VK
Sbjct: 191 IDLSKLTFMKTIVGTVFGIEGCRVTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGKVK 250
Query: 421 LAGLGARDSL---------SGDITLN-TPVPHG-SLKLSNDRFKSL---GKDIHLQFLS- 465
LAGLGARD+L DI N TP+ G + ++ R ++L G + ++ L
Sbjct: 251 LAGLGARDALRLEAGLCLYGSDIDENTTPIEAGLAFVVAKRRRETLDFPGAEKIVKQLKE 310
Query: 466 ---PEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTS 499
P+ R GLIA G + L LD +L F+TS
Sbjct: 311 KSWPKRRVGLIAPAGRCPRSHLPLIDPLDKCALGFVTS 348
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
++S GKD+ ++ L + RGL+AVQGP + +LQ T++DLS L FM + T+ GI C
Sbjct: 156 WRSKGKDVKIETL--DNRGLVAVQGPEMAKVLQEGTEIDLSKLTFMKTIVGTVFGIEGCR 213
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEISV + +VE LL+ + VKLAGLGARD+L
Sbjct: 214 VTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGKVKLAGLGARDAL 260
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKS-GVSRKRTGFTS-TGVPIRPGYEIFNAND 60
I + L KRRRET FPGA I Q+K ++R G + G R + + D
Sbjct: 280 IEAGLAFVVAKRRRETLDFPGAEKIVKQLKEKSWPKRRVGLIAPAGRCPRSHLPLIDPLD 339
Query: 61 Q-RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +G +TSGCPSP+L KNIA+ Y++ ++SK G + V K+ V+V KMPFV +NYY
Sbjct: 340 KCALGFVTSGCPSPTLGKNIAIAYVDKSHSKEGTKFIVDFGAKQAPVEVVKMPFVPTNYY 399
Query: 120 TPPK 123
T K
Sbjct: 400 TGKK 403
>gi|307202909|gb|EFN82129.1| Aminomethyltransferase, mitochondrial [Harpegnathos saltator]
Length = 454
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 156/234 (66%), Gaps = 1/234 (0%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH+ GK+V FAG+ +PVQY +I ASH HTRS S+FDV HM+QT + GK
Sbjct: 82 RKTCLYDLHVEKQGKVVNFAGWLLPVQYRE-AIAASHQHTRSYASLFDVGHMMQTHIIGK 140
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+LES+ D+ L G TL++FTN+ GGI DDLIVTK ED F+VSNA+RR D
Sbjct: 141 DAGEYLESLTTCDLKNLKNGAATLTVFTNDMGGILDDLIVTKDDEDKYFVVSNAARRNED 200
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
L++ Q+ FK GK++ + FL ++GL+A+QGP ++ LQ +DL +L FM S
Sbjct: 201 SQLLLERQEDFKRTGKNVRIDFLDPLQQGLVALQGPTAAAALQSLVKIDLQTLKFMNSVK 260
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG ++R GYTGEDG EISV + ++VE +L VKLAGLGARDSL
Sbjct: 261 TEVAGSQVRISRCGYTGEDGFEISVLAKDAVNLVERILEISHVKLAGLGARDSL 314
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 68/104 (65%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK GK++ + FL P ++GL+A+QGP ++ LQ +DL +L FM S +AG +
Sbjct: 211 FKRTGKNVRIDFLDPLQQGLVALQGPTAAAALQSLVKIDLQTLKFMNSVKTEVAGSQVRI 270
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R GYTGEDG EISV + ++VE +L VKLAGLGARDSL
Sbjct: 271 SRCGYTGEDGFEISVLAKDAVNLVERILEISHVKLAGLGARDSL 314
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQ 61
+ + L KRRR FPGA I SQIK+G + KR G G P R G I +
Sbjct: 334 VEAALTWLIAKRRRVEANFPGAQRILSQIKTGAAEKRVGLLLGQGPPARQGAPILTPEGE 393
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
RVG +TSG PSP+L + IAMGY+ ++ G + + VR K VTKMPFVK+NYYT
Sbjct: 394 RVGKVTSGGPSPTLGRPIAMGYVPSDLAQFGGGVLIEVRGKTYKATVTKMPFVKTNYYT 452
>gi|322797540|gb|EFZ19584.1| hypothetical protein SINV_05762 [Solenopsis invicta]
Length = 444
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
Query: 211 KMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADV 270
K++ FAG+ +PVQY +I SHLHTRS S+FDV HMLQT V GK E+LES+ D+
Sbjct: 86 KVINFAGWLLPVQYRE-AIAVSHLHTRSLASLFDVGHMLQTRVFGKDAGEYLESLTTCDL 144
Query: 271 HELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSL 330
L G TL++FTN++GGI DDLI+TK ED F+VSNA RR D L++ QD FK +
Sbjct: 145 KNLSKGAATLTVFTNDKGGILDDLIITKDDEDKYFVVSNAGRRDEDSQLLLERQDDFKRI 204
Query: 331 GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 390
GK++H+ FL E+GLIA+QGP ++T+LQ +DL +L FM S ++G ++R G
Sbjct: 205 GKNVHVDFLDPLEQGLIALQGPTAATVLQSLVKIDLQTLKFMNSVETEVSGSNIRISRCG 264
Query: 391 YTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
YTGEDG EISVP ++VE +L DVKLAGLGARDSL
Sbjct: 265 YTGEDGFEISVPANDAINLVERILEIPDVKLAGLGARDSL 304
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 74/107 (69%)
Query: 449 NDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP 508
D FK +GK++H+ FL P E+GLIA+QGP ++T+LQ +DL +L FM S ++G
Sbjct: 198 QDDFKRIGKNVHVDFLDPLEQGLIALQGPTAATVLQSLVKIDLQTLKFMNSVETEVSGSN 257
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
++R GYTGEDG EISVP ++VE +L DVKLAGLGARDSL
Sbjct: 258 IRISRCGYTGEDGFEISVPANDAINLVERILEIPDVKLAGLGARDSL 304
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQ 61
I + L KRRR FPGA I SQIK+G ++KR G G P R G I +
Sbjct: 324 IEAALTWLVAKRRRAEANFPGAERILSQIKTGPTKKRVGLLLGQGPPAREGAPILTPEGE 383
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
RVG++TSG PSP+L + IAMGY+ P ++ G + V VR K VTKMPFVK+ YYT
Sbjct: 384 RVGSVTSGGPSPTLGRPIAMGYMPPDLAQFGGGILVEVRGKTYKGTVTKMPFVKAKYYT 442
>gi|268557774|ref|XP_002636877.1| Hypothetical protein CBG09336 [Caenorhabditis briggsae]
Length = 402
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 168/250 (67%), Gaps = 6/250 (2%)
Query: 184 TFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVF 243
T FS + S +Q T L + H HGGK+V FAG+ MP QYG +SI S +HTR VS+F
Sbjct: 14 TRCFSRTTEVSGKQ-TCLIETHKKHGGKLVEFAGYDMPTQYGDLSIKESTIHTRKHVSLF 72
Query: 244 DVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS 303
DVSHMLQT +TGK R ++ES+ ADV L GTLS+FTNE+GGI+DDLI+ KT +D
Sbjct: 73 DVSHMLQTHITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDF 132
Query: 304 LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD 363
LFLV+NA D+ ++ +++ GKD+ ++ L + RGL+AVQGP + +LQ TD
Sbjct: 133 LFLVTNAGCIDKDLPYLLENAAAWRAKGKDVKIETL--DNRGLVAVQGPEMAKVLQEGTD 190
Query: 364 LDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVK 420
+DLS L FM + ++ GI C +TR GYTGEDGVEISV + +V+ LL+ + VK
Sbjct: 191 IDLSKLTFMKTTVGSVFGIDGCRVTRCGYTGEDGVEISVDPTKAEQLVDRLLASQAGKVK 250
Query: 421 LAGLGARDSL 430
LAGLGARD+L
Sbjct: 251 LAGLGARDAL 260
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
+++ GKD+ ++ L + RGL+AVQGP + +LQ TD+DLS L FM + ++ GI C
Sbjct: 156 WRAKGKDVKIETL--DNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMKTTVGSVFGIDGCR 213
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEISV + +V+ LL+ + VKLAGLGARD+L
Sbjct: 214 VTRCGYTGEDGVEISVDPTKAEQLVDRLLASQAGKVKLAGLGARDAL 260
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKS-GVSRKRTGFTST-GVPIRPGYEIFNAND 60
I + L KRRRET FPGA I Q+K ++R G + G R + + D
Sbjct: 280 IEAGLAFVVAKRRRETLDFPGAEKIVKQLKEKSWPKRRVGLLAQPGRCPRSHLPLIDPLD 339
Query: 61 Q-RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +G +TSGCPSP+L KNIA+ Y++ ++SK G + V K+ V+V KMPFV ++YY
Sbjct: 340 KCAIGFVTSGCPSPTLGKNIAIAYVDKSHSKEGTKFIVDFGAKQAPVEVVKMPFVPTHYY 399
Query: 120 T 120
T
Sbjct: 400 T 400
>gi|332031409|gb|EGI70922.1| Aminomethyltransferase, mitochondrial [Acromyrmex echinatior]
Length = 360
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 150/221 (67%), Gaps = 1/221 (0%)
Query: 210 GKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVAD 269
GK+V FAG+ +PVQY +I SHLHTRS S+FDV HMLQT V+GK E+LES+ D
Sbjct: 1 GKIVNFAGWLLPVQYQE-AIAVSHLHTRSLASLFDVGHMLQTCVSGKDTGEYLESLTTCD 59
Query: 270 VHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKS 329
+ L G TL++FTN++GGI DDLI+TK ED F+VSNA RR D L++ QD FK
Sbjct: 60 LKNLSRGAATLTVFTNDKGGILDDLIITKDDEDKYFVVSNAGRRDEDSRLLLERQDDFKK 119
Query: 330 LGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 389
+GKD+++ FL E+GLIA+QGP + T+L +DL SL FM S ++G ++R
Sbjct: 120 IGKDVYIDFLDPLEQGLIALQGPTAETVLHSLVKIDLRSLKFMNSVKTEVSGSRIRISRC 179
Query: 390 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
GYTGEDG EISVP ++VE +L VKLAGLGARDSL
Sbjct: 180 GYTGEDGFEISVPANDAINLVERILEIPGVKLAGLGARDSL 220
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 71/107 (66%)
Query: 449 NDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP 508
D FK +GKD+++ FL P E+GLIA+QGP + T+L +DL SL FM S ++G
Sbjct: 114 QDDFKKIGKDVYIDFLDPLEQGLIALQGPTAETVLHSLVKIDLRSLKFMNSVKTEVSGSR 173
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
++R GYTGEDG EISVP ++VE +L VKLAGLGARDSL
Sbjct: 174 IRISRCGYTGEDGFEISVPANDAINLVERILEIPGVKLAGLGARDSL 220
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQ 61
I + L KRRR FPGA I SQIK+G ++KR G G P R G I +
Sbjct: 240 IEAALTWLVAKRRRVEANFPGAQRILSQIKTGTTKKRVGLLLGQGPPAREGAPILTPEGE 299
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
RVG++TSG PSP+L + IAMGY+ P ++ G + V VR K VT+MPFVK+ YYT
Sbjct: 300 RVGSVTSGGPSPTLGRPIAMGYMPPDLAQYGGGILVEVRGKTYKGTVTRMPFVKAKYYT 358
>gi|149728657|ref|XP_001497736.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 1 [Equus
caballus]
Length = 403
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 155/235 (65%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRQHCSLFDVSHMLQTKIFGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA D
Sbjct: 93 DRVRLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM +++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNIGSDVGLEVV---DNALLALQGPTAAQVLQAGVADDLKKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAVGAVRLATALLENPEVKLAGLAARDSL 264
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 67/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA++I Q+K V R+R G G P+R I + +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGATVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILSTEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYY
Sbjct: 353 SPCLKKNVAMGYVPCEYSRPGTPLLVEVRQKQQMAVVSKMPFVPTNYY 400
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNIGSDVGLEVV---DNALLALQGPTAAQVLQAGVADDLKKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAVGAVRLATALLENPEVKLAGLAARDSL 264
>gi|346465031|gb|AEO32360.1| hypothetical protein [Amblyomma maculatum]
Length = 362
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 165/243 (67%), Gaps = 6/243 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS A QRT LYD H+ HGGKMVPFAG++MPVQY ++ ++ASHLHTR S+FDVSHMLQ
Sbjct: 29 SSDQALQRTALYDFHVKHGGKMVPFAGYAMPVQYSSLGLSASHLHTRRHASLFDVSHMLQ 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ V G R ++ES+ V+D+ L GTL+++TNE+GGI DDLIV KT +D L++VSNA
Sbjct: 89 SKVHGPDRVRFVESLVVSDIEGLADDSGTLTVYTNEKGGIIDDLIVNKT-KDFLYVVSNA 147
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + + F+S G L+ + + L+A+QGP ++ +LQ + L+SL+
Sbjct: 148 GCRDKDLAHVKTKLEAFQSSGGQATLELM--DSWSLLAIQGPAAAELLQPLVNCTLASLH 205
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED--VKLAGLGAR 427
FM T+ GIP C +TR GYTGEDG E+SVP + T + E +LS ++LAGLGAR
Sbjct: 206 FMRGATVTLGGIPGCRITRCGYTGEDGFELSVPSTEVTSLAEEMLSRSSGRLQLAGLGAR 265
Query: 428 DSL 430
DSL
Sbjct: 266 DSL 268
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 5/114 (4%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 504
+K + F+S G L+ + + L+A+QGP ++ +LQ + L+SL+FM T+
Sbjct: 157 VKTKLEAFQSSGGQATLELM--DSWSLLAIQGPAAAELLQPLVNCTLASLHFMRGATVTL 214
Query: 505 AGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED--VKLAGLGARDSL 555
GIP C +TR GYTGEDG E+SVP + T + E +LS ++LAGLGARDSL
Sbjct: 215 GGIPGCRITRCGYTGEDGFELSVPSTEVTSLAEEMLSRSSGRLQLAGLGARDSL 268
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNAN-DQRVGAITS 68
GKRRR+ FPGA +I Q+K SR+R G T+TG P R G ++++ Q++G +TS
Sbjct: 297 GKRRRQLADFPGAPVILEQLKQKPSRRRVGLVATTTGPPARCGAAVYDSTGSQKLGQVTS 356
Query: 69 GCPSPS 74
G PSPS
Sbjct: 357 GIPSPS 362
>gi|380022022|ref|XP_003694854.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Apis florea]
Length = 453
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 159/234 (67%), Gaps = 1/234 (0%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH+ + GK++ F+G+ +PVQY +I SHLHTR+ S+FDV HMLQT V GK
Sbjct: 81 RKTCLYDLHVENRGKIINFSGWLLPVQYQE-AIATSHLHTRTFASLFDVGHMLQTRVCGK 139
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++LES+ D+ L G L++FT+E GGI DDLIVTK ED FLVSNA RRK D
Sbjct: 140 DATQFLESLTTGDLKNLGNGCAVLTVFTDENGGILDDLIVTKDDEDKYFLVSNAGRRKED 199
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
L++ Q+ F + G+ +HL+FL ++ L+A+QGP ++++LQ D+DL +L FM S
Sbjct: 200 SRLLLQQQEIFLTQGRSVHLEFLDPLKQSLVALQGPTAASVLQSIVDVDLKNLRFMNSVE 259
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G +TR GYTGEDG EIS+P + +V+ +L+ D KLAGLGARDSL
Sbjct: 260 TEVLGSRIRITRCGYTGEDGFEISIPVQIAHTLVKTILNTPDTKLAGLGARDSL 313
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQ 61
I + L KRR+ FPGA I QI+SG +KR G T G P+R G I +
Sbjct: 333 IEAGLTWLIAKRRKAEANFPGAPRILLQIESGTKKKRVGITVVNGPPVRAGACILTPEGE 392
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
RVG ITSG PSP+L IAMGY+ P ++ G + V VR K KVTKMPFVK+NYYT
Sbjct: 393 RVGNITSGGPSPTLGSYIAMGYVPPELAEYGKGVLVEVRGKTYKAKVTKMPFVKTNYYT 451
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 71/104 (68%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
F + G+ +HL+FL P ++ L+A+QGP ++++LQ D+DL +L FM S + G +
Sbjct: 210 FLTQGRSVHLEFLDPLKQSLVALQGPTAASVLQSIVDVDLKNLRFMNSVETEVLGSRIRI 269
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TR GYTGEDG EIS+P + +V+ +L+ D KLAGLGARDSL
Sbjct: 270 TRCGYTGEDGFEISIPVQIAHTLVKTILNTPDTKLAGLGARDSL 313
>gi|225713952|gb|ACO12822.1| Aminomethyltransferase, mitochondrial precursor [Lepeophtheirus
salmonis]
Length = 391
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 159/241 (65%), Gaps = 6/241 (2%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
+AEQ +T LYD H+ GGKMV FAG+SMP+QY + I SH HTR K S+FDVSHM Q+
Sbjct: 15 TAEQVKKTCLYDFHIQKGGKMVEFAGYSMPMQYIDMGIGESHQHTRKKCSIFDVSHMQQS 74
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
V GK R +++ES+ D+ L G+L++FTNE+GGI DDLIV T D L+LV+NA
Sbjct: 75 KVYGKDRRQFIESLTTLDLKTLKEDSGSLTIFTNEKGGIVDDLIVMNTSLDFLYLVTNAG 134
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
++ D+ LM KS DI L+ ++ + LIA+QGP + Q HTD+DL L F
Sbjct: 135 CKEKDILLMKKKVLEMKSDNMDIELEIIN--DHALIAIQGPKMAEYFQPHTDVDLKKLKF 192
Query: 372 MTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALL-SDEDVKLAGLGARDS 429
M + T+ G+P C +TR GYTGEDGVE+S+P E +++ L S+ +KLAGLGARDS
Sbjct: 193 MQTSLGTVCGVPMCRITRCGYTGEDGVEVSIPNEHAEAVLQKLTNSNSSIKLAGLGARDS 252
Query: 430 L 430
L
Sbjct: 253 L 253
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Query: 13 KRRRETGGFPGASIIQSQI-KSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
K RR+ GGFPG SII +Q+ K KR G S G P R G EI ++ + ++G ITSGCP
Sbjct: 283 KSRRKEGGFPGHSIILNQLSKKDFQSKRIGLVSNGPPPRSGMEILDSKENQIGVITSGCP 342
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP+LK N+AMGYI + SK+G ++V+VR+K V+ ++KMPFVK NY+
Sbjct: 343 SPTLKHNVAMGYINKSMSKIGNTVYVKVRNKIVEATISKMPFVKCNYFN 391
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-C 509
KS DI L+ ++ + LIA+QGP + Q HTD+DL L FM + T+ G+P C
Sbjct: 149 EMKSDNMDIELEIIN--DHALIAIQGPKMAEYFQPHTDVDLKKLKFMQTSLGTVCGVPMC 206
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALL-SDEDVKLAGLGARDSL 555
+TR GYTGEDGVE+S+P E +++ L S+ +KLAGLGARDSL
Sbjct: 207 RITRCGYTGEDGVEVSIPNEHAEAVLQKLTNSNSSIKLAGLGARDSL 253
>gi|195033602|ref|XP_001988718.1| GH10422 [Drosophila grimshawi]
gi|193904718|gb|EDW03585.1| GH10422 [Drosophila grimshawi]
Length = 415
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 155/236 (65%), Gaps = 3/236 (1%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RT LYD H+ GK+V F G+++PVQY SI ASH +TR S+FDVSHMLQT V G
Sbjct: 37 RTALYDFHVRKSGKIVNFGGYALPVQYADQSIIASHNYTRRVGSIFDVSHMLQTYVRGSD 96
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LESI AD+ + PG G+L++FTNEQGGI DDLIV K + L++VSNA+ ++ D
Sbjct: 97 AAACLESISTADILGMLPGAGSLTVFTNEQGGILDDLIVNKVSDKELYVVSNAAMKQQDA 156
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSR 375
D+M +A FKS GKD+ ++FLS ++ LIAVQGP + L + L LYFM S
Sbjct: 157 DIMSSAVSFFKSQGKDVSIEFLSPVDQSLIAVQGPQVAQELAKLLSQPKSLDQLYFMRSG 216
Query: 376 PCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AGI +TR GYTGEDG EISVP + + EALL+ +KLAGLGARDSL
Sbjct: 217 IFELAGIKNVRITRCGYTGEDGFEISVPSTKVESLTEALLAAGQLKLAGLGARDSL 272
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNANDQRVGAITS 68
KRRR TG FPGA +I Q+K GV R+R G G P R G I++ Q VG +TS
Sbjct: 301 AKRRRSTGDFPGAQLILQQLKEGVQRRRIGLQMLGAKPPPARAGVTIYSGGKQ-VGQLTS 359
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
GCPSP+ +NIAMGY+ G +L ++VRDK + +VTKMPFVK+NYYT PK
Sbjct: 360 GCPSPTTGRNIAMGYVAEQLKAPGTQLELKVRDKFYEAEVTKMPFVKANYYTKPK 414
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTIAGIP- 508
FKS GKD+ ++FLSP ++ LIAVQGP + L + L LYFM S +AGI
Sbjct: 166 FKSQGKDVSIEFLSPVDQSLIAVQGPQVAQELAKLLSQPKSLDQLYFMRSGIFELAGIKN 225
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDG EISVP + + EALL+ +KLAGLGARDSL
Sbjct: 226 VRITRCGYTGEDGFEISVPSTKVESLTEALLAAGQLKLAGLGARDSL 272
>gi|348581466|ref|XP_003476498.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Cavia
porcellus]
Length = 296
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 159/238 (66%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGG+MV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGRMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKIFGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA D
Sbjct: 93 DRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTNTAEGYLYVVSNAGCWDKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LVLM---QDKVRELQNGGSDVGLEVV---DNALLALQGPTAAQVLQAGVAHDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDG+EISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGMEISVPVAGAVHMAMALLQNPEVKLAGLAARDSL 264
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LVLMQDKVRELQNGGSDVGLEVV---DNALLALQGPTAAQVLQAGVAHDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDG+EISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGMEISVPVAGAVHMAMALLQNPEVKLAGLAARDSL 264
>gi|260809869|ref|XP_002599727.1| hypothetical protein BRAFLDRAFT_247201 [Branchiostoma floridae]
gi|229285008|gb|EEN55739.1| hypothetical protein BRAFLDRAFT_247201 [Branchiostoma floridae]
Length = 379
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 162/237 (68%), Gaps = 5/237 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ H HGGKMV F G+SMPVQY I+ASHLHTR+ S+FDVSHM+Q+ + GK
Sbjct: 2 KKTPLYEFHKEHGGKMVDFTGWSMPVQYKD-GISASHLHTRTNASIFDVSHMVQSRIHGK 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+++ES+ V DV L +GTL+LFTN++GGI DDLIV+KT E L++V+NA + D
Sbjct: 61 DAVKFIESLTVGDVAGLQENQGTLTLFTNDRGGIMDDLIVSKTSEGFLYVVTNAGCAEKD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M + F++ G D ++ + E+ GL+A+QGP ++ LQ D DLS + FM S
Sbjct: 121 IAHMQSQCKEFQAQGHDAAVEVIQ-EQFGLLALQGPSAAAALQAGVDADLSRITFMCSAV 179
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 430
T+ G+P C +TR GYTGEDG E+S+P Q + ++LL E DVKLAGLG RDSL
Sbjct: 180 LTVFGVPGCRVTRCGYTGEDGFEVSIPVGQVVQVADSLLQVEAADVKLAGLGPRDSL 236
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYE----IFNA 58
+ + LL KRRR FPGA +I QIK SRKR G TS G P R Y I +
Sbjct: 256 VEATLLWTVAKRRRAESNFPGAGVILQQIKDKPSRKRVGITSKGPPARGKYTSGTTILSE 315
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +G +TSGCPSPSLKKN+AMGY++ A++K G L + VR K+V +V+KMPFV +NY
Sbjct: 316 DGASIGVVTSGCPSPSLKKNVAMGYVQTAFAKAGTPLKLDVRGKQVPAQVSKMPFVPANY 375
Query: 119 Y 119
Y
Sbjct: 376 Y 376
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-C 509
F++ G D ++ + E+ GL+A+QGP ++ LQ D DLS + FM S T+ G+P C
Sbjct: 130 EFQAQGHDAAVEVIQ-EQFGLLALQGPSAAAALQAGVDADLSRITFMCSAVLTVFGVPGC 188
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDG E+S+P Q + ++LL E DVKLAGLG RDSL
Sbjct: 189 RVTRCGYTGEDGFEVSIPVGQVVQVADSLLQVEAADVKLAGLGPRDSL 236
>gi|45382157|ref|NP_990119.1| aminomethyltransferase, mitochondrial precursor [Gallus gallus]
gi|417042|sp|P28337.2|GCST_CHICK RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|222868|dbj|BAA01937.1| T-protein [Gallus gallus]
Length = 392
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 155/241 (64%), Gaps = 5/241 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+P ++TPL LH + GG+MVPFAG+S+PVQYG + SHLHTR S+FDVSHMLQ
Sbjct: 17 SAPEGLKQTPLDALHRARGGRMVPFAGWSLPVQYGRGHLE-SHLHTRRHCSLFDVSHMLQ 75
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V G+ R +LES+ V D+ EL PG+GTL+L TNE+G I DDLIVT T ED L++VSNA
Sbjct: 76 TRVYGRDRVRFLESLVVGDIAELRPGQGTLTLLTNERGDIVDDLIVTNTAEDHLYVVSNA 135
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
D +M ++ G D+HL+ G VQGP + +LQ DL+ L
Sbjct: 136 GCADKDRAVMEGRAAELRAAGGDVHLEVSGQRAAG---VQGPSMAQVLQAGLPDDLTKLT 192
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FMTS T+ G+P C +TR GYTGEDGVEISVP + + E LL +V AGL ARDS
Sbjct: 193 FMTSTATTVFGVPGCRVTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDS 252
Query: 430 L 430
L
Sbjct: 253 L 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 74/117 (63%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
+ + LL GKRRR FPGA+II Q+K RKR G TS G P+RP I
Sbjct: 273 VEAGLLWTLGKRRRTAMDFPGAAIIMEQVKEKPKRKRVGLTSVGPPLRPPAAILGPEGTP 332
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSGCPSPSL KNIAMGY++ A+S+ G L V VR K+ VTKMPFV ++YY
Sbjct: 333 VGTVTSGCPSPSLGKNIAMGYVQAAHSRPGTTLTVEVRKKQHPALVTKMPFVPTHYY 389
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
++ G D+HL+ G VQGP + +LQ DL+ L FMTS T+ G+P C
Sbjct: 152 LRAAGGDVHLEVSGQRAAG---VQGPSMAQVLQAGLPDDLTKLTFMTSTATTVFGVPGCR 208
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + + E LL +V AGL ARDSL
Sbjct: 209 VTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDSL 253
>gi|350408926|ref|XP_003488556.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Bombus
impatiens]
Length = 459
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 179/299 (59%), Gaps = 19/299 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH+ + GK++ F+G+ +PVQY +I ASH HTR+ S+FDV HM+QT+V GK
Sbjct: 87 RKTCLYDLHVENRGKIINFSGWLLPVQYQE-AIAASHQHTRTFASLFDVGHMMQTLVFGK 145
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E LES+ D+ L G L++FTNE GGI DDLI+TK +D FLVSNA+RR D
Sbjct: 146 DATELLESLTTGDLKNLSKGSAILTVFTNENGGILDDLIITKDDDDKYFLVSNAARRNQD 205
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
L++ Q+ FK GK I L+FL E+ L+A+QGP ++++L+ ++L +L FM S
Sbjct: 206 SQLLLQQQENFKRQGKSIQLRFLDPLEQSLVALQGPTAASVLRSIVKINLKNLTFMNSVE 265
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITL 436
T+ G +TR GYTGEDG EIS+P + +VEA+L D KLAGLGARDSL + L
Sbjct: 266 TTVFGSRIRVTRCGYTGEDGFEISMPAKIARTLVEAILDTPDTKLAGLGARDSLRLEAGL 325
Query: 437 ----------NTPVPHGSLKLSNDRFKSLG-----KDIHLQFLSPEER---GLIAVQGP 477
TPV L R ++ G K I Q S E+ GL V GP
Sbjct: 326 CLYGHDIDEETTPVEAALTWLVAKRRRAEGNFPGAKRILSQIKSGTEKKRIGLTVVHGP 384
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 71/106 (66%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ FK GK I L+FL P E+ L+A+QGP ++++L+ ++L +L FM S T+ G
Sbjct: 214 ENFKRQGKSIQLRFLDPLEQSLVALQGPTAASVLRSIVKINLKNLTFMNSVETTVFGSRI 273
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDG EIS+P + +VEA+L D KLAGLGARDSL
Sbjct: 274 RVTRCGYTGEDGFEISMPAKIARTLVEAILDTPDTKLAGLGARDSL 319
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTST-GVPIRPGYEIFNANDQ 61
+ + L KRRR G FPGA I SQIKSG +KR G T G P+R G I +
Sbjct: 339 VEAALTWLVAKRRRAEGNFPGAKRILSQIKSGTEKKRIGLTVVHGPPVREGACILTPEGE 398
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
VG +TSG PSP+L ++IAMGY+ + G + V+VR K + K+PFVK+NYYT
Sbjct: 399 SVGKVTSGGPSPTLGRSIAMGYVPSELAHYGGGILVQVRGKTYKATIAKIPFVKTNYYT 457
>gi|10257510|gb|AAF68432.3|AF239167_1 glycine cleavage system T-protein [Sus scrofa]
Length = 239
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/232 (53%), Positives = 155/232 (66%), Gaps = 11/232 (4%)
Query: 203 DLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWL 262
D HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G R + +
Sbjct: 1 DFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRQHCSLFDVSHMLQTKIFGSDRVKMM 59
Query: 263 ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVA 322
ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA R+ D+ LM
Sbjct: 60 ESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCREKDLTLM-- 117
Query: 323 AQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 379
QDR + L G DI L+ + + L+A+QGP ++ +LQ DL L FMTS +
Sbjct: 118 -QDRVRELQNTGGDIGLEVM---DNALLALQGPTAAQVLQAGVTDDLRKLPFMTSAVMEV 173
Query: 380 AGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G+ C +TR GYTGEDGVEISVP + + ALL + +VKLAGL ARDSL
Sbjct: 174 FGVSGCRVTRCGYTGEDGVEISVPAAEAVRLATALLENPEVKLAGLAARDSL 225
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Query: 437 NTPVPHGSLKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSS 493
N L L DR + L G DI L+ + + L+A+QGP ++ +LQ DL
Sbjct: 106 NAGCREKDLTLMQDRVRELQNTGGDIGLEVM---DNALLALQGPTAAQVLQAGVTDDLRK 162
Query: 494 LYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 552
L FMTS + G+ C +TR GYTGEDGVEISVP + + ALL + +VKLAGL AR
Sbjct: 163 LPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVRLATALLENPEVKLAGLAAR 222
Query: 553 DSL 555
DSL
Sbjct: 223 DSL 225
>gi|340724164|ref|XP_003400454.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Bombus
terrestris]
Length = 455
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/298 (44%), Positives = 176/298 (59%), Gaps = 19/298 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LYDLH+ + GK++ F G+ +PVQY +I ASH HTR+ S+FDV HM+QT+V GK
Sbjct: 84 KTCLYDLHVENRGKIINFCGWLLPVQYQE-AIAASHQHTRTFASLFDVGHMMQTLVFGKD 142
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E LES+ +D+ L G L++FTNE GGI DDLI+TK + FLVSNA RR D
Sbjct: 143 ATELLESLTTSDLKNLSKGSAVLTVFTNENGGILDDLIITKDDDHKYFLVSNAGRRNQDS 202
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
L++ Q+ FK GK I LQFL E+ L+A+QGP ++++L+ ++L SL FM S
Sbjct: 203 QLLLQQQENFKRQGKSIQLQFLHPLEQSLVALQGPTAASVLRSIVKINLKSLTFMNSVET 262
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITL- 436
T+ G +TR GYTGEDG EIS+P + +VEA+L D KLAGLGARDSL + L
Sbjct: 263 TVFGSRIRITRCGYTGEDGFEISMPAKIARTLVEAILDTPDTKLAGLGARDSLRLEAGLC 322
Query: 437 ---------NTPVPHGSLKLSNDRFKSLG-----KDIHLQFLSPEER---GLIAVQGP 477
TPV L R ++ G K I Q S E+ GL V GP
Sbjct: 323 LYGHDIDEETTPVEAALTWLVAKRRRAEGNFPGAKRILSQIKSGTEKKRIGLTVVHGP 380
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 71/106 (66%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ FK GK I LQFL P E+ L+A+QGP ++++L+ ++L SL FM S T+ G
Sbjct: 210 ENFKRQGKSIQLQFLHPLEQSLVALQGPTAASVLRSIVKINLKSLTFMNSVETTVFGSRI 269
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDG EIS+P + +VEA+L D KLAGLGARDSL
Sbjct: 270 RITRCGYTGEDGFEISMPAKIARTLVEAILDTPDTKLAGLGARDSL 315
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTST-GVPIRPGYEIFNANDQ 61
+ + L KRRR G FPGA I SQIKSG +KR G T G P+R G I +
Sbjct: 335 VEAALTWLVAKRRRAEGNFPGAKRILSQIKSGTEKKRIGLTVVHGPPVREGACILTPEGE 394
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
VG +TSG PSP+L ++IAMGY+ + G + V+VR K + K+PFVK+NYYT
Sbjct: 395 SVGKVTSGGPSPTLGRSIAMGYVPSELAHYGGGILVQVRGKTYKATIAKIPFVKTNYYT 453
>gi|291393681|ref|XP_002713227.1| PREDICTED: aminomethyltransferase isoform 1 [Oryctolagus cuniculus]
Length = 403
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 152/235 (64%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
RTPLYD HL+HGGKMV FAG+S+PVQY + HLHTR S+FDVSHMLQT + G
Sbjct: 34 HRTPLYDFHLAHGGKMVAFAGWSLPVQYQDSHMDL-HLHTRQHCSLFDVSHMLQTKIFGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGYLYVVSNAGCWDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM ++ G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQNKVRELQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVAHDLRKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDG+EISVP + A L + +VKLAGL ARDSL
Sbjct: 210 MEVFGVAGCRVTRCGYTGEDGMEISVPAPGAVRLATAFLENPEVKLAGLAARDSL 264
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 68/109 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N R+G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAEVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNVEGTRIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPCLKKNVAMGYVPLEYSRPGTPLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L ++ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQNKVRELQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVAHDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDG+EISVP + A L + +VKLAGL ARDSL
Sbjct: 210 MEVFGVAGCRVTRCGYTGEDGMEISVPAPGAVRLATAFLENPEVKLAGLAARDSL 264
>gi|66523500|ref|XP_394029.2| PREDICTED: aminomethyltransferase, mitochondrial-like [Apis
mellifera]
Length = 455
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 159/234 (67%), Gaps = 1/234 (0%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH+ + GK+ F+G+ +PVQY +I SHLHTR+ S+FDV HMLQT V+G+
Sbjct: 83 RKTCLYDLHVENRGKITNFSGWLLPVQYQE-AIATSHLHTRTFASLFDVGHMLQTRVSGR 141
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++LES+ +D+ L G L++FT+E GGI DDLIVTK ED FLVSNA RRK D
Sbjct: 142 DATQFLESLTTSDLKNLGNGCAVLAVFTDENGGILDDLIVTKDGEDRYFLVSNAGRRKED 201
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
L++ Q+ F + GK + L+FL ++ L+A+QGP ++++LQ D+DL +L FM S
Sbjct: 202 SRLLLQQQEIFLTQGKSVSLEFLDPLKQSLVALQGPTAASVLQSIVDVDLRNLRFMNSVE 261
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G +TR GYTGEDG EIS+P + +V+ +L+ D KLAGLGARDSL
Sbjct: 262 TEVLGRRIRITRCGYTGEDGFEISIPVQIAHTLVKMILNTPDTKLAGLGARDSL 315
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGC 70
KRR+ FPGA+ I QI+SG +KR G T G P+R G I +RVG ITSG
Sbjct: 344 AKRRKAEANFPGAAKILLQIESGTKKKRVGITVVNGPPVRAGACILTPEGERVGNITSGG 403
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
PSP+L IAMGY+ P ++ G + V VR K KVTKMPFVK+NYYT
Sbjct: 404 PSPTLGSYIAMGYVPPELAEYGKGVLVEVRGKTYKAKVTKMPFVKTNYYT 453
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 70/104 (67%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
F + GK + L+FL P ++ L+A+QGP ++++LQ D+DL +L FM S + G +
Sbjct: 212 FLTQGKSVSLEFLDPLKQSLVALQGPTAASVLQSIVDVDLRNLRFMNSVETEVLGRRIRI 271
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TR GYTGEDG EIS+P + +V+ +L+ D KLAGLGARDSL
Sbjct: 272 TRCGYTGEDGFEISIPVQIAHTLVKMILNTPDTKLAGLGARDSL 315
>gi|29135267|ref|NP_803451.1| aminomethyltransferase, mitochondrial precursor [Bos taurus]
gi|121084|sp|P25285.1|GCST_BOVIN RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|163771|gb|AAA30786.1| T-protein [Bos taurus]
gi|296474756|tpg|DAA16871.1| TPA: aminomethyltransferase precursor [Bos taurus]
Length = 397
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 160/238 (67%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 28 HRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVN-SHLHTRQHCSLFDVSHMLQTKIFGC 86
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT E L++VSNA R+ D
Sbjct: 87 DRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTSASEGHLYVVSNAGCREKD 146
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMT
Sbjct: 147 LTLM---QDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 200
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 201 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLKNPEVKLAGLAARDSL 258
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 68/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I Q+KS R+R G G P+R I + +GA+TSGCP
Sbjct: 287 GKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCP 346
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYY
Sbjct: 347 SPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVSTNYY 394
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 147 LTLMQDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 203
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 204 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLKNPEVKLAGLAARDSL 258
>gi|77404199|ref|NP_001029165.1| aminomethyltransferase, mitochondrial precursor [Canis lupus
familiaris]
gi|11132475|sp|Q9TSZ7.1|GCST_CANFA RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|6562361|emb|CAB62567.1| glycine cleavage system T-protein [Canis lupus familiaris]
Length = 403
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 157/235 (66%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKILGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI+DDLIVT T E L++VSNA D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGIEDDLIVTSTSEGYLYVVSNAGCWDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM +++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQGKVRELQNMGSDVSLEVV---DNALLALQGPTATQVLQAGVADDLRKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAAAVRLAAALLENPEVKLAGLAARDSL 264
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 70/109 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I +Q+K V R+R G T G P+R I N +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGASVIIAQLKGKVQRRRVGLTCEGAPVRAHSPILNMEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYYT 401
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
+++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS + G+ C
Sbjct: 163 LQNMGSDVSLEVV---DNALLALQGPTATQVLQAGVADDLRKLPFMTSAVMEVFGVSGCR 219
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 220 VTRCGYTGEDGVEISVPAAAAVRLAAALLENPEVKLAGLAARDSL 264
>gi|301770371|ref|XP_002920589.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Ailuropoda
melanoleuca]
gi|281338347|gb|EFB13931.1| hypothetical protein PANDA_009348 [Ailuropoda melanoleuca]
Length = 403
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 160/238 (67%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKILGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA R D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTSTSEGYLYVVSNAGCRDKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNEGSDVSLEVV---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAAAVHLATALLENPEVKLAGLAARDSL 264
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I +Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRAAVDFPGASVIVAQLKGKVQRRRVGLMCEGAPMRAHSPILNTEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYYT 401
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNEGSDVSLEVV---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAAAVHLATALLENPEVKLAGLAARDSL 264
>gi|241092083|ref|XP_002409352.1| aminomethyl transferase, putative [Ixodes scapularis]
gi|215492706|gb|EEC02347.1| aminomethyl transferase, putative [Ixodes scapularis]
Length = 391
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 159/237 (67%), Gaps = 6/237 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
QRT LYD H+ HGGKMVPFAG+ MPVQYG++ I ASHLHTR + S+FDVSHMLQ+ + G+
Sbjct: 14 QRTVLYDFHVRHGGKMVPFAGYEMPVQYGSMGIAASHLHTRKQASLFDVSHMLQSKLHGE 73
Query: 257 HREEWLESICVADVH--ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
R +++ES+ V+D+ D GTL+++T E GGI DDLIV K D L++VSNA R
Sbjct: 74 DRVKFVESLVVSDIEGKASDSHHGTLTVYTTETGGIIDDLIVNKA-GDHLYVVSNAGCRD 132
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
D+ + A F++ G L+ + ++ L+AVQGP ++ +L D L L FM S
Sbjct: 133 KDLAHVRAKLSEFQAAGGRASLEVM--DDWALLAVQGPATARLLGPLVDKPLEPLTFMRS 190
Query: 375 RPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
TIAGIP C +TR GYTGEDGVEISVP + + AL+ E ++LAGLGARD+L
Sbjct: 191 ALVTIAGIPNCRITRCGYTGEDGVEISVPAGRAEELASALVGLEGLELAGLGARDTL 247
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 3/119 (2%)
Query: 8 LIFP-GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQR-VG 64
L+F GKRRR+T FPGA +I Q+ +RKR G + +G P R G I++ + Q+ +G
Sbjct: 271 LVFTIGKRRRQTADFPGAKVILEQLAQKPARKRVGIVAKSGAPARCGAPIYDESGQKALG 330
Query: 65 AITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
A+TSGCPSPS+ NIAMGY+ A +K+G L ++VR K V V KMPFV ++YYTPPK
Sbjct: 331 AVTSGCPSPSVGANIAMGYVPTASAKIGTPLQLQVRGKMVPAVVAKMPFVPTHYYTPPK 389
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 442 HGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
H KLS F++ G L+ + ++ L+AVQGP ++ +L D L L FM S
Sbjct: 137 HVRAKLSE--FQAAGGRASLEVM--DDWALLAVQGPATARLLGPLVDKPLEPLTFMRSAL 192
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TIAGIP C +TR GYTGEDGVEISVP + + AL+ E ++LAGLGARD+L
Sbjct: 193 VTIAGIPNCRITRCGYTGEDGVEISVPAGRAEELASALVGLEGLELAGLGARDTL 247
>gi|198433859|ref|XP_002125419.1| PREDICTED: similar to aminomethyltransferase [Ciona intestinalis]
Length = 405
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 153/231 (66%), Gaps = 5/231 (2%)
Query: 201 LYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREE 260
L+D H+ + KMVPFAG++MP+QY ++ I SH HTR+KVS+FDVSHMLQ V GK +E
Sbjct: 40 LHDFHVKNNAKMVPFAGWTMPIQYKSLGIIDSHHHTRNKVSLFDVSHMLQFKVYGKDKES 99
Query: 261 WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA-SRRKVDMDL 319
++ES+ V DV L G+L++FTN +GGI DD I+ +T +D L+ VSNA K+ L
Sbjct: 100 FIESMTVCDVKGLPENGGSLTVFTNAEGGIMDDAIINQTQQDYLYCVSNAGCSDKISTCL 159
Query: 320 MVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 379
D F + G ++ L+ L GL+AVQGP + +LQ TD DLS LYFM + +
Sbjct: 160 RENLID-FTAKGGEVVLELLDC---GLLAVQGPKMAEVLQTGTDTDLSKLYFMQNVEANL 215
Query: 380 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G+ C +TR GYTGEDGVEISV + + E + S EDV+LAGLGARDSL
Sbjct: 216 FGVDCRITRCGYTGEDGVEISVAKNRAVELAENICSHEDVELAGLGARDSL 266
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 70/108 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR+ FPGA I +QIKS S++R+G + R G + + N +G++TSGCP
Sbjct: 295 GKRRRKEKNFPGAEKIVAQIKSKPSKRRSGLIVSSAIARNGAIVQDGNGNEIGSVTSGCP 354
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L NIAM Y+ SKVG E+ V VR + V KVTKMPFV +NY+
Sbjct: 355 SPTLSANIAMAYLPLPLSKVGTEVNVLVRKRVVSAKVTKMPFVPANYF 402
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
F + G ++ L+ L + GL+AVQGP + +LQ TD DLS LYFM + + G+ C +
Sbjct: 166 FTAKGGEVVLELL---DCGLLAVQGPKMAEVLQTGTDTDLSKLYFMQNVEANLFGVDCRI 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TR GYTGEDGVEISV + + E + S EDV+LAGLGARDSL
Sbjct: 223 TRCGYTGEDGVEISVAKNRAVELAENICSHEDVELAGLGARDSL 266
>gi|440909004|gb|ELR58963.1| Aminomethyltransferase, mitochondrial [Bos grunniens mutus]
Length = 403
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 159/238 (66%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 HRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVN-SHLHTRQHCSLFDVSHMLQTKIFGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFT+E GGI DDLIVT E L++VSNA R+ D
Sbjct: 93 DRVKLMESLVVGDIAELKPNQGTLSLFTSEAGGILDDLIVTSASEGHLYVVSNAGCREKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LTLM---QDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP + + ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVRLAAALLKNPEVKLAGLAARDSL 264
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 68/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I Q+KS R+R G G P+R I + +GA+TSGCP
Sbjct: 293 GKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYY
Sbjct: 353 SPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVSTNYY 400
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LTLMQDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + + ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVRLAAALLKNPEVKLAGLAARDSL 264
>gi|390336854|ref|XP_785085.3| PREDICTED: aminomethyltransferase, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 408
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 153/237 (64%), Gaps = 6/237 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL D H+ HG KMVPFAG+SMPVQY + + HLH RS ++FDVSHMLQ+ + GK
Sbjct: 37 KRTPLSDFHVEHGAKMVPFAGYSMPVQYKS-GLVKEHLHCRSSAAIFDVSHMLQSRIYGK 95
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R +++ES+ VADV L P GTLSLF N+ GGI DDLI+ +T ED L++VSNA D
Sbjct: 96 DRVKFIESLTVADVEALKPNTGTLSLFINDHGGIIDDLIINQTSEDHLYIVSNAGCADKD 155
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ F + G D+ + ++ + LIA+QGP + +LQ DL L FM+
Sbjct: 156 QAHIKNKLALFVAEGHDVSYEPIT--DMALIALQGPAMARVLQAGVSDDLGKLTFMSGVN 213
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED--VKLAGLGARDSL 430
++ GIP C +TR GYTGEDGVEISVP + + LL+ +D V +AGLGARDSL
Sbjct: 214 TSVFGIPGCRVTRCGYTGEDGVEISVPSNRSVELTSTLLAAKDASVVMAGLGARDSL 270
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR+ FP A I QIK SRKR G S+G PIR G EI + + +R+G +TSGCP
Sbjct: 299 GKRRRQLADFPAADRILQQIKEKPSRKRVGIVSSGPPIRGG-EILSNSGERIGDVTSGCP 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSLK N+ MGY+ A++K G ++ +VR K V+ VTKMPFV +NYY
Sbjct: 358 SPSLKNNVIMGYVSAAHAKNGTKVQFQVRKKTVEGVVTKMPFVPTNYY 405
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
F + G D+ + ++ + LIA+QGP + +LQ DL L FM+ ++ GIP C
Sbjct: 166 FVAEGHDVSYEPIT--DMALIALQGPAMARVLQAGVSDDLGKLTFMSGVNTSVFGIPGCR 223
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDED--VKLAGLGARDSL 555
+TR GYTGEDGVEISVP + + LL+ +D V +AGLGARDSL
Sbjct: 224 VTRCGYTGEDGVEISVPSNRSVELTSTLLAAKDASVVMAGLGARDSL 270
>gi|195997667|ref|XP_002108702.1| hypothetical protein TRIADDRAFT_18436 [Trichoplax adhaerens]
gi|190589478|gb|EDV29500.1| hypothetical protein TRIADDRAFT_18436, partial [Trichoplax
adhaerens]
Length = 373
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 156/236 (66%), Gaps = 4/236 (1%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD HL HGGK+VPFAG+++P+QY + HLHTR + S+FDVSHMLQ
Sbjct: 1 KKTPLYDFHLQHGGKIVPFAGWALPIQYTGSGLVQEHLHTRQECSLFDVSHMLQLTFGNS 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++LES+ V DV L G+GTLS+FTNE GGI DDLIV+K ++S+ +VSNA+ +
Sbjct: 61 GCVKFLESLIVTDVANLPQGRGTLSVFTNENGGIIDDLIVSKISDESISVVSNAACSEKV 120
Query: 317 MDLMVAAQDRFKSLG-KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ + ++F S + + ++ ++ RGL+A+QGP S+ +LQR T+ +LS + FM
Sbjct: 121 VQHIQTKMNQFNSSSHQSVDVKVIT--NRGLLALQGPKSAVVLQRLTNSNLSQIPFMGYT 178
Query: 376 PCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
IA I C + R GYTGEDG EISVP + C + + L +VKLAGLGARDSL
Sbjct: 179 NSNIADIDGCFIARGGYTGEDGFEISVPSDYCAKLAQEFLKHPEVKLAGLGARDSL 234
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 80/109 (73%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GK RR TG FPG+ I Q++ G SRKR G STG P R G +IF+++D +G ITSG P
Sbjct: 263 GKARRNTGNFPGSDTIIKQLQEGPSRKRVGLISTGPPARGGTKIFSSHDDEIGIITSGSP 322
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKNIAMGYI+ A+ K+G E+ ++VR+K+V+ + +MPF+ SNYY
Sbjct: 323 SPSLKKNIAMGYIKTAFCKIGTEVQLQVRNKKVNATIARMPFLPSNYYN 371
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISV 526
RGL+A+QGP S+ +LQR T+ +LS + FM IA I C + R GYTGEDG EISV
Sbjct: 146 NRGLLALQGPKSAVVLQRLTNSNLSQIPFMGYTNSNIADIDGCFIARGGYTGEDGFEISV 205
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + C + + L +VKLAGLGARDSL
Sbjct: 206 PSDYCAKLAQEFLKHPEVKLAGLGARDSL 234
>gi|340372865|ref|XP_003384964.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Amphimedon
queenslandica]
Length = 407
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 159/235 (67%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+D HLS+GGKMVPFAG+SMPVQY +S+ S LHTRS S+FDVSHMLQT VTGK
Sbjct: 39 KKTPLFDFHLSNGGKMVPFAGWSMPVQYSDLSVINSSLHTRSSSSLFDVSHMLQTQVTGK 98
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E++LE + VA++ L G LS+FT QGGI DD I+T+T S F+VSNA R V
Sbjct: 99 GAEKFLEYLTVANLANLKNGNAVLSMFTIAQGGIIDDCIITRTGPQSFFVVSNAGRADVI 158
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + Q + + G D + S ER L+A+QGP S+++LQ DLS L FM+S
Sbjct: 159 NEHL---QTQLREFGDD-KVVLTSLSERALVALQGPKSASVLQEGVKGDLSQLKFMSSAL 214
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
++ GIP C ++R GYTGEDG EISVP +V+ LL+ + VKLAGLGARD L
Sbjct: 215 MSLFGIPDCRVSRCGYTGEDGFEISVPSTDVIQLVDTLLAADPVKLAGLGARDVL 269
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-C 509
+ + G D + S ER L+A+QGP S+++LQ DLS L FM+S ++ GIP C
Sbjct: 165 QLREFGDD-KVVLTSLSERALVALQGPKSASVLQEGVKGDLSQLKFMSSALMSLFGIPDC 223
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
++R GYTGEDG EISVP +V+ LL+ + VKLAGLGARD L
Sbjct: 224 RVSRCGYTGEDGFEISVPSTDVIQLVDTLLAADPVKLAGLGARDVL 269
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCP 71
K RR+ G F GA I Q+K S++R G +G P R G ++ +++ ++G ITSG P
Sbjct: 299 KTRRKDGNFLGAGPILQQLKDKPSKRRVGLELKSGPPAREGCQVIDSDGLKIGYITSGTP 358
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L+ NIAM Y+ + K+G + V++R V+ +V KMPFV S YY
Sbjct: 359 SPTLQYNIAMAYLPRQFCKIGTVVNVQIRKHTVNGRVVKMPFVPSRYY 406
>gi|307108946|gb|EFN57185.1| hypothetical protein CHLNCDRAFT_30552 [Chlorella variabilis]
Length = 418
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 150/234 (64%), Gaps = 3/234 (1%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+++GGKMVPFAG+SMP+QY SI S LH R+ S+FDVSHM + GK
Sbjct: 48 KKTVLYDYHVANGGKMVPFAGWSMPIQY-KDSIIDSTLHCRTHASIFDVSHMCGLTLKGK 106
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE + V D+ L G GTLS+FTNE+GGI DD +VTK D L++V NA R+ D
Sbjct: 107 DAVPFLEGLVVGDIAALADGTGTLSVFTNEKGGIIDDTVVTKVKGDELYIVVNAGCREKD 166
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + FK+ G + L ++R L+A+QGP + +LQ+ DL +YF R
Sbjct: 167 LAHIGKHLEAFKAKGGQVDLVL--HDDRSLLALQGPEAVAVLQQFVGEDLDKVYFSNFRK 224
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+PC LTR GYTGEDG E+S+P ++ + EAL+ D V+L GLG RDSL
Sbjct: 225 LDIKGVPCFLTRTGYTGEDGFELSIPSDRTVELTEALMGDRRVRLCGLGPRDSL 278
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 74/112 (66%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRRE F G +I+ Q+ GVS +R GF S+G P R E+ + ++VG ITSG
Sbjct: 307 GKRRREAFDFLGGQVIKQQLADGVSVRRVGFVSSGAPARQHSEVLTTDGKKVGEITSGAF 366
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SP LKKNIAMGY++ + +K G EL V VR K D VTKMPFV ++Y+ PP+
Sbjct: 367 SPCLKKNIAMGYVDKSMAKAGTELKVNVRGKLNDATVTKMPFVPTHYHKPPQ 418
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G + L ++R L+A+QGP + +LQ+ DL +YF R I G+PC L
Sbjct: 177 FKAKGGQVDLVL--HDDRSLLALQGPEAVAVLQQFVGEDLDKVYFSNFRKLDIKGVPCFL 234
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TR GYTGEDG E+S+P ++ + EAL+ D V+L GLG RDSL
Sbjct: 235 TRTGYTGEDGFELSIPSDRTVELTEALMGDRRVRLCGLGPRDSL 278
>gi|407475|emb|CAA52800.1| T-protein of the glycine decarboxylase complex [Pisum sativum]
Length = 408
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ S ++T LYD H++HGGKMVPFAG+SMP+QY SI S L+ R S+FDVSHM
Sbjct: 31 ATESELKKTVLYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTLNCRQNGSLFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L G GTL++FTNE+GG DD ++TK ED L+LV NA
Sbjct: 90 LSLKGKDVISFLEKLVIADVAALANGTGTLTVFTNEKGGAIDDSVITKVTEDHLYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +ALL S+ ++L GLGARD
Sbjct: 208 FGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+ G S +R GF S+G P R EI + +G +TSG
Sbjct: 298 GKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPPRSHSEIQDEGGNNIGEVTSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIA+GY++ K G ++ + +R K+ + VTKMPFV + YY P
Sbjct: 358 SPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKQNEGVVTKMPFVPTKYYKP 407
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGEFRVLDINGSQCFL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +ALL S+ ++L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIRLTGLGARDSL 269
>gi|449473769|ref|XP_004176361.1| PREDICTED: LOW QUALITY PROTEIN: aminomethyltransferase,
mitochondrial [Taeniopygia guttata]
Length = 367
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 148/222 (66%), Gaps = 5/222 (2%)
Query: 210 GKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVAD 269
G+ VPFAG+++P YG + SHLHTR S+FDVSHMLQT+V G+ R ++ES+ V D
Sbjct: 10 GRRVPFAGWTLPQHYGQGHLQ-SHLHTRRHCSLFDVSHMLQTLVYGRDRVRFMESLVVGD 68
Query: 270 VHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKS 329
+ EL PG+GTL+L TNE+GGI DDLIVT T ED L++VSNA+ D+ ++ + ++
Sbjct: 69 IAELKPGQGTLTLLTNERGGIMDDLIVTNTSEDHLYVVSNAACADKDLAILRDRAAQLQA 128
Query: 330 LGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTR 388
G D+HL+ + L+A+QGP + +LQ DL+ L FM S T+ G+P C +TR
Sbjct: 129 TGSDVHLEV---SDNALLALQGPSMARVLQAGLSDDLAKLSFMNSITTTVFGVPGCRVTR 185
Query: 389 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
GYTGEDGVEISVP + + E LL DV LAGL ARDSL
Sbjct: 186 CGYTGEDGVEISVPAARAVELAEQLLDVPDVWLAGLAARDSL 227
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGV-SRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGC 70
G RRR FPGA++ +Q + + G + PIRP I + VG +TSGC
Sbjct: 256 GNRRRVDMDFPGAAVYMAQTEIRIKCTSLXGLSFIAPPIRPHMAILGPKGRPVGTVTSGC 315
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP L KNIAMGY+E A+S+ G EL V VR K+ +TKMPFV + YY
Sbjct: 316 PSPCLGKNIAMGYVEAAHSRAGTELTVEVRKKQHPAVITKMPFVPTQYY 364
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 437 NTPVPHGSLKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSS 493
N L + DR ++ G D+HL+ + L+A+QGP + +LQ DL+
Sbjct: 108 NAACADKDLAILRDRAAQLQATGSDVHLEV---SDNALLALQGPSMARVLQAGLSDDLAK 164
Query: 494 LYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 552
L FM S T+ G+P C +TR GYTGEDGVEISVP + + E LL DV LAGL AR
Sbjct: 165 LSFMNSITTTVFGVPGCRVTRCGYTGEDGVEISVPAARAVELAEQLLDVPDVWLAGLAAR 224
Query: 553 DSL 555
DSL
Sbjct: 225 DSL 227
>gi|294460278|gb|ADE75721.1| unknown [Picea sitchensis]
Length = 411
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 157/242 (64%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S ++ ++T LYD H+ +GGKMVPFAG+SMP+QY SI S ++ R+ S+FDVSHM
Sbjct: 34 SDEASLKKTALYDFHVQNGGKMVPFAGWSMPIQY-KDSIMDSTVNCRTNGSLFDVSHMCG 92
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + VADV L PG GTL++FTNE+GG DD IVTK +D +++V NA
Sbjct: 93 LSLKGKDCVPFLEKLVVADVAGLSPGSGTLTVFTNEKGGATDDSIVTKVKDDHIYIVVNA 152
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + + FK+ G D+ Q ++R L+A+QGPL++ LQ+ T DLS LY
Sbjct: 153 GCRDKDLAHIESHMKAFKARGGDVDWQI--HDDRSLLALQGPLAAPTLQKLTKEDLSKLY 210
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F + R I G PC +TR GYTGEDG EISVP + + +A+L + ++L GLGARD
Sbjct: 211 FSSFRMIDINGSPCYITRTGYTGEDGFEISVPSDHAVDLTKAILDGGEGKLRLTGLGARD 270
Query: 429 SL 430
SL
Sbjct: 271 SL 272
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 69/110 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R+R G S G P R EI +A+ +G +TSG
Sbjct: 301 GKRRRTEGGFLGAEVILKQLEEGPARRRVGMISAGPPPRSHSEIMDASGNPIGEVTSGGF 360
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNI+MGY++ K G EL V VR K D VTKMPFV + YY P
Sbjct: 361 SPCLKKNISMGYVKSGNHKTGSELKVLVRGKPYDATVTKMPFVPAKYYKP 410
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ Q ++R L+A+QGPL++ LQ+ T DLS LYF + R I G PC +
Sbjct: 169 FKARGGDVDWQI--HDDRSLLALQGPLAAPTLQKLTKEDLSKLYFSSFRMIDINGSPCYI 226
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP + + +A+L + ++L GLGARDSL
Sbjct: 227 TRTGYTGEDGFEISVPSDHAVDLTKAILDGGEGKLRLTGLGARDSL 272
>gi|225718822|gb|ACO15257.1| Aminomethyltransferase, mitochondrial precursor [Caligus clemensi]
Length = 268
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 154/241 (63%), Gaps = 4/241 (1%)
Query: 192 SPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
+ A +RT L+D HL GKMV FAG+SMP+QY +SI SH HTRS S+FDVSHM Q+
Sbjct: 19 ASGALKRTCLHDFHLEKAGKMVGFAGYSMPIQYADLSIGESHHHTRSHCSIFDVSHMQQS 78
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
V GK R +++ S+ D L G+L++FTNE+GGI DDLIV T E LFLV+NA
Sbjct: 79 RVMGKDRMKFIGSLTTLDGEALGDNSGSLTIFTNERGGIIDDLIVMNTGEGYLFLVTNAG 138
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ LM + K G D+ L+ + ++ GLIA+QGP ILQ TD+DL L F
Sbjct: 139 CKDKDIPLMKTKAETLKKNGLDVELELI--DDHGLIAIQGPQMLEILQPLTDVDLGRLKF 196
Query: 372 MTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALL-SDEDVKLAGLGARDS 429
M + ++ G+P C +TR GYTGEDGVE+ +P E + ++ S V+LAGLGARDS
Sbjct: 197 MWTSLGSVCGVPNCRITRCGYTGEDGVEVFIPQEYTVSVTRQIIESSPFVRLAGLGARDS 256
Query: 430 L 430
L
Sbjct: 257 L 257
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 504
+K + K G D+ L+ + ++ GLIA+QGP ILQ TD+DL L FM + ++
Sbjct: 147 MKTKAETLKKNGLDVELELI--DDHGLIAIQGPQMLEILQPLTDVDLGRLKFMWTSLGSV 204
Query: 505 AGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALL-SDEDVKLAGLGARDSL 555
G+P C +TR GYTGEDGVE+ +P E + ++ S V+LAGLGARDSL
Sbjct: 205 CGVPNCRITRCGYTGEDGVEVFIPQEYTVSVTRQIIESSPFVRLAGLGARDSL 257
>gi|449454756|ref|XP_004145120.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Cucumis
sativus]
gi|449472329|ref|XP_004153559.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Cucumis
sativus]
Length = 407
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ S ++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R +FDVSHM
Sbjct: 30 SAESELKKTVLYDFHVTHGGKMVPFAGWSMPIQY-KDSIMDSTVNCRQNGGLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + VADV L PG GTL++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDSIAFLEKLVVADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQYLTKDDLSKLY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGEFRILDINGARCFLTRTGYTGEDGFEISVPSENALDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 70/110 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G + +R GF S+G P R EI N + + +G +TSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQLEEGPAIRRVGFFSSGPPARSHSEIQNEDGKNIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G ++ + VR K D VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAMGYVKSGTHKAGTKVKIIVRGKAYDGVVTKMPFVPTKYYKP 406
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQYLTKDDLSKLYFGEFRILDINGARCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENALDLAKAILEKSEGKVRLTGLGARDSL 268
>gi|384250040|gb|EIE23520.1| glycine cleavage system, T protein [Coccomyxa subellipsoidea C-169]
Length = 418
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 149/234 (63%), Gaps = 4/234 (1%)
Query: 198 RTPLYDLHLSHGG-KMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+TPLYD H+ +GG KMVPFAG+SMP+QY SI + H R S+FDVSHM + GK
Sbjct: 45 KTPLYDFHVEYGGGKMVPFAGWSMPIQYKD-SIMDATKHCRENGSIFDVSHMCGLTLKGK 103
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE + V DV + G G+LS+FTNEQGGI DD ++TK +D ++LV NA R+ D
Sbjct: 104 DAVAFLEKLVVGDVAGIKNGSGSLSVFTNEQGGIIDDTVITKVADDEIYLVVNAGCREKD 163
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + D++KS G + + ++R L+A+QGP + LQ D+DLS +YF
Sbjct: 164 LAHIGKHLDKYKSEGGAVEMTV--HDDRSLLALQGPAAVETLQPLVDVDLSKVYFSDFHK 221
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
IAGIPC LTR GYTGEDG EIS P E+ + + LL + +++ GLGARDSL
Sbjct: 222 LNIAGIPCYLTRTGYTGEDGFEISAPDEKALELTKKLLENPRIRMCGLGARDSL 275
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 70/111 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRRE F G +I+ Q+ GVS++R G STG P R +IF + VG +TSG
Sbjct: 304 GKRRREACDFLGGEVIKKQLAEGVSQRRVGLVSTGAPARQHSKIFTMEGKEVGEVTSGAF 363
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
SP LKKNIAMGY+E AY+K G EL V VR K VTKMPFV + Y+ P
Sbjct: 364 SPCLKKNIAMGYVEKAYAKSGTELQVEVRGKINPAVVTKMPFVPNTYFKAP 414
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
D++KS G + + ++R L+A+QGP + LQ D+DLS +YF IAGIPC
Sbjct: 172 DKYKSEGGAVEMTV--HDDRSLLALQGPAAVETLQPLVDVDLSKVYFSDFHKLNIAGIPC 229
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
LTR GYTGEDG EIS P E+ + + LL + +++ GLGARDSL
Sbjct: 230 YLTRTGYTGEDGFEISAPDEKALELTKKLLENPRIRMCGLGARDSL 275
>gi|3915699|sp|P49364.2|GCST_PEA RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|438217|emb|CAA81080.1| T-protein [Pisum sativum]
gi|3021553|emb|CAA10976.1| T protein [Pisum sativum]
Length = 408
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ S ++T LYD H++HGGKMVPFAG+SMP+QY SI S L+ R S+FDVSHM
Sbjct: 31 ATESELKKTVLYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTLNCRQNGSLFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L G GTL++FTNE+GG DD ++TK +D L+LV NA
Sbjct: 90 LSLKGKDVVSFLEKLVIADVAALAHGTGTLTVFTNEKGGAIDDSVITKVTDDHLYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +ALL S+ ++L GLGARD
Sbjct: 208 FGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+ G S +R GF S+G P R EI + +G +TSG
Sbjct: 298 GKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPPRSHSEIQDEGGNNIGEVTSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIA+GY++ K G ++ + +R K+ + VTKMPFV + YY P
Sbjct: 358 SPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKQNEGVVTKMPFVPTKYYKP 407
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGEFRVLDINGSQCFL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +ALL S+ ++L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIRLTGLGARDSL 269
>gi|307136227|gb|ADN34064.1| aminomethyltransferase [Cucumis melo subsp. melo]
Length = 407
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ S ++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R +FDVSHM
Sbjct: 30 SAESELKKTVLYDFHVTHGGKMVPFAGWSMPIQY-KDSIMDSTVNCRQNGGLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + VADV L PG GTL++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDSIPFLEKLVVADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQYLTKDDLSKLY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGEFRILDINGARCFLTRTGYTGEDGFEISVPSENALDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 69/110 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G + +R GF S+G P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQLEDGPAIRRVGFFSSGPPARSHSEIQNEGGKNIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G ++ + VR K D VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAMGYVKSGSHKAGTKVKIIVRGKAYDGVVTKMPFVPTKYYKP 406
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQYLTKDDLSKLYFGEFRILDINGARCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENALDLAKAILEKSEGKVRLTGLGARDSL 268
>gi|3334197|sp|O49849.1|GCST_FLAAN RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|2894400|emb|CAA94902.1| T-protein [Flaveria anomala]
Length = 407
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEADLKKTVLYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTINCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + VADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHIY--DERSLLALQGPLAGSTLQHLTKEDLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGDFRIIDINGSKCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI G + +R G STG P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNI MGY++ K G +L + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKP 406
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +YF R I G C L
Sbjct: 165 FKAKGGDVSWHIY--DERSLLALQGPLAGSTLQHLTKEDLSKMYFGDFRIIDINGSKCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 268
>gi|328769709|gb|EGF79752.1| hypothetical protein BATDEDRAFT_16867 [Batrachochytrium
dendrobatidis JAM81]
Length = 415
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/248 (45%), Positives = 158/248 (63%), Gaps = 4/248 (1%)
Query: 185 FVFSPGSSPSAE--QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSV 242
+V S+PS++ +RT LYD H+ +GGKMV FAG+ MPVQY ++ + SHL TR S+
Sbjct: 23 WVRCMASAPSSQPFKRTSLYDFHVKNGGKMVEFAGWDMPVQYSSLGVLDSHLWTRKHASI 82
Query: 243 FDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED 302
FDVSHMLQT +GK +++ES+ V D+ L G TLS+FTNE+GGI DD ++ + +
Sbjct: 83 FDVSHMLQTRWSGKDHVKFMESLVVGDIAGLQMGSSTLSVFTNEKGGIIDDTVINRQDDK 142
Query: 303 SLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT 362
L++VSNA D+ + F++ G D+ ++ L + LIA+QGP ++T++Q T
Sbjct: 143 GLYVVSNAGCADKDLAHIRKQLADFQNKGGDVDVKVL--DNVSLIALQGPDAATVVQSLT 200
Query: 363 DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLA 422
DLS FMTSR IAG+ +R GYTGEDG EISV + + + LL V+LA
Sbjct: 201 KEDLSKFGFMTSRHMDIAGVDVYASRCGYTGEDGFEISVAHKDAVALTQKLLDHPHVELA 260
Query: 423 GLGARDSL 430
GLGARDSL
Sbjct: 261 GLGARDSL 268
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 9/117 (7%)
Query: 12 GKRRRETGGFPGASIIQSQIKS--------GVSRKRTGFTSTGVPIRPGYEIFN-ANDQR 62
GKRRR GGF GA I SQ+K V+ +R GF +G P R G EI++ N +
Sbjct: 297 GKRRRAEGGFLGADKILSQLKVTAKGNVQLDVANRRVGFIVSGAPAREGAEIYDKVNGTK 356
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G ITSGCPSPS+ KNI MGYI+ + K+G E+ V+VR++ V+KMPFV NY+
Sbjct: 357 IGTITSGCPSPSMMKNIGMGYIQTGFHKIGTEVQVKVRNRFQPAVVSKMPFVAHNYF 413
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
F++ G D+ ++ L + LIA+QGP ++T++Q T DLS FMTSR IAG+
Sbjct: 167 FQNKGGDVDVKVL--DNVSLIALQGPDAATVVQSLTKEDLSKFGFMTSRHMDIAGVDVYA 224
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R GYTGEDG EISV + + + LL V+LAGLGARDSL
Sbjct: 225 SRCGYTGEDGFEISVAHKDAVALTQKLLDHPHVELAGLGARDSL 268
>gi|1707878|sp|P54260.1|GCST_SOLTU RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|438254|emb|CAA81081.1| T-protein [Solanum tuberosum]
Length = 406
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+ +GGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASDADLKKTVLYDFHVVNGGKMVPFAGWSMPIQY-KDSIMDSTVNCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG G+L++FTNE+GG DD +VTK D ++LV NA
Sbjct: 89 LSLKGKDTIPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVVTKVTNDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FKS G D+ +ER L+A+QGPL++ +LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKSFKSKGGDVSWHI--HDERSLLALQGPLAAPVLQYLTKDDLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G PC LTR GYTGEDG EISVP E + +ALL S+ ++L GLGARD
Sbjct: 207 FGEFRVLDINGAPCFLTRTGYTGEDGFEISVPSENALDLAKALLEKSEGKIRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 69/110 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI+ G +R GF S+G P R EI ++N Q +G ITSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRSHSEIQDSNGQNIGEITSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G + + +R K D VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAMGYVKTGNHKAGTNVKIVIRGKSYDGVVTKMPFVPTKYYKP 406
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FKS G D+ +ER L+A+QGPL++ +LQ T DLS +YF R I G PC L
Sbjct: 165 FKSKGGDVSWHI--HDERSLLALQGPLAAPVLQYLTKDDLSKMYFGEFRVLDINGAPCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +ALL S+ ++L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENALDLAKALLEKSEGKIRLTGLGARDSL 268
>gi|432866017|ref|XP_004070663.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Oryzias
latipes]
Length = 398
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 155/241 (64%), Gaps = 21/241 (8%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ A ++TPL+D H +H GKMV FAG+S+PVQY I SH+HTR S+FDVSHMLQ
Sbjct: 40 SAEVALKKTPLFDFHKAHDGKMVNFAGWSLPVQYKDSHIV-SHMHTREHCSIFDVSHMLQ 98
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V GK R +++ES+ VAD+ EL +GTLSLFTNE+GGI DDLIVTKT + L++VSNA
Sbjct: 99 TKVHGKDRVKFMESLVVADIAELKTNQGTLSLFTNEKGGIIDDLIVTKTDQGYLYVVSNA 158
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ D +H++ + + + GP S +LQ +L+ L
Sbjct: 159 GCAEKD----------------SVHMKGGRPSD---LKIAGPSMSRVLQEGLKDNLNKLT 199
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FMTS T+ G+P C +TR GYTGEDGVEISV + ++E LL++ +VKLAGL ARDS
Sbjct: 200 FMTSTVATVFGVPDCRITRCGYTGEDGVEISVSRLRAVELIEKLLANSEVKLAGLAARDS 259
Query: 430 L 430
L
Sbjct: 260 L 260
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 77/117 (65%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
+ + L+ GKRRR+ FPGA I+ QIK+ RKR G STG P+R I + + +
Sbjct: 280 VEATLVWTIGKRRRKDKDFPGAEIVVPQIKAKTVRKRVGLVSTGPPVRQHTPILSPDGKV 339
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G +TSGCPSP LKKN+AMGY++ ++K G ++ V +R K V V++MPFV +NYY
Sbjct: 340 IGEVTSGCPSPCLKKNVAMGYVDSEFAKNGTDIQVEIRKKAVRAVVSRMPFVPTNYY 396
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYT 517
+H++ P + + + GP S +LQ +L+ L FMTS T+ G+P C +TR GYT
Sbjct: 166 VHMKGGRPSD---LKIAGPSMSRVLQEGLKDNLNKLTFMTSTVATVFGVPDCRITRCGYT 222
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDGVEISV + ++E LL++ +VKLAGL ARDSL
Sbjct: 223 GEDGVEISVSRLRAVELIEKLLANSEVKLAGLAARDSL 260
>gi|356555678|ref|XP_003546157.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Glycine max]
Length = 407
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 155/242 (64%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S L+ R S+FDVSHM
Sbjct: 30 ASDAELKKTVLYDFHVANGGKMVPFAGWSMPIQY-KDSIMDSTLNCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDSVPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVKDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G+ C LTR GYTGEDG EIS+P E + +A+L S+ ++L GLGARD
Sbjct: 207 FGEFRVLDINGVQCFLTRTGYTGEDGFEISIPSESAVDLAKAILEKSEGKIRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R GF S+G P R EI + +G ++SG
Sbjct: 297 GKRRRAEGGFLGADVILKQLEEGPKIRRVGFFSSGPPPRSHSEIQDEGGNNIGEVSSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIA+GY++ K G ++ + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKSNEGVVTKMPFVPTKYYKP 406
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +YF R I G+ C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKMYFGEFRVLDINGVQCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EIS+P E + +A+L S+ ++L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISIPSESAVDLAKAILEKSEGKIRLTGLGARDSL 268
>gi|224113289|ref|XP_002332617.1| precursor of carboxylase t-protein 2, glycine decarboxylase complex
[Populus trichocarpa]
gi|222832818|gb|EEE71295.1| precursor of carboxylase t-protein 2, glycine decarboxylase complex
[Populus trichocarpa]
Length = 408
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + Q+T LYD H+++GGKMVPFAG+ MP+QY SI S ++ R S+FDVSHM
Sbjct: 31 ASEAELQKTVLYDFHVANGGKMVPFAGWGMPIQY-KDSIMESTVNCRQNGSLFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK D +++V NA
Sbjct: 90 LSLKGKDCIPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVQNDHMYIVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPLS+++LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLSASVLQHLTKDDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C +TR GYTGEDG EISVP E + +A+L S+ ++L GLGARD
Sbjct: 208 FGEFRITDINGAYCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKIRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 64/110 (58%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q+ G + GFTSTG P R EI + +G ITSG
Sbjct: 298 GKRRKAEGGFLGAEVILKQLAEGPKIRLVGFTSTGPPPRSHSEIQDEKGTNIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G + + VR K D VTK PFV + YY P
Sbjct: 358 SPCLKKNIAMGYVKSGSHKAGTKAKILVRGKAYDGAVTKKPFVPTKYYKP 407
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPLS+++LQ T DLS LYF R I G C +
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLSASVLQHLTKDDLSKLYFGEFRITDINGAYCFI 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ ++L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKIRLTGLGARDSL 269
>gi|356562997|ref|XP_003549753.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Glycine max]
Length = 407
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T +D H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEAELKKTVFHDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTINCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDAAPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGEFRVLDINGSECFLTRTGYTGEDGFEISVPSEHGVDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R GF S+G P R EI + +G ITSG
Sbjct: 297 GKRRRAEGGFLGADVILKQLEEGPKIRRVGFFSSGPPPRSHSEIQDEGGNNIGEITSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP L+KNIAMGY++ K ++ + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLQKNIAMGYVKSGLHKAATKVKIIIRGKPNEGVVTKMPFVPTKYYKP 406
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGEFRVLDINGSECFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSEHGVDLAKAILEKSEGKVRLTGLGARDSL 268
>gi|443723511|gb|ELU11888.1| hypothetical protein CAPTEDRAFT_170641 [Capitella teleta]
Length = 359
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 147/222 (66%), Gaps = 6/222 (2%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MV F G+S+PVQY +S++ASHLHTR S+FDVSHMLQT + GK R E++E + VADV
Sbjct: 1 MVDFTGWSLPVQYSDLSLSASHLHTRQHASIFDVSHMLQTKIHGKDRVEFMEKLVVADVA 60
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG 331
L+ G+GTLSL TNE GGI DDLIVT E L++VSNA+ + D+ + ++ G
Sbjct: 61 ALNEGQGTLSLLTNENGGIIDDLIVTNAAEGYLYVVSNAACAEKDLAHIQGTAAECRAKG 120
Query: 332 KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI-PCTLTRAG 390
D+ ++ + E GLIA+QGP LQ DL+SL FM S T+ G+ C +TR G
Sbjct: 121 LDVSVEIM---ESGLIALQGPDMLKALQPGMTFDLTSLPFMNSVMATVFGVKECRVTRCG 177
Query: 391 YTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
YTGEDGVEIS+P +H+ LL ++ VKLAGLGARDSL
Sbjct: 178 YTGEDGVEISIPSAMASHVATRLLESTEAPVKLAGLGARDSL 219
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
GKRRR+ FPGA II Q+K+ S+KR GF S G P R IF+ + ++++G +TSGC
Sbjct: 248 GKRRRQEANFPGAKIILDQLKAKPSKKRVGFLSKGPPARGAMPIFDESGEKQIGLVTSGC 307
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
PSPSLK N+AMGY+E ++K G + +VR K VD V+KMPFV + Y+T
Sbjct: 308 PSPSLKANVAMGYVELPHAKNGTPVKFQVRKKLVDATVSKMPFVPAKYFT 357
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTL 511
++ G D+ ++ + E GLIA+QGP LQ DL+SL FM S T+ G+ C +
Sbjct: 117 RAKGLDVSVEIM---ESGLIALQGPDMLKALQPGMTFDLTSLPFMNSVMATVFGVKECRV 173
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDGVEIS+P +H+ LL ++ VKLAGLGARDSL
Sbjct: 174 TRCGYTGEDGVEISIPSAMASHVATRLLESTEAPVKLAGLGARDSL 219
>gi|357480341|ref|XP_003610456.1| Aminomethyltransferase [Medicago truncatula]
gi|355511511|gb|AES92653.1| Aminomethyltransferase [Medicago truncatula]
Length = 433
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ S ++T LYD H++HGGKMVPFAG+SMP+QY SI S L+ R S+FDV+HM
Sbjct: 56 ATDSDLKKTVLYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTLNCRQNGSLFDVAHMCG 114
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK + ++LV NA
Sbjct: 115 LSLKGKDAVSFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDHHIYLVVNA 174
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 175 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERTLLALQGPLAAPVLQHLTKDDLSKLY 232
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ ++L GLGARD
Sbjct: 233 FGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVDLAKAILEKSEGKIRLTGLGARD 292
Query: 429 SL 430
SL
Sbjct: 293 SL 294
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+ G S +R GF S+G P R EI + +G +TSG
Sbjct: 323 GKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPARSHSEIQDEGGNNIGEVTSGGF 382
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G ++ + +R K + VTKMPFV + YY P
Sbjct: 383 SPCLKKNIAMGYVKSGLHKAGTKVKIIIRGKANEGVVTKMPFVPTKYYKP 432
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 191 FKAKGGDVSWHI--HDERTLLALQGPLAAPVLQHLTKDDLSKLYFGEFRVLDINGSQCFL 248
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ ++L GLGARDSL
Sbjct: 249 TRTGYTGEDGFEISVPSEHGVDLAKAILEKSEGKIRLTGLGARDSL 294
>gi|224113699|ref|XP_002316546.1| precursor of carboxylase t-protein 1, glycine decarboxylase complex
[Populus trichocarpa]
gi|222859611|gb|EEE97158.1| precursor of carboxylase t-protein 1, glycine decarboxylase complex
[Populus trichocarpa]
Length = 408
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 154/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+ MP+QY SI S ++ R S+FDVSHM
Sbjct: 31 ASEAELKKTVLYDFHVANGGKMVPFAGWGMPIQY-KDSIMESTVNCRQNGSLFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK +D +++V NA
Sbjct: 90 FSLKGKDCVPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDDHMYIVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + A FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +Y
Sbjct: 150 GCRDKDLAHIEAHMKSFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKVY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C +TR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 208 FGEFRITDINGARCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q+ G + GF+STG P R EI + +G ITSG
Sbjct: 298 GKRRKAEGGFLGAEVILKQLAEGPKVRLVGFSSTGPPPRSHSEIQDEKGTNIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ + K G + + VR K D VTK PFV + YY P
Sbjct: 358 SPCLKKNIAMGYVKSGFHKAGTKAKILVRGKAYDGVVTKKPFVPTKYYKP 407
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +YF R I G C +
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKVYFGEFRITDINGARCFI 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 269
>gi|388495442|gb|AFK35787.1| unknown [Medicago truncatula]
Length = 407
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ S ++T LYD H++HGGKMVPFAG+SMP+QY SI S L+ R S+FDV+HM
Sbjct: 30 ATDSDLKKTVLYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTLNCRQNGSLFDVAHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK + ++LV NA
Sbjct: 89 LSLKGKDAVSFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDHHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERTLLALQGPLAAPVLQHLTKDDLSKLY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ ++L GLGARD
Sbjct: 207 FGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVDLAKAILEKSEGKIRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+ G S +R GF S+G P R EI + +G +TSG
Sbjct: 297 GKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPARSHSEIQDEGGNNIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G ++ + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAMGYVKSGLHKAGTKVKIIIRGKANEGVVTKMPFVPTKYYKP 406
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 165 FKAKGGDVSWHI--HDERTLLALQGPLAAPVLQHLTKDDLSKLYFGEFRVLDINGSQCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ ++L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSEHGVDLAKAILEKSEGKIRLTGLGARDSL 268
>gi|3334196|sp|O23936.1|GCST_FLATR RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|2467117|emb|CAB16917.1| T-Protein precursor [Flaveria trinervia]
Length = 407
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 154/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEADLKKTVLYDFHVANGGKMVPFAGWSMPIQY-KDSIMESTINCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + VADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEQHMKAFKAKGGDVSWHI--HDERSLLALQGPLAGSTLQHLTKDDLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I+G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGDFRIIDISGSKCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI G + +R G STG P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEQGENIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNI MGY++ K G +L + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKP 406
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +YF R I+G C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAGSTLQHLTKDDLSKMYFGDFRIIDISGSKCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 268
>gi|134142798|gb|ABO61733.1| mitochondrial glycine decarboxylase complex T-protein [Populus
tremuloides]
Length = 408
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 31 ASEAELKKTVLYDFHVANGGKMVPFAGWSMPIQY-KDSIMESTVNCRQNGSIFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK D +++V NA
Sbjct: 90 FSLKGKDCIPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVQNDHMYIVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPLS++ LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLSASALQHLTKDDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C +TR GYTGEDG EISVP E + +A+L S+ ++L GLGARD
Sbjct: 208 FGEFRITDINGAHCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKIRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 64/110 (58%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q+ G + GFTSTG P R EI + +G ITSG
Sbjct: 298 GKRRKAEGGFLGAEVILKQLAEGPKIRLVGFTSTGPPPRSHSEIQDEKGTNIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G + + VR K D VTK PFV + YY P
Sbjct: 358 SPCLKKNIAMGYVKSGSHKAGTKAKILVRGKAYDGVVTKKPFVPTKYYKP 407
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPLS++ LQ T DLS LYF R I G C +
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLSASALQHLTKDDLSKLYFGEFRITDINGAHCFI 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ ++L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKIRLTGLGARDSL 269
>gi|15221119|ref|NP_172650.1| aminomethyltransferase [Arabidopsis thaliana]
gi|30682471|ref|NP_849646.1| aminomethyltransferase [Arabidopsis thaliana]
gi|334182489|ref|NP_001184969.1| aminomethyltransferase [Arabidopsis thaliana]
gi|18206365|sp|O65396.1|GCST_ARATH RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|3157944|gb|AAC17627.1| Very strong similarity to aminomethyltransferase precursor
gb|U79769 from Mesembryanthemum crystallinum. ESTs
gb|T43167, gb|T21076, gb|H36999, gb|T22773, gb|N38038,
gb|T13742, gb|Z26545, gb|T20753 and gb|W43123 come from
this gene [Arabidopsis thaliana]
gi|21928147|gb|AAM78101.1| At1g11860/F12F1_30 [Arabidopsis thaliana]
gi|30102502|gb|AAP21169.1| At1g11860/F12F1_30 [Arabidopsis thaliana]
gi|332190681|gb|AEE28802.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332190682|gb|AEE28803.1| aminomethyltransferase [Arabidopsis thaliana]
gi|332190683|gb|AEE28804.1| aminomethyltransferase [Arabidopsis thaliana]
Length = 408
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 155/242 (64%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDV+HM
Sbjct: 31 ASEADLKKTALYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTVNCRENGSLFDVAHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE++ VADV L PG G+L++FTNE+GG DD ++TK ++ ++LV NA
Sbjct: 90 LSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FKS G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKSKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F + I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 208 FGNFQILDINGSTCFLTRTGYTGEDGFEISVPDEHAVDLAKAILEKSEGKVRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+K G + +R GF S+G P R E+ + + ++G ITSG
Sbjct: 298 GKRRRAEGGFLGADVILQQLKDGPTIRRVGFFSSGPPARSHSEVHDESGNKIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP+LKKNIAMGY++ K G ++ + VR K + +TKMPFV + YY P
Sbjct: 358 SPNLKKNIAMGYVKSGQHKTGTKVKILVRGKPYEGSITKMPFVATKYYKP 407
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FKS G D+ +ER L+A+QGPL++ +LQ T DLS LYF + I G C L
Sbjct: 166 FKSKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGNFQILDINGSTCFL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPDEHAVDLAKAILEKSEGKVRLTGLGARDSL 269
>gi|1346121|sp|P49363.1|GCST_FLAPR RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|438005|emb|CAA81077.1| T protein [Flaveria pringlei]
Length = 407
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEADLKKTVLYDFHVANGGKMVPFAGWSMPIQY-KDSIMESTINCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + VADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDCVPFLEKLVVADVAGLRPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHIY--DERSLLALQGPLAGSTLQHLTKEDLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGDFRIIDINGSKCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI G + +R G STG P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNI MGY++ K G +L + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKP 406
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +YF R I G C L
Sbjct: 165 FKAKGGDVSWHIY--DERSLLALQGPLAGSTLQHLTKEDLSKMYFGDFRIIDINGSKCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 268
>gi|412992486|emb|CCO18466.1| predicted protein [Bathycoccus prasinos]
Length = 426
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/234 (48%), Positives = 148/234 (63%), Gaps = 6/234 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+ HGGKMV FAGFSMP+QY SI + H R+K S+FDVSHML + GK
Sbjct: 59 KKTVLYDFHVKHGGKMVEFAGFSMPIQY-KDSIMEATQHCRTKASLFDVSHMLGSSFKGK 117
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+++ESI VADV L G GTLS+ TN+ GGI DD +VTK ++ +++V NA D
Sbjct: 118 DAVKFVESITVADVKGLADGTGTLSVVTNDDGGIIDDTVVTKVNDEWIYVVLNAGCADKD 177
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ +F D +F+ +R L A+QGP + LQ+ TD DLS LYF +
Sbjct: 178 KAHINKHLAKF-----DGDCKFIEHSDRSLFALQGPKAMETLQKLTDADLSKLYFGMFKE 232
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T++G PC +TR GYTGEDG EISVP +VE L+ D +V+L GLGARDSL
Sbjct: 233 MTVSGQPCWVTRTGYTGEDGFEISVPVPGTLKLVEDLVGDANVRLCGLGARDSL 286
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 453 KSLGK-DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
K L K D +F+ +R L A+QGP + LQ+ TD DLS LYF + T++G PC +
Sbjct: 183 KHLAKFDGDCKFIEHSDRSLFALQGPKAMETLQKLTDADLSKLYFGMFKEMTVSGQPCWV 242
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP +VE L+ D +V+L GLGARDSL
Sbjct: 243 TRTGYTGEDGFEISVPVPGTLKLVEDLVGDANVRLCGLGARDSL 286
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSG 69
GK RR+T FPG I+ QI+ GV ++R GF G P R +I + + + VG I+SG
Sbjct: 315 GKARRDTFSFPGGERIRKQIEEGVPQRRVGFEFLEKGAPARQHSKILDMDGKEVGEISSG 374
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP L KNIAMGY+ A +K G E+ V R K+ V KMPFV + YY P
Sbjct: 375 GFSPVLGKNIAMGYVPKALAKAGTEVQVETRGKKTKAVVKKMPFVNTTYYKP 426
>gi|134142796|gb|ABO61732.1| mitochondrial glycine decarboxylase complex T-protein [Populus
tremuloides]
Length = 408
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 154/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 31 ASEAEMKKTVLYDFHVANGGKMVPFAGWSMPIQY-KDSIMESTVNCRQNGSLFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK +D +++V NA
Sbjct: 90 FSLKGKDCVPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVTDDHMYIVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ D+ + A FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +Y
Sbjct: 150 GCKDKDLAHIEAHMKSFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKVY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G+ C + R GYTGEDG EISVP E + +A L S+ V+L GLGARD
Sbjct: 208 FGEFRITDINGVRCFINRTGYTGEDGFEISVPSENAVDLAKATLEKSEGKVRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q+ G + GF+STG P R EI + +G ITSG
Sbjct: 298 GKRRKAEGGFLGAEVILKQLAEGPKIRLVGFSSTGPPPRSHSEIQDEKGTSIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ + K G + + VR K D VTK PFV + YY P
Sbjct: 358 SPCLKKNIAMGYVKSGFHKSGTKAKILVRGKAYDGVVTKKPFVPTKYYKP 407
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +YF R I G+ C +
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKVYFGEFRITDINGVRCFI 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
R GYTGEDG EISVP E + +A L S+ V+L GLGARDSL
Sbjct: 224 NRTGYTGEDGFEISVPSENAVDLAKATLEKSEGKVRLTGLGARDSL 269
>gi|118486291|gb|ABK94987.1| unknown [Populus trichocarpa]
Length = 408
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+ MP+QY SI S ++ R S+FDVSHM
Sbjct: 31 ASEAELKKTVLYDFHVANGGKMVPFAGWGMPIQY-KDSIMESTVNCRQNGSLFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK D +++V NA
Sbjct: 90 LSLKGKDCIPFLEKLVIADVAALAPGTGTLTVFTNEKGGAIDDSVITKVQNDHMYIVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPLS+++LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLSASVLQHLTKDDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C +TR GYTGEDG EISVP E + +A+L S+ ++L GLGARD
Sbjct: 208 FGEFRITDINGAYCFITRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKIRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 64/110 (58%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q+ G + GFTSTG P R EI + +G ITSG
Sbjct: 298 GKRRKAEGGFLGAEVILKQLAEGPKIRLVGFTSTGPPPRSHSEIQDEKGTNIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G + + VR K D VTK PFV + YY P
Sbjct: 358 SPCLKKNIAMGYVKSGSHKAGTKAKILVRGKAYDGVVTKKPFVPTKYYKP 407
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPLS+++LQ T DLS LYF R I G C +
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLSASVLQHLTKDDLSKLYFGEFRITDINGAYCFI 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ ++L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKIRLTGLGARDSL 269
>gi|255640227|gb|ACU20404.1| unknown [Glycine max]
Length = 407
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 155/242 (64%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T +YD H+++GGKMVPFAG+SMP+QY SI S L+ R S+FDVSHM
Sbjct: 30 ASDAELKKTVVYDFHVANGGKMVPFAGWSMPIQY-KDSIMDSTLNCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDSVPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVKDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKADLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F + I G+ C LTR GYTGEDG EIS+P E + +A+L S+ ++L GLGARD
Sbjct: 207 FGGFQVLDINGVQCFLTRTGYTGEDGFEISIPSESAVDLAKAILEKSEGKIRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R GF S+G P R EI + +G +TSG
Sbjct: 297 GKRRRAEGGFLGADVILKQLEEGPKIRRVGFFSSGPPPRSHSEIQDEGGNNIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIA+GY++ K G ++ + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKFNEGVVTKMPFVPTKYYKP 406
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +YF + I G+ C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKADLSKMYFGGFQVLDINGVQCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EIS+P E + +A+L S+ ++L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISIPSESAVDLAKAILEKSEGKIRLTGLGARDSL 268
>gi|356531975|ref|XP_003534551.1| PREDICTED: LOW QUALITY PROTEIN: aminomethyltransferase,
mitochondrial-like [Glycine max]
Length = 407
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 155/242 (64%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T +YD H+++GGKMVPFAG+SMP+QY SI S L+ R S+FDVSHM
Sbjct: 30 ASDAELKKTVVYDFHVANGGKMVPFAGWSMPIQY-KDSIMDSTLNCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDSVPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVKDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKADLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F + I G+ C LTR GYTGEDG EIS+P E + +A+L S+ ++L GLGARD
Sbjct: 207 FGGFQVLDINGVQCFLTRTGYTGEDGFEISIPSESAVDLAKAILEKSEGKIRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R GF S+G P R EI + +G +TSG
Sbjct: 297 GKRRRAEGGFLGADVILKQLEEGPKIRRVGFFSSGPPPRSHSEIQDEGGNNIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIA+GY++ K G ++ + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKSNEGVVTKMPFVPTKYYKP 406
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +YF + I G+ C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKADLSKMYFGGFQVLDINGVQCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EIS+P E + +A+L S+ ++L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISIPSESAVDLAKAILEKSEGKIRLTGLGARDSL 268
>gi|388510246|gb|AFK43189.1| unknown [Lotus japonicus]
Length = 407
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 151/242 (62%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+ +GGKMVPFAG+SMP+QY SI S L+ R S+FDVSHM
Sbjct: 30 ASEAELKKTALYDFHVVNGGKMVPFAGWSMPIQY-KDSIMDSTLNCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDAVPFLEKLVIADVASLAPGTGSLTVFTNEKGGAIDDSVITKVADDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL+ +LQ T DLS Y
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAGPVLQHLTKDDLSKFY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ ++L GLGARD
Sbjct: 207 FGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSENALDLTKAILEKSEGKIRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+ G +R GF S+G P R E+ + +G +TSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQLAEGPKIRRVGFFSSGPPPRSHSEVQDEGGNNIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G ++ + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAMGYVKSGLHKAGTKVKIIIRGKANEGVVTKMPFVPTKYYKP 406
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL+ +LQ T DLS YF R I G C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAGPVLQHLTKDDLSKFYFGEFRVLDINGSQCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ ++L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENALDLTKAILEKSEGKIRLTGLGARDSL 268
>gi|403825481|gb|ABW76098.2| glycine cleavage complex T protein [Trimastix pyriformis]
Length = 410
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 154/240 (64%), Gaps = 2/240 (0%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS A ++TP YDLH+ GG + F G+ +P++Y I H++TR K ++FDVSHM Q
Sbjct: 18 SSHVATKKTPFYDLHMKFGGDVTDFCGYYLPIKYANSDIGIEHMNTRKKCTIFDVSHMGQ 77
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
++G REE++E + VADV L LS+FTN +GGI DD++ TK + L+LV NA
Sbjct: 78 FRLSGAGREEFMERLIVADVRGLSTWSTKLSVFTNYRGGISDDMMCTKC-PNHLYLVVNA 136
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ ++ D + + D +K + ++ LS RGL+A+QGP + +LQR+T+++L+
Sbjct: 137 ACKEKDWNHIQHHLDLWKQDFPALRIEDLS-NARGLLAIQGPNAMKVLQRYTNVNLAEQP 195
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM+ R IAG+ C +TR GYTGEDG EIS+P +QC + E L D DV AGLG+RDSL
Sbjct: 196 FMSQRHGKIAGVDCFITRCGYTGEDGFEISIPKDQCMRLGEVLTRDRDVTPAGLGSRDSL 255
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
RGL+A+QGP + +LQR+T+++L+ FM+ R IAG+ C +TR GYTGEDG EIS+P
Sbjct: 169 RGLLAIQGPNAMKVLQRYTNVNLAEQPFMSQRHGKIAGVDCFITRCGYTGEDGFEISIPK 228
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
+QC + E L D DV AGLG+RDSL
Sbjct: 229 DQCMRLGEVLTRDRDVTPAGLGSRDSL 255
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRK--RTGF-TSTGVPIRPGYEIFNAND-QRVGAITS 68
K+R+E GGF G +I QI+ + R G +G P R +++ ++VG + S
Sbjct: 285 KKRQEQGGFLGDDVILQQIRGERPLRFMRCGLEIKSGAPAREQTAVYDFQGLKQVGEVRS 344
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRKVK 128
G +PSL +A ++ P++ + G EL VRVR + + V +MPFVK +Y PK K
Sbjct: 345 GLFAPSLGHPVAQAWMLPSHMEPGTELKVRVRGRFQNAVVREMPFVKKPFYRVPKKMAAK 404
Query: 129 K 129
K
Sbjct: 405 K 405
>gi|17017279|gb|AAL33597.1| glycine cleavage complex T-protein [Zea mays]
Length = 401
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDV+HM
Sbjct: 30 ASEADLKKTALYDFHVANGGKMVPFAGWSMPIQY-KDSIMDSTINCRENGSLFDVAHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + V D+ L PG GTLS+ TNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDCIPFLEKLVVGDIAGLAPGTGTLSVLTNEKGGAIDDTVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R+ D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +Y
Sbjct: 149 GCREKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSQVY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F I G PC LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGQFTFLDINGFPCYLTRTGYTGEDGFEISVPNEYAVDLAKAMLEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 64/103 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI G ++R GF S+G P R EI N + +G ITSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQIADGPPQRRVGFISSGPPARGHSEIQNEKGESIGEITSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFV 114
SP LKKNIAMGY++ K G ++ + VR K + VTKMPFV
Sbjct: 357 SPCLKKNIAMGYVKSGNHKAGTKVNILVRGKPYEGVVTKMPFV 399
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +YF I G PC L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSQVYFGQFTFLDINGFPCYL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPNEYAVDLAKAMLEKSEGKVRLTGLGARDSL 268
>gi|297844036|ref|XP_002889899.1| hypothetical protein ARALYDRAFT_471331 [Arabidopsis lyrata subsp.
lyrata]
gi|297335741|gb|EFH66158.1| hypothetical protein ARALYDRAFT_471331 [Arabidopsis lyrata subsp.
lyrata]
Length = 408
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 155/242 (64%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDV+HM
Sbjct: 31 ASEADLKKTALYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTVNCRQNGSLFDVAHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE++ VADV L PG G+L++FTNE+GG DD ++TK ++ ++LV NA
Sbjct: 90 LSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F + I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 208 FGQFQILDINGSTCFLTRTGYTGEDGFEISVPDEHAVDLAKAILEKSEGKVRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+K G + +R GF S+G P R E+ + + ++G ITSG
Sbjct: 298 GKRRRAEGGFLGADVILQQLKDGPTIRRVGFFSSGPPARSHSEVHDESGNKIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP+LKKNIAMGY++ K G ++ + VR K + +TKMPFV + YY P
Sbjct: 358 SPNLKKNIAMGYVKSGQHKTGTKVKILVRGKPYEGSITKMPFVATKYYKP 407
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF + I G C L
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGQFQILDINGSTCFL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPDEHAVDLAKAILEKSEGKVRLTGLGARDSL 269
>gi|308808814|ref|XP_003081717.1| unnamed protein product [Ostreococcus tauri]
gi|116060183|emb|CAL56242.1| unnamed protein product [Ostreococcus tauri]
Length = 421
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
SA +RTPLYD+H++ GGK+V FAG+++P+QYG SI + H R+ S+FDVSHML + +
Sbjct: 45 SALKRTPLYDVHVARGGKLVDFAGYALPIQYGD-SIMEATQHCRTNASLFDVSHMLGSSI 103
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
GK +LES+ VAD+ L G GTLS+ TNE+GGI DD ++TK + ++V NA
Sbjct: 104 RGKDATAFLESLVVADLKGLKNGTGTLSVMTNEKGGIIDDTVITKINDHDYYVVLNAGCA 163
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D + A + K+ G D+ F+ R L+A QGP + +LQR TD DLS LYF
Sbjct: 164 EKDQKHINAHLAKAKANGMDV--DFIVHSNRSLLAFQGPKTMEVLQRFTDFDLSKLYFGM 221
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G +TR GYTGEDG EISVP E + EAL +V+ A LG RDSL
Sbjct: 222 FTEMTVNGGKVWVTRTGYTGEDGFEISVPNEDAVKLAEALEGQPEVRFAALGPRDSL 278
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 59/103 (57%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K+ + + F+ R L+A QGP + +LQR TD DLS LYF T+ G +T
Sbjct: 176 KAKANGMDVDFIVHSNRSLLAFQGPKTMEVLQRFTDFDLSKLYFGMFTEMTVNGGKVWVT 235
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R GYTGEDG EISVP E + EAL +V+ A LG RDSL
Sbjct: 236 RTGYTGEDGFEISVPNEDAVKLAEALEGQPEVRFAALGPRDSL 278
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVS--RKRTG--FTSTGVPIRPGYEIFNANDQRVGAIT 67
GK RRE F G II+ Q+++ S ++R G FT G P R I + + +G +T
Sbjct: 307 GKARREKCDFVGGEIIKKQLENPASIPQRRVGLTFTGKGAPARQHSIILDMDGNTIGEVT 366
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SG SP L+KNIAMGY+ A++K G E+ V R KR +KMPFV + YY P
Sbjct: 367 SGGFSPVLQKNIAMGYVAKAFAKAGTEVQVETRGKRTAAVTSKMPFVNTTYYKP 420
>gi|356522011|ref|XP_003529643.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Glycine max]
Length = 407
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T +D H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEAELKKTVFHDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTINCRQNGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDAVPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS L+
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLF 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGLDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R GF S+G P R EI + +G ITSG
Sbjct: 297 GKRRRAEGGFLGADVILKQLEEGPKIRRVGFFSSGPPPRSHSEIQDEGGNNIGEITSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP L+KNIAMGY++ K G ++ + +R K + +TKMPFV + YY P
Sbjct: 357 SPCLQKNIAMGYVKSGLHKAGTKVKIIIRGKPNEGVLTKMPFVPTKYYKP 406
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS L+F R I G C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLFFGEFRVLDINGSQCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSEHGLDLAKAILEKSEGKVRLTGLGARDSL 268
>gi|255647916|gb|ACU24416.1| unknown [Glycine max]
Length = 407
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T +D H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEAELKKTVFHDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTINCRQNGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDAVPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS L+
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLF 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGLDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R GF S+G P R EI + +G ITSG
Sbjct: 297 GKRRRAEGGFLGADVILKQLEEGPKIRRVGFFSSGPPPRSHSEIQDEGGNNIGEITSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP L+KNIAMGY++ K G ++ + +R K + +TKMPFV + YY P
Sbjct: 357 SPCLQKNIAMGYVKFGLHKAGTKVKIIIRGKPNEGVLTKMPFVPTKYYKP 406
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS L+F R I G C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLFFGEFRVLDINGSQCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSEHGLDLAKAILEKSEGKVRLTGLGARDSL 268
>gi|193788312|dbj|BAG53206.1| unnamed protein product [Homo sapiens]
Length = 355
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 148/223 (66%), Gaps = 11/223 (4%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G R + +ES+ V D+
Sbjct: 1 MVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGSDRVKLMESLVVGDIA 59
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSL- 330
EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D+ LM QD+ + L
Sbjct: 60 ELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDLALM---QDKVRELQ 116
Query: 331 --GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLT 387
G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS + G+ C +T
Sbjct: 117 NQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAVMEVFGVSGCRVT 173
Query: 388 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
R GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 174 RCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 216
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 245 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 304
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 305 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 353
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 105 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 161
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 162 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 216
>gi|119585389|gb|EAW64985.1| hCG2001997, isoform CRA_b [Homo sapiens]
Length = 338
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 148/223 (66%), Gaps = 11/223 (4%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G R + +ES+ V D+
Sbjct: 1 MVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGSDRVKLMESLVVGDIA 59
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSL- 330
EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D+ LM QD+ + L
Sbjct: 60 ELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDLALM---QDKVRELQ 116
Query: 331 --GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLT 387
G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS + G+ C +T
Sbjct: 117 NQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAVMEVFGVSGCRVT 173
Query: 388 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
R GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 174 RCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 216
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 245 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 304
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRV 99
SPSLKKN+AMGY+ YS+ G L V +
Sbjct: 305 SPSLKKNVAMGYVPCEYSRPGTMLLVEL 332
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 105 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 161
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 162 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 216
>gi|66801565|ref|XP_629708.1| hypothetical protein DDB_G0292326 [Dictyostelium discoideum AX4]
gi|74851073|sp|Q54DD3.1|GCST_DICDI RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|60463092|gb|EAL61287.1| hypothetical protein DDB_G0292326 [Dictyostelium discoideum AX4]
Length = 403
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 154/249 (61%), Gaps = 13/249 (5%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS + ++T L +LH G KMVPF G+ MPVQY A + HLH R + +FDVSHM Q
Sbjct: 19 SSSNELKKTALNELHKELGAKMVPFCGWEMPVQYPA-GVMKEHLHVRKESGLFDVSHMGQ 77
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK R ++ ESI VAD+ L G LS+FTNE+GGI DD ++T DSL++V NA
Sbjct: 78 LRIHGKDRVKFFESIVVADLQALPTGHSKLSVFTNEKGGIIDDTMITNA-GDSLYVVVNA 136
Query: 311 SRRKVDMDLMVAAQDRFKSLG--KDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDLS 367
D+ + FKS+ D+ +Q L E+ LIA+QGP + +ILQ+ D D++
Sbjct: 137 GCADKDISHINEKIKEFKSVNPTHDVSMQLL--EDLSLIAIQGPTTESILQKFVKDQDIT 194
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED------VKL 421
++ FMT RP TIAGI C +TR GYTGEDG EISVP +Q + E L+ + +K
Sbjct: 195 NMEFMTQRPMTIAGIDCIVTRCGYTGEDGFEISVPSKQAVRLAELFLATSNASIESGIKP 254
Query: 422 AGLGARDSL 430
AGLGARDSL
Sbjct: 255 AGLGARDSL 263
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 11/114 (9%)
Query: 451 RFKSLG--KDIHLQFLSPEERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGI 507
FKS+ D+ +Q L E+ LIA+QGP + +ILQ+ D D++++ FMT RP TIAGI
Sbjct: 152 EFKSVNPTHDVSMQLL--EDLSLIAIQGPTTESILQKFVKDQDITNMEFMTQRPMTIAGI 209
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED------VKLAGLGARDSL 555
C +TR GYTGEDG EISVP +Q + E L+ + +K AGLGARDSL
Sbjct: 210 DCIVTRCGYTGEDGFEISVPSKQAVRLAELFLATSNASIESGIKPAGLGARDSL 263
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Query: 13 KRRRETGGFPGASIIQSQI-KSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
KRRRE GGFPGASIIQ Q+ K G +KR G G P R G I + + +Q +G +TSG
Sbjct: 293 KRRREEGGFPGASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSGT 352
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SP +++I+M Y++ +SK+G ++ V +R K + ++KMPFV +NY
Sbjct: 353 ISPITRQSISMAYVKTPFSKIGTQVNVSIRGKPITATISKMPFVPTNY 400
>gi|226502434|ref|NP_001145825.1| uncharacterized protein LOC100279332 [Zea mays]
gi|195639442|gb|ACG39189.1| aminomethyltransferase [Zea mays]
gi|219884573|gb|ACL52661.1| unknown [Zea mays]
gi|414585372|tpg|DAA35943.1| TPA: aminomethyltransferase [Zea mays]
Length = 409
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 149/236 (63%), Gaps = 5/236 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H++HGGKMVPFAG+SMP+QY SI S ++ R+ S+FDV+HM + G+
Sbjct: 38 KRTALYDFHVAHGGKMVPFAGWSMPIQY-RDSIMDSTVNCRANGSLFDVAHMCGLSLKGR 96
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LES+ VADV L G GTL++FTNEQGG DD ++ K + ++LV NA R D
Sbjct: 97 GAIPFLESLVVADVAALRDGTGTLTVFTNEQGGAIDDSVIAKVTDHHIYLVVNAGCRDKD 156
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A + F G D+ ++R L+A+QGPL++ LQ T DLS +YF +
Sbjct: 157 LAHIEAHMEAFNKKGGDVKWHI--HDDRSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKM 214
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
I G C LTR GYTGEDG EISVP E + EA+L S+ V+L GLGARDSL
Sbjct: 215 IDINGYACFLTRTGYTGEDGFEISVPSENAVDLAEAILERSEGKVRLTGLGARDSL 270
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 68/110 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R G + G P R E+ + + +R+G +TSG
Sbjct: 299 GKRRRAEGGFLGADVILKQLQEGPKIRRVGMVTQGPPARSHSELVSGSGERIGEVTSGGF 358
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G EL V VR K D VTKMPFV + YY P
Sbjct: 359 SPCLKKNIAMGYVKSGMHKAGTELKVVVRGKSYDAVVTKMPFVPTKYYKP 408
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ F G D+ ++R L+A+QGPL++ LQ T DLS +YF + I G C
Sbjct: 165 EAFNKKGGDVKWHI--HDDRSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGYAC 222
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
LTR GYTGEDG EISVP E + EA+L S+ V+L GLGARDSL
Sbjct: 223 FLTRTGYTGEDGFEISVPSENAVDLAEAILERSEGKVRLTGLGARDSL 270
>gi|3334202|sp|P93256.1|GCST_MESCR RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
Flags: Precursor
gi|1724108|gb|AAB38502.1| aminomethyltransferase precursor [Mesembryanthemum crystallinum]
Length = 408
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 151/242 (62%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDV+HM
Sbjct: 31 ASEADLKKTALYDFHVANGGKMVPFAGWSMPIQY-KDSIMDSTINCRENGSLFDVAHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + V D+ L PG GTLS+ TNE+GG DD ++TK +D ++LV NA
Sbjct: 90 LSLKGKDCIPFLEKLVVGDIAGLAPGTGTLSVLTNEKGGAIDDTVITKVTDDHIYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R+ D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS Y
Sbjct: 150 GCREKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKFY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F I G PC LTR GYTGEDG EISVP E + +A+L S+ V+L G GARD
Sbjct: 208 FGQFTFLDINGFPCYLTRTGYTGEDGFEISVPNEYAVDLAKAMLEKSEGKVRLTGRGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 68/111 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI G ++R GF S+G P R EI N + +G ITSG
Sbjct: 298 GKRRRAEGGFLGAEVILKQIADGPPQRRVGFISSGPPARGHSEIQNEKGESIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
SP LKKNIAMGY++ K G ++ + VR K + VTKMPFV + YY P
Sbjct: 358 SPCLKKNIAMGYVKSGNHKAGTKVNILVRGKPYEGVVTKMPFVPTKYYKSP 408
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS YF I G PC L
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKFYFGQFTFLDINGFPCYL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L G GARDSL
Sbjct: 224 TRTGYTGEDGFEISVPNEYAVDLAKAMLEKSEGKVRLTGRGARDSL 269
>gi|102139787|gb|ABF69972.1| aminomethyltransferase, mitochondrial (glycine cleavage system T
protein), putative [Musa acuminata]
Length = 424
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/260 (44%), Positives = 156/260 (60%), Gaps = 16/260 (6%)
Query: 184 TFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVF 243
F +P + ++T L+D H+ HGGKMVPFAG+SMP+QY SI S LH R+ +F
Sbjct: 28 AFATAPAAETVELKKTALHDFHVEHGGKMVPFAGWSMPLQY-KDSIMDSTLHCRAAAGLF 86
Query: 244 DVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS 303
DVSHM + G+ +LE++ +ADV L PG GTL++FTNE+GG DD +VTK +D
Sbjct: 87 DVSHMCGLSLRGRDCAPFLETLVIADVAGLRPGTGTLTVFTNERGGAIDDSVVTKVGDDH 146
Query: 304 LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD 363
++LV NA R D+ + A + FK+ G D+ +ER L+A+QGP+++ +LQ
Sbjct: 147 IYLVVNAGCRDKDLAHIGAHLEAFKAKGGDVEWHI--HDERSLLALQGPMAAPVLQLLMK 204
Query: 364 LDLSSLYFMTSRPCTIAGIPCTLTRAG-----------YTGEDGVEISVPGEQCTHIVEA 412
DLS +YF R I G C LTR G YTGEDG EISVP E + +A
Sbjct: 205 DDLSKIYFGEFRTLNINGAHCFLTRTGNPVSNLPEIISYTGEDGFEISVPSEHAVDLTKA 264
Query: 413 LL--SDEDVKLAGLGARDSL 430
+L S+ V+L GLGARDSL
Sbjct: 265 ILEKSEGKVRLTGLGARDSL 284
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAN-DQRVGAITSGC 70
GKRRR GGF GA +I Q++ G +R GF S G P R EI +++ +++G +TSG
Sbjct: 313 GKRRRAEGGFLGAEVILKQLQEGPPVRRVGFFSNGPPPRSHSEILSSSSGEKIGEVTSGG 372
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ + K G E+ + +R K D VTKMPFV + YY P
Sbjct: 373 FSPCLKKNIAMGYVKSGFHKPGTEVKIVIRGKANDGIVTKMPFVPTKYYKP 423
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 15/119 (12%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ FK+ G D+ +ER L+A+QGP+++ +LQ DLS +YF R I G C
Sbjct: 168 EAFKAKGGDVEWHI--HDERSLLALQGPMAAPVLQLLMKDDLSKIYFGEFRTLNINGAHC 225
Query: 510 TLTRAG-----------YTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
LTR G YTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 226 FLTRTGNPVSNLPEIISYTGEDGFEISVPSEHAVDLTKAILEKSEGKVRLTGLGARDSL 284
>gi|255080476|ref|XP_002503818.1| glycine cleavage system t-protein [Micromonas sp. RCC299]
gi|226519085|gb|ACO65076.1| glycine cleavage system t-protein [Micromonas sp. RCC299]
Length = 412
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 147/233 (63%), Gaps = 3/233 (1%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LYD HL GGKMVPFAG SMP+QY SI + H RSK S+FDVSHML + + GK
Sbjct: 41 KTALYDFHLEMGGKMVPFAGHSMPIQY-KDSIMEATQHCRSKASIFDVSHMLGSSMRGKD 99
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E++ESI V D+ L G GTLS+ TN++GGI DD +VTK ++ +++V N + + D
Sbjct: 100 AIEFVESIVVGDIRGLKNGTGTLSVVTNDKGGIIDDTVVTKVNDEDVYIVLNGACSEKDQ 159
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ FK+ GKD +F+ +R L+A QGP + +LQ TD+DLS LYF
Sbjct: 160 AHINKHLKAFKAKGKDC--EFIVHGDRSLLAFQGPKAVDVLQPLTDIDLSKLYFGMFTET 217
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+IAG P LTR GYTGEDG EIS+ + + LL + D ++ GLGARDSL
Sbjct: 218 SIAGKPVWLTRTGYTGEDGFEISLKKTDTVALTKKLLENPDARMCGLGARDSL 270
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ GKD +F+ +R L+A QGP + +LQ TD+DLS LYF +IAG P L
Sbjct: 169 FKAKGKDC--EFIVHGDRSLLAFQGPKAVDVLQPLTDIDLSKLYFGMFTETSIAGKPVWL 226
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TR GYTGEDG EIS+ + + LL + D ++ GLGARDSL
Sbjct: 227 TRTGYTGEDGFEISLKKTDTVALTKKLLENPDARMCGLGARDSL 270
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 12 GKRRRETGGFPGASIIQSQIK--SGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITS 68
GK RRE F G +I++Q++ + V+++R G G P R G +I + VG +TS
Sbjct: 299 GKSRREKCDFVGGDVIKAQLETPASVTKRRIGLKVGKGAPARAGSKILAPDGAEVGEVTS 358
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
G SP L++NIAMGY+ +++K G EL V R ++ + TKMPFV +Y+ P
Sbjct: 359 GGFSPVLQENIAMGYVLKSHAKAGTELQVETRGRKSEAVATKMPFVTCHYHRP 411
>gi|357166054|ref|XP_003580582.1| PREDICTED: aminomethyltransferase, mitochondrial-like [Brachypodium
distachyon]
Length = 411
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 149/236 (63%), Gaps = 5/236 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H++HGGKMVPFAG+SMP+QY SI S L+ R+ S+FDVSHM + G
Sbjct: 38 KKTALYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTLNCRANGSLFDVSHMCGLSLHGS 96
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE++ VADV L G G+L++FTNE+GG DD +VTK + ++LV NA R D
Sbjct: 97 QAIPFLETLVVADVAALKDGTGSLTVFTNEKGGAIDDSVVTKVTDKHVYLVVNAGCRDKD 156
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A + F G D+ +ER L+A+QGPL++ LQ T DLS +YF +
Sbjct: 157 LAHIGAHMEAFNKKGGDVKWHI--HDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKM 214
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
I G C LTR GYTGEDG EISVP E + +ALL S+ V+L GLGARDSL
Sbjct: 215 IDINGSACFLTRTGYTGEDGFEISVPSENALDLAKALLEKSEGKVRLTGLGARDSL 270
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAND--QRVGAITSG 69
GKRRR GGF GA +I Q+K G +R G S G P R I + + + +G +TSG
Sbjct: 299 GKRRRAEGGFLGAEVILKQLKEGPKIRRVGIFSQGPPPRSHSAIVSGDGSGENIGEVTSG 358
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
SP LKKNIAMGY++ K G E V VR K D VTKMPFV + YY P
Sbjct: 359 GFSPCLKKNIAMGYVKSGLHKAGTEFKVVVRGKSYDAVVTKMPFVPTKYYKAP 411
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ F G D+ +ER L+A+QGPL++ LQ T DLS +YF + I G C
Sbjct: 165 EAFNKKGGDVKWHI--HDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGSAC 222
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
LTR GYTGEDG EISVP E + +ALL S+ V+L GLGARDSL
Sbjct: 223 FLTRTGYTGEDGFEISVPSENALDLAKALLEKSEGKVRLTGLGARDSL 270
>gi|215708742|dbj|BAG94011.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 409
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 177/301 (58%), Gaps = 24/301 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H++HGGKMVPFAG+SMP+QY +I S L+ R+ S+FDVSHM + G+
Sbjct: 37 KKTALYDFHVAHGGKMVPFAGWSMPIQY-KDTIMDSTLNCRANGSLFDVSHMCGLSLHGR 95
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LES+ VADV L G GTL++FTN++GG DD +VTK + ++LV NA R D
Sbjct: 96 QAIPFLESLVVADVAALKDGTGTLTVFTNDRGGAIDDSVVTKVTDQHIYLVVNAGCRDKD 155
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + F G D+ ++ +ER L+A+QGPL++ LQ T DLS +YF +
Sbjct: 156 LAHIGEHMEAFNKKGGDV--KWHVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKM 213
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSLSGDI 434
I G C LTR GYTGEDG EISVP E + +ALL S+ V+L GLGARDSL +
Sbjct: 214 IDINGYACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGKVRLTGLGARDSLRLEA 273
Query: 435 TLN----------TPVPHGSLKLSNDRFKS----LGKDIHLQFLS--PEER--GLIAVQG 476
L TPV G R K+ LG D+ L+ L P+ R GL++ QG
Sbjct: 274 GLCLYGNDMEQHITPVEAGLSWAIGKRRKAEGGFLGADVILKQLQEGPKIRRVGLLS-QG 332
Query: 477 P 477
P
Sbjct: 333 P 333
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q++ G +R G S G P R EI + + + +G +TSG
Sbjct: 298 GKRRKAEGGFLGADVILKQLQEGPKIRRVGLLSQGPPPRSHSEIVSNSGENIGEVTSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G E V VR K D VTKMPFV + YY P
Sbjct: 358 SPCLKKNIAMGYVKSGLHKAGTEFKVVVRGKSYDAVVTKMPFVPTKYYKP 407
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ F G D+ ++ +ER L+A+QGPL++ LQ T DLS +YF + I G C
Sbjct: 164 EAFNKKGGDV--KWHVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGYAC 221
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
LTR GYTGEDG EISVP E + +ALL S+ V+L GLGARDSL
Sbjct: 222 FLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGKVRLTGLGARDSL 269
>gi|115460656|ref|NP_001053928.1| Os04g0623800 [Oryza sativa Japonica Group]
gi|38344172|emb|CAE03503.2| OSJNBa0053K19.11 [Oryza sativa Japonica Group]
gi|113565499|dbj|BAF15842.1| Os04g0623800 [Oryza sativa Japonica Group]
gi|116309756|emb|CAH66799.1| H0215F08.10 [Oryza sativa Indica Group]
Length = 408
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 177/301 (58%), Gaps = 24/301 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H++HGGKMVPFAG+SMP+QY +I S L+ R+ S+FDVSHM + G+
Sbjct: 37 KKTALYDFHVAHGGKMVPFAGWSMPIQY-KDTIMDSTLNCRANGSLFDVSHMCGLSLHGR 95
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LES+ VADV L G GTL++FTN++GG DD +VTK + ++LV NA R D
Sbjct: 96 QAIPFLESLVVADVAALKDGTGTLTVFTNDRGGAIDDSVVTKVTDQHIYLVVNAGCRDKD 155
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + F G D+ ++ +ER L+A+QGPL++ LQ T DLS +YF +
Sbjct: 156 LAHIGEHMEAFNKKGGDV--KWHVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKM 213
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSLSGDI 434
I G C LTR GYTGEDG EISVP E + +ALL S+ V+L GLGARDSL +
Sbjct: 214 IDINGYACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGKVRLTGLGARDSLRLEA 273
Query: 435 TLN----------TPVPHGSLKLSNDRFKS----LGKDIHLQFLS--PEER--GLIAVQG 476
L TPV G R K+ LG D+ L+ L P+ R GL++ QG
Sbjct: 274 GLCLYGNDMEQHITPVEAGLSWAIGKRRKAEGGFLGADVILKQLQEGPKIRRVGLLS-QG 332
Query: 477 P 477
P
Sbjct: 333 P 333
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q++ G +R G S G P R EI + + + +G +TSG
Sbjct: 298 GKRRKAEGGFLGADVILKQLQEGPKIRRVGLLSQGPPPRSHSEIVSNSGENIGEVTSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G E V VR K D VTKMPFV + YY P
Sbjct: 358 SPCLKKNIAMGYVKSGLHKAGTEFKVVVRGKSYDAVVTKMPFVPTKYYKP 407
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ F G D+ ++ +ER L+A+QGPL++ LQ T DLS +YF + I G C
Sbjct: 164 EAFNKKGGDV--KWHVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGYAC 221
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
LTR GYTGEDG EISVP E + +ALL S+ V+L GLGARDSL
Sbjct: 222 FLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGKVRLTGLGARDSL 269
>gi|326521632|dbj|BAK00392.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 5/236 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H++HGGKMVPFAG+SMP+QY +I S L+ R+ S+FDVSHM + G+
Sbjct: 42 KKTALYDFHVAHGGKMVPFAGWSMPIQY-KDTIMDSTLNCRANGSLFDVSHMCGLSLQGR 100
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LES+ VADV L G G+L++FTN++GG DD +VTK + ++LV NA R D
Sbjct: 101 QAIPFLESLVVADVAALKDGTGSLTVFTNDKGGAIDDSVVTKVNDHHVYLVVNAGCRDKD 160
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A + F+ G D+ ++ +ER L+A+QGPL++ LQ T DLS +YF +
Sbjct: 161 LAHIGAHMEAFQKKGGDV--KWHVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKM 218
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
I G C LTR GYTGEDG EISVP E + +ALL S+ V+L GLGARDSL
Sbjct: 219 IDINGSACFLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGKVRLTGLGARDSL 274
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 66/111 (59%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+K G +R G S G P R EI + + +G +TSG
Sbjct: 303 GKRRRAEGGFLGAEVILKQLKEGPKIRRVGIFSQGPPPRSHSEIVSGAGENIGEVTSGGF 362
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
SP LKKNIAMGY++ K G E V VR K+ D VTKMPFV + YY P
Sbjct: 363 SPCLKKNIAMGYVKNGLHKAGTEFKVVVRGKQYDAVVTKMPFVPTKYYKAP 413
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ F+ G D+ ++ +ER L+A+QGPL++ LQ T DLS +YF + I G C
Sbjct: 169 EAFQKKGGDV--KWHVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGSAC 226
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
LTR GYTGEDG EISVP E + +ALL S+ V+L GLGARDSL
Sbjct: 227 FLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGKVRLTGLGARDSL 274
>gi|225444472|ref|XP_002272701.1| PREDICTED: aminomethyltransferase, mitochondrial [Vitis vinifera]
Length = 408
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 154/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 31 ASEAELKKTVLYDFHIANGGKMVPFAGWSMPIQY-KDSIMDSTVNCRENGSLFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG GTL++FTNE+GG DD ++TK ++ ++LV NA
Sbjct: 90 LSLKGKDCIPFLEKLVIADVAGLAPGTGTLTVFTNEKGGAIDDSVITKVKDNHIYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + +KS G D+ +ER L+A+QGPL++ +LQ T DLS L+
Sbjct: 150 GCRDKDLAHIEEHMKAYKSKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLF 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F + I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 208 FGEFQILDINGATCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G S +R GF S+G P R EI + +G ITSG
Sbjct: 298 GKRRRAEGGFLGAEVILKQLEEGPSVRRVGFFSSGPPARSHSEIQDDKGNNIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNI MGY++ K G ++ + +R K D VTKMPFV + YY P
Sbjct: 358 SPCLKKNIGMGYVKSGSHKAGTKVKILIRGKPYDGVVTKMPFVPTKYYKP 407
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
+KS G D+ +ER L+A+QGPL++ +LQ T DLS L+F + I G C L
Sbjct: 166 YKSKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLFFGEFQILDINGATCFL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 269
>gi|320163428|gb|EFW40327.1| glycine cleavage system protein T [Capsaspora owczarzaki ATCC
30864]
Length = 408
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 151/238 (63%), Gaps = 8/238 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H++ GGKMVPFAG+ MPVQY + I ASH HTR S+FDVSHMLQ + G
Sbjct: 36 KRTALYDFHVAKGGKMVPFAGWDMPVQYSDLGIIASHHHTRENASLFDVSHMLQFRLHGA 95
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R ++LES+ VADV L TLS+FTNE+GGI DD +++ + +L++VSNA D
Sbjct: 96 QRVQFLESLVVADVAGLAETAATLSVFTNEKGGIIDDTVISNAGQ-TLYVVSNAGCADKD 154
Query: 317 MDLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTS 374
+ + A RF + K D+ LQ + E L+A+QGP ++ LQ DLS L FM
Sbjct: 155 LAHLNAQLARFNAEKKADVRLQIV---ETALLALQGPKAAAALQALVPSKDLSKLPFMHG 211
Query: 375 -RPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+ C +TR GYTGEDG EIS+P + I E LL++ VKLAGLG RDSL
Sbjct: 212 VDGVTVDGVANCRVTRCGYTGEDGFEISIPNQHAVQIAEKLLTNPAVKLAGLGPRDSL 269
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGC 70
KRRRE GGF G +I Q+K GVSR R G + G R +I A+ + +G +TSGC
Sbjct: 298 AKRRREQGGFLGDKVILQQLKDGVSRTRIGLVADVGPAARQHSKILTADGEVIGEVTSGC 357
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
PSPS +KN+A+GY+ PA+SK G L V VR K+ V+KMPFV + YY P
Sbjct: 358 PSPSAQKNVAIGYVPPAFSKNGTALQVEVRGKKYPAVVSKMPFVPTRYYKP 408
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
Query: 451 RFKSLGK-DIHLQFLSPEERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTS-RPCTIAGI 507
RF + K D+ LQ + E L+A+QGP ++ LQ DLS L FM T+ G+
Sbjct: 164 RFNAEKKADVRLQIV---ETALLALQGPKAAAALQALVPSKDLSKLPFMHGVDGVTVDGV 220
Query: 508 P-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
C +TR GYTGEDG EIS+P + I E LL++ VKLAGLG RDSL
Sbjct: 221 ANCRVTRCGYTGEDGFEISIPNQHAVQIAEKLLTNPAVKLAGLGPRDSL 269
>gi|145351666|ref|XP_001420189.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580422|gb|ABO98482.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 414
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/234 (47%), Positives = 150/234 (64%), Gaps = 3/234 (1%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYDLH GGK+V FAG+++P+QY SI + H RS+ S+FDVSHML + V GK
Sbjct: 40 KRTPLYDLHARRGGKLVDFAGYALPIQY-EDSIMEATQHCRSEASLFDVSHMLGSSVRGK 98
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LES+ VAD+ L G GTLS+ TNE+GGI DD ++TK + ++V NA + D
Sbjct: 99 DATAFLESLVVADLKGLKDGTGTLSVMTNEKGGIIDDTVITKVNSNDFYVVLNAGCAEKD 158
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ AA + K+ G D+ +F+ +R L+A QGP + ++LQR TD DLS LYF
Sbjct: 159 QAHINAALAKAKAKGMDV--EFVVHSDRSLLAFQGPKTMSVLQRLTDFDLSKLYFGMFTS 216
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C +TR GYTGEDG EISVP + E L S+++V++A LG RDSL
Sbjct: 217 MKINGADCWVTRTGYTGEDGFEISVPNADAMKLAERLESEKEVRMAALGPRDSL 270
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Query: 12 GKRRRETGGFPGASIIQSQIKS--GVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAIT 67
GK RRE F G II+ Q++ + ++R G FT G P R I + + ++G +T
Sbjct: 299 GKARRELCDFTGGEIIKKQLEDPKAIPQRRVGLTFTGKGAPARQHSLILDTDGNQIGEVT 358
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SG SP L+KNIAMGY+ A++K G EL V R KR TKMPFV + YY P +
Sbjct: 359 SGGFSPVLQKNIAMGYVAKAFAKAGTELLVETRGKRTPAVTTKMPFVNTTYYKPAE 414
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 62/97 (63%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTG 518
+ ++F+ +R L+A QGP + ++LQR TD DLS LYF I G C +TR GYTG
Sbjct: 174 MDVEFVVHSDRSLLAFQGPKTMSVLQRLTDFDLSKLYFGMFTSMKINGADCWVTRTGYTG 233
Query: 519 EDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EDG EISVP + E L S+++V++A LG RDSL
Sbjct: 234 EDGFEISVPNADAMKLAERLESEKEVRMAALGPRDSL 270
>gi|330845252|ref|XP_003294508.1| aminomethyltransferase [Dictyostelium purpureum]
gi|325075021|gb|EGC28969.1| aminomethyltransferase [Dictyostelium purpureum]
Length = 404
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/246 (45%), Positives = 147/246 (59%), Gaps = 10/246 (4%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS + ++T L LH GGKMVPF G+ MPVQY A + H+H R + S+FDVSHM Q
Sbjct: 24 SSSTELKKTSLNQLHKELGGKMVPFCGWEMPVQYPA-GVLKEHMHCRKESSLFDVSHMGQ 82
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
GK R ++ ESI VAD+ L G LS+FT E GGI DD ++T DSL++V NA
Sbjct: 83 LRFHGKDRVKFFESIVVADLQSLAAGHSKLSVFTTENGGIIDDTMITNA-GDSLYVVVNA 141
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
D+ + FK G D+ ++ L E+ LIA+QGP + ILQ+ D++++
Sbjct: 142 GCADKDIAHINQQMKLFKEKGNDVSMELL--EDLSLIAIQGPATEVILQKMVKQDITNME 199
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED------VKLAGL 424
FMT R IAGI C +TR GYTGEDG EISVP + + E LLS + +K AGL
Sbjct: 200 FMTQRVMNIAGIDCIVTRCGYTGEDGFEISVPSNKAVQLAEILLSTSNANSEHGIKPAGL 259
Query: 425 GARDSL 430
GARDSL
Sbjct: 260 GARDSL 265
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGCP 71
KRRRE GGFPGAS IQ Q+K GVS+KR G G P R G I + +N+Q +G +TSG
Sbjct: 295 KRRREEGGFPGASKIQQQLKDGVSQKRVGLIVEGSPAREGSLILDPSNNQEIGRVTSGTL 354
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SP ++ I+MGY+ SKVG ++ V VR+K + ++KMPFV ++Y
Sbjct: 355 SPVTRQAISMGYVSTPLSKVGTKVNVSVRNKIIPATISKMPFVPTHY 401
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 8/110 (7%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK G D+ ++ L E+ LIA+QGP + ILQ+ D++++ FMT R IAGI C +
Sbjct: 158 FKEKGNDVSMELL--EDLSLIAIQGPATEVILQKMVKQDITNMEFMTQRVMNIAGIDCIV 215
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDED------VKLAGLGARDSL 555
TR GYTGEDG EISVP + + E LLS + +K AGLGARDSL
Sbjct: 216 TRCGYTGEDGFEISVPSNKAVQLAEILLSTSNANSEHGIKPAGLGARDSL 265
>gi|156354936|ref|XP_001623436.1| predicted protein [Nematostella vectensis]
gi|156210133|gb|EDO31336.1| predicted protein [Nematostella vectensis]
Length = 373
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 155/238 (65%), Gaps = 10/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL +GGKMV F G+SMPVQY + SHLH R ++FDVSHMLQ + GK
Sbjct: 2 KRTPLYDFHLENGGKMVDFCGWSMPVQYQD-GVLQSHLHVRQHAAIFDVSHMLQFKLHGK 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS-RRKV 315
R ++LE + VADV L GTLSLFTN+ GGI+DDLI+ K L+D +++VSNA K+
Sbjct: 61 DRTKFLEDLVVADVQGLQSNTGTLSLFTNDNGGIRDDLIINK-LDDVIYVVSNAGCADKI 119
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
L +DR ++ ++ + E++ L+A+QGP ++ +LQ D DLS L FM
Sbjct: 120 TQHL----KDRLDAVSGNLDVALEILEDKALVALQGPKAAQVLQGGVDGDLSHLTFMHGV 175
Query: 376 PCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 430
++ G+ +TR GYTGEDG E+SV ++ + +L+S + +VKLAGLGARDSL
Sbjct: 176 STSVYGLKDVRVTRCGYTGEDGFELSVDKDRVVDLCRSLMSRQEAEVKLAGLGARDSL 233
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 67/112 (59%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA II QIK R+R G S G P R G ++ + Q VG +TSGCP
Sbjct: 262 GKRRRAEASFPGAKIILQQIKDKPKRRRVGLVSAGPPARAGTKVLDGEGQEVGVVTSGCP 321
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SPS K+NIAM YI SK+G L + V K+V V KMPFV +NY+ K
Sbjct: 322 SPSSKQNIAMAYISTPQSKIGTALQLSVYKKKVPATVAKMPFVPTNYFLGNK 373
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP- 508
DR ++ ++ + E++ L+A+QGP ++ +LQ D DLS L FM ++ G+
Sbjct: 125 DRLDAVSGNLDVALEILEDKALVALQGPKAAQVLQGGVDGDLSHLTFMHGVSTSVYGLKD 184
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 555
+TR GYTGEDG E+SV ++ + +L+S + +VKLAGLGARDSL
Sbjct: 185 VRVTRCGYTGEDGFELSVDKDRVVDLCRSLMSRQEAEVKLAGLGARDSL 233
>gi|168003343|ref|XP_001754372.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694474|gb|EDQ80822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 149/236 (63%), Gaps = 13/236 (5%)
Query: 201 LYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREE 260
LYD H+ +GGKMVPFAG+SMP+QY SI S + RS S+FDVSHM + G +
Sbjct: 2 LYDYHVENGGKMVPFAGWSMPIQY-KDSIMDSTTNCRSNGSLFDVSHMCGLSLKGPDAID 60
Query: 261 WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLM 320
+LE++ VAD+ L PG GTLS+FTNE GG+ DD ++TK +D ++LV NA RK D+ +
Sbjct: 61 FLETLVVADIKGLAPGTGTLSVFTNENGGVIDDTVITKVSDDHIYLVVNAGCRKKDLAHL 120
Query: 321 VAA----QDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
QD KS+G IH +ER L+A+QGPL++ ILQ T DLS +YF +
Sbjct: 121 KKHLKPFQDTGKSVGWHIH------DERSLLALQGPLAADILQTLTKEDLSKMYFSDFKV 174
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 430
I G C LTR GYTGEDG EISVP E + +A++ ++L GLGARDSL
Sbjct: 175 IDINGSECFLTRTGYTGEDGFEISVPDESALDLTKAIMDKGQGKIRLTGLGARDSL 230
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 69/112 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR G F GA I QIK GVS++R GF STG P R EI + +G ITSG
Sbjct: 259 GKRRRAEGNFLGAETILRQIKDGVSKRRVGFISTGAPARAHSEILDLEGNNIGEITSGGF 318
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SP LKKNI+MGYI + K ++ + VR K D VTKMPFV S YY PP+
Sbjct: 319 SPCLKKNISMGYIATGHHKNNTKVKLAVRSKTYDATVTKMPFVPSKYYKPPQ 370
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 504
LK D KS+G IH +ER L+A+QGPL++ ILQ T DLS +YF + I
Sbjct: 124 LKPFQDTGKSVGWHIH------DERSLLALQGPLAADILQTLTKEDLSKMYFSDFKVIDI 177
Query: 505 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 555
G C LTR GYTGEDG EISVP E + +A++ ++L GLGARDSL
Sbjct: 178 NGSECFLTRTGYTGEDGFEISVPDESALDLTKAIMDKGQGKIRLTGLGARDSL 230
>gi|392578950|gb|EIW72077.1| hypothetical protein TREMEDRAFT_70618 [Tremella mesenterica DSM
1558]
Length = 416
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 142/236 (60%), Gaps = 2/236 (0%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPLYD H+SH KMVPFAG+SMP+ YG V A+H H R+ +FDVSHMLQ +G
Sbjct: 41 KHTPLYDFHVSHQAKMVPFAGWSMPLSYGDVGQIAAHNHVRTSAGLFDVSHMLQHRFSGP 100
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ +L S+C + +H L P TLS+F NE GGI DD I+TK DS ++V+NA R D
Sbjct: 101 TSQSFLLSLCPSSLHSLSPFTSTLSVFLNESGGIIDDTIITKHSSDSFYVVTNAGRSTED 160
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
++ A ++ + +++ E GL+A+QGP SS +LQ T+ L + F S
Sbjct: 161 CEMFQTALSKWNAEHPTDVVKWEVLEGWGLLALQGPKSSEVLQSITETSLEGVKFGQSVY 220
Query: 377 CTIA--GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I I C + R GYTGEDG EIS+P E I E + + DV+L GLGARDSL
Sbjct: 221 AEIGKDKIKCHVARGGYTGEDGFEISIPPENTISITEEISNHPDVQLIGLGARDSL 276
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 12 GKRRRETGG--FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAN-DQRVGAITS 68
GK RR + G FPG S I ++ + SR+R GF G P R G ++F+A+ ++ +G ITS
Sbjct: 305 GKDRRTSEGIPFPGKSRILEELSNAPSRRRVGFEVVGAPAREGCKVFDASGEKEIGVITS 364
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G PSP+L NIAMGY+ K G ++ + VR K V MPFV + YY
Sbjct: 365 GIPSPTLGTNIAMGYVINGQHKKGTKVKIEVRKKLRKGIVKSMPFVPTKYY 415
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAG--IPCTLTRAGYTGEDGVEI 524
E GL+A+QGP SS +LQ T+ L + F S I I C + R GYTGEDG EI
Sbjct: 186 EGWGLLALQGPKSSEVLQSITETSLEGVKFGQSVYAEIGKDKIKCHVARGGYTGEDGFEI 245
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S+P E I E + + DV+L GLGARDSL
Sbjct: 246 SIPPENTISITEEISNHPDVQLIGLGARDSL 276
>gi|255554837|ref|XP_002518456.1| aminomethyltransferase, putative [Ricinus communis]
gi|223542301|gb|EEF43843.1| aminomethyltransferase, putative [Ricinus communis]
Length = 407
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 151/242 (62%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEADLKKTVLYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTVNCRQNGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L G GTL++FTNE+GG DD ++TK +D L++V NA
Sbjct: 89 LSLKGKDCVPFLEKLVIADVAGLAHGTGTLTVFTNEKGGAIDDSVITKVKDDLLYIVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKAFKTKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKIY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F I G C LTR GYTGEDG EISV E + +A+L S+ ++L GLGARD
Sbjct: 207 FGEFHMIDINGSHCFLTRTGYTGEDGFEISVASEHAVDLAKAILEKSEGKIRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q+ G +R GFTS+G P R EI N + +G ITSG
Sbjct: 297 GKRRKSEGGFLGAEVILKQLAEGPKIRRVGFTSSGPPPRSHSEIQNDKGENIGEITSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G + + VR K D VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAMGYVKSGLHKAGTNVKILVRGKAYDGVVTKMPFVPTKYYKP 406
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS +YF I G C L
Sbjct: 165 FKTKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKIYFGEFHMIDINGSHCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISV E + +A+L S+ ++L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVASEHAVDLAKAILEKSEGKIRLTGLGARDSL 268
>gi|302851348|ref|XP_002957198.1| hypothetical protein VOLCADRAFT_107582 [Volvox carteri f.
nagariensis]
gi|300257448|gb|EFJ41696.1| hypothetical protein VOLCADRAFT_107582 [Volvox carteri f.
nagariensis]
Length = 420
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 153/249 (61%), Gaps = 5/249 (2%)
Query: 184 TFVFSPGSSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSV 242
+ +F+ G + A ++T LYD H+++GGKMVPFAG+SMP+QY SI S + R S+
Sbjct: 31 SLLFTRGFADDANLKKTVLYDFHVANGGKMVPFAGWSMPIQY-KDSIMESTIFCRKNASL 89
Query: 243 FDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED 302
FDVSHM + GK ++LE + V D+ L G G+LS+FTNEQGGI DD ++TK
Sbjct: 90 FDVSHMCGLTLKGKDAIKFLEGLVVGDIAGLKDGTGSLSVFTNEQGGIIDDTVITKVNGQ 149
Query: 303 SLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT 362
+++V NA R D+ + KS G D+ L ++R L+A+QGP + +L
Sbjct: 150 EIYVVVNAGCRDKDLAHLDKHLQAAKSKGLDVALTV--HDDRSLLALQGPAAKDVLGALA 207
Query: 363 -DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKL 421
+DL+++YF R +AGIPC +TR GYTGEDG EISVP + E L + E V+L
Sbjct: 208 PGVDLAAMYFSDFRTFDVAGIPCWVTRTGYTGEDGFEISVPSTHAVALAEKLTASERVRL 267
Query: 422 AGLGARDSL 430
AGLG RDSL
Sbjct: 268 AGLGPRDSL 276
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 73/115 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRRE F G +I+ Q+ GVS++R GF S+G P R I + Q VG +TSG
Sbjct: 305 GKRRREGFDFLGGDVIKKQLAEGVSKRRVGFVSSGAPARQHSVISTPDGQVVGEVTSGAF 364
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRK 126
SP LKKNIAMGY+E +SK G +L V VR K+ + VTKMPF+ + YY P+ K
Sbjct: 365 SPCLKKNIAMGYVEKDFSKPGTQLKVEVRGKQNEAVVTKMPFLPTPYYKRPEAAK 419
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGIPCTL 511
KS G D+ L ++R L+A+QGP + +L +DL+++YF R +AGIPC +
Sbjct: 175 KSKGLDVALTV--HDDRSLLALQGPAAKDVLGALAPGVDLAAMYFSDFRTFDVAGIPCWV 232
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP + E L + E V+LAGLG RDSL
Sbjct: 233 TRTGYTGEDGFEISVPSTHAVALAEKLTASERVRLAGLGPRDSL 276
>gi|242074370|ref|XP_002447121.1| hypothetical protein SORBIDRAFT_06g029020 [Sorghum bicolor]
gi|241938304|gb|EES11449.1| hypothetical protein SORBIDRAFT_06g029020 [Sorghum bicolor]
Length = 407
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 173/301 (57%), Gaps = 24/301 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R+ +FDV+HM + G+
Sbjct: 36 KKTALYDFHVAHGGKMVPFAGWSMPIQY-RDSIMDSTVNCRANGGLFDVAHMCGLSLRGR 94
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LES+ +ADV L G GTL++FTN++GG DD +VTK + ++LV NA R D
Sbjct: 95 DAIPFLESLVIADVAALRDGTGTLTVFTNDKGGAIDDSVVTKVTDHHIYLVVNAGCRDKD 154
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + F G D+ +ER L+A+QGPL++ LQ T DLS +YF +
Sbjct: 155 LAHIEEHMEAFNKKGGDVKWHI--HDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKL 212
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSLSGDI 434
I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL +
Sbjct: 213 IDINGYSCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSLRLEA 272
Query: 435 TLN----------TPVPHGSLKLSNDRFKS----LGKDIHLQFLS--PEER--GLIAVQG 476
L TPV G R KS LG D+ L+ L P+ R G+I QG
Sbjct: 273 GLCLYGNDMEQHITPVEAGLSWAIGKRRKSEGGFLGADVILKQLQEGPKIRRVGMI-TQG 331
Query: 477 P 477
P
Sbjct: 332 P 332
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q++ G +R G + G P R E+ +++ + +G +TSG
Sbjct: 297 GKRRKSEGGFLGADVILKQLQEGPKIRRVGMITQGPPARSHSELVSSSGESIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G E V VR K D VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAMGYVKSGMHKAGTEFKVVVRGKSYDAVVTKMPFVPTKYYRP 406
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ F G D+ +ER L+A+QGPL++ LQ T DLS +YF + I G C
Sbjct: 163 EAFNKKGGDVKWHI--HDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKLIDINGYSC 220
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 221 FLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 268
>gi|321254109|ref|XP_003192968.1| aminomethyltransferase, mitochondrial precursor [Cryptococcus
gattii WM276]
gi|317459437|gb|ADV21181.1| aminomethyltransferase, mitochondrial precursor, putative
[Cryptococcus gattii WM276]
Length = 410
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 5/239 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H+ H KMVPFAG+SMP+ YG T +H H RS +FDVSHMLQ TG
Sbjct: 31 KKTPLYDFHVQHKAKMVPFAGYSMPLSYGETGQTTAHKHVRSDAGLFDVSHMLQHNFTGP 90
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+E+L ++C + + L P TLS+ NEQGGI DD I+TK + S ++V+NA R D
Sbjct: 91 TAQEFLLTLCPSSLDSLTPFTSTLSVLLNEQGGIIDDTIITKHSDTSFYVVTNAGRADED 150
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ D + + K +++ + + GL+A+QGP + +LQR TD DL+ + F +S
Sbjct: 151 KAHITQKLDAWNAAHKGQEVKWETLDGWGLLALQGPKAKDVLQRMTDQDLNQVKFGSSVF 210
Query: 377 CTIAG-----IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I + C + R GYTGEDG E+SVP +Q + + ++ DV L GLGARDSL
Sbjct: 211 ADIKTTDGQVVKCHIARGGYTGEDGFEVSVPPQQTVAVSNTMTANPDVMLIGLGARDSL 269
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
Query: 12 GKRRRETGG---FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNA-NDQRVGAIT 67
GK RR FPG S I ++ +G SR+R GF G P R G ++F+A ++++G IT
Sbjct: 298 GKNRRAPDAQPAFPGKSRILEELANGPSRRRVGFEVVGSPAREGCKVFDALGEKQIGVIT 357
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SG PSP+L KNIAMGYI K G E+ + +R+K D V MPFV + Y+
Sbjct: 358 SGIPSPTLGKNIAMGYIASGSHKKGTEVKIEIRNKLRDAVVKPMPFVPAKYF 409
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAG--- 506
D + + K +++ + + GL+A+QGP + +LQR TD DL+ + F +S I
Sbjct: 159 DAWNAAHKGQEVKWETLDGWGLLALQGPKAKDVLQRMTDQDLNQVKFGSSVFADIKTTDG 218
Query: 507 --IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ C + R GYTGEDG E+SVP +Q + + ++ DV L GLGARDSL
Sbjct: 219 QVVKCHIARGGYTGEDGFEVSVPPQQTVAVSNTMTANPDVMLIGLGARDSL 269
>gi|449671880|ref|XP_002161350.2| PREDICTED: aminomethyltransferase, mitochondrial-like [Hydra
magnipapillata]
Length = 375
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 146/236 (61%), Gaps = 8/236 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LYD H+ +GGKMVPFAG+ MPVQY I SHLHTR K S+FDVSHMLQ + G+
Sbjct: 8 QTKLYDFHIKNGGKMVPFAGWLMPVQYSDQGIIQSHLHTRKKASLFDVSHMLQFNIHGRD 67
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
R ++LE + VAD+ + G LSLF N +GGI DD I+ D +++VSNA +
Sbjct: 68 RVKFLEELVVADIKNMSENAGGLSLFMNAKGGIIDDCIINNA-GDHIYVVSNAG-CAYKI 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
++ Q + DI ++FL+ + L+A+QGP + LQ DLS L FM +
Sbjct: 126 KPLIEMQFLHRKTELDIDIEFLN---KSLLAIQGPTAKLALQEGVSKDLSRLKFMHGQTM 182
Query: 378 TIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDG E+S+P E+ +I + LL DVKLAGLGARD+L
Sbjct: 183 NVFGVEGCRVTRCGYTGEDGFEVSIPSEKVENIADNLLGIKTADVKLAGLGARDTL 238
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I + L+ GK+R E FPGA I+ +QIK+ KR G + G P R + + + +
Sbjct: 258 IEAGLMWTIGKQRMEARDFPGADIVLNQIKNKPEIKRVGLIAHGPPARGHTPVMDLHGNK 317
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
+G +TSGCPSPSL++NIAM Y+ A SK+ +L ++ K +V K+PFV + Y+
Sbjct: 318 IGEVTSGCPSPSLQQNIAMAYVPTALSKISTKLQLQRGSKYFQCEVVKLPFVPTKYFV 375
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 6/101 (5%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGY 516
DI ++FL+ + L+A+QGP + LQ DLS L FM + + G+ C +TR GY
Sbjct: 141 DIDIEFLN---KSLLAIQGPTAKLALQEGVSKDLSRLKFMHGQTMNVFGVEGCRVTRCGY 197
Query: 517 TGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TGEDG E+S+P E+ +I + LL DVKLAGLGARD+L
Sbjct: 198 TGEDGFEVSIPSEKVENIADNLLGIKTADVKLAGLGARDTL 238
>gi|452819586|gb|EME26642.1| aminomethyltransferase [Galdieria sulphuraria]
Length = 407
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 142/234 (60%), Gaps = 4/234 (1%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD HL +G KM F G+ MP+QY I +HL R +FDVSHM Q + G+
Sbjct: 40 KRTALYDSHLKYGAKMTEFCGYEMPLQYND-GIRDNHLFVRKSAGLFDVSHMGQVRIYGR 98
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
HR +LE + V D+ L P LSL TNEQGGI DD IVT + D + +V NA R D
Sbjct: 99 HRVSFLERLVVGDIAALPPYHAVLSLLTNEQGGIIDDTIVT-NMGDHINMVINACCRDKD 157
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M + ++ +S G+++ ++ E+RGL+A+QGP + +L +H DLS LYFM +R
Sbjct: 158 MSHLQHYAEQARSKGEEVIVEL--QEQRGLVALQGPNAMKVLSKHVTEDLSMLYFMNARM 215
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R GYTGEDG EISVP + I + L V+ +GLGARDSL
Sbjct: 216 MWVDGVECLVSRCGYTGEDGFEISVPNDSIQRIFDGLCDSSMVRPSGLGARDSL 269
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
K RRE+GGF G +I Q+K GV R+R GF G P R G+E ++Q +G +TSG S
Sbjct: 299 KSRRESGGFLGDKVILKQLKEGVERRRVGFLLQGAPAR-GHESILVDNQVIGQVTSGVFS 357
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P L K I MGY+E ++K G + + +R K+V ++ KMPFV ++YY
Sbjct: 358 PCLGKPIGMGYVEKKWAKSGTCIQIEIRQKQVSGELVKMPFVPNHYY 404
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
++ +S G+++ ++ E+RGL+A+QGP + +L +H DLS LYFM +R + G+ C
Sbjct: 166 EQARSKGEEVIVEL--QEQRGLVALQGPNAMKVLSKHVTEDLSMLYFMNARMMWVDGVEC 223
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
++R GYTGEDG EISVP + I + L V+ +GLGARDSL
Sbjct: 224 LVSRCGYTGEDGFEISVPNDSIQRIFDGLCDSSMVRPSGLGARDSL 269
>gi|430811494|emb|CCJ31028.1| unnamed protein product [Pneumocystis jirovecii]
Length = 395
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 156/258 (60%), Gaps = 16/258 (6%)
Query: 174 LKFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASH 233
L+FL F + VFSP +TPLYDLH+ +G KM FAGF MP+ Y SI SH
Sbjct: 11 LRFLRF----SCVFSP------HHKTPLYDLHIEYGAKMTEFAGFWMPLFYADQSILESH 60
Query: 234 LHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDD 293
LH RSK +VFDVSHM+ V+G +LES+ +D+ +L G LS+ N GGI+DD
Sbjct: 61 LHVRSKAAVFDVSHMIFR-VSGSQAAPFLESLTPSDIQQLPLGTSVLSVLLNTDGGIEDD 119
Query: 294 LIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPL 353
L+V + ++ +LV+NA+ R ++ D ++ + H++ E L+A+QGPL
Sbjct: 120 LMVYRHEDNVFYLVTNAATRSKNIKYFA---DHLRAW-DNTHVKVEERTEAALLALQGPL 175
Query: 354 SSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEAL 413
S++ILQ HT DLS++ F +AG+ ++R GYTGEDG EIS+P + ++ A
Sbjct: 176 SASILQTHTHYDLSTVKFGGFVSAKVAGVDTYVSRTGYTGEDGFEISIPSKHAVSVLRAF 235
Query: 414 LSDED-VKLAGLGARDSL 430
L D ++LAGLGARDSL
Sbjct: 236 LRTSDALRLAGLGARDSL 253
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIR----PGYEIFNAN-DQRVGAI 66
GKRRRE GGFPG I Q++ GV KR G G P R G I +A+ +++G +
Sbjct: 282 GKRRREEGGFPGDLRILKQLREGVQHKRVGLVVKGAPARRRASHGASILSADGSEKIGHV 341
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
TSGCPSPSL KNIAMGYI+ Y K ++ V VR K + V+K+P++ + YY
Sbjct: 342 TSGCPSPSLGKNIAMGYIKTGYHKKDTQVTVDVRGKPRNALVSKIPWITTKYY 394
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 434 ITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSS 493
+ N ++K D ++ + H++ E L+A+QGPLS++ILQ HT DLS+
Sbjct: 132 LVTNAATRSKNIKYFADHLRAW-DNTHVKVEERTEAALLALQGPLSASILQTHTHYDLST 190
Query: 494 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED-VKLAGLGAR 552
+ F +AG+ ++R GYTGEDG EIS+P + ++ A L D ++LAGLGAR
Sbjct: 191 VKFGGFVSAKVAGVDTYVSRTGYTGEDGFEISIPSKHAVSVLRAFLRTSDALRLAGLGAR 250
Query: 553 DSL 555
DSL
Sbjct: 251 DSL 253
>gi|168029405|ref|XP_001767216.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681471|gb|EDQ67897.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 412
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 150/240 (62%), Gaps = 13/240 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+ +GGKMVPFAG++MP+QY SI S ++ R+ S+FDVSHM + G
Sbjct: 40 KKTMLYDYHVENGGKMVPFAGWAMPIQY-KDSIMDSTINCRTNGSLFDVSHMCGLSLKGP 98
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++LE++ VAD+ L G GTLS+FTNE GG+ DD ++TK +D ++LV NA R D
Sbjct: 99 DAIDFLETLVVADIKGLANGTGTLSVFTNENGGVIDDTVITKVTDDHIYLVVNAGCRDKD 158
Query: 317 MDLMVAAQDRF----KSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ + F KS+G IH +ER L+A+QGPL+ +LQ+ T DLS +YF
Sbjct: 159 LAHLEKYLKPFLASGKSVGWHIH------DERSLLALQGPLAGEVLQKLTKEDLSKMYFS 212
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 430
+ I G C LTR GYTGEDG EISVP E + +A++ ++L GLGARDSL
Sbjct: 213 DFKIIDINGSECFLTRTGYTGEDGFEISVPDESALDLTKAIMDKAPGKLRLTGLGARDSL 272
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 70/112 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR G F GA I QIK GVSR+R GF STG P R EI + + +G ITSG
Sbjct: 301 GKRRRAEGNFLGAEPILRQIKDGVSRRRVGFISTGAPARAHSEILDLEGKNIGEITSGGF 360
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SP LKKNI+MGYI + K ++ V VR K D VTKMPFV S YY PP+
Sbjct: 361 SPCLKKNISMGYIATGHHKNNTQVKVTVRSKSYDAVVTKMPFVPSKYYKPPQ 412
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 8/105 (7%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
KS+G IH +ER L+A+QGPL+ +LQ+ T DLS +YF + I G C LT
Sbjct: 174 KSVGWHIH------DERSLLALQGPLAGEVLQKLTKEDLSKMYFSDFKIIDINGSECFLT 227
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
R GYTGEDG EISVP E + +A++ ++L GLGARDSL
Sbjct: 228 RTGYTGEDGFEISVPDESALDLTKAIMDKAPGKLRLTGLGARDSL 272
>gi|71278482|ref|YP_270503.1| glycine cleavage system T protein [Colwellia psychrerythraea 34H]
gi|71144222|gb|AAZ24695.1| glycine cleavage system T protein [Colwellia psychrerythraea 34H]
Length = 375
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 147/233 (63%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP YDLH+ GGKMVPFAG+ MPVQY + + HLHTR++ +FDVSHM Q + GK+
Sbjct: 10 KTPCYDLHIEAGGKMVPFAGYDMPVQY-EMGVKKEHLHTRAQAGLFDVSHMGQLKLVGKN 68
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ +L GK +LFTN+QGG+ DDL+V+ D LF+V NA+ + D+
Sbjct: 69 AAAALETLVPVDIIDLPQGKQRYALFTNDQGGLLDDLMVS-NFGDHLFVVVNAACKAQDI 127
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
M K L D+ ++ L E R L+A+QGP + +L+R + + + FM SR
Sbjct: 128 AHMQ------KHLPADVEIEIL--EGRALLALQGPKAGEVLKRLLP-ESADMVFMDSRVV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
AG C + RAGYTGEDG EIS+PGE I +L++E+++ GLGARDSL
Sbjct: 179 DFAGAQCIIGRAGYTGEDGFEISIPGEHAERITRLMLAEEEIEWIGLGARDSL 231
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI + V+RKR G G P+R G ++FNA +G +TSG P+
Sbjct: 270 AGGFPGADIILDQIATKDVARKRIGMVGLGKAPVREGIKLFNAQGDEIGVVTSGTAGPTK 329
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
IAMGY++ Y+ + E++ VR K++ + + KMPFV+ Y+
Sbjct: 330 GSPIAMGYVQTQYAVLDTEIFAEVRGKKLPMLIQKMPFVEQRYF 373
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K L D+ ++ L E R L+A+QGP + +L+R + + + FM SR AG C +
Sbjct: 132 KHLPADVEIEIL--EGRALLALQGPKAGEVLKRLLP-ESADMVFMDSRVVDFAGAQCIIG 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
RAGYTGEDG EIS+PGE I +L++E+++ GLGARDSL
Sbjct: 189 RAGYTGEDGFEISIPGEHAERITRLMLAEEEIEWIGLGARDSL 231
>gi|427426929|ref|ZP_18916974.1| Aminomethyltransferase (glycine cleavage system T protein)
[Caenispirillum salinarum AK4]
gi|425883630|gb|EKV32305.1| Aminomethyltransferase (glycine cleavage system T protein)
[Caenispirillum salinarum AK4]
Length = 372
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 148/242 (61%), Gaps = 12/242 (4%)
Query: 191 SSPSAE--QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHM 248
S P+AE + TPL LH G KMVPFAG++MPVQY + + HLHTR +FDVSHM
Sbjct: 2 SEPNAESLKSTPLDALHRELGAKMVPFAGYAMPVQY-PMGVLKEHLHTRQAAGLFDVSHM 60
Query: 249 LQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
Q + G++R E LE + D+ L G+ +LFT+E GGI DDL+V+ D L+LV
Sbjct: 61 GQCRIHGENRAEALEGLVTGDIQGLKTGRQRYTLFTDENGGILDDLMVSNA-GDHLYLVV 119
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D M A + + L+ L E+R LIA+QGP ++ +++ H ++
Sbjct: 120 NAAVKDADFARMKAHLEP-----RGCQLEIL--EDRALIALQGPAAAKVME-HLAPSSTA 171
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FMT+ P + G+PC +TR+GYTGEDG EISVP +Q H+ LL DV GLGARD
Sbjct: 172 MTFMTAGPLEVNGVPCFVTRSGYTGEDGFEISVPADQAEHLARHLLEQADVAPIGLGARD 231
Query: 429 SL 430
SL
Sbjct: 232 SL 233
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPGA I Q + G +RKR G G P R EI + + VG ITSG
Sbjct: 263 KRRREEGGFPGADFILKQREEGPARKRVGIKPAGRAPARAHTEIQDETGRTVGEITSGGF 322
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PS+ +AMGY+E A ++ G L + VR K + +V +PFVK NYY
Sbjct: 323 GPSVNGPVAMGYVEAALAEPGTPLQLIVRGKAMPAEVAALPFVKQNYY 370
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R LIA+QGP ++ +++ H +++ FMT+ P + G+PC +TR+GYTGEDG EISV
Sbjct: 146 EDRALIALQGPAAAKVME-HLAPSSTAMTFMTAGPLEVNGVPCFVTRSGYTGEDGFEISV 204
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P +Q H+ LL DV GLGARDSL
Sbjct: 205 PADQAEHLARHLLEQADVAPIGLGARDSL 233
>gi|170101120|ref|XP_001881777.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643132|gb|EDR07385.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 371
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 142/234 (60%), Gaps = 4/234 (1%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+ +G KMVPFAG+SMP+ YG V ASH H RS +FDV HM+Q+ G+
Sbjct: 4 RKTGLYDFHIENGAKMVPFAGYSMPLAYGNVGQVASHNHVRSSAGLFDVGHMVQSNFRGQ 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+LE + + + L P TLS+ NE GGI DD I+TK D+ ++V+NA RR VD
Sbjct: 64 TATEFLEWLTPSSLTALSPYTSTLSVLLNENGGIIDDTIITKHAPDAFYVVTNAGRRDVD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + + GK + ++ L E+ GL+A+QGP ++T LQ T DL L F S
Sbjct: 124 LPWFTKKLEEWNAKGK-VEMEVL--EDWGLLALQGPAAATYLQALTSFDLRLLTFGKSAF 180
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G + R GYTGEDG EIS+P Q + + LLS V+L GLGARDSL
Sbjct: 181 VPIEGFNLHVARGGYTGEDGFEISIPPSQTVEVAK-LLSKTPVQLTGLGARDSL 233
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 68/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GK R+E G F GA ++ +K G R+R G G P R G +IF + + +G +TSG P
Sbjct: 262 GKDRKEAGDFIGAEGVRQHLKDGPPRRRVGLVVEGAPAREGAKIFTPSGEELGIVTSGIP 321
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSL+KNIAMGY++ K G E+ V VR+KR VT MPF+K NY+
Sbjct: 322 SPSLQKNIAMGYVKSGSHKKGTEVEVEVRNKRRKAVVTPMPFIKPNYW 369
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+ GL+A+QGP ++T LQ T DL L F S I G + R GYTGEDG EIS+
Sbjct: 146 EDWGLLALQGPAAATYLQALTSFDLRLLTFGKSAFVPIEGFNLHVARGGYTGEDGFEISI 205
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P Q + + LLS V+L GLGARDSL
Sbjct: 206 PPSQTVEVAK-LLSKTPVQLTGLGARDSL 233
>gi|336368627|gb|EGN96970.1| hypothetical protein SERLA73DRAFT_185236 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381412|gb|EGO22564.1| hypothetical protein SERLADRAFT_473565 [Serpula lacrymans var.
lacrymans S7.9]
Length = 412
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 149/253 (58%), Gaps = 5/253 (1%)
Query: 182 GLTFVFSPGSSPSAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSK 239
G++ V+ G + S + RT LYD H+ +G KMVPFAG+SMP+ YG+V ASH + RS
Sbjct: 22 GVSRVYCRGLATSVGELKRTGLYDFHVENGAKMVPFAGYSMPLAYGSVGQVASHSYVRSS 81
Query: 240 VSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKT 299
V +FDV HM+Q+ G +LE + + + L P TLS+ NE+GGI DD ++TK
Sbjct: 82 VGLFDVGHMVQSNFRGPTATAFLEWLTPSSLSSLTPYSSTLSVILNEKGGIIDDTVITKH 141
Query: 300 LEDSLFLVSNASRRKVDMDLMVAAQDRFK--SLGKDIHLQFLSAEERGLIAVQGPLSSTI 357
+D+ ++V+NA RR D+ D + G+D ++ + GLIA+QGP ++
Sbjct: 142 SDDAYYVVTNAGRRDRDLPWFREKLDEWNHGEKGRDGKVEIEVLDNWGLIALQGPEAAAY 201
Query: 358 LQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE 417
LQR T DL L F TS I G + R GYTGEDG EIS+P Q + E LLS
Sbjct: 202 LQRFTSFDLKDLIFGTSAFVPIEGFNLHVARGGYTGEDGFEISIPPSQTLDVAE-LLSKH 260
Query: 418 DVKLAGLGARDSL 430
VKL GLGARDSL
Sbjct: 261 PVKLTGLGARDSL 273
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
GK RRE+G F GA ++ +K G R+R G G P R G +IF + +G +TSG
Sbjct: 302 GKERRESGEFIGAEGVRRHLKDGPPRRRVGLVVEGAPARQGAQIFAPSGTDLIGNVTSGI 361
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGY++ + K G E+ V VR+K +T MPFVK Y+
Sbjct: 362 PSPTLGKNIAMGYVQSGWHKKGTEVEVEVRNKLRKGVLTPMPFVKPKYW 410
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA 505
KL G+D ++ + GLIA+QGP ++ LQR T DL L F TS I
Sbjct: 165 KLDEWNHGEKGRDGKVEIEVLDNWGLIALQGPEAAAYLQRFTSFDLKDLIFGTSAFVPIE 224
Query: 506 GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G + R GYTGEDG EIS+P Q + E LLS VKL GLGARDSL
Sbjct: 225 GFNLHVARGGYTGEDGFEISIPPSQTLDVAE-LLSKHPVKLTGLGARDSL 273
>gi|392566790|gb|EIW59966.1| glycine cleavage system T protein [Trametes versicolor FP-101664
SS1]
Length = 405
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 144/240 (60%), Gaps = 3/240 (1%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+PS +RT LYD H+ +G KMVPFA ++MP+QYG V ASH H R V +FDVSHM+Q
Sbjct: 30 SAPSDLRRTALYDFHVKNGAKMVPFASYAMPLQYGDVGAVASHKHVRESVGLFDVSHMVQ 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+V+ G E+LE I +D+ L TLS+ NE GGI DDL++TK D+ ++V+NA
Sbjct: 90 SVIRGPTATEFLEWITPSDLQSLPAYSSTLSVLLNENGGIIDDLMITKHAPDAFYVVTNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
RR+ D+ A + + + L+ L+ + GL+A+QGP ++ LQ T DL L
Sbjct: 150 GRRERDIAWFQTAIKEWNAKHDPVELEILA--DWGLLALQGPEAANYLQGLTSFDLRELT 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
F I G + R GYTGEDG EIS+ + + + LLS V+L GLGARDSL
Sbjct: 208 FGKCAWIPIEGFNLHVARGGYTGEDGFEISISPSETVEVAQ-LLSKSPVQLTGLGARDSL 266
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
GKRRRE F G + Q+K G R+R G G P R G +I + + +++G +TSG
Sbjct: 295 GKRRRENPTFHGHENVMKQLKEGPPRRRVGMIVEGPPAREGAKILDPESKEQIGVVTSGI 354
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGY++ + K G EL V VR K+ +T MPFV S+YY
Sbjct: 355 PSPTLGKNIAMGYVKNGFHKKGTELAVDVRGKQRKAVLTPMPFVPSHYY 403
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTG 518
+ L+ L+ + GL+A+QGP ++ LQ T DL L F I G + R GYTG
Sbjct: 173 VELEILA--DWGLLALQGPEAANYLQGLTSFDLRELTFGKCAWIPIEGFNLHVARGGYTG 230
Query: 519 EDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EDG EIS+ + + + LLS V+L GLGARDSL
Sbjct: 231 EDGFEISISPSETVEVAQ-LLSKSPVQLTGLGARDSL 266
>gi|19114927|ref|NP_594015.1| glycine decarboxylase T subunit (predicted) [Schizosaccharomyces
pombe 972h-]
gi|12643537|sp|O14110.1|GCST_SCHPO RecName: Full=Probable aminomethyltransferase, mitochondrial;
AltName: Full=Glycine cleavage system T protein;
Short=GCVT; Flags: Precursor
gi|2388965|emb|CAB11698.1| glycine decarboxylase T subunit (predicted) [Schizosaccharomyces
pombe]
Length = 387
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 150/244 (61%), Gaps = 7/244 (2%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S ++ S+ +RTPLYDLHL G +VPFAGFSMPVQY +I+ASH TR +FDVSH
Sbjct: 14 SSTAASSSLKRTPLYDLHLKEGATIVPFAGFSMPVQYKGQTISASHKWTREHSGLFDVSH 73
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
M+Q V G++ +LESI + + EL P TLS FTNE GGI DD I++K E++ ++V
Sbjct: 74 MVQWFVRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDENTYYIV 133
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDL 366
+NA+ + D + + +K ++ + R LIA+QGP +++++Q+ ++D
Sbjct: 134 TNAACSEKDEANLKKHIENWKG------VELERVQGRALIAIQGPETASVVQKLIPNVDF 187
Query: 367 SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
S L F S G+ C +R+GYTGEDG E+S+P E LL+D V+ GLGA
Sbjct: 188 SVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIPEEVSVDFASTLLADTRVRPIGLGA 247
Query: 427 RDSL 430
RD+L
Sbjct: 248 RDTL 251
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR+ GGF G+S I ++K G SR+R GF VP R G + + VG +TSGCP
Sbjct: 280 GKRRRKEGGFVGSSRILKELKDGPSRRRVGFIVEKVPARHGSAV-EVDGVEVGQVTSGCP 338
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L KNIAMGYI +VG ++VR+K +V +MPFV+++YY
Sbjct: 339 SPTLGKNIAMGYISTGLHQVGTPAHIKVRNKLHPAQVVRMPFVETHYY 386
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 469 RGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP +++++Q+ ++D S L F S G+ C +R+GYTGEDG E+S+P
Sbjct: 164 RALIAIQGPETASVVQKLIPNVDFSVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIP 223
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E LL+D V+ GLGARD+L
Sbjct: 224 EEVSVDFASTLLADTRVRPIGLGARDTL 251
>gi|407771891|ref|ZP_11119237.1| glycine cleavage system aminomethyltransferase T [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407285124|gb|EKF10634.1| glycine cleavage system aminomethyltransferase T [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 370
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 146/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LYDLH+ G KMVPFAG+ MPVQY + + HLHTR+K +FDVSHM Q +TG+H
Sbjct: 10 KTALYDLHVELGAKMVPFAGYDMPVQY-PLGVKGEHLHTRAKAGLFDVSHMGQVRLTGEH 68
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
R LE + D+ L PG+ S FTN+ G I DDL++T DSLFLV NA+ + D+
Sbjct: 69 RVAELEKLVPGDIAILKPGRTRYSAFTNDDGTILDDLMITNA-GDSLFLVINAACKDDDI 127
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
M A D ++ + ++R L+A+QGP ++ +L R ++ + FM+
Sbjct: 128 VHMRANLDN--------GVELIEIDDRALMALQGPDAAKVLARFAP-SVADMKFMSFAEI 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
IAGI C +TR+GYTGEDG EISVP ++ + LL++E+V+ GLGARDSL
Sbjct: 179 DIAGIACFVTRSGYTGEDGYEISVPNDRADELARKLLAEEEVEAIGLGARDSL 231
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
D ++ + ++R L+A+QGP ++ +L R ++ + FM+ IAGI C +TR+GYT
Sbjct: 135 DNGVELIEIDDRALMALQGPDAAKVLARFAP-SVADMKFMSFAEIDIAGIACFVTRSGYT 193
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISVP ++ + LL++E+V+ GLGARDSL
Sbjct: 194 GEDGYEISVPNDRADELARKLLAEEEVEAIGLGARDSL 231
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGF GA II Q+ +G RKR G G P R I N++ + +G ITSG
Sbjct: 261 KRRREEGGFKGADIILDQLANGADRKRVGIKPEGKAPAREHTAILNSDGEEIGEITSGGF 320
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P++ IAMGY+ ++ G ++ + VR K ++ ++PFV YY
Sbjct: 321 GPTVDGPIAMGYVAIEFAAPGTKVDLMVRGKARPAEIVELPFVAHRYY 368
>gi|405119102|gb|AFR93875.1| aminomethyltransferase [Cryptococcus neoformans var. grubii H99]
Length = 410
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 149/258 (57%), Gaps = 7/258 (2%)
Query: 180 FSGLTFVFSPGSSPSAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTR 237
F+ LT S+ A+Q +TPLYD H+ H KMVPFAG+SMP+ YG +H H R
Sbjct: 12 FAALTKRALATSAVLAQQLKKTPLYDFHVQHKAKMVPFAGYSMPLSYGETGQITAHKHVR 71
Query: 238 SKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVT 297
S +FDVSHMLQ TG +E+L ++C + + L P TLS+ NEQGGI DD I+T
Sbjct: 72 SDAGLFDVSHMLQHNFTGPTAQEFLLTLCPSSLDSLKPFTSTLSVLLNEQGGIIDDTIIT 131
Query: 298 KTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTI 357
K + + ++V+NA R D + + + + K +++ + E GL+A+QGP + +
Sbjct: 132 KHTDSAFYVVTNAGRSAEDKAHISQKLEEWNAAHKGQEVKWETLEGWGLLALQGPKAKDV 191
Query: 358 LQRHTDLDLSSLYFMTSRPCTI-----AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEA 412
LQR TD DL+ + F +S I + C + R GYTGEDG E+S+P E +
Sbjct: 192 LQRITDQDLNQVKFGSSVFADIKTMDGQTVKCHVARGGYTGEDGFEVSIPPEHTLALSNT 251
Query: 413 LLSDEDVKLAGLGARDSL 430
+ S DV L GLGARDSL
Sbjct: 252 IASHPDVMLIGLGARDSL 269
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 12 GKRRRETGG---FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNA-NDQRVGAIT 67
GK RR FPG S I ++ +G SR+R GF G P R G ++ +A + +G IT
Sbjct: 298 GKDRRAPDAQPSFPGKSRILEELANGPSRRRVGFEIIGAPAREGCKVLDALGGKEIGVIT 357
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SG PSP+L KNIAMGYI K G E+ V VR K D V MPFV + Y+
Sbjct: 358 SGIPSPTLGKNIAMGYIANGSHKKGTEVKVEVRKKLRDAIVKPMPFVPTKYF 409
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 442 HGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
H S KL G+++ + L E GL+A+QGP + +LQR TD DL+ + F +S
Sbjct: 153 HISQKLEEWNAAHKGQEVKWETL--EGWGLLALQGPKAKDVLQRITDQDLNQVKFGSSVF 210
Query: 502 CTI-----AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
I + C + R GYTGEDG E+S+P E + + S DV L GLGARDSL
Sbjct: 211 ADIKTMDGQTVKCHVARGGYTGEDGFEVSIPPEHTLALSNTIASHPDVMLIGLGARDSL 269
>gi|1507668|dbj|BAA12709.1| ORF N313 [Schizosaccharomyces pombe]
Length = 313
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 153/253 (60%), Gaps = 10/253 (3%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S ++ S+ +RTPLYDLHL G +VPFAGFSMPVQY +I+ASH TR +FDVSH
Sbjct: 14 SSTAASSSLKRTPLYDLHLKEGATIVPFAGFSMPVQYKGQTISASHKWTREHSGLFDVSH 73
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
M+Q V G++ +LESI + + EL P TLS FTNE GGI DD I++K ++ ++V
Sbjct: 74 MVQWFVRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDGNTYYIV 133
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDL 366
+NA+ + D + + +K ++ + R LIA+QGP +++++Q+ ++D
Sbjct: 134 TNAACSEKDEANLKKHIENWKG------VELERVQGRALIAIQGPETASVVQKLIPNVDF 187
Query: 367 SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
S L F S G+ C +R+GYTGEDG E+S+P E LL+D V+ GLGA
Sbjct: 188 SVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIPEEVSVDFASTLLADTRVRPIGLGA 247
Query: 427 RDSL---SGDITL 436
RD+L SG++
Sbjct: 248 RDTLRLESGNVAF 260
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 469 RGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP +++++Q+ ++D S L F S G+ C +R+GYTGEDG E+S+P
Sbjct: 164 RALIAIQGPETASVVQKLIPNVDFSVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIP 223
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E LL+D V+ GLGARD+L
Sbjct: 224 EEVSVDFASTLLADTRVRPIGLGARDTL 251
>gi|378726537|gb|EHY52996.1| aminomethyltransferase [Exophiala dermatitidis NIH/UT8656]
Length = 509
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 159/269 (59%), Gaps = 29/269 (10%)
Query: 191 SSPSAEQ---RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
SS S EQ RTPLY+LH S G KMVPFA F+MP++Y S SHL TRS S+FDVSH
Sbjct: 92 SSESGEQELKRTPLYELHTSLGAKMVPFAEFAMPLEYPDQSHRESHLWTRSNASLFDVSH 151
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
M+Q ++G+ EE+L +I + ++E++ TLS N+QGGI DD ++T+ +DS + V
Sbjct: 152 MVQHKMSGELAEEFLMTITPSAINEIEKHHSTLSCLLNKQGGIVDDTVITRIGKDSFYFV 211
Query: 308 SNASRRKVDMDLMVAAQDRF-KSLG--KDIHLQFLSAEERGLIAVQGPLSSTILQ----- 359
+NA RK D+ + A D F KS G KD + + + LIA+QGP ++++LQ
Sbjct: 212 TNAGCRKGDLAFIEAEMDEFLKSKGNPKDKAINWHVLDHHALIALQGPAAASVLQSLVYN 271
Query: 360 ----RHTDLDLSSLYFMTSR------PCTIAGIPCTL-TRAGYTGEDGVEISVPGEQ--- 405
D L SLYF TSR P T P L TR GYTGEDG EIS+P E
Sbjct: 272 DTEDESYDTKLDSLYFGTSRWLQLTLPETGMNTPSLLITRTGYTGEDGFEISIPPENGDA 331
Query: 406 ---CTHIVEALLSDED-VKLAGLGARDSL 430
T I +AL +D V+ AGLGARDSL
Sbjct: 332 TELATSIAKALTADSSKVRWAGLGARDSL 360
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 12 GKRRRETGG---FPGASIIQSQIKS--GVSRKRTGF-TSTGVPIRPGYEIFN--ANDQRV 63
GK RR F G II Q+ S + ++R GF G R G EI + +++Q +
Sbjct: 389 GKSRRGENPQPPFNGHEIINKQLASPKTMPQRRVGFLVEKGPAAREGAEIVDPGSDNQVI 448
Query: 64 GAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
G +TSGCPSPSL +NIAMGY++ + K G ++ ++VR +V KMPFV+S +Y P
Sbjct: 449 GHVTSGCPSPSLGGQNIAMGYVKNGFHKKGTKVGIKVRKNVRQAEVAKMPFVESKFYRP 507
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 64/122 (52%), Gaps = 23/122 (18%)
Query: 457 KDIHLQFLSPEERGLIAVQGPLSSTILQ---------RHTDLDLSSLYFMTSR------P 501
KD + + + LIA+QGP ++++LQ D L SLYF TSR P
Sbjct: 239 KDKAINWHVLDHHALIALQGPAAASVLQSLVYNDTEDESYDTKLDSLYFGTSRWLQLTLP 298
Query: 502 CTIAGIPCTL-TRAGYTGEDGVEISVPGEQ------CTHIVEALLSDED-VKLAGLGARD 553
T P L TR GYTGEDG EIS+P E T I +AL +D V+ AGLGARD
Sbjct: 299 ETGMNTPSLLITRTGYTGEDGFEISIPPENGDATELATSIAKALTADSSKVRWAGLGARD 358
Query: 554 SL 555
SL
Sbjct: 359 SL 360
>gi|281210648|gb|EFA84814.1| aminomethyltransferase [Polysphondylium pallidum PN500]
Length = 407
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/242 (43%), Positives = 144/242 (59%), Gaps = 6/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ + ++T L+DLH G KMVPF G+ MP+ Y + H R+ ++FDVSHM Q
Sbjct: 28 ATQTNNKKTALFDLHKDLGAKMVPFCGWDMPLMY-PTGVLKEHFQCRNNSALFDVSHMGQ 86
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK R E+ ESI VAD+ L G LS+FT EQGGI DD ++T E+ L++V NA
Sbjct: 87 LRIHGKDRVEFFESIVVADIQALPVGHSKLSVFTTEQGGIIDDTMITNAGEN-LYVVVNA 145
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
D+ + FK+ GKD+ L+ + E++ LIAVQGP + +I+ + LDLS++
Sbjct: 146 GCADKDIAHIKQKMAEFKATGKDVSLELM--EDQALIAVQGPSTESIVSKLAKLDLSNME 203
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD--EDVKLAGLGARD 428
FMT R I I +TR GYTGEDG EISV + + LL E VK AGLGARD
Sbjct: 204 FMTQRHAKIDNIDVIITRCGYTGEDGFEISVSNSNAVRLAKILLDTGVEGVKCAGLGARD 263
Query: 429 SL 430
SL
Sbjct: 264 SL 265
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
KRR+E GGFPGA++IQ Q+K GVS+KR G G P R + + +++G +TSG S
Sbjct: 295 KRRKEAGGFPGAAVIQKQLKEGVSKKRVGLIVEGPPARENTVLVDEAGKQIGHVTSGTLS 354
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P K++I+M Y+ +SK G +++ +R +++ V+KMPFV +NY
Sbjct: 355 PMTKQSISMCYLNTEHSKNGTKVFASIRGRQIPAVVSKMPFVPTNY 400
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
FK+ GKD+ L+ + E++ LIAVQGP + +I+ + LDLS++ FMT R I I
Sbjct: 161 EFKATGKDVSLELM--EDQALIAVQGPSTESIVSKLAKLDLSNMEFMTQRHAKIDNIDVI 218
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSD--EDVKLAGLGARDSL 555
+TR GYTGEDG EISV + + LL E VK AGLGARDSL
Sbjct: 219 ITRCGYTGEDGFEISVSNSNAVRLAKILLDTGVEGVKCAGLGARDSL 265
>gi|170723393|ref|YP_001751081.1| glycine cleavage system T protein [Pseudomonas putida W619]
gi|169761396|gb|ACA74712.1| glycine cleavage system T protein [Pseudomonas putida W619]
Length = 373
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 149/234 (63%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+TPL+ LHL G +MVPFAGF MPVQY + + HLHTR + +FDVSHM Q ++ GK
Sbjct: 6 HKTPLHALHLELGARMVPFAGFDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIILRGK 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + LES+ D+ +L G ++FTNEQGGI DDL+V +D+LFLV NA+ ++ D
Sbjct: 65 NAAQALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLFLVVNAACKEQD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + +G +Q L EER L+A+QGP + T+L R +++ + FM RP
Sbjct: 125 LAHLQ------QHIGDRCQIQPLF-EERALLALQGPAAVTVLARLAP-EVAGMTFMQLRP 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
++ G C ++R+GYTGEDG EISVP + + LL++ +V+ GLGARDSL
Sbjct: 177 VSLLGEDCFVSRSGYTGEDGYEISVPAKAAEALARRLLAEPEVQPIGLGARDSL 230
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR GGFPGA ++ +Q ++GV+RKR G P+R G EI +
Sbjct: 250 VEASLLWAVSKVRRADGARAGGFPGADVVFAQQQAGVARKRVGLLPQERTPVREGAEIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+D+ VG ++SG P+L +AMGY+E + + L+ VR K+V +KV+K PFV
Sbjct: 310 ASDKPVGKVSSGGFGPTLGAPVAMGYVEIEHGALDTSLFALVRGKKVALKVSKTPFVAQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM RP ++ G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVTVLARLAP-EVAGMTFMQLRPVSLLGEDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL++ +V+ GLGARDSL
Sbjct: 202 PAKAAEALARRLLAEPEVQPIGLGARDSL 230
>gi|414585371|tpg|DAA35942.1| TPA: hypothetical protein ZEAMMB73_106697 [Zea mays]
Length = 432
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 149/259 (57%), Gaps = 28/259 (10%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H++HGGKMVPFAG+SMP+QY SI S ++ R+ S+FDV+HM + G+
Sbjct: 38 KRTALYDFHVAHGGKMVPFAGWSMPIQY-RDSIMDSTVNCRANGSLFDVAHMCGLSLKGR 96
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LES+ VADV L G GTL++FTNEQGG DD ++ K + ++LV NA R D
Sbjct: 97 GAIPFLESLVVADVAALRDGTGTLTVFTNEQGGAIDDSVIAKVTDHHIYLVVNAGCRDKD 156
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A + F G D+ ++R L+A+QGPL++ LQ T DLS +YF +
Sbjct: 157 LAHIEAHMEAFNKKGGDVKWHI--HDDRSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKM 214
Query: 377 CTIAGIPCTLTRAG-----------------------YTGEDGVEISVPGEQCTHIVEAL 413
I G C LTR G YTGEDG EISVP E + EA+
Sbjct: 215 IDINGYACFLTRTGYHFDSLSPLFEQYCKDCLISYFSYTGEDGFEISVPSENAVDLAEAI 274
Query: 414 L--SDEDVKLAGLGARDSL 430
L S+ V+L GLGARDSL
Sbjct: 275 LERSEGKVRLTGLGARDSL 293
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 68/110 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R G + G P R E+ + + +R+G +TSG
Sbjct: 322 GKRRRAEGGFLGADVILKQLQEGPKIRRVGMVTQGPPARSHSELVSGSGERIGEVTSGGF 381
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G EL V VR K D VTKMPFV + YY P
Sbjct: 382 SPCLKKNIAMGYVKSGMHKAGTELKVVVRGKSYDAVVTKMPFVPTKYYKP 431
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 65/131 (49%), Gaps = 27/131 (20%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ F G D+ ++R L+A+QGPL++ LQ T DLS +YF + I G C
Sbjct: 165 EAFNKKGGDVKWHI--HDDRSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGYAC 222
Query: 510 TLTRAG-----------------------YTGEDGVEISVPGEQCTHIVEALL--SDEDV 544
LTR G YTGEDG EISVP E + EA+L S+ V
Sbjct: 223 FLTRTGYHFDSLSPLFEQYCKDCLISYFSYTGEDGFEISVPSENAVDLAEAILERSEGKV 282
Query: 545 KLAGLGARDSL 555
+L GLGARDSL
Sbjct: 283 RLTGLGARDSL 293
>gi|313225569|emb|CBY07043.1| unnamed protein product [Oikopleura dioica]
Length = 375
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 163/299 (54%), Gaps = 34/299 (11%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL++LH M FAGF MP+ Y +S HTR+ S+FDVSHMLQT +TG+
Sbjct: 14 RKTPLWNLHKEKNATMAEFAGFDMPMIYKVIS------HTRTACSIFDVSHMLQTRITGE 67
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ES+C ADV L G+L+LFTN+QGGI DDLIV K + +++VSNAS + D
Sbjct: 68 SAIAAIESVCTADVAALSDNSGSLALFTNQQGGILDDLIVNKISSEEIYVVSNASMAEQD 127
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
++ A + F D L+ + E LIAVQGP ++ +LQ+ T LDLS L FM
Sbjct: 128 FAILKNAAEIF-----DCKLEKI---ETALIAVQGPKAAELLQKGTSLDLSKLSFMQGAD 179
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL----- 430
T+ G TR GYTGEDG E+S+P E I + L+ D + +AGLGARD+L
Sbjct: 180 LTLFGTSGIRATRCGYTGEDGFELSIPAEAVETITKQLIEDGAL-MAGLGARDTLRLEAG 238
Query: 431 ----SGDITLNTPVPHGSL-------KLSNDRFKSLGKDIHLQFLSPEER--GLIAVQG 476
DI T P L + + F + + Q PEE+ GLI +G
Sbjct: 239 LCLYGNDIDETTLPPSAVLLFTVPKSRRAQGNFPGCAEIVKQQKTKPEEKRVGLIFQKG 297
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 7 LLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVG 64
LL K RR G FPG + I Q K+ KR G F P R G E+FN + +++G
Sbjct: 257 LLFTVPKSRRAQGNFPGCAEIVKQQKTKPEEKRVGLIFQKGKPPARQGAELFN-DGEKIG 315
Query: 65 AITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
+TSG PSP+L +NI MGY+ +K G +L V+VR D +VTKMPFVK NY+T
Sbjct: 316 RVTSGGPSPTLGRNIGMGYVPLELTKPGTKLQVKVRKNIFDAEVTKMPFVKCNYFT 371
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISV 526
E LIAVQGP ++ +LQ+ T LDLS L FM T+ G TR GYTGEDG E+S+
Sbjct: 146 ETALIAVQGPKAAELLQKGTSLDLSKLSFMQGADLTLFGTSGIRATRCGYTGEDGFELSI 205
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E I + L+ D + +AGLGARD+L
Sbjct: 206 PAEAVETITKQLIEDGAL-MAGLGARDTL 233
>gi|70731985|ref|YP_261727.1| glycine cleavage system protein T [Pseudomonas protegens Pf-5]
gi|68346284|gb|AAY93890.1| aminomethyltransferase [Pseudomonas protegens Pf-5]
Length = 374
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 148/233 (63%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q ++ G +
Sbjct: 8 KTPLHSLHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQILLRGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNEQGGI DDL+V ++ LFLV NA+ + D+
Sbjct: 67 AAQALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDEQLFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + LG+ +Q L EER L+A+QGP + T+L R +++ + FM +P
Sbjct: 127 -----AHLR-RHLGEQCDIQPLF-EERALLALQGPAAVTVLARLAP-EVAQMTFMQFKPV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+ C ++R+GYTGEDG EISVP Q + ALL++ +V GLGARDSL
Sbjct: 179 TLLGVDCFVSRSGYTGEDGFEISVPAAQAEKLARALLAEPEVAAIGLGARDSL 231
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
+ LG+ +Q L EER L+A+QGP + T+L R +++ + FM +P T+ G+ C ++
Sbjct: 131 RHLGEQCDIQPLF-EERALLALQGPAAVTVLARLAP-EVAQMTFMQFKPVTLLGVDCFVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISVP Q + ALL++ +V GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVPAAQAEKLARALLAEPEVAAIGLGARDSL 231
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA +I +Q + GVSRKR G P+R G EI +
Sbjct: 251 IQASLLWAISKARRADGARAGGFPGAEVIFAQQQGGVSRKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A + +G++ SG P+L +AMGY++ + + + VR K+V + V+KMPFV
Sbjct: 311 AQGKVIGSVCSGGFGPTLGGPLAMGYLDIEHCALDTPVAAIVRGKKVPMLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
>gi|159469919|ref|XP_001693107.1| glycine cleavage system, T protein [Chlamydomonas reinhardtii]
gi|158277365|gb|EDP03133.1| glycine cleavage system, T protein [Chlamydomonas reinhardtii]
Length = 409
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 184 TFVFSPGSSP-SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSV 242
+ +F+ G + S+ ++T LYD H++HGGKMV FAG+++P+QY SI S H R S+
Sbjct: 19 SLLFTRGYADLSSLKKTMLYDFHVAHGGKMVDFAGWALPIQYKD-SIMDSTTHCRQNASL 77
Query: 243 FDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED 302
FDVSHM + GK ++LE + V D+ L G G+LS FTNE+GGI DD ++TK
Sbjct: 78 FDVSHMCGFSLKGKDAIQFLEGLVVGDIAGLKDGTGSLSAFTNEKGGIIDDTVITKVNGQ 137
Query: 303 SLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT 362
++ V NA R D+ + KS G D+ + ++R L+A+QGP ++ ++
Sbjct: 138 HIYTVVNAGCRDKDLAHLSKHLAAAKSKGLDVAMTV--HDDRSLLALQGPAAAEVVAGLV 195
Query: 363 --DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVK 420
+DL ++YF +P + GIPC +TR GYTGEDG EISVP + E L +++ V+
Sbjct: 196 APGVDLKAMYFSDFKPIDLGGIPCWVTRTGYTGEDGFEISVPNSHAVALAEKLTANKRVR 255
Query: 421 LAGLGARDSLSGDITLN----------TPVPHGSL----KLSNDRFKSLGKDI 459
+AGLG RDSL + L TPV G K ++F LG DI
Sbjct: 256 MAGLGPRDSLRLEAGLCLYGNDLNEDLTPVEAGLAWTIGKRRREKFDFLGGDI 308
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 71/115 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRRE F G II+ Q+ GVS++R GF STG P R + + + VG ITSG
Sbjct: 294 GKRRREKFDFLGGDIIKKQLAEGVSKRRVGFVSTGAPARQHSVVSTPDGKVVGEITSGAF 353
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRK 126
SP LKKNIAMGY++ ++K G L V VR K D VTKMPFV + YY P+ K
Sbjct: 354 SPCLKKNIAMGYVDKDFAKAGTALKVEVRGKVNDAVVTKMPFVPTPYYKRPEPAK 408
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHT--DLDLSSLYFMTSRPCTIAGIPCT 510
KS G D+ + ++R L+A+QGP ++ ++ +DL ++YF +P + GIPC
Sbjct: 163 KSKGLDVAMTV--HDDRSLLALQGPAAAEVVAGLVAPGVDLKAMYFSDFKPIDLGGIPCW 220
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDG EISVP + E L +++ V++AGLG RDSL
Sbjct: 221 VTRTGYTGEDGFEISVPNSHAVALAEKLTANKRVRMAGLGPRDSL 265
>gi|390596931|gb|EIN06332.1| glycine cleavage system T protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 407
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 150/251 (59%), Gaps = 8/251 (3%)
Query: 185 FVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFD 244
F + +SP ++T LYD H+ HG KMVPFAG++MP+ YG+V ASH H RS +FD
Sbjct: 21 FAIASDASPGELRKTGLYDFHVEHGAKMVPFAGYAMPLSYGSVGAVASHNHVRSSAGLFD 80
Query: 245 VSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSL 304
V HM+QT G +LE + + + L TLS+ NE+GGI DD I+TK +D+
Sbjct: 81 VGHMVQTNFRGGSTTAFLEHLTPSSLGPLQAYSSTLSVLLNERGGIIDDTILTKHADDAF 140
Query: 305 FLVSNASRRKVDMDLMVAAQDRFK--SLGKD---IHLQFLSAEERGLIAVQGPLSSTILQ 359
++V+NA RR+ D+ + + ++ K+ + ++ L E GL+A+QGP +++ LQ
Sbjct: 141 YVVTNAGRRERDLTWFATQLEEWNAGAVAKEKGRVEMEVL--EGWGLLALQGPKAASYLQ 198
Query: 360 RHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDV 419
+ T DL +L F S I G + R GYTGEDG EIS+P Q + + +LS + +
Sbjct: 199 QLTSFDLRNLTFGKSAFVPIEGFHLHVARGGYTGEDGFEISIPPSQTVEVAQ-MLSKDPI 257
Query: 420 KLAGLGARDSL 430
+L GLGARDSL
Sbjct: 258 QLTGLGARDSL 268
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
GK RR++G F GA ++ +++G R+R GF G P R G +I + + +G +TSG
Sbjct: 297 GKERRKSGDFIGAEGVRKHLENGPPRRRVGFIVEGAPARHGAKILAPGSGEELGVVTSGI 356
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGY++ + K G E+ + VR+K VT MPFV +NYY
Sbjct: 357 PSPTLGKNIAMGYVKNGHHKKGTEVEIEVRNKLRKAVVTPMPFVPTNYY 405
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E GL+A+QGP +++ LQ+ T DL +L F S I G + R GYTGEDG EIS+
Sbjct: 181 EGWGLLALQGPKAASYLQQLTSFDLRNLTFGKSAFVPIEGFHLHVARGGYTGEDGFEISI 240
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P Q + + +LS + ++L GLGARDSL
Sbjct: 241 PPSQTVEVAQ-MLSKDPIQLTGLGARDSL 268
>gi|169848891|ref|XP_001831150.1| aminomethyltransferase [Coprinopsis cinerea okayama7#130]
gi|116507877|gb|EAU90772.1| aminomethyltransferase [Coprinopsis cinerea okayama7#130]
Length = 410
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 142/236 (60%), Gaps = 3/236 (1%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H+++G KMVPFAG+SMP+ YG V ASH H R+ V +FDV HM+Q+ G
Sbjct: 38 KRTGLYDFHVANGAKMVPFAGYSMPLAYGDVGQVASHNHVRNSVGLFDVGHMVQSNFRGA 97
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+LE + + + L TLSL NE+GGI DD I+TK D+ ++V+NA RR+ D
Sbjct: 98 TATEFLEWLTPSSLSSLPAYSSTLSLLLNEKGGIIDDTIITKHAADAFYVVTNAGRRERD 157
Query: 317 MDLMVAAQDRFKS--LGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
+ + + + + GK ++ E GL+A+QGP +++ LQ T DL+ L F +
Sbjct: 158 LAWIKEKLEEWNNSEAGKKGPVELEVLENWGLLALQGPKAASYLQSLTSFDLNQLLFGKA 217
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G + R GYTGEDG EIS+P Q T V LLS V+L GLGARDSL
Sbjct: 218 AFVPIEGFNLHVARGGYTGEDGFEISIPPSQ-TEEVARLLSKNPVQLTGLGARDSL 272
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 67/107 (62%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
K RRE G F GA I+ QIK G SR+R G G P R G +I ++ +G +TSG PS
Sbjct: 302 KERREAGEFIGADAIRKQIKEGPSRRRIGLIVEGAPARQGAKIVGPGNEEIGVVTSGIPS 361
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P+L KNIAMGY++ K G EL V VR++ VT +PFVK+NYY
Sbjct: 362 PTLGKNIAMGYVKNGLHKKGTELQVDVRNRLRKAVVTPLPFVKANYY 408
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA 505
KL GK ++ E GL+A+QGP +++ LQ T DL+ L F + I
Sbjct: 164 KLEEWNNSEAGKKGPVELEVLENWGLLALQGPKAASYLQSLTSFDLNQLLFGKAAFVPIE 223
Query: 506 GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G + R GYTGEDG EIS+P Q T V LLS V+L GLGARDSL
Sbjct: 224 GFNLHVARGGYTGEDGFEISIPPSQ-TEEVARLLSKNPVQLTGLGARDSL 272
>gi|89095375|ref|ZP_01168291.1| glycine cleavage system T protein [Neptuniibacter caesariensis]
gi|89080380|gb|EAR59636.1| glycine cleavage system T protein [Oceanospirillum sp. MED92]
Length = 371
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 147/233 (63%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLYDLH+ GGKMVPFAGF MPVQY + + H+HTR +FDVSHM Q ++ G++
Sbjct: 6 KTPLYDLHVELGGKMVPFAGFEMPVQY-PLGVKKEHVHTRDHAGLFDVSHMGQVILKGEN 64
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE + D+ +L GK +LFTN++GGI DDL+VT D L++V NA+ ++ D+
Sbjct: 65 AAAELEKLVPVDIIDLPAGKQRYALFTNDEGGIMDDLMVT-NYGDHLYVVVNAACKEQDI 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
M A +LG+ + L+ L ++R L+A+QGP ++ L R +++ L FM SR
Sbjct: 124 AHMQA------NLGEGVELEVL--DDRALVALQGPEAAQALSRICP-EVNELVFMDSRHI 174
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EIS+P + + L +V+ GLGARDSL
Sbjct: 175 AIDGVDCFVSRSGYTGEDGYEISIPSAEAERLCRLFLEQPEVEFIGLGARDSL 227
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA I QI + +RKR G ++G PIR G ++ NA +++G +TSG P++
Sbjct: 266 AGGFPGAEKILDQIANKNYTRKRVGLIASGKAPIREGADLVNAEGEKIGVVTSGSFGPTV 325
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K +AMGY+E AYS + E++ VR K++ + V+K PF++ YY
Sbjct: 326 GKPVAMGYVETAYSVLETEVFAVVRGKQMPMVVSKAPFIQQRYY 369
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+LG+ + L+ L ++R L+A+QGP ++ L R +++ L FM SR I G+ C ++R
Sbjct: 129 NLGEGVELEVL--DDRALVALQGPEAAQALSRICP-EVNELVFMDSRHIAIDGVDCFVSR 185
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EIS+P + + L +V+ GLGARDSL
Sbjct: 186 SGYTGEDGYEISIPSAEAERLCRLFLEQPEVEFIGLGARDSL 227
>gi|359322416|ref|XP_542460.3| PREDICTED: aminomethyltransferase, mitochondrial-like [Canis lupus
familiaris]
Length = 342
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/246 (46%), Positives = 153/246 (62%), Gaps = 9/246 (3%)
Query: 190 GSSPSAEQ----RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDV 245
G PS Q RTPLYD H +HG KM AG+S+PVQ+ I SHLHT S FDV
Sbjct: 33 GPEPSHPQDVLRRTPLYDFHPAHGRKMAALAGWSLPVQHQDSHID-SHLHTLQHCSFFDV 91
Query: 246 SHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLF 305
SHMLQT + G R + +ES+ V D+ EL P +GTL LFTN+ GGI+DDLIVT E L+
Sbjct: 92 SHMLQTKILGCDRVKLMESLVVGDIAELRPNQGTLLLFTNKAGGIKDDLIVTSASEGHLY 151
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD 365
++SNA D+ L+ +++G D+ L+ + + L+A+QGP ++ +LQ D
Sbjct: 152 VLSNAGCWDKDLALIQGKVRELQNMGNDVSLEVV---DNALLALQGPTAAQVLQAGVADD 208
Query: 366 LSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
L L F+TS + G+ C++TR G+TGE+GV ISVP H+ ALL + +VKLAGL
Sbjct: 209 LKKLPFITSAVMEVFGVSGCSVTRYGHTGENGVGISVPAAAAVHLAAALLENPEVKLAGL 268
Query: 425 GARDSL 430
ARDSL
Sbjct: 269 AARDSL 274
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-C 509
+++G D+ L+ + + L+A+QGP ++ +LQ DL L F+TS + G+ C
Sbjct: 172 ELQNMGNDVSLEVV---DNALLALQGPTAAQVLQAGVADDLKKLPFITSAVMEVFGVSGC 228
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
++TR G+TGE+GV ISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 229 SVTRYGHTGENGVGISVPAAAAVHLAAALLENPEVKLAGLAARDSL 274
>gi|302820605|ref|XP_002991969.1| hypothetical protein SELMODRAFT_162066 [Selaginella moellendorffii]
gi|300140211|gb|EFJ06937.1| hypothetical protein SELMODRAFT_162066 [Selaginella moellendorffii]
Length = 409
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 147/238 (61%), Gaps = 9/238 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+ +G KMVPFAG+SMP+ Y +I S L+ R S+FDVSHM + GK
Sbjct: 38 KKTVLYDFHVENGAKMVPFAGWSMPLLY-KDTILNSTLNCRQNGSLFDVSHMCGLTLKGK 96
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE++ V D+ L G TLS FTNE+GG DD ++TK + ++LV NA R D
Sbjct: 97 DAIPFLETLVVGDIAGLSDGSCTLSAFTNEKGGTIDDTVITKVKDGHVYLVVNAGCRDKD 156
Query: 317 MDLMVAAQDRFKSLGKDI--HLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
+ + + +KS GKD+ H+ +ER L+A+QGPL+++ LQ DLS +YF
Sbjct: 157 LAHIGKHLEAYKSKGKDVSSHVH----DERSLLALQGPLAASTLQHLVKEDLSKVYFGNF 212
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
R ++ G C +TR GYTGEDG EISVP E + +ALL S+ + L GLGARDSL
Sbjct: 213 RILSVNGAECFITRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKILLTGLGARDSL 270
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 71/111 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+K GVSRKR G S G P R I+NA+D+ +G +TSG
Sbjct: 299 GKRRRAEGGFLGADVILKQLKEGVSRKRVGMISEGAPARAHCPIYNASDEVIGEVTSGGF 358
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
SP LKKNIAMGY+ K G + V VRDK+ +TKMPFV + Y+ P
Sbjct: 359 SPCLKKNIAMGYVSTGNHKEGTPISVAVRDKKNAGVITKMPFVPAKYHKKP 409
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 8/110 (7%)
Query: 450 DRFKSLGKDI--HLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI 507
+ +KS GKD+ H+ +ER L+A+QGPL+++ LQ DLS +YF R ++ G
Sbjct: 165 EAYKSKGKDVSSHVH----DERSLLALQGPLAASTLQHLVKEDLSKVYFGNFRILSVNGA 220
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
C +TR GYTGEDG EISVP E + +ALL S+ + L GLGARDSL
Sbjct: 221 ECFITRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKILLTGLGARDSL 270
>gi|302816394|ref|XP_002989876.1| hypothetical protein SELMODRAFT_272095 [Selaginella moellendorffii]
gi|300142442|gb|EFJ09143.1| hypothetical protein SELMODRAFT_272095 [Selaginella moellendorffii]
Length = 409
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 147/238 (61%), Gaps = 9/238 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+ +G KMVPFAG+SMP+ Y +I S L+ R S+FDVSHM + GK
Sbjct: 38 KKTVLYDFHVENGAKMVPFAGWSMPLLY-KDTILNSTLNCRQNGSLFDVSHMCGLTLKGK 96
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE++ V D+ L G +LS FTNE+GG DD ++TK + ++LV NA R D
Sbjct: 97 DAIPFLETLVVGDIAGLSDGSCSLSAFTNEKGGTIDDTVITKVKDGHVYLVVNAGCRDKD 156
Query: 317 MDLMVAAQDRFKSLGKDI--HLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
+ + + +KS GKD+ H+ +ER L+A+QGPL+++ LQ DLS +YF
Sbjct: 157 LAHIGKHLEAYKSKGKDVSSHVH----DERSLLALQGPLAASTLQHLVKEDLSKVYFGNF 212
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
R ++ G C +TR GYTGEDG EISVP E + +ALL S+ + L GLGARDSL
Sbjct: 213 RILSVNGAECFITRTGYTGEDGFEISVPSEHALELAKALLEKSEGKILLTGLGARDSL 270
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 71/111 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+K GVSRKR G S G P R I+NA+D+ +G +TSG
Sbjct: 299 GKRRRAEGGFLGADVILKQLKEGVSRKRVGMISEGAPARAHCPIYNASDEVIGEVTSGGF 358
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
SP LKKNIAMGY+ K G + V VRDK+ +TKMPFV + Y+ P
Sbjct: 359 SPCLKKNIAMGYVSTGNHKEGTPISVAVRDKKNAGVITKMPFVPAKYHKKP 409
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 8/110 (7%)
Query: 450 DRFKSLGKDI--HLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI 507
+ +KS GKD+ H+ +ER L+A+QGPL+++ LQ DLS +YF R ++ G
Sbjct: 165 EAYKSKGKDVSSHVH----DERSLLALQGPLAASTLQHLVKEDLSKVYFGNFRILSVNGA 220
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
C +TR GYTGEDG EISVP E + +ALL S+ + L GLGARDSL
Sbjct: 221 ECFITRTGYTGEDGFEISVPSEHALELAKALLEKSEGKILLTGLGARDSL 270
>gi|58265092|ref|XP_569702.1| aminomethyltransferase, mitochondrial precursor [Cryptococcus
neoformans var. neoformans JEC21]
gi|134109355|ref|XP_776792.1| hypothetical protein CNBC2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259472|gb|EAL22145.1| hypothetical protein CNBC2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225934|gb|AAW42395.1| aminomethyltransferase, mitochondrial precursor, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 409
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 141/239 (58%), Gaps = 5/239 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+D H+ H KMVPFAG+SMP+ YG +H H RS +FDVSHMLQ TG
Sbjct: 30 KKTPLHDFHVQHKAKMVPFAGYSMPLSYGETGQITAHKHVRSDAGLFDVSHMLQHNFTGP 89
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+E+L ++C + + L P TLS+ NEQGGI DD I+TK + + ++V+NA R D
Sbjct: 90 TAQEFLLTLCPSSLDSLKPFTSTLSVLLNEQGGIIDDTIITKHSDSAFYVVTNAGRSVED 149
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + + K +++ + E GL+A+QGP + +LQR TD DL+ + F +S
Sbjct: 150 KAHISQKLEEWNAAHKGREVKWETLEGWGLLALQGPKAKDVLQRVTDQDLNKVKFGSSVF 209
Query: 377 CTI-----AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I + C + R GYTGEDG E+S+P E + + S DV L GLGARDSL
Sbjct: 210 ADIKTMDGQTVKCHVARGGYTGEDGFEVSIPPEHTLALSNTIASHPDVMLIGLGARDSL 268
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 12 GKRRRETGG---FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNA-NDQRVGAIT 67
GK RR FPG S I ++ +G SR+R GF G P R G ++ +A ++ +G IT
Sbjct: 297 GKDRRAPDAQPSFPGKSRILEELANGPSRRRVGFEVIGSPAREGCKVLDALGEKEIGVIT 356
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SG PSP+L NIAMGYI K G + V VR K D V MPFV + Y+
Sbjct: 357 SGIPSPTLGTNIAMGYIANGSHKKGTAVKVEVRKKLRDAFVKPMPFVPTKYF 408
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 442 HGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
H S KL G+++ + L E GL+A+QGP + +LQR TD DL+ + F +S
Sbjct: 152 HISQKLEEWNAAHKGREVKWETL--EGWGLLALQGPKAKDVLQRVTDQDLNKVKFGSSVF 209
Query: 502 CTI-----AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
I + C + R GYTGEDG E+S+P E + + S DV L GLGARDSL
Sbjct: 210 ADIKTMDGQTVKCHVARGGYTGEDGFEVSIPPEHTLALSNTIASHPDVMLIGLGARDSL 268
>gi|409041350|gb|EKM50836.1| hypothetical protein PHACADRAFT_153081 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 142/238 (59%), Gaps = 7/238 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+ + KMVPFAG+SMP+ YG+V ASH H R V +FDV HM+Q+ G
Sbjct: 36 RKTGLYDFHVGNDAKMVPFAGYSMPLSYGSVGAVASHNHVRESVGLFDVGHMMQSNFRGA 95
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++LE + + + L+P TLS+ NE+GGI DD ++TK +D+ ++V+NA RR D
Sbjct: 96 TASQFLEWLTPSSLSILEPYSSTLSVLLNEKGGIIDDTVITKHAQDAFYVVTNAGRRDRD 155
Query: 317 MDLMVAAQDRF----KSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ + + ++ G + L+ L + GL+A+QGP ++ LQ+ T DL L F
Sbjct: 156 LPWFQQKLEEWNASERAKGGKVELELL--DSWGLLALQGPEAANYLQKFTPYDLKKLTFG 213
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S I G + R GYTGEDG EISVP Q + LLS + V+L GLGARDSL
Sbjct: 214 KSAFVPIEGYNLHVARGGYTGEDGFEISVPPNQTVEVAR-LLSQDPVRLTGLGARDSL 270
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
GK RRE F GA+ + +K G R+R G G P R G +I + +++G +TSG
Sbjct: 299 GKDRREKADFIGAAGVLQHLKDGPPRRRIGLVIEGAPARQGAKIVEPTSGEQLGVVTSGQ 358
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGYI+ + + G E+ V VR+K + +PF K +Y
Sbjct: 359 PSPTLGKNIAMGYIKHGWHQKGKEVVVEVRNKPRQALLVPLPFYKPRFY 407
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 504
L+ N ++ G + L+ L + GL+A+QGP ++ LQ+ T DL L F S I
Sbjct: 163 LEEWNASERAKGGKVELELL--DSWGLLALQGPEAANYLQKFTPYDLKKLTFGKSAFVPI 220
Query: 505 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G + R GYTGEDG EISVP Q + LLS + V+L GLGARDSL
Sbjct: 221 EGYNLHVARGGYTGEDGFEISVPPNQTVEVAR-LLSQDPVRLTGLGARDSL 270
>gi|402699338|ref|ZP_10847317.1| glycine cleavage system T protein [Pseudomonas fragi A22]
Length = 374
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 146/239 (61%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTREHAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+++G LE++ D+ +L G ++FTNEQGGI DDL+V D LFLV NA+
Sbjct: 61 LLSGADAARALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDQLFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K LGK +Q L EER L+A+QGP + T+LQ +++S+ F
Sbjct: 121 CKDQDL-----AHLR-KHLGKYCDIQPLF-EERALLALQGPAAVTVLQGLAP-EVASMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M P T+ G C ++R+GYTGEDG EISVP + + LL+D V+ GLGARDSL
Sbjct: 173 MQFAPVTLLGTECYVSRSGYTGEDGFEISVPAQHAEALARHLLADPQVQAIGLGARDSL 231
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR GGFPGA II +Q ++GV+RKR G P+R G EI +
Sbjct: 251 VEASLLWAISKNRRAEGSRAGGFPGADIIFAQQQNGVARKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A +G + SG P+L +AMGY++ A++ + E+W VR K V +KV+K+PFV
Sbjct: 311 AEGTVIGNVCSGGFGPTLGAPLAMGYLDTAFTALDSEVWAIVRGKPVPLKVSKLPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K LGK +Q L EER L+A+QGP + T+LQ +++S+ FM P T+ G C ++
Sbjct: 131 KHLGKYCDIQPLF-EERALLALQGPAAVTVLQGLAP-EVASMTFMQFAPVTLLGTECYVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISVP + + LL+D V+ GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVPAQHAEALARHLLADPQVQAIGLGARDSL 231
>gi|398846143|ref|ZP_10603142.1| glycine cleavage system T protein [Pseudomonas sp. GM84]
gi|398252872|gb|EJN38030.1| glycine cleavage system T protein [Pseudomonas sp. GM84]
Length = 373
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 147/234 (62%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPL+ LH+ G +MVPFAGF MPVQY + + HLHTR + +FDVSHM Q ++ GK
Sbjct: 6 QKTPLHALHIELGARMVPFAGFDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIILRGK 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LES+ D+ +L G ++FTNEQGGI DDL+V +D+LFLV NA+ + D
Sbjct: 65 DAALALESLVPVDIVDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLFLVVNAACKDQD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + +G +Q L E+R L+A+QGP ++ +L+R +++ + FM RP
Sbjct: 125 LAHLQT------HIGSRCEVQPLF-EQRALLALQGPAAAKVLERLAP-EVAGMTFMQFRP 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP E + LL++ +V+ GLGARDSL
Sbjct: 177 VTLLGEHCFISRSGYTGEDGYEISVPVEAADALARRLLAEPEVQPIGLGARDSL 230
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q + GV+RKR G P+R G EI +
Sbjct: 250 IEASLLWAISKVRRADGARAGGFPGAEAIFAQQQHGVARKRVGLLPQERTPVREGAEIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D+ VG + SG P+L +AMGY++ + + L+ VR K+V +KV+KMPFV
Sbjct: 310 TTDKVVGKVCSGGFGPTLGAPVAMGYVDIEHGALDTPLYAMVRGKKVALKVSKMPFVPQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L+R +++ + FM RP T+ G C ++R+GYTGEDG EISV
Sbjct: 143 EQRALLALQGPAAAKVLERLAP-EVAGMTFMQFRPVTLLGEHCFISRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + LL++ +V+ GLGARDSL
Sbjct: 202 PVEAADALARRLLAEPEVQPIGLGARDSL 230
>gi|449548434|gb|EMD39401.1| hypothetical protein CERSUDRAFT_82124 [Ceriporiopsis subvermispora
B]
Length = 384
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 141/239 (58%), Gaps = 9/239 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD H+ +G KMVPFAG+SMP+ YG+V ASH H R V +FDVSHM+Q G
Sbjct: 11 RRTPLYDFHVENGAKMVPFAGYSMPLAYGSVGAIASHHHVRKSVGLFDVSHMVQHNFLGS 70
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE I + + +L P TLS+ NE+GGI DD ++TK +D+ ++V+NA RR D
Sbjct: 71 GATAFLEWITPSSLSKLAPYSSTLSVILNEKGGIIDDTVITKHADDAFYVVTNAGRRDRD 130
Query: 317 MDLMVAAQDRFKS-----LGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ + + + S GK H E+ GL+A+QGP ++ LQ T DL L F
Sbjct: 131 LAWIKERLEEWDSTRAAEAGKVEHEVL---EDWGLLALQGPEAAQYLQGLTSFDLRELTF 187
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G + R GYTGEDG EIS+P Q + + LLS V+L GLGARDSL
Sbjct: 188 GKSAFVPLEGYNLHVARGGYTGEDGFEISIPPSQTVEVAQ-LLSKPPVQLTGLGARDSL 245
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR-VGAITSGC 70
GK RRETG F GA ++ +K G R+R G P R G +IF + Q +GA+TSG
Sbjct: 274 GKERRETGDFIGAEGVRKHLKDGPPRRRIGIVVEEAPARQGAKIFAPSSQELIGAVTSGI 333
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGY++ Y K G EL V VR+K +T MPFV +NYY
Sbjct: 334 PSPTLGKNIAMGYVQSGYHKKGTELLVEVRNKLRKAVLTPMPFVPTNYY 382
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+ GL+A+QGP ++ LQ T DL L F S + G + R GYTGEDG EIS+
Sbjct: 158 EDWGLLALQGPEAAQYLQGLTSFDLRELTFGKSAFVPLEGYNLHVARGGYTGEDGFEISI 217
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P Q + + LLS V+L GLGARDSL
Sbjct: 218 PPSQTVEVAQ-LLSKPPVQLTGLGARDSL 245
>gi|392585992|gb|EIW75330.1| glycine cleavage system T protein [Coniophora puteana RWD-64-598
SS2]
Length = 392
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 138/239 (57%), Gaps = 8/239 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H+ +G KMVPFAGF MP+ YG V ASH H R+ +FDV HM+Q++ G
Sbjct: 18 RRTGLYDFHVENGAKMVPFAGFEMPLAYGNVGQVASHTHVRTSAGLFDVGHMVQSMFRGP 77
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+LE + + + L P TLS+ NE+GGI DD ++TK +D+ ++V+NA RR D
Sbjct: 78 TATEFLEWLTPSSLGGLAPYSSTLSVLLNERGGIIDDTVITKHAKDAFYVVTNAGRRDAD 137
Query: 317 MD-----LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
M L +R G + + L GL+A+QGP S+ LQ T DL L F
Sbjct: 138 MAWFKERLEEWNTERGGKGGGKVEWEVLDG--WGLVALQGPESAGYLQALTSFDLKGLTF 195
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G + R GYTGEDG EIS+P Q T V LL+ V+LAGLGARDSL
Sbjct: 196 GRSAFVPVEGFNLHVARGGYTGEDGFEISIP-PQHTETVTRLLTKSPVQLAGLGARDSL 253
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
GK RRE F GA + +K G R+R GF G P R G ++F + +G ITSG
Sbjct: 282 GKDRRENASFIGAQGVLKHLKEGPPRRRVGFVVEGAPARQGAKLFTPGGEASIGTITSGI 341
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGY+ K G E+ V VR+KR VT MPFVK NYY
Sbjct: 342 PSPTLGKNIAMGYVTSGNHKKGTEVEVEVRNKRRKAIVTPMPFVKPNYY 390
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 470 GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGE 529
GL+A+QGP S+ LQ T DL L F S + G + R GYTGEDG EIS+P
Sbjct: 169 GLVALQGPESAGYLQALTSFDLKGLTFGRSAFVPVEGFNLHVARGGYTGEDGFEISIP-P 227
Query: 530 QCTHIVEALLSDEDVKLAGLGARDSL 555
Q T V LL+ V+LAGLGARDSL
Sbjct: 228 QHTETVTRLLTKSPVQLAGLGARDSL 253
>gi|407773096|ref|ZP_11120397.1| glycine cleavage system T-protein (aminomethyltransferase)
[Thalassospira profundimaris WP0211]
gi|407283560|gb|EKF09088.1| glycine cleavage system T-protein (aminomethyltransferase)
[Thalassospira profundimaris WP0211]
Length = 388
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 147/233 (63%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LYDLH+ G KMVPFAG++MPVQY + + HLHTR+K +FDVSHM Q +TG++
Sbjct: 28 KTALYDLHVELGAKMVPFAGYAMPVQY-PLGVKGEHLHTRAKAGLFDVSHMGQVRLTGEN 86
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
R LE + D+ L PG+ S FT + G I DDL++T DSLFLV NA+ + D+
Sbjct: 87 RVAELEKLVPGDIAILKPGRTRYSAFTQDDGTILDDLMITNA-GDSLFLVINAACKDDDI 145
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
M A +LG + L+ + ++R L+A+QGP ++ +L R ++ L FM+
Sbjct: 146 VHMRA------NLGDGVSLEEI--DDRALLALQGPDAAKVLARFAP-SVADLKFMSFAEI 196
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
IAG PC +TR+GYTGEDG EISVP + LL++++V+ GLGARDSL
Sbjct: 197 DIAGSPCFVTRSGYTGEDGFEISVPNADAEALARKLLAEDEVEAIGLGARDSL 249
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+LG + L+ + ++R L+A+QGP ++ +L R ++ L FM+ IAG PC +TR
Sbjct: 151 NLGDGVSLEEI--DDRALLALQGPDAAKVLARFAP-SVADLKFMSFAEIDIAGSPCFVTR 207
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP + LL++++V+ GLGARDSL
Sbjct: 208 SGYTGEDGFEISVPNADAEALARKLLAEDEVEAIGLGARDSL 249
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR GGF GA +I Q++ G RKR G G P R +I NA+ + +G ITSG
Sbjct: 279 KRRRAEGGFKGADVILDQLEHGADRKRVGIKPEGKAPAREHTQILNADGEEIGEITSGGF 338
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P++ IAMGY+ +++ G ++ + VR K +V ++PF Y+
Sbjct: 339 GPTVDGPIAMGYVAIEFAEPGTKVDLMVRGKARPAEVVELPFAPHRYF 386
>gi|426196377|gb|EKV46305.1| hypothetical protein AGABI2DRAFT_193044 [Agaricus bisporus var.
bisporus H97]
Length = 405
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 137/238 (57%), Gaps = 7/238 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H+ HG KMVPFAG+SMP+ YG V A H H R KV VFDV HM+Q+ GK
Sbjct: 32 KRTGLYDFHVEHGAKMVPFAGYSMPLSYGNVGQVAGHNHVRQKVGVFDVGHMVQSNFRGK 91
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE + + + L+P TLS+ NE GGI DD ++TK D+ ++V+NA RR D
Sbjct: 92 TATGFLEWLTPSSLSSLNPYSSTLSVLLNENGGIIDDTMITKHANDAFYVVTNAGRRDRD 151
Query: 317 MDLMVAAQDRFK--SLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
+ + + GK+ ++ E GL+A+QGP ++ LQ T DL L F +
Sbjct: 152 LAWLKEKLGEWNGSEKGKEGPVELEILENWGLLALQGPEAAAYLQTLTSYDLRGLTFGKA 211
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEA--LLSDEDVKLAGLGARDSL 430
I G + R GYTGEDG EIS+P +H VE LLS V+L GLG RDSL
Sbjct: 212 AFVPIEGFNLHVARGGYTGEDGFEISIP---PSHTVEVAKLLSKSPVQLTGLGVRDSL 266
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAND-QRVGAITSGC 70
GK R+E G F GA ++ +K G R+R G G P R +IF + +GA+TSG
Sbjct: 295 GKDRKENGNFIGAEGVRKHLKEGPPRRRVGMIVEGAPARQHAKIFAPDSGDLLGAVTSGI 354
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L+KNIAMGY++ + K G E+ V VR++R +T MPF+K NY+
Sbjct: 355 PSPTLQKNIAMGYVKNGWHKKGTEVEVEVRNRRQKAVLTPMPFIKPNYW 403
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
GK+ ++ E GL+A+QGP ++ LQ T DL L F + I G + R G
Sbjct: 168 GKEGPVELEILENWGLLALQGPEAAAYLQTLTSYDLRGLTFGKAAFVPIEGFNLHVARGG 227
Query: 516 YTGEDGVEISVPGEQCTHIVEA--LLSDEDVKLAGLGARDSL 555
YTGEDG EIS+P +H VE LLS V+L GLG RDSL
Sbjct: 228 YTGEDGFEISIP---PSHTVEVAKLLSKSPVQLTGLGVRDSL 266
>gi|409081143|gb|EKM81502.1| hypothetical protein AGABI1DRAFT_111807 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 405
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 137/238 (57%), Gaps = 7/238 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H+ HG KMVPFAG+SMP+ YG V A H H R KV VFDV HM+Q+ GK
Sbjct: 32 KRTGLYDFHVEHGAKMVPFAGYSMPLSYGDVGQVAGHNHVRQKVGVFDVGHMVQSNFRGK 91
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE + + + L+P TLS+ NE GGI DD ++TK D+ ++V+NA RR D
Sbjct: 92 TATGFLEWLTPSSLSSLNPYSSTLSVLLNENGGIIDDTMITKHANDAFYVVTNAGRRDRD 151
Query: 317 MDLMVAAQDRFK--SLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
+ + + GK+ ++ E GL+A+QGP ++ LQ T DL L F +
Sbjct: 152 LAWLKEKLGEWNGSEKGKEGPVELEILENWGLLALQGPEAAAYLQTLTSYDLRGLTFGKA 211
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEA--LLSDEDVKLAGLGARDSL 430
I G + R GYTGEDG EIS+P +H VE LLS V+L GLG RDSL
Sbjct: 212 AFVPIEGFNLHVARGGYTGEDGFEISIP---PSHTVEVAKLLSKSPVQLTGLGVRDSL 266
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAND-QRVGAITSGC 70
GK R+E G F GA ++ +K G R+R G G P R +IF + +GA+TSG
Sbjct: 295 GKDRKENGNFIGAEGVRKHLKEGPPRRRVGMIVEGAPARQHAKIFAPDSGDLLGAVTSGI 354
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L+KNIAMGY++ + K G E+ V VR++R +T MPF+K NY+
Sbjct: 355 PSPTLQKNIAMGYVKNGWHKKGTEVEVEVRNRRQKAVLTPMPFIKPNYW 403
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
GK+ ++ E GL+A+QGP ++ LQ T DL L F + I G + R G
Sbjct: 168 GKEGPVELEILENWGLLALQGPEAAAYLQTLTSYDLRGLTFGKAAFVPIEGFNLHVARGG 227
Query: 516 YTGEDGVEISVPGEQCTHIVEA--LLSDEDVKLAGLGARDSL 555
YTGEDG EIS+P +H VE LLS V+L GLG RDSL
Sbjct: 228 YTGEDGFEISIP---PSHTVEVAKLLSKSPVQLTGLGVRDSL 266
>gi|325185478|emb|CCA19961.1| unnamed protein product [Albugo laibachii Nc14]
Length = 412
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/244 (45%), Positives = 144/244 (59%), Gaps = 17/244 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTR--SKVSVFDVSHMLQTVVT 254
+RTPLYDLHL GGKMV FAG+SMPVQY I SHLHTR K S+FDVSHM Q +T
Sbjct: 36 KRTPLYDLHLERGGKMVNFAGYSMPVQY-TDGIVKSHLHTRMTGKSSLFDVSHMGQLRIT 94
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G RE +LES+ VAD+ + G+ LSL TN+ GGI DD ++TK ED ++V NA +
Sbjct: 95 GHDREVFLESLVVADLAAAEIGEAKLSLLTNQNGGIIDDCVITK-YEDHFYVVVNAGNKG 153
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTIL--QRHTDLDLSSLYFM 372
D+ M ++FK D +++ L E+R L+A+QGP + L + +D L FM
Sbjct: 154 NDLQHMHRELEQFKG---DANIEIL--EDRALVALQGPGAVDALRDEMFASVDFEELEFM 208
Query: 373 T------SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
+ + G+ LTR GYTGEDG E+S+P LL + V AGLGA
Sbjct: 209 NGLYTSITSSSALKGLDVILTRCGYTGEDGFELSIPSAHVEQFTRQLLRYDSVLEAGLGA 268
Query: 427 RDSL 430
RDSL
Sbjct: 269 RDSL 272
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGV-SRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPG +II Q+K+ S+KR GF S G R G ++++N + VG +TSG
Sbjct: 302 KRRREQGGFPGHAIIMDQLKNKTFSQKRVGFGSEGTTFRTGTTLYDSNGRTVGKVTSGTF 361
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP L+ I M YI+ +K+G E+ + R+K + +TKMPFV S+YY
Sbjct: 362 SPCLQSPIGMAYIDKDAAKIGSEVRAKGRNKEHVLSITKMPFVPSHYY 409
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 434 ITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTIL--QRHTDLDL 491
+ +N L+ + + D +++ L E+R L+A+QGP + L + +D
Sbjct: 145 VVVNAGNKGNDLQHMHRELEQFKGDANIEIL--EDRALVALQGPGAVDALRDEMFASVDF 202
Query: 492 SSLYFMT------SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVK 545
L FM + + G+ LTR GYTGEDG E+S+P LL + V
Sbjct: 203 EELEFMNGLYTSITSSSALKGLDVILTRCGYTGEDGFELSIPSAHVEQFTRQLLRYDSVL 262
Query: 546 LAGLGARDSL 555
AGLGARDSL
Sbjct: 263 EAGLGARDSL 272
>gi|83594381|ref|YP_428133.1| glycine cleavage system aminomethyltransferase T [Rhodospirillum
rubrum ATCC 11170]
gi|83577295|gb|ABC23846.1| Glycine cleavage system T protein [Rhodospirillum rubrum ATCC
11170]
Length = 375
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 145/232 (62%), Gaps = 10/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL G +MVPFAG+ MPVQY + + A HLHTR+ +FDVSHM Q + G R
Sbjct: 15 TPLHALHLERGARMVPFAGYDMPVQY-PMGVLAEHLHTRASAGLFDVSHMGQARLVGPQR 73
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ L G+ ++ TN+QGGI DDL+VTK +D LFLV NA+ + D+D
Sbjct: 74 IAALEALVPGDLEILKEGRQRYTVLTNDQGGILDDLMVTKRADD-LFLVVNAACKDADLD 132
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A F D L+ L + L+A+QGPL+ ++L D + + FM+ R +
Sbjct: 133 HIEAHLAGF-----DARLERLP--DTALLALQGPLAVSVLA-GLDARAAEMGFMSGRWLS 184
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR+GYTGEDG EISVP E + + L+++E V L GLGARDSL
Sbjct: 185 LCGVDCFVTRSGYTGEDGFEISVPAEAALDLAQTLIANEAVALIGLGARDSL 236
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGC 70
GKRRR GGFPGAS IQ + G R R G G P+R I + VG +TSG
Sbjct: 265 GKRRRAEGGFPGASAIQQDLAQGPKRCRVGLRPEGKAPVRAHSAILGPQGEVVGEVTSGG 324
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSL IAMG + + G + + VR K + V +MPFV Y+
Sbjct: 325 FSPSLSAPIAMGMVPAELAAPGTAVSLVVRGKALPAHVVEMPFVAHRYH 373
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
G D L+ L + L+A+QGPL+ ++L D + + FM+ R ++ G+ C +TR+G
Sbjct: 140 GFDARLERLP--DTALLALQGPLAVSVLA-GLDARAAEMGFMSGRWLSLCGVDCFVTRSG 196
Query: 516 YTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
YTGEDG EISVP E + + L+++E V L GLGARDSL
Sbjct: 197 YTGEDGFEISVPAEAALDLAQTLIANEAVALIGLGARDSL 236
>gi|386351137|ref|YP_006049385.1| glycine cleavage system aminomethyltransferase T [Rhodospirillum
rubrum F11]
gi|346719573|gb|AEO49588.1| glycine cleavage system aminomethyltransferase T [Rhodospirillum
rubrum F11]
Length = 371
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 145/232 (62%), Gaps = 10/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL G +MVPFAG+ MPVQY + + A HLHTR+ +FDVSHM Q + G R
Sbjct: 11 TPLHALHLERGARMVPFAGYDMPVQY-PMGVLAEHLHTRASAGLFDVSHMGQARLVGPQR 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ L G+ ++ TN+QGGI DDL+VTK +D LFLV NA+ + D+D
Sbjct: 70 IAALEALVPGDLEILKEGRQRYTVLTNDQGGILDDLMVTKRADD-LFLVVNAACKDADLD 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A F D L+ L + L+A+QGPL+ ++L D + + FM+ R +
Sbjct: 129 HIEAHLAGF-----DARLERLP--DTALLALQGPLAVSVLA-GLDARAAEMGFMSGRWLS 180
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR+GYTGEDG EISVP E + + L+++E V L GLGARDSL
Sbjct: 181 LCGVDCFVTRSGYTGEDGFEISVPAEAALDLAQTLIANEAVALIGLGARDSL 232
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGC 70
GKRRR GGFPGAS IQ + G R R G G P+R I + VG +TSG
Sbjct: 261 GKRRRAEGGFPGASAIQQDLAQGPKRCRVGLRPEGKAPVRAHSAILGPQGEVVGEVTSGG 320
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSL IAMG + + G + + VR K + V +MPFV Y+
Sbjct: 321 FSPSLSAPIAMGMVPAELAAPGTAVSLVVRGKALPAHVVEMPFVAHRYH 369
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
G D L+ L + L+A+QGPL+ ++L D + + FM+ R ++ G+ C +TR+G
Sbjct: 136 GFDARLERLP--DTALLALQGPLAVSVLA-GLDARAAEMGFMSGRWLSLCGVDCFVTRSG 192
Query: 516 YTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
YTGEDG EISVP E + + L+++E V L GLGARDSL
Sbjct: 193 YTGEDGFEISVPAEAALDLAQTLIANEAVALIGLGARDSL 232
>gi|348678394|gb|EGZ18211.1| hypothetical protein PHYSODRAFT_559209 [Phytophthora sojae]
Length = 400
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 158/261 (60%), Gaps = 15/261 (5%)
Query: 178 SFFSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTR 237
S F L FS +S + ++TPLYDLH++ GGKMVPFAG++MPVQY A + SHLHTR
Sbjct: 7 SAFRALRRGFSSSASSAPLKKTPLYDLHVALGGKMVPFAGYAMPVQYKA-GVLQSHLHTR 65
Query: 238 SK--VSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLI 295
+ S+FDVSHM Q +TG R +LES+ V D+ L G+ LSL TN+QGGI DD +
Sbjct: 66 EQGCASLFDVSHMGQLRITGADRLRFLESVVVGDLEALGSGEAKLSLITNDQGGILDDCV 125
Query: 296 VTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSS 355
+++ +D L++V NA + D+ M Q ++ D L+ + +R L+A+QGP ++
Sbjct: 126 ISR-YDDHLYVVVNAGNQDADVAHM---QQLLENFQGDARLERIP--DRALVALQGPGAA 179
Query: 356 TILQ-RHTDLDLSSLYFMTS--RPCTIAG---IPCTLTRAGYTGEDGVEISVPGEQCTHI 409
+++ +++L L FM P T+ + LTR GYTGEDG EISV +
Sbjct: 180 DVVELLKPNMNLKDLEFMHGVFTPLTLKSGQTLDVILTRCGYTGEDGFEISVLSKDSETF 239
Query: 410 VEALLSDEDVKLAGLGARDSL 430
AL+ DE V AGLGARDSL
Sbjct: 240 ARALIQDERVLEAGLGARDSL 260
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSG-VSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGC 70
GKRRRE GGFPG +II Q+K+ ++KR GF G R G E+++A+D VG +TSG
Sbjct: 289 GKRRREEGGFPGHAIIMDQLKNKTATKKRVGFVVEGAAAREGAELYDADDNVVGHVTSGT 348
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSLKK I M Y++ + K+G EL V+ R K +TKMPFV +NYY
Sbjct: 349 FSPSLKKAIGMAYVDKSLGKLGTELHVKARKKTQKAVITKMPFVPANYY 397
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 468 ERGLIAVQGPLSSTILQR-HTDLDLSSLYFMTS--RPCTIAG---IPCTLTRAGYTGEDG 521
+R L+A+QGP ++ +++ +++L L FM P T+ + LTR GYTGEDG
Sbjct: 167 DRALVALQGPGAADVVELLKPNMNLKDLEFMHGVFTPLTLKSGQTLDVILTRCGYTGEDG 226
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISV + AL+ DE V AGLGARDSL
Sbjct: 227 FEISVLSKDSETFARALIQDERVLEAGLGARDSL 260
>gi|153836376|ref|ZP_01989043.1| glycine cleavage system T protein [Vibrio parahaemolyticus AQ3810]
gi|149750278|gb|EDM61023.1| glycine cleavage system T protein [Vibrio parahaemolyticus AQ3810]
Length = 376
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 147/233 (63%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G+
Sbjct: 11 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGEG 69
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L+ GK + FTNE+GGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 70 AATFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 128
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L+ + E+R L+A+QGP ++T+L R +++ + FM R
Sbjct: 129 AHLKA------HLPSGVELEVI--EDRALLAIQGPQAATVLARFAS-EVADMLFMDIRKV 179
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP ++ + L ++E+V+ GLGARDSL
Sbjct: 180 EILGVECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSL 232
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 272 GGFPGADIILKQIETKDVARKRVGLVGQTKAPVREGVELFDADGAKIGIVTSGTAGPNAG 331
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 332 KPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 374
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++T+L R +++ + FM R I G+ C ++R+GYTGEDG EISV
Sbjct: 145 EDRALLAIQGPQAATVLARFAS-EVADMLFMDIRKVEILGVECIVSRSGYTGEDGYEISV 203
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L ++E+V+ GLGARDSL
Sbjct: 204 PADKAEELARKLTAEEEVEWIGLGARDSL 232
>gi|402225002|gb|EJU05064.1| glycine cleavage system T protein [Dacryopinax sp. DJM-731 SS1]
Length = 407
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
T LYD H+ HG KMVPFAGFSMP+ YG+V A+H H R+ V +FDV HM+Q+ + G
Sbjct: 37 TGLYDFHVKHGAKMVPFAGFSMPLSYGSVGQIAAHNHVRNSVGLFDVGHMVQSFIRGPSA 96
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+LE I + L LS+ N++GGI DD ++ + + + ++V+NA RR D+
Sbjct: 97 PAFLEWITPSGFASLPHFSSQLSVILNDRGGIIDDNVICRHDDTTYYVVTNAGRRVEDLA 156
Query: 319 LMVAAQDRF-KSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ +++ +S + ++ L E +GL+A+QGP + ++LQ+ T DL+ L+F S
Sbjct: 157 WLKEKIEQWNESRADKVEMEVL--ENQGLVALQGPEAPSVLQKLTPYDLTQLHFGKSTYA 214
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
IAG+ C + R GYTGEDG EIS+P E I E LL V++ GLGARDSL
Sbjct: 215 DIAGVRCHVARGGYTGEDGFEISIPKEHTVSITETLLQGP-VQMTGLGARDSL 266
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 65/110 (59%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
K RRE G F G+ + Q+K G ++R G P R G EIF+ + +G +TSG PS
Sbjct: 296 KSRREKGEFIGSGTVLEQLKDGPIKRRVGLIIDDAPAREGAEIFSDTQEPIGVVTSGIPS 355
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
P+L KNIAMGY++ + K G + V+VR+K +T MPFV + YY P
Sbjct: 356 PTLGKNIAMGYVKSGFHKKGTSVLVQVRNKTRKATITPMPFVPTKYYRSP 405
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E +GL+A+QGP + ++LQ+ T DL+ L+F S IAG+ C + R GYTGEDG EIS+
Sbjct: 179 ENQGLVALQGPEAPSVLQKLTPYDLTQLHFGKSTYADIAGVRCHVARGGYTGEDGFEISI 238
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E I E LL V++ GLGARDSL
Sbjct: 239 PKEHTVSITETLLQGP-VQMTGLGARDSL 266
>gi|71003822|ref|XP_756577.1| hypothetical protein UM00430.1 [Ustilago maydis 521]
gi|46096108|gb|EAK81341.1| hypothetical protein UM00430.1 [Ustilago maydis 521]
Length = 454
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 151/250 (60%), Gaps = 14/250 (5%)
Query: 191 SSPS-----AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDV 245
SSPS A +T LYD H+ +GGKMVPF G+ MP+ YG V ASH H R+ +FDV
Sbjct: 71 SSPSTPLTDALSKTGLYDFHVKNGGKMVPFGGYLMPLTYGDVGQVASHHHVRTHAGLFDV 130
Query: 246 SHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLF 305
HM+Q G ++L+ + A + + TLS+ +EQGGI DDLI+TK +DS +
Sbjct: 131 GHMVQHKFKGPGALKFLQHLTPASLTSMPAFSSTLSVLMSEQGGILDDLIITKHADDSFY 190
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DL 364
+V+NA R D+ D +K G + + + ++ GL+A+QGP ++ +L++ D
Sbjct: 191 VVTNAGCRTEDLAWFKKQLDAWK--GDAVKHEVM--DDWGLLALQGPTAAKVLEKLVGDF 246
Query: 365 DLSSLYFMTS--RPCTIAG--IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVK 420
DL++L F S P IAG + C + RAGYTGEDG EIS+P + EALLSD +V+
Sbjct: 247 DLNTLTFGKSVFVPLKIAGDKVECHVARAGYTGEDGFEISIPPASTVKVAEALLSDSEVQ 306
Query: 421 LAGLGARDSL 430
LAGL ARDSL
Sbjct: 307 LAGLAARDSL 316
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 60/108 (55%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GK RR F GA + ++K G R+R G G R G +F + VG +TSG P
Sbjct: 345 GKDRRAAADFLGAERVLKELKEGPPRRRIGLFIDGGIAREGANLFTPEGKVVGRVTSGIP 404
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L KNIAM +E K G +L V +R K D +V KMPFV+S ++
Sbjct: 405 SPTLGKNIAMALVENGQHKKGTKLKVEIRKKLRDAEVAKMPFVESKFF 452
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 5/94 (5%)
Query: 467 EERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSR--PCTIAG--IPCTLTRAGYTGEDG 521
++ GL+A+QGP ++ +L++ D DL++L F S P IAG + C + RAGYTGEDG
Sbjct: 223 DDWGLLALQGPTAAKVLEKLVGDFDLNTLTFGKSVFVPLKIAGDKVECHVARAGYTGEDG 282
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EIS+P + EALLSD +V+LAGL ARDSL
Sbjct: 283 FEISIPPASTVKVAEALLSDSEVQLAGLAARDSL 316
>gi|374621320|ref|ZP_09693854.1| glycine cleavage system T protein (aminomethyltransferase) [gamma
proteobacterium HIMB55]
gi|374304547|gb|EHQ58731.1| glycine cleavage system T protein (aminomethyltransferase) [gamma
proteobacterium HIMB55]
Length = 369
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 144/238 (60%), Gaps = 11/238 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL +LH G KMVPFAG++MP+ Y I A H HTRSK +FDVSHM Q +VTG
Sbjct: 5 TPLTNLHRGLGAKMVPFAGYTMPISY-PDGIIAEHHHTRSKAGLFDVSHMGQVMVTGPEL 63
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE + AD+ +L K T +L TN++GG++DDLIVTK E+ FLV NA+ + D+
Sbjct: 64 ARSLEQVMPADLTQLVHMKSTYALLTNDEGGVRDDLIVTKLDEERFFLVLNAANKHGDLA 123
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A K F +++ L+A+QGP + +L R D+ SL FM++R CT
Sbjct: 124 YLRATLPELK---------FELMDDKALLALQGPDAREVLARFAG-DIDSLGFMSARHCT 173
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITL 436
+ I C +T +GYTGEDG EIS G + + + E LL + +V GLGARDSL ++ L
Sbjct: 174 LEDIDCLVTCSGYTGEDGFEISADGARASRLAELLLQEAEVAPIGLGARDSLRLEVGL 231
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 434 ITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSS 493
+ LN HG L L+F +++ L+A+QGP + +L R D+ S
Sbjct: 111 LVLNAANKHGDLAYLRATLP------ELKFELMDDKALLALQGPDAREVLARFAG-DIDS 163
Query: 494 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 553
L FM++R CT+ I C +T +GYTGEDG EIS G + + + E LL + +V GLGARD
Sbjct: 164 LGFMSARHCTLEDIDCLVTCSGYTGEDGFEISADGARASRLAELLLQEAEVAPIGLGARD 223
Query: 554 SL 555
SL
Sbjct: 224 SL 225
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 9 IFPGKRR--RETGGFPGASIIQSQIKSGVSRKRTGFTSTGV-PIRPGYEIFNANDQRVGA 65
I P +R GG+PGA I+ Q++ G R R G G P+R G + N VG
Sbjct: 253 IAPSRREGGERAGGYPGADILDQQMRDGTQRVRVGLKVLGRRPVRAGQVLLNQEGVEVGI 312
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
I S S+ IAM Y+ P+ S G L +R K V+++V +P YY
Sbjct: 313 ICSDAFGASVGGPIAMAYVRPSASVKGSVLKADLRGKFVELEVVALPMTAQRYY 366
>gi|350296785|gb|EGZ77762.1| glycine cleavage system T protein [Neurospora tetrasperma FGSC
2509]
Length = 477
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 147/249 (59%), Gaps = 15/249 (6%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A Q+TPLYDLHL+HG +MVPF GF MPVQY +S++ASH TR S+FDVSHM+Q + +
Sbjct: 83 ALQKTPLYDLHLAHGAQMVPFGGFHMPVQYKGLSVSASHAFTREHASIFDVSHMVQRIFS 142
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLF--TNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
G E+LE + +D+ L + TLS+ + GGI DD I+TK ED ++V+NA
Sbjct: 143 GSGAREFLERVTPSDLASLGVHRSTLSVLLKADGSGGIVDDTILTKLAEDKFYVVTNAGC 202
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD--LDLSSLY 370
R+ D + + K+ G +++ + L + GL+A+QGP + +L D DL LY
Sbjct: 203 REKDNEYFDQELAKAKASGLEVNQEQL--DGWGLVALQGPEAEAVLADALDGNTDLKQLY 260
Query: 371 FMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKL 421
F S + P ++R GYTGEDG EIS+P + + E LL E V+L
Sbjct: 261 FGQSVYGKVRLDGGKTSAPLLISRGGYTGEDGFEISIPPSETVEVTEKLLHVGGAEKVQL 320
Query: 422 AGLGARDSL 430
AGLGARDSL
Sbjct: 321 AGLGARDSL 329
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 69/119 (57%), Gaps = 8/119 (6%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNAND-- 60
I P RR+ G+ GA I SQ+ +GV R+R GF TG P R G EI D
Sbjct: 356 IIPPNRRKADAGYYGAETINSQLTPKSKGGNGVVRRRVGFIVTGAPAREGAEIVAKGDPT 415
Query: 61 QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++G ITSGCPSPSL KNIAMGYI+ K G E+ V VR K VTKMPFV S YY
Sbjct: 416 TKLGRITSGCPSPSLGKNIAMGYIKDGQHKSGTEVEVLVRGKARPAVVTKMPFVPSKYY 474
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 470 GLIAVQGPLSSTILQRHTD--LDLSSLYFMTSRPCTI------AGIPCTLTRAGYTGEDG 521
GL+A+QGP + +L D DL LYF S + P ++R GYTGEDG
Sbjct: 233 GLVALQGPEAEAVLADALDGNTDLKQLYFGQSVYGKVRLDGGKTSAPLLISRGGYTGEDG 292
Query: 522 VEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
EIS+P + + E LL E V+LAGLGARDSL
Sbjct: 293 FEISIPPSETVEVTEKLLHVGGAEKVQLAGLGARDSL 329
>gi|406862899|gb|EKD15948.1| glycine cleavage system t protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 465
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 179/317 (56%), Gaps = 35/317 (11%)
Query: 191 SSPSAE--QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHM 248
S+PS E Q+TPLYDLHL+HGG MV F GF MPVQY ++S++ASH TRS S+FDVSHM
Sbjct: 63 SAPSNEVLQKTPLYDLHLAHGGNMVGFGGFHMPVQYASLSVSASHHFTRSHASLFDVSHM 122
Query: 249 LQTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFLV 307
+Q TG +LE I A + L+ + TLS L GGI DD I+T+ + ++V
Sbjct: 123 VQHRFTGPGVNAFLERITPAGIAGLEIHQSTLSTLLWPVTGGIVDDTILTRLGPELFYVV 182
Query: 308 SNASRRKVDMDLMVAAQDRF-KSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR----HT 362
+NA R+ D+ + D F K G + + L E+ GL+A+QGPLS+ IL R
Sbjct: 183 TNAGCREKDLKYLQEQLDAFIKEGGASVEWEVL--EKWGLVALQGPLSADILGRVMVEPA 240
Query: 363 DLDLSSLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD 416
+ +L +YF +S+ I P ++RAGYTGEDG EIS+P + + E LL
Sbjct: 241 ESELKGMYFGSSKFIKIKLHNGETSSPLLVSRAGYTGEDGFEISIPESEAVVVTETLLQS 300
Query: 417 ---EDVKLAGLGARDSLSGDITL----------NTPVPHGSLK--LSNDRFKS---LGKD 458
E ++LAGLGARDSL + + TPV G+L + DR S G D
Sbjct: 301 AGPEQLQLAGLGARDSLRLEAGMCLYGHDLDDSTTPV-EGALGWIIGKDRKTSGGFHGSD 359
Query: 459 IHLQFLSPEERGLIAVQ 475
+ L+ L+P+ +G V+
Sbjct: 360 VILKQLTPKSKGGSGVE 376
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 6/114 (5%)
Query: 12 GKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGA 65
GK R+ +GGF G+ +I Q+ SGV R+R G G P R G +I N +++G
Sbjct: 346 GKDRKTSGGFHGSDVILKQLTPKSKGGSGVERRRIGLIVEGAPAREGADIVNDKGEKIGN 405
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
ITSGCPSP+L KN+AMGYI+ + K G ++ V VR K KVTKMPFV S Y+
Sbjct: 406 ITSGCPSPTLGKNVAMGYIKDGFHKSGTDVGVVVRGKNRKAKVTKMPFVPSKYW 459
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 15/117 (12%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR----HTDLDLSSLYFMTSRPCTI--- 504
K G + + L E+ GL+A+QGPLS+ IL R + +L +YF +S+ I
Sbjct: 203 IKEGGASVEWEVL--EKWGLVALQGPLSADILGRVMVEPAESELKGMYFGSSKFIKIKLH 260
Query: 505 ---AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
P ++RAGYTGEDG EIS+P + + E LL E ++LAGLGARDSL
Sbjct: 261 NGETSSPLLVSRAGYTGEDGFEISIPESEAVVVTETLLQSAGPEQLQLAGLGARDSL 317
>gi|328544996|ref|YP_004305105.1| glycine cleavage system protein T [Polymorphum gilvum SL003B-26A1]
gi|326414738|gb|ADZ71801.1| Aminomethyltransferase [Polymorphum gilvum SL003B-26A1]
Length = 379
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 149/245 (60%), Gaps = 18/245 (7%)
Query: 194 SAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTV 252
SAE +TPL+DLH+ G +MVPFAG++MPVQY A I A HLHTR K +FDVSHM Q
Sbjct: 7 SAELMQTPLHDLHVELGARMVPFAGYAMPVQYPA-GILAEHLHTRGKAGLFDVSHMGQAW 65
Query: 253 VTGKHRE---EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS----LF 305
+ G E LE+ ++V EL G+ ++ N +GGI DDL+VT+ + + LF
Sbjct: 66 LVGPDHETTARALEAFVPSNVVELGRGRQRYTVLLNAEGGIVDDLMVTRPVAEDDDGRLF 125
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD 365
LV NASR+ VD L+ A L + L+ + E+R LIAVQGP + D
Sbjct: 126 LVVNASRKDVDYALLRA------GLPDAVRLEVI--EDRALIAVQGP-KAVAAVAAHAPD 176
Query: 366 LSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
+ L FMT+ P GI C ++R+GYTGEDGVE+SVP IV ALL+DE V+ GLG
Sbjct: 177 AARLAFMTAAPMEFDGIACHVSRSGYTGEDGVEMSVPAGAAEAIVRALLADERVRPVGLG 236
Query: 426 ARDSL 430
ARDSL
Sbjct: 237 ARDSL 241
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R LIAVQGP + D + L FMT+ P GI C ++R+GYTGEDGVE+SV
Sbjct: 154 EDRALIAVQGP-KAVAAVAAHAPDAARLAFMTAAPMEFDGIACHVSRSGYTGEDGVEMSV 212
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P IV ALL+DE V+ GLGARDSL
Sbjct: 213 PAGAAEAIVRALLADERVRPVGLGARDSL 241
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR GGFPG+ I ++ G RKR G G P R G EI VG +TSG
Sbjct: 271 KRRRVEGGFPGSGRILGELAGGTGRKRVGLRLDGRAPAREGAEIRLPGGPIVGVVTSGGF 330
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+PSL +AMGY+ ++ G EL + VR K + V MPFV Y+
Sbjct: 331 APSLGAPVAMGYVAAGHAVPGTELALVVRGKELPATVVAMPFVPHRYH 378
>gi|148546266|ref|YP_001266368.1| glycine cleavage system T protein [Pseudomonas putida F1]
gi|148510324|gb|ABQ77184.1| glycine cleavage system T protein [Pseudomonas putida F1]
Length = 373
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 146/233 (62%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q V+ G
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIVLRGAD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V ED+LFLV NA+ ++ D+
Sbjct: 66 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGEDTLFLVVNAACKEQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + +G +Q L EER L+A+QGP + +L+R +++ + FM R
Sbjct: 126 AHLQS------HIGNRCEVQPLF-EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+ C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 178 TLLGVDCFVSRSGYTGEDGYEISVPVNAADALARRLLAEPEVQPIGLGARDSL 230
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETGG----FPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G FPGA I + ++ GV+RKR G P+R G +I +
Sbjct: 250 IEASLLWAISKVRRAEGARAASFPGAETIFAHVRDGVARKRVGLLPQERTPVREGADIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYI+ ++ + L+ VR K+V +KV+KMPFV
Sbjct: 310 ANDKPVGKVCSGGFGPTLAAPVAMGYIDSEHAALDTALFAVVRGKKVALKVSKMPFVTPR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R +++ + FM R T+ G+ C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRVTLLGVDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V+ GLGARDSL
Sbjct: 202 PVNAADALARRLLAEPEVQPIGLGARDSL 230
>gi|421524358|ref|ZP_15970981.1| glycine cleavage system T protein [Pseudomonas putida LS46]
gi|402751787|gb|EJX12298.1| glycine cleavage system T protein [Pseudomonas putida LS46]
Length = 373
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 146/233 (62%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q V+ G
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIVLRGAD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V ED+LFLV NA+ ++ D+
Sbjct: 66 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGEDTLFLVVNAACKEQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + +G +Q L EER L+A+QGP + +L+R +++ + FM R
Sbjct: 126 AHLQS------HIGNRCEVQPLF-EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+ C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 178 TLLGVDCFVSRSGYTGEDGYEISVPVNAADALARRLLAEPEVQPIGLGARDSL 230
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G GFPGA I + ++ GV+RKR G P+R G +I +
Sbjct: 250 IEASLLWAISKVRRAEGARAAGFPGAETIFAHVRDGVARKRVGLLPQERTPVREGADIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYI+ ++ + EL+ VR K+V +KV+KMPFV
Sbjct: 310 ANDKAVGKVCSGGFGPTLAAPVAMGYIDSEHAALDTELFAVVRGKKVALKVSKMPFVTPR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R +++ + FM R T+ G+ C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRVTLLGVDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V+ GLGARDSL
Sbjct: 202 PVNAADALARRLLAEPEVQPIGLGARDSL 230
>gi|357480343|ref|XP_003610457.1| Aminomethyltransferase [Medicago truncatula]
gi|355511512|gb|AES92654.1| Aminomethyltransferase [Medicago truncatula]
Length = 357
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 137/221 (61%), Gaps = 5/221 (2%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPFAG+SMP+QY SI S L+ R S+FDV+HM + GK +LE + +ADV
Sbjct: 1 MVPFAGWSMPIQY-KDSIMDSTLNCRQNGSLFDVAHMCGLSLKGKDAVSFLEKLVIADVA 59
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG 331
L PG GTL++FTNE+GG DD ++TK + ++LV NA R D+ + FK+ G
Sbjct: 60 ALAPGTGTLTVFTNEKGGAIDDSVITKVTDHHIYLVVNAGCRDKDLAHIEEHMKAFKAKG 119
Query: 332 KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 391
D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C LTR GY
Sbjct: 120 GDVSWHI--HDERTLLALQGPLAAPVLQHLTKDDLSKLYFGEFRVLDINGSQCFLTRTGY 177
Query: 392 TGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
TGEDG EISVP E + +A+L S+ ++L GLGARDSL
Sbjct: 178 TGEDGFEISVPSEHGVDLAKAILEKSEGKIRLTGLGARDSL 218
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+ G S +R GF S+G P R EI + +G +TSG
Sbjct: 247 GKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPARSHSEIQDEGGNNIGEVTSGGF 306
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G ++ + +R K + VTKMPFV + YY P
Sbjct: 307 SPCLKKNIAMGYVKSGLHKAGTKVKIIIRGKANEGVVTKMPFVPTKYYKP 356
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 115 FKAKGGDVSWHI--HDERTLLALQGPLAAPVLQHLTKDDLSKLYFGEFRVLDINGSQCFL 172
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ ++L GLGARDSL
Sbjct: 173 TRTGYTGEDGFEISVPSEHGVDLAKAILEKSEGKIRLTGLGARDSL 218
>gi|397694721|ref|YP_006532602.1| glycine cleavage system T protein [Pseudomonas putida DOT-T1E]
gi|397331451|gb|AFO47810.1| glycine cleavage system T protein [Pseudomonas putida DOT-T1E]
Length = 373
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 146/233 (62%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q V+ G
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIVLHGAD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V ED+LFLV NA+ ++ D+
Sbjct: 66 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGEDTLFLVVNAACKEQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + +G +Q L EER L+A+QGP + +L+R +++ + FM R
Sbjct: 126 AHLQS------HIGNRCEVQPLF-EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+ C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 178 TLLGVDCFVSRSGYTGEDGYEISVPVNAADALARRLLAEPEVQPIGLGARDSL 230
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G GFPGA I + ++ GV+RKR G P+R G +I +
Sbjct: 250 IEASLLWAISKVRRAEGARAAGFPGAETIFAHVRDGVARKRVGLLPQERTPVREGADIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYI+ ++ + EL+ VR K+V +KV+KMPFV
Sbjct: 310 ANDKAVGKVCSGGFGPTLAAPVAMGYIDSEHAALDTELFAVVRGKKVALKVSKMPFVTPR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R +++ + FM R T+ G+ C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRVTLLGVDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V+ GLGARDSL
Sbjct: 202 PVNAADALARRLLAEPEVQPIGLGARDSL 230
>gi|300121816|emb|CBK22390.2| unnamed protein product [Blastocystis hominis]
Length = 452
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 144/234 (61%), Gaps = 7/234 (2%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSK--VSVFDVSHMLQTVVTGK 256
TPL+DLH GK+V FAG+++PVQY V H+ R K +FDVSHM Q TGK
Sbjct: 88 TPLFDLHNELKGKIVEFAGYALPVQYSGV--LPEHMAVRGKNTCGLFDVSHMGQIKWTGK 145
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R E+LE + V+D+H L P +G L+L E GGI DD ++T D + V N + + D
Sbjct: 146 DRVEFLERVLVSDIHSLQPTQGRLTLLCQEDGGIIDDTVITNA-GDYHYEVVNGACKYGD 204
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M+ +F++ GK++ +++L + GLIA+QG ++ +L+R T+ D++ + FMT +
Sbjct: 205 MEHFKKEMAKFQAEGKEVQMEYLG--DIGLIALQGAMAPAVLRRFTEFDVTKMPFMTGQD 262
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDG E+ +P +V+ +L +++V GLGARDSL
Sbjct: 263 IKVGGVNCRVTRCGYTGEDGYEVQIPAADSIPLVKEILKEKEVLPCGLGARDSL 316
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
K+RR GGF G I ++K+ +KR GF G P R G +I+ +N + VG ITSG S
Sbjct: 346 KQRRADGGFIGHKAIMERMKT-CEKKRVGFMVQGAPARHGAKIY-SNGELVGEITSGTLS 403
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSLKK +AMGYI+ G ++ V VR+K+ VTKMPFV +NYY
Sbjct: 404 PSLKKPVAMGYIKKGLHTAGTQVEVEVRNKKYPAVVTKMPFVPNNYY 450
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
+F++ GK++ +++L + GLIA+QG ++ +L+R T+ D++ + FMT + + G+ C
Sbjct: 214 KFQAEGKEVQMEYLG--DIGLIALQGAMAPAVLRRFTEFDVTKMPFMTGQDIKVGGVNCR 271
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDG E+ +P +V+ +L +++V GLGARDSL
Sbjct: 272 VTRCGYTGEDGYEVQIPAADSIPLVKEILKEKEVLPCGLGARDSL 316
>gi|59713883|ref|YP_206658.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Vibrio fischeri
ES114]
gi|59482131|gb|AAW87770.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Vibrio fischeri
ES114]
Length = 372
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 148/234 (63%), Gaps = 11/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+T LY++H++ G KMVPFAG+ MPVQY + + HLHTR+ +FDVSHM Q + GK
Sbjct: 6 HKTALYEIHVAAGAKMVPFAGYEMPVQY-PLGVKKEHLHTRNAAGLFDVSHMGQLRLKGK 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ LE++ D+ +L K + FTN+ GGI DDL+V D LF+V NA+ ++ D
Sbjct: 65 NAAAALEALVPVDIIDLPSQKQRYAFFTNDNGGIMDDLMVA-NFGDHLFVVVNAACKEQD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ +VA +L D+ ++ + E+R L+A+QGP ++ +L R +S++ FM +
Sbjct: 124 IAHLVA------NLPSDVEIEVI--EDRALLALQGPQAADVLSR-LQPSVSNMLFMDTAV 174
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I+GI C ++R+GYTGEDG EISVP ++ + E L S E+V+ GLGARDSL
Sbjct: 175 VEISGIECYVSRSGYTGEDGYEISVPNDKAAELAETLTSFEEVEWIGLGARDSL 228
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIF 56
+ + LL K RR G GFPGA +I QI++ V+RKR G T P+R G +++
Sbjct: 248 VEASLLWAISKNRRADGERVAGFPGADVILKQIETKDVNRKRVGLVGQTKAPVREGCKLY 307
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+A+D +G +TSG P+ K ++M Y+ + +G E++ VR K++ + V KMPFV
Sbjct: 308 DADDNEIGIVTSGTAGPTAGKPVSMAYVRTDLASLGTEVFADVRGKKLPMTVEKMPFVPQ 367
Query: 117 NYY 119
YY
Sbjct: 368 RYY 370
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L D+ ++ + E+R L+A+QGP ++ +L R +S++ FM + I+GI C ++R
Sbjct: 130 NLPSDVEIEVI--EDRALLALQGPQAADVLSR-LQPSVSNMLFMDTAVVEISGIECYVSR 186
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP ++ + E L S E+V+ GLGARDSL
Sbjct: 187 SGYTGEDGYEISVPNDKAAELAETLTSFEEVEWIGLGARDSL 228
>gi|28900660|ref|NP_800315.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus RIMD
2210633]
gi|260365535|ref|ZP_05778072.1| aminomethyltransferase [Vibrio parahaemolyticus K5030]
gi|260877598|ref|ZP_05889953.1| aminomethyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260895389|ref|ZP_05903885.1| aminomethyltransferase [Vibrio parahaemolyticus Peru-466]
gi|260901661|ref|ZP_05910056.1| aminomethyltransferase [Vibrio parahaemolyticus AQ4037]
gi|433659922|ref|YP_007300781.1| Aminomethyltransferase (glycine cleavage system T protein) [Vibrio
parahaemolyticus BB22OP]
gi|28809040|dbj|BAC62148.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus RIMD
2210633]
gi|308085271|gb|EFO34966.1| aminomethyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308090733|gb|EFO40428.1| aminomethyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308108852|gb|EFO46392.1| aminomethyltransferase [Vibrio parahaemolyticus AQ4037]
gi|308114318|gb|EFO51858.1| aminomethyltransferase [Vibrio parahaemolyticus K5030]
gi|432511309|gb|AGB12126.1| Aminomethyltransferase (glycine cleavage system T protein) [Vibrio
parahaemolyticus BB22OP]
Length = 372
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 146/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G+
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGEG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L+ GK + FTNE+GGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L+ + E+R L+A+QGP ++T+L R +++ + FM R
Sbjct: 125 AHLKA------HLPSGVELEVI--EDRALLAIQGPQAATVLARFAP-EVADMLFMDIRKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L ++E+V+ GLGARDSL
Sbjct: 176 EILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSL 228
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 268 GGFPGADIILKQIETKDVARKRVGLVGQTKAPVREGVELFDADGAKIGIVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 328 KPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++T+L R +++ + FM R I G C ++R+GYTGEDG EISV
Sbjct: 141 EDRALLAIQGPQAATVLARFAP-EVADMLFMDIRKVEILGAECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L ++E+V+ GLGARDSL
Sbjct: 200 PADKAEELARKLTAEEEVEWIGLGARDSL 228
>gi|254569542|ref|XP_002491881.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031678|emb|CAY69601.1| hypothetical protein PAS_chr2-2_0492 [Komagataella pastoris GS115]
Length = 392
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 138/237 (58%), Gaps = 11/237 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLY LH+ HG +VP+AGF+MPV Y S SH TRSKV +FDVSHMLQ V G
Sbjct: 18 KTPLYSLHVEHGATLVPYAGFAMPVLYKGQSHIESHNWTRSKVGIFDVSHMLQHRVKGNS 77
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E+L+ I +D+ L+P TLS+ N+QGG+ DD I+TK E+ ++V+NA R D
Sbjct: 78 AAEFLQKITPSDLKALEPFTSTLSVLLNDQGGVIDDCIITKHDENEFYIVTNAGCRDKDT 137
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ ++ G H F E L+A+QGP ++ LQ+ T LDL+ LYF S
Sbjct: 138 AFI---KEEISQFGNASHENF----EGTLLAIQGPQAAETLQKFTKLDLTKLYFGNSAFA 190
Query: 378 TIAGI---PCTLTRAGYTGEDGVEISVP-GEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G + R+GYTGEDG E+S+P + +ALL E +K GL ARDSL
Sbjct: 191 KLEGFTNDAIHIARSGYTGEDGFELSIPVDHEGLEFTKALLELEQIKPIGLAARDSL 247
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKS--GVSRKRTGFTSTGVPIRPGYEIFNAN--DQRV 63
LI +R ET GF G+ I SQI++ VS KR G S G R G +I++ D+++
Sbjct: 274 LIAKSRRTPETAGFNGSDRILSQIQNPKSVSFKRVGIQSKGPSPREGNKIYSYEEPDKQI 333
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
G + SG PSP+L N+ +I + K G ++ + +R+K+ + V K+PFV +Y P
Sbjct: 334 GVVCSGSPSPTLGGNVGQAFIHKPHQKSGTKILIEIRNKKREAHVAKLPFVAPKFYKP 391
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI-- 507
+ G H F E L+A+QGP ++ LQ+ T LDL+ LYF S + G
Sbjct: 142 EEISQFGNASHENF----EGTLLAIQGPQAAETLQKFTKLDLTKLYFGNSAFAKLEGFTN 197
Query: 508 -PCTLTRAGYTGEDGVEISVP-GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R+GYTGEDG E+S+P + +ALL E +K GL ARDSL
Sbjct: 198 DAIHIARSGYTGEDGFELSIPVDHEGLEFTKALLELEQIKPIGLAARDSL 247
>gi|300124013|emb|CBK25284.2| Aminomethyltransferase [Blastocystis hominis]
Length = 390
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 144/234 (61%), Gaps = 7/234 (2%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSK--VSVFDVSHMLQTVVTGK 256
TPL+DLH GK+V FAG+++PVQY V H+ R K +FDVSHM Q TGK
Sbjct: 26 TPLFDLHNELKGKIVEFAGYALPVQYSGV--LPEHMAVRGKNTCGLFDVSHMGQIKWTGK 83
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R E+LE + V+D+H L P +G L+L E GGI DD ++T D + V N + + D
Sbjct: 84 DRVEFLERVLVSDIHSLQPTQGRLTLLCQEDGGIIDDTVITNA-GDYHYEVVNGACKYGD 142
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M+ +F++ GK++ +++L + GLIA+QG ++ +L+R T+ D++ + FMT +
Sbjct: 143 MEHFKKEMAKFQAEGKEVQMEYLG--DIGLIALQGAMAPAVLRRFTEFDVTKMPFMTGQD 200
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDG E+ +P +V+ +L +++V GLGARDSL
Sbjct: 201 IKVGGVNCRVTRCGYTGEDGYEVQIPAADSIPLVKEILKEKEVLPCGLGARDSL 254
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
K+RR GGF G I ++K+ +KR GF G P R G +I+ +N + VG ITSG S
Sbjct: 284 KQRRADGGFIGHKAIMERMKT-CEKKRVGFMVQGAPARHGAKIY-SNGELVGEITSGTLS 341
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSLKK +AMGYI+ G ++ V VR+K+ VTKMPFV +NYY
Sbjct: 342 PSLKKPVAMGYIKKGLHTAGTQVEVEVRNKKYPAVVTKMPFVPNNYY 388
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
+F++ GK++ +++L + GLIA+QG ++ +L+R T+ D++ + FMT + + G+ C
Sbjct: 152 KFQAEGKEVQMEYLG--DIGLIALQGAMAPAVLRRFTEFDVTKMPFMTGQDIKVGGVNCR 209
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDG E+ +P +V+ +L +++V GLGARDSL
Sbjct: 210 VTRCGYTGEDGYEVQIPAADSIPLVKEILKEKEVLPCGLGARDSL 254
>gi|328351619|emb|CCA38018.1| aminomethyltransferase [Komagataella pastoris CBS 7435]
Length = 391
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 138/237 (58%), Gaps = 11/237 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLY LH+ HG +VP+AGF+MPV Y S SH TRSKV +FDVSHMLQ V G
Sbjct: 17 KTPLYSLHVEHGATLVPYAGFAMPVLYKGQSHIESHNWTRSKVGIFDVSHMLQHRVKGNS 76
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E+L+ I +D+ L+P TLS+ N+QGG+ DD I+TK E+ ++V+NA R D
Sbjct: 77 AAEFLQKITPSDLKALEPFTSTLSVLLNDQGGVIDDCIITKHDENEFYIVTNAGCRDKDT 136
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ ++ G H F E L+A+QGP ++ LQ+ T LDL+ LYF S
Sbjct: 137 AFI---KEEISQFGNASHENF----EGTLLAIQGPQAAETLQKFTKLDLTKLYFGNSAFA 189
Query: 378 TIAGI---PCTLTRAGYTGEDGVEISVP-GEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G + R+GYTGEDG E+S+P + +ALL E +K GL ARDSL
Sbjct: 190 KLEGFTNDAIHIARSGYTGEDGFELSIPVDHEGLEFTKALLELEQIKPIGLAARDSL 246
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKS--GVSRKRTGFTSTGVPIRPGYEIFNAN--DQRV 63
LI +R ET GF G+ I SQI++ VS KR G S G R G +I++ D+++
Sbjct: 273 LIAKSRRTPETAGFNGSDRILSQIQNPKSVSFKRVGIQSKGPSPREGNKIYSYEEPDKQI 332
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
G + SG PSP+L N+ +I + K G ++ + +R+K+ + V K+PFV +Y P
Sbjct: 333 GVVCSGSPSPTLGGNVGQAFIHKPHQKSGTKILIEIRNKKREAHVAKLPFVAPKFYKP 390
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI-- 507
+ G H F E L+A+QGP ++ LQ+ T LDL+ LYF S + G
Sbjct: 141 EEISQFGNASHENF----EGTLLAIQGPQAAETLQKFTKLDLTKLYFGNSAFAKLEGFTN 196
Query: 508 -PCTLTRAGYTGEDGVEISVP-GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R+GYTGEDG E+S+P + +ALL E +K GL ARDSL
Sbjct: 197 DAIHIARSGYTGEDGFELSIPVDHEGLEFTKALLELEQIKPIGLAARDSL 246
>gi|417322444|ref|ZP_12108978.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus 10329]
gi|328470598|gb|EGF41509.1| glycine cleavage system protein T2 [Vibrio parahaemolyticus 10329]
Length = 372
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 146/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G+
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGEG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L+ GK + FTNE+GGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AATFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L+ + E+R L+A+QGP ++T+L R +++ + FM R
Sbjct: 125 AHLKA------HLPSGVELEVI--EDRALLAIQGPQAATVLARFAP-EVTDMLFMDIRKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L ++E+V+ GLGARDSL
Sbjct: 176 EILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSL 228
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 268 GGFPGADIILKQIETKDVARKRVGLVGQTKAPVREGVELFDADGAKIGIVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 328 KPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++T+L R +++ + FM R I G C ++R+GYTGEDG EISV
Sbjct: 141 EDRALLAIQGPQAATVLARFAP-EVTDMLFMDIRKVEILGAECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L ++E+V+ GLGARDSL
Sbjct: 200 PADKAEELARKLTAEEEVEWIGLGARDSL 228
>gi|336272461|ref|XP_003350987.1| hypothetical protein SMAC_04291 [Sordaria macrospora k-hell]
gi|380090754|emb|CCC04924.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 466
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 147/255 (57%), Gaps = 14/255 (5%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S +S A Q+TPLYDLHL+HG +MVPF GF MPVQY +S++ASH TR S+FDVSH
Sbjct: 66 SSSASSEALQKTPLYDLHLAHGAQMVPFGGFHMPVQYKGLSVSASHAFTREHASIFDVSH 125
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLF--TNEQGGIQDDLIVTKTLEDSLF 305
M+Q + +G E+LE + +D+ L TLS+ + GGI DD IVTK ED +
Sbjct: 126 MVQRIFSGPGACEFLERVTPSDLASLGVHHSTLSVLLKADGSGGIVDDTIVTKLAEDKFY 185
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD-- 363
+V+NA R+ D + + K G ++ + L + GL+A+QGP + +L D
Sbjct: 186 VVTNAGCREKDNEYFDQELAKAKESGLEVSQEQL--DGWGLVALQGPEAEAVLADALDGT 243
Query: 364 LDLSSLYFMTSRPCTI-----AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--- 415
DL LYF S + P ++R GYTGEDG EIS+P + + E LLS
Sbjct: 244 TDLKQLYFGQSVYGKVKLDGKTSAPLLISRGGYTGEDGFEISIPPSETVAVTEKLLSVGG 303
Query: 416 DEDVKLAGLGARDSL 430
E V+ AGLGARDSL
Sbjct: 304 AERVQFAGLGARDSL 318
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNAND-- 60
I P RR+ G+ GA I +Q+ GV+R+R GF TG P R G EI D
Sbjct: 345 IIPPNRRKADAGYYGAETIAAQLTPKSKGGKGVTRRRVGFIVTGAPAREGAEIVAKGDPT 404
Query: 61 QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ G ITSGCPSP+L KNIAMGYI+ K G E+ V VR K VTKMPFV S YY
Sbjct: 405 TKFGRITSGCPSPTLGKNIAMGYIKDGQHKSGTEVEVLVRGKARPAVVTKMPFVPSKYY 463
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 470 GLIAVQGPLSSTILQRHTD--LDLSSLYFMTSRPCTI-----AGIPCTLTRAGYTGEDGV 522
GL+A+QGP + +L D DL LYF S + P ++R GYTGEDG
Sbjct: 223 GLVALQGPEAEAVLADALDGTTDLKQLYFGQSVYGKVKLDGKTSAPLLISRGGYTGEDGF 282
Query: 523 EISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
EIS+P + + E LLS E V+ AGLGARDSL
Sbjct: 283 EISIPPSETVAVTEKLLSVGGAERVQFAGLGARDSL 318
>gi|294955718|ref|XP_002788645.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904186|gb|EER20441.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 394
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 142/236 (60%), Gaps = 8/236 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H++ GGKMV FAG+SMPVQY I S LHTR+ S+FDVSHM Q V GK
Sbjct: 26 KRTALYDFHMAQGGKMVDFAGWSMPVQYKDTGIITSCLHTRADASLFDVSHMGQLRVYGK 85
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R ++ES+ V D+ L PG+G L+L T Q I DD ++ D L++V NAS + D
Sbjct: 86 DRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICNE-GDHLYVVLNASNTEKD 144
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M + A F D+ L+ E LIA+QGP + +LQ DL+ + FM S
Sbjct: 145 MKHIETALADFDG---DVSLE--PHPEASLIALQGPKAMEVLQPMLAEDLTKVPFMVSFA 199
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVP-GEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+P T+TR GYTGEDG E+S+P E I E ++ +E V AGLGARD+L
Sbjct: 200 TTVNGVPNVTVTRCGYTGEDGFELSIPTSEGVNAIAEKMIENEAVLPAGLGARDTL 255
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSG-VSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
KRRR FPG + Q+K G V RKR G TG P R G I + + ++G +TSG
Sbjct: 285 KRRRNEANFPGVEVFLRQVKKGGVDRKRVGLLVTGPPAREGSTILDTDSNKIGEVTSGTF 344
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L + IAMGY++ A+SK + VR+K + +TKMPFV++NYY
Sbjct: 345 SPTLGRPIAMGYVQTAFSKSDTVVQTEVRNKINEAIITKMPFVEANYY 392
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISV 526
E LIA+QGP + +LQ DL+ + FM S T+ G+P T+TR GYTGEDG E+S+
Sbjct: 166 EASLIALQGPKAMEVLQPMLAEDLTKVPFMVSFATTVNGVPNVTVTRCGYTGEDGFELSI 225
Query: 527 P-GEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E I E ++ +E V AGLGARD+L
Sbjct: 226 PTSEGVNAIAEKMIENEAVLPAGLGARDTL 255
>gi|209884574|ref|YP_002288431.1| glycine cleavage system aminomethyltransferase T [Oligotropha
carboxidovorans OM5]
gi|337741757|ref|YP_004633485.1| aminomethyltransferase GcvT [Oligotropha carboxidovorans OM5]
gi|386030773|ref|YP_005951548.1| aminomethyltransferase GcvT [Oligotropha carboxidovorans OM4]
gi|209872770|gb|ACI92566.1| glycine cleavage system T protein [Oligotropha carboxidovorans OM5]
gi|336095841|gb|AEI03667.1| aminomethyltransferase GcvT [Oligotropha carboxidovorans OM4]
gi|336099421|gb|AEI07244.1| aminomethyltransferase GcvT [Oligotropha carboxidovorans OM5]
Length = 382
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 148/247 (59%), Gaps = 24/247 (9%)
Query: 193 PSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTV 252
PS+ ++ PL+ LH+S GGKMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q +
Sbjct: 7 PSSLKQVPLHALHVSRGGKMVPFAGYEMPVQY-AAGVLKEHLHTRASAGLFDVSHMGQIM 65
Query: 253 VTGKH-REE----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
+ K R E LE + D+ + PG+ +LFTNE GGI DDL+V D+LFLV
Sbjct: 66 LRPKSGRVEDAAAALERLVPQDILGIAPGRQRYALFTNEDGGILDDLMVAN-FGDALFLV 124
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHL----QFLSAEERGLIAVQGPLSSTILQRHTD 363
NA+ + D + A HL + + +R LIA+QGP + +L++ D
Sbjct: 125 VNAACKDADEAHLRA------------HLSSTCEIVPLTDRALIALQGPKAVAVLEK-LD 171
Query: 364 LDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAG 423
+S++ FM S P T+ GIPC ++R+GYTGEDG EISVP +V LL+D V G
Sbjct: 172 PTISAMRFMDSGPRTLLGIPCFVSRSGYTGEDGFEISVPAADAERLVTTLLADPAVLPIG 231
Query: 424 LGARDSL 430
LGARDSL
Sbjct: 232 LGARDSL 238
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L++ D +S++ FM S P T+ GIPC ++R+GYTGEDG EISVP
Sbjct: 152 DRALIALQGPKAVAVLEK-LDPTISAMRFMDSGPRTLLGIPCFVSRSGYTGEDGFEISVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+V LL+D V GLGARDSL
Sbjct: 211 AADAERLVTTLLADPAVLPIGLGARDSL 238
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPSL 75
GGFPGA I Q+ G R+R G + G P+R +F ++ R+G +TSG PS+
Sbjct: 278 GGFPGADTILRQLAEGAPRRRVGLKAEGRAPVREDAPLFADASSTNRLGRVTSGGFGPSV 337
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ + G L +R R+ ++V K+PFV Y
Sbjct: 338 NGPVAMGYVPTPLASAGTALVTELRGSRLPMQVVKLPFVAPTY 380
>gi|393214158|gb|EJC99651.1| aminomethyltransferase [Fomitiporia mediterranea MF3/22]
Length = 417
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 143/239 (59%), Gaps = 8/239 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+ +G KMVPFAG+SMP+ YG+V +SH H R+ V +FDV HM+Q+ G
Sbjct: 40 RKTNLYDFHVENGAKMVPFAGYSMPLSYGSVGTVSSHHHVRNSVGLFDVGHMVQSNFLGG 99
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+LE + + + L P TLS+ NEQGGI DD I+TK D+ ++V+NA RR+ D
Sbjct: 100 SATEFLEHLTPSSLSILTPYSSTLSVLLNEQGGIIDDTIITKHAPDAFYVVTNAGRRQRD 159
Query: 317 MDLMVAAQDRFK--SLGKD---IHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + S+ K+ + L+ L E GL+A+QGP ++ +LQ T DL L F
Sbjct: 160 LTWFRQKLDEWNSSSIAKEKGKVELEVL--ENWGLLALQGPEAAGLLQGLTAYDLRGLTF 217
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G + R GYTGEDG EIS+P Q + + LL V+L GLGARDSL
Sbjct: 218 GRSAFVPLEGFNVHVARGGYTGEDGFEISIPPSQTLELTKLLLRP-PVQLTGLGARDSL 275
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAN-DQRVGAITSGC 70
GK RRE GGF GA +++ +K G R+R G T G P R G I + R+G +TSG
Sbjct: 304 GKERREKGGFVGADVVKRHLKDGPPRRRVGLTVEGAPAREGAPIHTPDGSSRLGIVTSGI 363
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSPSL KNIAMGY+ + K G EL V VR K VT MPFV++ YY
Sbjct: 364 PSPSLGKNIAMGYVTSGHHKKGTELAVEVRGKLRRAVVTPMPFVQTRYY 412
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E GL+A+QGP ++ +LQ T DL L F S + G + R GYTGEDG EIS+
Sbjct: 188 ENWGLLALQGPEAAGLLQGLTAYDLRGLTFGRSAFVPLEGFNVHVARGGYTGEDGFEISI 247
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P Q + + LL V+L GLGARDSL
Sbjct: 248 PPSQTLELTKLLLRP-PVQLTGLGARDSL 275
>gi|296816585|ref|XP_002848629.1| aminomethyltransferase [Arthroderma otae CBS 113480]
gi|238839082|gb|EEQ28744.1| aminomethyltransferase [Arthroderma otae CBS 113480]
Length = 483
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 154/273 (56%), Gaps = 22/273 (8%)
Query: 180 FSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSK 239
SGL + S ++ S ++T YD H+ H GKMVPFAG+SMP+QYG +S SH TR K
Sbjct: 62 LSGLRYASSSSTAESDIKKTQFYDFHIEHKGKMVPFAGYSMPLQYGDLSHVESHKWTREK 121
Query: 240 VSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTK 298
S+FDVSHM+Q + G + L I A + L TLS +E GGI DD +VT+
Sbjct: 122 SSLFDVSHMVQHHIIGPGARDLLMKITPASLDSLKDNHSTLSCLLDESTGGIVDDTVVTR 181
Query: 299 TLEDSLFLVSNASRRKVDMDLMVAAQDRFKSL----GKDIHLQFLSAEERGLIAVQGPLS 354
+S + V+NA RRK D++ + + F++ +D + + + R LIA+QGP S
Sbjct: 182 LGPESFYFVTNAGRRKEDLEFLTKEIEAFRNTQDPSKRDSIISWSILDSRALIALQGPAS 241
Query: 355 STILQR------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISV 401
+ LQ + DLS+LYF R + + P L +R GYTGEDG EIS+
Sbjct: 242 ANALQSLIKKETSAETDLSTLYFGQCRQLHLTFPDGSSTPSRLLISRTGYTGEDGFEISI 301
Query: 402 PGEQCTH----IVEALLSDEDVKLAGLGARDSL 430
P EQ + + E L+S+ DVKLAGL ARDSL
Sbjct: 302 PTEQDANLPRRVAELLISNPDVKLAGLAARDSL 334
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 11/119 (9%)
Query: 12 GKRRRETGG----FPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQR- 62
GK RR+ F GAS I Q+ S ++R+R GFT G P R G I + D +
Sbjct: 363 GKDRRDPSSPLSKFNGASTILPQLASPAKTLTRRRVGFTVEDGAPAREGAVIVDLADGKT 422
Query: 63 -VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSG PSP+L KNIAMGYI+ K G E+ + VR K VT MP+++S +Y
Sbjct: 423 EVGVVTSGLPSPTLGGKNIAMGYIKQGLHKKGTEVGILVRKKLRKATVTPMPWIESKFY 481
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 61/106 (57%), Gaps = 17/106 (16%)
Query: 467 EERGLIAVQGPLSSTILQR------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--TR 513
+ R LIA+QGP S+ LQ + DLS+LYF R + + P L +R
Sbjct: 229 DSRALIALQGPASANALQSLIKKETSAETDLSTLYFGQCRQLHLTFPDGSSTPSRLLISR 288
Query: 514 AGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EIS+P EQ + + E L+S+ DVKLAGL ARDSL
Sbjct: 289 TGYTGEDGFEISIPTEQDANLPRRVAELLISNPDVKLAGLAARDSL 334
>gi|156977182|ref|YP_001448088.1| glycine cleavage system protein T2 [Vibrio harveyi ATCC BAA-1116]
gi|156528776|gb|ABU73861.1| hypothetical protein VIBHAR_05968 [Vibrio harveyi ATCC BAA-1116]
Length = 376
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 11 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 69
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 70 AAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 128
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L I L+ + ++R L+A+QGP ++ +L R +++ + FM R
Sbjct: 129 AHLQA------HLPSGIELEII--DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKV 179
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP E+ + L +E+V+ GLGARDSL
Sbjct: 180 ELLGVECIISRSGYTGEDGYEISVPAEKAEELARKLTGEEEVEWIGLGARDSL 232
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V+RKR G T P+R G E+F+A ++G +TSG P+
Sbjct: 271 AGGFPGADIILKQIETKDVARKRIGLVGQTKAPVREGAELFDAEGNKIGVVTSGTAGPNA 330
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 331 GKPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 374
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 145 DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKVELLGVECIISRSGYTGEDGYEISV 203
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E+ + L +E+V+ GLGARDSL
Sbjct: 204 PAEKAEELARKLTGEEEVEWIGLGARDSL 232
>gi|27366646|ref|NP_762173.1| glycine cleavage system T protein [Vibrio vulnificus CMCP6]
gi|27358212|gb|AAO07163.1| glycine cleavage system T protein [Vibrio vulnificus CMCP6]
Length = 381
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 145/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 16 KTPLHALHIEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTREAAGLFDVSHMGQLRLHGAG 74
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LES+ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 75 AAAFLESLVPVDIADLGEGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 133
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + A + D+ L+ + ++R L+A+QGP + +L R ++ + FM +
Sbjct: 134 NHLQA------HIPSDVELEII--DDRALLAIQGPKAVEVLSRFQPA-VAEMLFMDVQKL 184
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + AL ++E+V+ GLGARDSL
Sbjct: 185 ELLGVECIISRSGYTGEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSL 237
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ VSRKR G T P+R G E+F+ +VG +TSG P+
Sbjct: 277 GGFPGADIILKQIETKDVSRKRVGLVGQTKAPVREGAELFDGEGNKVGVVTSGTAGPNAG 336
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ +++G E++ VR K + + V KMPFV YY
Sbjct: 337 KPVSMAYLRSDLTEIGTEVFAEVRGKLLPMTVEKMPFVPQRYY 379
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
D+ L+ + ++R L+A+QGP + +L R ++ + FM + + G+ C ++R+GYT
Sbjct: 143 DVELEII--DDRALLAIQGPKAVEVLSRFQPA-VAEMLFMDVQKLELLGVECIISRSGYT 199
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISVP ++ + AL ++E+V+ GLGARDSL
Sbjct: 200 GEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSL 237
>gi|365898633|ref|ZP_09436578.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. STM 3843]
gi|365420544|emb|CCE09120.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. STM 3843]
Length = 383
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 148/248 (59%), Gaps = 16/248 (6%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
+PG+ S +RTPLY LH+S GGKMVPFAG+ MPVQY A + HLHTRS +FDVSH
Sbjct: 3 APGAVSSLLKRTPLYALHVSLGGKMVPFAGYEMPVQY-AAGVLKEHLHTRSAAGLFDVSH 61
Query: 248 MLQTVVTGKH-----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED 302
M Q + K LE + D+ + PG+ + FTN+ GGI DDL+V +
Sbjct: 62 MGQIALVPKSGRVADAALALERLVPQDILGIAPGRQRYAQFTNDAGGILDDLMVA-NFGE 120
Query: 303 SLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT 362
L LV NA+ + D L+ A L +Q L+ +R L+A+QGP ++ +L +
Sbjct: 121 HLVLVVNAACKNADEALLRA------GLSDVCEVQPLT--DRALLALQGPKAAYVLAKLC 172
Query: 363 DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLA 422
D+ S+ FM + P + G+ C ++R+GYTGEDG EISVP +Q + +ALLSD+D
Sbjct: 173 -ADVESMRFMDAGPRVVDGLDCYVSRSGYTGEDGFEISVPADQAEKLADALLSDKDALPI 231
Query: 423 GLGARDSL 430
GLGARDSL
Sbjct: 232 GLGARDSL 239
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP ++ +L + D+ S+ FM + P + G+ C ++R+GYTGEDG EISVP
Sbjct: 153 DRALLALQGPKAAYVLAKLC-ADVESMRFMDAGPRVVDGLDCYVSRSGYTGEDGFEISVP 211
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+Q + +ALLSD+D GLGARDSL
Sbjct: 212 ADQAEKLADALLSDKDALPIGLGARDSL 239
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNA--NDQRVGAITSGCPSPS 74
GGFPGA I Q ++G +R+R G + G P+R G +F A + + +G +TSG P+
Sbjct: 278 AGGFPGAENILGQFENGAARRRVGLRAEGRAPVREGAALFAAPGSSEPIGKVTSGGFGPT 337
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ + S V +L+ VR +R+ ++V MPFV + Y
Sbjct: 338 LNAPVAMGYVPTSLSAVDAQLFADVRGQRLPLRVAAMPFVPNTY 381
>gi|452966513|gb|EME71523.1| glycine cleavage system aminomethyltransferase T [Magnetospirillum
sp. SO-1]
Length = 373
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 140/231 (60%), Gaps = 10/231 (4%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE 259
PL LH G KMVPFAG++MPVQY A + A HLHTRS ++FDVSHM Q + G
Sbjct: 14 PLDALHRELGAKMVPFAGYAMPVQYPA-GVLAEHLHTRSAAALFDVSHMGQAEIRGAKAV 72
Query: 260 EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDL 319
E LE++ D+ L GK S+FTN+QGGI DDL+++K +D LFLV NA+ + D
Sbjct: 73 ELLETLVPGDIQALGIGKTRYSVFTNDQGGILDDLMISKLADDHLFLVINAACKHADFAH 132
Query: 320 MVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 379
+V K LG + L+ + E+R L+A+QGP ++ + + + S+ FMT T+
Sbjct: 133 LV------KHLGGKVELRMI--EDRSLLALQGPGAAVAMATLSP-EAISMTFMTIAEITV 183
Query: 380 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
AGI TR+GYTGEDG EISV + A+L VK AGLGARDSL
Sbjct: 184 AGIRVLATRSGYTGEDGWEISVANADAERLARAILGAPGVKPAGLGARDSL 234
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+ GGFPGA++I Q+ G R+R G G P R EI + R+G I SG
Sbjct: 264 KRRKAEGGFPGAAVICKQLAEGAPRRRVGIQPDGKAPARAHTEITDEAGNRLGEICSGGF 323
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PS +AMGY+ A++ +G +L + VR K +D V +PFV +Y+
Sbjct: 324 GPSAGGPVAMGYVPAAFAAIGTKLKLVVRGKAMDAHVCALPFVPHSYF 371
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K LG + L+ + E+R L+A+QGP ++ + + + S+ FMT T+AGI T
Sbjct: 135 KHLGGKVELRMI--EDRSLLALQGPGAAVAMATLSP-EAISMTFMTIAEITVAGIRVLAT 191
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISV + A+L VK AGLGARDSL
Sbjct: 192 RSGYTGEDGWEISVANADAERLARAILGAPGVKPAGLGARDSL 234
>gi|213406629|ref|XP_002174086.1| aminomethyltransferase [Schizosaccharomyces japonicus yFS275]
gi|212002133|gb|EEB07793.1| aminomethyltransferase [Schizosaccharomyces japonicus yFS275]
Length = 399
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 142/235 (60%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY LH++ G K+VPFAGF MP+QY +S+ SH TR +FDVSHM+Q V G+
Sbjct: 33 KKTPLYPLHVARGAKIVPFAGFEMPLQYKGMSVGDSHRWTRQHAGLFDVSHMVQWFVRGE 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ +LESI + + EL P TLS+FTNE GGI DD I++K + + ++V+NA+ D
Sbjct: 93 NATAFLESITPSSLQELKPMHSTLSVFTNETGGIVDDTIISKHDDKTYYIVTNAACADKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGP-LSSTILQRHTDLDLSSLYFMTSR 375
+ + +++ G I E R LIA+QGP + + + D SL F S
Sbjct: 153 TENLSKNLNKWTKGGVTID----RIEGRALIALQGPEAVAALAKLAVTFDFPSLKFGKSA 208
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDGVE+SVP + I E LL+D V+ GLGARDSL
Sbjct: 209 YIDVLGANCLVSRSGYTGEDGVEMSVPADDSMKIAETLLADSRVQPIGLGARDSL 263
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR G F G+S I ++ G SR+R GF G P R G + + VG +TSGCP
Sbjct: 292 GKRRRSEGNFVGSSRILKELMGGPSRRRVGFLVQGAPAREGSAV-EVDGVNVGRVTSGCP 350
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSL KNIAMGY+ KVG + + VR+K +V KMPFV+++Y+
Sbjct: 351 SPSLGKNIAMGYVRTGLHKVGTRVHINVRNKLRPAEVVKMPFVQTHYH 398
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 467 EERGLIAVQGP-LSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
E R LIA+QGP + + + D SL F S + G C ++R+GYTGEDGVE+S
Sbjct: 174 EGRALIALQGPEAVAALAKLAVTFDFPSLKFGKSAYIDVLGANCLVSRSGYTGEDGVEMS 233
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
VP + I E LL+D V+ GLGARDSL
Sbjct: 234 VPADDSMKIAETLLADSRVQPIGLGARDSL 263
>gi|407068256|ref|ZP_11099094.1| glycine cleavage system T protein [Vibrio cyclitrophicus ZF14]
Length = 377
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G++
Sbjct: 12 KTPLHALHVEEGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLHGEN 70
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ + D+
Sbjct: 71 AAAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKTQDI 129
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
D + A L D+ ++ + ++R L+A+QGP +S +L R ++ + FM +
Sbjct: 130 DHLTA------HLPADVEIEVI--DDRALLALQGPKASEVLARFQP-SVADMLFMDVQKV 180
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + + L S+ +V+ GLGARDSL
Sbjct: 181 DIDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSL 233
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI + V RKR G T P+R G E+F+A D ++G +TSG P+
Sbjct: 272 AGGFPGADIILEQIATKDVQRKRVGLVGQTKAPVREGAELFDAEDNKIGVVTSGTAGPNA 331
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ + +G E++ VR K++ + V KMPFV YY
Sbjct: 332 GKPVSMAYVRTDLAVIGTEVFAEVRGKKLPMTVEKMPFVPQRYY 375
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + ++R L+A+QGP +S +L R ++ + FM + I G+ C ++R+
Sbjct: 136 LPADVEIEVI--DDRALLALQGPKASEVLARFQP-SVADMLFMDVQKVDIDGVECIVSRS 192
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP + + L S+ +V+ GLGARDSL
Sbjct: 193 GYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSL 233
>gi|302144120|emb|CBI23225.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 138/221 (62%), Gaps = 5/221 (2%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPFAG+SMP+QY SI S ++ R S+FDVSHM + GK +LE + +ADV
Sbjct: 1 MVPFAGWSMPIQY-KDSIMDSTVNCRENGSLFDVSHMCGLSLKGKDCIPFLEKLVIADVA 59
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG 331
L PG GTL++FTNE+GG DD ++TK ++ ++LV NA R D+ + +KS G
Sbjct: 60 GLAPGTGTLTVFTNEKGGAIDDSVITKVKDNHIYLVVNAGCRDKDLAHIEEHMKAYKSKG 119
Query: 332 KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 391
D+ +ER L+A+QGPL++ +LQ T DLS L+F + I G C LTR GY
Sbjct: 120 GDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLFFGEFQILDINGATCFLTRTGY 177
Query: 392 TGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
TGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 178 TGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 218
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 67/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G S +R GF S+G P R EI + +G ITSG
Sbjct: 247 GKRRRAEGGFLGAEVILKQLEEGPSVRRVGFFSSGPPARSHSEIQDDKGNNIGEITSGGF 306
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNI MGY++ K G ++ + +R K D VTKMPFV + YY P
Sbjct: 307 SPCLKKNIGMGYVKSGSHKAGTKVKILIRGKPYDGVVTKMPFVPTKYYKP 356
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
+KS G D+ +ER L+A+QGPL++ +LQ T DLS L+F + I G C L
Sbjct: 115 YKSKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLFFGEFQILDINGATCFL 172
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 173 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 218
>gi|320158537|ref|YP_004190915.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
vulnificus MO6-24/O]
gi|319933849|gb|ADV88712.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
vulnificus MO6-24/O]
Length = 377
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 145/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 12 KTPLHALHIEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTREAAGLFDVSHMGQLRLHGAG 70
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LES+ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 71 AAAFLESLVPVDIVDLGEGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 129
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + A + D+ L+ + ++R L+A+QGP + +L R ++ + FM +
Sbjct: 130 NHLQA------HIPSDVELEII--DDRALLAIQGPKAVEVLSRFQPA-VAEMLFMDVQKL 180
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + AL ++E+V+ GLGARDSL
Sbjct: 181 ELLGVECIISRSGYTGEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSL 233
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ VSRKR G T P+R G E+F+ +VG +TSG P+
Sbjct: 273 GGFPGADIILKQIETKDVSRKRVGLVGQTKAPVREGAELFDGEGNKVGVVTSGTAGPNAG 332
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ +++G E++ VR K + + V KMPFV YY
Sbjct: 333 KPVSMAYLRSDLTEIGTEVFAEVRGKLLPMTVEKMPFVPQRYY 375
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
D+ L+ + ++R L+A+QGP + +L R ++ + FM + + G+ C ++R+GYT
Sbjct: 139 DVELEII--DDRALLAIQGPKAVEVLSRFQPA-VAEMLFMDVQKLELLGVECIISRSGYT 195
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISVP ++ + AL ++E+V+ GLGARDSL
Sbjct: 196 GEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSL 233
>gi|37676356|ref|NP_936752.1| glycine cleavage system T protein [Vibrio vulnificus YJ016]
gi|37200898|dbj|BAC96722.1| glycine cleavage system T protein [Vibrio vulnificus YJ016]
Length = 381
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 145/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 16 KTPLHALHIEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTREAAGLFDVSHMGQLRLHGAG 74
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LES+ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 75 AAAFLESLVPVDIVDLGEGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 133
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + A + D+ L+ + ++R L+A+QGP + +L R ++ + FM +
Sbjct: 134 NHLQA------HIPSDVELEII--DDRALLAIQGPKAVEVLSRFQPA-VAEMLFMDVQKL 184
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + AL ++E+V+ GLGARDSL
Sbjct: 185 ELLGVECIISRSGYTGEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSL 237
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ VSRKR G T P+R G E+F+ +VG +TSG P+
Sbjct: 277 GGFPGADIILKQIETKDVSRKRVGLVGQTKAPVREGAELFDGEGNKVGVVTSGTAGPNAG 336
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ +++G E++ VR K + + V KMPFV YY
Sbjct: 337 KPVSMAYLRSDLTEIGTEVFAEVRGKLLPMTVEKMPFVPQRYY 379
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
D+ L+ + ++R L+A+QGP + +L R ++ + FM + + G+ C ++R+GYT
Sbjct: 143 DVELEII--DDRALLAIQGPKAVEVLSRFQPA-VAEMLFMDVQKLELLGVECIISRSGYT 199
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISVP ++ + AL ++E+V+ GLGARDSL
Sbjct: 200 GEDGYEISVPADKAEALARALTAEEEVEWIGLGARDSL 237
>gi|395325627|gb|EJF58046.1| glycine cleavage system T protein [Dichomitus squalens LYAD-421
SS1]
Length = 414
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/240 (42%), Positives = 139/240 (57%), Gaps = 10/240 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+ +G +MVPFAG+SMP+ YG + ASH H R V +FDV HM+Q+ G
Sbjct: 40 RKTGLYDFHVENGARMVPFAGYSMPLSYGTLGAVASHHHVRKSVGLFDVGHMVQSNFRGP 99
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE + + + L P TLS+ NE+GGI DD ++TK ED+ ++V+NA RR D
Sbjct: 100 TATAFLEWLTPSSLKFLSPYTSTLSVLLNERGGIIDDTVITKHAEDAFYVVTNAGRRDRD 159
Query: 317 MDLM------VAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ A ++ K+ GK H E+ GL+A+QGP ++ LQ T DL L
Sbjct: 160 LAWFKEKLEEWNAGEKAKAEGKVEHEVL---EDWGLLALQGPEAAQYLQGLTSFDLRELT 216
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
F S I G + R GYTGEDG EIS+P Q + + LLS V+L GLGARDSL
Sbjct: 217 FGRSAFVPIEGFNLHVARGGYTGEDGFEISIPPSQTVEVAQ-LLSKPPVQLTGLGARDSL 275
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
GK RRE G F GA ++ +K G R+R G G P R G IF ++++++G++TSG
Sbjct: 304 GKERRENGEFIGAEGVRKHLKEGPPRRRVGMIVEGAPARQGARIFAPSSNEQIGSVTSGI 363
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSPSL KNIAMGY++ + K G E+ V VR+K + MPFV + YY
Sbjct: 364 PSPSLGKNIAMGYVKSGWHKKGTEVEVDVRNKLQKAVLRTMPFVPARYY 412
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 448 SNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI 507
+ ++ K+ GK H E+ GL+A+QGP ++ LQ T DL L F S I G
Sbjct: 172 AGEKAKAEGKVEHEVL---EDWGLLALQGPEAAQYLQGLTSFDLRELTFGRSAFVPIEGF 228
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R GYTGEDG EIS+P Q + + LLS V+L GLGARDSL
Sbjct: 229 NLHVARGGYTGEDGFEISIPPSQTVEVAQ-LLSKPPVQLTGLGARDSL 275
>gi|83309865|ref|YP_420129.1| glycine cleavage system aminomethyltransferase T [Magnetospirillum
magneticum AMB-1]
gi|82944706|dbj|BAE49570.1| Glycine cleavage system T protein [Magnetospirillum magneticum
AMB-1]
Length = 371
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 138/231 (59%), Gaps = 10/231 (4%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE 259
PL LH G KMVPFAG+SMPVQY A + A HLHTRS ++FDVSHM Q + G
Sbjct: 12 PLDALHRELGAKMVPFAGYSMPVQYPA-GVLAEHLHTRSGAALFDVSHMGQASIRGAKAV 70
Query: 260 EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDL 319
E LE++ D+ L GK S+FTN+QGGI DDL+++K ED LFLV NA+ + D
Sbjct: 71 ELLETLVPGDIQALGLGKTRYSVFTNDQGGILDDLMISKLAEDHLFLVINAACKHADFAH 130
Query: 320 MVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 379
+ A LG + L + E+R L+A+QGP ++ + + ++ FMT T+
Sbjct: 131 LKA------HLGDKVELSMI--EDRSLLALQGPGAAAAMVTLCP-EAGAMTFMTIAEITV 181
Query: 380 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
AGI C TR+GYTGEDG EISV + A+L+ V AGLGARDSL
Sbjct: 182 AGIKCLATRSGYTGEDGWEISVANADVETLARAILAAPGVMPAGLGARDSL 232
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR GGFPGA++IQ Q+ G R+R G G P R EI + R+G I SG
Sbjct: 262 KRRRAEGGFPGAAVIQKQLAEGAPRRRVGIQPDGKAPARAHTEITDEAGNRLGEICSGGF 321
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PS +AMGY+ A++ VG +L + VR K +D V +PFV Y+
Sbjct: 322 GPSAGGPVAMGYVPAAFAGVGTKLKLVVRGKAMDAHVCDLPFVPHRYF 369
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
LG + L + E+R L+A+QGP ++ + + ++ FMT T+AGI C TR+
Sbjct: 135 LGDKVELSMI--EDRSLLALQGPGAAAAMVTLCP-EAGAMTFMTIAEITVAGIKCLATRS 191
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISV + A+L+ V AGLGARDSL
Sbjct: 192 GYTGEDGWEISVANADVETLARAILAAPGVMPAGLGARDSL 232
>gi|299131740|ref|ZP_07024935.1| glycine cleavage system T protein [Afipia sp. 1NLS2]
gi|298591877|gb|EFI52077.1| glycine cleavage system T protein [Afipia sp. 1NLS2]
Length = 383
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 145/245 (59%), Gaps = 16/245 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++PS + PL+ LH+S GGKMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q
Sbjct: 6 NTPSELKNVPLHALHVSCGGKMVPFAGYEMPVQY-AAGVLKEHLHTRTSAGLFDVSHMGQ 64
Query: 251 TVVTGKH-----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLF 305
+ K LE I D+ + PG+ +LFTN++GGI DDL+V D LF
Sbjct: 65 IRLRPKSGRIEDAATALERIVPQDILGIAPGRQRYALFTNDEGGILDDLMVAN-FGDELF 123
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD 365
LV NA+ + D A R L +D + + +R LIA+QGP + +L + D
Sbjct: 124 LVVNAACKAAD-----EAHLR-DHLARDC--EIIPLPDRALIALQGPKAVDVLAKF-DAA 174
Query: 366 LSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
++S+ FM S P T+ GIPC ++R+GYTGEDG EISVP +V LL+D V GLG
Sbjct: 175 IASMRFMDSGPRTLMGIPCFVSRSGYTGEDGFEISVPAADAERLVTTLLADAAVLPVGLG 234
Query: 426 ARDSL 430
ARDSL
Sbjct: 235 ARDSL 239
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L + D ++S+ FM S P T+ GIPC ++R+GYTGEDG EISVP
Sbjct: 153 DRALIALQGPKAVDVLAKF-DAAIASMRFMDSGPRTLMGIPCFVSRSGYTGEDGFEISVP 211
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+V LL+D V GLGARDSL
Sbjct: 212 AADAERLVTTLLADAAVLPVGLGARDSL 239
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 13 KRRRETGG----FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGA 65
K RR+ G FPGA+ I Q++ G R+R G G P+R G +F ++ ++G
Sbjct: 269 KARRKGGAREGRFPGATTILRQLEEGAPRRRVGLKVEGRAPVREGAPLFADASSTNKIGR 328
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG PS+ +A+GY+ + G L+ +R R+ ++ K+PFV Y
Sbjct: 329 VTSGGFGPSVNGPVAIGYVPTPLATPGTGLFTELRGSRLPMQTAKLPFVAPTY 381
>gi|90577968|ref|ZP_01233779.1| glycine cleavage system protein T2 [Photobacterium angustum S14]
gi|90441054|gb|EAS66234.1| glycine cleavage system protein T2 [Photobacterium angustum S14]
Length = 372
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 147/234 (62%), Gaps = 11/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ LH+ G KMVPFAG+ MPVQYG + + H+H R +FDVSHM Q + G+
Sbjct: 6 KQTPLHGLHIEMGAKMVPFAGYDMPVQYG-LGVKKEHIHCRDSAGLFDVSHMGQVRLKGQ 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ LE++ D+ +L GK ++FTNE GGI+DDL+VT D LFLV NA+ ++ D
Sbjct: 65 NAATLLETLVPVDIVDLPEGKQRYAVFTNENGGIEDDLMVT-NFGDHLFLVVNAACKEQD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A L + L+ + E+R L+A+QGP ++ +L + +S + FM +
Sbjct: 124 IAHLKA------HLKDGVELEVI--EDRALLALQGPKAAMVLAE-LNPAVSDMVFMDAAK 174
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+ C ++R+GYTGEDG EISVP ++ + ALL+ +V+ GLGARDSL
Sbjct: 175 VTLLGVECYVSRSGYTGEDGYEISVPNDKAEELARALLAFNEVEWIGLGARDSL 228
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R RE GGFPGA II Q+++ VSRKR G + P+R G ++F+A D +
Sbjct: 256 ITPSRRAGGVRE-GGFPGADIILEQLQTKQVSRKRVGLVGQSNAPVREGTKLFDAEDNEI 314
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ +AMGYI +K+G ++ VR K++ + + KMPFV YY
Sbjct: 315 GIVTSGTFGPTKGIPVAMGYIATEANKLGEMVYAEVRGKKLPMTIDKMPFVPQRYY 370
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L + +S + FM + T+ G+ C ++R+GYTGEDG EISV
Sbjct: 141 EDRALLALQGPKAAMVLAE-LNPAVSDMVFMDAAKVTLLGVECYVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + ALL+ +V+ GLGARDSL
Sbjct: 200 PNDKAEELARALLAFNEVEWIGLGARDSL 228
>gi|358058432|dbj|GAA95395.1| hypothetical protein E5Q_02049 [Mixia osmundae IAM 14324]
Length = 422
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 147/249 (59%), Gaps = 6/249 (2%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVS-ITASHLHTRSKVSVFDV 245
++ S P A ++T LYDLH GGKMVPF GF MP+ Y H H R+ +FDV
Sbjct: 34 YAEDSGPRALRQTKLYDLHRLQGGKMVPFGGFDMPLFYKTTGGQVVEHKHVRAHAGLFDV 93
Query: 246 SHMLQTVVTGKHREEWLESICVADVHEL----DPGKGTLSLFTNEQGGIQDDLIVTKTLE 301
SHM+Q+ + GK E+L + + L +LS+ N GGI DDL++T+ E
Sbjct: 94 SHMVQSKLVGKGATEFLMRLTPTSIDALAFTDTLYSSSLSVLLNHDGGILDDLLITRQGE 153
Query: 302 DSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRH 361
D ++V+NA RR+ D+ + F S +++F E++GL+A+QGP + ILQ+
Sbjct: 154 DEYYIVTNAGRREQDLHWIREQLAEFNS-ANTYNIRFDVLEKQGLVALQGPKAMRILQQF 212
Query: 362 TDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKL 421
TD DL++L+F + + G+ C + R GYTGEDG EIS+P ++ T + + +LS +DV L
Sbjct: 213 TDFDLTTLHFGKATFANVDGVRCHIARGGYTGEDGFEISIPPKETTSLSKKILSHQDVML 272
Query: 422 AGLGARDSL 430
GL ARDSL
Sbjct: 273 IGLAARDSL 281
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 67/96 (69%)
Query: 460 HLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGE 519
+++F E++GL+A+QGP + ILQ+ TD DL++L+F + + G+ C + R GYTGE
Sbjct: 186 NIRFDVLEKQGLVALQGPKAMRILQQFTDFDLTTLHFGKATFANVDGVRCHIARGGYTGE 245
Query: 520 DGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
DG EIS+P ++ T + + +LS +DV L GL ARDSL
Sbjct: 246 DGFEISIPPKETTSLSKKILSHQDVMLIGLAARDSL 281
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAN-DQRVGAI 66
++ +R E+ F GA + ++ G +++R GF R G IF + +++G I
Sbjct: 308 IVSKARRTPESATFIGAQRVLQVLREGPAKRRVGFVCQSAVPREGAPIFTEDGSEQIGVI 367
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
TSG PSP+ KN++MGYI+ Y K G + V VR + D V K+PFV+ YY
Sbjct: 368 TSGIPSPTANKNVSMGYIKSGYHKQGTAVQVAVRRQNRDAVVAKLPFVEPKYY 420
>gi|395447439|ref|YP_006387692.1| glycine cleavage system T protein [Pseudomonas putida ND6]
gi|388561436|gb|AFK70577.1| glycine cleavage system T protein [Pseudomonas putida ND6]
Length = 373
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 145/233 (62%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q ++ G
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIILRGAD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V ED+LFLV NA+ ++ D+
Sbjct: 66 AAKALESLVPVDIIDLPMGMQRYAMFTNEQGGILDDLMVANLGEDTLFLVVNAACKEQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + +G +Q L EER L+A+QGP + +L+R +++ + FM R
Sbjct: 126 AHLQS------HIGNRCEVQPLF-EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ + C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 178 TLLEVDCFVSRSGYTGEDGYEISVPVNAADALARRLLAEPEVQPIGLGARDSL 230
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G GFPGA I + ++ GV+RKR G P+R G +I +
Sbjct: 250 IEASLLWAISKVRRAEGARAAGFPGAEAIFAHVRDGVARKRVGLLPQERTPVREGADIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYI+ ++ + L+ VR K+V +KV+KMPFV
Sbjct: 310 ANDKPVGKVCSGGFGPTLAAPVAMGYIDSEHAALDTALFAVVRGKKVALKVSKMPFVTPR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R +++ + FM R T+ + C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRVTLLEVDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V+ GLGARDSL
Sbjct: 202 PVNAADALARRLLAEPEVQPIGLGARDSL 230
>gi|148256735|ref|YP_001241320.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium
sp. BTAi1]
gi|146408908|gb|ABQ37414.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. BTAi1]
Length = 384
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 150/248 (60%), Gaps = 17/248 (6%)
Query: 189 PGSSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
P ++P++ +RTPLY LH+S GGKMVPFAG+ MPVQY A + HLHTR+ +FDVSH
Sbjct: 4 PVATPASPLKRTPLYALHVSLGGKMVPFAGYEMPVQY-APGVLKEHLHTRAAAGLFDVSH 62
Query: 248 MLQTVVTGKH-----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED 302
M Q V K LE + D+ + PG+ + FTN +GGI DDL+V +
Sbjct: 63 MGQVAVVPKSGTVADAAAALERLVPQDIIGIPPGRQRYAQFTNAEGGILDDLMVAN-FGE 121
Query: 303 SLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT 362
L LV NA+ + D+ L+ L +Q L+ +R L+A+QGP ++++L +
Sbjct: 122 HLVLVVNAACKDADIQLL------RDGLSDVCDVQPLA--DRALLALQGPKAASVLAKFC 173
Query: 363 DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLA 422
D ++ FM + P + G+ C ++R+GYTGEDG EISVP ++ + EALLSD+DV
Sbjct: 174 -ADAEAMRFMDAGPRNVDGLTCYVSRSGYTGEDGYEISVPADKAEQLAEALLSDKDVLPI 232
Query: 423 GLGARDSL 430
GLGARDSL
Sbjct: 233 GLGARDSL 240
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 38/186 (20%)
Query: 376 PCTIAGIPCTLTR-AGYTGEDG-----VEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
P I GIP R A +T +G + ++ GE +V A D D++L RD
Sbjct: 87 PQDIIGIPPGRQRYAQFTNAEGGILDDLMVANFGEHLVLVVNAACKDADIQLL----RDG 142
Query: 430 LSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDL 489
LS D+ P+ +R L+A+QGP ++++L +
Sbjct: 143 LS-DVCDVQPL--------------------------ADRALLALQGPKAASVLAKFC-A 174
Query: 490 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 549
D ++ FM + P + G+ C ++R+GYTGEDG EISVP ++ + EALLSD+DV GL
Sbjct: 175 DAEAMRFMDAGPRNVDGLTCYVSRSGYTGEDGYEISVPADKAEQLAEALLSDKDVLPIGL 234
Query: 550 GARDSL 555
GARDSL
Sbjct: 235 GARDSL 240
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA I +Q SG +R+R G G P+R G +F D + +G +TSG P+
Sbjct: 279 AGGFPGAGKILAQFDSGAARRRVGLKPEGRAPVREGATLFATADSAEPIGKVTSGGFGPT 338
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ A S + L+ VR +R+ ++V PFV + Y
Sbjct: 339 LNAPVAMGYVPTALSALDTVLFADVRGQRLPLRVAATPFVPNTY 382
>gi|444425688|ref|ZP_21221123.1| glycine cleavage system protein T2 [Vibrio campbellii CAIM 519 =
NBRC 15631]
gi|444241032|gb|ELU52562.1| glycine cleavage system protein T2 [Vibrio campbellii CAIM 519 =
NBRC 15631]
Length = 372
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIIDLGAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L I L+ + ++R L+A+QGP ++ +L R +++ + FM R
Sbjct: 125 AHLQA------HLPSGIELEII--DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + L +E+V+ GLGARDSL
Sbjct: 176 ELLGVECIISRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSL 228
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V+RKR G T P+R G E+++A+ ++G +TSG P+
Sbjct: 267 AGGFPGADIILKQIETKDVARKRIGLVGQTKAPVREGAELYDADGNKIGVVTSGTAGPNA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G+EL+ VR K + + V KMPFV YY
Sbjct: 327 GKPVSMGYVRADLAAIGIELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKVELLGVECIISRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L +E+V+ GLGARDSL
Sbjct: 200 PADKAEELARKLTGEEEVEWIGLGARDSL 228
>gi|367472756|ref|ZP_09472332.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. ORS 285]
gi|365274939|emb|CCD84800.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. ORS 285]
Length = 384
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 151/248 (60%), Gaps = 17/248 (6%)
Query: 189 PGSSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
P ++PS +RTPLY LH+S GGKMVPFAG+ MPVQY A + HLHTRS +FDVSH
Sbjct: 4 PAATPSTSLKRTPLYALHVSLGGKMVPFAGYEMPVQY-APGVLKEHLHTRSHAGLFDVSH 62
Query: 248 MLQTVVTGKH-----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED 302
M Q + K LE + D+ + PG+ + FTN +GGI DDL+V +
Sbjct: 63 MGQVALVPKSGTVADAAAALERLVPQDIIGIPPGRQRYAQFTNAEGGILDDLMVAN-FGE 121
Query: 303 SLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT 362
L LV NA+ ++ D+ L+ +D + ++H +R L+A+QGP ++++L +
Sbjct: 122 HLVLVVNAACKEADIALL---RDGVSDV-CEVH----PLADRALLALQGPKAASVLAKFC 173
Query: 363 DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLA 422
D ++ FM S P + G+ C ++R+GYTGEDG EISVP ++ + EALLSD+DV
Sbjct: 174 -ADAEAMRFMDSGPRMVDGLACYVSRSGYTGEDGYEISVPTDKAEQLAEALLSDKDVLPI 232
Query: 423 GLGARDSL 430
GLGARDSL
Sbjct: 233 GLGARDSL 240
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP ++++L + D ++ FM S P + G+ C ++R+GYTGEDG EISVP
Sbjct: 154 DRALLALQGPKAASVLAKFC-ADAEAMRFMDSGPRMVDGLACYVSRSGYTGEDGYEISVP 212
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + EALLSD+DV GLGARDSL
Sbjct: 213 TDKAEQLAEALLSDKDVLPIGLGARDSL 240
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA I +Q G +R+R G G P+R G +F D + VG +TSG P+
Sbjct: 279 AGGFPGADKILAQFDGGATRRRVGLRPEGRAPVREGATLFATADSSEPVGKVTSGGFGPT 338
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ A + + ++L+ VR +R+ ++V PFV + Y
Sbjct: 339 LNAPVAMGYVPTALAALDMQLFADVRGQRLPLRVAATPFVPNTY 382
>gi|218676579|ref|YP_002395398.1| glycine cleavage system T protein [Vibrio splendidus LGP32]
gi|218324847|emb|CAV26581.1| glycine cleavage system T protein [Vibrio splendidus LGP32]
Length = 388
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 141/232 (60%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G +
Sbjct: 24 TPLHALHVEEGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLHGANA 82
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ + D+D
Sbjct: 83 AAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKTQDID 141
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + ++R L+A+QGP +S +L R ++ + FM +
Sbjct: 142 HLTA------HLPADVEMEVI--DDRALLALQGPKASEVLARFQP-SVADMLFMDVQKVD 192
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + + L S+ +V+ GLGARDSL
Sbjct: 193 IDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSL 244
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI + V RKR G T P+R G E+F+A D ++G +TSG P+
Sbjct: 283 AGGFPGADIILEQIATKDVQRKRVGLVGQTKAPVREGAELFDAEDNKIGVVTSGTAGPNA 342
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ + +G E++ VR K++ + V KMPFV YY
Sbjct: 343 GKPVSMAYVRTDIAVIGTEVFAEVRGKKLPMTVEKMPFVPQRYY 386
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + ++R L+A+QGP +S +L R ++ + FM + I G+ C ++R+
Sbjct: 147 LPADVEMEVI--DDRALLALQGPKASEVLARFQP-SVADMLFMDVQKVDIDGVECIVSRS 203
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP + + L S+ +V+ GLGARDSL
Sbjct: 204 GYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSL 244
>gi|153833016|ref|ZP_01985683.1| glycine cleavage system T protein [Vibrio harveyi HY01]
gi|148870737|gb|EDL69643.1| glycine cleavage system T protein [Vibrio harveyi HY01]
Length = 376
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 11 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 69
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 70 AAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 128
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L I L+ + ++R L+A+QGP ++ +L R +++ + FM R
Sbjct: 129 AHLQA------HLPSGIELEII--DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKV 179
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + L +E+V+ GLGARDSL
Sbjct: 180 ELLGVECIVSRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSL 232
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 271 AGGFPGADIILKQIETKDVARKRIGLVGQTKAPVREGAELFDADGNKIGVVTSGTAGPNA 330
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 331 GKPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 374
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 145 DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKVELLGVECIVSRSGYTGEDGYEISV 203
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L +E+V+ GLGARDSL
Sbjct: 204 PADKAEELARKLTGEEEVEWIGLGARDSL 232
>gi|254229180|ref|ZP_04922599.1| glycine cleavage system T protein [Vibrio sp. Ex25]
gi|262395530|ref|YP_003287383.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. Ex25]
gi|451972851|ref|ZP_21926052.1| glycine cleavage system T protein [Vibrio alginolyticus E0666]
gi|151938265|gb|EDN57104.1| glycine cleavage system T protein [Vibrio sp. Ex25]
gi|262339124|gb|ACY52918.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. Ex25]
gi|451931153|gb|EMD78846.1| glycine cleavage system T protein [Vibrio alginolyticus E0666]
Length = 372
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLLGDG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L+ GK + FTNE+GGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L + E+R L+A+QGP ++ +L R ++S + FM R
Sbjct: 125 AHLQA------HLPSGVELDII--EDRALLAIQGPKAAAVLARFAP-EVSDMLFMDIRKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L ++E+V+ GLGARDSL
Sbjct: 176 DILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEEEVEWIGLGARDSL 228
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 268 GGFPGADIILKQIETKDVARKRVGLVGQTKAPVREGAELFDADGVKIGVVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 328 KPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L R ++S + FM R I G C ++R+GYTGEDG EISV
Sbjct: 141 EDRALLAIQGPKAAAVLARFAP-EVSDMLFMDIRKVDILGAECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L ++E+V+ GLGARDSL
Sbjct: 200 PADKAEELARKLTAEEEVEWIGLGARDSL 228
>gi|384262827|ref|YP_005418014.1| aminomethyltransferase [Rhodospirillum photometricum DSM 122]
gi|378403928|emb|CCG09044.1| Aminomethyltransferase [Rhodospirillum photometricum DSM 122]
Length = 581
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 154/261 (59%), Gaps = 15/261 (5%)
Query: 170 PKYFLKFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSI 229
P+ L +S+ L S S+ +TPL+DLH + GGK+VPFAG+++PV Y A +
Sbjct: 179 PRRILPLMSWRPPLAV-----SDLSSCLKTPLFDLHQTLGGKLVPFAGYALPVSYPA-GV 232
Query: 230 TASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGG 289
HLHTR++ S+FDVSHM Q V+ G R LE++ L G+ ++FTN+ GG
Sbjct: 233 LREHLHTRAQASLFDVSHMGQVVLGGAGRVALLEALTPGAFASLGIGRQRYTVFTNDHGG 292
Query: 290 IQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAV 349
I DDL+V+ +D LF+V NA+ + D L+ A RF + H+ L E+R L+A+
Sbjct: 293 ILDDLMVSNRGDD-LFVVVNAACKAADFALLEEAAPRFGA-----HVTRL--EDRALLAL 344
Query: 350 QGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHI 409
QGP + ++ D + +L FM ++ G+ C +TR+GYTGEDGVEISVP E +
Sbjct: 345 QGPEAVAVIA-SLDPGVLALPFMGGATLSLDGVACFVTRSGYTGEDGVEISVPAEHAAVL 403
Query: 410 VEALLSDEDVKLAGLGARDSL 430
LL D V AGLGARDSL
Sbjct: 404 ARRLLDDPRVAPAGLGARDSL 424
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGC 70
GK RR GGFPGA++I Q+ G +R+R G P+RP E+ + + + VG +TSG
Sbjct: 453 GKERRAQGGFPGAAVILEQLAHGPARRRVGLAFDERTPVRPPAEVLDGDGRVVGHVTSGG 512
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+PSL +A+ +E A++ +G L V VR K +V MPFV +Y P
Sbjct: 513 FAPSLDAPVAIALVEAAFASLGQALTVPVRGKPRPARVVPMPFVPHHYARP 563
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + ++ D + +L FM ++ G+ C +TR+GYTGEDGVEISV
Sbjct: 337 EDRALLALQGPEAVAVIA-SLDPGVLALPFMGGATLSLDGVACFVTRSGYTGEDGVEISV 395
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + LL D V AGLGARDSL
Sbjct: 396 PAEHAAVLARRLLDDPRVAPAGLGARDSL 424
>gi|84393495|ref|ZP_00992250.1| glycine cleavage system T protein [Vibrio splendidus 12B01]
gi|84375848|gb|EAP92740.1| glycine cleavage system T protein [Vibrio splendidus 12B01]
Length = 377
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 141/232 (60%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G +
Sbjct: 13 TPLHALHVEEGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLHGANA 71
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ + D+D
Sbjct: 72 AAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKTQDID 130
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + ++R L+A+QGP +S +L R ++ + FM +
Sbjct: 131 HLTA------HLPADVEMEVI--DDRALLALQGPKASEVLARFQP-SVADMLFMDVQKVD 181
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + + L S+ +V+ GLGARDSL
Sbjct: 182 IDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSL 233
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI + V RKR G T P+R G E+F+A D ++G +TSG P+
Sbjct: 272 AGGFPGADIILEQIATKDVQRKRVGLVGQTKAPVREGAELFDAEDNKIGVVTSGTAGPNA 331
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ + +G E++ VR K++ + V KMPFV Y+
Sbjct: 332 GKPVSMAYVRTDLAAIGTEVFADVRGKKLPMTVEKMPFVPQRYF 375
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + ++R L+A+QGP +S +L R ++ + FM + I G+ C ++R+
Sbjct: 136 LPADVEMEVI--DDRALLALQGPKASEVLARFQP-SVADMLFMDVQKVDIDGVECIVSRS 192
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP + + L S+ +V+ GLGARDSL
Sbjct: 193 GYTGEDGYEISVPNDHAEALARKLTSEAEVEWIGLGARDSL 233
>gi|350533324|ref|ZP_08912265.1| glycine cleavage system protein T2 [Vibrio rotiferianus DAT722]
Length = 372
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L I L+ + ++R L+A+QGP ++ +L R +++ + FM R
Sbjct: 125 AHLEA------HLPSGIELEII--DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + L +E+V+ GLGARDSL
Sbjct: 176 ELLGVECIVSRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSL 228
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V RKR G T P+R G E+F+A ++G +TSG P+
Sbjct: 267 AGGFPGADIILKQIETKDVVRKRIGLVGQTKAPVREGAELFDAEGNKIGVVTSGTAGPNA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K++ + V KMPFV YY
Sbjct: 327 GKPVSMGYVRADLAAIGTELFAEVRGKKLPMTVEKMPFVPQRYY 370
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKVELLGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L +E+V+ GLGARDSL
Sbjct: 200 PADKAEELARKLTGEEEVEWIGLGARDSL 228
>gi|423687956|ref|ZP_17662759.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Vibrio fischeri
SR5]
gi|371492459|gb|EHN68065.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Vibrio fischeri
SR5]
Length = 372
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 145/234 (61%), Gaps = 11/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+T LYD+H+ G KMVPFAG+ MPVQY + + HLHTR+ +FDVSHM Q + GK
Sbjct: 6 HKTALYDIHVVAGAKMVPFAGYEMPVQY-PLGVKKEHLHTRNAAGLFDVSHMGQLRLKGK 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ LE++ D+ +L K + FTN+ GGI DDL+V D LF+V NA+ ++ D
Sbjct: 65 NAAAALEALVPVDIIDLPSQKQRYAFFTNDNGGIIDDLMVA-NFGDHLFIVVNAACKEQD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A +L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM +
Sbjct: 124 IAHLAA------NLPADVEIEVI--EDRALLALQGPQAADVLSRLQPF-VANMLFMDTAV 174
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI C ++R+GYTGEDG EISVP ++ + E L S E+V+ GLGARDSL
Sbjct: 175 VEINGIECYVSRSGYTGEDGYEISVPNDKAAELAETLTSFEEVEWIGLGARDSL 228
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIF 56
+ + LL K RR G GFPGA +I QI++ V+RKR G T P+R G +++
Sbjct: 248 VEASLLWAISKNRRADGERAAGFPGADVILKQIETKDVNRKRVGLVGQTKAPVREGCKLY 307
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+AND +G +TSG P+ K ++M Y+ + +G E++ VR K++ + V KMPFV
Sbjct: 308 DANDNEIGIVTSGTAGPTAGKPVSMAYVRTDLANLGTEVFADVRGKKLPMTVEKMPFVPQ 367
Query: 117 NYY 119
YY
Sbjct: 368 RYY 370
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM + I GI C ++R
Sbjct: 130 NLPADVEIEVI--EDRALLALQGPQAADVLSRLQPF-VANMLFMDTAVVEINGIECYVSR 186
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP ++ + E L S E+V+ GLGARDSL
Sbjct: 187 SGYTGEDGYEISVPNDKAAELAETLTSFEEVEWIGLGARDSL 228
>gi|119495829|ref|XP_001264691.1| glycine cleavage system T protein [Neosartorya fischeri NRRL 181]
gi|119412853|gb|EAW22794.1| glycine cleavage system T protein [Neosartorya fischeri NRRL 181]
Length = 485
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 154/272 (56%), Gaps = 22/272 (8%)
Query: 181 SGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKV 240
+G+T ++ ++ ++T LYDLH++ G KMVPFAG+SMP+QY +S SH TR K
Sbjct: 64 NGVTRRYASSTASGPVKKTQLYDLHIARGAKMVPFAGYSMPLQYSDLSHVESHHWTREKA 123
Query: 241 SVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKT 299
SVFDVSHM+Q ++G E L + + + +L P TLS E GGI DD ++T+
Sbjct: 124 SVFDVSHMVQHHLSGPGAMELLMKVTPSSLDKLKPNSSTLSCLLEEGTGGIVDDTVITRL 183
Query: 300 LEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ 359
D+ + V+NA RR D+ + A + ++ +++ R L+A+QGPL++++LQ
Sbjct: 184 DGDAFYFVTNAGRRTEDLAFLQAEIEAYRQTHGADSIKWEILANRALVALQGPLAASVLQ 243
Query: 360 ---------RHTDLDLSSLYFMTSRPC-------TIAGIPCTLTRAGYTGEDGVEISVPG 403
D DLS+LYF R T P ++R GYTGEDG EIS+P
Sbjct: 244 PLISSHGAVSPADTDLSTLYFGNCRSLHLTLPDGTPTQQPLLISRTGYTGEDGFEISIPT 303
Query: 404 EQC----THIVEALLSD-EDVKLAGLGARDSL 430
C T + E LLS+ E V+LAGL ARDSL
Sbjct: 304 AGCPSLPTQVTELLLSNPEQVRLAGLAARDSL 335
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 70/120 (58%), Gaps = 10/120 (8%)
Query: 12 GKRRRE--TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQ---R 62
GK RR+ T F GA+ I Q+ S +S++R GFT G P R G + + D+ +
Sbjct: 364 GKDRRDPATATFNGAATILPQLASPAKTLSQRRVGFTVEKGSPAREGAIVVDLGDESHPQ 423
Query: 63 VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+G ITSG PSPSL NIAMGYI+ K G E+ V VR+K VT MP+V+S +Y P
Sbjct: 424 IGVITSGLPSPSLGGTNIAMGYIKNGMHKKGTEVGVLVRNKVRKATVTGMPWVESKFYRP 483
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 21/109 (19%)
Query: 468 ERGLIAVQGPLSSTILQ---------RHTDLDLSSLYFMTSRPC-------TIAGIPCTL 511
R L+A+QGPL++++LQ D DLS+LYF R T P +
Sbjct: 227 NRALVALQGPLAASVLQPLISSHGAVSPADTDLSTLYFGNCRSLHLTLPDGTPTQQPLLI 286
Query: 512 TRAGYTGEDGVEISVPGEQC----THIVEALLSD-EDVKLAGLGARDSL 555
+R GYTGEDG EIS+P C T + E LLS+ E V+LAGL ARDSL
Sbjct: 287 SRTGYTGEDGFEISIPTAGCPSLPTQVTELLLSNPEQVRLAGLAARDSL 335
>gi|388602157|ref|ZP_10160553.1| glycine cleavage system protein T2 [Vibrio campbellii DS40M4]
Length = 372
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIIDLGAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L I L+ + ++R L+A+QGP ++ +L R +++ + FM R
Sbjct: 125 AHLQA------HLPSGIELEII--DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + L +E+V+ GLGARDSL
Sbjct: 176 ELLGVECIVSRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSL 228
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V+RKR G T P+R G E+++A+ ++G +TSG P+
Sbjct: 267 AGGFPGADIILKQIETKDVARKRIGLVGQTKAPVREGAELYDADGNKIGVVTSGTAGPNA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 327 GKPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKVELLGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L +E+V+ GLGARDSL
Sbjct: 200 PADKAEELARKLTGEEEVEWIGLGARDSL 228
>gi|409427289|ref|ZP_11261807.1| glycine cleavage system T protein [Pseudomonas sp. HYS]
Length = 374
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLH+R + +FDVSHM Q ++G
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHSREQAGLFDVSHMGQIRLSGAG 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNE GGI DDL+V + LFLV NA+ ++ D+
Sbjct: 67 AAKALESLVPVDIIDLPVGMQRYAMFTNEHGGILDDLMVANLGNNELFLVVNAACKEQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R K +G +Q L EER L+A+QGP + +L+R +++ + FM +P
Sbjct: 127 -----AHLR-KHIGDQCQIQPLF-EERALLALQGPAAVKVLERLAP-EVAKMTFMQFQPV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP E + LL++ +V GLGARDSL
Sbjct: 179 QLLGSDCFVSRSGYTGEDGFEISVPAENAEALARRLLAEAEVAAIGLGARDSL 231
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q +SGV+RKR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGERAGGFPGAEAIFAQQQSGVARKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G++ SG PSL +AMGY++ A+ + LW VR KRV +KV+KMPFV
Sbjct: 311 EAGTVIGSVCSGGFGPSLNAPVAMGYLDAAHIALETPLWAIVRGKRVAMKVSKMPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K +G +Q L EER L+A+QGP + +L+R +++ + FM +P + G C ++
Sbjct: 131 KHIGDQCQIQPLF-EERALLALQGPAAVKVLERLAP-EVAKMTFMQFQPVQLLGSDCFVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISVP E + LL++ +V GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVPAENAEALARRLLAEAEVAAIGLGARDSL 231
>gi|26987722|ref|NP_743147.1| glycine cleavage system T protein [Pseudomonas putida KT2440]
gi|24982410|gb|AAN66611.1|AE016288_10 glycine cleavage system T protein [Pseudomonas putida KT2440]
Length = 373
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 144/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q ++ G
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIILRGAD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V ED+LFLV NA+ ++ D+
Sbjct: 66 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGEDTLFLVVNAACKEQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ +G +Q L EER L+A+QGP + +L+R +++ + FM R
Sbjct: 126 AHLQ------THIGSRCEVQPLF-EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + L+++ +V+ GLGARDSL
Sbjct: 178 KLLGVDCFVSRSGYTGEDGYEISVPVNAADALARRLMAEPEVQPIGLGARDSL 230
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G GFPGA I + ++ GV+RKR G P+R G +I +
Sbjct: 250 IEASLLWAISKVRRADGARAAGFPGAEAIFAHVRDGVARKRVGLLPQERTPVREGADIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYI+ ++ + L+ VR K+V +KV+KMPFV
Sbjct: 310 ANDKPVGKVCSGGFGPTLAAPVAMGYIDSEHAALDTALFAVVRGKKVALKVSKMPFVTPR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRVKLLGVDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + L+++ +V+ GLGARDSL
Sbjct: 202 PVNAADALARRLMAEPEVQPIGLGARDSL 230
>gi|262274203|ref|ZP_06052015.1| aminomethyltransferase (glycine cleavage system T protein)
[Grimontia hollisae CIP 101886]
gi|262222013|gb|EEY73326.1| aminomethyltransferase (glycine cleavage system T protein)
[Grimontia hollisae CIP 101886]
Length = 372
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 144/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY A+ + HLH R +FDVSHM Q + G++
Sbjct: 7 KTPLHALHVEMGAKMVPFAGYEMPVQY-ALGVRKEHLHCREHAGLFDVSHMGQLRLHGEN 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L GK +LFTNEQGG+ DDL+VT D LF+V NA+ + D+
Sbjct: 66 AAKALEALVPVDIIDLPVGKQRYALFTNEQGGLMDDLMVT-NFGDHLFVVVNAACKAQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A +L D+ L+ E+R L+A+QGP ++ +L + ++ + FM +
Sbjct: 125 AHLRA------NLPADVELE--EVEDRALLALQGPKAAAVLAT-LNPAVADMVFMDAEKI 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AGI C ++R+GYTGEDG EISVP + LL E+V+ GLGARDSL
Sbjct: 176 ELAGIECLVSRSGYTGEDGYEISVPANKAEEFARRLLIKEEVEWIGLGARDSL 228
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKS-GVSRKRTGFTS-TGVPIRPGYEIF 56
+ + LL K RR GGFPGA II QI + VSRKR G + P+R G +F
Sbjct: 248 VEASLLWAISKPRRADGERAGGFPGADIILDQIATKDVSRKRVGLLGMSKAPVREGAVLF 307
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+A+D +G +TSG P+ + +AMGY+ A + +G E++ VR K++ + V KMPFV
Sbjct: 308 DADDNEIGVVTSGTFGPTTGQPVAMGYVSTANAVIGKEVFAEVRGKKLPMTVEKMPFVPQ 367
Query: 117 NYY 119
YY
Sbjct: 368 RYY 370
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L D+ L+ + E+R L+A+QGP ++ +L + ++ + FM + +AGI C ++R
Sbjct: 130 NLPADVELEEV--EDRALLALQGPKAAAVLAT-LNPAVADMVFMDAEKIELAGIECLVSR 186
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP + LL E+V+ GLGARDSL
Sbjct: 187 SGYTGEDGYEISVPANKAEEFARRLLIKEEVEWIGLGARDSL 228
>gi|171680267|ref|XP_001905079.1| hypothetical protein [Podospora anserina S mat+]
gi|170939760|emb|CAP64986.1| unnamed protein product [Podospora anserina S mat+]
Length = 484
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 148/249 (59%), Gaps = 15/249 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPLYDLHLSHGGKMVPF GF MPVQY ++ + SHL TRS S+FDVSHM+Q ++ G
Sbjct: 82 QKTPLYDLHLSHGGKMVPFGGFHMPVQYSSLGVAQSHLFTRSHASLFDVSHMVQRLILGP 141
Query: 257 HREEWLESICVADVHELDPGKGTLS--LFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
+LE I +D L+ K TLS + + +GGI DD I+TK ED ++V+NA R
Sbjct: 142 GAAAFLERITPSDCKNLETHKSTLSALMTLDGKGGISDDTIITKLAEDKFYVVTNAGCRG 201
Query: 315 VDMDLMVAAQDRFKS-LGKD-IHLQFLSAEERGLIAVQGPLSSTILQ---RHTDLDLSSL 369
D + + ++ + +G + + ++ + GL+AVQGP + ILQ +DL L
Sbjct: 202 KDNNYIDREMAKWNTEMGHEGLKVREEQLDGWGLVAVQGPKAEEILQGVLTEEGVDLKKL 261
Query: 370 YFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD--EDVKL 421
F S + P ++R GYTGE G EIS+P + + EA L+ E+++L
Sbjct: 262 LFGGSLYAKVKYGGGKVSSPLLISRGGYTGEYGFEISIPPAETVGVTEAFLAAGPEEIQL 321
Query: 422 AGLGARDSL 430
AGLGARDSL
Sbjct: 322 AGLGARDSL 330
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 9 IFPGKRRRETGGFPGASIIQSQI------KSGVSRKRTGFTSTGVPIRPGYEIFNANDQ- 61
I P +RR E G+ GA +I Q+ +GV R+R G G P R G EI + ++
Sbjct: 357 IIPKERRSENAGYYGADVIAKQLVPKSKGGAGVHRRRIGLLVEGAPAREGAEIVSRSEDG 416
Query: 62 ----RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G +TSGCPSPSL KNIAMGYI+ + KVG E+ + VR + VTKMPFV +
Sbjct: 417 KEAISLGTVTSGCPSPSLGKNIAMGYIKDGFHKVGTEVDILVRGRPRKAVVTKMPFVPTK 476
Query: 118 YY 119
Y+
Sbjct: 477 YW 478
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 470 GLIAVQGPLSSTILQ---RHTDLDLSSLYFMTSRPCTI------AGIPCTLTRAGYTGED 520
GL+AVQGP + ILQ +DL L F S + P ++R GYTGE
Sbjct: 234 GLVAVQGPKAEEILQGVLTEEGVDLKKLLFGGSLYAKVKYGGGKVSSPLLISRGGYTGEY 293
Query: 521 GVEISVPGEQCTHIVEALLSD--EDVKLAGLGARDSL 555
G EIS+P + + EA L+ E+++LAGLGARDSL
Sbjct: 294 GFEISIPPAETVGVTEAFLAAGPEEIQLAGLGARDSL 330
>gi|197336879|ref|YP_002158336.1| glycine cleavage system T protein [Vibrio fischeri MJ11]
gi|197314131|gb|ACH63580.1| glycine cleavage system T protein [Vibrio fischeri MJ11]
Length = 372
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LYD+H++ G KMVPFAG+ MPVQY + + HLHTR+ +FDVSHM Q + G++
Sbjct: 7 KTALYDIHVAAGAKMVPFAGYEMPVQY-PLGVKKEHLHTRNAAGLFDVSHMGQLRLKGQN 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ +L K + FTN+ GGI DDL+V D LF+V NA+ ++ D+
Sbjct: 66 AAAALEALVPVDIIDLPSQKQRYAFFTNDDGGIMDDLMVA-NFGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A +L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM +
Sbjct: 125 AHLAA------NLPADVEIEVI--EDRSLLALQGPQAADVLSRLQS-SVANMLFMDTAVV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI C ++R+GYTGEDG EISVP ++ + E L S E+V+ GLGARDSL
Sbjct: 176 EINGIECYVSRSGYTGEDGYEISVPNDKVAELAETLTSFEEVEWIGLGARDSL 228
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIF 56
+ + LL K RR G GFPGA +I QI++ V+RKR G T P+R G +++
Sbjct: 248 VEASLLWAISKNRRADGERAAGFPGADVILKQIETKDVNRKRVGLVGQTKAPVREGCKLY 307
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+AND +G +TSG P+ K ++M Y+ + +G E++ VR K++ + V KMPFV
Sbjct: 308 DANDNEIGIVTSGTAGPTAGKPVSMAYVRTDLASLGTEVFADVRGKKLPMTVEKMPFVPQ 367
Query: 117 NYY 119
YY
Sbjct: 368 RYY 370
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM + I GI C ++R
Sbjct: 130 NLPADVEIEVI--EDRSLLALQGPQAADVLSRLQS-SVANMLFMDTAVVEINGIECYVSR 186
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP ++ + E L S E+V+ GLGARDSL
Sbjct: 187 SGYTGEDGYEISVPNDKVAELAETLTSFEEVEWIGLGARDSL 228
>gi|119946355|ref|YP_944035.1| glycine cleavage system T protein [Psychromonas ingrahamii 37]
gi|119864959|gb|ABM04436.1| glycine cleavage system T protein [Psychromonas ingrahamii 37]
Length = 376
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 146/232 (62%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ GGKMVPFAG+ MPVQY ++ + HLH R +FDVSHM Q + G++
Sbjct: 12 TPLHALHIEMGGKMVPFAGYDMPVQY-SLGVRKEHLHCRDAAGLFDVSHMGQVRLFGENA 70
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E LE++ D+ +L GK + FTNEQGGI DDL+V L D L +V NA+ ++ D+
Sbjct: 71 AEGLEALVPVDIMDLPVGKQRYAFFTNEQGGINDDLMVG-NLGDFLLVVVNAACKQQDIA 129
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A +L D+ L+ + E+R L+A+QGP + +L + + ++++ FM +
Sbjct: 130 HLRA------NLPSDVRLEVI--EDRALLALQGPQAVEVLAK-INPAVNNMRFMDAMKIQ 180
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ C ++R+GYTGEDG EISVP Q + LL+ +V+ GLGARDSL
Sbjct: 181 LAGVECYVSRSGYTGEDGFEISVPAAQAEALARELLAFAEVEWIGLGARDSL 232
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 14 RRRET---GGFPGASIIQSQIKS-GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITS 68
RR E GGFPGA II QIKS ++RKR G T P+R G E+F+A D ++G +TS
Sbjct: 264 RRAEGSRPGGFPGADIILEQIKSKNITRKRVGLLGTSKAPVREGCELFDAADNKIGIVTS 323
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G PS +AM Y++ S++G E++ VR K++ + V KMPFV++NY+
Sbjct: 324 GTFGPSKGMPVAMAYVDVNCSQIGSEVFAEVRAKKLPMTVVKMPFVEANYF 374
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L D+ L+ + E+R L+A+QGP + +L + + ++++ FM + +AG+ C ++R
Sbjct: 134 NLPSDVRLEVI--EDRALLALQGPQAVEVLAK-INPAVNNMRFMDAMKIQLAGVECYVSR 190
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP Q + LL+ +V+ GLGARDSL
Sbjct: 191 SGYTGEDGFEISVPAAQAEALARELLAFAEVEWIGLGARDSL 232
>gi|323499244|ref|ZP_08104221.1| glycine cleavage system protein T2 [Vibrio sinaloensis DSM 21326]
gi|323315632|gb|EGA68666.1| glycine cleavage system protein T2 [Vibrio sinaloensis DSM 21326]
Length = 372
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 144/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G+
Sbjct: 7 KTPLHALHVEAGAKMVPFAGYDMPVQY-KLGVKKEHLHTRDAAGLFDVSHMGQLRLHGEG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LES+ D+ +L G + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLESLVPVDIIDLPQGNQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + A L + L+ + ++R L+A+QGP + +L+R + D++ + FM +
Sbjct: 125 NHLEA------HLPSGVELEII--DDRALLALQGPKAVDVLKRF-NADVADMLFMDVKKL 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + + L +E+V+ GLGARDSL
Sbjct: 176 EILGVECIVSRSGYTGEDGYEISVPNTHAEELAQKLTLEEEVEWIGLGARDSL 228
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ VSRKR G T P+R G E+F+A+D +VG +TSG P+
Sbjct: 268 GGFPGADIILKQIETKDVSRKRVGLVGQTKAPVREGTELFDADDNKVGVVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ VG EL+ VR K++ + V KMPFV YY
Sbjct: 328 KPVSMAYVRADLMAVGTELFAEVRGKKLPMTVEKMPFVPQRYY 370
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + +L+R + D++ + FM + I G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLALQGPKAVDVLKRF-NADVADMLFMDVKKLEILGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + L +E+V+ GLGARDSL
Sbjct: 200 PNTHAEELAQKLTLEEEVEWIGLGARDSL 228
>gi|312881451|ref|ZP_07741245.1| glycine cleavage system protein T2 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370873|gb|EFP98331.1| glycine cleavage system protein T2 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 372
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEAGAKMVPFAGYDMPVQY-KLGVKKEHLHTRDAAGLFDVSHMGQLRLHGAG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LES+ D+ +L G + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLESLVPVDIIDLPSGNQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + + L+ + ++R L+A+QGP + +L R ++ + FM +
Sbjct: 125 SHLQA------HLPQGVELEVI--DDRALLALQGPKAVDVLARFNS-SVAEMLFMDVKKL 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP E+ + + L ++E+V+ GLGARDSL
Sbjct: 176 EILGVECIVSRSGYTGEDGYEISVPNEKAEELADKLTAEEEVEWIGLGARDSL 228
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ VSRKR G T P+R G E+F++ +VG +TSG P+
Sbjct: 267 AGGFPGADIILEQIETKDVSRKRVGLVGQTKAPVREGAELFDSEGSKVGIVTSGTAGPNA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ + +G EL+ VR K++ + + KMPFV YY
Sbjct: 327 GKPVSMAYVRADLAAIGTELFADVRGKQLPMTIEKMPFVPQRYY 370
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + +L R ++ + FM + I G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLALQGPKAVDVLARFNS-SVAEMLFMDVKKLEILGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E+ + + L ++E+V+ GLGARDSL
Sbjct: 200 PNEKAEELADKLTAEEEVEWIGLGARDSL 228
>gi|254505666|ref|ZP_05117812.1| glycine cleavage system T protein [Vibrio parahaemolyticus 16]
gi|219551319|gb|EED28298.1| glycine cleavage system T protein [Vibrio parahaemolyticus 16]
Length = 372
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 145/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G+
Sbjct: 7 KTPLHSLHVEAGAKMVPFAGYDMPVQY-KLGVKKEHLHTRDAAGLFDVSHMGQLRLHGEG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LES+ D+ +L G + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLESLVPVDIIDLPAGNQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + A L + L+ + ++R L+A+QGP + +L+R + +++ + FM +
Sbjct: 125 NHLEA------HLPSGVELEVI--DDRALLALQGPKAVDVLKRF-NAEVADMLFMDVKKL 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + + L ++E+V+ GLGARDSL
Sbjct: 176 EILGVECIVSRSGYTGEDGYEISVPNTHAQELAQKLTAEEEVEWIGLGARDSL 228
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ V+RKR G T P+R G E+F+A+D +VG +TSG P+
Sbjct: 268 GGFPGADIILKQIETKDVTRKRVGLVGQTKAPVREGTELFDADDNKVGVVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ VG EL+ VR K++ + V KMPFV YY
Sbjct: 328 KPVSMAYVRADLMAVGTELFAEVRGKKLPMTVEKMPFVPQRYY 370
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + +L+R + +++ + FM + I G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLALQGPKAVDVLKRF-NAEVADMLFMDVKKLEILGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + L ++E+V+ GLGARDSL
Sbjct: 200 PNTHAQELAQKLTAEEEVEWIGLGARDSL 228
>gi|424030631|ref|ZP_17770113.1| glycine cleavage system T protein [Vibrio cholerae HENC-01]
gi|408881779|gb|EKM20642.1| glycine cleavage system T protein [Vibrio cholerae HENC-01]
Length = 372
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L+ + ++R L+A+QGP ++ +L R +++ + FM R
Sbjct: 125 AHLQA------HLPSGVELEII--DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + L +E+V+ GLGARDSL
Sbjct: 176 ELLGVECIVSRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSL 228
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V+RKR G T P+R G E+++A+ ++G +TSG P+
Sbjct: 267 AGGFPGADIILKQIETKDVARKRIGLVGQTKAPVREGAELYDADGNKIGVVTSGTAGPNA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 327 GKPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKVELLGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L +E+V+ GLGARDSL
Sbjct: 200 PADKAEELARKLTGEEEVEWIGLGARDSL 228
>gi|424039532|ref|ZP_17777888.1| glycine cleavage system T protein [Vibrio cholerae HENC-02]
gi|408892880|gb|EKM30240.1| glycine cleavage system T protein [Vibrio cholerae HENC-02]
Length = 372
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L+ + ++R L+A+QGP ++ +L R +++ + FM R
Sbjct: 125 AHLQA------HLPSGVELEII--DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + L +E+V+ GLGARDSL
Sbjct: 176 ELLGVECIVSRSGYTGEDGYEISVPADKAEELARELTGEEEVEWIGLGARDSL 228
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V+RKR G T P+R G E+++A+ ++G +TSG P+
Sbjct: 267 AGGFPGADIILKQIETKDVARKRIGLVGQTKAPVREGAELYDADGNKIGVVTSGTAGPNA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 327 GKPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKVELLGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L +E+V+ GLGARDSL
Sbjct: 200 PADKAEELARELTGEEEVEWIGLGARDSL 228
>gi|89076036|ref|ZP_01162399.1| glycine cleavage system protein T2 [Photobacterium sp. SKA34]
gi|89048271|gb|EAR53852.1| glycine cleavage system protein T2 [Photobacterium sp. SKA34]
Length = 372
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 145/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQYG + + H+H R +FDVSHM Q + G+H
Sbjct: 7 QTPLHGLHIEMGAKMVPFAGYDMPVQYG-LGVKKEHIHCRDSAGLFDVSHMGQVRLKGQH 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ +L GK ++FTNE GGI+DDL+VT D LFLV NA+ ++ D+
Sbjct: 66 AATLLETLVPVDILDLPVGKQRYAVFTNENGGIEDDLMVT-NFGDHLFLVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L+ + E+R L+A+QGP ++ +L + +S + FM +
Sbjct: 125 AHLKA------HLKDGVELEVI--EDRALLALQGPKAAMVLAE-LNPTVSDMVFMDAAKM 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ + C ++R+GYTGEDG EISVP ++ + ALL+ +V+ GLGARDSL
Sbjct: 176 TLLDVECYVSRSGYTGEDGYEISVPNDKAEELARALLAFNEVEWIGLGARDSL 228
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R RE GGFPGA II Q+++ V RKR G + P+R G ++F+A D +
Sbjct: 256 ITPSRRAGGVRE-GGFPGADIILEQLQTKQVLRKRVGLVGQSKAPVREGTKLFDAEDNEI 314
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ +AMGYI +K+G ++ VR K++ + + KMPFV YY
Sbjct: 315 GIVTSGTFGPTKGIPVAMGYIATEANKLGETVYAEVRGKKLPMTIEKMPFVPQRYY 370
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L + +S + FM + T+ + C ++R+GYTGEDG EISV
Sbjct: 141 EDRALLALQGPKAAMVLAE-LNPTVSDMVFMDAAKMTLLDVECYVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + ALL+ +V+ GLGARDSL
Sbjct: 200 PNDKAEELARALLAFNEVEWIGLGARDSL 228
>gi|431801001|ref|YP_007227904.1| glycine cleavage system T protein [Pseudomonas putida HB3267]
gi|430791766|gb|AGA71961.1| glycine cleavage system T protein [Pseudomonas putida HB3267]
Length = 373
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q + G
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQITLRGSD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V +D+LFLV NA+ + D+
Sbjct: 66 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLFLVVNAACKDQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A +G +Q L E+R L+A+QGP + +L+R +++ + FM RP
Sbjct: 126 AHLQA------HIGSRCEVQPLF-EQRALLALQGPAAVKVLERLAP-EVAGMTFMQFRPV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 178 KLLGEDCFVSRSGYTGEDGYEISVPVHAAEALARRLLAEPEVQPIGLGARDSL 230
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR G GFPGA I + + GV KR G P+R G +I +
Sbjct: 250 VEASLLWAISKVRRADGARAAGFPGAEAIFAHQREGVPSKRVGLLPQERTPVREGADIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYI+ ++ + L+ VR K+V +KV+KMPFV
Sbjct: 310 ANDKPVGKVCSGGFGPTLGAPVAMGYIDSEHTAIDTPLFALVRGKKVALKVSKMPFVAQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + +L+R +++ + FM RP + G C ++R+GYTGEDG EISV
Sbjct: 143 EQRALLALQGPAAVKVLERLAP-EVAGMTFMQFRPVKLLGEDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V+ GLGARDSL
Sbjct: 202 PVHAAEALARRLLAEPEVQPIGLGARDSL 230
>gi|424043608|ref|ZP_17781231.1| glycine cleavage system T protein [Vibrio cholerae HENC-03]
gi|408888137|gb|EKM26598.1| glycine cleavage system T protein [Vibrio cholerae HENC-03]
Length = 372
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 142/233 (60%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L I L+ + ++R L+A+QGP ++ +L R +++ + FM R
Sbjct: 125 AHLQA------HLPSGIELEII--DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 176 ELLGVECIVSRSGYTGEDGYEISVPADKAEELARKLTGQEEVEWIGLGARDSL 228
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 267 AGGFPGADIILKQIETKDVARKRIGLVGQTKAPVREGAELFDADGNKIGVVTSGTAGPNA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 327 GKPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKVELLGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L E+V+ GLGARDSL
Sbjct: 200 PADKAEELARKLTGQEEVEWIGLGARDSL 228
>gi|343499698|ref|ZP_08737648.1| glycine cleavage system protein T2 [Vibrio tubiashii ATCC 19109]
gi|418476719|ref|ZP_13045869.1| glycine cleavage system protein T2 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342822419|gb|EGU57146.1| glycine cleavage system protein T2 [Vibrio tubiashii ATCC 19109]
gi|384575583|gb|EIF06020.1| glycine cleavage system protein T2 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 372
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 144/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G+
Sbjct: 7 KTPLHALHVEAGAKMVPFAGYDMPVQY-KLGVKKEHLHTRDAAGLFDVSHMGQLRLHGEG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LES+ D+ +L G + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLESLVPVDIVDLPQGNQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + A L + L+ + ++R L+A+QGP + +L+R + +++ + FM +
Sbjct: 125 NHLEA------HLPSGVELEII--DDRALLALQGPKAVDVLKRF-NAEVADMLFMDVKKL 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + + L +E+V+ GLGARDSL
Sbjct: 176 EILGVECIVSRSGYTGEDGYEISVPNSHAQELAQKLTGEEEVEWIGLGARDSL 228
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ VSRKR G T P+R G E+F+A D +VG +TSG P+
Sbjct: 268 GGFPGADIILKQIETKDVSRKRVGLVGQTKAPVREGAELFDAEDNKVGVVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ + +G EL+ VR K++ + + KMPFV YY
Sbjct: 328 KPVSMAYVRADLAAIGTELFADVRGKKLPMTIEKMPFVPQRYY 370
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + +L+R + +++ + FM + I G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLALQGPKAVDVLKRF-NAEVADMLFMDVKKLEILGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + L +E+V+ GLGARDSL
Sbjct: 200 PNSHAQELAQKLTGEEEVEWIGLGARDSL 228
>gi|167032006|ref|YP_001667237.1| glycine cleavage system T protein [Pseudomonas putida GB-1]
gi|166858494|gb|ABY96901.1| glycine cleavage system T protein [Pseudomonas putida GB-1]
Length = 373
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 144/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q ++ G
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIILRGAD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V +D+LFLV NA+ + D+
Sbjct: 66 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLFLVVNAACKDQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ +G +Q L E+R L+A+QGP + +L+R +++ + FM RP
Sbjct: 126 AHLQT------HIGGRCEVQPLF-EQRALLALQGPAAVKVLERLAP-EVAGMTFMQFRPV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + + LL++ +V+ GLGARDSL
Sbjct: 178 KLLGEDCFVSRSGYTGEDGYEISVPVQGAEALARRLLAEPEVQPIGLGARDSL 230
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G GFPGA I + + GV+RKR G P+R G +I +
Sbjct: 250 IEASLLWAISKVRRAEGARAAGFPGAEAIFAHQREGVARKRVGLLPQERTPVREGADIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYIE ++ + L+ VR K+V +KV+KMPFV
Sbjct: 310 ANDKPVGKVCSGGFGPTLGAPVAMGYIESEHAALDTPLFAVVRGKKVALKVSKMPFVAQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + +L+R +++ + FM RP + G C ++R+GYTGEDG EISV
Sbjct: 143 EQRALLALQGPAAVKVLERLAP-EVAGMTFMQFRPVKLLGEDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL++ +V+ GLGARDSL
Sbjct: 202 PVQGAEALARRLLAEPEVQPIGLGARDSL 230
>gi|395496714|ref|ZP_10428293.1| glycine cleavage system T protein [Pseudomonas sp. PAMC 25886]
Length = 374
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q +TG
Sbjct: 8 KTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHLHTREQAGLFDVSHMGQIRLTGAG 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G ++ L EER L+A+QGP + ++L R ++ + FM P
Sbjct: 127 -----AHLR-QHIGDQCTIEPLF-EERALLALQGPAAVSVLARLAP-EVKHMTFMQFAPT 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAASAEALARSLLAETEVQAIGLGARDSL 231
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVSRKR G P+R G EI +
Sbjct: 251 IEASLLWAISKARRADGARAGGFPGADAIFTQQQTGVSRKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG PSL +AMGY++ A+ + ++ VR K+V ++V+KMPFV
Sbjct: 311 EHGTVIGSVCSGGFGPSLGGPLAMGYLDSAFIALDTKVSALVRGKKVPLRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + ++L R ++ + FM P + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVSVLARLAP-EVKHMTFMQFAPTRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAASAEALARSLLAETEVQAIGLGARDSL 231
>gi|144898463|emb|CAM75327.1| Glycine cleavage T protein (aminomethyl transferase)
[Magnetospirillum gryphiswaldense MSR-1]
Length = 370
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 141/240 (58%), Gaps = 10/240 (4%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S SA TPL LH G KMVPFAG++MPVQY + + HLHTR+ +FDVSHM Q
Sbjct: 2 SDDSALLTTPLDALHRELGAKMVPFAGYAMPVQY-PLGVLGEHLHTRAGAGLFDVSHMGQ 60
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ G + LES+ D+ L G+ S+FTN+QGGI DDL+++K ED LFLV NA
Sbjct: 61 ITIEGDNVATLLESLVPGDIQGLGLGRTRYSVFTNDQGGILDDLMISKLAEDKLFLVVNA 120
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ + D + ++L L L ++R L+A+QGP ++T++ R +
Sbjct: 121 ACKDADFAHLS------RALSGKAKLSQL--DDRALLALQGPQAATVMARLAP-GAETQG 171
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM+ R IA IPC +TR+GYTGEDG EISV + LL+ +VK GLGARDSL
Sbjct: 172 FMSIREYPIADIPCLVTRSGYTGEDGYEISVANVDAEKLARTLLAQPEVKPIGLGARDSL 231
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQ 61
+ R+ GKRRRE GGFPGA+IIQ Q+ G R R G G P R EI + +
Sbjct: 251 VEGRIAWIIGKRRREQGGFPGAAIIQKQLTEGAPRLRVGIKPVGRAPARAHTEITDVDGT 310
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G ITSG PS +AMGY+ ++ G+ + + VR K ++ V +PFV +YY
Sbjct: 311 PLGEITSGGFGPSADGPVAMGYVPRGFAVPGMPVKLIVRGKALEAHVALLPFVPHSYY 368
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++T++ R + FM+ R IA IPC +TR+GYTGEDG EISV
Sbjct: 144 DDRALLALQGPQAATVMARLAP-GAETQGFMSIREYPIADIPCLVTRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ LL+ +VK GLGARDSL
Sbjct: 203 ANVDAEKLARTLLAQPEVKPIGLGARDSL 231
>gi|398870536|ref|ZP_10625859.1| glycine cleavage system T protein [Pseudomonas sp. GM74]
gi|398208053|gb|EJM94793.1| glycine cleavage system T protein [Pseudomonas sp. GM74]
Length = 374
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 146/239 (61%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ EL G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIELPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G ++ L EER L+A+QGP + T L R T +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGDQCTIEPLF-EERALLALQGPAAVTALARLTP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++++V+ GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAETLARALLAEQEVEAIGLGARDSL 231
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV+RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVNRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGDIIGSVCSGGFGPTLGGPLAMGYVDSAYIALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T L R T +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTALARLTP-EVAKMTFMQFARVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++++V+ GLGARDSL
Sbjct: 203 PAANAETLARALLAEQEVEAIGLGARDSL 231
>gi|238014916|gb|ACR38493.1| unknown [Zea mays]
Length = 357
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 136/221 (61%), Gaps = 5/221 (2%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPFAG+SMP+QY SI S ++ R+ S+FDV+HM + G+ +LES+ VADV
Sbjct: 1 MVPFAGWSMPIQY-RDSIMDSTVNCRANGSLFDVAHMCGLSLKGRGAIPFLESLVVADVA 59
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG 331
L G GTL++FTNEQGG DD ++ K + ++LV NA R D+ + A + F G
Sbjct: 60 ALRDGTGTLTVFTNEQGGAIDDSVIAKVTDHHIYLVVNAGCRDKDLAHIEAHMEAFNKKG 119
Query: 332 KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 391
D+ ++R L+A+QGPL++ LQ T DLS +YF + I G C LTR GY
Sbjct: 120 GDVKWHI--HDDRSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGYACFLTRTGY 177
Query: 392 TGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
TGEDG EISVP E + EA+L S+ V+L GLGARDSL
Sbjct: 178 TGEDGFEISVPSENAVDLAEAILERSEGKVRLTGLGARDSL 218
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 68/110 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q++ G +R G + G P R E+ + + +R+G +TSG
Sbjct: 247 GKRRRAEGGFLGADVILKQLQEGPKIRRVGMVTQGPPARSHSELVSGSGERIGEVTSGGF 306
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G EL V VR K D VTKMPFV + YY P
Sbjct: 307 SPCLKKNIAMGYVKSGMHKAGTELKVVVRGKSYDAVVTKMPFVPTKYYKP 356
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ F G D+ ++R L+A+QGPL++ LQ T DLS +YF + I G C
Sbjct: 113 EAFNKKGGDVKWHI--HDDRSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGYAC 170
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
LTR GYTGEDG EISVP E + EA+L S+ V+L GLGARDSL
Sbjct: 171 FLTRTGYTGEDGFEISVPSENAVDLAEAILERSEGKVRLTGLGARDSL 218
>gi|323492271|ref|ZP_08097429.1| glycine cleavage system protein T2 [Vibrio brasiliensis LMG 20546]
gi|323313584|gb|EGA66690.1| glycine cleavage system protein T2 [Vibrio brasiliensis LMG 20546]
Length = 372
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G+
Sbjct: 7 KTPLHALHVEAGAKMVPFAGYDMPVQY-KLGVKKEHLHTRDAAGLFDVSHMGQLRLHGEG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LES+ D+ +L G + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLESLVPVDIIDLASGNQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + A L + L+ + ++R L+A+QGP + +L+R +++ + FM +
Sbjct: 125 NHLEA------HLPSGVELEII--DDRALLAIQGPKAVDVLKRFNP-EVADMLFMDVKKL 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + + L +E+V+ GLGARDSL
Sbjct: 176 DILGVECIVSRSGYTGEDGYEISVPNTHAEELAQKLTGEEEVEWIGLGARDSL 228
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI+S VSRKR G T P+R G E+F+A D +VG +TSG P+
Sbjct: 268 GGFPGADIILKQIESKDVSRKRVGLVGQTKAPVREGAELFDAEDNKVGVVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ + +G EL+ VR K++ + V KMPFV YY
Sbjct: 328 KPVSMAYVRADLAAIGTELFADVRGKKLPMTVEKMPFVPQRYY 370
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + +L+R +++ + FM + I G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLAIQGPKAVDVLKRFNP-EVADMLFMDVKKLDILGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + L +E+V+ GLGARDSL
Sbjct: 200 PNTHAEELAQKLTGEEEVEWIGLGARDSL 228
>gi|261250782|ref|ZP_05943356.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417954014|ref|ZP_12597055.1| glycine cleavage system protein T2 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260937655|gb|EEX93643.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342816282|gb|EGU51184.1| glycine cleavage system protein T2 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 372
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 145/233 (62%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G+
Sbjct: 7 KTPLHALHVEAGAKMVPFAGYDMPVQY-KLGVKKEHLHTRDAAGLFDVSHMGQLRLHGEG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LES+ D+ +L G + FTNE+GGI DDL+V L+D LF+V NA+ ++ D+
Sbjct: 66 AAAFLESLVPVDIIDLPKGNQRYAFFTNEEGGIMDDLMVA-NLDDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + A L + L+ + ++R L+A+QGP + +L+R + ++ + FM +
Sbjct: 125 NHLEA------HLPSGVELEII--DDRALLALQGPKAVDVLKRF-NAQVADMVFMDVKKL 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + + L S+++V+ GLGARDSL
Sbjct: 176 NILGVECIVSRSGYTGEDGYEISVPNSHAEELAQKLTSEKEVEWIGLGARDSL 228
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II Q+++ VSRKR G T P+R G E+F+A+D ++G +TSG P+
Sbjct: 268 GGFPGADIILKQLETKDVSRKRVGLVGQTKAPVREGAELFDADDNKIGVVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ + +G E++ VR K++ + V KMPFV Y+
Sbjct: 328 KPVSMAYVRADLAAIGTEVYADVRGKKLAMTVEKMPFVPQRYF 370
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + +L+R + ++ + FM + I G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLALQGPKAVDVLKRF-NAQVADMVFMDVKKLNILGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + L S+++V+ GLGARDSL
Sbjct: 200 PNSHAEELAQKLTSEKEVEWIGLGARDSL 228
>gi|417948815|ref|ZP_12591957.1| glycine cleavage system T protein [Vibrio splendidus ATCC 33789]
gi|342809178|gb|EGU44302.1| glycine cleavage system T protein [Vibrio splendidus ATCC 33789]
Length = 377
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G++
Sbjct: 12 KTPLHSLHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRGAAGLFDVSHMGQLRLHGEN 70
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ + D+
Sbjct: 71 AAAVLESLVPVDIIDLPAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKTQDI 129
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
D + A L D+ ++ + ++R L+A+QGP ++ +L R ++ + FM +
Sbjct: 130 DHLTA------HLPADVEMEVI--DDRALLALQGPKAAEVLARFQP-SVADMLFMDVQKV 180
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + + L ++ +V+ GLGARDSL
Sbjct: 181 DVDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTAEAEVEWIGLGARDSL 233
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI + V RKR G T P+R G E+F+A +VG +TSG P+
Sbjct: 272 AGGFPGADIILEQIATKDVQRKRVGLVGQTKAPVREGAELFDAEGNKVGVVTSGTAGPNA 331
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ + +G E++ VR K++ + V KMPFV YY
Sbjct: 332 GKPVSMAYVRTDLAAIGTEVFAEVRGKKLPMTVEKMPFVPQRYY 375
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + ++R L+A+QGP ++ +L R ++ + FM + + G+ C ++R+
Sbjct: 136 LPADVEMEVI--DDRALLALQGPKAAEVLARFQP-SVADMLFMDVQKVDVDGVECIVSRS 192
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP + + L ++ +V+ GLGARDSL
Sbjct: 193 GYTGEDGYEISVPNDHAEALARKLTAEAEVEWIGLGARDSL 233
>gi|125591691|gb|EAZ32041.1| hypothetical protein OsJ_16220 [Oryza sativa Japonica Group]
Length = 357
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 137/221 (61%), Gaps = 5/221 (2%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPFAG+SMP+QY +I S L R+ S+FDVSHM + G+ +LES+ VADV
Sbjct: 1 MVPFAGWSMPIQY-KDTIMDSTLKCRANGSLFDVSHMCGLSLHGRQAIPFLESLVVADVA 59
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG 331
L G GTL++FTN++GG DD +VTK + ++LV NA R D+ + + F G
Sbjct: 60 ALKDGTGTLTVFTNDRGGAIDDSVVTKVTDQHIYLVVNAGCRDKDLAHIGEHMEAFNKKG 119
Query: 332 KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 391
D+ ++ +ER L+A+QGPL++ LQ T DLS +YF + I G C LTR GY
Sbjct: 120 GDV--KWHVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGYACFLTRTGY 177
Query: 392 TGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
TGEDG EISVP E + +ALL S+ V+L GLGARDSL
Sbjct: 178 TGEDGFEISVPSENAVDLAKALLEKSEGKVRLTGLGARDSL 218
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRR+ GGF GA +I Q++ G +R G S G P R EI + + + +G +TSG
Sbjct: 247 GKRRKAEGGFLGADVILKQLQEGPKIRRVGLLSQGPPPRSHSEIVSNSGENIGEVTSGGF 306
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G E V VR K D VTKMPFV + YY P
Sbjct: 307 SPCLKKNIAMGYVKSGLHKAGTEFKVVVRGKSYDAVVTKMPFVPTKYYKP 356
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
+ F G D+ ++ +ER L+A+QGPL++ LQ T DLS +YF + I G C
Sbjct: 113 EAFNKKGGDV--KWHVHDERSLLALQGPLAAPTLQLLTKEDLSKMYFSDFKMIDINGYAC 170
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
LTR GYTGEDG EISVP E + +ALL S+ V+L GLGARDSL
Sbjct: 171 FLTRTGYTGEDGFEISVPSENAVDLAKALLEKSEGKVRLTGLGARDSL 218
>gi|444375766|ref|ZP_21175019.1| Aminomethyltransferase (glycine cleavage system T protein)
[Enterovibrio sp. AK16]
gi|443680269|gb|ELT86916.1| Aminomethyltransferase (glycine cleavage system T protein)
[Enterovibrio sp. AK16]
Length = 372
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 147/233 (63%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+H R +FDVSHM Q + G++
Sbjct: 7 KTPLHALHIEMGAKMVPFAGYDMPVQY-ALGVRKEHIHCREHAGLFDVSHMGQLRLHGEN 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L GK +L TNEQGG+ DDL+VT D LF+V NA+ ++ D+
Sbjct: 66 AAKALEALVPVDIIDLPEGKQRYALLTNEQGGLMDDLMVT-NFGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A ++ D+ L+ + E+R L+A+QGP ++T+L + ++ + FM +
Sbjct: 125 AHLRA------NIPADVELEVI--EDRALLALQGPEAATVLAT-LNPAVADMVFMDAAKM 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AGI C ++R+GYTGEDG EISVP ++ LL E+V+ GLGARDSL
Sbjct: 176 DLAGIECLVSRSGYTGEDGYEISVPADKAEEFARRLLLKEEVEWIGLGARDSL 228
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI + VSRKR G S+ P+R G +F+A+D +G +TSG P+
Sbjct: 267 AGGFPGADIILDQIATKDVSRKRVGLLGSSKAPVREGAVLFDADDNEIGVVTSGTFGPTK 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +AMGY+ A + +G E++ VR K++ + V KMPFV YY
Sbjct: 327 GQPVAMGYVATASAAIGTEVFAEVRGKKLPMTVEKMPFVPQRYY 370
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
D+ L+ + E+R L+A+QGP ++T+L + ++ + FM + +AGI C ++R+GYT
Sbjct: 134 DVELEVI--EDRALLALQGPEAATVLAT-LNPAVADMVFMDAAKMDLAGIECLVSRSGYT 190
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISVP ++ LL E+V+ GLGARDSL
Sbjct: 191 GEDGYEISVPADKAEEFARRLLLKEEVEWIGLGARDSL 228
>gi|407781942|ref|ZP_11129158.1| glycine cleavage system T protein [Oceanibaculum indicum P24]
gi|407206981|gb|EKE76925.1| glycine cleavage system T protein [Oceanibaculum indicum P24]
Length = 368
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 140/232 (60%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH GGKMV FAG+ MPVQY A I A HLHTR K +FDVSHM Q ++G+
Sbjct: 9 TPLNALHRELGGKMVEFAGYEMPVQYPA-GIMAEHLHTRDKAGLFDVSHMGQVKLSGEGA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++ LE++ ++ L PG+ +LFTNEQGGI DDL+VT+ D LFLV NA+ + D++
Sbjct: 68 DKALETLVPGEIQALKPGRQRYTLFTNEQGGILDDLMVTR-FNDHLFLVVNAACKTQDIE 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
M A L + L+ + ER L+A+QGP +S ++ R L FM
Sbjct: 127 HMRA------HLPSGVTLEVMF--ERALMALQGPAASAVMAR-LGPAACELTFMGGARVE 177
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI CT+TR+GYTGEDG EISV ++ + LL +V GLGARDSL
Sbjct: 178 IRGIWCTVTRSGYTGEDGFEISVDEDKADKLARLLLDQPEVMPIGLGARDSL 229
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGC 70
GKRRRE GGFPGA II Q+K+G +RKR G G P R E+ +A +R+G ITSG
Sbjct: 258 GKRRREEGGFPGADIIFDQLKNGTARKRVGIRPEGRAPAREHTELTDAEGRRIGEITSGG 317
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PS+ +AMGY+E A++ G ++ VR K + KV MPF Y+
Sbjct: 318 FGPSVGGPVAMGYVETAFASEGTDINAMVRGKALPAKVASMPFTPHRYH 366
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGP +S ++ R L FM I GI CT+TR+GYTGEDG EISV
Sbjct: 143 ERALMALQGPAASAVMAR-LGPAACELTFMGGARVEIRGIWCTVTRSGYTGEDGFEISVD 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL +V GLGARDSL
Sbjct: 202 EDKADKLARLLLDQPEVMPIGLGARDSL 229
>gi|148975471|ref|ZP_01812342.1| glycine cleavage system T protein [Vibrionales bacterium SWAT-3]
gi|145964899|gb|EDK30150.1| glycine cleavage system T protein [Vibrionales bacterium SWAT-3]
Length = 377
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 142/233 (60%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G++
Sbjct: 12 KTPLHALHVEVGAKMVPFAGYEMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLHGEN 70
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ + D+
Sbjct: 71 AAAVLESLVPVDIIDLPSGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKTQDI 129
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
D + A L D+ ++ + ++R L+A+QGP +S +L R ++ + FM +
Sbjct: 130 DHLTA------HLPADVEMEVI--DDRALLALQGPKASEVLARFQP-SVADMLFMDVQKV 180
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + + L + +V+ GLGARDSL
Sbjct: 181 DIDGVECIVSRSGYTGEDGYEISVPNDHAEALARKLTVEAEVEWIGLGARDSL 233
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI + V RKR G T P+R G E+F+A +VG +TSG P+
Sbjct: 272 AGGFPGADIILEQIATKDVQRKRVGLVGQTKAPVREGAELFDAEGNKVGVVTSGTAGPNA 331
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ + +G E++ VR K++ + V KMPFV YY
Sbjct: 332 GKPVSMAYVRTDLAAIGTEVFAEVRGKKLPMTVEKMPFVPQRYY 375
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + ++R L+A+QGP +S +L R ++ + FM + I G+ C ++R+
Sbjct: 136 LPADVEMEVI--DDRALLALQGPKASEVLARFQP-SVADMLFMDVQKVDIDGVECIVSRS 192
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP + + L + +V+ GLGARDSL
Sbjct: 193 GYTGEDGYEISVPNDHAEALARKLTVEAEVEWIGLGARDSL 233
>gi|23014343|ref|ZP_00054164.1| COG0404: Glycine cleavage system T protein (aminomethyltransferase)
[Magnetospirillum magnetotacticum MS-1]
Length = 371
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE 259
PL LH G KMVPFAG++MPVQY A + A HLHTRS ++FDVSHM Q + G
Sbjct: 12 PLDALHRELGAKMVPFAGYAMPVQYPA-GVLAEHLHTRSAAALFDVSHMGQAEIKGARAV 70
Query: 260 EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDL 319
E LES+ D+ L GK S+FTN+ GGI DDL+++K ED LFLV NA+ + D
Sbjct: 71 ELLESLVPGDIRALGLGKTRYSVFTNDHGGILDDLMISKLAEDHLFLVINAACKHADFAH 130
Query: 320 MVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 379
+ A L + L+ + E+R L+A+QGP ++ + + ++ FMT T+
Sbjct: 131 LKA------HLEGKVELRMI--EDRSLLALQGPGAAAAMATLCP-EAGAMTFMTIAEVTV 181
Query: 380 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
AGI C TR+GYTGEDG EISV + A+L+ V AGLGARDSL
Sbjct: 182 AGIKCLATRSGYTGEDGWEISVANADAEKLARAILAAPGVMPAGLGARDSL 232
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR GGFPGA++IQ Q+ G R G G P R EI + R+G I SG
Sbjct: 262 KRRRAEGGFPGAAVIQKQLAEGAPTLRVGIQPDGKAPARAHTEITDEAGNRLGEICSGGF 321
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PS +AMGY+ A++ +G +L + VR K +D V +PFV Y+
Sbjct: 322 GPSAGGPVAMGYVPAAFAGIGTKLKLVVRGKAMDAHVAALPFVPHRYF 369
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ + + ++ FMT T+AGI C TR+GYTGEDG EISV
Sbjct: 145 EDRSLLALQGPGAAAAMATLCP-EAGAMTFMTIAEVTVAGIKCLATRSGYTGEDGWEISV 203
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ A+L+ V AGLGARDSL
Sbjct: 204 ANADAEKLARAILAAPGVMPAGLGARDSL 232
>gi|423698932|ref|ZP_17673422.1| aminomethyltransferase [Pseudomonas fluorescens Q8r1-96]
gi|387996181|gb|EIK57511.1| aminomethyltransferase [Pseudomonas fluorescens Q8r1-96]
Length = 374
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGAGAAKALETLVPVDIIDLPVGMQRYAMFTNENGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + A +G ++ L E R L+A+QGP + T+L R D++ + F
Sbjct: 121 CKDQDLAHLRA------HIGAQCSIEALF-EARALLALQGPAAVTVLARLAP-DVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + T+ G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFQRVTLLGVDCFVSRSGYTGEDGFEISVPAADAEKLARALLAEPEVAAIGLGARDSL 231
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q + GV RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAETVFAQQQGGVKRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G + SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGTVCSGGFGPTLGGPLAMGYLDSAYVALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + T+L R D++ + FM + T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EARALLALQGPAAVTVLARLAP-DVAKMTFMQFQRVTLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAADAEKLARALLAEPEVAAIGLGARDSL 231
>gi|307941647|ref|ZP_07657002.1| glycine cleavage system T protein [Roseibium sp. TrichSKD4]
gi|307775255|gb|EFO34461.1| glycine cleavage system T protein [Roseibium sp. TrichSKD4]
Length = 383
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 148/240 (61%), Gaps = 17/240 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL DLH+ G +MV FAGFSMPVQY I HLHTR +FDVSHM Q + G
Sbjct: 12 QTPLNDLHVELGARMVSFAGFSMPVQY-PTGIMTEHLHTREHAGLFDVSHMGQAWLIGPD 70
Query: 258 RE---EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTL----EDSLFLVSNA 310
E LE++C +++ EL PG+ ++ NE GGI DDL+VT+ L + LF+V NA
Sbjct: 71 HETTARALEALCPSNMVELKPGRQRYTVLLNEDGGIVDDLMVTRPLAAERDGQLFIVVNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
SR+ VD L+ +D+ L ++ L+ + E+R LIA+QGP + ++ H + L
Sbjct: 131 SRKDVDYALL---RDK---LPDNVRLELV--EDRALIALQGPEAVAVVASHAPA-AAELG 181
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM + + GI C ++R+GYTGEDGVE+SVP I +ALL+DE VK GLGARDSL
Sbjct: 182 FMDADFMELDGIDCHISRSGYTGEDGVEMSVPAGAAEAIAKALLADERVKPIGLGARDSL 241
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPGA+ IQ ++ G SR R GF G P R G EI + +G +TSG
Sbjct: 271 KRRREEGGFPGAAHIQKELAEGPSRVRVGFKLDGKAPAREGAEIRLPDGTVIGTVTSGGF 330
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
+P++ IAMGY++ A+S++G ++ + VR++ + +V MPFV+ YY PK
Sbjct: 331 APTMGAPIAMGYVDAAHSELGTKVNLVVRNRELPAQVAAMPFVQQRYYRKPK 382
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L ++ L+ + E+R LIA+QGP + ++ H + L FM + + GI C ++R+
Sbjct: 144 LPDNVRLELV--EDRALIALQGPEAVAVVASHAPA-AAELGFMDADFMELDGIDCHISRS 200
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDGVE+SVP I +ALL+DE VK GLGARDSL
Sbjct: 201 GYTGEDGVEMSVPAGAAEAIAKALLADERVKPIGLGARDSL 241
>gi|255940606|ref|XP_002561072.1| Pc16g07470 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585695|emb|CAP93417.1| Pc16g07470 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 483
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 150/261 (57%), Gaps = 21/261 (8%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS +T LYDLH+ HG KMVPFAGF MP+QY +S SH+ TR K S+FDVSHM+Q
Sbjct: 74 SSSEPLSKTQLYDLHVEHGAKMVPFAGFDMPLQYADLSHVESHMWTREKASLFDVSHMVQ 133
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSN 309
++G + L+ + + V +L P +LS E GG+ DD ++T+ ED+ + V+N
Sbjct: 134 HQLSGPGAIDLLKKVTPSSVDKLAPNTSSLSCLLEEGTGGMIDDCVITRRGEDTFYFVTN 193
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HT----- 362
A RR D+ + A D ++S L++ +R L+A+QGPL++++LQ HT
Sbjct: 194 AGRRTEDLAFLTAEIDAYRSKHGADSLKWEILADRALVALQGPLAASVLQPLIHTANTPA 253
Query: 363 -DLDLSSLYFMTSRPC-------TIAGIPCTLTRAGYTGEDGVEISVPGEQC----THIV 410
+ DLS+LYF T R + P ++R GYTGEDG EIS+P +
Sbjct: 254 SETDLSTLYFGTCRELYLTLPDGSATAHPLLISRTGYTGEDGFEISIPTSGAPSLPRQVT 313
Query: 411 EALLSDED-VKLAGLGARDSL 430
E LL+D +LAGL ARDSL
Sbjct: 314 ELLLADSSKSRLAGLAARDSL 334
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 12 GKRRRE--TGGFPGASIIQSQIKS--GVSRKRTGFT-STGVPIRPGYEIFN----ANDQR 62
G+ RR+ T F GAS+I Q+ S + ++R G + G P R G + + AN
Sbjct: 363 GRDRRDPATATFNGASVILPQLASPKSIPQRRVGLSVEKGPPAREGAVVVDISDPANPVD 422
Query: 63 VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
VG +TSG PSPSL NIAM Y++ G EL V+VR+K V MP+V S +Y P
Sbjct: 423 VGVVTSGLPSPSLGGANIAMAYVKQGLHTKGTELAVKVRNKVRKATVVGMPWVPSKFYRP 482
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 20/126 (15%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HT------DLDLSSLYFMTSRP 501
D ++S L++ +R L+A+QGPL++++LQ HT + DLS+LYF T R
Sbjct: 209 DAYRSKHGADSLKWEILADRALVALQGPLAASVLQPLIHTANTPASETDLSTLYFGTCRE 268
Query: 502 C-------TIAGIPCTLTRAGYTGEDGVEISVPGEQC----THIVEALLSDED-VKLAGL 549
+ P ++R GYTGEDG EIS+P + E LL+D +LAGL
Sbjct: 269 LYLTLPDGSATAHPLLISRTGYTGEDGFEISIPTSGAPSLPRQVTELLLADSSKSRLAGL 328
Query: 550 GARDSL 555
ARDSL
Sbjct: 329 AARDSL 334
>gi|209809288|ref|YP_002264826.1| glycine cleavage system T protein [Aliivibrio salmonicida LFI1238]
gi|208010850|emb|CAQ81250.1| glycine cleavage system T protein [Aliivibrio salmonicida LFI1238]
Length = 372
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 144/234 (61%), Gaps = 11/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+T L+D+H++ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 6 NKTALFDMHVAAGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDSAGLFDVSHMGQLRLKGD 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LE++ D+ +L K + FTNE+GGI DDL+V D LF+V NA+ ++ D
Sbjct: 65 GAAAALEALVPVDIIDLPSQKQRYAFFTNEEGGIMDDLMVA-NFGDHLFVVVNAACKEQD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A L KD+ L+ + E+R L+A+QGP ++ +L R ++++ FM S
Sbjct: 124 IAHLQA------HLPKDVELEVI--EDRALLALQGPKAADVLSRLQPA-VANMLFMDSIT 174
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI C ++R+GYTGEDG E+SVP ++ + E L S E+V+ GLGARDSL
Sbjct: 175 IDINGIECYVSRSGYTGEDGYEVSVPNDKAAELAETLTSFEEVEWIGLGARDSL 228
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIF 56
+ + LL K RR GGFPGA II QI++ V+RKR G T P+R G ++F
Sbjct: 248 VEASLLWGISKNRRADGERAGGFPGADIILKQIETKDVNRKRVGLVGQTKAPVREGCKLF 307
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+AND +G ITSG P+ K ++MGY+ + +G E++ VR K++ + V KMPFV
Sbjct: 308 DANDTEIGVITSGTAGPTAGKPVSMGYLRTDLAVIGTEVFAEVRGKKLAMTVEKMPFVPQ 367
Query: 117 NYY 119
YY
Sbjct: 368 RYY 370
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L KD+ L+ + E+R L+A+QGP ++ +L R ++++ FM S I GI C ++R+
Sbjct: 131 LPKDVELEVI--EDRALLALQGPKAADVLSRLQPA-VANMLFMDSITIDINGIECYVSRS 187
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG E+SVP ++ + E L S E+V+ GLGARDSL
Sbjct: 188 GYTGEDGYEVSVPNDKAAELAETLTSFEEVEWIGLGARDSL 228
>gi|386010646|ref|YP_005928923.1| protein GcvT [Pseudomonas putida BIRD-1]
gi|313497352|gb|ADR58718.1| GcvT [Pseudomonas putida BIRD-1]
Length = 373
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 144/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q ++ G
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIILRGAD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V +D+LFLV NA+ + D+
Sbjct: 66 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLFLVVNAACKDQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + +G +Q L EER L+A+QGP + +L+R +++ + FM R
Sbjct: 126 AHLQS------HIGNRCEVQPLF-EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ + C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 178 TLLEVDCFVSRSGYTGEDGYEISVPVNAADALARRLLAEPEVQPIGLGARDSL 230
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G GFPGA I +Q + GV+RKR G P+R G +I +
Sbjct: 250 IEASLLWAISKVRRADGARAAGFPGAEAIFTQQRDGVARKRVGLLPQERTPVREGADIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYI+ +S + L+ VR K+V +KV+KMPFV
Sbjct: 310 ANDKPVGKVCSGGFGPTLGAPVAMGYIDSEHSALDTPLFAVVRGKKVALKVSKMPFVTPR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R +++ + FM R T+ + C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVKVLERLAP-EVAGMTFMQFRRVTLLEVDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V+ GLGARDSL
Sbjct: 202 PVNAADALARRLLAEPEVQPIGLGARDSL 230
>gi|302680791|ref|XP_003030077.1| hypothetical protein SCHCODRAFT_68948 [Schizophyllum commune H4-8]
gi|300103768|gb|EFI95174.1| hypothetical protein SCHCODRAFT_68948 [Schizophyllum commune H4-8]
Length = 392
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 138/237 (58%), Gaps = 3/237 (1%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD HL +G KMVPFAG+SMP++Y V ASH H R +FDV HM+Q+ G
Sbjct: 16 RKTGLYDFHLQNGAKMVPFAGYSMPLEYAGVGQVASHKHVREAAGLFDVGHMVQSNFRGP 75
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE I + + L P TLS+ NE GGI DD ++TK +D+ ++V+NA RR+ D
Sbjct: 76 TATAFLEWITPSSLSALSPYTSTLSVLLNEAGGIIDDTVITKHSQDAFYVVTNAGRRERD 135
Query: 317 MDLMVA--AQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
+ A+ + K+ ++ E GL+A+QGP ++ LQ T DL +L F S
Sbjct: 136 LAWFKEKLAEWNAGEVAKEGPVEHEVLEGWGLLALQGPEAAGYLQTLTSFDLRTLTFGKS 195
Query: 375 RPCTI-AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G + R GYTGEDG EIS+P +Q + + L ++V+L GLGARDSL
Sbjct: 196 AFVPIDGGFNLHVARGGYTGEDGFEISIPPDQTYDVAQLLSKPDNVQLTGLGARDSL 252
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNA--NDQRVGAITSG 69
GK R++TGGF G + I+ G R+R G G P R G +I + + +G +TSG
Sbjct: 281 GKERKKTGGFIGTEGVLKHIQEGPPRRRVGLIVEGAPARHGAQILESPTMSEAIGVVTSG 340
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGY++ K G EL V VR K +T MPFV + YY
Sbjct: 341 IPSPTLGKNIAMGYVKNGLHKKGTELAVAVRGKARKAVITPMPFVPTKYY 390
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI-AGIPCTLTRAGYTGEDGVEIS 525
E GL+A+QGP ++ LQ T DL +L F S I G + R GYTGEDG EIS
Sbjct: 163 EGWGLLALQGPEAAGYLQTLTSFDLRTLTFGKSAFVPIDGGFNLHVARGGYTGEDGFEIS 222
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+P +Q + + L ++V+L GLGARDSL
Sbjct: 223 IPPDQTYDVAQLLSKPDNVQLTGLGARDSL 252
>gi|395795410|ref|ZP_10474716.1| glycine cleavage system T protein [Pseudomonas sp. Ag1]
gi|421144155|ref|ZP_15604074.1| Glycine cleavage system T protein [Pseudomonas fluorescens BBc6R8]
gi|395340363|gb|EJF72198.1| glycine cleavage system T protein [Pseudomonas sp. Ag1]
gi|404504640|gb|EKA18691.1| Glycine cleavage system T protein [Pseudomonas fluorescens BBc6R8]
Length = 374
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q +TG
Sbjct: 8 KTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHLHTREQAGLFDVSHMGQIRLTGAG 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNEQGGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G ++ L EER L+A+QGP + ++L R ++ + FM P
Sbjct: 127 -----AHLR-QHIGDQCTIEPLF-EERALLALQGPAAVSVLARLAP-EVKHMTFMQFAPT 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAANAEALARSLLAETEVQAIGLGARDSL 231
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVSRKR G P+R G EI +
Sbjct: 251 IEASLLWAISKARRADGARAGGFPGADAIFTQQQTGVSRKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG PSL +AMGY++ A+ + E+ VR K+V ++V+KMPFV
Sbjct: 311 EHGTVIGSVCSGGFGPSLGGPLAMGYLDSAFIALDTEVSALVRGKKVPLRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + ++L R ++ + FM P + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVSVLARLAP-EVKHMTFMQFAPTRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAANAEALARSLLAETEVQAIGLGARDSL 231
>gi|339485944|ref|YP_004700472.1| glycine cleavage system T protein [Pseudomonas putida S16]
gi|338836787|gb|AEJ11592.1| glycine cleavage system T protein [Pseudomonas putida S16]
Length = 373
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q + G
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQITLRGTD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V +D+LFLV NA+ + D+
Sbjct: 66 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLFLVVNAACKDQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A +G +Q L E+R L+A+QGP + +L+R +++ + FM RP
Sbjct: 126 AHLQA------HIGSRCEVQPLF-EQRALLALQGPSAVKVLERLAP-EVAGMTFMQFRPV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 178 KLLGEDCFVSRSGYTGEDGYEISVPVHAAEALARRLLAEPEVQPIGLGARDSL 230
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR G GFPGA I + + GVSRKR G P+R G +I +
Sbjct: 250 VEASLLWAISKVRRADGARAAGFPGAEAIFAHQREGVSRKRVGLLPQERTPVREGADIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYI+ ++ + L+ VR K+V +KV+KMPFV
Sbjct: 310 ANDKPVGKVCSGGFGPTLGAPVAMGYIDSEHTAIDTPLFAVVRGKKVALKVSKMPFVAQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + +L+R +++ + FM RP + G C ++R+GYTGEDG EISV
Sbjct: 143 EQRALLALQGPSAVKVLERLAP-EVAGMTFMQFRPVKLLGEDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V+ GLGARDSL
Sbjct: 202 PVHAAEALARRLLAEPEVQPIGLGARDSL 230
>gi|345567035|gb|EGX49973.1| hypothetical protein AOL_s00076g614 [Arthrobotrys oligospora ATCC
24927]
Length = 480
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 145/246 (58%), Gaps = 16/246 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLYDLH+ + GKMV F G +MPVQY I SH + R +FDVSHM+Q TG
Sbjct: 71 KTPLYDLHVRYDGKMVEFGGHAMPVQYADQGIGESHRYVREACGLFDVSHMVQHQFTGPT 130
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LESI +D+ L+P TLS+ GGI DD I+TK E++ ++V+NA R D+
Sbjct: 131 AAAFLESITPSDLKSLEPFSSTLSVLLLPTGGIVDDTIITKHDENAFYVVTNAGCRDKDL 190
Query: 318 DLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQ---RHTDLDL-SSLY 370
+ + + G+ + L+ RGL+A+QGP +S +LQ + D L S+L+
Sbjct: 191 AFLSEKLKEWNAQAGEGEQVRHDVLA---RGLVALQGPEASKVLQSLLKPEDEALDSTLF 247
Query: 371 FMTSRPCTIA----GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED--VKLAGL 424
F S+ TI +P + R GYTGEDG EIS+P EQ +VEA+L ED KLAGL
Sbjct: 248 FGQSKFATITVDGEDVPIHIARGGYTGEDGFEISIPAEQTELVVEAMLDAEDCVTKLAGL 307
Query: 425 GARDSL 430
GARDSL
Sbjct: 308 GARDSL 313
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 68/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
K RR+ FPGAS I QIK G S++R G G P R G I A+ +++G ITSGCP
Sbjct: 342 AKSRRKDASFPGASTILKQIKEGPSKRRIGLIVNGAPAREGAIIKTADGEKIGVITSGCP 401
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L KNIAMGY+E Y KVG E+ V VR K + KMPFV + Y+
Sbjct: 402 SPTLGKNIAMGYVEEKYKKVGTEVVVEVRGKPRQAVIAKMPFVPAKYH 449
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 10/97 (10%)
Query: 469 RGLIAVQGPLSSTILQ---RHTDLDL-SSLYFMTSRPCTIA----GIPCTLTRAGYTGED 520
RGL+A+QGP +S +LQ + D L S+L+F S+ TI +P + R GYTGED
Sbjct: 217 RGLVALQGPEASKVLQSLLKPEDEALDSTLFFGQSKFATITVDGEDVPIHIARGGYTGED 276
Query: 521 GVEISVPGEQCTHIVEALLSDED--VKLAGLGARDSL 555
G EIS+P EQ +VEA+L ED KLAGLGARDSL
Sbjct: 277 GFEISIPAEQTELVVEAMLDAEDCVTKLAGLGARDSL 313
>gi|269966653|ref|ZP_06180732.1| aminomethyltransferase [Vibrio alginolyticus 40B]
gi|269828720|gb|EEZ82975.1| aminomethyltransferase [Vibrio alginolyticus 40B]
Length = 376
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 11 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 69
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L+ GK + FTNE+GGI DDL+V L D LF+V NA+ + D+
Sbjct: 70 AAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVA-NLGDHLFVVVNAACKAQDI 128
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L+ + E+R L+A+QGP ++ +L R ++S + FM R
Sbjct: 129 AHLQA------HLPSGVELE--TIEDRALLAIQGPKAAAVLVRFAP-EVSEMLFMDIRKV 179
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L ++++V+ GLGARDSL
Sbjct: 180 DILGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEDEVEWIGLGARDSL 232
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 272 GGFPGADIILKQIETKDVARKRVGLVGQTKAPVREGVELFDADGVKIGVVTSGTAGPNAG 331
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G E++ VR K + + V KMPFV YY
Sbjct: 332 KPVSMGYVRADLAAIGTEVFAEVRGKMLPMTVEKMPFVPQRYY 374
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L R ++S + FM R I G C ++R+GYTGEDG EISV
Sbjct: 145 EDRALLAIQGPKAAAVLVRFAP-EVSEMLFMDIRKVDILGAECIVSRSGYTGEDGYEISV 203
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L ++++V+ GLGARDSL
Sbjct: 204 PADKAEELARKLTAEDEVEWIGLGARDSL 232
>gi|70995372|ref|XP_752443.1| glycine cleavage system T protein [Aspergillus fumigatus Af293]
gi|66850078|gb|EAL90405.1| glycine cleavage system T protein [Aspergillus fumigatus Af293]
gi|159131198|gb|EDP56311.1| glycine cleavage system T protein [Aspergillus fumigatus A1163]
Length = 485
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 147/256 (57%), Gaps = 22/256 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH++ G KMVPFAG+SMP+QY +S SH TR K SVFDVSHM+Q ++G
Sbjct: 80 KKTQLYDLHIARGAKMVPFAGYSMPLQYSDLSHVESHHWTREKASVFDVSHMVQHHLSGP 139
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
E L + + + +L P TLS E GGI DD ++T+ D+ + V+NA RR
Sbjct: 140 GAMELLMKVTPSSLDKLKPNSSTLSCLLEEGTGGIVDDTVITRLDGDAFYFVTNAGRRTE 199
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ---------RHTDLDL 366
D+ + A + ++ +++ +R L+A+QGPL++++LQ D DL
Sbjct: 200 DLAFLQAEIEAYRQTHGADSIKWEILADRALVALQGPLAASVLQPLISSHGAASPADTDL 259
Query: 367 SSLYFMTSRPC-------TIAGIPCTLTRAGYTGEDGVEISVPGEQC----THIVEALLS 415
S+LYF R T P ++R GYTGEDG EIS+P C T + E LLS
Sbjct: 260 STLYFGNCRSLHLTLPDGTPTPQPLLISRTGYTGEDGFEISIPTGGCPSLPTQVTELLLS 319
Query: 416 D-EDVKLAGLGARDSL 430
+ E V+LAGL ARDSL
Sbjct: 320 NPEQVRLAGLAARDSL 335
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 70/120 (58%), Gaps = 10/120 (8%)
Query: 12 GKRRRE--TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQ---R 62
GK RR+ T F GA+ I Q+ S +S++R GFT G P R G + + D+ +
Sbjct: 364 GKDRRDPATANFNGAATILPQLASPAKTLSQRRVGFTVEKGSPAREGAIVVDLGDESHPQ 423
Query: 63 VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+G ITSG PSPSL NIAMGYI+ K G E+ V VR+K VT MP+V+S +Y P
Sbjct: 424 IGVITSGLPSPSLGGTNIAMGYIKNGMHKKGTEVGVLVRNKVRKATVTGMPWVESKFYRP 483
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 21/109 (19%)
Query: 468 ERGLIAVQGPLSSTILQ---------RHTDLDLSSLYFMTSRPC-------TIAGIPCTL 511
+R L+A+QGPL++++LQ D DLS+LYF R T P +
Sbjct: 227 DRALVALQGPLAASVLQPLISSHGAASPADTDLSTLYFGNCRSLHLTLPDGTPTPQPLLI 286
Query: 512 TRAGYTGEDGVEISVPGEQC----THIVEALLSD-EDVKLAGLGARDSL 555
+R GYTGEDG EIS+P C T + E LLS+ E V+LAGL ARDSL
Sbjct: 287 SRTGYTGEDGFEISIPTGGCPSLPTQVTELLLSNPEQVRLAGLAARDSL 335
>gi|421528984|ref|ZP_15975535.1| glycine cleavage system T protein [Pseudomonas putida S11]
gi|402213621|gb|EJT84967.1| glycine cleavage system T protein [Pseudomonas putida S11]
Length = 840
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 142/232 (61%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q + G
Sbjct: 475 TPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQITLRGSDA 533
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LES+ D+ +L G ++FTNEQGGI DDL+V +D+LFLV NA+ + D+
Sbjct: 534 AKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGDDTLFLVVNAACKDQDLA 593
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A +G +Q L E+R L+A+QGP + +L+R +++ + FM RP
Sbjct: 594 HLQA------HIGSRCEVQPLF-EQRALLALQGPAAVKVLERLAP-EVAGMTFMQFRPVK 645
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 646 LLGEDCFVSRSGYTGEDGYEISVPVHAAEALARRLLAEPEVQPIGLGARDSL 697
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR G GFPGA I + + GV+RKR G P+R G +I +
Sbjct: 717 VEASLLWAISKVRRADGARAAGFPGAEAIFAHQRDGVARKRVGLLPQERTPVREGADIVD 776
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AND+ VG + SG P+L +AMGYI+ ++ + L+ VR K+V +KV+KMPFV
Sbjct: 777 ANDKPVGKVCSGGFGPTLGAPVAMGYIDSEHTAIDTPLFAVVRGKKVALKVSKMPFVAQR 836
Query: 118 YY 119
YY
Sbjct: 837 YY 838
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + +L+R +++ + FM RP + G C ++R+GYTGEDG EISV
Sbjct: 610 EQRALLALQGPAAVKVLERLAP-EVAGMTFMQFRPVKLLGEDCFVSRSGYTGEDGYEISV 668
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V+ GLGARDSL
Sbjct: 669 PVHAAEALARRLLAEPEVQPIGLGARDSL 697
>gi|269963351|ref|ZP_06177681.1| aminomethyltransferase [Vibrio harveyi 1DA3]
gi|269831925|gb|EEZ86054.1| aminomethyltransferase [Vibrio harveyi 1DA3]
Length = 376
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 142/233 (60%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 11 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 69
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L GK + FTNEQGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 70 AAAFLETLVPVDIVDLGAGKQRYAFFTNEQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 128
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L I L+ + ++R L+A+QGP ++ +L R +++ + FM R
Sbjct: 129 AHLQA------HLPSGIELEII--DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKV 179
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP ++ + L +E+V+ GLGARDSL
Sbjct: 180 ELLGGECIVSRSGYTGEDGYEISVPADKAEELARKLTGEEEVEWIGLGARDSL 232
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 271 AGGFPGADIILKQIETKDVARKRIGLVGQTKAPVREGAELFDADGNKIGVVTSGTAGPNA 330
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 331 GKPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 374
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R +++ + FM R + G C ++R+GYTGEDG EISV
Sbjct: 145 DDRALLAIQGPKAAEVLARFAP-EVAEMLFMDVRKVELLGGECIVSRSGYTGEDGYEISV 203
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L +E+V+ GLGARDSL
Sbjct: 204 PADKAEELARKLTGEEEVEWIGLGARDSL 232
>gi|294896047|ref|XP_002775377.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
gi|239881569|gb|EER07193.1| aminomethyltransferase, putative [Perkinsus marinus ATCC 50983]
Length = 1131
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 142/236 (60%), Gaps = 8/236 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD H++ GGKMV FAG+SMPVQY I S LHTR+ S+FDVSHM Q V GK
Sbjct: 27 RRTALYDFHIAQGGKMVDFAGWSMPVQYKDTGIITSCLHTRADASLFDVSHMGQLRVYGK 86
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R ++ES+ V D+ L PG+G L+L T Q I DD ++ D L++V NAS + D
Sbjct: 87 DRVRFMESLTVGDLQILKPGEGRLTLITTPQSTIIDDTVICNE-GDHLYVVLNASNTEKD 145
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M + A F D+ L+ E LIA+QGP + +LQ DL+ + FM S
Sbjct: 146 MKHIETALADFDG---DVSLE--PHPEASLIALQGPKAMEVLQPMLAEDLTKVPFMVSFA 200
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVP-GEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+P T+TR GYTGEDG E+S+P E I E ++ +E V AGLGARD+L
Sbjct: 201 ATVNGVPNVTVTRCGYTGEDGFELSIPTSEGVNAIAEKMIENEAVLPAGLGARDTL 256
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISV 526
E LIA+QGP + +LQ DL+ + FM S T+ G+P T+TR GYTGEDG E+S+
Sbjct: 167 EASLIALQGPKAMEVLQPMLAEDLTKVPFMVSFAATVNGVPNVTVTRCGYTGEDGFELSI 226
Query: 527 P-GEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E I E ++ +E V AGLGARD+L
Sbjct: 227 PTSEGVNAIAEKMIENEAVLPAGLGARDTL 256
>gi|389738131|gb|EIM79335.1| glycine cleavage system T protein [Stereum hirsutum FP-91666 SS1]
Length = 411
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 141/243 (58%), Gaps = 4/243 (1%)
Query: 191 SSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
++P+ + RT LY H+ +G KMVPFAG+SMP+ YGAV SH H R + +FDV HM+
Sbjct: 31 ATPAGQLSRTGLYYFHVENGAKMVPFAGYSMPLSYGAVGQVDSHNHVRERAGLFDVGHMV 90
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
Q+ GK +LE + + + L P TLS+ NE+GGI DD I+TK ED+ ++V+N
Sbjct: 91 QSNFRGKTALAFLEWLTPSSLTSLAPYSSTLSVLLNERGGIIDDTIITKHAEDAFYVVTN 150
Query: 310 ASRRKVDMDLMVAAQDRFKS--LGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLS 367
A RR D+ A + + + K ++ E GL+A+QGP ++ LQ T +L
Sbjct: 151 AGRRAEDLAWFKAKLEGWNNSERAKAGAVEHEVLEGWGLLALQGPEAAAYLQTLTSFNLQ 210
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
SL F S + G + R GYTGEDG EIS+P + + LLS + V L GLGAR
Sbjct: 211 SLTFGRSAFVPLEGFNLHVARGGYTGEDGFEISIPPAHTVEVAQ-LLSKDPVWLTGLGAR 269
Query: 428 DSL 430
DSL
Sbjct: 270 DSL 272
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
GK RRE F GA + +K G R+R G G P R +IF N + +G +TSG
Sbjct: 301 GKDRREDPTFIGAEGVMKHLKDGPPRRRVGLIVDGAPARTHAKIFAPENAEVIGEVTSGI 360
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGY++ K G E+ V VR K+ + MPFVKS Y+
Sbjct: 361 PSPTLGKNIAMGYVKSGMHKKGTEVNVEVRGKKRSAVIAPMPFVKSRYF 409
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E GL+A+QGP ++ LQ T +L SL F S + G + R GYTGEDG EIS+
Sbjct: 185 EGWGLLALQGPEAAAYLQTLTSFNLQSLTFGRSAFVPLEGFNLHVARGGYTGEDGFEISI 244
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LLS + V L GLGARDSL
Sbjct: 245 PPAHTVEVAQ-LLSKDPVWLTGLGARDSL 272
>gi|401888205|gb|EJT52168.1| aminomethyltransferase, precursor [Trichosporon asahii var. asahii
CBS 2479]
Length = 412
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 146/243 (60%), Gaps = 3/243 (1%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+P+ + TPLYD ++S GGKMVPFAGFSMP+ YG V +H H RS +FDVSHMLQ
Sbjct: 29 STPAFAEETPLYDFNVSRGGKMVPFAGFSMPLSYGDVGQVTAHKHVRSDAGLFDVSHMLQ 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ +G +LES+ + L +L++ N++GGI DD I+T+ + ++V+NA
Sbjct: 89 HIFSGPGATAFLESLTPTALSALPEHGSSLTVLLNDEGGIIDDSIMTRHPNGAWYVVTNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + ++++ D +++ + + GL+A+QGP ++ LQ+ TD DLS+L
Sbjct: 149 GRIDEDVAHIKKELEKWEKDHPDQKVEWKTLDGYGLVALQGPKAAEELQKLTDYDLSTLK 208
Query: 371 FMTSRPCTIA--GIPCTLTRAGYTGEDGVE-ISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
F S + + C + R GYTGEDG E IS+P E + E + + V+L GLGAR
Sbjct: 209 FGQSTYANVGKDKVRCHIARGGYTGEDGFEQISIPPEAAVALTEEITALPSVELIGLGAR 268
Query: 428 DSL 430
DSL
Sbjct: 269 DSL 271
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
K RR GG G+ I ++K G +R+R G G P R G +IF+ +G +TSG PS
Sbjct: 301 KDRRTPGGMKGSDRILRELKEGPARRRVGLEIKGSPAREGSKIFDTEGNEIGVVTSGIPS 360
Query: 73 PSL----KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P+L NIAMGY++ K G L V VR K D V MPFV + YY
Sbjct: 361 PTLGTNIATNIAMGYVKNGSHKKGTPLKVEVRKKLRDATVRPMPFVPAKYY 411
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA--GIPCTLTRAG 515
D +++ + + GL+A+QGP ++ LQ+ TD DLS+L F S + + C + R G
Sbjct: 171 DQKVEWKTLDGYGLVALQGPKAAEELQKLTDYDLSTLKFGQSTYANVGKDKVRCHIARGG 230
Query: 516 YTGEDGVE-ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
YTGEDG E IS+P E + E + + V+L GLGARDSL
Sbjct: 231 YTGEDGFEQISIPPEAAVALTEEITALPSVELIGLGARDSL 271
>gi|375263201|ref|YP_005025431.1| glycine cleavage system protein T2 [Vibrio sp. EJY3]
gi|369843628|gb|AEX24456.1| glycine cleavage system protein T2 [Vibrio sp. EJY3]
Length = 372
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G+
Sbjct: 7 KTPLHALHIEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGEG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L G + FTNEQGGI DDL+V D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIIDLPQGNQRYAFFTNEQGGIMDDLMVANQ-GDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L D+ L+ + E+R L+A+QGP ++ +L+R + +++ + FM +
Sbjct: 125 AHLKA------HLPADVELEII--EDRALLALQGPKAAEVLKRF-NAEVADMLFMDVKKL 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + L ++ +V+ GLGARDSL
Sbjct: 176 EILGVECIVSRSGYTGEDGYEISVPNSHAEELARKLTAEAEVEWIGLGARDSL 228
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 268 GGFPGADIILKQIETKDVARKRVGLVGQTKAPVREGAELFDADGNQIGVVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G EL+ VR K + + V KMPFV YY
Sbjct: 328 KPVSMGYVRADLAAIGTELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ L+ + E+R L+A+QGP ++ +L+R + +++ + FM + I G+ C ++R+
Sbjct: 131 LPADVELEII--EDRALLALQGPKAAEVLKRF-NAEVADMLFMDVKKLEILGVECIVSRS 187
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP + L ++ +V+ GLGARDSL
Sbjct: 188 GYTGEDGYEISVPNSHAEELARKLTAEAEVEWIGLGARDSL 228
>gi|330811373|ref|YP_004355835.1| aminomethyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379481|gb|AEA70831.1| Aminomethyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 374
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGAGAAKALETLVPVDIIDLPVGMQRYAMFTNENGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + A +G ++ L E R L+A+QGP + T+L R D++ + F
Sbjct: 121 CKDQDLAHLRA------HIGAQCSIEPLF-EARALLALQGPAAVTVLARLAP-DVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + T+ G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFQRVTLLGVDCFVSRSGYTGEDGFEISVPAADAEKLARALLAEPEVAAIGLGARDSL 231
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q + GV RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAETVFAQQQGGVKRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G + SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGTVCSGGFGPTLGGPLAMGYLDSAYVALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + T+L R D++ + FM + T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EARALLALQGPAAVTVLARLAP-DVAKMTFMQFQRVTLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAADAEKLARALLAEPEVAAIGLGARDSL 231
>gi|409394544|ref|ZP_11245720.1| glycine cleavage system T protein [Pseudomonas sp. Chol1]
gi|409397255|ref|ZP_11248185.1| glycine cleavage system T protein [Pseudomonas sp. Chol1]
gi|409118240|gb|EKM94642.1| glycine cleavage system T protein [Pseudomonas sp. Chol1]
gi|409120780|gb|EKM97117.1| glycine cleavage system T protein [Pseudomonas sp. Chol1]
Length = 371
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 140/234 (59%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ LHL G KMVPFAG+ MPVQY + + HLH R + +FDVSHM Q ++ G
Sbjct: 4 EKTPLHALHLELGAKMVPFAGYDMPVQY-PLGVLKEHLHCREQAGLFDVSHMGQILLHGP 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LES+ D+ +L G +LFT+E GGI DDL+V D LFLV NA+ ++ D
Sbjct: 63 QAAAALESLVPVDIIDLPVGMQRYALFTDENGGILDDLMVANLGNDRLFLVVNAACKEQD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + K +G ++ L E R L+A+QGP + +L R D++ + FM
Sbjct: 123 LTHL------RKHIGDRCEIESLF-ESRALLALQGPRAVDVLARLAP-DVTKMTFMNFAR 174
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AGI C ++R+GYTGEDG EISVP + ALL++ +V+ GLGARDSL
Sbjct: 175 VAVAGIDCYVSRSGYTGEDGFEISVPAVAAEQLARALLAEPEVQPIGLGARDSL 228
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q + GV KR G +P+R G EI +
Sbjct: 248 IDASLLWAISKVRRADGARAGGFPGAERIFAQQRDGVPSKRVGLLPQDRMPVREGAEIVD 307
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +G +TSG PSL +AMGY+ +++ + E+W VR KRV +KV+K PFV
Sbjct: 308 ADGSPIGQVTSGGFGPSLGAPLAMGYVASSHAALDSEVWAVVRGKRVPMKVSKTPFVPQR 367
Query: 118 YY 119
YY
Sbjct: 368 YY 369
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + +L R D++ + FM +AGI C ++R+GYTGEDG EISV
Sbjct: 141 ESRALLALQGPRAVDVLARLAP-DVTKMTFMNFARVAVAGIDCYVSRSGYTGEDGFEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V+ GLGARDSL
Sbjct: 200 PAVAAEQLARALLAEPEVQPIGLGARDSL 228
>gi|406695400|gb|EKC98706.1| aminomethyltransferase [Trichosporon asahii var. asahii CBS 8904]
Length = 408
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 146/243 (60%), Gaps = 3/243 (1%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+P+ + TPLYD ++S GGKMVPFAGFSMP+ YG V +H H RS +FDVSHMLQ
Sbjct: 29 STPAFAEETPLYDFNVSRGGKMVPFAGFSMPLSYGDVGQVTAHKHVRSDAGLFDVSHMLQ 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ +G +LES+ + L +L++ N++GGI DD I+T+ + ++V+NA
Sbjct: 89 HIFSGPGATAFLESLTPTALSALPEHGSSLTVLLNDEGGIIDDSIMTRHPNGAWYVVTNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + ++++ D +++ + + GL+A+QGP ++ LQ+ TD DLS+L
Sbjct: 149 GRIDEDVAHIKKELEKWEKDHPDQKVEWKTLDGYGLVALQGPKAAEELQKLTDYDLSTLK 208
Query: 371 FMTSRPCTIA--GIPCTLTRAGYTGEDGVE-ISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
F S + + C + R GYTGEDG E IS+P E + E + + V+L GLGAR
Sbjct: 209 FGQSTYANVGKDKVRCHIARGGYTGEDGFEQISIPPEAAVPLTEEITALPSVELIGLGAR 268
Query: 428 DSL 430
DSL
Sbjct: 269 DSL 271
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 60/107 (56%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
K RR GG G+ I ++K G +R+R G G P R G +IF+ +G +TSG PS
Sbjct: 301 KDRRTPGGMKGSDRILRELKEGPARRRVGLEIKGSPAREGSKIFDTEGNEIGVVTSGIPS 360
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P+L NIAMGY++ K G L V VR K D V MPFV + YY
Sbjct: 361 PTLGTNIAMGYVKNGSHKKGTPLKVEVRKKLRDATVRPMPFVPAKYY 407
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA--GIPCTLTRAG 515
D +++ + + GL+A+QGP ++ LQ+ TD DLS+L F S + + C + R G
Sbjct: 171 DQKVEWKTLDGYGLVALQGPKAAEELQKLTDYDLSTLKFGQSTYANVGKDKVRCHIARGG 230
Query: 516 YTGEDGVE-ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
YTGEDG E IS+P E + E + + V+L GLGARDSL
Sbjct: 231 YTGEDGFEQISIPPEAAVPLTEEITALPSVELIGLGARDSL 271
>gi|358372872|dbj|GAA89473.1| glycine cleavage system T protein [Aspergillus kawachii IFO 4308]
Length = 482
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 154/263 (58%), Gaps = 19/263 (7%)
Query: 187 FSPGSSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDV 245
++ ++PS ++T LYDLHL+ G KMVPFAG+SMP+QY +S SH TR K S+FDV
Sbjct: 71 YASSAAPSGPVKKTQLYDLHLARGAKMVPFAGYSMPLQYSDLSHVESHKWTREKASLFDV 130
Query: 246 SHMLQTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSL 304
SHM+Q ++G + L + + + +L+ + TLS L + GGI DD ++T+ +DS
Sbjct: 131 SHMVQHQLSGPGALDLLMKVTPSSLDKLNHNQSTLSCLLEDGTGGIVDDTVITRRTDDSF 190
Query: 305 FLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR---- 360
+ V+NA RR D+ + A D +K L++ E+R L+A+QGP ++++LQ
Sbjct: 191 YFVTNAGRRTEDLAFLQAEIDTYKQAHGPDSLKWEILEDRALVALQGPKAASVLQSLVTP 250
Query: 361 -HTDLDLSSLYFMTSRPC-------TIAGIPCTLTRAGYTGEDGVEISVPGEQ----CTH 408
+ DLS+LYF R T P ++R GYTGEDG EIS+P H
Sbjct: 251 DGANSDLSTLYFGNCRELHLTFPDGTTTPQPLLVSRTGYTGEDGFEISIPTASDATLPAH 310
Query: 409 IVEALLSDED-VKLAGLGARDSL 430
+ E LS+ D V+LAGL ARDSL
Sbjct: 311 VTELFLSNPDEVRLAGLAARDSL 333
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 12 GKRRRE--TGGFPGASIIQSQIKS--GVSRKRTGFT-STGVPIRPGYEIFNANDQ---RV 63
GK RR+ T F GAS I Q+ S +S++R GFT G P R G I + ND+ ++
Sbjct: 362 GKERRDPATANFNGASTILPQVASPKTLSQRRVGFTVEKGSPAREGAIIVDLNDESRTQI 421
Query: 64 GAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
G ITSG PSP+L NIAMGYI+ K G E+ V VR+K VT MP+V+S +Y P
Sbjct: 422 GVITSGLPSPTLGGTNIAMGYIKNGLHKKGTEVGVLVRNKLRKATVTGMPWVESKFYRP 480
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR-----HTDLDLSSLYFMTS 499
L+ D +K L++ E+R L+A+QGP ++++LQ + DLS+LYF
Sbjct: 206 LQAEIDTYKQAHGPDSLKWEILEDRALVALQGPKAASVLQSLVTPDGANSDLSTLYFGNC 265
Query: 500 RPC-------TIAGIPCTLTRAGYTGEDGVEISVPGEQ----CTHIVEALLSDED-VKLA 547
R T P ++R GYTGEDG EIS+P H+ E LS+ D V+LA
Sbjct: 266 RELHLTFPDGTTTPQPLLVSRTGYTGEDGFEISIPTASDATLPAHVTELFLSNPDEVRLA 325
Query: 548 GLGARDSL 555
GL ARDSL
Sbjct: 326 GLAARDSL 333
>gi|330448086|ref|ZP_08311734.1| glycine cleavage system T protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492277|dbj|GAA06231.1| glycine cleavage system T protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 372
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 11/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+H R +FDVSHM Q + G
Sbjct: 6 KQTPLHGLHIEMGAKMVPFAGYDMPVQY-ALGVKKEHIHCRDAAGLFDVSHMGQLRLKGD 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LES+ D+ +L GK +LFTN++GGI+DDL+VT D LFLV NA+ ++ D
Sbjct: 65 KAAAFLESLVPVDIIDLPVGKQRYALFTNDKGGIEDDLMVT-NFGDHLFLVVNAACKEQD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A +L + L+ + E+R L+A+QGP ++ +L + ++ + FM +
Sbjct: 124 IAHLKA------NLADGVELEVI--EDRALLALQGPKAAAVLAE-LNPAVADMVFMDAAH 174
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ LL+ DV+ GLGARDSL
Sbjct: 175 IELMGVECYISRSGYTGEDGYEISVPSDKAEAFARQLLAFNDVEWIGLGARDSL 228
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKSGVS-RKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI + + RKR G + P+R G ++F+A+D +G +TSG P+
Sbjct: 268 GGFPGAEIILDQITNKQALRKRIGLVGQSKAPVREGTKLFDADDNEIGIVTSGTFGPTKG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGYI +++G ++ VR K++ + + KMPFV YY
Sbjct: 328 IPVAMGYIAAEANQLGDMVYAEVRGKKLPMTIEKMPFVPQRYY 370
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L + L+ + E+R L+A+QGP ++ +L + ++ + FM + + G+ C ++R
Sbjct: 130 NLADGVELEVI--EDRALLALQGPKAAAVLAE-LNPAVADMVFMDAAHIELMGVECYISR 186
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP ++ LL+ DV+ GLGARDSL
Sbjct: 187 SGYTGEDGYEISVPSDKAEAFARQLLAFNDVEWIGLGARDSL 228
>gi|365880394|ref|ZP_09419767.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. ORS 375]
gi|365291557|emb|CCD92298.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. ORS 375]
Length = 384
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 144/239 (60%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY LH+S GGKMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q + K
Sbjct: 13 KRTPLYALHVSLGGKMVPFAGYEMPVQY-APGVLKEHLHTRAAAGLFDVSHMGQVALVPK 71
Query: 257 HRE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+ LE + D+ + G+ + FTN QGGI DDL+V + L LV NA+
Sbjct: 72 SGKVADAAAALERLVPQDIVGIPAGRQRYAQFTNAQGGILDDLMVAN-FGEHLVLVVNAA 130
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
++ D L+ L +Q L+ +R L+A+QGP ++++L + D ++ F
Sbjct: 131 CKEADTQLL------RDGLSDVCDVQPLT--DRALLALQGPKAASVLAKFC-ADAETMRF 181
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M S P + G+ C ++R+GYTGEDG EISVP ++ + EALLSD+DV GLGARDSL
Sbjct: 182 MDSGPRMVDGLACYVSRSGYTGEDGYEISVPADKAEQLAEALLSDKDVLPIGLGARDSL 240
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP ++++L + D ++ FM S P + G+ C ++R+GYTGEDG EISVP
Sbjct: 154 DRALLALQGPKAASVLAKFC-ADAETMRFMDSGPRMVDGLACYVSRSGYTGEDGYEISVP 212
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + EALLSD+DV GLGARDSL
Sbjct: 213 ADKAEQLAEALLSDKDVLPIGLGARDSL 240
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA I +Q G +R+R G G P+R G +F D + VG +TSG P+
Sbjct: 279 AGGFPGADKILAQFDGGATRRRVGLRPEGRAPVREGATLFATADSTEPVGKVTSGGFGPT 338
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ A + + +L+ VR +R+ ++V PFV + Y
Sbjct: 339 LNAPVAMGYVPTALAALDTQLFADVRGQRLPLRVAATPFVPNTY 382
>gi|453089830|gb|EMF17870.1| glycine cleavage system T protein [Mycosphaerella populorum SO2202]
Length = 412
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 151/253 (59%), Gaps = 21/253 (8%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RT LYDLHL HGGKMVPF G+SMPVQY +S+ SH TR K S+FDV HM+Q V G
Sbjct: 9 RTALYDLHLEHGGKMVPFGGYSMPVQYSDLSVGDSHAWTREKASLFDVGHMVQYHVEGPG 68
Query: 258 REEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDS----LFLVSNASR 312
E +LESI + V EL G+ TLS L + GGI DD I+T+ LE +LV+NA
Sbjct: 69 AEAFLESITPSGVKELKVGQSTLSALLLPKTGGIGDDCIITR-LEAGPKHLFYLVTNAGC 127
Query: 313 RKVDMDLMVAAQDRF-KSLGKDIHLQFLSAEER--GLIAVQGPLSSTILQR----HTDLD 365
R+ D + +A + ++ + L+ L A+ + GLIA+QGPLS++ILQ + +D
Sbjct: 128 REKDYKYLSSAISNWDNTVNPVVALRHLEADSKPYGLIALQGPLSASILQSAFATNCKVD 187
Query: 366 LSSLYFMTSRPCTI-----AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDE 417
+S YF T++ T+ +P +R GYTGEDG E+S+ Q + LL +
Sbjct: 188 MSKWYFGTAKYITLDLPSGESLPIVASRGGYTGEDGFELSIHPSQTVSVTRHLLNVATPS 247
Query: 418 DVKLAGLGARDSL 430
++ AGLGARDSL
Sbjct: 248 QLRFAGLGARDSL 260
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 69/118 (58%), Gaps = 8/118 (6%)
Query: 9 IFPGKRRR-ETGGFPGASIIQSQIKS------GVSRKRTGFTSTGVPIRPGYEIFNA-ND 60
I P RR E F GA I QI GV+R+R GF G P R G E+ +A +
Sbjct: 287 IIPKSRRSGERANFHGAETIIPQITPKKEGGVGVTRRRVGFIVQGAPAREGAEVLDAATE 346
Query: 61 QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
Q +G ITSGCPSP+LK+NIAMGYI+ K G E+ V+VR K V+KMPF+ + Y
Sbjct: 347 QVIGRITSGCPSPTLKQNIAMGYIKDGQHKAGTEVLVKVRGKARKAVVSKMPFLPAKY 404
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 12/98 (12%)
Query: 470 GLIAVQGPLSSTILQR----HTDLDLSSLYFMTSRPCTI-----AGIPCTLTRAGYTGED 520
GLIA+QGPLS++ILQ + +D+S YF T++ T+ +P +R GYTGED
Sbjct: 163 GLIALQGPLSASILQSAFATNCKVDMSKWYFGTAKYITLDLPSGESLPIVASRGGYTGED 222
Query: 521 GVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
G E+S+ Q + LL + ++ AGLGARDSL
Sbjct: 223 GFELSIHPSQTVSVTRHLLNVATPSQLRFAGLGARDSL 260
>gi|403367101|gb|EJY83359.1| Aminomethyltransferase [Oxytricha trifallax]
Length = 397
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 142/252 (56%), Gaps = 14/252 (5%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
F+ +SP A +RT L+ H KMVPFAG+ MPV Y I HL R V +FDVS
Sbjct: 13 FTAQASP-ALKRTHLFQYHKDLKAKMVPFAGYEMPVLYPE-GIIKEHLKCRESVGLFDVS 70
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
HM Q + GK E+LE VADV L+ GK TLSL NE+GGI DD I+TK D F+
Sbjct: 71 HMGQVKIYGKDAAEFLEYFTVADVQALEEGKATLSLIMNEKGGINDDCIITKDKNDKFFV 130
Query: 307 VSNASRRKVDMDLM--VAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL 364
V NA + D+ M + + D+FK+ KDI + + EE LIAVQGP + +L +
Sbjct: 131 VINAGCKDNDLAYMKQIKSSDKFKN--KDISIVY--NEENSLIAVQGPKAQKLLDQVLGK 186
Query: 365 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED------ 418
+LS + FMTS+ + ++R GYTGEDG E+SVP + E L S +D
Sbjct: 187 NLSDMDFMTSKVLSHKNHEIRVSRCGYTGEDGFEVSVPEALALNFAEDLRSRKDETGQDY 246
Query: 419 VKLAGLGARDSL 430
GLGARD+L
Sbjct: 247 ALWVGLGARDTL 258
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 71/107 (66%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
KRR+E GGF G I+ +++ GV +KR GF G P R G +I+ + + VG +TSG PS
Sbjct: 288 KRRKEQGGFLGYDRIKRELEQGVKQKRVGFIVDGPPARDGAKIYTKDGKEVGHVTSGAPS 347
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSLKK+I YI+ ++K+ EL V VRDK + +KV KMPFV S YY
Sbjct: 348 PSLKKSIGQAYIQVPHNKLETELNVVVRDKPLPIKVKKMPFVPSRYY 394
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 448 SNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI 507
S+D+FK+ KDI + + EE LIAVQGP + +L + +LS + FMTS+ +
Sbjct: 149 SSDKFKN--KDISIVY--NEENSLIAVQGPKAQKLLDQVLGKNLSDMDFMTSKVLSHKNH 204
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED------VKLAGLGARDSL 555
++R GYTGEDG E+SVP + E L S +D GLGARD+L
Sbjct: 205 EIRVSRCGYTGEDGFEVSVPEALALNFAEDLRSRKDETGQDYALWVGLGARDTL 258
>gi|367043382|ref|XP_003652071.1| hypothetical protein THITE_2113061 [Thielavia terrestris NRRL 8126]
gi|346999333|gb|AEO65735.1| hypothetical protein THITE_2113061 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 146/253 (57%), Gaps = 21/253 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYDLHL+HG KMVPF GF MPVQY + S++ SHL TR + S+FDV HM+Q + G
Sbjct: 87 RKTPLYDLHLAHGAKMVPFGGFHMPVQYASQSVSRSHLFTRERASLFDVGHMVQRIFAGP 146
Query: 257 HREEWLESICVADVHELDPGKGTLS--LFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
+L+ + + + L + TLS L + GGI DD +VT+ E F+V+NA+ R
Sbjct: 147 GAARFLQRLTPSGIEALPEHRSTLSCLLRPDGSGGIVDDTVVTRLAEGRFFVVTNAACR- 205
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEER----GLIAVQGPLSSTILQRHTD-----LD 365
D D + K G+ H EER GL+A+QGP ++ IL R + LD
Sbjct: 206 -DKDNAYLDSELAKWNGEPGHEDLQVTEERLDGQGLVALQGPEAAGILARVLEGGPGGLD 264
Query: 366 LSSLYFMTSRPCTIA------GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD--E 417
L L F S + P ++R GYTGEDG EIS+PG++ + EALL+ E
Sbjct: 265 LKKLLFGQSAYARLKLRGMQLSSPVLISRGGYTGEDGFEISIPGDETVDVTEALLAAGPE 324
Query: 418 DVKLAGLGARDSL 430
V+LAGLGARDSL
Sbjct: 325 KVQLAGLGARDSL 337
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 69/123 (56%), Gaps = 12/123 (9%)
Query: 9 IFPGKRRRETGGFPGASIIQSQI------KSGVSRKRTGFTSTGVPIRPGYEIFNANDQ- 61
I P +RR GF GA +I SQ+ SGV R+R G G P R G EI + +
Sbjct: 364 IIPKERRTADAGFYGADVIASQLVPKSKGGSGVERRRVGLVVEGAPAREGAEIVSRAQEE 423
Query: 62 -----RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
++G +TSGCPSPSL KNIAMGY++ + G E+ V VR + VTKMPFV +
Sbjct: 424 GKEPVKLGTVTSGCPSPSLAKNIAMGYVKDGFHTPGTEVDVLVRGRPRKAVVTKMPFVPT 483
Query: 117 NYY 119
Y+
Sbjct: 484 KYW 486
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 69/126 (54%), Gaps = 17/126 (13%)
Query: 447 LSNDRFKSLGKDIHLQFLSPEER----GLIAVQGPLSSTILQRHTD-----LDLSSLYFM 497
L ++ K G+ H EER GL+A+QGP ++ IL R + LDL L F
Sbjct: 212 LDSELAKWNGEPGHEDLQVTEERLDGQGLVALQGPEAAGILARVLEGGPGGLDLKKLLFG 271
Query: 498 TSRPCTIA------GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD--EDVKLAGL 549
S + P ++R GYTGEDG EIS+PG++ + EALL+ E V+LAGL
Sbjct: 272 QSAYARLKLRGMQLSSPVLISRGGYTGEDGFEISIPGDETVDVTEALLAAGPEKVQLAGL 331
Query: 550 GARDSL 555
GARDSL
Sbjct: 332 GARDSL 337
>gi|423093879|ref|ZP_17081675.1| glycine cleavage system T protein [Pseudomonas fluorescens Q2-87]
gi|397886433|gb|EJL02916.1| glycine cleavage system T protein [Pseudomonas fluorescens Q2-87]
Length = 374
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 144/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR++ +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTRAQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + LE++ D+ +L G ++FTN GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGAEAAKALETLVPVDIIDLPVGMQRYAMFTNANGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + A +G+ ++ L E R L+A+QGP + T+L R D++ + F
Sbjct: 121 CKDQDLAHLRA------HIGEQCSIEPLF-ETRALLALQGPAAVTVLARLAP-DVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + T+ G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFQRVTLLGVDCFVSRSGYTGEDGFEISVPAADAEKLARALLAEPEVAAIGLGARDSL 231
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q + GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAETVFAQQQGGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGDIIGTVCSGGFGPTLGGPLAMGYLDSAYVALDTPVWAVVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + T+L R D++ + FM + T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 ETRALLALQGPAAVTVLARLAP-DVAKMTFMQFQRVTLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAADAEKLARALLAEPEVAAIGLGARDSL 231
>gi|83646575|ref|YP_435010.1| glycine cleavage system T protein [Hahella chejuensis KCTC 2396]
gi|83634618|gb|ABC30585.1| glycine cleavage system T protein [Hahella chejuensis KCTC 2396]
Length = 376
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 150/233 (64%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLYDLH+ G KMV FAG++MPV + A I HLHTR+K +FDVSHM Q + G
Sbjct: 12 KTPLYDLHVECGAKMVEFAGYAMPVTFPA-GIIKEHLHTRAKAGLFDVSHMGQVRLKGAG 70
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E LE++ D+ L+ G +LFTN++GGI DDL+VT T ED LFLV NA+ ++ D+
Sbjct: 71 AAEALEALVPGDIVGLENGAQRYTLFTNDKGGILDDLMVTNTGED-LFLVVNAACKEQDI 129
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R K LG + ++ L E+R L+A+QGP ++ ++++ +L+ L FMT
Sbjct: 130 -----AHLR-KHLGDKVEIEVL--EDRALLALQGPAAAGVMEQLAP-ELTKLVFMTGAWA 180
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C +TR+GYTGEDG EISVP ++ + LL+ DV+ GLGARDSL
Sbjct: 181 TLDGAECFVTRSGYTGEDGYEISVPADRAEALARKLLAHPDVEAIGLGARDSL 233
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K LG + ++ L E+R L+A+QGP ++ ++++ +L+ L FMT T+ G C +T
Sbjct: 134 KHLGDKVEIEVL--EDRALLALQGPAAAGVMEQLAP-ELTKLVFMTGAWATLDGAECFVT 190
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISVP ++ + LL+ DV+ GLGARDSL
Sbjct: 191 RSGYTGEDGYEISVPADRAEALARKLLAHPDVEAIGLGARDSL 233
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA + S+ G RKR G G P+R G EI N + VG +TSG PS++
Sbjct: 272 AGGFPGADVTLSEFAEGSPRKRVGLAPQGRAPVREGVEIVNGEGKVVGVVTSGGYGPSVE 331
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K +AMGY+ S +G EL VR K V V V FV+ YY
Sbjct: 332 KPVAMGYVNADCSAMGTELKAIVRGKEVPVTVVSATFVEHRYY 374
>gi|416934664|ref|ZP_11933850.1| glycine cleavage system T protein [Burkholderia sp. TJI49]
gi|325525326|gb|EGD03173.1| glycine cleavage system T protein [Burkholderia sp. TJI49]
Length = 372
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 142/233 (60%), Gaps = 10/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RT L+DLHL G KMVPFAG+ MPVQY + I HLHTRS+ +FDV HM Q ++TG
Sbjct: 7 RTALHDLHLELGAKMVPFAGYEMPVQY-PLGILKEHLHTRSRAGLFDVWHMGQAMLTGTD 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ DV +L G +LFTNEQGGI DDL++ + ++ ++V NA+ + D+
Sbjct: 66 AAAALETLVPIDVIDLPVGMQRYALFTNEQGGILDDLMIARIDDNVFYVVVNAACKARDI 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ S+G + L+ +R L+A+QGP +++IL R L+ L FM S
Sbjct: 126 AHLK------DSIGHRCEVVELT--DRALLALQGPAAASILGRLAP-SLAELTFMQSTRI 176
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG C ++R+GYTGEDG EISVP ++ + LL D V+ GLGARDSL
Sbjct: 177 ELAGAACYVSRSGYTGEDGYEISVPADRAYALARTLLDDPAVQPIGLGARDSL 229
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP +++IL R L+ L FM S +AG C ++R+GYTGEDG EISVP
Sbjct: 143 DRALLALQGPAAASILGRLAP-SLAELTFMQSTRIELAGAACYVSRSGYTGEDGYEISVP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL D V+ GLGARDSL
Sbjct: 202 ADRAYALARTLLDDPAVQPIGLGARDSL 229
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GG+PGA+++ Q+ G+ RKR GF VP+R G +I + + +G +TSG P+
Sbjct: 268 AGGYPGAAVVARQLAEGIQRKRVGFVVKDRVPVREGTDITGPDGRSIGKVTSGGFGPTYG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+A+GY+ + G L VR K V ++V K PFV Y+
Sbjct: 328 SPVAIGYVAIECATPGTTLHAIVRGKPVAIEVAKAPFVPQRYH 370
>gi|39936909|ref|NP_949185.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris CGA009]
gi|39650766|emb|CAE29289.1| glycine cleavage system protein T2 [Rhodopseudomonas palustris
CGA009]
Length = 382
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 141/239 (58%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY LHL+ GGKMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q + K
Sbjct: 11 KRTPLYALHLARGGKMVPFAGYDMPVQY-APGVLKEHLHTRNAAGLFDVSHMGQIELRAK 69
Query: 257 HRE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+ LE++ D+ L PG+ + FTNE GGI DDL+VT L D LFLV NA+
Sbjct: 70 SGKLEDAARALEALIPQDIVALPPGRQRYAQFTNESGGILDDLMVTN-LGDRLFLVVNAA 128
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + A L + L+ +R LIA+QGP + L + D++ + F
Sbjct: 129 CKTEDEAHLRA------HLSDACDITALT--DRALIALQGPKAEAALAKFC-ADVAKMKF 179
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M ++ G+PC ++R+GYTGEDG EISVP + + ALL + DV GLGARDSL
Sbjct: 180 MDVAELSLDGLPCIVSRSGYTGEDGFEISVPADGAERLATALLDNPDVLPIGLGARDSL 238
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + L + D++ + FM ++ G+PC ++R+GYTGEDG EISVP
Sbjct: 152 DRALIALQGPKAEAALAKFC-ADVAKMKFMDVAELSLDGLPCIVSRSGYTGEDGFEISVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + ALL + DV GLGARDSL
Sbjct: 211 ADGAERLATALLDNPDVLPIGLGARDSL 238
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 13 KRRRETG----GFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGA 65
K RR G GF GAS I SQ+ G +R R G G P+R +F + D + VG
Sbjct: 268 KSRRSGGARPAGFLGASAILSQLDGGTARLRVGLRPEGRAPVRENAPLFASADSAEPVGT 327
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG PSL +AMGY+ A + ++ VR +R+ ++V MPFV + Y
Sbjct: 328 VTSGGFGPSLNAPVAMGYVPAALTARDTVVFAEVRGQRLPLRVAAMPFVPNTY 380
>gi|456354264|dbj|BAM88709.1| glycine cleavage system T-protein [Agromonas oligotrophica S58]
Length = 385
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 164/285 (57%), Gaps = 29/285 (10%)
Query: 189 PGSSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
P ++PS +RTPL+ LH+S GGKMVPFAG+ MPVQY A + HLHTRS +FDVSH
Sbjct: 4 PAAAPSVSLKRTPLHALHVSLGGKMVPFAGYEMPVQY-APGVLKEHLHTRSAAGLFDVSH 62
Query: 248 MLQTVVTGKHRE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED 302
M Q + K + LE + D+ + PG+ + FTN GGI DDL+V +
Sbjct: 63 MGQVALVPKSGKVADAAAALERLVPQDIIGIPPGRQRYAQFTNPDGGILDDLMVA-NFGE 121
Query: 303 SLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT 362
L LV NA+ + D+ L+ QD +L +Q L+ +R L+A+QGP ++ +L +
Sbjct: 122 HLVLVVNAACKDADIKLL---QD---ALSDACEVQPLN--DRALLALQGPKAAAVLAKFC 173
Query: 363 DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE-DVKL 421
+ + FM + P T+ G+ C ++R+GYTGEDG EISVP Q + +ALLSD+ DV
Sbjct: 174 -AEAEGMRFMDAGPRTVDGLACYVSRSGYTGEDGFEISVPANQAEQLADALLSDDKDVLP 232
Query: 422 AGLGARDSL---------SGDI-TLNTPVPHGSLKLSNDRFKSLG 456
GLGARDSL DI T TPV G+L+ S + + G
Sbjct: 233 IGLGARDSLRLEAGLCLYGHDIDTTTTPV-EGALEWSVQKVRRNG 276
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 92/187 (49%), Gaps = 39/187 (20%)
Query: 376 PCTIAGIPCTLTR-AGYTGEDG-----VEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
P I GIP R A +T DG + ++ GE +V A D D+KL +D+
Sbjct: 87 PQDIIGIPPGRQRYAQFTNPDGGILDDLMVANFGEHLVLVVNAACKDADIKLL----QDA 142
Query: 430 LSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDL 489
LS D P+ +R L+A+QGP ++ +L +
Sbjct: 143 LS-DACEVQPL--------------------------NDRALLALQGPKAAAVLAKFC-A 174
Query: 490 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE-DVKLAG 548
+ + FM + P T+ G+ C ++R+GYTGEDG EISVP Q + +ALLSD+ DV G
Sbjct: 175 EAEGMRFMDAGPRTVDGLACYVSRSGYTGEDGFEISVPANQAEQLADALLSDDKDVLPIG 234
Query: 549 LGARDSL 555
LGARDSL
Sbjct: 235 LGARDSL 241
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA I +Q G +R+R G G P+R G +F D + VG +TSG P+
Sbjct: 280 AGGFPGADRILAQFDHGAARRRVGLRPEGRAPVREGATLFATADAAEPVGKVTSGGFGPT 339
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ A + + +L+ VR +R+ ++V MPFV + Y
Sbjct: 340 LNAPVAMGYVPMALAALDTKLFADVRGQRLPLRVAAMPFVPNTY 383
>gi|323507968|emb|CBQ67839.1| probable GCV1-glycine decarboxylase, subunit T, mitochondrial
[Sporisorium reilianum SRZ2]
Length = 453
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 148/250 (59%), Gaps = 14/250 (5%)
Query: 191 SSPSAE-----QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDV 245
S+PSA +T LYD H+ +GGKMVPF G+ MP+ YG V ASH H R+ +FDV
Sbjct: 70 STPSAPLTDSLSKTGLYDFHVKNGGKMVPFGGYLMPLTYGDVGQVASHHHVRTHAGLFDV 129
Query: 246 SHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLF 305
HM+Q G ++L+ + A + + TLS+ +EQGGI DDLI+TK +DS +
Sbjct: 130 GHMVQHTFKGPGALKFLQHLTPASLTSMPAFSSTLSVLLSEQGGILDDLIITKHADDSFY 189
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DL 364
+V+NA R D+ D + G + + + ++ GL+A+QGP ++ +L++ D
Sbjct: 190 VVTNAGCRTDDLAWFKKQLDAWT--GDAVEHKVM--DDWGLLALQGPTAAKVLEKLAGDF 245
Query: 365 DLSSLYFMTSR--PCTIAG--IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVK 420
DL+ L F S P ++ G + C + RAGYTGEDG EIS+P + E LL+D +V+
Sbjct: 246 DLNQLTFGKSAFVPLSVNGDKVECHVARAGYTGEDGFEISIPPASTVALAETLLADSEVQ 305
Query: 421 LAGLGARDSL 430
LAGL ARDSL
Sbjct: 306 LAGLAARDSL 315
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GK RR F GA + ++K G R+R G G R G +F + VG +TSG P
Sbjct: 344 GKDRRAAADFLGAERVLKELKEGPPRRRVGLLIDGGIAREGANLFTPEGELVGRVTSGIP 403
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L KNIAM ++ K G +L V +R K D +V K+PFV++ ++
Sbjct: 404 SPTLGKNIAMALVQNGQHKKGTKLKVEIRKKLRDAEVAKVPFVENKFF 451
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 5/94 (5%)
Query: 467 EERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSR--PCTIAG--IPCTLTRAGYTGEDG 521
++ GL+A+QGP ++ +L++ D DL+ L F S P ++ G + C + RAGYTGEDG
Sbjct: 222 DDWGLLALQGPTAAKVLEKLAGDFDLNQLTFGKSAFVPLSVNGDKVECHVARAGYTGEDG 281
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EIS+P + E LL+D +V+LAGL ARDSL
Sbjct: 282 FEISIPPASTVALAETLLADSEVQLAGLAARDSL 315
>gi|388466372|ref|ZP_10140582.1| aminomethyltransferase [Pseudomonas synxantha BG33R]
gi|388009952|gb|EIK71139.1| aminomethyltransferase [Pseudomonas synxantha BG33R]
Length = 374
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q +TG +
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQIRLTGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNEQGGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G ++ L EER L+A+QGP + +L R +++ + FM
Sbjct: 127 -----AHLR-QHIGDQCTIEPLF-EERALLALQGPAAVKVLARLAP-EVTRMTFMQFATL 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP E + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAENAESLARSLLAEAEVQAIGLGARDSL 231
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G FPGA I +Q ++GVSRKR G P+R G EI +
Sbjct: 251 IEASLLWAISKARRADGPRAGAFPGADRIFTQQQAGVSRKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G + SG PSL +AMGY++ A++ + E+ VR K+V ++V+KMPFV
Sbjct: 311 EHGTVIGTVCSGGFGPSLGGPLAMGYLDTAFTALDTEVSALVRGKKVPLRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVKVLARLAP-EVTRMTFMQFATLRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + +LL++ +V+ GLGARDSL
Sbjct: 203 PAENAESLARSLLAEAEVQAIGLGARDSL 231
>gi|90423081|ref|YP_531451.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris BisB18]
gi|90105095|gb|ABD87132.1| glycine cleavage system T protein [Rhodopseudomonas palustris
BisB18]
Length = 384
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 139/239 (58%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
QRTPL+ LHLS GGKMVPFAG+ MPVQY + HLHTR+K +FDVSHM Q + K
Sbjct: 13 QRTPLHALHLSLGGKMVPFAGYEMPVQY-PTGVLKEHLHTRAKAGLFDVSHMGQLELRAK 71
Query: 257 -----HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
LE + D+ + PG+ + FTNEQGGI DDL+V + LFLV NA+
Sbjct: 72 SGHVADAARALERLVPQDILAIAPGRQRYAQFTNEQGGILDDLMVANSGR-HLFLVVNAA 130
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + + D+ +S +R L+A+QGP + L R + +L F
Sbjct: 131 CKAAD-------EAHLRDGLSDV-CDIVSRPDRALLALQGPHAEAALSRLCS-QVDTLRF 181
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + P T+ G+ C ++R+GYTGEDG EISVP + + EALL D +V GLGARDSL
Sbjct: 182 MDTAPLTVMGLDCLVSRSGYTGEDGYEISVPADGAVALAEALLDDPEVLPIGLGARDSL 240
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 463 FLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGV 522
+S +R L+A+QGP + L R + +L FM + P T+ G+ C ++R+GYTGEDG
Sbjct: 149 IVSRPDRALLALQGPHAEAALSRLCS-QVDTLRFMDTAPLTVMGLDCLVSRSGYTGEDGY 207
Query: 523 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP + + EALL D +V GLGARDSL
Sbjct: 208 EISVPADGAVALAEALLDDPEVLPIGLGARDSL 240
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAITSGCPSPSL 75
GGF GA++I Q+++G R+R G G P+R G +F ++ +G I+SG PSL
Sbjct: 280 GGFAGAAVILDQLETGAPRRRVGLRPDGRAPVREGAPLFGDDSATDSIGTISSGGFGPSL 339
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ ++ ++ +R +R+ ++V PF+ ++Y
Sbjct: 340 GGPLAMGYLPTPQARHDAVIFAELRGQRLPLRVCATPFIPTSY 382
>gi|115491459|ref|XP_001210357.1| aminomethyltransferase, mitochondrial precursor [Aspergillus
terreus NIH2624]
gi|114197217|gb|EAU38917.1| aminomethyltransferase, mitochondrial precursor [Aspergillus
terreus NIH2624]
Length = 477
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 156/269 (57%), Gaps = 22/269 (8%)
Query: 182 GLTFVFSPGSSPSAEQR-TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKV 240
G+ + SP +P+ R T LYDLH++ G KMVPFAG+SMP+QY +S SH TR K
Sbjct: 61 GVRYASSP--APTGPLRKTALYDLHVARGAKMVPFAGYSMPLQYSDLSHVESHKWTREKA 118
Query: 241 SVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKT 299
S+FDVSHM+Q ++G E L + + + +L TLS L + GGI DD ++T+
Sbjct: 119 SLFDVSHMVQHQLSGPGAMELLMKVSPSSLDKLKINTSTLSCLLEDGTGGIIDDTVITRR 178
Query: 300 LEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ 359
EDS + V+NA RR D+ + A +K+ L++ E+R L+A+QGPL++ +LQ
Sbjct: 179 GEDSFYFVTNAGRRDEDLAFLEAEITAYKNAHGPESLKWEILEDRALVALQGPLAAEVLQ 238
Query: 360 -----RHTDLDLSSLYFMTSRPCTI-------AGIPCTLTRAGYTGEDGVEISVPG---- 403
+ DLS+LYF R + + P ++R GYTGEDG EIS+P
Sbjct: 239 SVVNGSGPETDLSTLYFGNCRDLYLTLPDGSRSPHPVLVSRTGYTGEDGFEISIPAFADC 298
Query: 404 -EQCTHIVEALLSDED-VKLAGLGARDSL 430
E T + E LLS+ D V+LAGL ARDSL
Sbjct: 299 PELPTQVTELLLSNPDQVRLAGLAARDSL 327
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 71/120 (59%), Gaps = 10/120 (8%)
Query: 12 GKRRRE--TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQ---R 62
GK RR+ T F GAS+I Q+ S +S++R GFT G P R G I + ND+ +
Sbjct: 356 GKDRRDPATATFNGASVILPQLASPAKTLSQRRVGFTVEKGSPAREGAVIVDLNDESRTQ 415
Query: 63 VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+G ITSG PSPSL NIAMGYI+ K G E+ + VR+K V MP+V+S +Y P
Sbjct: 416 IGVITSGLPSPSLGGTNIAMGYIKQGMHKKGTEVGILVRNKVRKASVVGMPWVESKFYRP 475
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 18/107 (16%)
Query: 467 EERGLIAVQGPLSSTILQR-----HTDLDLSSLYFMTSRPCTI-------AGIPCTLTRA 514
E+R L+A+QGPL++ +LQ + DLS+LYF R + + P ++R
Sbjct: 221 EDRALVALQGPLAAEVLQSVVNGSGPETDLSTLYFGNCRDLYLTLPDGSRSPHPVLVSRT 280
Query: 515 GYTGEDGVEISVPG-----EQCTHIVEALLSDED-VKLAGLGARDSL 555
GYTGEDG EIS+P E T + E LLS+ D V+LAGL ARDSL
Sbjct: 281 GYTGEDGFEISIPAFADCPELPTQVTELLLSNPDQVRLAGLAARDSL 327
>gi|302497878|ref|XP_003010938.1| N,N-dimethylglycine oxidase, putative [Arthroderma benhamiae CBS
112371]
gi|291174484|gb|EFE30298.1| N,N-dimethylglycine oxidase, putative [Arthroderma benhamiae CBS
112371]
Length = 483
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 152/272 (55%), Gaps = 22/272 (8%)
Query: 181 SGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKV 240
SGL F + ++ S +RT YD H+ H GKMVPFAG++MP+QY +S SH TR K
Sbjct: 63 SGLRFTSNSSAAESDIKRTQFYDFHVEHKGKMVPFAGYAMPLQYADLSHVESHKWTREKA 122
Query: 241 SVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKT 299
S+FDVSHM+Q + G + L I A + L TLS +E GGI DD +VT+
Sbjct: 123 SLFDVSHMVQHHIIGPGARDLLMKITPASLDSLKDNHSTLSCLLDESTGGIVDDTVVTRL 182
Query: 300 LEDSLFLVSNASRRKVDMDLMVAAQDRFKS----LGKDIHLQFLSAEERGLIAVQGPLSS 355
+S + V+NA RRK D++ + + F++ +D + + + R L+A+QGP S+
Sbjct: 183 GPESFYFVTNAGRRKEDLEFLTKEIEAFRNSQDPSKRDSVINWTILDNRALVALQGPASA 242
Query: 356 TILQ------RHTDLDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVP 402
LQ D DLS+L+F R + + P L +R GYTGEDG EIS+P
Sbjct: 243 NALQPLIKKESSADADLSTLHFGQCRQLHLNFPDGSSTPSRLLISRTGYTGEDGFEISIP 302
Query: 403 GEQCTH----IVEALLSDEDVKLAGLGARDSL 430
+ + + E L+S+ DVKLAGL ARDSL
Sbjct: 303 TDSDANLPRRVAELLISNPDVKLAGLAARDSL 334
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 12 GKRRRETGG----FPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQR- 62
GK RR+ F GAS I Q+ S ++R+R GFT G P R G I + D +
Sbjct: 363 GKDRRDPSSPLSKFNGASTILPQLASPAKTLTRRRVGFTVEGGAPAREGAVIVDLADGKT 422
Query: 63 -VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSG PSP+L NIAMGYI+ K G E+ + VR K VT MP+++S +Y
Sbjct: 423 EVGVVTSGLPSPTLGGTNIAMGYIKQGLHKKGTEVGILVRKKLRKATVTPMPWIESKFY 481
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 17/106 (16%)
Query: 467 EERGLIAVQGPLSSTILQ------RHTDLDLSSLYFMTSRPCTI-----AGIPCTL--TR 513
+ R L+A+QGP S+ LQ D DLS+L+F R + + P L +R
Sbjct: 229 DNRALVALQGPASANALQPLIKKESSADADLSTLHFGQCRQLHLNFPDGSSTPSRLLISR 288
Query: 514 AGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EIS+P + + + E L+S+ DVKLAGL ARDSL
Sbjct: 289 TGYTGEDGFEISIPTDSDANLPRRVAELLISNPDVKLAGLAARDSL 334
>gi|154251144|ref|YP_001411968.1| glycine cleavage system T protein [Parvibaculum lavamentivorans
DS-1]
gi|154155094|gb|ABS62311.1| glycine cleavage system T protein [Parvibaculum lavamentivorans
DS-1]
Length = 380
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 145/238 (60%), Gaps = 14/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPL+ LH+ G KMVPFAG+ MPVQY + A HLHTR +FDVSHM Q + G
Sbjct: 12 KTTPLHALHVELGAKMVPFAGYDMPVQY-PDGVLAEHLHTRKAAGLFDVSHMGQAYLVGP 70
Query: 257 HREE---WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS-LFLVSNASR 312
+E++ D+ L+P +L N++GGI+DDL+VT+T +D LFLV NA+
Sbjct: 71 DHASISAAIEALVPGDILGLEPLAIRYTLLLNDKGGIRDDLMVTRTAKDGMLFLVVNAAC 130
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D + A +L K I L+ L E+R LIA+QGP ++ + R ++ FM
Sbjct: 131 KDADFAHIAA------NLPKGIELRRL--EDRALIALQGPEAAAVFARLAP-GAATQDFM 181
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T T+AGIPC ++R+GYTGEDG EISVP + + + LL++ +VK GLGARDSL
Sbjct: 182 TGVEMTVAGIPCLVSRSGYTGEDGYEISVPDGEAVALTKKLLAEPEVKPIGLGARDSL 239
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE G FPGA II Q+ +GV+RKR G G P R G EI + + +++G +TSG
Sbjct: 269 KRRREEGNFPGAKIILDQVANGVTRKRVGLLPEGKAPAREGTEITDKSGRKIGVVTSGGY 328
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
PS+ IAMGY+E +++K G ++ + VR K KV MPFV+ +Y P K
Sbjct: 329 GPSVGGPIAMGYVETSHAKSGTDIELMVRGKGRPAKVVPMPFVEKRFYRPAK 380
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L K I L+ L E+R LIA+QGP ++ + R ++ FMT T+AGIPC ++R
Sbjct: 141 NLPKGIELRRL--EDRALIALQGPEAAAVFARLAP-GAATQDFMTGVEMTVAGIPCLVSR 197
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP + + + LL++ +VK GLGARDSL
Sbjct: 198 SGYTGEDGYEISVPDGEAVALTKKLLAEPEVKPIGLGARDSL 239
>gi|423693275|ref|ZP_17667795.1| aminomethyltransferase [Pseudomonas fluorescens SS101]
gi|387999586|gb|EIK60915.1| aminomethyltransferase [Pseudomonas fluorescens SS101]
Length = 374
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 142/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q +TG +
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTREQAGLFDVSHMGQIRLTGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNEQGGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R +G ++ L EER L+A+QGP + +L R +++ + FM
Sbjct: 127 -----AHLR-THIGDQCTIEPLF-EERALLALQGPAAVKVLARLAP-EVTQMTFMQFATL 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAANAESLARSLLAETEVQAIGLGARDSL 231
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GV+RKR G P+R G EI +
Sbjct: 251 IEASLLWAISKARRADGARAGGFPGADRIFTQQQTGVARKRIGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A +G++ SG P+L +AMGY++ A+ + E+ VR K+V ++V+KMPFV
Sbjct: 311 AQGTVIGSVCSGGFGPTLGGPLAMGYLDSAFVALDTEVCAMVRGKKVPLRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVKVLARLAP-EVTQMTFMQFATLRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAANAESLARSLLAETEVQAIGLGARDSL 231
>gi|358640240|dbj|BAL27536.1| glycine cleavage T-protein [Azoarcus sp. KH32C]
Length = 376
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPLYDLH+S G KMVPFAG++MPVQY I H HTR++ +FDVSHM Q + G
Sbjct: 13 TPLYDLHVSLGAKMVPFAGYAMPVQY-PTGIIKEHTHTRTQAGLFDVSHMGQVFLVGPDA 71
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L G +LFTNE GG+ DDL+V D LF+V NA+ + D+
Sbjct: 72 AAALETLVPVDIVDLPEGMQRYALFTNEGGGVMDDLMVAN-FGDRLFVVVNAACKAQDVA 130
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
M K L ++ L E+R L+A+QGP + ++ R + + + FMT+ T
Sbjct: 131 HMQ------KHLSGRCKVEVL--EDRALLALQGPAAGAVMARLAP-ETAEMVFMTTATVT 181
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP ++ + LLS +V GLGARDSL
Sbjct: 182 LVGSKCFVSRSGYTGEDGFEISVPADKAEALARELLSHPEVAPIGLGARDSL 233
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN 57
+ S LL K RR GG+PGA +I I +GVSRKR G VP+R G EI +
Sbjct: 253 VESSLLWALSKPRRADGARPGGYPGADVILGHIANGVSRKRVGLRPNARVPVREGSEIVD 312
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ ++VG +TSG P+L+ +AMGY+E A +KVG +L VR K V ++V PFV
Sbjct: 313 ASGRKVGVVTSGGFGPTLEAPVAMGYVETALAKVGTQLSAIVRGKPVPIEVASTPFVPQR 372
Query: 118 YY 119
YY
Sbjct: 373 YY 374
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + ++ R + + + FMT+ T+ G C ++R+GYTGEDG EISV
Sbjct: 146 EDRALLALQGPAAGAVMARLAP-ETAEMVFMTTATVTLVGSKCFVSRSGYTGEDGFEISV 204
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + LLS +V GLGARDSL
Sbjct: 205 PADKAEALARELLSHPEVAPIGLGARDSL 233
>gi|77460615|ref|YP_350122.1| glycine cleavage system T protein [Pseudomonas fluorescens Pf0-1]
gi|77384618|gb|ABA76131.1| putative aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas fluorescens Pf0-1]
Length = 374
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLSKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + K +G ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDLAHLQ------KHIGDQCKIEQLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFTRVKLLGVDCFVSRSGYTGEDGFEISVPAVDAEKLARALLAEPEVAAIGLGARDSL 231
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAEQVFAQQQNGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGSVCSGGFGPTLGGPLAMGYLDSAYVALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAVDAEKLARALLAEPEVAAIGLGARDSL 231
>gi|365540742|ref|ZP_09365917.1| aminomethyltransferase [Vibrio ordalii ATCC 33509]
Length = 377
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 143/232 (61%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G +
Sbjct: 13 TPLHALHIEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTREAAGLFDVSHMGQLRLHGANA 71
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LES+ D+ +L GK + FTN QGGI DDL+VT L+D LF+V NA+ + D+
Sbjct: 72 AQALESLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVT-NLDDHLFVVVNAACKAQDIA 130
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L + + L+ + ++R L+A+QGP ++ +L R + +++FM +
Sbjct: 131 HLQA------HLPQGVELEVI--DDRALLALQGPKAAEVLAR-LQPQVMAMHFMDIQLMD 181
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP EQ + L + E+V+ GLGARDSL
Sbjct: 182 IDGAQCIVSRSGYTGEDGYEISVPAEQAEALARKLTAYEEVEWIGLGARDSL 233
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)
Query: 14 RRRE---TGGFPGASIIQSQIKS-GVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITS 68
RR E GGFPGA II QI+S V+RKR G T P+R G E+F+A+ Q +G +TS
Sbjct: 265 RRAEGERAGGFPGADIILGQIESKDVARKRVGLVGLTKAPVREGTELFDADGQHIGVVTS 324
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G P+ K+++M YI S +G E++ VR K + + V KMPFV YY
Sbjct: 325 GTAGPTAGKSVSMAYIRADLSTIGTEIFADVRGKMLPMVVEKMPFVAQRYY 375
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R + +++FM + I G C ++R+GYTGEDG EISV
Sbjct: 146 DDRALLALQGPKAAEVLAR-LQPQVMAMHFMDIQLMDIDGAQCIVSRSGYTGEDGYEISV 204
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + L + E+V+ GLGARDSL
Sbjct: 205 PAEQAEALARKLTAYEEVEWIGLGARDSL 233
>gi|389682258|ref|ZP_10173601.1| aminomethyltransferase [Pseudomonas chlororaphis O6]
gi|388554132|gb|EIM17382.1| aminomethyltransferase [Pseudomonas chlororaphis O6]
Length = 374
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q ++G +
Sbjct: 8 KTPLHSLHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQIRLSGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+ ++ D+
Sbjct: 67 AAQALETLVPVDIIDLPVGMQRYAMFTNENGGILDDLMVANLGNDELFLVVNAACKEQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G+ ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 127 -----AHLR-QHIGQACSIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 179 KLLGVDCFVSRSGYTGEDGFEISVPAADAETLARALLAEPEVAAIGLGARDSL 231
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q +GV RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAEQVFAQQLNGVQRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGYI+ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEVIGSVCSGGFGPTLGGPLAMGYIDSAYVALDTPVWAIVRGKKVPMLVSKMPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAADAETLARALLAEPEVAAIGLGARDSL 231
>gi|344300106|gb|EGW30446.1| hypothetical protein SPAPADRAFT_63281 [Spathaspora passalidarum
NRRL Y-27907]
Length = 395
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 150/250 (60%), Gaps = 16/250 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+P+ +TPL++ H++ GGKMVP+AGF MPV Y + S SH RSKV +FDVSHMLQ
Sbjct: 11 SAPANLLKTPLHEAHVALGGKMVPYAGFEMPVLYNSQSHIDSHNWVRSKVGLFDVSHMLQ 70
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+TGK + L+ I D++ L + +LS+ NE GGI DD I+TK EDS ++V+NA
Sbjct: 71 HKITGKDAKSLLQKITPIDLNSLPMNESSLSVLLNENGGIIDDCIITKHGEDSFYMVTNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D++ + + F S H F E L+A+QGP + +LQ+ T+ DLS +Y
Sbjct: 131 GCRAKDVEFIKKEAEAFGSSVN--HNTF----EGTLLAIQGPKAQELLQKFTNEDLSKIY 184
Query: 371 FMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVPGEQCT------HIVEALLSD--EDVK 420
F +R ++ I T L R+GYTGEDG E+S+P + ++L+++ + VK
Sbjct: 185 FGQTRFVKLSPIGATVHLARSGYTGEDGFELSIPSSNAAETKDSLNFFQSLIAEYPDLVK 244
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 245 PIGLAARDSL 254
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 9 IFPGKRRRETGGFPGASIIQSQI--KSGVSRKRTGFTSTGVPIRPGYEIF-NANDQRVGA 65
+ P RR GF GAS I SQI KS V+ +R G S G R ++IF N Q +G
Sbjct: 281 LIPKARRDANAGFNGASKILSQINDKSLVTHRRIGVVSKGPSPREHFKIFSNDGSQEIGY 340
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
ITSG PSP+L NIA YI+ + K+G ++ + +R K D K+TK+PFV SN Y P
Sbjct: 341 ITSGSPSPTLGGNIAQAYIDKKF-KIGSDIKIEIRGKLRDGKITKLPFVASNLYKP 395
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 47/218 (21%)
Query: 349 VQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTH 408
+ G + ++LQ+ T +DL+SL P + + L G +D + I+ GE +
Sbjct: 73 ITGKDAKSLLQKITPIDLNSL------PMNESSLSVLLNENGGIIDDCI-ITKHGEDSFY 125
Query: 409 IVEALLSDEDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDI-HLQFLSPE 467
+V AG A+D ++ ++ G + H F
Sbjct: 126 MVTN---------AGCRAKD----------------VEFIKKEAEAFGSSVNHNTF---- 156
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEIS 525
E L+A+QGP + +LQ+ T+ DLS +YF +R ++ I T L R+GYTGEDG E+S
Sbjct: 157 EGTLLAIQGPKAQELLQKFTNEDLSKIYFGQTRFVKLSPIGATVHLARSGYTGEDGFELS 216
Query: 526 VPGEQCT------HIVEALLSD--EDVKLAGLGARDSL 555
+P + ++L+++ + VK GL ARDSL
Sbjct: 217 IPSSNAAETKDSLNFFQSLIAEYPDLVKPIGLAARDSL 254
>gi|307545119|ref|YP_003897598.1| glycine cleavage system protein T (aminomethyltransferase)
[Halomonas elongata DSM 2581]
gi|307217143|emb|CBV42413.1| glycine cleavage system T protein (aminomethyltransferase)
[Halomonas elongata DSM 2581]
Length = 369
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 144/237 (60%), Gaps = 13/237 (5%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+ +++TPL+DLH+ G +MVPFAG+SMPVQY + + H HTR +FDVSHM Q ++
Sbjct: 2 NEQRKTPLFDLHVELGARMVPFAGYSMPVQY-ELGVKKEHEHTRRACGLFDVSHMGQVLL 60
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G + E LE++ AD+ L G+ LFT E GGI DDL++ D L+LV NA+ +
Sbjct: 61 RGPNPAEALETLVPADLVGLPEGRQRYGLFTAEDGGILDDLMIVNA-GDHLYLVVNAACK 119
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D+ L + + L +RGL+A+QGP ++T++QR + + FM
Sbjct: 120 EQDI----------AHLRRGLPDHELEVLDRGLLALQGPEAATVMQRLCP-EACEMVFMQ 168
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
TI GI ++R+GYTGEDG EISVP EQ + LL++E+V+ GLGARDSL
Sbjct: 169 HGRFTIEGIEVWISRSGYTGEDGFEISVPAEQTEALARRLLAEEEVEAIGLGARDSL 225
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+RGL+A+QGP ++T++QR + + FM TI GI ++R+GYTGEDG EISVP
Sbjct: 139 DRGLLALQGPEAATVMQRLCP-EACEMVFMQHGRFTIEGIEVWISRSGYTGEDGFEISVP 197
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
EQ + LL++E+V+ GLGARDSL
Sbjct: 198 AEQTEALARRLLAEEEVEAIGLGARDSL 225
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 14 RRRET---GGFPGASIIQSQI-KSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITS 68
RRR+ GGFPGA +I Q+ + RKR G G P+R G E+++ + +GA+ S
Sbjct: 257 RRRDGERPGGFPGADLILHQVAEKDHQRKRVGLLGEGRAPVREGVELYDGDGNAIGAVCS 316
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G PS+ + +AMGY+ + + ++ VR KR+ + VTKMPFV+ Y+
Sbjct: 317 GGFGPSVGRPVAMGYVSIDQAAIDTVVYAEVRGKRLPMTVTKMPFVQPGYH 367
>gi|398973736|ref|ZP_10684578.1| glycine cleavage system T protein [Pseudomonas sp. GM25]
gi|398142688|gb|EJM31581.1| glycine cleavage system T protein [Pseudomonas sp. GM25]
Length = 374
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLSKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + K +G ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDLAHLQ------KHIGDQCKIEQLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFTRVKLLGVDCFVSRSGYTGEDGFEISVPAADAEKLARALLAEPEVAAIGLGARDSL 231
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAEHVFAQQQNGVQRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGSVCSGGFGPTLGGPLAMGYLDSAYVALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAADAEKLARALLAEPEVAAIGLGARDSL 231
>gi|312962741|ref|ZP_07777230.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6]
gi|311283116|gb|EFQ61708.1| glycine cleavage system T protein [Pseudomonas fluorescens WH6]
Length = 374
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 141/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q +TG +
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTRDQAGLFDVSHMGQIRLTGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNEQGGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A +G ++ L E R L+A+QGP + +L R ++S + FM
Sbjct: 127 AHLRA------HIGDQCTVEPLF-EARALLALQGPAAVKVLARLAP-EVSKMTFMQFAAL 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAASAESLARSLLAETEVEAIGLGARDSL 231
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVSRKR G P+R G EI +
Sbjct: 251 IEASLLWAISKARRADGVRAGGFPGADRIFTQQQTGVSRKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A +G++ SG PSL +AMGY++ A++ + E+ VR KRV ++V+KMPFV
Sbjct: 311 AEGTVIGSVCSGGFGPSLGGPLAMGYLDSAFTALDTEVSALVRGKRVPLRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + +L R ++S + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EARALLALQGPAAVKVLARLAP-EVSKMTFMQFAALRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAASAESLARSLLAETEVEAIGLGARDSL 231
>gi|452987385|gb|EME87140.1| hypothetical protein MYCFIDRAFT_53899 [Pseudocercospora fijiensis
CIRAD86]
Length = 489
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 168/317 (52%), Gaps = 42/317 (13%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LY LHL +G KMVPF G+SMPVQY +S+ SH+ TR K S+FDV HM+Q V G
Sbjct: 84 KTDLYHLHLENGAKMVPFGGYSMPVQYSDLSVGESHVWTREKASLFDVGHMVQYHVEGPG 143
Query: 258 REEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDS---LFLVSNASRR 313
E +LES+ A + EL PG+ TLS L + GGI DD ++T+ E +LV+NA R
Sbjct: 144 AEAFLESVTPAGIKELKPGQSTLSALLHPKTGGIVDDCMITRLEEGPKHLFYLVTNAGCR 203
Query: 314 KVDMDLMVAAQDRFKSLGKDI----HLQFLSAEERGLIAVQGPLSSTILQ----RHTDLD 365
D + A +++ + + HLQ + GLIA+QGPLS ILQ + +D
Sbjct: 204 SKDYAFLSKAIEKWDNTVNPVTHLRHLQANDGQTYGLIALQGPLSKDILQETLAKTCKVD 263
Query: 366 LSSLYFMTSRPCTIA-------GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--- 415
LS YF T + T+ +P +R GYTGEDG E+S+ Q + + LL
Sbjct: 264 LSKWYFGTQKYITVTLRSTGEESLPIVASRGGYTGEDGFELSIHPSQTVEVTKTLLEAAG 323
Query: 416 DEDVKLAGLGARDSL---SG---------------DITLNTPVPHGSLKLSNDRFKSLGK 457
+ ++ AGLGARDSL +G + +LN VP + S +R G
Sbjct: 324 KDRLRFAGLGARDSLRLEAGMCLYGHDLDDTTTPVEASLNWIVPKS--RRSGERASFNGA 381
Query: 458 DIHLQFLSPEERGLIAV 474
+ + L+P++ G I V
Sbjct: 382 ETIIPQLTPKKEGGIGV 398
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
Query: 9 IFPGKRRR-ETGGFPGASIIQSQIKS------GVSRKRTGFTSTGVPIRPGYEIFNANDQ 61
I P RR E F GA I Q+ GV+R+R G T TG P R G EI +
Sbjct: 365 IVPKSRRSGERASFNGAETIIPQLTPKKEGGIGVTRRRIGLTVTGSPAREGAEILDKESG 424
Query: 62 RV-GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
V G +TSGCPSP+LK+NIAMGYI+ K G E+ V VR K+ VTKMPFV S Y+
Sbjct: 425 EVIGKVTSGCPSPTLKQNIAMGYIKDGMHKSGTEVDVVVRGKKRQAVVTKMPFVPSKYF 483
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 460 HLQFLSPEERGLIAVQGPLSSTILQ----RHTDLDLSSLYFMTSRPCTIA-------GIP 508
HLQ + GLIA+QGPLS ILQ + +DLS YF T + T+ +P
Sbjct: 229 HLQANDGQTYGLIALQGPLSKDILQETLAKTCKVDLSKWYFGTQKYITVTLRSTGEESLP 288
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
+R GYTGEDG E+S+ Q + + LL + ++ AGLGARDSL
Sbjct: 289 IVASRGGYTGEDGFELSIHPSQTVEVTKTLLEAAGKDRLRFAGLGARDSL 338
>gi|389878647|ref|YP_006372212.1| glycine cleavage system T protein [Tistrella mobilis KA081020-065]
gi|388529431|gb|AFK54628.1| glycine cleavage system T protein [Tistrella mobilis KA081020-065]
Length = 379
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 144/241 (59%), Gaps = 11/241 (4%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
G +P+ +TPLYDLHL+ GGKMVPFAG+ MPVQY + I HLHTR+ +FDVSHM
Sbjct: 10 GGTPADLLKTPLYDLHLAQGGKMVPFAGYLMPVQY-PMGIKGEHLHTRTHAGLFDVSHMG 68
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
Q +TG LE++ D+ L G+ + T + GGI+DDL+ T+ + +FLV N
Sbjct: 69 QARITGPDAAAALENLVPGDITGLGLGRMRYTQLTTDDGGIRDDLMATR-FDTHVFLVVN 127
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A+ + D + A SL DI ++R L+A+QGP + + + +
Sbjct: 128 AACKADDFAHIAAHLPAGHSL--DI------LDDRALLALQGP-EAAAVLAALAPAAADM 178
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FM+ +P IAGIPC ++R+GYTGEDG EISVP ++ + LL+D+ V GLGARDS
Sbjct: 179 AFMSMQPLDIAGIPCLVSRSGYTGEDGYEISVPADRAESLAGKLLADQRVAPIGLGARDS 238
Query: 430 L 430
L
Sbjct: 239 L 239
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + + + + FM+ +P IAGIPC ++R+GYTGEDG EISV
Sbjct: 152 DDRALLALQGP-EAAAVLAALAPAAADMAFMSMQPLDIAGIPCLVSRSGYTGEDGYEISV 210
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + LL+D+ V GLGARDSL
Sbjct: 211 PADRAESLAGKLLADQRVAPIGLGARDSL 239
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN-ANDQRVGAITSGC 70
+RR G+PGA++I + G +RKR G G V R G ++ + A + VG +TSG
Sbjct: 270 RRRTADAGYPGAAVIAAAFAEGPARKRVGLIPEGKVIAREGTDVIDPATGETVGRVTSGG 329
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PS+ +AM Y+ + G L + VR K V MPF Y
Sbjct: 330 FGPSVDGPVAMAYVRADLAAPGTALALDVRGKSRPATVAPMPFAPHRY 377
>gi|316932873|ref|YP_004107855.1| glycine cleavage system T protein [Rhodopseudomonas palustris DX-1]
gi|315600587|gb|ADU43122.1| glycine cleavage system T protein [Rhodopseudomonas palustris DX-1]
Length = 382
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 144/246 (58%), Gaps = 16/246 (6%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
G + +RTPLY LH+S GGKMVPFAG+ MPVQY A+ + HLHTRS +FDVSHM
Sbjct: 4 GDDTQSLKRTPLYALHVSRGGKMVPFAGYDMPVQY-ALGVLKEHLHTRSAAGLFDVSHMG 62
Query: 250 QTVVTGKHRE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSL 304
Q + K + LE++ D+ L PG+ + FTNE GGI DDL+VT L D L
Sbjct: 63 QIELRAKSGKLEDAARALEALIPQDIVALPPGRQRYAQFTNESGGILDDLMVTN-LGDRL 121
Query: 305 FLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL 364
FLV NA+ + D + A L + L+ +R LIA+QGP + L +
Sbjct: 122 FLVVNAACKDADEAHLRA------HLADACDITALT--DRALIALQGPKAEAALAKIC-A 172
Query: 365 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
D++++ FM ++ G+ C ++R+GYTGEDG E+SVP + + ALL + DV GL
Sbjct: 173 DVTTMKFMDVAELSLDGLACIVSRSGYTGEDGFEVSVPADGAERLATALLDNPDVLPIGL 232
Query: 425 GARDSL 430
GARDSL
Sbjct: 233 GARDSL 238
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + L + D++++ FM ++ G+ C ++R+GYTGEDG E+SVP
Sbjct: 152 DRALIALQGPKAEAALAKIC-ADVTTMKFMDVAELSLDGLACIVSRSGYTGEDGFEVSVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + ALL + DV GLGARDSL
Sbjct: 211 ADGAERLATALLDNPDVLPIGLGARDSL 238
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 24 ASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNA--NDQRVGAITSGCPSPSLKKNIA 80
A+ I Q+ SG +R R G G P+R +F + + + +G +TSG PSL +A
Sbjct: 283 AAAILGQLDSGTARLRVGLRPEGRAPVRENAPLFASAVSAEPIGTVTSGGFGPSLNAPVA 342
Query: 81 MGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
MGY+ A + ++ VR +R+ ++V MPFV + Y
Sbjct: 343 MGYLPAALAVRDTVVFAEVRGQRLPLRVVAMPFVPNTY 380
>gi|333899219|ref|YP_004473092.1| glycine cleavage system T protein [Pseudomonas fulva 12-X]
gi|333114484|gb|AEF20998.1| glycine cleavage system T protein [Pseudomonas fulva 12-X]
Length = 373
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 139/233 (59%), Gaps = 10/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR +FDVSHM Q ++ G
Sbjct: 8 KTPLHALHLELGARMVPFAGYEMPVQY-PLGVMKEHLHTREAAGLFDVSHMGQIILRGAG 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FT++ GGI DDL+V D+LFLV NA+ + D
Sbjct: 67 AAKALESLVPVDILDLPVGMQRYAMFTDDNGGILDDLMVANLGNDTLFLVVNAACKHQD- 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
++ Q R Q S ER L+A+QGP + +L R +++ + FM +P
Sbjct: 126 --LMHLQQRIAG-----QCQVESRFERALLALQGPKAVEVLTRLAP-EVAKMTFMQFKPV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 178 RLLGVDCYVSRSGYTGEDGFEISVPANHAEALARSLLAEPEVQPIGLGARDSL 230
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q + GV+RKR G P+R G E+ N
Sbjct: 250 IEASLLWAISKARRADGARPGGFPGAERIFAQQRDGVARKRVGLLPQERTPVREGAELVN 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A + +G + SG PSL +AMGY+ ++ V E+W VR KRV +KV K PFV
Sbjct: 310 AEGEVIGQVCSGGFGPSLGAPLAMGYVPSSHVAVDSEVWALVRGKRVAMKVAKTPFVAQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 9/139 (6%)
Query: 417 EDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQG 476
+D+ +A LG D+L + +N H L R Q S ER L+A+QG
Sbjct: 101 DDLMVANLG-NDTLF--LVVNAACKHQDLMHLQQRIAG-----QCQVESRFERALLALQG 152
Query: 477 PLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVE 536
P + +L R +++ + FM +P + G+ C ++R+GYTGEDG EISVP +
Sbjct: 153 PKAVEVLTRLAP-EVAKMTFMQFKPVRLLGVDCYVSRSGYTGEDGFEISVPANHAEALAR 211
Query: 537 ALLSDEDVKLAGLGARDSL 555
+LL++ +V+ GLGARDSL
Sbjct: 212 SLLAEPEVQPIGLGARDSL 230
>gi|425779358|gb|EKV17425.1| Aminomethyltransferase [Penicillium digitatum PHI26]
gi|425779540|gb|EKV17588.1| Aminomethyltransferase [Penicillium digitatum Pd1]
Length = 484
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 149/263 (56%), Gaps = 25/263 (9%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS +T LYDLHL HG KMVPFAGF MP+QY +S SH+ TR K S+FDVSHM+Q
Sbjct: 74 SSSEPLSKTQLYDLHLEHGAKMVPFAGFDMPLQYADLSHVESHMWTREKASLFDVSHMVQ 133
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSN 309
++G + L+ + + V +L TLS E GGI DD ++T+ ED+ + V+N
Sbjct: 134 HQLSGPGAIDLLKKVTPSSVDKLALNTSTLSCLLEEGTGGIVDDCVITRRGEDTFYFVTN 193
Query: 310 ASRRKVDMDLMVAAQD--RFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-------- 359
A RR D+ + A + RFK + + L+ +R L+A+QGPL++++LQ
Sbjct: 194 AGRRTEDLAFLTAEIEAYRFKHGADSLKWEILA--DRALVALQGPLAASVLQPLINTANT 251
Query: 360 RHTDLDLSSLYFMTSRPC-------TIAGIPCTLTRAGYTGEDGVEISVPGEQCT----H 408
++ DLS+LYF R ++ P ++R GYTGEDG EIS+P
Sbjct: 252 PASETDLSTLYFGNCRELYLTLPDGSVTAHPLLISRTGYTGEDGFEISIPTSGAASLPRQ 311
Query: 409 IVEALLSDED-VKLAGLGARDSL 430
+ E LL+D +LAGL ARDSL
Sbjct: 312 VTELLLADSSKSRLAGLAARDSL 334
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
Query: 12 GKRRRE--TGGFPGASIIQSQIKS--GVSRKRTGFT-STGVPIRPGYEIFN----ANDQR 62
G+ RR+ T F GAS+I SQ+ S + R+R G + G P R G + + AN
Sbjct: 363 GRDRRDPTTATFNGASVILSQLASPKTIPRRRVGLSIEKGPPAREGALVVDISDPANPVE 422
Query: 63 VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
VG +TSG PSPSL NIAMGY++ G EL V+VR+K V MP++ S ++ P
Sbjct: 423 VGVVTSGLPSPSLGGANIAMGYVKQGLHTKGTELAVKVRNKVRKATVVGMPWITSKFHRP 482
Query: 122 PK 123
P+
Sbjct: 483 PQ 484
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 22/125 (17%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--------HTDLDLSSLYFMTSRPC 502
RFK + + L+ +R L+A+QGPL++++LQ ++ DLS+LYF R
Sbjct: 212 RFKHGADSLKWEILA--DRALVALQGPLAASVLQPLINTANTPASETDLSTLYFGNCREL 269
Query: 503 -------TIAGIPCTLTRAGYTGEDGVEISVPGEQCT----HIVEALLSDED-VKLAGLG 550
++ P ++R GYTGEDG EIS+P + E LL+D +LAGL
Sbjct: 270 YLTLPDGSVTAHPLLISRTGYTGEDGFEISIPTSGAASLPRQVTELLLADSSKSRLAGLA 329
Query: 551 ARDSL 555
ARDSL
Sbjct: 330 ARDSL 334
>gi|192292739|ref|YP_001993344.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris TIE-1]
gi|192286488|gb|ACF02869.1| glycine cleavage system T protein [Rhodopseudomonas palustris
TIE-1]
Length = 382
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 144/246 (58%), Gaps = 16/246 (6%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
G + +RTPLY LHL+ GGKMVPFAG+ MPVQY A + HLHTR+ +FDVSHM
Sbjct: 4 GDDTQSLKRTPLYALHLARGGKMVPFAGYDMPVQY-APGVLKEHLHTRNAAGLFDVSHMG 62
Query: 250 QTVVTGKHRE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSL 304
Q + K + LE++ D+ L PG+ + FTNE GGI DDL+VT L D L
Sbjct: 63 QIELRAKSGKLEDAARALEALIPQDIVALPPGRQRYAQFTNESGGILDDLMVTN-LGDRL 121
Query: 305 FLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL 364
FLV NA+ + D A R + L + L+ +R LIA+QGP + L +
Sbjct: 122 FLVVNAACKTED-----EAHLR-EHLSDACDVTALT--DRALIALQGPKAEAALAKFC-A 172
Query: 365 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
D++ + FM ++ G+PC ++R+GYTGEDG EISVP + + ALL + DV GL
Sbjct: 173 DVAKMKFMDVAELSLDGLPCIVSRSGYTGEDGFEISVPADGAERLATALLDNPDVLPIGL 232
Query: 425 GARDSL 430
GARDSL
Sbjct: 233 GARDSL 238
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + L + D++ + FM ++ G+PC ++R+GYTGEDG EISVP
Sbjct: 152 DRALIALQGPKAEAALAKFC-ADVAKMKFMDVAELSLDGLPCIVSRSGYTGEDGFEISVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + ALL + DV GLGARDSL
Sbjct: 211 ADGAERLATALLDNPDVLPIGLGARDSL 238
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPSL 75
GGF GAS I SQ+ G +R R G G P+R +F + D + VG +TSG PSL
Sbjct: 278 GGFLGASAILSQLDGGTARLRVGLRPEGRAPVRENAPLFASADSAEPVGTVTSGGFGPSL 337
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ A + ++ VR +R+ ++V MPFV + Y
Sbjct: 338 NAPVAMGYLPAALTARDTVVFAEVRGQRLPLRVAVMPFVPNTY 380
>gi|378952492|ref|YP_005209980.1| aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas fluorescens F113]
gi|359762506|gb|AEV64585.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas fluorescens F113]
Length = 374
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 142/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGAGAAKALETLVPVDIIDLPVGMQRYAMFTNENGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + A +G ++ L E R L+A+QGP + T+L R D++ + F
Sbjct: 121 CKDQDLAHLRA------HIGAQCSIEPLF-EARALLALQGPAAVTVLARLAP-DVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFQRVMLLGMDCFISRSGYTGEDGFEISVPAADAEKLARALLAEPEVAAIGLGARDSL 231
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q + GV RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAETVFAQQQGGVKRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +GA+ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGAVCSGGFGPTLGGPLAMGYLDSAYVALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + T+L R D++ + FM + + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EARALLALQGPAAVTVLARLAP-DVAKMTFMQFQRVMLLGMDCFISRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAADAEKLARALLAEPEVAAIGLGARDSL 231
>gi|406602116|emb|CCH46303.1| Aminomethyltransferase [Wickerhamomyces ciferrii]
Length = 391
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 140/239 (58%), Gaps = 13/239 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYDLH+ +G MV FAG+SMPV Y S SH RSK +FDVSHMLQ + G
Sbjct: 15 KKTPLYDLHIKYGADMVDFAGYSMPVLYKGQSHIDSHKWVRSKAGIFDVSHMLQQNLKGD 74
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED-SLFLVSNASRRKV 315
+L+ I +D P L++ N+ GGI DD IVTK +D + ++V+NA R+
Sbjct: 75 DVIPFLDKITPSDFKASKPWANQLTVLLNQDGGIIDDTIVTKHDDDKNFYIVTNAGTREK 134
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
D++ FK+ + ++F + LIA+QGPL+S +LQ T+ DLS +YF S+
Sbjct: 135 DLEF-------FKNESQPFDVKFEQIDN-ALIALQGPLASKVLQNFTNEDLSKIYFGNSK 186
Query: 376 PCTIAG---IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED-VKLAGLGARDSL 430
I G + L R GYTGEDG E+S+P + EALL ++D V+ GL ARDSL
Sbjct: 187 IIKIPGFNNLDIHLARGGYTGEDGFELSIPKDVSIEFTEALLENKDEVRPIGLAARDSL 245
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAG---IPCTLTRAGYTGEDGVEI 524
+ LIA+QGPL+S +LQ T+ DLS +YF S+ I G + L R GYTGEDG E+
Sbjct: 154 DNALIALQGPLASKVLQNFTNEDLSKIYFGNSKIIKIPGFNNLDIHLARGGYTGEDGFEL 213
Query: 525 SVPGEQCTHIVEALLSDED-VKLAGLGARDSL 555
S+P + EALL ++D V+ GL ARDSL
Sbjct: 214 SIPKDVSIEFTEALLENKDEVRPIGLAARDSL 245
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQI--KSGVSRKRTGFTSTGVPIRPGYEIFNAND--QRV 63
+I +R F G+S I Q+ +S V ++R GFTS G R G EI++ D +++
Sbjct: 272 VIAKNRRDPNVNKFNGSSKILGQLADRSLVKQQRVGFTSKGPAPREGTEIYSKEDPEKKI 331
Query: 64 GAITSGCPSPSLKK--NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG SPS + NI Y+E Y K G + V++R+K D + K PF+ SNYY
Sbjct: 332 GVVTSGSLSPSSSERINIGQAYVERGYHKSGTPVLVKIRNKLRDATIAKQPFIPSNYY 389
>gi|447918069|ref|YP_007398637.1| glycine cleavage system T protein [Pseudomonas poae RE*1-1-14]
gi|445201932|gb|AGE27141.1| glycine cleavage system T protein [Pseudomonas poae RE*1-1-14]
Length = 374
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 142/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR +FDVSHM Q ++G +
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTREHAGLFDVSHMGQIRLSGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTNEQGGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAKALESLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R K +G+ ++ L E R L+A+QGP + +L R +++ + FM
Sbjct: 127 -----AHLR-KHIGEQCSIEPLF-EARALLALQGPAAVKVLARLAP-EVTRMTFMQFASV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAANAESLARSLLAETEVQPIGLGARDSL 231
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I SQ ++GV+RKR G P+R G E+ +
Sbjct: 251 IEASLLWAISKARRSEGARAGGFPGAEKIFSQQQTGVTRKRVGLLPQERTPVREGAEVVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G I SG PSL +AMGY++ A++ + E+ VR K+V ++V+KMPFV
Sbjct: 311 EQGSVIGTICSGGFGPSLGGPLAMGYLDNAFTALDTEVSALVRGKKVPLRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + +L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EARALLALQGPAAVKVLARLAP-EVTRMTFMQFASVRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAANAESLARSLLAETEVQPIGLGARDSL 231
>gi|375133458|ref|YP_005049866.1| glycine cleavage system T protein [Vibrio furnissii NCTC 11218]
gi|315182633|gb|ADT89546.1| glycine cleavage system T protein [Vibrio furnissii NCTC 11218]
Length = 381
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 142/232 (61%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + HLHTR +FDVSHM Q + G+
Sbjct: 17 TPLHALHVEVGAKMVPFAGYDMPVQY-ALGVKKEHLHTREAAGLFDVSHMGQLRLHGEGA 75
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ DV +L GK + FTNEQGGI DDL+V L D LF+V NA+ + D++
Sbjct: 76 AAALETLVPVDVVDLAEGKQRYAFFTNEQGGILDDLMVA-NLGDHLFVVVNAACKDQDIN 134
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L + L+ + ++R L+A+QGP ++ +L R ++ + FM +
Sbjct: 135 HLQA------HLPSGVELEII--DDRALLALQGPKAAEVLAR-LQPAVADMLFMDIQQVQ 185
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI C ++R+GYTGEDG EISVP +Q + L + E+V+ GLGARDSL
Sbjct: 186 IDGIDCIVSRSGYTGEDGYEISVPADQAEALARTLTAFEEVEWIGLGARDSL 237
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II SQI + VSRKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 277 GGFPGADIILSQIATKDVSRKRVGLVGQTKAPVREGTELFDADGAKIGLVTSGTAGPTAG 336
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++M Y+ + +G E++ VR K + + V KMPFV YY
Sbjct: 337 VPVSMAYVRADLAAIGTEVFAEVRGKMLPMLVEKMPFVPQRYY 379
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R ++ + FM + I GI C ++R+GYTGEDG EISV
Sbjct: 150 DDRALLALQGPKAAEVLAR-LQPAVADMLFMDIQQVQIDGIDCIVSRSGYTGEDGYEISV 208
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P +Q + L + E+V+ GLGARDSL
Sbjct: 209 PADQAEALARTLTAFEEVEWIGLGARDSL 237
>gi|91225429|ref|ZP_01260551.1| glycine cleavage system protein T2 [Vibrio alginolyticus 12G01]
gi|91189792|gb|EAS76065.1| glycine cleavage system protein T2 [Vibrio alginolyticus 12G01]
Length = 372
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 142/233 (60%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L+ GK + FTNE+GGI DDL+V L D LF+V NA+ + D+
Sbjct: 66 AAAFLETLVPVDIVDLESGKQRYAFFTNEEGGIMDDLMVA-NLGDHLFVVVNAACKAQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L+ + E+R L+A+QGP ++ +L R ++S + FM
Sbjct: 125 AHLQA------HLPSGVELEII--EDRALLAIQGPKAAAVLARFAP-EVSEMLFMDICKV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP ++ + L ++++V+ GLGARDSL
Sbjct: 176 DVLGAECIVSRSGYTGEDGYEISVPADKAEELARKLTAEDEVEWIGLGARDSL 228
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 268 GGFPGADIILKQIETKDVARKRVGLVGQTKAPVREGVELFDADGVKIGVVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + +G E++ VR K + + V KMPFV YY
Sbjct: 328 KPVSMGYVRADLAAIGTEVFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L R ++S + FM + G C ++R+GYTGEDG EISV
Sbjct: 141 EDRALLAIQGPKAAAVLARFAP-EVSEMLFMDICKVDVLGAECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L ++++V+ GLGARDSL
Sbjct: 200 PADKAEELARKLTAEDEVEWIGLGARDSL 228
>gi|167648342|ref|YP_001686005.1| glycine cleavage system T protein [Caulobacter sp. K31]
gi|167350772|gb|ABZ73507.1| glycine cleavage system T protein [Caulobacter sp. K31]
Length = 370
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 137/234 (58%), Gaps = 10/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H++ G +MVPFAG+SMPVQY + HL TR +FDVSHM Q + G
Sbjct: 7 KKTPLYDAHVAAGARMVPFAGYSMPVQY-KDGVLKEHLWTREHAGLFDVSHMGQARLRGA 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + E + AD L PGK ++ N+QGG+ DDL+ + +D LF+V N + + D
Sbjct: 66 NPAKSFEKLVSADYQGLKPGKQRYAVLLNDQGGVIDDLMTARPDDDGLFIVVNGACKDND 125
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
++ K+L + ++ L E+R L+A+QGP ++ +L H + + + FM +
Sbjct: 126 YAIIA------KALEGEATVERL--EDRALLALQGPEAAAVLAAHVP-EAAGMVFMDTAA 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T G ++R+GYTGEDG EISVP + I LL DE VK GLGARDSL
Sbjct: 177 LTAFGTDAIISRSGYTGEDGYEISVPASEAARIWNTLLQDERVKAIGLGARDSL 230
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L H + + + FM + T G ++R+GYTGEDG EISV
Sbjct: 143 EDRALLALQGPEAAAVLAAHVP-EAAGMVFMDTAALTAFGTDAIISRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + I LL DE VK GLGARDSL
Sbjct: 202 PASEAARIWNTLLQDERVKAIGLGARDSL 230
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGC 70
GK RRE G FPGA+ I ++ + R R G P R G EI + VG +TSG
Sbjct: 259 GKSRREAGDFPGAARILKELAGDLKRVRVNLKVLEGAPAREGAEIADETGAVVGVVTSGG 318
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRKV 127
PS IA+G++ PA + VG L V VR K +V PFV + Y +RK+
Sbjct: 319 FGPSYGGAIAIGFVPPALAVVGGTLKVIVRGKPQAAEVVTSPFVPTRY-----VRKI 370
>gi|429332260|ref|ZP_19212990.1| glycine cleavage system T protein [Pseudomonas putida CSV86]
gi|428763091|gb|EKX85276.1| glycine cleavage system T protein [Pseudomonas putida CSV86]
Length = 374
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 141/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q + G +
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTREQAGLFDVSHMGQIRLRGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FTN+QGGI DDL+V + LFLV NA+ + D+
Sbjct: 67 AAKALESLVPVDIIDLPVGMQRYAMFTNQQGGILDDLMVANLGDGELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G ++ L EER L+A+QGP + +L+R ++ + FM P
Sbjct: 127 -----AHLR-QHIGDQCEIEPLF-EERALLALQGPAAVKVLERLAP-QVAKMTFMQFAPV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP +Q + LL + +V GLGARDSL
Sbjct: 179 QLLGEDCYVSRSGYTGEDGYEISVPADQAETLARRLLDEPEVAAIGLGARDSL 231
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR GGFPGA+ + +Q + GV+RKR G P+R G EI +
Sbjct: 251 VEASLLWAVSKARRADGTRAGGFPGAARVFAQEQEGVARKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G + SG P+L +AMGY++ A S + ++W VR KRV +KV++MPFV
Sbjct: 311 EAGEVIGQVCSGGFGPTLGAPVAMGYLDSARSALDSQVWAIVRGKRVPMKVSRMPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM P + G C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVKVLERLAP-QVAKMTFMQFAPVQLLGEDCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P +Q + LL + +V GLGARDSL
Sbjct: 203 PADQAETLARRLLDEPEVAAIGLGARDSL 231
>gi|398991285|ref|ZP_10694432.1| glycine cleavage system T protein [Pseudomonas sp. GM24]
gi|399016309|ref|ZP_10718533.1| glycine cleavage system T protein [Pseudomonas sp. GM16]
gi|398105595|gb|EJL95685.1| glycine cleavage system T protein [Pseudomonas sp. GM16]
gi|398140870|gb|EJM29817.1| glycine cleavage system T protein [Pseudomonas sp. GM24]
Length = 374
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLSKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTN+ GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAGKALETLVPVDIIDLPVGMQRYAMFTNDNGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D DL Q +G + L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CK--DQDLAHLQQ----HIGDQCTITALF-EERALLALQGPTAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M ++ G+ C ++R+GYTGEDG EISVP + ALL++ +V+ GLGARDSL
Sbjct: 173 MQFNRVSLLGVDCFVSRSGYTGEDGFEISVPAADAEKLARALLAEPEVQAIGLGARDSL 231
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV+RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQNGVARKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGSVCSGGFGPTLGGPLAMGYLDSAYVTLDTPVWAIVRGKKVQMLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM ++ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPTAVTVLARLAP-EVAKMTFMQFNRVSLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V+ GLGARDSL
Sbjct: 203 PAADAEKLARALLAEPEVQAIGLGARDSL 231
>gi|315049913|ref|XP_003174331.1| aminomethyltransferase [Arthroderma gypseum CBS 118893]
gi|311342298|gb|EFR01501.1| aminomethyltransferase [Arthroderma gypseum CBS 118893]
Length = 483
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 150/272 (55%), Gaps = 22/272 (8%)
Query: 181 SGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKV 240
SGL + S + S ++T YD H+ H GKMVPFAG+SMP+QY +S SH TR K
Sbjct: 63 SGLRYASSSSAGESDIKKTQFYDFHIEHKGKMVPFAGYSMPLQYADMSHVESHKWTREKA 122
Query: 241 SVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKT 299
S+FDVSHM+Q + G + L I A + L TLS +E GGI DD +VT+
Sbjct: 123 SLFDVSHMVQHHIIGPGARDLLMKITPASLDSLKDNHSTLSCLLDESSGGIIDDTVVTRL 182
Query: 300 LEDSLFLVSNASRRKVDMDLMVAAQDRFKS----LGKDIHLQFLSAEERGLIAVQGPLSS 355
+S + V+NA RRK D++ + + F++ +D + + + R LIA+QGP S+
Sbjct: 183 GPESFYFVTNAGRRKEDLEFLTKEIEAFRNSQDPSKRDSIINWTILDNRALIALQGPASA 242
Query: 356 TILQ------RHTDLDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVP 402
LQ D DLS+L+F R + + P L +R GYTGEDG EIS+P
Sbjct: 243 NTLQPLIKKETSADADLSTLHFGQCRQLHLNFPDGSSTPSRLLISRTGYTGEDGFEISIP 302
Query: 403 GEQCTH----IVEALLSDEDVKLAGLGARDSL 430
+ + + E L+S DVKLAGL ARDSL
Sbjct: 303 TDTDANLPRRVAELLISSPDVKLAGLAARDSL 334
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 12 GKRRRETGG----FPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQR- 62
GK RR+ F GAS I Q+ S ++R+R GFT G P R G I + D +
Sbjct: 363 GKDRRDPSSPLSKFNGASTILPQLASPAKTLTRRRVGFTVEGGAPAREGAVIVDLADGKT 422
Query: 63 -VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSG PSP+L NIAMGYI+ K G E+ + VR K VT MP+++S +Y
Sbjct: 423 EVGVVTSGLPSPTLGGTNIAMGYIKQGLHKKGTEVGILVRKKLRKATVTPMPWIESKFY 481
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 59/106 (55%), Gaps = 17/106 (16%)
Query: 467 EERGLIAVQGPLSSTILQ------RHTDLDLSSLYFMTSRPCTI-----AGIPCTL--TR 513
+ R LIA+QGP S+ LQ D DLS+L+F R + + P L +R
Sbjct: 229 DNRALIALQGPASANTLQPLIKKETSADADLSTLHFGQCRQLHLNFPDGSSTPSRLLISR 288
Query: 514 AGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EIS+P + + + E L+S DVKLAGL ARDSL
Sbjct: 289 TGYTGEDGFEISIPTDTDANLPRRVAELLISSPDVKLAGLAARDSL 334
>gi|385305709|gb|EIF49663.1| mitochondrial precursor [Dekkera bruxellensis AWRI1499]
Length = 340
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 139/238 (58%), Gaps = 9/238 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLY+ H GGKMVPFAG+SMPV Y S SH TR+ VFDVSHMLQ + G
Sbjct: 28 RTPLYNSHXKLGGKMVPFAGYSMPVIYSGQSHIESHKWTRTHCGVFDVSHMLQHRIVGXK 87
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
++L+++C D L+ + LS+ N +GGI DD IVTK +DS ++V+NA+ R D+
Sbjct: 88 AADFLQTLCPTDFKALNXFQFHLSVILNHEGGIVDDCIVTKHADDSFYMVTNAACRAKDV 147
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + +++ H F E L+A+QGP + ++ ++T +L+ LYF +R
Sbjct: 148 GFITSELEKYXGKSDVKHETF----EGVLLAIQGPEARNVMAKYTRSNLNDLYFGNTRFI 203
Query: 378 TIAGIPCT----LTRAGYTGEDGVEISVPGEQC-THIVEALLSDEDVKLAGLGARDSL 430
+ G + R+GYTGEDG EIS+P + AL+ + +VK GLGARDSL
Sbjct: 204 DLKGFGTDEKFHIARSGYTGEDGFEISIPNTKVGVDFFNALMEEPEVKPIGLGARDSL 261
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT----LTRAGYTGEDGVEISV 526
L+A+QGP + ++ ++T +L+ LYF +R + G + R+GYTGEDG EIS+
Sbjct: 172 LLAIQGPEARNVMAKYTRSNLNDLYFGNTRFIDLKGFGTDEKFHIARSGYTGEDGFEISI 231
Query: 527 PGEQC-THIVEALLSDEDVKLAGLGARDSL 555
P + AL+ + +VK GLGARDSL
Sbjct: 232 PNTKVGVDFFNALMEEPEVKPIGLGARDSL 261
>gi|260770118|ref|ZP_05879051.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
furnissii CIP 102972]
gi|260615456|gb|EEX40642.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
furnissii CIP 102972]
Length = 381
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 142/232 (61%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + HLHTR +FDVSHM Q + G+
Sbjct: 17 TPLHALHVEVGAKMVPFAGYDMPVQY-ALGVKKEHLHTREAAGLFDVSHMGQLRLHGEGA 75
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ DV +L GK + FTNEQGGI DDL+V L D LF+V NA+ + D++
Sbjct: 76 AAALETLVPVDVVDLAEGKQRYAFFTNEQGGILDDLMVA-NLGDHLFVVVNAACKDQDIN 134
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L + L+ + ++R L+A+QGP ++ +L R ++ + FM +
Sbjct: 135 HLQA------HLPSGVELEIV--DDRALLALQGPKAAEVLAR-LQPAVADMLFMDIQQVQ 185
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI C ++R+GYTGEDG EISVP +Q + L + E+V+ GLGARDSL
Sbjct: 186 IDGIDCIVSRSGYTGEDGYEISVPADQAEALARTLTAFEEVEWIGLGARDSL 237
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II SQI + VSRKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 277 GGFPGADIILSQIATKDVSRKRVGLVGQTKAPVREGTELFDADGVKIGLVTSGTAGPTAG 336
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++M Y+ + +G E++ VR K + + V KMPFV YY
Sbjct: 337 IPVSMAYVRADLAAIGTEVFAEVRGKMLPMLVEKMPFVPQRYY 379
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R ++ + FM + I GI C ++R+GYTGEDG EISV
Sbjct: 150 DDRALLALQGPKAAEVLAR-LQPAVADMLFMDIQQVQIDGIDCIVSRSGYTGEDGYEISV 208
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P +Q + L + E+V+ GLGARDSL
Sbjct: 209 PADQAEALARTLTAFEEVEWIGLGARDSL 237
>gi|388546241|ref|ZP_10149518.1| glycine cleavage system T protein [Pseudomonas sp. M47T1]
gi|388275768|gb|EIK95353.1| glycine cleavage system T protein [Pseudomonas sp. M47T1]
Length = 373
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 140/234 (59%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPL+ LHL G +MVPFAG+ MPVQY + + HLH+R + +FDVSHM Q + G
Sbjct: 6 QQTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHSREQAGLFDVSHMGQIRLVGS 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ LE++ D+ +L G ++FTN+QGGI DDL+V D+LFLV NA+ + D
Sbjct: 65 DAAKALETLVPVDIIDLPAGMQRYAMFTNDQGGILDDLMVANLGNDTLFLVVNAACKDQD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A +G ++ L EER L+A+QGP + T+L R ++ + FM
Sbjct: 125 LAHLRA------HIGDRCQIEPLF-EERALLALQGPAAVTVLTRLAP-QVAQMTFMQFAS 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VQLLGVDCYVSRSGYTGEDGYEISVPAAHADALARRLLAEPEVAAIGLGARDSL 230
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++G++RKR G P+R G EI +
Sbjct: 250 IEASLLWAVSKARRADGVRAGGFPGAEAVFAQQQTGITRKRVGLLPQERTPVREGAEIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G + SG P+L +AMGY++ A++ + +W VR K+V +KV+KMPFV
Sbjct: 310 ESGTIIGTVCSGGFGPTLGGPVAMGYVDSAHAALETPVWAIVRGKKVAMKVSKMPFVAQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R ++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVTVLTRLAP-QVAQMTFMQFASVQLLGVDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHADALARRLLAEPEVAAIGLGARDSL 230
>gi|328871677|gb|EGG20047.1| aminomethyltransferase [Dictyostelium fasciculatum]
Length = 433
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 136/237 (57%), Gaps = 7/237 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L LH G KMV F G+ MP+ Y + H+H R K ++FDVSHM Q + G+
Sbjct: 64 KKTALNKLHRDLGAKMVEFCGWDMPLMY-PTGVLTEHMHCRQKSALFDVSHMGQLRLHGR 122
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R E++ESI VAD+ K LS+FT E GGI DD ++TK DSL++V NA D
Sbjct: 123 DRIEFMESISVADLQAAQENKSKLSVFTTENGGIIDDTMITKK-ADSLYVVVNAGCADKD 181
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M F++ GKD+ ++ + + L+AVQGP + I+ + DLS + FMT
Sbjct: 182 IAHMNNKIAEFRASGKDVAMELMG--DSALVAVQGPETERIVSQVLGRDLSKMEFMTQMD 239
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED---VKLAGLGARDSL 430
T+ GI +TR GYTGEDG EISVP + LL E VK AGLGARDSL
Sbjct: 240 MTLDGIDLIVTRCGYTGEDGFEISVPNKHAEQFTRMLLDAESGVVVKPAGLGARDSL 296
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I + L KRRRE GGFPGASIIQ Q+K GVS+KR G S G+P+R G I + + +
Sbjct: 316 IEASLAWLITKRRREQGGFPGASIIQQQLKEGVSKKRVGLLS-GIPVREGAVIVDNDGKA 374
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+G ITSG SP K+ I+MGY+ SK G + + +R+K V +V MPFVK+NY
Sbjct: 375 IGKITSGTVSPVTKQYISMGYVPTESSKAGSNVTITIRNKPVKGEVVVMPFVKTNY 430
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
Query: 440 VPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 499
+ H + K++ F++ GKD+ ++ + + L+AVQGP + I+ + DLS + FMT
Sbjct: 182 IAHMNNKIAE--FRASGKDVAMELMG--DSALVAVQGPETERIVSQVLGRDLSKMEFMTQ 237
Query: 500 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED---VKLAGLGARDSL 555
T+ GI +TR GYTGEDG EISVP + LL E VK AGLGARDSL
Sbjct: 238 MDMTLDGIDLIVTRCGYTGEDGFEISVPNKHAEQFTRMLLDAESGVVVKPAGLGARDSL 296
>gi|149187585|ref|ZP_01865882.1| glycine cleavage system protein T2 [Vibrio shilonii AK1]
gi|148838465|gb|EDL55405.1| glycine cleavage system protein T2 [Vibrio shilonii AK1]
Length = 377
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 143/233 (61%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLH R +FDVSHM Q + G++
Sbjct: 12 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHCRDAAGLFDVSHMGQVRLYGEN 70
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L GK + FTNE+GGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 71 AAKILESLVPVDIIDLPEGKQRYAFFTNEEGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 129
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + ++ + E+R L+A+QGP ++ +L R +++ + FM R
Sbjct: 130 THLEA------HLTDGVEMEVI--EDRALLALQGPKAAEVLAR-VQPEVADMLFMDVRKL 180
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R+GYTGEDG EISVP + ++L E+V+ GLGARDSL
Sbjct: 181 DINGVECIVSRSGYTGEDGYEISVPSANAEALAKSLTDFEEVEWIGLGARDSL 233
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI++ V+RKR G T P+R G ++F+AND +G +TSG P+
Sbjct: 272 AGGFPGADIILKQIETKDVARKRVGLVGQTKAPVREGAKLFDANDNEIGIVTSGTAGPTA 331
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++M Y+ ++ +G E++ VR K++ + V KMPFV YY
Sbjct: 332 GKPVSMAYVATEFAAIGTEIFADVRGKKLAMTVEKMPFVPQRYY 375
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L R +++ + FM R I G+ C ++R+GYTGEDG EISV
Sbjct: 146 EDRALLALQGPKAAEVLAR-VQPEVADMLFMDVRKLDINGVECIVSRSGYTGEDGYEISV 204
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ++L E+V+ GLGARDSL
Sbjct: 205 PSANAEALAKSLTDFEEVEWIGLGARDSL 233
>gi|451848016|gb|EMD61322.1| hypothetical protein COCSADRAFT_183377 [Cochliobolus sativus
ND90Pr]
Length = 457
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 148/251 (58%), Gaps = 12/251 (4%)
Query: 191 SSPSAEQ---RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
SS +A++ +T LY+LH +G K VPF G+ MPVQY +SI SH TR K S+FDV H
Sbjct: 59 SSQAADEQLGKTGLYELHSKYGAKFVPFGGYLMPVQYSDLSIIDSHNWTREKASLFDVGH 118
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
M+Q +G E +LESI + + L + TLS N GGI DD ++T+ L D ++V
Sbjct: 119 MVQHHFSGPGAEAFLESITPSALSVLPKHQSTLSTLLNSNGGIVDDTVITR-LADRFYVV 177
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD---- 363
+NA R+ D A D +KS D +++ + + +GL+A+QGPLSS IL R D
Sbjct: 178 TNAGCREKDTAYFKAQLDVWKSKHSDQPVEWQTLDGQGLVALQGPLSSEILSRVLDDKSK 237
Query: 364 LDLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDV 419
DL SLYF TI G ++R GYTGEDG EIS+P + + LL + +++
Sbjct: 238 KDLESLYFGQCANATIKGTDAEVLVSRGGYTGEDGFEISIPAYATEAVTQYLLDSAKDEL 297
Query: 420 KLAGLGARDSL 430
+ AGLGARD+L
Sbjct: 298 RFAGLGARDTL 308
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 12 GKRRRETGGFPGASIIQSQIKS-----GVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
GK RR GGF G S++ Q+K GVSR+R G G P R G EI N +++G I
Sbjct: 337 GKERRAKGGFLGDSVVLQQLKKKSEGGGVSRRRVGLVVEGSPAREGAEIVNEAGEKIGNI 396
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
TSGCPSP+LKKNIAMGYI+ K G E+ V VR K+ VTKMPFV S Y+ P
Sbjct: 397 TSGCPSPTLKKNIAMGYIQDGMHKAGTEVDVVVRGKKRKAVVTKMPFVPSKYFKQP 452
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 69/119 (57%), Gaps = 8/119 (6%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD----LDLSSLYFMTSR 500
K D +KS D +++ + + +GL+A+QGPLSS IL R D DL SLYF
Sbjct: 190 FKAQLDVWKSKHSDQPVEWQTLDGQGLVALQGPLSSEILSRVLDDKSKKDLESLYFGQCA 249
Query: 501 PCTIAGIPCTL--TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TI G + +R GYTGEDG EIS+P + + LL + ++++ AGLGARD+L
Sbjct: 250 NATIKGTDAEVLVSRGGYTGEDGFEISIPAYATEAVTQYLLDSAKDELRFAGLGARDTL 308
>gi|443896317|dbj|GAC73661.1| aminomethyl transferase [Pseudozyma antarctica T-34]
Length = 448
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 145/254 (57%), Gaps = 11/254 (4%)
Query: 184 TFVFSPGSSPSAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVS 241
T V S +S A+ +T LYD HL +GGKMVPF G+ MP+ YG V ASH H R+
Sbjct: 61 TAVRSADASAGADSLSKTGLYDFHLKNGGKMVPFGGYLMPLTYGDVGQVASHHHVRTHAG 120
Query: 242 VFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLE 301
+FDV HM+Q G ++L+ + A + + TLS+ +E+GGI DDLI+TK +
Sbjct: 121 LFDVGHMVQHKFEGAGALKFLQHLTPASLTSMPAFSSTLSVLLSEEGGILDDLIITKHAD 180
Query: 302 DSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRH 361
DS ++V+NA R D+ D + +Q + GL+A+QGP ++ +L +
Sbjct: 181 DSFYVVTNAGCRTEDLAWFKKQLDAWTG----DQVQHRVMDGWGLLALQGPTAAKVLSKL 236
Query: 362 T-DLDLSSLYFMTSR--PCTIAG--IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD 416
DLS+L F S P I G + C + RAGYTGEDG EIS+P + E LL+D
Sbjct: 237 AGSFDLSTLTFGKSAFVPLNIGGEKVECHVARAGYTGEDGFEISIPPASTEKVAETLLAD 296
Query: 417 EDVKLAGLGARDSL 430
+V+LAGL ARDSL
Sbjct: 297 SEVQLAGLAARDSL 310
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 66/117 (56%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I + L GK RR G F GA + ++K G R+R G G R G EIF+
Sbjct: 330 IEAALAWCVGKDRRAAGDFLGAERVLRELKEGPPRRRVGLFVDGGIAREGAEIFSPEGAV 389
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSG PSP+L KNIAM ++ + K G +L V +R K D +V KMPFV+S ++
Sbjct: 390 VGRVTSGIPSPTLGKNIAMALVQNGHHKKGTKLKVEIRKKLRDAEVAKMPFVESKFF 446
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Query: 470 GLIAVQGPLSSTILQRHT-DLDLSSLYFMTSR--PCTIAG--IPCTLTRAGYTGEDGVEI 524
GL+A+QGP ++ +L + DLS+L F S P I G + C + RAGYTGEDG EI
Sbjct: 220 GLLALQGPTAAKVLSKLAGSFDLSTLTFGKSAFVPLNIGGEKVECHVARAGYTGEDGFEI 279
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S+P + E LL+D +V+LAGL ARDSL
Sbjct: 280 SIPPASTEKVAETLLADSEVQLAGLAARDSL 310
>gi|424066300|ref|ZP_17803766.1| glycine cleavage system T protein [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|408002447|gb|EKG42703.1| glycine cleavage system T protein [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 374
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 138/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLDEPEVAPIGLGARDSL 231
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVS+KR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR K+V + V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLAGPLAMGYLHNDYTALDKPVWAMVRGKKVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVTLLGVKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLDEPEVAPIGLGARDSL 231
>gi|302188383|ref|ZP_07265056.1| glycine cleavage system T protein [Pseudomonas syringae pv.
syringae 642]
Length = 374
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 138/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFAGVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ GI C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGIKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVSRKR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGERAGGFPGAERIFAQQQNGVSRKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR KRV + V KMPFV
Sbjct: 311 EQGTVIGTVCSGGFGPSLAGPLAMGYLHSDYTALNTPVWAMVRGKRVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ GI C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFAGVTLLGIKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|398998586|ref|ZP_10701357.1| glycine cleavage system T protein [Pseudomonas sp. GM21]
gi|398119880|gb|EJM09553.1| glycine cleavage system T protein [Pseudomonas sp. GM21]
Length = 374
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 146/239 (61%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G+ ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGEQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVTKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAEALARSLLAEVEVEAIGLGARDSL 231
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q + GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQGGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGDIIGTVCSGGFGPTLGGPLAMGYVDSAYIAIDTPVWAIVRGKKVPLLVSKMPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVTKMTFMQFARVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAANAEALARSLLAEVEVEAIGLGARDSL 231
>gi|425901089|ref|ZP_18877680.1| aminomethyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883228|gb|EJK99714.1| aminomethyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 374
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 141/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q +TG +
Sbjct: 8 KTPLHSLHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQIRLTGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAQALETLVPVDIIDLPVGMQRYAMFTNENGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 127 -----AHLR-QHIGHLCSIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 179 KLLGVDCFVSRSGYTGEDGFEISVPAADAETLARALLAEPEVAAIGLGARDSL 231
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q +GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAEQVFAQQLNGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGYI+ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEVIGSVCSGGFGPTLGGPLAMGYIDSAYVALDTPVWAIVRGKKVPMLVSKMPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 460 HLQFLSP--EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
HL + P EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYT
Sbjct: 135 HLCSIEPLFEERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRVKLLGVDCFVSRSGYT 193
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 194 GEDGFEISVPAADAETLARALLAEPEVAAIGLGARDSL 231
>gi|365856373|ref|ZP_09396393.1| aminomethyltransferase [Acetobacteraceae bacterium AT-5844]
gi|363718188|gb|EHM01538.1| aminomethyltransferase [Acetobacteraceae bacterium AT-5844]
Length = 377
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 136/232 (58%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH G +MVPFAG++MPVQY A I A HL TR+ ++FDVSHM Q + G+
Sbjct: 20 TPLASLHRELGARMVPFAGYAMPVQYPA-GIMAEHLATRAGAALFDVSHMGQAELHGEGA 78
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E LE + ADV L PGK L T E GGI DD +V L D LFLV NASR+ VD
Sbjct: 79 AEALERLTPADVKILKPGKQKYGLLTTESGGILDDFMVAN-LGDRLFLVLNASRKDVDSA 137
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ AA L + L+ + +R L+A QGP + ++L +S+L FM P
Sbjct: 138 AIEAA------LPAGVTLKRMP--DRALLAFQGPQAVSLLASIAPA-VSALTFMGVAPVE 188
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GIP ++R+GYTGEDGVEISV EQ + LL+ AGLGARDSL
Sbjct: 189 IGGIPTLVSRSGYTGEDGVEISVAAEQAEALARKLLALPGAVPAGLGARDSL 240
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A QGP + ++L +S+L FM P I GIP ++R+GYTGEDGVEISV
Sbjct: 154 DRALLAFQGPQAVSLLASIAPA-VSALTFMGVAPVEIGGIPTLVSRSGYTGEDGVEISVA 212
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
EQ + LL+ AGLGARDSL
Sbjct: 213 AEQAEALARKLLALPGAVPAGLGARDSL 240
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
+ + L+ GKRRR FPGA ++ ++ +G R R G G G+
Sbjct: 260 VEANLVWTIGKRRRTEWNFPGAERVREELDNGPKRLRVGILPDGRQPARGHTPIQVGADV 319
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
VG +TSG PSL AMGY+ ++ G L + VR K ++ PFV Y
Sbjct: 320 VGEVTSGGFGPSLNGPCAMGYVAREHAADGTALDLMVRGKASPARIAATPFVPHRY 375
>gi|330919493|ref|XP_003298639.1| hypothetical protein PTT_09407 [Pyrenophora teres f. teres 0-1]
gi|311328079|gb|EFQ93273.1| hypothetical protein PTT_09407 [Pyrenophora teres f. teres 0-1]
Length = 457
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 166/304 (54%), Gaps = 25/304 (8%)
Query: 191 SSPSAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHM 248
S +AE+ +T LY+LH +G K VPF G+SMPVQY +SI SH TR K S+FDV HM
Sbjct: 60 SETAAEKLGKTGLYELHKKYGAKFVPFGGYSMPVQYSDMSIIDSHNWTREKASLFDVGHM 119
Query: 249 LQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+Q +G E +LESI + + L + TLS + GGI DD +VT+ L D ++V+
Sbjct: 120 VQHHFSGPGAEAFLESITPSSLSSLPKHQSTLSTLLHSTGGIVDDTVVTR-LADKFYVVT 178
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD----L 364
NA R+ D D +K+ D +++ + +GLIA+QGPLSS IL R D
Sbjct: 179 NAGCREKDTAYFKTQLDAWKNSHPDQPVEWKILDGQGLIALQGPLSSEILSRVLDDKSKK 238
Query: 365 DLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVK 420
DL SLYF TI G ++R GYTGEDG EIS+P + + LL ++++++
Sbjct: 239 DLESLYFGQCTHATIKGTDAEVLVSRGGYTGEDGFEISIPAYATEAVTQFLLDSANDELR 298
Query: 421 LAGLGARDSLSGDITL----------NTPVPHG-SLKLSNDRFKS---LGKDIHLQFLSP 466
AGLGARD+L + + TPV G S + DR + LG + LQ L
Sbjct: 299 FAGLGARDTLRLEAGMCLYGHDLDDTTTPVEAGLSWIIGKDRRANGGFLGDSVILQQLKK 358
Query: 467 EERG 470
+ G
Sbjct: 359 KSEG 362
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 12 GKRRRETGGFPGASIIQSQIKS-----GVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
GK RR GGF G S+I Q+K GVSR+R G G P R G EI N +++G I
Sbjct: 337 GKDRRANGGFLGDSVILQQLKKKSEGGGVSRRRVGLIVEGSPAREGAEIINEAGEKIGTI 396
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
TSGCPSP+LKKNI+MGY++ K G E+ V VR K+ VTKMPF+ S YY P
Sbjct: 397 TSGCPSPTLKKNISMGYVKDGMHKAGTEVEVVVRGKKRKAVVTKMPFLPSKYYKQP 452
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 69/119 (57%), Gaps = 8/119 (6%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD----LDLSSLYFMTSR 500
K D +K+ D +++ + +GLIA+QGPLSS IL R D DL SLYF
Sbjct: 190 FKTQLDAWKNSHPDQPVEWKILDGQGLIALQGPLSSEILSRVLDDKSKKDLESLYFGQCT 249
Query: 501 PCTIAGIPCTL--TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TI G + +R GYTGEDG EIS+P + + LL ++++++ AGLGARD+L
Sbjct: 250 HATIKGTDAEVLVSRGGYTGEDGFEISIPAYATEAVTQFLLDSANDELRFAGLGARDTL 308
>gi|407926357|gb|EKG19324.1| Glycine cleavage T-protein [Macrophomina phaseolina MS6]
Length = 470
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/313 (41%), Positives = 167/313 (53%), Gaps = 32/313 (10%)
Query: 189 PGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHM 248
P SS ++ ++TPLYDLH +G K VPF GF MPVQY +S+ SH TR K S+FDVSHM
Sbjct: 64 PYSSEASLEKTPLYDLHAKYGAKFVPFGGFEMPVQYSDLSLAESHNWTREKASLFDVSHM 123
Query: 249 LQTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFLV 307
+Q G +LE I + L TLS L GGI DD I+TK D F+V
Sbjct: 124 VQHYFKGPGAAAFLERITPSSASTLADNTSTLSTLLHPNTGGIVDDTIITKLPGDVFFVV 183
Query: 308 SNASRRKVDMDLMVAAQDRFKS-LGKDIH--LQFLSAEERGLIAVQGPLSSTILQRH--- 361
+NA+ R D + A D F++ G+D + + + RGLIA+QGPL+ IL
Sbjct: 184 TNAACRDKDSAYLSAELDAFQAEHGQDASSAVTWDRLDGRGLIALQGPLAVEILSAALPP 243
Query: 362 TDLDLSSLYFMTSRPCTI---AG--IPCTL-TRAGYTGEDGVEISVPGEQCTHIVEALLS 415
DL++LYF SR T AG IP L +R GYTGEDG EISVPG T + E LLS
Sbjct: 244 ESRDLTTLYFGQSRALTFTLPAGQTIPDVLVSRGGYTGEDGFEISVPGAHTTALAELLLS 303
Query: 416 D---EDVKLAGLGARDSLSGDITL----------NTPVPHGSL-----KLSNDRFKSLGK 457
++ AGLG+RDSL + + TPV G+L K +R G
Sbjct: 304 TGGPSKLRWAGLGSRDSLRLEAGMCLYGHDLDDTTTPV-EGALSWIIPKDRRERGGFHGA 362
Query: 458 DIHLQFLSPEERG 470
D+ L L P+ +G
Sbjct: 363 DVILAQLKPKSKG 375
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 6/113 (5%)
Query: 13 KRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
K RRE GGF GA +I +Q+K +GVSR+R GF G P R G +I + + VG I
Sbjct: 351 KDRRERGGFHGADVILAQLKPKSKGGAGVSRRRVGFIVEGAPAREGADIVDESGASVGTI 410
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
TSGCPSP+LKKNIAMGY++ K G EL V VR + V KMPFV S Y+
Sbjct: 411 TSGCPSPTLKKNIAMGYVKDGLHKAGTELRVVVRGRPRKAVVAKMPFVPSKYW 463
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 60/99 (60%), Gaps = 12/99 (12%)
Query: 469 RGLIAVQGPLSSTILQRH---TDLDLSSLYFMTSRPCTI---AG--IPCTL-TRAGYTGE 519
RGLIA+QGPL+ IL DL++LYF SR T AG IP L +R GYTGE
Sbjct: 223 RGLIALQGPLAVEILSAALPPESRDLTTLYFGQSRALTFTLPAGQTIPDVLVSRGGYTGE 282
Query: 520 DGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
DG EISVPG T + E LLS ++ AGLG+RDSL
Sbjct: 283 DGFEISVPGAHTTALAELLLSTGGPSKLRWAGLGSRDSL 321
>gi|424070946|ref|ZP_17808374.1| glycine cleavage system T protein [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999688|gb|EKG40066.1| glycine cleavage system T protein [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 374
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 138/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLDEPEVAPIGLGARDSL 231
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVS+KR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR K+V + V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLAGPLAMGYLHNDYTALDTPVWAMVRGKKVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVTLLGVKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLDEPEVAPIGLGARDSL 231
>gi|336126158|ref|YP_004578114.1| aminomethyltransferase [Vibrio anguillarum 775]
gi|335343875|gb|AEH35157.1| Aminomethyltransferase [Vibrio anguillarum 775]
Length = 381
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 142/232 (61%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G +
Sbjct: 17 TPLHALHIEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTREAAGLFDVSHMGQLRLHGANA 75
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LES+ D+ +L GK + FTN QGGI DDL+V L+D LF+V NA+ + D+
Sbjct: 76 AQALESLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVA-NLDDHLFVVVNAACKAQDIA 134
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L + + L+ + ++R L+A+QGP ++ +L R + +++FM +
Sbjct: 135 HLQA------HLPQGVELEVI--DDRALLALQGPKAAEVLTR-LQPQVMTMHFMDIQLMD 185
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP EQ + L + E+V+ GLGARDSL
Sbjct: 186 IDGAQCIVSRSGYTGEDGYEISVPAEQAEALARKLTAYEEVEWIGLGARDSL 237
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 14 RRRE---TGGFPGASIIQSQIKS-GVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITS 68
RR E GGFPGA II QI+S V+RKR G T P+R G E+F A+ Q +G +TS
Sbjct: 269 RRAEGERAGGFPGADIILGQIESKDVARKRVGLVGLTKAPVREGTELFAADGQHIGVVTS 328
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G P+ K ++M YI S +G E++ VR K + + V KMPFV YY
Sbjct: 329 GTAGPTAGKPVSMAYIRADLSAIGTEIFADVRGKMLPMVVEKMPFVAQRYY 379
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L R + +++FM + I G C ++R+GYTGEDG EISV
Sbjct: 150 DDRALLALQGPKAAEVLTR-LQPQVMTMHFMDIQLMDIDGAQCIVSRSGYTGEDGYEISV 208
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + L + E+V+ GLGARDSL
Sbjct: 209 PAEQAEALARKLTAYEEVEWIGLGARDSL 237
>gi|260432225|ref|ZP_05786196.1| glycine cleavage system T protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416053|gb|EEX09312.1| glycine cleavage system T protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 365
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYDLH+ GGK+V FAG+ MPVQY + I H R K ++FDVSHM Q ++ G+
Sbjct: 6 RRTPLYDLHVELGGKLVDFAGWEMPVQY-PLGIMGEHKQCREKAALFDVSHMGQVILQGE 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ E LE++C L GK FTNE GGI DDLIV+ D F+V NA+ R D
Sbjct: 65 NVGEKLEALCPQAFATLPEGKARYGFFTNEDGGIMDDLIVSNA-GDHFFVVVNAALRDQD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M A D G ++ F +R L+AVQGP + ++ L FM +
Sbjct: 124 IPHMRAHLD-----GVEVTEIF----DRALVAVQGPKAEDVVGALCPA-ARDLKFMETTV 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R GYTGEDG EIS+P ++ I ALL+ ED + AGLGARDSL
Sbjct: 174 APIDGVECRISRLGYTGEDGYEISIPEDKAIGITRALLAHEDCEPAGLGARDSL 227
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+E GGFPGA IQ ++ G +RK G G P R G ++ + + +G ITSG
Sbjct: 257 KRRKEEGGFPGADRIQRELAEGPARKLVGIKPDGRAPARQGVKVQDLDGNTIGQITSGGF 316
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ +++ G ++ + +R K ++ +PFVK NY
Sbjct: 317 GPTVGGPVAMGYVAAGHTEPGEQVNLIIRGKSQPARIVALPFVKQNY 363
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+AVQGP + ++ L FM + I G+ C ++R GYTGEDG EIS+P
Sbjct: 141 DRALVAVQGPKAEDVVGALCPA-ARDLKFMETTVAPIDGVECRISRLGYTGEDGYEISIP 199
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ I ALL+ ED + AGLGARDSL
Sbjct: 200 EDKAIGITRALLAHEDCEPAGLGARDSL 227
>gi|395650843|ref|ZP_10438693.1| glycine cleavage system T protein [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 374
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 141/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR +FDVSHM Q +TG +
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTRELAGLFDVSHMGQIRLTGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTN+QGGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNDQGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A +G ++ L EER L+A+QGP + +L R +++ + FM
Sbjct: 127 AHLRA------RIGDQCTVEPLF-EERALLALQGPAAVKVLARLAP-EVTRMTFMQFAAL 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAASAETLARSLLAESEVQAIGLGARDSL 231
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVSRKR G P+R G EI +
Sbjct: 251 IEANLLWAISKARRADGARAGGFPGADRIFAQQQTGVSRKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +G + SG PSL +AMGY++ A++ + + VR KRV ++V+KMPFV
Sbjct: 311 ADGSVIGRVCSGGFGPSLGGPLAMGYLDSAFTALDTPVSALVRGKRVALRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVKVLARLAP-EVTRMTFMQFAALRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAASAETLARSLLAESEVQAIGLGARDSL 231
>gi|419955284|ref|ZP_14471414.1| glycine cleavage system T protein [Pseudomonas stutzeri TS44]
gi|387967911|gb|EIK52206.1| glycine cleavage system T protein [Pseudomonas stutzeri TS44]
Length = 371
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 142/234 (60%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ LHL G KMVPFAG+ MPVQY + + HLH R + +FDVSHM Q ++ G
Sbjct: 4 EKTPLHALHLELGAKMVPFAGYDMPVQY-PLGVLKEHLHCREQAGLFDVSHMGQILLHGP 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LES+ D+ +L G ++FT++ GGI DDL+V D LFLV NA+ ++ D
Sbjct: 63 QAAAALESLVPVDIIDLPVGMQRYAMFTDDNGGILDDLMVANLGNDRLFLVVNAACKEQD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A R K +G ++ L E R L+A+QGP ++ +L R +++ + FM
Sbjct: 123 L-----AHLR-KHIGDRCEIESLF-ESRALLALQGPQAAKVLARLAP-EVAQMTFMNFAR 174
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AGI C ++R+GYTGEDG EISVP + ALL++ +V+ GLGARDSL
Sbjct: 175 VAVAGIDCYVSRSGYTGEDGFEISVPTVATEQLARALLAEPEVQPIGLGARDSL 228
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q + GV KR G +P+R G EI +
Sbjct: 248 IDASLLWAISKIRRADGARAGGFPGAERMFAQQRDGVPSKRVGLLPQDRMPVREGAEIVD 307
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +G +TSG PSL +AMGY+ ++ + E+W VR KRV +KV K PFV
Sbjct: 308 ADGNPIGQVTSGGFGPSLGAPLAMGYVTSNHAALDNEVWAVVRGKRVPMKVAKTPFVPQR 367
Query: 118 YY 119
YY
Sbjct: 368 YY 369
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP ++ +L R +++ + FM +AGI C ++R+GYTGEDG EISV
Sbjct: 141 ESRALLALQGPQAAKVLARLAP-EVAQMTFMNFARVAVAGIDCYVSRSGYTGEDGFEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V+ GLGARDSL
Sbjct: 200 PTVATEQLARALLAEPEVQPIGLGARDSL 228
>gi|422638548|ref|ZP_16701979.1| glycine cleavage system T protein [Pseudomonas syringae Cit 7]
gi|330950943|gb|EGH51203.1| glycine cleavage system T protein [Pseudomonas syringae Cit 7]
Length = 374
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 138/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGTDA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLDEPEVAPIGLGARDSL 231
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVS+KR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR KRV + V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLTGPLAMGYLHNDYTALNTSVWAMVRGKRVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVTLLGVKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLDEPEVAPIGLGARDSL 231
>gi|66044346|ref|YP_234187.1| glycine cleavage system T protein [Pseudomonas syringae pv.
syringae B728a]
gi|63255053|gb|AAY36149.1| Glycine cleavage system T protein [Pseudomonas syringae pv.
syringae B728a]
Length = 374
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 138/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ + L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------RHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAQMTFMQFNSVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q +SGVS+KR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAERIFAQQQSGVSKKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR K+V + V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLTGPLAMGYLHNDYTTLNTPVWAMVRGKKVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAQMTFMQFNSVTLLGVKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|229592286|ref|YP_002874405.1| putative glycine cleavage system protein T [Pseudomonas fluorescens
SBW25]
gi|229364152|emb|CAY51794.1| putative aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas fluorescens SBW25]
Length = 374
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 142/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q +TG +
Sbjct: 8 KTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHLHTRDQAGLFDVSHMGQIRLTGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTN QGGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNAQGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G ++ L EER L+A+QGP + +L R +++ + FM
Sbjct: 127 -----AHLR-QHIGDQCSIEPLF-EERALLALQGPAAVKVLARLAP-EVTQMTFMQFASL 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAANAESLARSLLAETEVQAIGLGARDSL 231
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVSRKR G P+R G EI +
Sbjct: 251 IEASLLWAISKARRADGPRAGGFPGADTIFTQQQAGVSRKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +G++ SG P+L +AMGY++ A+ + E+ VR K+V ++V+KMPFV
Sbjct: 311 ADGTVIGSVCSGGFGPTLGGPLAMGYLDSAFIALDTEVSALVRGKKVPLRVSKMPFVPQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVKVLARLAP-EVTQMTFMQFASLRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAANAESLARSLLAETEVQAIGLGARDSL 231
>gi|440744442|ref|ZP_20923745.1| glycine cleavage system T protein [Pseudomonas syringae BRIP39023]
gi|440373860|gb|ELQ10603.1| glycine cleavage system T protein [Pseudomonas syringae BRIP39023]
Length = 374
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 138/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGTDA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTSVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLDEPEVAPIGLGARDSL 231
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVS+KR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR KRV + V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLTGPLAMGYLHNDYTALNTPVWAMVRGKRVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTSVTLLGVKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLDEPEVAPIGLGARDSL 231
>gi|255727144|ref|XP_002548498.1| aminomethyltransferase, mitochondrial precursor [Candida tropicalis
MYA-3404]
gi|240134422|gb|EER33977.1| aminomethyltransferase, mitochondrial precursor [Candida tropicalis
MYA-3404]
Length = 394
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 145/250 (58%), Gaps = 17/250 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ S +TPLY+ H+ GGKMVP+AGF MPV Y + S SH RSKV +FDVSHMLQ
Sbjct: 11 STASNLIKTPLYEAHIELGGKMVPYAGFEMPVLYKSQSHIDSHNWVRSKVGLFDVSHMLQ 70
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+TGK+ + L+ I D+ L +LS+ N +GG+ DD I+TK ED ++V+NA
Sbjct: 71 HKITGKNARKLLQKITPIDLDTLPVNTFSLSVLLNNEGGVIDDCIITKHGEDDFYMVTNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + + F + D E L+A+QGP S ILQ+ T+ DLS +Y
Sbjct: 131 GCRDKDIKFIKSELANFDDVNHDTF-------ESTLLAIQGPKSQEILQKFTNEDLSKIY 183
Query: 371 FMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVP------GEQCTHIVEALLSD--EDVK 420
F ++ ++ I + L R+GYTGEDG E+S+P +Q ++L++D + VK
Sbjct: 184 FGQTKYLNLSPISESVHLARSGYTGEDGFELSIPSSNPQESKQSLEFFKSLINDYPDTVK 243
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 244 AIGLAARDSL 253
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK--SGVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGA 65
+ P RR F GAS I SQ+K S + +R G TS G R +IFN + +G
Sbjct: 280 LIPKTRRESNNEFNGASKILSQLKDKSSFTHRRIGLTSKGPAPREESKIFNEDGTIEIGY 339
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+TSG SP+L N+A YI+ Y K+G + + +R K D K+ K+PFV SN Y P
Sbjct: 340 VTSGSASPTLGGNVAQAYIDKKY-KIGSNIKIEIRGKLRDGKIAKLPFVPSNLYKP 394
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 10/98 (10%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEIS 525
E L+A+QGP S ILQ+ T+ DLS +YF ++ ++ I + L R+GYTGEDG E+S
Sbjct: 156 ESTLLAIQGPKSQEILQKFTNEDLSKIYFGQTKYLNLSPISESVHLARSGYTGEDGFELS 215
Query: 526 VP------GEQCTHIVEALLSD--EDVKLAGLGARDSL 555
+P +Q ++L++D + VK GL ARDSL
Sbjct: 216 IPSSNPQESKQSLEFFKSLINDYPDTVKAIGLAARDSL 253
>gi|401420496|ref|XP_003874737.1| aminomethyltransferase, mitochondrial precursor,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490973|emb|CBZ26237.1| aminomethyltransferase, mitochondrial precursor,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 377
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 138/242 (57%), Gaps = 7/242 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+ HL+ KM F+G+ MP+ YG + + H +TR +FDVSHM Q V G
Sbjct: 6 KKTALHSFHLAQQAKMNAFSGYHMPISYGRLGVLKEHFYTRQVAGIFDVSHMGQYEVRGA 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE+++E + D+ G G LS+ TN QGGI+DD IVTK + D LFLV NA ++ D
Sbjct: 66 DREKFMEHVTPVDLQRTQVGHGALSMLTNAQGGIKDDCIVTK-MADHLFLVLNAGCKEKD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR- 375
+ M + G D+ L L +R LIA+QGP ++ IL D D+ + FM R
Sbjct: 125 VAHMESVLREGAMKGADVQLVLL---DRSLIALQGPQAAEILSEFMD-DVPDMGFMQCRQ 180
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
I G+ +TR GYTGEDG EISV +VE L+S ++AGLGARDSL +
Sbjct: 181 KVNIKGMEVQVTRCGYTGEDGFEISVSNTDAVALVELLMS-RRAEMAGLGARDSLRLEAG 239
Query: 436 LN 437
LN
Sbjct: 240 LN 241
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQ----SQIKSGVSRKRTGFTSTGVPIRPGYEIFNA 58
+ +R + KRR GGF G I+ + K V R R G STG P+
Sbjct: 254 VAARFMWTISKRRMAEGGFIGYEPIKYFRDNASKGAVPRLRVGLVSTG-PVAREKTAIEV 312
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++VG +TSGCPSP LKKNIA+GY++ +K GV++ + VRD+RV +V PFV + Y
Sbjct: 313 GGKQVGEVTSGCPSPCLKKNIAIGYLDRELAKDGVKVDLVVRDRRVAAEVVTPPFVPARY 372
Query: 119 YTPPK 123
Y PK
Sbjct: 373 YRKPK 377
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR-PCTIAGIPCTLTRA 514
G D+ L L +R LIA+QGP ++ IL D D+ + FM R I G+ +TR
Sbjct: 139 GADVQLVLL---DRSLIALQGPQAAEILSEFMD-DVPDMGFMQCRQKVNIKGMEVQVTRC 194
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISV +VE L+S ++AGLGARDSL
Sbjct: 195 GYTGEDGFEISVSNTDAVALVELLMS-RRAEMAGLGARDSL 234
>gi|440740860|ref|ZP_20920333.1| glycine cleavage system T protein [Pseudomonas fluorescens
BRIP34879]
gi|440375739|gb|ELQ12440.1| glycine cleavage system T protein [Pseudomonas fluorescens
BRIP34879]
Length = 374
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 141/232 (60%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR +FDVSHM Q ++G +
Sbjct: 9 TPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTREHAGLFDVSHMGQIRLSGANA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTNEQGGI DDL+V D LFLV NA+ + D+
Sbjct: 68 AKALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELFLVVNAACKDQDL- 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A R K +G+ ++ L E R L+A+QGP + IL R +++ + FM
Sbjct: 127 ----AHLR-KHIGEQCSIEPLF-EARALLALQGPAAVKILARLAP-EVTRMTFMQFASVR 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 180 LLGVDCYVSRSGYTGEDGFEISVPAANAESLARSLLAETEVQPIGLGARDSL 231
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I SQ ++GV+RKR G P+R G E+ +
Sbjct: 251 IEASLLWAVSKARRSDGARAGGFPGAEKIFSQQQTGVTRKRVGLLPQERTPVREGAEVVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G I SG PSL +AMGY++ A++ + +E+ VR K+V ++V+KMPFV
Sbjct: 311 EQGTVIGTICSGGFGPSLGGPLAMGYLDSAFTALDIEVSALVRGKKVPLRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + IL R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EARALLALQGPAAVKILARLAP-EVTRMTFMQFASVRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAANAESLARSLLAETEVQPIGLGARDSL 231
>gi|365891766|ref|ZP_09430147.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. STM 3809]
gi|365332252|emb|CCE02678.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. STM 3809]
Length = 384
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
RTPL+ LH+S GGKMVPFAG+ MPVQY A + HLHTRS +FDVSHM Q + K
Sbjct: 13 HRTPLHALHVSLGGKMVPFAGYEMPVQY-APGVLKEHLHTRSHAGLFDVSHMGQVALLPK 71
Query: 257 HRE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+ LE + D+ + G+ + FTN +GGI DDL+V + L LV NA+
Sbjct: 72 SGKVADAAAALERLVPQDIVGIPAGRQRYAQFTNAEGGILDDLMVAN-FGEHLVLVVNAA 130
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
++ D++L+ L +Q L+ +R L+A+QGP ++++L + + + F
Sbjct: 131 CKEADVNLL------RDGLSDVCEVQPLA--DRALLALQGPKAASVLAKFC-AEAEGMRF 181
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + P + G+ C ++R+GYTGEDG EISVP +Q + EALLSD+DV GLGARDSL
Sbjct: 182 MDAGPRAVDGLACYVSRSGYTGEDGYEISVPADQAEQLAEALLSDKDVLPIGLGARDSL 240
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 92/186 (49%), Gaps = 38/186 (20%)
Query: 376 PCTIAGIPCTLTR-AGYTGEDG-----VEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
P I GIP R A +T +G + ++ GE +V A + DV L RD
Sbjct: 87 PQDIVGIPAGRQRYAQFTNAEGGILDDLMVANFGEHLVLVVNAACKEADVNLL----RDG 142
Query: 430 LSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDL 489
LS D+ P+ +R L+A+QGP ++++L +
Sbjct: 143 LS-DVCEVQPL--------------------------ADRALLALQGPKAASVLAKFC-A 174
Query: 490 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 549
+ + FM + P + G+ C ++R+GYTGEDG EISVP +Q + EALLSD+DV GL
Sbjct: 175 EAEGMRFMDAGPRAVDGLACYVSRSGYTGEDGYEISVPADQAEQLAEALLSDKDVLPIGL 234
Query: 550 GARDSL 555
GARDSL
Sbjct: 235 GARDSL 240
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPS 74
GGFPGA+ I +Q G +R+R G G P+R G +F + + VG +TSG P+
Sbjct: 279 AGGFPGAAKILAQFDGGAARRRVGLRPEGRAPVREGATLFATAGSAEPVGQVTSGGFGPT 338
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ A + + +L+ VR +R+ ++V PFV + Y
Sbjct: 339 LNAPVAMGYVPTALAALDTQLFADVRGQRLPLRVAVTPFVPNTY 382
>gi|422619142|ref|ZP_16687834.1| glycine cleavage system T protein [Pseudomonas syringae pv.
japonica str. M301072]
gi|330899514|gb|EGH30933.1| glycine cleavage system T protein [Pseudomonas syringae pv.
japonica str. M301072]
Length = 374
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKNQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGAKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVS+KR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR KRV + V KMPFV
Sbjct: 311 EQGTVIGTVCSGGFGPSLGGPLAMGYLPNDYTALNTPVWALVRGKRVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVTLLGAKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|254477903|ref|ZP_05091288.1| glycine cleavage system T protein [Ruegeria sp. R11]
gi|214028488|gb|EEB69324.1| glycine cleavage system T protein [Ruegeria sp. R11]
Length = 365
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 140/239 (58%), Gaps = 16/239 (6%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A +RTPLYDLH+ GGKMV FAG+ MPVQY + I H R K ++FDVSHM Q ++
Sbjct: 3 NAPKRTPLYDLHVELGGKMVDFAGWEMPVQY-PMGIMGEHKQCREKAALFDVSHMGQVIL 61
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G++ E LE+IC L GK FTNE+GGI DDLIV+ D F+V NA+ R
Sbjct: 62 RGENVGEKLEAICPQAYATLKEGKARYGFFTNEEGGIMDDLIVSNA-GDHFFVVVNAALR 120
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS--LYF 371
D+ M A + G ++ F +R L+AVQGP + ++ DL ++ L F
Sbjct: 121 HQDIPHMKANLE-----GVEVTEIF----DRALVAVQGPAAENVV---GDLCPAARELKF 168
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + I G+ C ++R GYTGEDG EIS+P I + L+ +D + AGLGARDSL
Sbjct: 169 METVLADIDGVECRISRLGYTGEDGYEISIPDADAVRITKLFLAHDDCEPAGLGARDSL 227
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+E GGFPGA+ IQ ++ G ++K G +G P R EI A +G ITSGC
Sbjct: 257 KRRKEEGGFPGAARIQKELAEGAAKKLVGIKPSGRAPARQHVEIQCAEGNTIGEITSGCF 316
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ + + G ++ + +R K D ++ +PFV NY
Sbjct: 317 GPTVGGPVAMGYVSAGHGEPGEQVKLIIRGKAHDAEIVALPFVTQNY 363
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
+R L+AVQGP + ++ DL ++ L FM + I G+ C ++R GYTGEDG EIS
Sbjct: 141 DRALVAVQGPAAENVV---GDLCPAARELKFMETVLADIDGVECRISRLGYTGEDGYEIS 197
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+P I + L+ +D + AGLGARDSL
Sbjct: 198 IPDADAVRITKLFLAHDDCEPAGLGARDSL 227
>gi|163795042|ref|ZP_02189011.1| hypothetical protein BAL199_09203 [alpha proteobacterium BAL199]
gi|159179861|gb|EDP64388.1| hypothetical protein BAL199_09203 [alpha proteobacterium BAL199]
Length = 367
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 139/232 (59%), Gaps = 13/232 (5%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH S GGKMVPFAG+ MPVQ+ + + + H HTR+K +FDVSHM Q + G
Sbjct: 10 TPLTALHESLGGKMVPFAGYMMPVQF-PLGVLSEHRHTRAKAGLFDVSHMGQLRIDGHDA 68
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ L G+ + FTN GGI DDL+VT D LF+V NA+ ++ D
Sbjct: 69 GSRLETLVPGDIVGLGTGRMRYTQFTNADGGILDDLMVTNA-GDHLFVVVNAACKEADTA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
L+ SLGK + + +R L+A+QGP + +L+ + + FMT
Sbjct: 128 LLKG------SLGKAV----VELPDRALLALQGPAAEGVLKTLAPA-AAEMAFMTYAAMD 176
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AGIPC +TR+GYTGEDG EISVP ++ + E LL+ DV+ GLGARDSL
Sbjct: 177 VAGIPCFVTRSGYTGEDGYEISVPADRAATLAEQLLAHPDVEPIGLGARDSL 228
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGC 70
GKRRRE GGFPGA IQS+I +G +R+R G G P R G EI +A+ + +G +TSG
Sbjct: 257 GKRRREEGGFPGAVRIQSEIANGPARRRVGIKPEGRAPAREGTEITDADGRAIGQVTSGG 316
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PS+ +AMGY+E ++K G + + VR K + +VT++PFV Y
Sbjct: 317 FGPSVDGPVAMGYVETGFAKDGTAVQLVVRGKPMPARVTRLPFVAPGY 364
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
SLGK + + +R L+A+QGP + +L+ + + FMT +AGIPC +TR
Sbjct: 132 SLGKAV----VELPDRALLALQGPAAEGVLKTLAPA-AAEMAFMTYAAMDVAGIPCFVTR 186
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP ++ + E LL+ DV+ GLGARDSL
Sbjct: 187 SGYTGEDGYEISVPADRAATLAEQLLAHPDVEPIGLGARDSL 228
>gi|422665313|ref|ZP_16725185.1| glycine cleavage system T protein [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|443645248|ref|ZP_21129098.1| Glycine cleavage system protein T [Pseudomonas syringae pv.
syringae B64]
gi|330975731|gb|EGH75797.1| glycine cleavage system T protein [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|443285265|gb|ELS44270.1| Glycine cleavage system protein T [Pseudomonas syringae pv.
syringae B64]
Length = 374
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKNQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGAKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVS+KR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR KRV + V KMPFV
Sbjct: 311 EQGTVIGTVCSGGFGPSLAGPLAMGYLPNDYTALNTPVWALVRGKRVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVTLLGAKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|422629776|ref|ZP_16694978.1| glycine cleavage system T protein [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330938936|gb|EGH42435.1| glycine cleavage system T protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 374
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRALAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIETLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q ++GVS+KR G P+R G EI + +G + SG PSL
Sbjct: 270 AGGFPGAERIFAQQQNGVSKKRVGLLPQERTPVREGTEIVDEQGTVIGTVCSGGFGPSLA 329
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ Y+ + +W VR KRV + V KMPFV Y+
Sbjct: 330 GPLAMGYLPNDYTALNTPVWALVRGKRVRMLVAKMPFVAQRYF 372
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVTLLGVKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|440720168|ref|ZP_20900587.1| glycine cleavage system T protein [Pseudomonas syringae BRIP34876]
gi|440726295|ref|ZP_20906549.1| glycine cleavage system T protein [Pseudomonas syringae BRIP34881]
gi|440366204|gb|ELQ03288.1| glycine cleavage system T protein [Pseudomonas syringae BRIP34876]
gi|440366456|gb|ELQ03535.1| glycine cleavage system T protein [Pseudomonas syringae BRIP34881]
Length = 374
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 136/232 (58%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRALAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 ANALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKNQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVS+KR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAERIFAQQQNGVSKKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR KRV + V KMPFV
Sbjct: 311 EQGTVIGTVCSGGFGPSLAGPLAMGYLPNDYTALNTPVWALVRGKRVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVTLLGVKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|126729964|ref|ZP_01745776.1| hypothetical protein SSE37_16338 [Sagittula stellata E-37]
gi|126709344|gb|EBA08398.1| hypothetical protein SSE37_16338 [Sagittula stellata E-37]
Length = 382
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 10/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ T L LH S G KMVPFAG+ MPVQYG + + HLHTR+ +FDVSHM Q V+ G
Sbjct: 19 KETALNGLHRSLGAKMVPFAGYEMPVQYG-LGVMKEHLHTRAAAGLFDVSHMGQVVLRGP 77
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+E LE I D+ L G+ FTN GGI DDL++ + ED LF+V NA+ + D
Sbjct: 78 GLDEALEKIVPVDIAGLPEGRQKYGYFTNADGGIVDDLMIARR-EDHLFVVVNAACKDTD 136
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM AA + + + ++ L E R LIA+QGP + +L H + + FM
Sbjct: 137 LTLMRAALEP-----EGVRVKLL--ENRALIALQGPQAEDVLAEHHPA-VRDMKFMDVVT 188
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EIS+P + V+ LL D V+ GLGARDSL
Sbjct: 189 LPLGGAECWISRSGYTGEDGFEISLPNQSAEAFVKTLLQDARVEPIGLGARDSL 242
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITS 68
GKRR+ GGF GA + Q+ G RKR G G P+R G +F++ + +VG +TS
Sbjct: 271 GKRRKTEGGFEGADYVLGQLADGAKRKRVGLRPEGRAPMRAGVPLFDSENGGAQVGDVTS 330
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
G P++ +AMGY+ ++ G LW VR KR+ V VT +PFV + +
Sbjct: 331 GGFGPTVGGPVAMGYVAADFAGEGTRLWGEVRGKRMAVDVTALPFVPAGF 380
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R LIA+QGP + +L H + + FM + G C ++R+GYTGEDG EIS+
Sbjct: 155 ENRALIALQGPQAEDVLAEHHPA-VRDMKFMDVVTLPLGGAECWISRSGYTGEDGFEISL 213
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + V+ LL D V+ GLGARDSL
Sbjct: 214 PNQSAEAFVKTLLQDARVEPIGLGARDSL 242
>gi|387895323|ref|YP_006325620.1| glycine cleavage system T protein [Pseudomonas fluorescens A506]
gi|387161423|gb|AFJ56622.1| glycine cleavage system T protein [Pseudomonas fluorescens A506]
Length = 374
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 141/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFA + MPVQY + + HLHTR + +FDVSHM Q +TG +
Sbjct: 8 KTPLHALHLELGARMVPFADYDMPVQY-PLGVMKEHLHTREQAGLFDVSHMGQIRLTGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNEQGGI DDL+V D LFLV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNEQGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R +G ++ L EER L+A+QGP + +L R +++ + FM
Sbjct: 127 -----AHLR-THIGDQCTIEPLF-EERALLALQGPAAVKVLARLAP-EVTQMTFMQFATL 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVECYVSRSGYTGEDGFEISVPAANAESLARSLLAETEVQAIGLGARDSL 231
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GV+RKR G P+R G EI +
Sbjct: 251 IEASLLWAISKARRADGARAGGFPGADRIFTQQQTGVARKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A +G++ SG P+L +AMGY++ A+ + E+ VR K+V ++V+KMPFV
Sbjct: 311 AQGTVIGSVCSGGFGPTLGGPLAMGYLDSAFVALDTEVSAMVRGKKVPLRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVKVLARLAP-EVTQMTFMQFATLRLLGVECYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAANAESLARSLLAETEVQAIGLGARDSL 231
>gi|338980917|ref|ZP_08632160.1| Glycine cleavage system T protein [Acidiphilium sp. PM]
gi|338208163|gb|EGO96050.1| Glycine cleavage system T protein [Acidiphilium sp. PM]
Length = 281
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 139/239 (58%), Gaps = 12/239 (5%)
Query: 192 SPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
+ SA PL LH S G +MV FAG+ MPVQY I A HLH R++ ++FDVSHM Q
Sbjct: 2 AESALLTVPLDALHRSLGARMVDFAGYDMPVQY--EGIIAEHLHCRAQAALFDVSHMGQA 59
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
V+ G LE + D+ L PG+ +L N QGGI DDL+V L D L LV NA
Sbjct: 60 VLEGPDAAAALERVVTGDIQGLKPGRQRYTLLMNAQGGIVDDLMVAN-LGDRLLLVLNAG 118
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
R+ VD+ + A SL QF +R L+A+QGP + +L +++++ F
Sbjct: 119 RKNVDVAHIRAHLPATVSLTP----QF----DRALLALQGPEAGAVLASLAP-EVAAMRF 169
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M +R ++GI T+TR+GYTGEDG EI +P + + ALL+D VK AGLGARDSL
Sbjct: 170 MEAREMALSGISVTITRSGYTGEDGFEIGLPAAEAEGLARALLADARVKPAGLGARDSL 228
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 464 LSPE-ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGV 522
L+P+ +R L+A+QGP + +L +++++ FM +R ++GI T+TR+GYTGEDG
Sbjct: 137 LTPQFDRALLALQGPEAGAVLASLAP-EVAAMRFMEAREMALSGISVTITRSGYTGEDGF 195
Query: 523 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EI +P + + ALL+D VK AGLGARDSL
Sbjct: 196 EIGLPAAEAEGLARALLADARVKPAGLGARDSL 228
>gi|146341852|ref|YP_001206900.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium
sp. ORS 278]
gi|146194658|emb|CAL78683.1| glycine cleavage system T-protein (aminomethyltransferase)
[Bradyrhizobium sp. ORS 278]
Length = 385
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 148/245 (60%), Gaps = 16/245 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S S+ RTPL+ LH+S GGKMVPFAG+ MPVQY A + HLHTRS +FDVSHM Q
Sbjct: 8 TSSSSLMRTPLHALHVSLGGKMVPFAGYEMPVQY-APGVLKEHLHTRSHAGLFDVSHMGQ 66
Query: 251 TVVTGKHRE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLF 305
+ K + LE + D+ + G+ + FTN GGI DDL+V + L
Sbjct: 67 VALLPKFGKVADAAAALERLVPQDIVGMSAGRQRYAQFTNADGGILDDLMVAN-FGEHLV 125
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD 365
LV NA+ ++ D+ L+ +D + +Q L+ +R L+A+QGP ++++L + +
Sbjct: 126 LVVNAACKEADIQLL---RDGVSDV---CEVQPLA--DRALLALQGPKAASVLAKFC-AE 176
Query: 366 LSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
+ FM + P + G+ C ++R+GYTGEDG EISVP +Q + EALLSD+DV GLG
Sbjct: 177 AEGMRFMDAGPRAVDGLACYVSRSGYTGEDGYEISVPADQAEQLAEALLSDKDVLPIGLG 236
Query: 426 ARDSL 430
ARDSL
Sbjct: 237 ARDSL 241
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP ++++L + + + FM + P + G+ C ++R+GYTGEDG EISVP
Sbjct: 155 DRALLALQGPKAASVLAKFC-AEAEGMRFMDAGPRAVDGLACYVSRSGYTGEDGYEISVP 213
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+Q + EALLSD+DV GLGARDSL
Sbjct: 214 ADQAEQLAEALLSDKDVLPIGLGARDSL 241
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA+ I +Q G +R+R G G P+R G +F +D + VG +TSG P+
Sbjct: 280 AGGFPGAAKILAQFDGGAARRRVGLRPEGRAPVREGATLFATSDSTEPVGKVTSGGFGPT 339
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ + +L+ VR +R+ ++V PFV + Y
Sbjct: 340 LNAPVAMGYVPTTLAAPDTQLFADVRGQRLPLRVAATPFVPNTY 383
>gi|399009989|ref|ZP_10712368.1| glycine cleavage system T protein [Pseudomonas sp. GM17]
gi|398108013|gb|EJL98000.1| glycine cleavage system T protein [Pseudomonas sp. GM17]
Length = 374
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 140/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q +TG
Sbjct: 8 KTPLHSLHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQIRLTGAK 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+ + D+
Sbjct: 67 ATQALETLVPVDIIDLPVGMQRYAMFTNENGGILDDLMVANLGNDELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 127 -----AHLR-QHIGHLCSIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 179 KLLGVDCFVSRSGYTGEDGFEISVPAADAETLARALLAEPEVAAIGLGARDSL 231
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q +GV RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAEQVFAQQLNGVKRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGYI+ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEVIGSVCSGGFGPTLGGPLAMGYIDSAYVALDTPVWAIVRGKKVPMLVSKMPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 460 HLQFLSP--EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
HL + P EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYT
Sbjct: 135 HLCSIEPLFEERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRVKLLGVDCFVSRSGYT 193
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 194 GEDGFEISVPAADAETLARALLAEPEVAAIGLGARDSL 231
>gi|146306375|ref|YP_001186840.1| glycine cleavage system T protein [Pseudomonas mendocina ymp]
gi|145574576|gb|ABP84108.1| glycine cleavage system T protein [Pseudomonas mendocina ymp]
Length = 374
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR +FDVSHM Q ++ G+H
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTREAAGLFDVSHMGQILLRGEH 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ +L G ++FT+ QGGI DDL+V +D+L+LV NA+ + D+
Sbjct: 67 AARALETLVPVDIIDLPVGLQRYAMFTDAQGGILDDLMVANLGDDTLYLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ K +G+ ++ L EER L+A+QGP + +L R ++S + FM
Sbjct: 127 AHLK------KHIGEQCQIECLF-EERALLALQGPKAVDVLARLAP-EVSKMTFMQVARV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISV +Q + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGSECIVSRSGYTGEDGFEISVAVDQAETLARSLLAEAEVEAIGLGARDSL 231
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G FPGA + Q + GV+RKR G VP+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGERAGNFPGAERVFEQQQKGVARKRVGLLPQERVPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +G + SG P+L +AMGY+ +++ V ++W VR KRV +KV K PFV
Sbjct: 311 ADGTVIGQVCSGGFGPTLGAPVAMGYVNASHTAVDSDVWAVVRGKRVAMKVAKTPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K +G+ ++ L EER L+A+QGP + +L R ++S + FM + G C ++
Sbjct: 131 KHIGEQCQIECLF-EERALLALQGPKAVDVLARLAP-EVSKMTFMQVARVRLLGSECIVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISV +Q + +LL++ +V+ GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVAVDQAETLARSLLAEAEVEAIGLGARDSL 231
>gi|326402221|ref|YP_004282302.1| aminomethyltransferase [Acidiphilium multivorum AIU301]
gi|325049082|dbj|BAJ79420.1| aminomethyltransferase [Acidiphilium multivorum AIU301]
Length = 366
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 138/237 (58%), Gaps = 12/237 (5%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
SA PL LH S G +MV FAG+ MPVQY I A HLH R++ ++FDVSHM Q V+
Sbjct: 4 SALLTVPLDALHRSLGARMVDFAGYDMPVQY--EGIIAEHLHCRAQAALFDVSHMGQAVL 61
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G LE + D+ L PG+ +L N QGGI DDL+V L D L LV NA R+
Sbjct: 62 EGPDAAAALERVVTGDIRGLKPGRQRYTLLMNAQGGIVDDLMVAN-LGDRLLLVLNAGRK 120
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
VD+ + A SL QF +R L+A+QGP + +L +++++ FM
Sbjct: 121 NVDVAHIRAHLPATVSLTP----QF----DRALLALQGPEAGAVLASLAP-EVAAMRFME 171
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+R ++GI T+TR+GYTGEDG EI +P + + ALL+D VK AGLGARDSL
Sbjct: 172 AREMALSGISVTITRSGYTGEDGFEIGLPAAEAEGLARALLADARVKPAGLGARDSL 228
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 464 LSPE-ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGV 522
L+P+ +R L+A+QGP + +L +++++ FM +R ++GI T+TR+GYTGEDG
Sbjct: 137 LTPQFDRALLALQGPEAGAVLASLAP-EVAAMRFMEAREMALSGISVTITRSGYTGEDGF 195
Query: 523 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EI +P + + ALL+D VK AGLGARDSL
Sbjct: 196 EIGLPAAEAEGLARALLADARVKPAGLGARDSL 228
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGC 70
GK R+ F G +++ +G + G + G P+R G E+ +A Q G +TSG
Sbjct: 257 GKTRKMGWDFLGGDAVRAVHDAGPRERLVGLRAEGRAPVRAGAELRDAAGQPAGRVTSGT 316
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PS+ +A+GY+ + L +R + + + V +PFV Y+
Sbjct: 317 FGPSVNGPVALGYVRADCAGDDSTLIAGLRGRDIGITVVPLPFVPHRYH 365
>gi|301099343|ref|XP_002898763.1| aminomethyltransferase [Phytophthora infestans T30-4]
gi|262104836|gb|EEY62888.1| aminomethyltransferase [Phytophthora infestans T30-4]
Length = 406
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 152/242 (62%), Gaps = 17/242 (7%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRS--KVSVFDVSHM 248
S+ ++ ++TPLYDLH+S GGKMVPFAG+SMPVQY A + SHLHTR K S+FDVSHM
Sbjct: 11 SAAASLKKTPLYDLHVSLGGKMVPFAGYSMPVQYQA-GVLQSHLHTREQEKASLFDVSHM 69
Query: 249 LQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
Q +TGK R ++LES+ V D+ L G+ LSL TN+QGGI DD +V++ +D L++V
Sbjct: 70 GQLRITGKDRLQFLESVVVGDLQALGSGEAKLSLITNDQGGIIDDCVVSR-YDDHLYVVV 128
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-HTDLDLS 367
NA + VD+ M + FK D ++ + ++R L+A+QGP + +++ + +++L
Sbjct: 129 NAGNQDVDLVHMHKLSEGFKG---DASIERI--QDRALVALQGPGAVDVVETLNPNVNLK 183
Query: 368 SLYFMTS--RPCTIAG---IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLA 422
L FM P + + LTR GYTGEDG EISV + ALL DE ++A
Sbjct: 184 DLEFMHGVFTPLKLKDGKQVDVILTRCGYTGEDGFEISVLSKDAETFARALLDDE--RVA 241
Query: 423 GL 424
GL
Sbjct: 242 GL 243
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 12 GKRRRETGGFPGASIIQSQIKSG-VSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGC 70
GKRRRE GGFPG SII Q+K+ ++KR GF G R G E+F+A+D VG +TSG
Sbjct: 266 GKRRREEGGFPGHSIIMDQLKNKTATKKRVGFVVDGAAAREGAELFDADDNVVGHVTSGT 325
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
SPSLKK I M Y+ K+G +L V+ R K
Sbjct: 326 FSPSLKKAIGMAYVNKNVGKIGTDLHVKARKK 357
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 467 EERGLIAVQGPLSSTILQR-HTDLDLSSLYFMTS--RPCTIAG---IPCTLTRAGYTGED 520
++R L+A+QGP + +++ + +++L L FM P + + LTR GYTGED
Sbjct: 157 QDRALVALQGPGAVDVVETLNPNVNLKDLEFMHGVFTPLKLKDGKQVDVILTRCGYTGED 216
Query: 521 GVEISVPGEQCTHIVEALLSDEDVKLAGL 549
G EISV + ALL DE ++AGL
Sbjct: 217 GFEISVLSKDAETFARALLDDE--RVAGL 243
>gi|414161984|ref|ZP_11418231.1| glycine cleavage system T protein [Afipia felis ATCC 53690]
gi|410879764|gb|EKS27604.1| glycine cleavage system T protein [Afipia felis ATCC 53690]
Length = 382
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 144/242 (59%), Gaps = 16/242 (6%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S+ +R PL+ LHLS GGK+VPFAG+ MPVQY A + HLHTR+ +FDVSHM Q +
Sbjct: 8 SSLKRVPLHALHLSCGGKVVPFAGYEMPVQY-AAGVLKEHLHTRTSAGLFDVSHMGQIRL 66
Query: 254 TGKH-REE----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
K R E LE + D+ + PG+ +LFTN +GGI DDL+V D LFLV
Sbjct: 67 RPKSGRVEDAAAALERLVPQDILGIAPGRQRYALFTNNEGGILDDLMVAN-FGDELFLVV 125
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D + A L +D + + +R LIA+QGP + +L + D +++
Sbjct: 126 NAACKADDEAHLRA------HLARDC--EIIPLPDRALIALQGPKAVDVLTKF-DTGIAT 176
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM S P T+ IPC ++R+GYTGEDG EISVP +V LL+D V GLGARD
Sbjct: 177 MRFMDSGPRTLLDIPCFVSRSGYTGEDGFEISVPASDAERLVTTLLADAAVLPIGLGARD 236
Query: 429 SL 430
SL
Sbjct: 237 SL 238
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L + D ++++ FM S P T+ IPC ++R+GYTGEDG EISVP
Sbjct: 152 DRALIALQGPKAVDVLTKF-DTGIATMRFMDSGPRTLLDIPCFVSRSGYTGEDGFEISVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+V LL+D V GLGARDSL
Sbjct: 211 ASDAERLVTTLLADAAVLPIGLGARDSL 238
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPSL 75
GGFPGA+ I Q++ G +R G + G P+R G +F ++ ++G +TSG PS+
Sbjct: 278 GGFPGANTILRQLEEGAPSRRVGLKAEGRAPVREGAPLFADASSTNKIGRVTSGGFGPSV 337
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ + G L+ +R +R+ + V K+PFV Y
Sbjct: 338 NGPVAMGYVPTPLATPGTGLFTDLRGQRLPMHVAKLPFVAPTY 380
>gi|389632205|ref|XP_003713755.1| glycine cleavage system T protein [Magnaporthe oryzae 70-15]
gi|351646088|gb|EHA53948.1| glycine cleavage system T protein [Magnaporthe oryzae 70-15]
gi|440489128|gb|ELQ68806.1| aminomethyltransferase, mitochondrial precursor [Magnaporthe oryzae
P131]
Length = 464
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 151/257 (58%), Gaps = 18/257 (7%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
+ GSS +T LYDLH++HGGKMVPFAG+ MPVQY ++S++ASH+ TR K S+FDV H
Sbjct: 66 ASGSSGEVLHKTALYDLHVAHGGKMVPFAGYHMPVQYSSLSVSASHVFTREKASLFDVGH 125
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTL-SLFTNEQGGIQDDLIVTKTLEDSLFL 306
M+Q +G +LE + + V L P G+L +L GGI DD IVT+ ++ ++
Sbjct: 126 MVQRRFSGPGAAAFLERVTPSGVAALKPHHGSLTTLLHRGTGGIVDDTIVTRLDDELFYV 185
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRH----T 362
V+NA R D D A + G + + + GL+A+QGPL+ IL
Sbjct: 186 VTNAGCR--DKDNKYFADELAAWDGATVKHEVMDGW--GLVALQGPLAKDILAEALAEPA 241
Query: 363 DLDLSSLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD 416
++DL +L+F SR I P ++R GYTGEDG EIS+P ++ + +ALL+
Sbjct: 242 EVDLPNLHFGMSRYGRIKLLGMEVSAPLLISRGGYTGEDGFEISIPEDETVAVTQALLTT 301
Query: 417 ---EDVKLAGLGARDSL 430
E ++LAGLGARDSL
Sbjct: 302 GRPERLQLAGLGARDSL 318
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 13 KRRRETGGFPGASIIQSQIKS------GVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGA 65
K RRET GF GA +I Q+ + GV R+R G G P R G +I +++ ++G
Sbjct: 348 KARRETAGFHGAEVILPQLVAKSKGGKGVERRRVGLVVEGAPAREGADIVSSDGATKLGK 407
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
ITSGCPSP+L KNIAMGYI+ K G E+ V VR K VTKMPF+++ Y+
Sbjct: 408 ITSGCPSPTLGKNIAMGYIQDGQHKAGTEVAVLVRGKPRKAVVTKMPFIQTKYW 461
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 13/99 (13%)
Query: 470 GLIAVQGPLSSTILQRH----TDLDLSSLYFMTSRPCTI------AGIPCTLTRAGYTGE 519
GL+A+QGPL+ IL ++DL +L+F SR I P ++R GYTGE
Sbjct: 220 GLVALQGPLAKDILAEALAEPAEVDLPNLHFGMSRYGRIKLLGMEVSAPLLISRGGYTGE 279
Query: 520 DGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
DG EIS+P ++ + +ALL+ E ++LAGLGARDSL
Sbjct: 280 DGFEISIPEDETVAVTQALLTTGRPERLQLAGLGARDSL 318
>gi|90417509|ref|ZP_01225431.1| glycine cleavage system T protein [gamma proteobacterium HTCC2207]
gi|90330662|gb|EAS45946.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2207]
Length = 373
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 140/240 (58%), Gaps = 11/240 (4%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ S +T YD HL+ GGKMVPFAG+ MPVQY + I HLH+R +FDVSHM Q
Sbjct: 2 STDSDISKTVFYDHHLAAGGKMVPFAGYLMPVQYSS-GIMQEHLHSRDNAGLFDVSHMGQ 60
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
++ G+ + LE + D+ L + T + TNEQGG+ DDLIVT+ E++ FL+ NA
Sbjct: 61 IIIEGEGAAQALEKLMPVDLESLGINQQTYATLTNEQGGVMDDLIVTRWAENTFFLIVNA 120
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ D+ + +S D +++L E+GL+A+QG + I+ + + + L
Sbjct: 121 GCKMQDL-------EHIRSHLPDFDIRYLG--EQGLLALQGLHAREIMAELSP-EANKLV 170
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM TI GI C +TR+GYTGEDG EISV + + LLS E V GLGARDSL
Sbjct: 171 FMNGCHSTIDGIDCYITRSGYTGEDGFEISVDPSDALRLADKLLSYELVNWIGLGARDSL 230
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 13 KRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAIT 67
K RR + GGF GA +I QI +GVS+KR GF G P+R G EI + VGAIT
Sbjct: 260 KSRRVDGAKAGGFLGADVILGQIANGVSKKRVGFLVDGRAPVREGAEIVDQAGNVVGAIT 319
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SG P+L+ +AMGY+ ++ +G +L VR + + + V+KMP V+ YY
Sbjct: 320 SGGFGPTLQAPVAMGYVSIEFAALGTQLNALVRGRSLPITVSKMPLVEQRYY 371
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
D +++L E+GL+A+QG + I+ + + + L FM TI GI C +TR+GYT
Sbjct: 136 DFDIRYLG--EQGLLALQGLHAREIMAELSP-EANKLVFMNGCHSTIDGIDCYITRSGYT 192
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISV + + LLS E V GLGARDSL
Sbjct: 193 GEDGFEISVDPSDALRLADKLLSYELVNWIGLGARDSL 230
>gi|330502286|ref|YP_004379155.1| glycine cleavage system T protein [Pseudomonas mendocina NK-01]
gi|328916572|gb|AEB57403.1| glycine cleavage system T protein [Pseudomonas mendocina NK-01]
Length = 374
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 144/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR +FDVSHM Q ++ G++
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTREAAGLFDVSHMGQVLLRGEN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ +L G ++FT+ QGGI DDL+V +D+L+LV NA+ + D+
Sbjct: 67 AARALETLVPVDIIDLPLGTQRYAMFTDAQGGILDDLMVANLGDDTLYLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ K +G+ ++ L EER L+A+QGP ++ +L R ++S + FM
Sbjct: 127 AHLQ------KHIGEQCQIESLF-EERALLALQGPKAAEVLARLAP-EVSKMTFMQVARV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISV +Q + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGSECIVSRSGYTGEDGFEISVAVDQAEALARSLLAEAEVEAIGLGARDSL 231
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G FPGA + Q + GV+RKR G VP+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGERAGNFPGAERVFEQQQKGVARKRVGLLPQERVPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +G ++SG P+L +AMGY+ +++ + ++W VR KRV +KV K PFV
Sbjct: 311 ADGTVIGQVSSGGFGPTLGAPVAMGYVNASHTAIDSDVWAVVRGKRVAMKVAKTPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K +G+ ++ L EER L+A+QGP ++ +L R ++S + FM + G C ++
Sbjct: 131 KHIGEQCQIESLF-EERALLALQGPKAAEVLARLAP-EVSKMTFMQVARVRLLGSECIVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISV +Q + +LL++ +V+ GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVAVDQAEALARSLLAEAEVEAIGLGARDSL 231
>gi|349699611|ref|ZP_08901240.1| glycine cleavage system T protein [Gluconacetobacter europaeus LMG
18494]
Length = 377
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 138/238 (57%), Gaps = 16/238 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLYDLHL G +MVPFAG+ MPVQY A + A HLHTR+K +FDVSHM Q + K
Sbjct: 7 RTPLYDLHLELGARMVPFAGYDMPVQYPA-GVMAEHLHTRAKAGLFDVSHMGQVRIRPKS 65
Query: 258 RE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
+ LE++ AD+ L PG+ ++FT GGI DDL+VT + D L LV NA+
Sbjct: 66 GQVTDAAHALEALVPADIVGLKPGRQRYTVFTTADGGISDDLMVTN-MGDWLLLVVNAAC 124
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D A R +LG + L+ +R LIAVQGP + L D + + FM
Sbjct: 125 KDADF-----AHVR-DALGATCDVDMLA--DRALIAVQGPAAEAALV-ALDPRAAGMRFM 175
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+PC ++R+GYTGEDG EI + + + ALL+ DV GLGARDSL
Sbjct: 176 DVAEMELAGVPCIVSRSGYTGEDGFEIGMANDGALTVARALLAHPDVAPVGLGARDSL 233
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAIT 67
PG R GG+PGA ++ Q+ G +R+R G + G P+R G E+F A Q G +T
Sbjct: 267 PGGAR--AGGYPGAQVVADQLADGTTRRRVGLRAQGRAPVRAGAELFADEAGTQPAGRVT 324
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SG PS+ +AMGY+ ++ VG L+ VR + + V VT +PFV + +
Sbjct: 325 SGAFGPSVGGPVAMGYVAADHATVGTSLFASVRGRLLPVAVTGLPFVAATF 375
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+LG + L+ +R LIAVQGP + L D + + FM +AG+PC ++R
Sbjct: 135 ALGATCDVDMLA--DRALIAVQGPAAEAALV-ALDPRAAGMRFMDVAEMELAGVPCIVSR 191
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EI + + + ALL+ DV GLGARDSL
Sbjct: 192 SGYTGEDGFEIGMANDGALTVARALLAHPDVAPVGLGARDSL 233
>gi|424924537|ref|ZP_18347898.1| glycine cleavage system T protein [Pseudomonas fluorescens R124]
gi|404305697|gb|EJZ59659.1| glycine cleavage system T protein [Pseudomonas fluorescens R124]
Length = 374
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 142/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLSKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNESGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D DL Q +G + L E R L+A+QGP + T+L R +++ + F
Sbjct: 121 CK--DQDLAHLQQ----HIGDQCTITELF-EARALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V+ GLGARDSL
Sbjct: 173 MQFNRVQLLGVDCFVSRSGYTGEDGFEISVPAADAEKLARALLAEPEVQAIGLGARDSL 231
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV+RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQNGVARKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G + SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGGVCSGGFGPTLGGPLAMGYLDSAYVTLDTPVWAIVRGKKVQMLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EARALLALQGPAAVTVLARLAP-EVAKMTFMQFNRVQLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V+ GLGARDSL
Sbjct: 203 PAADAEKLARALLAEPEVQAIGLGARDSL 231
>gi|126740977|ref|ZP_01756660.1| glycine cleavage system T protein [Roseobacter sp. SK209-2-6]
gi|126717903|gb|EBA14622.1| glycine cleavage system T protein [Roseobacter sp. SK209-2-6]
Length = 365
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 139/238 (58%), Gaps = 16/238 (6%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A +RTPLYDLH+ GGKMV FAG+ MPVQY + I H R K ++FDVSHM Q ++
Sbjct: 4 APKRTPLYDLHVELGGKMVDFAGWEMPVQY-PMGIMGEHKQCREKAALFDVSHMGQVILK 62
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G++ E LE++C L GK FTN +GGI DDLIV+ D F+V NA+ R
Sbjct: 63 GENVGEKLETLCPQAYATLKEGKARYGFFTNAEGGIMDDLIVSNA-GDHYFVVVNAALRH 121
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL--DLSSLYFM 372
D+ M A D G ++ F +R L+AVQGP + ++ DL + L FM
Sbjct: 122 QDIPHMQANLD-----GVEVTEIF----DRALVAVQGPAAEGVV---GDLCPAAAELKFM 169
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ I G+ C ++R GYTGEDG EIS+P ++ + + L+ +D + AGLGARDSL
Sbjct: 170 ETTLAEIGGVECRISRLGYTGEDGYEISIPEDKAIEVSKLFLAHDDCEPAGLGARDSL 227
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+E GGFPGA+ IQ ++ G ++K G G P R G EI +GAITSG
Sbjct: 257 KRRKEEGGFPGAARIQKELAEGAAKKLVGIKPEGRAPARQGVEIQCTEGNSIGAITSGSF 316
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ + + G ++ + +R K +V +PFV NY
Sbjct: 317 GPTVGGPVAMGYVSAGHGEPGEKVNLIIRGKAQPAEVVALPFVTQNY 363
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDL--DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
+R L+AVQGP + ++ DL + L FM + I G+ C ++R GYTGEDG EIS
Sbjct: 141 DRALVAVQGPAAEGVV---GDLCPAAAELKFMETTLAEIGGVECRISRLGYTGEDGYEIS 197
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+P ++ + + L+ +D + AGLGARDSL
Sbjct: 198 IPEDKAIEVSKLFLAHDDCEPAGLGARDSL 227
>gi|215259949|gb|ACJ64459.1| mitochondrial aminomethyltransferase [Culex tarsalis]
Length = 291
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 124/179 (69%), Gaps = 3/179 (1%)
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
GK ES+C ADV L G GTL++FTN +GGI DDLIV + +D+L++VSNASR++
Sbjct: 1 GKDVISCFESVCTADVKGLRNGTGTLTVFTNGKGGILDDLIVNRVADDTLYVVSNASRKE 60
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
DM +M A FK+ GKD+ ++FLS++++ L+A+QGP + ++LQ+ DLS L+FM
Sbjct: 61 TDMAVMSDAVANFKAQGKDVSVEFLSSDDQSLLALQGPSAVSVLQKLCTKDLSRLFFMNG 120
Query: 375 RPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 430
IAG+ C +TR GYTGEDGVEIS+P I EALL + ++KLAGLGARDSL
Sbjct: 121 TADQIAGVENCRITRCGYTGEDGVEISIPPRHAPAIAEALLDTKLGNLKLAGLGARDSL 179
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-C 509
FK+ GKD+ ++FLS +++ L+A+QGP + ++LQ+ DLS L+FM IAG+ C
Sbjct: 72 NFKAQGKDVSVEFLSSDDQSLLALQGPSAVSVLQKLCTKDLSRLFFMNGTADQIAGVENC 131
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEIS+P I EALL + ++KLAGLGARDSL
Sbjct: 132 RITRCGYTGEDGVEISIPPRHAPAIAEALLDTKLGNLKLAGLGARDSL 179
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTST--GVPIRPGYEIFNAND 60
+ + LL K+RR FPG+ I +QIK+GV+++R GF + P R E+F+
Sbjct: 199 VEAGLLWLVAKQRRAENNFPGSDKINAQIKNGVTQRRVGFKMSPGSAPARQHVEVFDNEH 258
Query: 61 QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVG 92
Q++G ITSGCPSP L++NIAMGYI KVG
Sbjct: 259 QKIGEITSGCPSPCLQQNIAMGYIREESKKVG 290
>gi|262173541|ref|ZP_06041218.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
mimicus MB-451]
gi|261890899|gb|EEY36886.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
mimicus MB-451]
Length = 376
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 141/232 (60%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + HLHTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHLHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ ++ D+
Sbjct: 70 AAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKEQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVANMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L + E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARRLTNFEEVEWIGLGARDSL 231
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVRGKMLPMTVEKMPFVPQRYY 373
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVANMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L + E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARRLTNFEEVEWIGLGARDSL 231
>gi|325278202|ref|ZP_08143697.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51]
gi|324096663|gb|EGB95014.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51]
Length = 373
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 142/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q ++ G +
Sbjct: 7 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIILHGAN 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LES+ D+ +L G ++FT+ QGGI DDL+V +D LFLV NA+ + D+
Sbjct: 66 AAKALESLVPVDIIDLPVGMQRYAMFTDAQGGILDDLMVANLGDDKLFLVVNAACKAQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A +G +Q L E R L+A+QGP ++ +L R +++++ FM R
Sbjct: 126 AHLQA------QIGNACDVQPLF-EARALLALQGPAAAHVLARLAP-EVANMTFMQLREV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 178 KLLGEDCFVSRSGYTGEDGYEISVPAGAAEALARRLLAEPEVQPIGLGARDSL 230
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 16 RETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPS 74
+ GGFPGA I +Q + GV+RKR G P+R G +I +AND+ VG + SG P+
Sbjct: 267 QRAGGFPGAEAIFTQQRDGVARKRVGLLPQERTPVREGADIVDANDKPVGKVCSGGFGPT 326
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
L +AMGYI+ ++ + L+ VR K+V +KV+KMPFV YY
Sbjct: 327 LGAPVAMGYIDSEHAAIDTALFAVVRGKKVALKVSKMPFVAQRYY 371
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP ++ +L R +++++ FM R + G C ++R+GYTGEDG EISV
Sbjct: 143 EARALLALQGPAAAHVLARLAP-EVANMTFMQLREVKLLGEDCFVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V+ GLGARDSL
Sbjct: 202 PAGAAEALARRLLAEPEVQPIGLGARDSL 230
>gi|408480195|ref|ZP_11186414.1| glycine cleavage system T protein [Pseudomonas sp. R81]
Length = 374
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q +TG +
Sbjct: 8 KTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHLHTRDQAGLFDVSHMGQIRLTGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTN+QGGI DDL+V + LFLV NA+ + D+
Sbjct: 67 AAKALETLVPVDILDLPVGMQRYAMFTNDQGGILDDLMVANLGNEELFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G ++ L EER L+A+QGP + +L R +++ + FM
Sbjct: 127 -----AHLR-QHIGDQCTIEPLF-EERALLALQGPAAVKVLARLAP-EVTKMTFMQFATL 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAANAESLARSLLAETEVQAIGLGARDSL 231
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GVSRKR G P+R G +I +
Sbjct: 251 IEASLLWAISKARRADGARAGGFPGADTIFTQQQAGVSRKRVGLLPQERTPVREGAQIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +G++ SG +L +AMGY++ A+ + E+ VR K+V ++V+KMPFV
Sbjct: 311 ADGTVIGSVCSGGFGSTLGGPLAMGYLDSAFIALDTEVSALVRGKKVPLRVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVKVLARLAP-EVTKMTFMQFATLRLLGVDCYVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +LL++ +V+ GLGARDSL
Sbjct: 203 PAANAESLARSLLAETEVQAIGLGARDSL 231
>gi|388852172|emb|CCF54178.1| probable GCV1-glycine decarboxylase, subunit T, mitochondrial
[Ustilago hordei]
Length = 449
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 143/241 (59%), Gaps = 9/241 (3%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
+ +T LY+ H+ +GGKMVPF G+ MP+ YG V ASH H R+ +FDV HM+Q
Sbjct: 75 SHSKTGLYNFHVKNGGKMVPFGGYLMPLTYGEVGQVASHHHVRTHAGLFDVGHMVQHRFK 134
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G ++L+ + A + + TLS+ +EQGGI DDLI+TK + S ++V+NA R
Sbjct: 135 GPGALKFLQHLTPASLTSMPAFSSTLSVLLSEQGGILDDLIITKHSDGSFYVVTNAGCRT 194
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDLSSLYFMT 373
D+ D +K G +H + + + GL+A+QGP ++ +L++ DL++L F
Sbjct: 195 EDLAWFKKHLDAWK--GDQVHHEVM--DGWGLLALQGPTAAKVLEKLAGSFDLNTLTFGK 250
Query: 374 SR--PCTIAG--IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
S P I + C + RAGYTGEDG EIS+P + EALL+D +V+LAGL ARDS
Sbjct: 251 SAFVPLNINSQQVECHVARAGYTGEDGFEISIPPASTEQVAEALLADGEVQLAGLAARDS 310
Query: 430 L 430
L
Sbjct: 311 L 311
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 65/117 (55%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I + L GK RR F GA + +++ G R+R G G R G EIF+ +
Sbjct: 331 IEAALAWCVGKDRRADADFLGAERVLKELREGPPRRRVGLFVEGGIAREGAEIFSPEGKV 390
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSG PSP+L KNIAM +E K G +L V +R K D +V KMPFV++ ++
Sbjct: 391 VGRVTSGIPSPTLGKNIAMALVENGQHKKGTKLKVEIRKKLRDAQVAKMPFVENKFF 447
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSR--PCTIAG--IPCT 510
G +H + + + GL+A+QGP ++ +L++ DL++L F S P I + C
Sbjct: 209 GDQVHHEVM--DGWGLLALQGPTAAKVLEKLAGSFDLNTLTFGKSAFVPLNINSQQVECH 266
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ RAGYTGEDG EIS+P + EALL+D +V+LAGL ARDSL
Sbjct: 267 VARAGYTGEDGFEISIPPASTEQVAEALLADGEVQLAGLAARDSL 311
>gi|399991152|ref|YP_006564701.1| aminomethyltransferase GcvT [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|398659586|gb|AFO93550.1| aminomethyltransferase GcvT [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 365
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 138/238 (57%), Gaps = 16/238 (6%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A +RTPLYDLH++ GGKMV FAG+ MPVQY + I H R K ++FDVSHM Q ++
Sbjct: 4 APKRTPLYDLHVALGGKMVDFAGWEMPVQY-PMGIMGEHKQCREKAALFDVSHMGQVILR 62
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G + E LE+IC L GK FTNE GGI DDLIV+ D F+V NA+ R
Sbjct: 63 GDNVGEKLEAICPQAYATLKEGKARYGFFTNEDGGIMDDLIVSNA-GDHYFVVVNAALRH 121
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS--LYFM 372
D+ M A D G ++ F +R L+AVQGP + ++ DL ++ + FM
Sbjct: 122 QDIPHMKAHLD-----GVEVTEIF----DRALVAVQGPAAENVV---GDLCPAAREMKFM 169
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ I G+ C L+R GYTGEDG EIS+P I + L+ +D + AGLGARDSL
Sbjct: 170 ETIVADIDGVECRLSRLGYTGEDGYEISIPDADAERITKLFLAHDDCEPAGLGARDSL 227
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+E GGFPGA I+ ++ G ++K G +G P R EI A +G ITSGC
Sbjct: 257 KRRKEEGGFPGADRIRKELADGAAKKLVGIKPSGRAPARQHVEIQCAEGNTIGEITSGCF 316
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ + K G ++ + +R K D ++ +PFV NY
Sbjct: 317 GPTVGGPVAMGYVAAPHGKAGEQVKLIIRGKAHDAEIVALPFVTQNY 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
+R L+AVQGP + ++ DL ++ + FM + I G+ C L+R GYTGEDG EIS
Sbjct: 141 DRALVAVQGPAAENVV---GDLCPAAREMKFMETIVADIDGVECRLSRLGYTGEDGYEIS 197
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+P I + L+ +D + AGLGARDSL
Sbjct: 198 IPDADAERITKLFLAHDDCEPAGLGARDSL 227
>gi|238498416|ref|XP_002380443.1| glycine cleavage system T protein [Aspergillus flavus NRRL3357]
gi|317155663|ref|XP_001825273.2| glycine cleavage system T protein [Aspergillus oryzae RIB40]
gi|220693717|gb|EED50062.1| glycine cleavage system T protein [Aspergillus flavus NRRL3357]
gi|391865322|gb|EIT74606.1| aminomethyl transferase [Aspergillus oryzae 3.042]
Length = 481
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 158/283 (55%), Gaps = 20/283 (7%)
Query: 168 TPPKYFLKFLSFFSGLTFV-FSPGSSPSAEQR-TPLYDLHLSHGGKMVPFAGFSMPVQYG 225
T + FL+ S S V F+ ++PS R T LYDLHL+ G KMVPFAGF MP+QY
Sbjct: 49 TAARPFLRVSSVSSSNGAVRFASSAAPSGPLRQTQLYDLHLARGAKMVPFAGFDMPLQYS 108
Query: 226 AVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTN 285
+S SH TR K S+FDVSHM+Q ++G E L + + + +L + TLS
Sbjct: 109 DLSHVESHKWTREKASLFDVSHMVQHELSGPGAIELLMKVTPSSLDKLGHNQSTLSCLLE 168
Query: 286 E-QGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEER 344
E GGI DD ++T+ +++ + V+NA RR D+ + A +K +++ E+R
Sbjct: 169 EGTGGIIDDTVITRRTDETFYFVTNAGRRDEDLAFLEAEISAYKQAHGADSIKWTILEDR 228
Query: 345 GLIAVQGPLSSTILQRHT-----DLDLSSLYFMTSRPCTI-------AGIPCTLTRAGYT 392
L+A+QGPL++ +LQ + + DLS+LYF R + P ++R GYT
Sbjct: 229 ALVALQGPLAAEVLQSYVHGSGPETDLSTLYFGNCRELYLTLPDGSRTPHPLLISRTGYT 288
Query: 393 GEDGVEISVPGEQC----THIVEALLSDED-VKLAGLGARDSL 430
GEDG EIS+P + E LL++ D V+LAGL ARDSL
Sbjct: 289 GEDGFEISIPTAGSPSLPAQVTELLLTNADQVRLAGLAARDSL 331
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 12 GKRRRE--TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQR--- 62
GK RR+ T F GAS I Q+ S +S++R GFT G P R G I + ND+
Sbjct: 360 GKDRRDPATANFNGASAILPQLASPAKTLSQRRVGFTVEKGSPAREGAVIVDINDESRTP 419
Query: 63 VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG ITSG PSP+L NIAMGY++ K G E+ + VR+K VT MP+V+S +Y
Sbjct: 420 VGIITSGLPSPTLGGTNIAMGYVKQGLHKKGTEVGILVRNKLRKATVTSMPWVESKFY 477
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 17/106 (16%)
Query: 467 EERGLIAVQGPLSSTILQRHT-----DLDLSSLYFMTSRPCTIA-------GIPCTLTRA 514
E+R L+A+QGPL++ +LQ + + DLS+LYF R + P ++R
Sbjct: 226 EDRALVALQGPLAAEVLQSYVHGSGPETDLSTLYFGNCRELYLTLPDGSRTPHPLLISRT 285
Query: 515 GYTGEDGVEISVPGEQC----THIVEALLSDED-VKLAGLGARDSL 555
GYTGEDG EIS+P + E LL++ D V+LAGL ARDSL
Sbjct: 286 GYTGEDGFEISIPTAGSPSLPAQVTELLLTNADQVRLAGLAARDSL 331
>gi|400760282|ref|YP_006589883.1| aminomethyltransferase GcvT [Phaeobacter gallaeciensis 2.10]
gi|398655705|gb|AFO89673.1| aminomethyltransferase GcvT [Phaeobacter gallaeciensis 2.10]
Length = 365
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 138/238 (57%), Gaps = 16/238 (6%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A +RTPLYDLH++ GGKMV FAG+ MPVQY + I H R K ++FDVSHM Q ++
Sbjct: 4 APKRTPLYDLHVALGGKMVDFAGWEMPVQY-PMGIMGEHKQCREKAALFDVSHMGQVILR 62
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G + E LE+IC L GK FTNE GGI DDLIV+ D F+V NA+ R
Sbjct: 63 GDNVGEKLEAICPQAYATLKEGKARYGFFTNEDGGIMDDLIVSNA-GDHYFVVVNAALRH 121
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS--LYFM 372
D+ M A D G ++ F +R L+AVQGP + ++ DL ++ + FM
Sbjct: 122 QDIPHMKAHLD-----GVEVTEIF----DRALVAVQGPAAENVV---GDLCPAAREMKFM 169
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ I G+ C L+R GYTGEDG EIS+P I + L+ +D + AGLGARDSL
Sbjct: 170 ETIVADIDGVECRLSRLGYTGEDGYEISIPDADAERITKLFLAHDDCEPAGLGARDSL 227
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+E GGFPGA IQ ++ G ++K G +G P R EI A +G ITSGC
Sbjct: 257 KRRKEEGGFPGADRIQKELADGAAKKLVGIKPSGRAPARQHVEIQCAEGNTIGEITSGCF 316
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ + K G ++ + +R K D ++ +PFV NY
Sbjct: 317 GPTVGGPVAMGYVAAPHGKAGEQVKLIIRGKAHDAEIVALPFVTQNY 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
+R L+AVQGP + ++ DL ++ + FM + I G+ C L+R GYTGEDG EIS
Sbjct: 141 DRALVAVQGPAAENVV---GDLCPAAREMKFMETIVADIDGVECRLSRLGYTGEDGYEIS 197
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+P I + L+ +D + AGLGARDSL
Sbjct: 198 IPDADAERITKLFLAHDDCEPAGLGARDSL 227
>gi|259488483|tpe|CBF87952.1| TPA: hypothetical glycine cleavage system T protein (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 480
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 161/290 (55%), Gaps = 22/290 (7%)
Query: 160 PFLKSNYHTPP--KYFLKFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAG 217
P ++ +P + + L +G+ + S +SP + ++T LYDLH++ G KMVPFAG
Sbjct: 39 PHVRCALRSPASGRLIARNLPVANGVRYA-SSAASPGSLRKTQLYDLHIAKGAKMVPFAG 97
Query: 218 FSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGK 277
+SMP+QY +S SH TR K S+FDVSHM+Q ++G + L + + + +L+
Sbjct: 98 YSMPLQYSDLSHVESHKWTREKASLFDVSHMVQHRLSGPGALDLLMKVTPSSLDKLENNS 157
Query: 278 GTLS-LFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG---KD 333
TLS L GGI DD ++T+ D+ + V+NA RR D+ + A D FK+ K+
Sbjct: 158 STLSCLLEPGTGGIVDDTVITRLSTDTFYFVTNAGRRDEDLAFLTAEIDAFKAAHGAEKE 217
Query: 334 IHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPC-------TIAG 381
I + LS + LIA+QGP ++ LQ D DLS+LYF R T
Sbjct: 218 ITWEILS--DHSLIALQGPEAAATLQPLIHNNGADSDLSTLYFGNCRSLHLNLPDGTQTQ 275
Query: 382 IPCTLTRAGYTGEDGVEISVPGE-QCTHIVEALLSDEDVKLAGLGARDSL 430
P ++R GYTGEDG EIS+P + I E LL + V+LAGL ARDSL
Sbjct: 276 EPLLISRTGYTGEDGFEISIPPSVSPSTITELLLQNPSVRLAGLAARDSL 325
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 21 FPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQ---RVGAITSGCPSP 73
F GA+ I Q+ S +S++R GFT G P R G I + ND+ ++G ITSG PSP
Sbjct: 369 FNGAATILPQLASPSKNLSQRRVGFTIEKGSPAREGAVIIDLNDESKTQIGVITSGLPSP 428
Query: 74 SLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
SL NIAMGYI+ K G E+ V VR+K V MP+V+S +Y P
Sbjct: 429 SLGGTNIAMGYIKQGLHKKGTEVGVVVRNKVRKATVVGMPWVESKFYRKP 478
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 65/122 (53%), Gaps = 18/122 (14%)
Query: 450 DRFKSLG---KDIHLQFLSPEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRP 501
D FK+ K+I + LS + LIA+QGP ++ LQ D DLS+LYF R
Sbjct: 206 DAFKAAHGAEKEITWEILS--DHSLIALQGPEAAATLQPLIHNNGADSDLSTLYFGNCRS 263
Query: 502 C-------TIAGIPCTLTRAGYTGEDGVEISVPGE-QCTHIVEALLSDEDVKLAGLGARD 553
T P ++R GYTGEDG EIS+P + I E LL + V+LAGL ARD
Sbjct: 264 LHLNLPDGTQTQEPLLISRTGYTGEDGFEISIPPSVSPSTITELLLQNPSVRLAGLAARD 323
Query: 554 SL 555
SL
Sbjct: 324 SL 325
>gi|269104350|ref|ZP_06157046.1| aminomethyltransferase (glycine cleavage system T protein)
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268160990|gb|EEZ39487.1| aminomethyltransferase (glycine cleavage system T protein)
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 372
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 142/233 (60%), Gaps = 13/233 (5%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++H G KMVPFAG+ MPVQY + + HLH R K +FDVSHM Q + G+
Sbjct: 8 TPLNNMHKEAGAKMVPFAGYEMPVQY-PLGVKKEHLHCREKAGLFDVSHMGQIRLIGEEA 66
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE + D+ +L GK +LFTNEQGGI+DDL+VT D L+LV NA+ + D+
Sbjct: 67 AKELEKLVPVDIIDLPVGKQRYALFTNEQGGIEDDLMVT-NFGDCLYLVVNAACKHQDI- 124
Query: 319 LMVAAQDRFKS-LGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+R K L + L+ L E+R L+A+QGP ++ +L + + +S + FM +
Sbjct: 125 ------ERLKQHLAPSVTLEVL--EDRALLALQGPKAAAVLAQ-LNPAVSDMVFMDACRL 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + I L+ E+V+ GLGARDSL
Sbjct: 176 DLLGVECFVSRSGYTGEDGFEISVPNNKVEEIACHLVEFEEVEWIGLGARDSL 228
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKSG-VSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA +I QIK+ + +KR G T P+R G E+ + NDQ +G +TSG PS+
Sbjct: 267 AGGFPGADVILEQIKTKQIVQKRIGLIGLTKAPVREGAELLDENDQVIGTVTSGTYGPSI 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ + M +++ A++ +G+E+W VR K++ V+VTKMPFV NYY
Sbjct: 327 AQPVLMAFVDIAHTDIGMEMWALVRGKKIPVQVTKMPFVAQNYY 370
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 450 DRFKS-LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP 508
+R K L + L+ L E+R L+A+QGP ++ +L + + +S + FM + + G+
Sbjct: 125 ERLKQHLAPSVTLEVL--EDRALLALQGPKAAAVLAQ-LNPAVSDMVFMDACRLDLLGVE 181
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
C ++R+GYTGEDG EISVP + I L+ E+V+ GLGARDSL
Sbjct: 182 CFVSRSGYTGEDGFEISVPNNKVEEIACHLVEFEEVEWIGLGARDSL 228
>gi|258625496|ref|ZP_05720388.1| aminomethyltransferase [Vibrio mimicus VM603]
gi|258582202|gb|EEW07059.1| aminomethyltransferase [Vibrio mimicus VM603]
Length = 416
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 140/232 (60%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + HLHTR +FDVSHM Q + G
Sbjct: 51 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHLHTREAAGLFDVSHMGQLRLYGAQA 109
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ ++ D+
Sbjct: 110 AAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKEQDIA 168
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM +
Sbjct: 169 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLSR-LQPAVANMLFMDVQLLE 219
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 220 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 271
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 299 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 357
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 358 GVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVRGKMLPMTVEKMPFVPQRYY 413
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM + I G C ++R+
Sbjct: 174 LPADVEMEVI--EDRALLALQGPKAAQVLSR-LQPAVANMLFMDVQLLEIDGAECIVSRS 230
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 231 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 271
>gi|312373034|gb|EFR20865.1| hypothetical protein AND_18397 [Anopheles darlingi]
Length = 335
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
Query: 262 LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMV 321
ESIC AD+ L G GTL++FTN GGI DDLIV + +D L++VSNASR+ VDM +
Sbjct: 22 FESICTADIKGLKNGTGTLTVFTNNAGGILDDLIVNRVADDLLYVVSNASRKSVDMANIS 81
Query: 322 AAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAG 381
AA FK+ GKD+ + FLS++++ L+AVQGP + LQ+ DLS L+FM S +IAG
Sbjct: 82 AAVAAFKANGKDVSVDFLSSDDQSLLAVQGPKAVAALQKLCTKDLSRLFFMNSTTDSIAG 141
Query: 382 IP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
+ C +TR GYTGEDGVEIS+P + + I ALL S+ +KLAGLGARDSL
Sbjct: 142 VDGCRITRCGYTGEDGVEISIPSAKASEIAGALLEPSNGQLKLAGLGARDSL 193
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 2/123 (1%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNAND 60
+ + LL K RR FPG+++I +QIK+GV+R+R GF S G P R EI++
Sbjct: 213 VEANLLWLVAKARRVENNFPGSNVINAQIKNGVTRRRVGFKMESGGAPARQHVEIYDNEQ 272
Query: 61 QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
Q+VG ITSGCPSP L++N+AMGYI Y K G E+ ++VRDK VTKMPFV ++YY
Sbjct: 273 QKVGEITSGCPSPCLQQNVAMGYIREEYKKPGTEIMLKVRDKHYHSVVTKMPFVATHYYQ 332
Query: 121 PPK 123
PPK
Sbjct: 333 PPK 335
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FK+ GKD+ + FLS +++ L+AVQGP + LQ+ DLS L+FM S +IAG+ C
Sbjct: 87 FKANGKDVSVDFLSSDDQSLLAVQGPKAVAALQKLCTKDLSRLFFMNSTTDSIAGVDGCR 146
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
+TR GYTGEDGVEIS+P + + I ALL S+ +KLAGLGARDSL
Sbjct: 147 ITRCGYTGEDGVEISIPSAKASEIAGALLEPSNGQLKLAGLGARDSL 193
>gi|451998794|gb|EMD91257.1| hypothetical protein COCHEDRAFT_1135577 [Cochliobolus
heterostrophus C5]
Length = 457
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 161/304 (52%), Gaps = 25/304 (8%)
Query: 191 SSPSAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHM 248
S + EQ +T LY+LH +G K VPF G+ MPVQY +SI SH TR K S+FDV HM
Sbjct: 60 SQAAGEQLGKTGLYELHSKYGAKFVPFGGYLMPVQYSDLSIIDSHNWTREKASLFDVGHM 119
Query: 249 LQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+Q +G E +LE I + + L + TLS N GGI DD ++T+ L D ++V+
Sbjct: 120 VQHHFSGPGAEAFLEGITPSALSTLARHQSTLSTLLNSNGGIVDDTVITR-LADRFYVVT 178
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD----L 364
NA R+ D A D + S D +++ + +GL+A+QGPLSS IL R D
Sbjct: 179 NAGCREKDTAYFKAQLDAWNSKHSDQPVEWQILDGQGLVALQGPLSSEILSRVLDDKSKK 238
Query: 365 DLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVK 420
DL SLYF TI G ++R GYTGEDG EIS+P I + LL + ++++
Sbjct: 239 DLESLYFGQCANATIKGTDAEVLVSRGGYTGEDGFEISIPAYSTEAITQYLLDSAKDELR 298
Query: 421 LAGLGARDSLSGDITL----------NTPVPHG-SLKLSNDRFKS---LGKDIHLQFLSP 466
AGLGARD+L + + TPV G S + DR LG + LQ L
Sbjct: 299 FAGLGARDTLRLEAGMCLYGHDLDDTTTPVEAGLSWIIGKDRRAKGGFLGDSVILQQLKK 358
Query: 467 EERG 470
+ G
Sbjct: 359 KSEG 362
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 12 GKRRRETGGFPGASIIQSQIK-----SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
GK RR GGF G S+I Q+K GVSR+R G G P R G EI N +++G I
Sbjct: 337 GKDRRAKGGFLGDSVILQQLKKKSEGGGVSRRRVGLIVEGSPAREGAEIVNEAGEKIGNI 396
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
TSGCPSP+LKKNIAMGYI+ K G E+ V VR K+ VTKMPFV S Y+ P
Sbjct: 397 TSGCPSPTLKKNIAMGYIQDGMHKAGTEVDVVVRGKKRKAVVTKMPFVPSKYFKQP 452
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 8/119 (6%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD----LDLSSLYFMTSR 500
K D + S D +++ + +GL+A+QGPLSS IL R D DL SLYF
Sbjct: 190 FKAQLDAWNSKHSDQPVEWQILDGQGLVALQGPLSSEILSRVLDDKSKKDLESLYFGQCA 249
Query: 501 PCTIAGIPCTL--TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TI G + +R GYTGEDG EIS+P I + LL + ++++ AGLGARD+L
Sbjct: 250 NATIKGTDAEVLVSRGGYTGEDGFEISIPAYSTEAITQYLLDSAKDELRFAGLGARDTL 308
>gi|399075226|ref|ZP_10751443.1| glycine cleavage system T protein [Caulobacter sp. AP07]
gi|398039396|gb|EJL32533.1| glycine cleavage system T protein [Caulobacter sp. AP07]
Length = 370
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 137/234 (58%), Gaps = 10/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H++ G +MVPFAG+SMPVQY + HL TR +FDVSHM Q + G+
Sbjct: 7 KKTPLYDAHVAAGARMVPFAGYSMPVQYKD-GVLKEHLWTREHAGLFDVSHMGQARLRGE 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + E + AD L PGK ++ N QGG+ DDL+ + +D LF+V N + + D
Sbjct: 66 NPAKSFEKLVSADYQGLKPGKQRYAVLLNAQGGVIDDLMTARPDDDGLFVVVNGACKDND 125
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
++ K+L + ++ L E R L+A+QGP ++ +L H +++ FM +
Sbjct: 126 YAIIA------KTLEGEATVERL--ENRALLALQGPEAAAVLAAHVP-QAATMVFMDTVA 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G+ ++R+GYTGEDG EISVP T I LL+DE VK GLGARDSL
Sbjct: 177 LPAFGVDAIISRSGYTGEDGYEISVPAADATRIWNTLLADERVKPIGLGARDSL 230
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP ++ +L H +++ FM + G+ ++R+GYTGEDG EISV
Sbjct: 143 ENRALLALQGPEAAAVLAAHVP-QAATMVFMDTVALPAFGVDAIISRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P T I LL+DE VK GLGARDSL
Sbjct: 202 PAADATRIWNTLLADERVKPIGLGARDSL 230
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGC 70
GK RRE G + GA I ++ ++R R G P R G +I + VG +TSG
Sbjct: 259 GKSRREAGDYLGADRIAKELAGDLTRVRVNLKVLEGAPAREGAQIADETGAVVGVVTSGG 318
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PS IA+G+ PA + +G +L V VR K +V PFV + Y
Sbjct: 319 FGPSYGGAIAIGFAPPALAVIGTKLKVIVRGKPQAAEVVASPFVPTRY 366
>gi|328849009|gb|EGF98199.1| hypothetical protein MELLADRAFT_51063 [Melampsora larici-populina
98AG31]
Length = 413
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 153/273 (56%), Gaps = 25/273 (9%)
Query: 166 YHTPPKYFLKFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLS--HGGKMVPFAGFSMPVQ 223
+H+ + KF ++ S S S + +RTPLY +H +G KMVPFAGF MP+
Sbjct: 19 FHSIKPHQFKFSTYQSQ-----SQSESNTTLKRTPLYSIHTQPENGAKMVPFAGFEMPLS 73
Query: 224 YGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLF 283
Y + + H+ R+ +FDVSHM+Q+ ++G E+L + A + + P TLS+
Sbjct: 74 Y---TKSGEHMAVRNACGLFDVSHMVQSKISGPSATEFLLKLLPASLKTMKPFTSTLSVM 130
Query: 284 TNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEE 343
NE+GGI DD ++TK + +LV+NA+RR+ D++ + +S I + E
Sbjct: 131 LNEEGGIIDDCMITKWSDQEWYLVTNANRRQRDLNWI---NQHIQSFDAKIEVM----EN 183
Query: 344 RGLIAVQGPLSSTILQRHTDLDLSSL------YFMTSRPCTIAGIPCTLTRAGYTGEDGV 397
GLIA+QGP SS ILQ T LD SSL +F S I GI + R+GYTGEDG
Sbjct: 184 WGLIALQGPKSSEILQ--TLLDDSSLKLNDTFFFGQSVHTEINGIQVHIARSGYTGEDGF 241
Query: 398 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
EIS+P Q I +LL+ V LAGL ARDSL
Sbjct: 242 EISIPPNQSESITSSLLNQPGVTLAGLAARDSL 274
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 20 GFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSL-KK 77
GF G + +I S + R+R G G P R G IFN + VG ITSG PSPSL +
Sbjct: 308 GFLGEERTRKEIGSEIKRRRVGLLIEKGAPARSGAMIFNKKNP-VGVITSGIPSPSLSNQ 366
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
NIAMG++ + + G EL V VRDK KV KMPFV Y+ P
Sbjct: 367 NIAMGFVGVGFHQRGTELKVSVRDKDRTAKVVKMPFVTPKYFKP 410
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSL------YFMTSRPCTIAGIPCTLTRAGYTGED 520
E GLIA+QGP SS ILQ T LD SSL +F S I GI + R+GYTGED
Sbjct: 182 ENWGLIALQGPKSSEILQ--TLLDDSSLKLNDTFFFGQSVHTEINGIQVHIARSGYTGED 239
Query: 521 GVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G EIS+P Q I +LL+ V LAGL ARDSL
Sbjct: 240 GFEISIPPNQSESITSSLLNQPGVTLAGLAARDSL 274
>gi|145239555|ref|XP_001392424.1| glycine cleavage system T protein [Aspergillus niger CBS 513.88]
gi|134076935|emb|CAK45344.1| unnamed protein product [Aspergillus niger]
gi|350629568|gb|EHA17941.1| hypothetical protein ASPNIDRAFT_122951 [Aspergillus niger ATCC
1015]
Length = 482
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 146/252 (57%), Gaps = 18/252 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLHL+ G KMVPFAGFSMP+QY +S SH TR K S+FDVSHM+Q ++G
Sbjct: 82 KKTQLYDLHLARGAKMVPFAGFSMPLQYSDLSHVESHKWTREKASLFDVSHMVQHQLSGP 141
Query: 257 HREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ L + + + +L + TLS L + GGI DD ++T+ +D+ + V+NA RR
Sbjct: 142 GALDLLMKVTPSSLDKLKHNQSTLSCLLEDGTGGIIDDTVITRRTDDTFYFVTNAGRRTE 201
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-----HTDLDLSSLY 370
D+ + A D +K L++ E+R L+A+QGP ++++LQ + DLS+LY
Sbjct: 202 DLAFLQAEIDTYKQAHGPDSLKWEILEDRALVALQGPKAASVLQSLVTPDGANSDLSTLY 261
Query: 371 FMTSRPC-------TIAGIPCTLTRAGYTGEDGVEISVPGEQ----CTHIVEALLSDED- 418
F R T P ++R GYTGEDG EIS+P + E LS+ D
Sbjct: 262 FGNCRELHLTFPDGTTTPQPLLVSRTGYTGEDGFEISIPTASDATLPVRVTELFLSNPDE 321
Query: 419 VKLAGLGARDSL 430
V+LAGL ARDSL
Sbjct: 322 VRLAGLAARDSL 333
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 12 GKRRRE--TGGFPGASIIQSQIKS--GVSRKRTGFT-STGVPIRPGYEIFNANDQ---RV 63
GK RR+ T F GAS I Q+ S +S++R GFT G P R G I + ND+ ++
Sbjct: 362 GKERRDPATANFNGASTILPQVASPKTLSQRRVGFTVEKGSPAREGAIIVDLNDESRTQI 421
Query: 64 GAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
G ITSG PSP+L NIAMGYI+ K G E+ V VR+K VT MP+V+S +Y P
Sbjct: 422 GVITSGLPSPTLGGTNIAMGYIKNGLHKKGTEVGVLVRNKLRKATVTGMPWVESKFYRP 480
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 17/128 (13%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR-----HTDLDLSSLYFMTS 499
L+ D +K L++ E+R L+A+QGP ++++LQ + DLS+LYF
Sbjct: 206 LQAEIDTYKQAHGPDSLKWEILEDRALVALQGPKAASVLQSLVTPDGANSDLSTLYFGNC 265
Query: 500 RPC-------TIAGIPCTLTRAGYTGEDGVEISVPGEQ----CTHIVEALLSDED-VKLA 547
R T P ++R GYTGEDG EIS+P + E LS+ D V+LA
Sbjct: 266 RELHLTFPDGTTTPQPLLVSRTGYTGEDGFEISIPTASDATLPVRVTELFLSNPDEVRLA 325
Query: 548 GLGARDSL 555
GL ARDSL
Sbjct: 326 GLAARDSL 333
>gi|399519804|ref|ZP_10760595.1| aminomethyltransferase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399112201|emb|CCH37154.1| aminomethyltransferase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 374
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 144/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR +FDVSHM Q ++ G++
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTREAAGLFDVSHMGQVLLRGEN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ +L G ++FT+ QGGI DDL+V +D+L+LV NA+ + D+
Sbjct: 67 AARALETLVPVDIIDLPLGTQRYAMFTDAQGGILDDLMVANLGDDTLYLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ K +G+ ++ L EER L+A+QGP ++ +L R ++S + FM
Sbjct: 127 AHLK------KHIGEQCQIESLF-EERALLALQGPKAAEVLARLAP-EVSKMTFMQVARV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISV +Q + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGSECIVSRSGYTGEDGFEISVAVDQAQALARSLLAEVEVEAIGLGARDSL 231
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G FPGA I +Q + GV KR G VP+R G EI +
Sbjct: 251 IEAGLLWAISKVRRADGERAGNFPGAERIFAQQREGVPNKRVGLLPQERVPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +G ++SG PSL +AMGY++ ++ + E+W VR KRV +KV K PFV
Sbjct: 311 ADGNVIGQVSSGGFGPSLGAPVAMGYVKASHMAIDSEVWAVVRGKRVAMKVAKTPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K +G+ ++ L EER L+A+QGP ++ +L R ++S + FM + G C ++
Sbjct: 131 KHIGEQCQIESLF-EERALLALQGPKAAEVLARLAP-EVSKMTFMQVARVRLLGSECIVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISV +Q + +LL++ +V+ GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVAVDQAQALARSLLAEVEVEAIGLGARDSL 231
>gi|67518065|ref|XP_658802.1| hypothetical protein AN1198.2 [Aspergillus nidulans FGSC A4]
gi|40746635|gb|EAA65791.1| hypothetical protein AN1198.2 [Aspergillus nidulans FGSC A4]
Length = 586
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 161/290 (55%), Gaps = 22/290 (7%)
Query: 160 PFLKSNYHTPP--KYFLKFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAG 217
P ++ +P + + L +G+ + S +SP + ++T LYDLH++ G KMVPFAG
Sbjct: 39 PHVRCALRSPASGRLIARNLPVANGVRYA-SSAASPGSLRKTQLYDLHIAKGAKMVPFAG 97
Query: 218 FSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGK 277
+SMP+QY +S SH TR K S+FDVSHM+Q ++G + L + + + +L+
Sbjct: 98 YSMPLQYSDLSHVESHKWTREKASLFDVSHMVQHRLSGPGALDLLMKVTPSSLDKLENNS 157
Query: 278 GTLS-LFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG---KD 333
TLS L GGI DD ++T+ D+ + V+NA RR D+ + A D FK+ K+
Sbjct: 158 STLSCLLEPGTGGIVDDTVITRLSTDTFYFVTNAGRRDEDLAFLTAEIDAFKAAHGAEKE 217
Query: 334 IHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPC-------TIAG 381
I + LS + LIA+QGP ++ LQ D DLS+LYF R T
Sbjct: 218 ITWEILS--DHSLIALQGPEAAATLQPLIHNNGADSDLSTLYFGNCRSLHLNLPDGTQTQ 275
Query: 382 IPCTLTRAGYTGEDGVEISVPGEQC-THIVEALLSDEDVKLAGLGARDSL 430
P ++R GYTGEDG EIS+P + I E LL + V+LAGL ARDSL
Sbjct: 276 EPLLISRTGYTGEDGFEISIPPSVSPSTITELLLQNPSVRLAGLAARDSL 325
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Query: 21 FPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQ---RVGAITSGCPSP 73
F GA+ I Q+ S +S++R GFT G P R G I + ND+ ++G ITSG PSP
Sbjct: 369 FNGAATILPQLASPSKNLSQRRVGFTIEKGSPAREGAVIIDLNDESKTQIGVITSGLPSP 428
Query: 74 SLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
SL NIAMGYI+ K G E+ V VR+K V MP+V++
Sbjct: 429 SLGGTNIAMGYIKQGLHKKGTEVGVVVRNKVRKATVVGMPWVET 472
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 65/122 (53%), Gaps = 18/122 (14%)
Query: 450 DRFKSLG---KDIHLQFLSPEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRP 501
D FK+ K+I + LS + LIA+QGP ++ LQ D DLS+LYF R
Sbjct: 206 DAFKAAHGAEKEITWEILS--DHSLIALQGPEAAATLQPLIHNNGADSDLSTLYFGNCRS 263
Query: 502 C-------TIAGIPCTLTRAGYTGEDGVEISVPGEQC-THIVEALLSDEDVKLAGLGARD 553
T P ++R GYTGEDG EIS+P + I E LL + V+LAGL ARD
Sbjct: 264 LHLNLPDGTQTQEPLLISRTGYTGEDGFEISIPPSVSPSTITELLLQNPSVRLAGLAARD 323
Query: 554 SL 555
SL
Sbjct: 324 SL 325
>gi|393234146|gb|EJD41711.1| glycine cleavage system T protein [Auricularia delicata TFB-10046
SS5]
Length = 377
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 136/235 (57%), Gaps = 2/235 (0%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+D H+S G KMV FAG+SMP+ YG V +SH H R+ +FDV HM+Q+ TG
Sbjct: 5 RKTGLHDFHVSKGAKMVEFAGWSMPLLYGDVGQVSSHNHVRTHAGLFDVGHMVQSFFTGG 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ +LE + + + L TLS+ N GGI DD IVTK ED ++V+NA RR D
Sbjct: 65 SAKAFLERLTPSSIAALPEHGSTLSVLLNPSGGIIDDTIVTKHAEDRFYVVTNAGRRDRD 124
Query: 317 MDLMVAAQDRFKSL-GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ + + S GKD + E+ GL+A+QGP ++ LQ+ D DL+ L+F S
Sbjct: 125 LAWFKEQLEAWNSQEGKDAPVNMEVLEDWGLVALQGPEAAAHLQQFVDADLNQLFFGRSA 184
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ + R GYTGEDG EIS+ + + + L S + AGLGARDSL
Sbjct: 185 YMQLQGMRVHVARGGYTGEDGFEISIEPKDTAKVADVLTSGP-AEWAGLGARDSL 238
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR-VGAITSGC 70
GK RRE F GA+ + ++K+G +R+R G G P R G I++A+ + +G +TSG
Sbjct: 267 GKDRREKADFIGAAGVLEELKNGPARRRVGLIVDGAPAREGCLIYDADGKEPLGNVTSGI 326
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGY++ K G L V VR + VT MPFV + YY
Sbjct: 327 PSPTLGKNIAMGYVKSGAHKKGTPLAVEVRKRMRPATVTPMPFVPAKYY 375
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
GKD + E+ GL+A+QGP ++ LQ+ D DL+ L+F S + G+ + R G
Sbjct: 140 GKDAPVNMEVLEDWGLVALQGPEAAAHLQQFVDADLNQLFFGRSAYMQLQGMRVHVARGG 199
Query: 516 YTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
YTGEDG EIS+ + + + L S + AGLGARDSL
Sbjct: 200 YTGEDGFEISIEPKDTAKVADVLTSGP-AEWAGLGARDSL 238
>gi|422656697|ref|ZP_16719142.1| glycine cleavage system T protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331015229|gb|EGH95285.1| glycine cleavage system T protein [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 374
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q ++G
Sbjct: 8 KTPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLSGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V + L LV NA+ + D+
Sbjct: 67 AAKTLETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELMLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ +I L F E+R L+A+QGP + T+L R +++ + FM
Sbjct: 127 -----AHLRKHLAGRCEIELLF---EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTR 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 178 VTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q +GV +KR G P+R G +I N
Sbjct: 251 IQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAGLLPQERTPVREGTQIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D +G + SG PSL +AMGY+ Y+ + +W VR K+V + VTKMPFV
Sbjct: 311 DQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVRGKKVPMLVTKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
+I L F E+R L+A+QGP + T+L R +++ + FM T+ G C ++R+GYT
Sbjct: 138 EIELLF---EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTRVTLLGAQCYVSRSGYT 193
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 194 GEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|148259070|ref|YP_001233197.1| glycine cleavage system T protein [Acidiphilium cryptum JF-5]
gi|146400751|gb|ABQ29278.1| glycine cleavage system T protein [Acidiphilium cryptum JF-5]
Length = 366
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 138/237 (58%), Gaps = 12/237 (5%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
SA PL LH S G +MV FAG+ MPVQY I A HLH R++ ++FDVSHM Q V+
Sbjct: 4 SALLTVPLDALHRSLGARMVDFAGYDMPVQY--EGIIAEHLHCRAQAALFDVSHMGQAVL 61
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G LE + D+ L PG+ +L N QGGI DDL+V L D L LV NA R+
Sbjct: 62 EGPDAAAALERVVTGDIRGLKPGRQRYTLLMNAQGGIVDDLMVAN-LGDRLLLVLNAGRK 120
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
VD+ + A SL QF +R L+A+QGP + ++ +++++ FM
Sbjct: 121 NVDVAHIRAHLPATVSLTP----QF----DRALLALQGPEAGAVMATLAP-EVAAMRFME 171
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+R ++GI T+TR+GYTGEDG EI +P + + ALL+D VK AGLGARDSL
Sbjct: 172 AREMALSGISVTITRSGYTGEDGFEIGLPAAEAEGLARALLADARVKPAGLGARDSL 228
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 464 LSPE-ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGV 522
L+P+ +R L+A+QGP + ++ +++++ FM +R ++GI T+TR+GYTGEDG
Sbjct: 137 LTPQFDRALLALQGPEAGAVMATLAP-EVAAMRFMEAREMALSGISVTITRSGYTGEDGF 195
Query: 523 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EI +P + + ALL+D VK AGLGARDSL
Sbjct: 196 EIGLPAAEAEGLARALLADARVKPAGLGARDSL 228
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGC 70
GK R+ F G +++ +G + G + G P+R G E+ +A Q G +TSG
Sbjct: 257 GKTRKMGWDFLGGDAVRAVHDAGPRERLVGLRAEGRAPVRAGAELRDAAGQPAGRVTSGT 316
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PS+ +A+GY+ + G L +R + + + V +PFV Y+
Sbjct: 317 FGPSVNGPVALGYVRADCAGDGSTLIAGLRGRDIGITVVPLPFVPHRYH 365
>gi|422671491|ref|ZP_16730857.1| glycine cleavage system T protein [Pseudomonas syringae pv. aceris
str. M302273]
gi|330969231|gb|EGH69297.1| glycine cleavage system T protein [Pseudomonas syringae pv. aceris
str. M302273]
Length = 374
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L L NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLAVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ + L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------RHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAQMTFMQFNNVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q +SGVS+KR G P+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAERIFAQQQSGVSKKRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ Y+ + +W VR K+V + V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLAGPLAMGYLHNDYTTLNTPVWAMVRGKKVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAQMTFMQFNNVTLLGVKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|386401722|ref|ZP_10086500.1| glycine cleavage system T protein [Bradyrhizobium sp. WSM1253]
gi|385742348|gb|EIG62544.1| glycine cleavage system T protein [Bradyrhizobium sp. WSM1253]
Length = 382
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 143/239 (59%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+RTPLYDLH+S GGKMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q +
Sbjct: 11 KRTPLYDLHVSLGGKMVPFAGYDMPVQYPA-GVLKEHLHTRNAAGLFDVSHMGQIALRPR 69
Query: 254 TGKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + LE + D+ + PG+ + FTN +GGI DDL+V D LFLV NA+
Sbjct: 70 SGKVEDAARALERLVPQDILAIAPGRQRYAQFTNAEGGILDDLMVA-NFGDHLFLVVNAA 128
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + A +L + L+ +R LIA+QGP + ++L + + ++ F
Sbjct: 129 CKAEDEAHLRA------NLSDACVIDSLA--DRALIALQGPKAESVLAKLC-AEAPAMKF 179
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M S P +AG+ C ++R+GYTGEDG EISVP + ALL + DV GLGARDSL
Sbjct: 180 MDSGPHKVAGLDCFVSRSGYTGEDGFEISVPAGGAERLARALLDNPDVMPIGLGARDSL 238
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + ++L + + ++ FM S P +AG+ C ++R+GYTGEDG EISVP
Sbjct: 152 DRALIALQGPKAESVLAKLC-AEAPAMKFMDSGPHKVAGLDCFVSRSGYTGEDGFEISVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ ALL + DV GLGARDSL
Sbjct: 211 AGGAERLARALLDNPDVMPIGLGARDSL 238
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPS 74
GGFPGA I + G SR+R G + G P+R G +F + + +G +TSG PS
Sbjct: 277 AGGFPGAEKILAHFDHGASRRRVGLRTEGRAPVREGALLFADATSSEPIGKVTSGGFGPS 336
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ + S + +L+ VR +R+ V++ MPFVK+ Y
Sbjct: 337 LNAPVAMGYVPTSLSALDTKLFAEVRGQRLAVQIAAMPFVKNTY 380
>gi|260773858|ref|ZP_05882773.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
metschnikovii CIP 69.14]
gi|260610819|gb|EEX36023.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
metschnikovii CIP 69.14]
Length = 377
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ +H+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 13 TPLHAVHVELGAKMVPFAGYDMPVQY-PLGVKKEHLHTRQAAGLFDVSHMGQLRLHGVDA 71
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE + DV +L GK ++FTN QGGI DDL+V L D LFLV NA+ + D+
Sbjct: 72 AAALERLVPVDVIDLPVGKQRYAIFTNPQGGILDDLMVA-NLGDHLFLVVNAACKAQDIA 130
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L +HL+ + E+R L+A+QGP ++ IL + ++ + FM +
Sbjct: 131 HLTA------HLPAGVHLEVI--EDRALLALQGPKAAQILAQWQPA-VADMRFMDIQTLA 181
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI C ++R+GYTGEDG EISVP ++ +AL DV+ GLGARDSL
Sbjct: 182 INGIECIVSRSGYTGEDGFEISVPADKAVAFAQALAEHPDVEWIGLGARDSL 233
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QI+S V RKR G T P+R G E+F+++ +VG +TSG P+
Sbjct: 272 AGGFPGAEIILKQIESKQVDRKRVGLVGQTKAPVREGTELFDSDGNKVGIVTSGTVGPTA 331
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++ I+MGY+ + +G EL+ VR K + + + KMPFV YY
Sbjct: 332 EQPISMGYVRADLAVIGHELFAEVRGKMLPMTIEKMPFVPQRYY 375
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTG 518
+HL+ + E+R L+A+QGP ++ IL + ++ + FM + I GI C ++R+GYTG
Sbjct: 140 VHLEVI--EDRALLALQGPKAAQILAQWQPA-VADMRFMDIQTLAINGIECIVSRSGYTG 196
Query: 519 EDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EDG EISVP ++ +AL DV+ GLGARDSL
Sbjct: 197 EDGFEISVPADKAVAFAQALAEHPDVEWIGLGARDSL 233
>gi|449146309|ref|ZP_21777093.1| glycine cleavage system T protein [Vibrio mimicus CAIM 602]
gi|449077989|gb|EMB48939.1| glycine cleavage system T protein [Vibrio mimicus CAIM 602]
Length = 376
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 141/232 (60%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + HLHTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVRKEHLHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ ++ D+
Sbjct: 70 AAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKEQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVTNMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L + E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARRLTNFEEVEWIGLGARDSL 231
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHAALGCEVFAEVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVTNMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L + E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARRLTNFEEVEWIGLGARDSL 231
>gi|302658502|ref|XP_003020954.1| N,N-dimethylglycine oxidase, putative [Trichophyton verrucosum HKI
0517]
gi|291184826|gb|EFE40336.1| N,N-dimethylglycine oxidase, putative [Trichophyton verrucosum HKI
0517]
Length = 483
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 152/272 (55%), Gaps = 22/272 (8%)
Query: 181 SGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKV 240
SGL F S ++ S +RT YD H+ H GKMVPFAG++MP+QY +S SH TR K
Sbjct: 63 SGLRFASSSSAAESDIKRTQFYDFHVEHKGKMVPFAGYAMPLQYADLSHVESHKWTREKA 122
Query: 241 SVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKT 299
S+FDVSHM+Q + G + L I A + L TLS +E GGI DD +VT+
Sbjct: 123 SLFDVSHMVQHHIIGPGARDLLMKITPASLDSLKDNHSTLSCLLDESTGGIVDDTVVTRL 182
Query: 300 LEDSLFLVSNASRRKVDMDLMVAAQDRFKS----LGKDIHLQFLSAEERGLIAVQGPLSS 355
+S + V+NA RRK D++ + + F++ +D + + + R L+A+QGP S+
Sbjct: 183 GPESFYFVTNAGRRKEDLEFLTKEIEAFRNSQDPSKRDSVINWTILDNRALVALQGPASA 242
Query: 356 TILQ------RHTDLDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVP 402
LQ D DLS+L+F R + + P L +R GYTGEDG EIS+P
Sbjct: 243 NALQPLIKKESSADADLSTLHFGQCRQLHLNFPDGSSTPSRLLISRTGYTGEDGFEISIP 302
Query: 403 GEQCTH----IVEALLSDEDVKLAGLGARDSL 430
+ + + E L+S+ DVKLAGL ARDSL
Sbjct: 303 TDSDANLPRRVAELLISNPDVKLAGLAARDSL 334
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 12 GKRRRETGG----FPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQR- 62
GK RR+ F GAS I Q+ S ++R+R GFT G P R G I + D +
Sbjct: 363 GKDRRDPSSPLSKFNGASTILPQLASPAKTLTRRRVGFTVEGGAPAREGAVIVDLADGKT 422
Query: 63 -VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSG PSP+L NIAMGYI+ K G E+ + VR K VT MP+++S +Y
Sbjct: 423 EVGVVTSGLPSPTLGGTNIAMGYIKQGLHKKGTEVGILVRKKLRKATVTPMPWIESKFY 481
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 17/106 (16%)
Query: 467 EERGLIAVQGPLSSTILQ------RHTDLDLSSLYFMTSRPCTI-----AGIPCTL--TR 513
+ R L+A+QGP S+ LQ D DLS+L+F R + + P L +R
Sbjct: 229 DNRALVALQGPASANALQPLIKKESSADADLSTLHFGQCRQLHLNFPDGSSTPSRLLISR 288
Query: 514 AGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EIS+P + + + E L+S+ DVKLAGL ARDSL
Sbjct: 289 TGYTGEDGFEISIPTDSDANLPRRVAELLISNPDVKLAGLAARDSL 334
>gi|383770756|ref|YP_005449819.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium
sp. S23321]
gi|381358877|dbj|BAL75707.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium
sp. S23321]
Length = 382
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 142/239 (59%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+RTPL+ LHLS GGKMVPFAG+ MPVQY A + HL TRS +FDVSHM Q +
Sbjct: 11 KRTPLHGLHLSLGGKMVPFAGYDMPVQYPA-GVLKEHLQTRSSAGLFDVSHMGQIALRPK 69
Query: 254 TGKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + LE + D+ + PG+ + FTNE GGI DDL+V D LFLV NA+
Sbjct: 70 SGKVEDAARALERLVPQDIVAIAPGRQRYAQFTNENGGILDDLMVA-NFGDHLFLVVNAA 128
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + A +L D + L E+R L+A+QGP + ++L + + S+ F
Sbjct: 129 CKDADEAHLRA------NLSGDCIIGSL--EDRALVALQGPKAESVLAKLC-AEAPSMKF 179
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + P +AG+ C ++R+GYTGEDG EISVP + + LL + DV GLGARDSL
Sbjct: 180 MDAGPHKVAGLDCFVSRSGYTGEDGFEISVPAADAERLAKTLLENPDVMPIGLGARDSL 238
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAITSGCPSPS 74
G FPGA I + +G SR+R G + G P+R G +F +A + +G +TSG PS
Sbjct: 277 AGAFPGAEKILAHFDNGASRRRVGLLAQGRAPVREGALLFATSAGGEPIGKVTSGGFGPS 336
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ A S +G +++ VR +R+ + V MPFVK+ Y
Sbjct: 337 LNAPVAMGYVPTASSALGTQIFAEVRGQRLALTVAAMPFVKNTY 380
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 524
S E+R L+A+QGP + ++L + + S+ FM + P +AG+ C ++R+GYTGEDG EI
Sbjct: 149 SLEDRALVALQGPKAESVLAKLC-AEAPSMKFMDAGPHKVAGLDCFVSRSGYTGEDGFEI 207
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
SVP + + LL + DV GLGARDSL
Sbjct: 208 SVPAADAERLAKTLLENPDVMPIGLGARDSL 238
>gi|237799876|ref|ZP_04588337.1| glycine cleavage system T protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022731|gb|EGI02788.1| glycine cleavage system T protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 374
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 136/232 (58%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+DLHL KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q ++G
Sbjct: 9 TPLHDLHLELSAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLSGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L G ++FTNE GGI DDL+V D L LV NA+ + D+
Sbjct: 68 ARSLETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAGMTFMQFASVK 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP E + LL + +V GLGARDSL
Sbjct: 180 LLGMQCYVSRSGYTGEDGYEISVPAEHAETLARCLLKEPEVAPIGLGARDSL 231
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA +I +Q +GV +KR G P+R G +I +
Sbjct: 251 IQASLLWAISKVRRADGARAGGFPGAELIFAQQANGVDKKRVGLLPQERTPVREGTQIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D +G + SG PSL +AMGY+ Y+ + +W VR K+V ++V+KMPFV
Sbjct: 311 EQDSVIGKVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVRGKKVPMRVSKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAGMTFMQFASVKLLGMQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + LL + +V GLGARDSL
Sbjct: 203 PAEHAETLARCLLKEPEVAPIGLGARDSL 231
>gi|424810516|ref|ZP_18235865.1| glycine cleavage system T protein [Vibrio mimicus SX-4]
gi|342322274|gb|EGU18066.1| glycine cleavage system T protein [Vibrio mimicus SX-4]
Length = 376
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 140/232 (60%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + HLHTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHLHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALETLVPVDIIDLPAGKQRYAFFTNTQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVANMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L + E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARRLTNFEEVEWIGLGARDSL 231
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTKHATLGSEVFAEVRGKMLPMTVEKMPFVPQRYY 373
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVANMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L + E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARRLTNFEEVEWIGLGARDSL 231
>gi|254512233|ref|ZP_05124300.1| glycine cleavage system T protein [Rhodobacteraceae bacterium
KLH11]
gi|254513048|ref|ZP_05125114.1| glycine cleavage system T protein [Rhodobacteraceae bacterium
KLH11]
gi|221533047|gb|EEE36042.1| glycine cleavage system T protein [Rhodobacteraceae bacterium
KLH11]
gi|221535944|gb|EEE38932.1| glycine cleavage system T protein [Rhodobacteraceae bacterium
KLH11]
Length = 364
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 135/237 (56%), Gaps = 18/237 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+DLH++ GGK+V FAG+ MPVQY + I H R K +VFDVSHM Q ++ G+
Sbjct: 5 RRTPLHDLHVALGGKLVDFAGWEMPVQY-PMGIMGEHKQCREKAAVFDVSHMGQVILRGE 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ E LE++C L GK FTN GGI DDLIV+ D F+V NA+ R D
Sbjct: 64 NVGEKLEALCPQAYATLKEGKARYGFFTNADGGIMDDLIVSNA-GDHYFVVVNAALRHQD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEE---RGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ M A HL+ + E R L+AVQGP + ++ L FM
Sbjct: 123 IPHMKA------------HLEGVEVTEIFDRALVAVQGPKAEDVVGELCPA-ARDLKFME 169
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ I G+ C ++R GYTGEDG EIS+P ++ I +A L+ ED + AGLGARDSL
Sbjct: 170 TTLADINGVECRISRLGYTGEDGYEISIPEDKAVEITKAFLAHEDCEPAGLGARDSL 226
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+E GGFPGA +Q ++ G +RK G G P R G EI N +G ITSG
Sbjct: 256 KRRKEEGGFPGAERVQKELAEGAARKLVGIQPAGRAPARQGVEIQCTNGNTIGQITSGSF 315
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ + + G ++ + +R K ++ +PFVK NY
Sbjct: 316 GPTVGGPVAMGYVSAGHGEPGEKVNLIIRGKAQPAEIVALPFVKQNY 362
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+AVQGP + ++ L FM + I G+ C ++R GYTGEDG EIS+P
Sbjct: 140 DRALVAVQGPKAEDVVGELCPA-ARDLKFMETTLADINGVECRISRLGYTGEDGYEISIP 198
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ I +A L+ ED + AGLGARDSL
Sbjct: 199 EDKAVEITKAFLAHEDCEPAGLGARDSL 226
>gi|295687778|ref|YP_003591471.1| glycine cleavage system protein T [Caulobacter segnis ATCC 21756]
gi|295429681|gb|ADG08853.1| glycine cleavage system T protein [Caulobacter segnis ATCC 21756]
Length = 369
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 136/234 (58%), Gaps = 10/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ H++ G +MVPFAG+SMPVQY + HL TR +FDVSHM Q + G+
Sbjct: 6 KKTPLYEAHVAAGARMVPFAGYSMPVQYKD-GVLKEHLWTREHAGLFDVSHMGQARIRGE 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + E + AD L PGK + N GG+ DDL+ + ED LF+V N + + D
Sbjct: 65 NPAKSFEKVVSADYQGLKPGKQRYGVLLNADGGVIDDLMTARPDEDGLFVVVNGACKDND 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
++ + L + + L E+R L+A+QGP ++ +L H + + + FM ++
Sbjct: 125 YAIIA------RELAGEATVTRL--EDRALLALQGPEAAAVLAAHVP-ESAQMVFMDAKA 175
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T G+ ++R+GYTGEDG EISVP + + LL+DE VK GLGARDSL
Sbjct: 176 VTAFGVDAIVSRSGYTGEDGYEISVPADAAERVWNTLLADERVKPIGLGARDSL 229
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L H + + + FM ++ T G+ ++R+GYTGEDG EISV
Sbjct: 142 EDRALLALQGPEAAAVLAAHVP-ESAQMVFMDAKAVTAFGVDAIVSRSGYTGEDGYEISV 200
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL+DE VK GLGARDSL
Sbjct: 201 PADAAERVWNTLLADERVKPIGLGARDSL 229
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGC 70
GK RRE G + GA I ++ ++R R G P R G EI + +G +TSG
Sbjct: 258 GKSRREAGDYLGADRIARELAGDLTRVRVNLKVLEGAPAREGAEIADEAGAVIGKVTSGG 317
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+PSL IA+G+ PAY+ +G +L V VR K +V PFV + Y
Sbjct: 318 FAPSLGYPIAIGFAPPAYAAIGTKLKVIVRGKAAAAEVVASPFVPNRY 365
>gi|163800500|ref|ZP_02194401.1| glycine cleavage system protein T2 [Vibrio sp. AND4]
gi|159175943|gb|EDP60737.1| glycine cleavage system protein T2 [Vibrio sp. AND4]
Length = 372
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 142/233 (60%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 KTPLHALHVEVGAKMVPFAGYDMPVQY-PLGVKKEHLHTRDAAGLFDVSHMGQLRLIGDG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L+ GK + FTN+QGGI DDL+V L D LF+V NA+ ++ D+
Sbjct: 66 AAAFLETLVPVDIVDLEEGKQRYAFFTNDQGGIMDDLMVA-NLGDHLFVVVNAACKEQDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + L+ + ++R L+A+QGP ++ +L +++ + FM R
Sbjct: 125 AHLQA------HLPPSVELEVI--DDRALLALQGPKAAEVLASLAP-EVADMLFMDVRNV 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 176 ELLGVECIVSRSGYTGEDGYEISVPADKAVELALELTGKEEVEWIGLGARDSL 228
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPG II +QI++ V+RKR G T P+R G E+F+A+ ++G +TSG P+
Sbjct: 268 GGFPGVDIILNQIETKDVARKRIGLVGQTKAPVREGVELFDADGNKIGVVTSGTAGPNAG 327
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + VG EL+ VR K + + V KMPFV YY
Sbjct: 328 KPVSMGYVRADLAVVGTELFAEVRGKMLPMTVEKMPFVPQRYY 370
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP ++ +L +++ + FM R + G+ C ++R+GYTGEDG EISV
Sbjct: 141 DDRALLALQGPKAAEVLASLAP-EVADMLFMDVRNVELLGVECIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + L E+V+ GLGARDSL
Sbjct: 200 PADKAVELALELTGKEEVEWIGLGARDSL 228
>gi|257487382|ref|ZP_05641423.1| glycine cleavage system T protein [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|422592444|ref|ZP_16667048.1| glycine cleavage system T protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422679674|ref|ZP_16737947.1| glycine cleavage system T protein [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|330989710|gb|EGH87813.1| glycine cleavage system T protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009021|gb|EGH89077.1| glycine cleavage system T protein [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 374
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 138/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGTDA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTN+ GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGSDQLMLVVNAACKNQDL- 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A R K L ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 127 ----AHLR-KHLAGHCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVK 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLGVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR GGFPGA + +Q ++GV++KR G P+R G EI +
Sbjct: 251 VEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVGLLPEERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ AY+ + ++W VR K+V ++V KMPFV
Sbjct: 311 EQGTVIGTVCSGGFGPSLAGPLAMGYLNNAYTALDTQVWAMVRGKKVPMRVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVKLLGVQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|422648642|ref|ZP_16711762.1| glycine cleavage system T protein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330962176|gb|EGH62436.1| glycine cleavage system T protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 374
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 138/235 (58%), Gaps = 15/235 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q + G
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLGGAGA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTNE GGI DDL+V L LV NA+ ++ D+
Sbjct: 68 AKALETLVPVDIIDLPVGMQRYAMFTNESGGILDDLMVANLGNGQLMLVVNAACKEQDLA 127
Query: 319 LM---VAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ +A Q + L EER L+A+QGP + T+L R +++S+ FM
Sbjct: 128 HLRQHLAGQCTIEPL----------FEERALLALQGPQAVTVLARLAP-EVASMTFMQFA 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+ C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 177 SVTLLGVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV++KR G P+R G +I +
Sbjct: 251 IQASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVNKKRVGLLPQERTPVREGTQIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D +G + SG PSL +AMGY+E Y+ + +W VR K+V ++VTKMPFV
Sbjct: 311 EQDSVIGTVCSGGFGPSLGGPLAMGYLESQYTALDTPVWAMVRGKKVPMRVTKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++S+ FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPQAVTVLARLAP-EVASMTFMQFASVTLLGVQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|440634855|gb|ELR04774.1| glycine cleavage system T protein [Geomyces destructans 20631-21]
Length = 469
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 150/262 (57%), Gaps = 23/262 (8%)
Query: 191 SSPSAEQ---RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
SS AE+ +TPLYD HL +GGKMVPF G++MPVQY ++S+ SH TR+ S+FDVSH
Sbjct: 64 SSAVAEEELAKTPLYDFHLRNGGKMVPFGGYAMPVQYSSLSVLDSHKFTRTGSSLFDVSH 123
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
M+Q TG +LE I +DV L TLS GGI DDLI+TK +D ++V
Sbjct: 124 MVQHHFTGPGAAAFLERITPSDVAGLPVHGSTLSTLLLPTGGIVDDLIITKLWDDRFYVV 183
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-----HT 362
+NA R+ D+ + F+ L +++ E +GLIA+QGP + +L +
Sbjct: 184 TNAGCREKDLAYLKEQLKTFR-LENSSEVEWTVLEGKGLIALQGPKAKEVLGKLVADPAR 242
Query: 363 DLDLSSLYFMTSRPCTIAG------IP-----CTLTRAGYTGEDGVEISVPGEQCTHIVE 411
D LS+LYF SR + +P ++R GYTGEDG EIS+P ++ + E
Sbjct: 243 DGRLSNLYFGQSRYMKLQTAKVGEELPFQSSLLLVSRGGYTGEDGFEISIPAQETERVTE 302
Query: 412 ALLSD---EDVKLAGLGARDSL 430
+L E V+LAGLGARDSL
Sbjct: 303 MILEAGGPEMVQLAGLGARDSL 324
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 12 GKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGA 65
GKRRR GGF GA I Q+K G+ R+R G G P R G + + + VG
Sbjct: 353 GKRRRAEGGFLGAETILPQLKPKAKGGQGIERRRVGLIVQGPPAREG-AVIRVDGKDVGV 411
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+TSGCPSP L+KNIAMGYI+ K G + V VR K +V KMPF+ + YY
Sbjct: 412 VTSGCPSPCLQKNIAMGYIQEGLHKSGTPVEVVVRGKARKAEVAKMPFLATGYY 465
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 19/108 (17%)
Query: 467 EERGLIAVQGPLSSTILQR-----HTDLDLSSLYFMTSRPCTIAGIPC-----------T 510
E +GLIA+QGP + +L + D LS+LYF SR +
Sbjct: 217 EGKGLIALQGPKAKEVLGKLVADPARDGRLSNLYFGQSRYMKLQTAKVGEELPFQSSLLL 276
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
++R GYTGEDG EIS+P ++ + E +L E V+LAGLGARDSL
Sbjct: 277 VSRGGYTGEDGFEISIPAQETERVTEMILEAGGPEMVQLAGLGARDSL 324
>gi|374576545|ref|ZP_09649641.1| glycine cleavage system T protein [Bradyrhizobium sp. WSM471]
gi|374424866|gb|EHR04399.1| glycine cleavage system T protein [Bradyrhizobium sp. WSM471]
Length = 382
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 143/239 (59%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+RTPLYDLH+S GGKMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q +
Sbjct: 11 KRTPLYDLHVSLGGKMVPFAGYDMPVQYPA-GVLKEHLHTRNAAGLFDVSHMGQIALRPK 69
Query: 254 TGKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + LE + D+ + PG+ + FTN +GGI DDL+V D LFLV NA+
Sbjct: 70 SGKVEDAARALERLVPQDILAIAPGRQRYAQFTNGEGGILDDLMVA-NFGDHLFLVVNAA 128
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + A +L D ++ L+ +R LIA+QGP + + L + + ++ F
Sbjct: 129 CKAEDEAHLRA------NLSDDCMIEQLA--DRALIALQGPKAESALAKLC-AEAPAMKF 179
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M S P +AG+ C ++R+GYTGEDG EISVP + ALL + V GLGARDSL
Sbjct: 180 MDSGPHRVAGLDCFVSRSGYTGEDGFEISVPAGDAERLARALLDNPVVMPIGLGARDSL 238
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPS 74
GGFPGA+ I + G SR+R G + G P+R G +F + + +G +TSG PS
Sbjct: 277 AGGFPGAAKILAHFDHGASRRRVGLRTEGRAPVREGALLFADATSGEPIGKVTSGGFGPS 336
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ A S + +L+ VR +R+ V++ MPFVK+ Y
Sbjct: 337 LNAPVAMGYVPTASSAIDTKLFAEVRGQRLAVQIAAMPFVKNTY 380
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L D ++ L+ +R LIA+QGP + + L + + ++ FM S P +AG+ C ++R
Sbjct: 140 NLSDDCMIEQLA--DRALIALQGPKAESALAKLC-AEAPAMKFMDSGPHRVAGLDCFVSR 196
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP + ALL + V GLGARDSL
Sbjct: 197 SGYTGEDGFEISVPAGDAERLARALLDNPVVMPIGLGARDSL 238
>gi|399911054|ref|ZP_10779368.1| glycine cleavage system protein T (aminomethyltransferase)
[Halomonas sp. KM-1]
Length = 370
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYDLHL GGKMVPFAG+ MPVQ+ + + H HTR+ +FDVSHM Q ++ G
Sbjct: 5 KRTPLYDLHLELGGKMVPFAGYEMPVQF-PLGVKKEHEHTRNACGLFDVSHMGQLLLHGP 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E LE++ AD+ L G +LFT + GGI DDL+V D L+LV NA+ + D
Sbjct: 64 SPAEALETLVCADIVGLPQGMQRYALFTAQAGGILDDLMVANP-GDHLYLVVNAACKDQD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ L+ D D H + +R L+A+QGP ++ +++RH ++ R
Sbjct: 123 IALLDMGLD-------DEHR--VEVLDRALLALQGPKAADVMRRHCPQACEQVFMQHGR- 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+P ++R+GYTGEDG EIS+P E+ + LL++++V+ GLGARDSL
Sbjct: 173 FEMMGVPVWISRSGYTGEDGFEISIPAEEAEALARRLLAEDEVEAIGLGARDSL 226
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Query: 12 GKRRRETG----GFPGASIIQSQIKS-GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGA 65
GK RR G GFPGA +I Q+ + RKR G G P+R G E++ + + +G
Sbjct: 255 GKPRRHGGERSAGFPGADVILHQVDAKDHRRKRVGLLGEGRAPVREGAELYGEDGRHIGR 314
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+TSG PS+ + +AMGY++ Y+++G + VR KR+ + V+KMPFV Y+
Sbjct: 315 VTSGGFGPSVGRPVAMGYVDIEYAEIGTTVHAEVRGKRLPMVVSKMPFVAPGYH 368
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 39/183 (21%)
Query: 379 IAGIPCTLTR-AGYTGE-----DGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSG 432
I G+P + R A +T + D + ++ PG+ +V A D+D+ L +G D
Sbjct: 77 IVGLPQGMQRYALFTAQAGGILDDLMVANPGDHLYLVVNAACKDQDIALLDMGLDD---- 132
Query: 433 DITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLS 492
R + L +R L+A+QGP ++ +++RH
Sbjct: 133 ----------------EHRVEVL------------DRALLALQGPKAADVMRRHCPQACE 164
Query: 493 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 552
++ R + G+P ++R+GYTGEDG EIS+P E+ + LL++++V+ GLGAR
Sbjct: 165 QVFMQHGR-FEMMGVPVWISRSGYTGEDGFEISIPAEEAEALARRLLAEDEVEAIGLGAR 223
Query: 553 DSL 555
DSL
Sbjct: 224 DSL 226
>gi|121701837|ref|XP_001269183.1| glycine cleavage system T protein [Aspergillus clavatus NRRL 1]
gi|119397326|gb|EAW07757.1| glycine cleavage system T protein [Aspergillus clavatus NRRL 1]
Length = 489
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 148/256 (57%), Gaps = 22/256 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH++ G KMVPFAG+SMP+QY +S SH TR K S+FDVSHM+Q ++G
Sbjct: 83 KKTQLYDLHVARGAKMVPFAGYSMPLQYSDLSHVESHHWTREKASLFDVSHMVQHHLSGP 142
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
E L + + + +L P TLS E GGI DD ++T+ D+ + V+NA RR
Sbjct: 143 GAMELLMKVSPSSLDQLKPYTSTLSCLLEEGTGGIIDDTVITRLDGDAFYFVTNAGRRAE 202
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ---------RHTDLDL 366
D+ + A + +++ +++ E+R L+A+QGPL++++LQ D DL
Sbjct: 203 DLAFLQAEIEAYRNTHGADSIKWEILEDRALVALQGPLAASVLQPLVSAHGAASPADTDL 262
Query: 367 SSLYFMTSRPC-------TIAGIPCTLTRAGYTGEDGVEISVPGEQ----CTHIVEALLS 415
S+LYF R T P ++R GYTGEDG EIS+P T + + LL+
Sbjct: 263 STLYFGNCRSLHLTLPDGTPTPHPLLISRTGYTGEDGFEISIPTANHPSLPTQVTDLLLA 322
Query: 416 DED-VKLAGLGARDSL 430
+ D V+LAGL ARDSL
Sbjct: 323 NPDHVRLAGLAARDSL 338
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQ-- 61
GK RR+ T F GA+ I Q+ + ++++R GFT G P R G + + D
Sbjct: 367 GKDRRDPASPTAAFNGAAAILPQLAAPAKTLAQRRVGFTVEKGSPAREGAVVVDLADPSH 426
Query: 62 -RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++G +TSG PSPSL NIAMGYI+ K G E+ V VR+K V MP+V+S +Y
Sbjct: 427 PQIGVVTSGLPSPSLGGTNIAMGYIKQGMHKKGTEVGVLVRNKVRKATVVGMPWVESKFY 486
Query: 120 TP 121
P
Sbjct: 487 RP 488
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 21/110 (19%)
Query: 467 EERGLIAVQGPLSSTILQ---------RHTDLDLSSLYFMTSRPC-------TIAGIPCT 510
E+R L+A+QGPL++++LQ D DLS+LYF R T P
Sbjct: 229 EDRALVALQGPLAASVLQPLVSAHGAASPADTDLSTLYFGNCRSLHLTLPDGTPTPHPLL 288
Query: 511 LTRAGYTGEDGVEISVPGEQ----CTHIVEALLSDED-VKLAGLGARDSL 555
++R GYTGEDG EIS+P T + + LL++ D V+LAGL ARDSL
Sbjct: 289 ISRTGYTGEDGFEISIPTANHPSLPTQVTDLLLANPDHVRLAGLAARDSL 338
>gi|388582638|gb|EIM22942.1| glycine cleavage system T protein [Wallemia sebi CBS 633.66]
Length = 395
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 139/237 (58%), Gaps = 4/237 (1%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H++ G +MVPFAG+SMP+QY A+ +H H R + +FDVSHM Q ++
Sbjct: 12 KKTPLYDWHIARGAQMVPFAGWSMPLQYKAMGQVDAHNHVRKQAGLFDVSHMQQIILKQP 71
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++ SI ++L G+ SL E+GGI DD I+TK ++S +LV+NA+R K
Sbjct: 72 KSSNFIHSILPVSYNQL-TNTGSYSLILTEEGGIVDDCILTKWSDESWYLVTNAARSKEV 130
Query: 317 MDLMVAAQDRFK-SLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF--MT 373
+ + Q R++ G+ I + +L ++++ L+A+QGP ++ +L RH++ L LYF ++
Sbjct: 131 ANWLTNQQGRYQDETGESISIDYLESKKQALLALQGPKAAEVLARHSETSLKELYFGNVS 190
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G + R+GYTGEDG EISV I + L GLGARDSL
Sbjct: 191 QNLRLSGGANVHIARSGYTGEDGFEISVEERDAVAIADMLADGNPTIPIGLGARDSL 247
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Query: 21 FPG-ASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
FPG +I S + +S++R G T G R I N N+++VG +TSG PSP+L +N
Sbjct: 289 FPGWGKVIPSLKLANMSKRRVGLTVEKGPAARQNASILNTNEEKVGHVTSGAPSPTLNQN 348
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
IAMGY+ ++ +G ++ V +R ++ +V KMPFV +NYY
Sbjct: 349 IAMGYLPKEFASIGTKVLVDIRGRKRQAEVVKMPFVANNYY 389
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYF--MTSRPCTIAGIPCTLTR 513
G+ I + +L +++ L+A+QGP ++ +L RH++ L LYF ++ G + R
Sbjct: 146 GESISIDYLESKKQALLALQGPKAAEVLARHSETSLKELYFGNVSQNLRLSGGANVHIAR 205
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISV I + L GLGARDSL
Sbjct: 206 SGYTGEDGFEISVEERDAVAIADMLADGNPTIPIGLGARDSL 247
>gi|262403445|ref|ZP_06080003.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. RC586]
gi|262349949|gb|EEY99084.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. RC586]
Length = 376
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALESLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 9 IFPGKRRRET--GGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRVG 64
I P +R+ T GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++G
Sbjct: 259 IQPVRRKGGTREGGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKIG 318
Query: 65 AITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 319 VVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|104783407|ref|YP_609905.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Pseudomonas entomophila L48]
gi|95112394|emb|CAK17121.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Pseudomonas entomophila L48]
Length = 373
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 144/234 (61%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q ++ G
Sbjct: 6 HKTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIILRGN 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LE++ D+ +L G ++FTN QGGI DDL+V +D+LFLV NA+ ++ D
Sbjct: 65 DAARALETLVPVDIVDLPVGMQRYAMFTNPQGGILDDLMVANLGDDTLFLVVNAACKEQD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A R K +G +Q L E R L+A+QGP + +L+R +++ + FM RP
Sbjct: 125 L-----AHLR-KHIGDRCEIQPLF-EARALLALQGPAAVKVLERLAP-EVAGMTFMQFRP 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 177 ITLLGNDCFVSRSGYTGEDGYEISVPAAAAEALARRLLAEPEVQPIGLGARDSL 230
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV+RKR G P+R G +I +
Sbjct: 250 IEASLLWAISKVRRADGTRAGGFPGADTVFAQQQAGVARKRVGLLPQERTPVREGAQIVD 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ VG + SG P+L +AM Y++ ++ + EL+ VR K+V +KV+KMPFV
Sbjct: 310 QAGKVVGEVCSGGFGPTLGAPVAMAYVDSEHAALDTELFALVRGKQVALKVSKMPFVAQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K +G +Q L E R L+A+QGP + +L+R +++ + FM RP T+ G C ++
Sbjct: 130 KHIGDRCEIQPLF-EARALLALQGPAAVKVLERLAP-EVAGMTFMQFRPITLLGNDCFVS 187
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISVP + LL++ +V+ GLGARDSL
Sbjct: 188 RSGYTGEDGYEISVPAAAAEALARRLLAEPEVQPIGLGARDSL 230
>gi|297579611|ref|ZP_06941538.1| glycine cleavage system T protein [Vibrio cholerae RC385]
gi|297535257|gb|EFH74091.1| glycine cleavage system T protein [Vibrio cholerae RC385]
Length = 376
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + HLHTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHLHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALETLVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHATLGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|422587283|ref|ZP_16661954.1| glycine cleavage system T protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330873091|gb|EGH07240.1| glycine cleavage system T protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 374
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 139/233 (59%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q ++G
Sbjct: 8 KTPLHPLHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLSGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V D L LV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELMLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R K L ++ L E+R L+A+QGP + T+L R +++ + FM
Sbjct: 127 -----AHLR-KHLAGHCEIEPLF-EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTRV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 179 TLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q +GV +KR G P+R G +I N
Sbjct: 251 IQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRVGLLPQERTPVREGTQIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D +G + SG PSL +AMGY+ Y+ + +W VR K+V + VTKMPFV
Sbjct: 311 DQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVRGKKVPMLVTKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + T+L R +++ + FM T+ G C ++R+GYTGEDG EISV
Sbjct: 144 EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTRVTLLGAQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|449016203|dbj|BAM79605.1| aminomethyltransferase [Cyanidioschyzon merolae strain 10D]
Length = 474
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 144/256 (56%), Gaps = 18/256 (7%)
Query: 191 SSPSAEQR---TPLYDLHLSHGGKMVPFAGFSMPVQYGAV--SITASHLHTRSKVSVFDV 245
+ PS E++ T LY+ HL +GGKMVPFAG+++PV Y I HL R VFDV
Sbjct: 69 TQPSPEEKLKHTALYETHLKYGGKMVPFAGYALPVMYSGEKGGIKNEHLQVRQSAGVFDV 128
Query: 246 SHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED--- 302
SHM Q V G R +LE + VAD+ L G LSL TNE GGI DD I+T +D
Sbjct: 129 SHMGQVRVYGTDRVRFLERLIVADLQALPAGTAVLSLLTNEHGGIIDDTIITNLGKDNTG 188
Query: 303 --SLFLVSNASRRKVDMDLMVAAQDRFKSL-GKDIHLQFLSAEERGLIAVQGPLSSTILQ 359
+L +V N + DM + A + R + + G D+ L+FL+ +R L+A+QGP + +LQ
Sbjct: 189 AEALNMVINGACVDKDMAHLRAHERRAREVDGMDVRLEFLA--DRSLLALQGPKAMQVLQ 246
Query: 360 RHTD---LDLSSLYFMTSRPCTIAGIPCTL--TRAGYTGEDGVEISVPGEQCTHIVEALL 414
D L+L + FM +R L +R GYTGEDG EISV + + E L+
Sbjct: 247 HIVDRSTLNLEQMAFMNARMVKAPAFSDYLLVSRCGYTGEDGFEISVHNQDAPKLFEMLV 306
Query: 415 SDEDVKLAGLGARDSL 430
S+E V GLGARDSL
Sbjct: 307 SNEAVLPCGLGARDSL 322
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD---LDLSSLYFMTSRPCTIAGIPCTL- 511
G D+ L+FL+ +R L+A+QGP + +LQ D L+L + FM +R L
Sbjct: 220 GMDVRLEFLA--DRSLLALQGPKAMQVLQHIVDRSTLNLEQMAFMNARMVKAPAFSDYLL 277
Query: 512 -TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R GYTGEDG EISV + + E L+S+E V GLGARDSL
Sbjct: 278 VSRCGYTGEDGFEISVHNQDAPKLFEMLVSNEAVLPCGLGARDSL 322
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 21 FPGASIIQSQIK--SGVSRKRTGFTSTGVPIRPGYEIFNANDQR------VGAITSGCPS 72
F GA +I +I S V +KR GF G P G+E + N + +G +TSG S
Sbjct: 366 FLGADVILKEIANPSIVQKKRVGFVLHGGPPARGHETIHENSPKAADNAVIGTVTSGGFS 425
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
P+ I MGYI VG + V++R K V +V KMPFVK+NYY P
Sbjct: 426 PTRNCAIGMGYISKPMDAVGTRISVKIRGKLVPGEVVKMPFVKTNYYKP 474
>gi|294463461|gb|ADE77260.1| unknown [Picea sitchensis]
Length = 254
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 220 MPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGT 279
MP+QY SI S ++ R+ S+FDVSHM + GK +LE + VADV L PG GT
Sbjct: 1 MPIQYKD-SIMDSTVNCRTNGSLFDVSHMCGLSLKGKDCVPFLEKLVVADVAGLSPGSGT 59
Query: 280 LSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFL 339
L++FTNE+GG DD IVTK +D +++V NA R D+ + + FK+ G D+ Q
Sbjct: 60 LTVFTNEKGGAIDDSIVTKVKDDHIYIVVNAGCRDKDLAHIESHMKAFKARGGDVDWQI- 118
Query: 340 SAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 399
++R L+A+QGPL++ LQ+ T DLS LYF + R I G PC +TR GYTGEDG EI
Sbjct: 119 -HDDRSLLALQGPLAAPTLQKLTKEDLSKLYFSSFRMIDINGSPCYITRTGYTGEDGFEI 177
Query: 400 SVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 430
SVP + + +A+L + ++L GLGARDSL
Sbjct: 178 SVPSDHAVDLTKAILDGGEGKLRLTGLGARDSL 210
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ Q ++R L+A+QGPL++ LQ+ T DLS LYF + R I G PC +
Sbjct: 107 FKARGGDVDWQI--HDDRSLLALQGPLAAPTLQKLTKEDLSKLYFSSFRMIDINGSPCYI 164
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 555
TR GYTGEDG EISVP + + +A+L + ++L GLGARDSL
Sbjct: 165 TRTGYTGEDGFEISVPSDHAVDLTKAILDGGEGKLRLTGLGARDSL 210
>gi|83945324|ref|ZP_00957672.1| glycine cleavage system T protein [Oceanicaulis sp. HTCC2633]
gi|83851158|gb|EAP89015.1| glycine cleavage system T protein [Oceanicaulis alexandrii
HTCC2633]
Length = 364
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 136/234 (58%), Gaps = 13/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
RTPLYDLH+ G KMVPFAG+ MPVQY V H HTR +FDVSHM Q + G
Sbjct: 6 NRTPLYDLHVELGAKMVPFAGYEMPVQYDGV--MGEHNHTREAAGLFDVSHMGQARLIGD 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E LE + AD+ L G+ +L N +GGI+DDL+V++ ++ LFLV NA+ ++ D
Sbjct: 64 --ESALEKLITADLAALQSGEQKYTLLLNSEGGIKDDLMVSRPDDEGLFLVVNAACKRSD 121
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
D ++ A K + + + L + R L+A+QGP + ++ D + + FM +
Sbjct: 122 FDYIIEAT---KGVAELVEL-----DGRALLALQGPQAGAVMAELCP-DAAKMVFMQAGW 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ ++R+GYTGEDG EISV E + LLSD VK GLGARDSL
Sbjct: 173 FEVDGLRLMISRSGYTGEDGFEISVANEHASDFARKLLSDARVKPIGLGARDSL 226
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
R L+A+QGP + ++ D + + FM + + G+ ++R+GYTGEDG EISV
Sbjct: 141 RALLALQGPQAGAVMAELCP-DAAKMVFMQAGWFEVDGLRLMISRSGYTGEDGFEISVAN 199
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
E + LLSD VK GLGARDSL
Sbjct: 200 EHASDFARKLLSDARVKPIGLGARDSL 226
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCP 71
K RRE FPGA+ I I ++KR G P R G EI N + VG +TSG
Sbjct: 256 KSRRERADFPGAARILKDIADKPAKKRVGIALKDRAPAREGTEI-AVNGEVVGVVTSGGF 314
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P++ IAMGY+ + G ++ + VR K +V K PF +Y
Sbjct: 315 GPTVGAPIAMGYVRTDLATPGTQVDLMVRGKARPAEVVKTPFAPHRFY 362
>gi|16127585|ref|NP_422149.1| glycine cleavage system T protein [Caulobacter crescentus CB15]
gi|221236401|ref|YP_002518838.1| aminomethyltransferase [Caulobacter crescentus NA1000]
gi|13425059|gb|AAK25317.1| glycine cleavage system T protein [Caulobacter crescentus CB15]
gi|220965574|gb|ACL96930.1| aminomethyltransferase [Caulobacter crescentus NA1000]
Length = 375
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 135/234 (57%), Gaps = 10/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H++ G +MVPFAG+SMPVQY + HL TR +FDVSHM Q + G+
Sbjct: 12 KKTPLYDAHVAAGARMVPFAGYSMPVQY-KDGVLKEHLWTREHAGLFDVSHMGQARIRGE 70
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + E + AD L GK + N GGI DDL+ + ED LF+V N + + D
Sbjct: 71 NPAKSFEKVVSADYQGLKAGKQRYGVLLNADGGIVDDLMTARPDEDGLFVVVNGACKDND 130
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
++ + L + + L E+R L+A+QGP ++ +L H + + + FM ++
Sbjct: 131 YAIIA------RELAGEATVTRL--EDRALLALQGPEAAAVLAAHVP-EAAQMVFMDAKA 181
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ ++R+GYTGEDG EISVP + + LL+DE VK GLGARDSL
Sbjct: 182 LSAFGVDAIISRSGYTGEDGYEISVPADAAERVWNTLLADERVKPIGLGARDSL 235
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ +L H + + + FM ++ + G+ ++R+GYTGEDG EISV
Sbjct: 148 EDRALLALQGPEAAAVLAAHVP-EAAQMVFMDAKALSAFGVDAIISRSGYTGEDGYEISV 206
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL+DE VK GLGARDSL
Sbjct: 207 PADAAERVWNTLLADERVKPIGLGARDSL 235
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGC 70
G+ RRE G + GA+ I ++ +SR R G P R G EI + +G +TSG
Sbjct: 264 GRSRREAGDYLGAARIAKELAGELSRVRVNLKVLEGAPAREGAEIADEAGNVIGKVTSGG 323
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+PSL IA+G+ PAY+ VG +L V VR K +V PFV + Y
Sbjct: 324 FAPSLGFPIAIGFAPPAYAAVGTKLKVIVRGKPAAAEVVASPFVPNRY 371
>gi|421504810|ref|ZP_15951751.1| glycine cleavage system T protein [Pseudomonas mendocina DLHK]
gi|400344768|gb|EJO93137.1| glycine cleavage system T protein [Pseudomonas mendocina DLHK]
Length = 374
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR +FDVSHM Q ++ G++
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLHTREAAGLFDVSHMGQILLRGEN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ +L G ++FT+ QGGI DDL+V +D+L+LV NA+ + D+
Sbjct: 67 AARALETLVPVDIIDLPVGLQRYAMFTDAQGGILDDLMVANLGDDTLYLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ K +G+ ++ L EER L+A+QGP + +L R ++S + FM
Sbjct: 127 AHLK------KHIGEQCQIECLF-EERALLALQGPKAVDVLARLAP-EVSKMTFMQVARV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISV +Q + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGSECIVSRSGYTGEDGFEISVAVDQAETLARSLLAEAEVEAIGLGARDSL 231
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR G FPGA + Q + GV+RKR G VP+R G EI +
Sbjct: 251 IEASLLWAISKVRRADGERAGNFPGAERVFEQQQKGVARKRVGLLPQERVPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +G + SG P+L +AMGY+ +++ V ++W VR KRV +KV K PFV
Sbjct: 311 ADGTVIGQVCSGGFGPTLGAPVAMGYVNASHTAVDSDVWAVVRGKRVAMKVAKTPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K +G+ ++ L EER L+A+QGP + +L R ++S + FM + G C ++
Sbjct: 131 KHIGEQCQIECLF-EERALLALQGPKAVDVLARLAP-EVSKMTFMQVARVRLLGSECIVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISV +Q + +LL++ +V+ GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVAVDQAETLARSLLAEAEVEAIGLGARDSL 231
>gi|392382800|ref|YP_005031997.1| glycine cleavage system T-protein (aminomethyltransferase)
[Azospirillum brasilense Sp245]
gi|356877765|emb|CCC98613.1| glycine cleavage system T-protein (aminomethyltransferase)
[Azospirillum brasilense Sp245]
Length = 370
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 143/232 (61%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL GKMVPFAG+ MPVQY + I H HTR+K +FDVSHM Q +TG+
Sbjct: 11 TPLHSLHLELKGKMVPFAGYDMPVQY-PLGILKEHQHTRAKAGLFDVSHMGQVRLTGEDP 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ D+ L G+ +LF NEQGGI DDL+VT D LFLV NA+R+ D+
Sbjct: 70 AAALESLVPGDIKGLARGRMRYTLFLNEQGGILDDLMVTNA-GDHLFLVVNAARKDHDVA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
M ++R K GK + ++ L+A+QGP ++ +L R + +++ FM+ P T
Sbjct: 129 HM---RERLK--GK---AEVELLDDLALMALQGPEAAAVLGRFIP-EAATMKFMSYLPTT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
GIP +TR+GYTGEDG EIS I ALL++++V+ GLGARDSL
Sbjct: 180 FDGIPVIITRSGYTGEDGYEISCDKSDAETIARALLAEDEVEAIGLGARDSL 231
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPG +II+ Q+ +G R+R G G P R ++ +A+ Q++G +TSG
Sbjct: 261 KRRREEGGFPGYAIIKDQLANGAPRRRVGLQPEGRQPAREHTDVCDADGQKIGEVTSGGF 320
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P+ +AMGY++ A++ VG + + VR K + KV MPFV YY
Sbjct: 321 GPTASAPVAMGYVDRAHAAVGTPVQLMVRGKPLAAKVAAMPFVPQRYY 368
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 475 QGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHI 534
QGP ++ +L R + +++ FM+ P T GIP +TR+GYTGEDG EIS I
Sbjct: 152 QGPEAAAVLGRFIP-EAATMKFMSYLPTTFDGIPVIITRSGYTGEDGYEISCDKSDAETI 210
Query: 535 VEALLSDEDVKLAGLGARDSL 555
ALL++++V+ GLGARDSL
Sbjct: 211 ARALLAEDEVEAIGLGARDSL 231
>gi|327293852|ref|XP_003231622.1| glycine cleavage system T protein [Trichophyton rubrum CBS 118892]
gi|326466250|gb|EGD91703.1| glycine cleavage system T protein [Trichophyton rubrum CBS 118892]
Length = 483
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 153/272 (56%), Gaps = 22/272 (8%)
Query: 181 SGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKV 240
SGL + S ++ S +RT YD H+ H GKMVPFAG++MP+QY +S SH TR K
Sbjct: 63 SGLRYASSSSAAESDIKRTQFYDFHVEHKGKMVPFAGYAMPLQYADLSHVESHKWTREKA 122
Query: 241 SVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKT 299
S+FDVSHM+Q + G + L I A + L TLS +E GGI DD +VT+
Sbjct: 123 SLFDVSHMVQHHIIGPGARDLLMKITPASLDSLKDNHSTLSCLLDESTGGIVDDTVVTRL 182
Query: 300 LEDSLFLVSNASRRKVDMDLMVAAQDRFKS----LGKDIHLQFLSAEERGLIAVQGPLSS 355
+S + V+NA RRK D++ + + F++ +D + + + R L+A+QGP S+
Sbjct: 183 GPESFYFVTNAGRRKEDLEFLTKEIEAFRNSQDPSKRDSVINWTILDNRALVALQGPASA 242
Query: 356 TILQ------RHTDLDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVP 402
+ LQ D DLS+L+F R + + P L +R GYTGEDG EIS+P
Sbjct: 243 SALQPLIKKETSADADLSTLHFGQCRQLHLNFPDGSSTPSRLLISRTGYTGEDGFEISIP 302
Query: 403 GEQCTH----IVEALLSDEDVKLAGLGARDSL 430
+ + + E L+S+ DVKLAGL ARDSL
Sbjct: 303 TDSDANLPRRVAELLISNPDVKLAGLAARDSL 334
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 12 GKRRRETGG----FPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQR- 62
GK RR+ F GAS I Q+ S ++R+R GFT G P R G I + D +
Sbjct: 363 GKDRRDPSSPLSKFNGASTILPQLASPAKTLTRRRVGFTVEGGAPAREGAVIVDLADGKT 422
Query: 63 -VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSG PSP+L NIAMGYI+ K G E+ + VR K VT MP+++S +Y
Sbjct: 423 EVGVVTSGLPSPTLGGTNIAMGYIKQGLHKKGTEVGILVRKKLRKATVTPMPWIESKFY 481
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 17/106 (16%)
Query: 467 EERGLIAVQGPLSSTILQ------RHTDLDLSSLYFMTSRPCTI-----AGIPCTL--TR 513
+ R L+A+QGP S++ LQ D DLS+L+F R + + P L +R
Sbjct: 229 DNRALVALQGPASASALQPLIKKETSADADLSTLHFGQCRQLHLNFPDGSSTPSRLLISR 288
Query: 514 AGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EIS+P + + + E L+S+ DVKLAGL ARDSL
Sbjct: 289 TGYTGEDGFEISIPTDSDANLPRRVAELLISNPDVKLAGLAARDSL 334
>gi|402086976|gb|EJT81874.1| hypothetical protein GGTG_01848 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 478
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 155/253 (61%), Gaps = 23/253 (9%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLY LH++HG KMVPF GF MPVQY + S++ASH TR + S+FDVSHM+Q +G+
Sbjct: 78 KTPLYHLHVTHGAKMVPFGGFHMPVQYSSKSVSASHHFTRERASLFDVSHMVQRRFSGRG 137
Query: 258 REEWLESICVADVHELDPGKGTL-SLFTNEQGGIQDDLIVTKTLEDSLF-LVSNASRRKV 315
+LE + + + +L TL +L GGI DD IVT+ L+D LF +V+NA+ R
Sbjct: 138 AAAFLELVTPSGIADLAVHHSTLTTLLHRGTGGIVDDCIVTR-LDDHLFYVVTNAACRDK 196
Query: 316 D-----MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSST----ILQRHTDLDL 366
D +L A+ + + + L+ RGL+A+QGPLS+ IL ++D+
Sbjct: 197 DDAYFAKELAAWAKSHSGAAATAVEHEILA--YRGLVALQGPLSAEILTGILAEPAEVDV 254
Query: 367 SSLYFMTSR--PCTIAGI----PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DE 417
SL+F TSR + G+ P ++R GYTGEDG EIS+P ++ T +VEALL+ +
Sbjct: 255 PSLHFGTSRFGQVRLLGMEVSSPLLISRGGYTGEDGFEISIPADETTPVVEALLAWAGPD 314
Query: 418 DVKLAGLGARDSL 430
+ LAGLGARDSL
Sbjct: 315 RLALAGLGARDSL 327
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
Query: 9 IFPGKRRRETGGFPGASII------QSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAND-- 60
+ P RRR GF GA ++ +S+ +GV R+R G G P R G EI D
Sbjct: 354 VIPKARRRADAGFHGAEVVVPSLTLKSKGGAGVERRRVGLVVEGAPAREGAEIVGGEDGG 413
Query: 61 QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+++G +TSGCPSP+L KNIAMGYI+ + K G E+ V VR K VTKMPFV + Y+
Sbjct: 414 EKLGVVTSGCPSPTLGKNIAMGYIKDGFHKAGTEVAVLVRGKPRKAVVTKMPFVPTKYW 472
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 13/100 (13%)
Query: 469 RGLIAVQGPLSSTIL----QRHTDLDLSSLYFMTSR--PCTIAGI----PCTLTRAGYTG 518
RGL+A+QGPLS+ IL ++D+ SL+F TSR + G+ P ++R GYTG
Sbjct: 228 RGLVALQGPLSAEILTGILAEPAEVDVPSLHFGTSRFGQVRLLGMEVSSPLLISRGGYTG 287
Query: 519 EDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
EDG EIS+P ++ T +VEALL+ + + LAGLGARDSL
Sbjct: 288 EDGFEISIPADETTPVVEALLAWAGPDRLALAGLGARDSL 327
>gi|118378042|ref|XP_001022197.1| glycine cleavage system T protein [Tetrahymena thermophila]
gi|89303964|gb|EAS01952.1| glycine cleavage system T protein [Tetrahymena thermophila SB210]
Length = 1724
Score = 172 bits (435), Expect = 5e-40, Method: Composition-based stats.
Identities = 104/258 (40%), Positives = 148/258 (57%), Gaps = 10/258 (3%)
Query: 175 KFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLSH-GGKMVPFAGFSMPVQYGAVSITASH 233
+ LS + F FS P A +T L + H S KMV FAG+ MPVQY + H
Sbjct: 3 RVLSIINKSKFAFS-SDQPLA--KTALCEFHKSQLNAKMVEFAGYEMPVQYKE-GVLKEH 58
Query: 234 LHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDD 293
LHTR S+FDVSHM Q + GK +++E + V D+ +G LSL N+ GI DD
Sbjct: 59 LHTRESASLFDVSHMGQVKIRGKDSVDFIEKLIVGDIRGKPVAEGFLSLILNKNAGIIDD 118
Query: 294 LIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPL 353
IVTK +D + +V N + + +D++ M ++ F + D+ +++L + R LIA+QGP
Sbjct: 119 TIVTK-FDDHIHMVVNGANKYIDLEHMKKLKEEFFA-NSDVSIEYL--DTRQLIAIQGPK 174
Query: 354 SSTILQRHTDLDLSSLYFMTSRPCTI-AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEA 412
++ +LQ TD DLS + FM T+ G+ R GYTGEDG EISV ++ + E
Sbjct: 175 AAQVLQNLTDTDLSKIKFMHHVDLTLKGGMKVNACRCGYTGEDGFEISVSEQEAVQLAEL 234
Query: 413 LLSDEDVKLAGLGARDSL 430
LL++ +K AGLGARDSL
Sbjct: 235 LLANPLLKPAGLGARDSL 252
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/111 (43%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI- 504
KL + F + D+ +++L + R LIA+QGP ++ +LQ TD DLS + FM T+
Sbjct: 146 KLKEEFFAN--SDVSIEYL--DTRQLIAIQGPKAAQVLQNLTDTDLSKIKFMHHVDLTLK 201
Query: 505 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G+ R GYTGEDG EISV ++ + E LL++ +K AGLGARDSL
Sbjct: 202 GGMKVNACRCGYTGEDGFEISVSEQEAVQLAELLLANPLLKPAGLGARDSL 252
Score = 62.0 bits (149), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 10 FPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAIT 67
FP K++ F G+ ++ Q K GVS+KR GF + G+ IR G ++ + +VG ++
Sbjct: 288 FPEKQK-----FLGSEVLAKQRKEGVSQKRVGFAVKNNGI-IRQGCDVLDEQGNKVGHVS 341
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVEL 95
SG SP LKK + M ++ PA S VG +L
Sbjct: 342 SGTYSPILKKGVGMIFVPPALSSVGQQL 369
>gi|422297233|ref|ZP_16384872.1| glycine cleavage system T protein [Pseudomonas avellanae BPIC 631]
gi|407991398|gb|EKG33269.1| glycine cleavage system T protein [Pseudomonas avellanae BPIC 631]
Length = 374
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 139/233 (59%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q ++G
Sbjct: 8 KTPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLSGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V D L LV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELMLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R K L ++ L E+R L+A+QGP + T+L R +++ + FM
Sbjct: 127 -----AHLR-KHLAGHCEIEPLF-EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTRV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 179 TLLGAQCYVSRSGYTGEDGYEISVPAEQSEALARRLLEEPEVAPIGLGARDSL 231
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL + RR GGFPGA + +Q +GV +KR G P+R G +I N
Sbjct: 251 IQASLLWAISRVRRADGARAGGFPGAESVFAQQGNGVDKKRVGLLPQERTPVREGTQIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D +G + SG PSL +AMGY+ Y+ + +W VR K+V + VTKMPFV
Sbjct: 311 DQDFVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVRGKKVPMLVTKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + T+L R +++ + FM T+ G C ++R+GYTGEDG EISV
Sbjct: 144 EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTRVTLLGAQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQSEALARRLLEEPEVAPIGLGARDSL 231
>gi|16182554|gb|AAL13520.1| GH04419p [Drosophila melanogaster]
Length = 329
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 121/186 (65%), Gaps = 3/186 (1%)
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
MLQ+ + GK LES+C AD+ G G+L++FTNE GGI DDLIV K E L++V
Sbjct: 1 MLQSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVV 60
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLD 365
SNA+ ++ DM +M A D FKS GKD+ ++FL+ ++ L+AVQGP + L +
Sbjct: 61 SNAAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKAS 120
Query: 366 LSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
L LYFM+S T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGL
Sbjct: 121 LDQLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGL 180
Query: 425 GARDSL 430
GARDSL
Sbjct: 181 GARDSL 186
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNANDQRVGAITSG 69
KRRR T FPGA +I Q+K GVSR+R G G P R G IF + Q+VG +TSG
Sbjct: 216 KRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVAIF-SQGQQVGQVTSG 274
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
CPSPS +NIAMGY+ G ++ +VRDK + +VTKMPFVK+NYY PK
Sbjct: 275 CPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVKANYYNRPK 328
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query: 443 GSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSR 500
G +K + D FKS GKD+ ++FL+P ++ L+AVQGP + L + L LYFM+S
Sbjct: 71 GIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLDQLYFMSSF 130
Query: 501 PCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGARDSL
Sbjct: 131 VTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGARDSL 186
>gi|90414868|ref|ZP_01222834.1| putative glycine cleavage system T protein [Photobacterium
profundum 3TCK]
gi|90324046|gb|EAS40637.1| putative glycine cleavage system T protein [Photobacterium
profundum 3TCK]
Length = 372
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 143/232 (61%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + HLH R +FDVSHM Q + G +
Sbjct: 8 TPLHALHVEMGAKMVPFAGYDMPVQY-ALGVRKEHLHCRDAAGLFDVSHMGQLRLHGANA 66
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ +E++ D+ +L GK + FTNE+GGI DDL+VT D LF+V NA+ + D+
Sbjct: 67 AKAIEALVPVDIIDLPSGKQRYAFFTNEEGGISDDLMVT-NFGDHLFVVVNAACKDQDIA 125
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A +L +D+ ++ + ++R L+A+QGP ++ +L R + +S + FM +
Sbjct: 126 HIHA------NLPEDVTMEVI--DDRALLALQGPKAAEVLAR-LNPAVSDMVFMDAMKLE 176
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + LL+ +V+ GLGARDSL
Sbjct: 177 LCGVECYVSRSGYTGEDGYEISVPADTADAFARELLAYAEVEWIGLGARDSL 228
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA +I QIK+ V+RKR G + P+R G ++F+ ND VG +TSG PS
Sbjct: 267 AGGFPGADLILEQIKTKDVARKRVGLLGHSKAPVREGSKLFDVNDNEVGIVTSGTFGPSK 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AM Y++ + +G EL+ VR K++ + V KMPFV YY
Sbjct: 327 GMPVAMAYVQTGLAVIGTELFAEVRGKKLPMTVEKMPFVPQRYY 370
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L +D+ ++ + ++R L+A+QGP ++ +L R + +S + FM + + G+ C ++R
Sbjct: 130 NLPEDVTMEVI--DDRALLALQGPKAAEVLAR-LNPAVSDMVFMDAMKLELCGVECYVSR 186
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP + LL+ +V+ GLGARDSL
Sbjct: 187 SGYTGEDGYEISVPADTADAFARELLAYAEVEWIGLGARDSL 228
>gi|171058244|ref|YP_001790593.1| glycine cleavage system T protein [Leptothrix cholodnii SP-6]
gi|170775689|gb|ACB33828.1| glycine cleavage system T protein [Leptothrix cholodnii SP-6]
Length = 374
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 142/240 (59%), Gaps = 11/240 (4%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ +A +TPL++LHL G +MVPFAG++MPV Y I A H RS ++FDVSHM Q
Sbjct: 2 SADTALLQTPLHELHLELGARMVPFAGYAMPVNYPG-GILAEHRQCRSGAALFDVSHMGQ 60
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ G + LES+ DV +L GK + FTNE GG+ DDL++T+ ED LFLV NA
Sbjct: 61 VRLIGSDADRALESLVPVDVVDLAIGKQRYAFFTNEAGGLLDDLMITRR-EDDLFLVVNA 119
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ D+ ++ +G Q + + L+A+QGP + T L R + ++ L
Sbjct: 120 GCKAADIRHLI------THIGH--RCQIVPMPDHALLALQGPQAVTALAR-LNAGVAGLT 170
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM+ +AG C +TR+GYTGEDG EISVP + +LL+ +V+ AGLGARD+L
Sbjct: 171 FMSGGHFALAGADCFVTRSGYTGEDGFEISVPATHAVALARSLLAQPEVQPAGLGARDTL 230
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
Q + + L+A+QGP + T L R + ++ L FM+ +AG C +TR+GYTGEDG
Sbjct: 138 QIVPMPDHALLALQGPQAVTALAR-LNAGVAGLTFMSGGHFALAGADCFVTRSGYTGEDG 196
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP + +LL+ +V+ AGLGARD+L
Sbjct: 197 FEISVPATHAVALARSLLAQPEVQPAGLGARDTL 230
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQRVGAITS 68
PG R GG+PGA +I+ Q+ G S KR G P+R G + N ++G +TS
Sbjct: 264 PGGAR--AGGYPGAKVIEGQLAQGPSHKRVGLVGLERAPVREGATLVDNHGSHKLGTVTS 321
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G PS+ + IAM Y+ ++ G ++ VR KR+ +KV +PF Y+
Sbjct: 322 GTTGPSVNQPIAMAYVATNHAGPGNLMYAEVRGKRLPMKVVPLPFAPHRYF 372
>gi|349686614|ref|ZP_08897756.1| glycine cleavage system T protein [Gluconacetobacter oboediens
174Bp2]
Length = 377
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 135/238 (56%), Gaps = 16/238 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLYDLHL G +MVPFAG+ MPVQY A + A HLHTR+K +FDVSHM Q + +
Sbjct: 7 RTPLYDLHLELGARMVPFAGYDMPVQYSA-GVMAEHLHTRAKAGLFDVSHMGQVRLCARS 65
Query: 258 -----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
LE++ AD+ L PG+ +LFT GGI DDL+V + D L LV NA+
Sbjct: 66 GLLADAARALEALVPADIVSLKPGRQRYALFTTADGGISDDLMVAN-MGDWLLLVVNAAC 124
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D A R +LG + L+ +R LIAVQGP + L + + + FM
Sbjct: 125 KDADF-----AHVR-DALGATCDVDMLA--DRALIAVQGPAAEAALA-GLNPRAAGMRFM 175
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ C ++R+GYTGEDG EI + + ALL+ DV AGLGARDSL
Sbjct: 176 DVAELELAGVACIVSRSGYTGEDGFEIGMAAGGAVTVARALLAHPDVAPAGLGARDSL 233
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAIT 67
PG R GG+PGA+I+ Q+ G +R+R G + G P+R G ++F A Q G +T
Sbjct: 267 PGGAR--AGGYPGAAIVADQLADGTTRRRVGLRAHGRAPVRGGADLFADEAGTQPAGRVT 324
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SG PS+ +AMGY+ ++ G L+ VR + + V VT MPFV +
Sbjct: 325 SGAFGPSVGGPVAMGYVAADHATTGTPLFASVRGRLLPVTVTAMPFVAPTF 375
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+LG + L+ +R LIAVQGP + L + + + FM +AG+ C ++R
Sbjct: 135 ALGATCDVDMLA--DRALIAVQGPAAEAALA-GLNPRAAGMRFMDVAELELAGVACIVSR 191
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EI + + ALL+ DV AGLGARDSL
Sbjct: 192 SGYTGEDGFEIGMAAGGAVTVARALLAHPDVAPAGLGARDSL 233
>gi|422650091|ref|ZP_16712898.1| glycine cleavage system T protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330963181|gb|EGH63441.1| glycine cleavage system T protein [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 374
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 138/234 (58%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q ++G
Sbjct: 8 KTPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLSGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V D L LV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELMLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G +I F E+R L+A+QGP + T+L R +++ + FM
Sbjct: 127 -----AHLREHLAGHCEIEPLF---EQRALLALQGPAAVTVLARMAP-EVAHMTFMQFTR 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 178 VTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q +GV +KR G P+R G +I N
Sbjct: 251 IQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRVGLLPQERTPVREGTQIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D +G + SG PSL +AMGY+ Y+ + +W RVR K+V + VTKMPFV
Sbjct: 311 DQDVAIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWARVRGKKVPMLVTKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + T+L R +++ + FM T+ G C ++R+GYTGEDG EISV
Sbjct: 144 EQRALLALQGPAAVTVLARMAP-EVAHMTFMQFTRVTLLGAQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|254577075|ref|XP_002494524.1| ZYRO0A03542p [Zygosaccharomyces rouxii]
gi|238937413|emb|CAR25591.1| ZYRO0A03542p [Zygosaccharomyces rouxii]
Length = 413
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 137/244 (56%), Gaps = 9/244 (3%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
S+ + ++T L+DLH+ GG MVPFAG+SMPV Y S SH TR+ +FDVSHML
Sbjct: 30 NSTQAGLKKTALHDLHVELGGNMVPFAGYSMPVAYKGQSHIESHRWTRTHAGLFDVSHML 89
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
Q+ + GK +L + D +L PG GTLS+ N GGI DD ++TK ++V+N
Sbjct: 90 QSTLQGKDAVNFLHKVTPTDFQQLHPGVGTLSVLLNPNGGIVDDTLITKQSAHDFYMVTN 149
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLS 367
A+ + D +V D KS+ ++ +R L+A+QGP + +LQ D L+
Sbjct: 150 AACAERDSQFLV---DELKSVAD---AKWTPITDRSLLALQGPDAHRVLQHVLAWDQSLA 203
Query: 368 SLYFMTSRPCTI-AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
LYF R + G + R+GYTGEDG E+S+P E ++LL +E K GL A
Sbjct: 204 DLYFGQRRSYKLFNGAYIDVARSGYTGEDGFEVSIPNEDALQFAQSLLDNEMTKPIGLAA 263
Query: 427 RDSL 430
RDSL
Sbjct: 264 RDSL 267
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 468 ERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTI-AGIPCTLTRAGYTGEDGVEI 524
+R L+A+QGP + +LQ D L+ LYF R + G + R+GYTGEDG E+
Sbjct: 177 DRSLLALQGPDAHRVLQHVLAWDQSLADLYFGQRRSYKLFNGAYIDVARSGYTGEDGFEV 236
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S+P E ++LL +E K GL ARDSL
Sbjct: 237 SIPNEDALQFAQSLLDNEMTKPIGLAARDSL 267
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 14 RRRETGG--FPGASIIQSQIKSGVSRK-RTGF--TSTGVPIRPGYEIFNANDQ-RVGAIT 67
RR T G F G I QI + + R G+ + G R G +IF + + VG +T
Sbjct: 299 RRNITEGVKFNGYDKIIDQINNKTHKSLRVGYRYQTKGPAARTGSKIFLPDGKTEVGHVT 358
Query: 68 SGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SG SPSL NI GY+ ++K G L V+VR+K + +++ KMPFV SNYY
Sbjct: 359 SGSASPSLDNINIGQGYVLKPHNKRGTNLLVQVRNKLLPIELVKMPFVPSNYY 411
>gi|213968380|ref|ZP_03396524.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
T1]
gi|213927018|gb|EEB60569.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
T1]
Length = 409
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 139/234 (59%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q ++G
Sbjct: 43 KTPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLSGAD 101
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V + L LV NA+ + D+
Sbjct: 102 AAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELMLVVNAACKDQDL 161
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ +I F E+R L+A+QGP + T+L R +++ + FM
Sbjct: 162 -----AHLRKHLAGRCEIEPLF---EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTR 212
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 213 VTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 266
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q +GV +KR G P+R G +I N
Sbjct: 286 IQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAGLLPQERTPVREGTQIVN 345
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D +G + SG PSL +AMGY+ Y+ + +W VR K+V + VTKMPFV
Sbjct: 346 DQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVRGKKVPMLVTKMPFVAQR 405
Query: 118 YY 119
Y+
Sbjct: 406 YF 407
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + T+L R +++ + FM T+ G C ++R+GYTGEDG EISV
Sbjct: 179 EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTRVTLLGAQCYVSRSGYTGEDGYEISV 237
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 238 PAEQAEALARRLLEEPEVAPIGLGARDSL 266
>gi|326474239|gb|EGD98248.1| glycine cleavage system T protein [Trichophyton tonsurans CBS
112818]
gi|326479219|gb|EGE03229.1| glycine cleavage system T protein [Trichophyton equinum CBS 127.97]
Length = 483
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 144/256 (56%), Gaps = 22/256 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT YD H+ H GKMVPFAG++MP+QY +S SH TR K S+FDVSHM+Q + G
Sbjct: 79 KRTQFYDFHVEHKGKMVPFAGYAMPLQYADLSHVESHKWTREKASLFDVSHMVQHHIIGP 138
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ L I A + L TLS +E GGI DD +VT+ +S + V+NA RRK
Sbjct: 139 GARDLLMKITPASLDSLKDNHSTLSCLLDESTGGIVDDTVVTRLGPESFYFVTNAGRRKE 198
Query: 316 DMDLMVAAQDRFKS----LGKDIHLQFLSAEERGLIAVQGPLSSTILQ------RHTDLD 365
D++ + + F++ +D + + + R L+A+QGP S+ LQ D D
Sbjct: 199 DLEFLTKEIEAFRNSQDPSKRDSVINWTILDNRALVALQGPASANALQPLIKKETSADAD 258
Query: 366 LSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVPGEQCTH----IVEALL 414
LS+L+F R + + P L +R GYTGEDG EIS+P + + + E L+
Sbjct: 259 LSTLHFGQCRQLHLNFPDGSSTPSRLLISRTGYTGEDGFEISIPTDSDANLPRRVAELLI 318
Query: 415 SDEDVKLAGLGARDSL 430
S+ DVKLAGL ARDSL
Sbjct: 319 SNPDVKLAGLAARDSL 334
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 12 GKRRRETGG----FPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQR- 62
GK RR+ F GAS I Q+ S ++R+R GFT G P R G I + D +
Sbjct: 363 GKDRRDPSSPLSKFNGASTILPQLASPAKTLTRRRVGFTVEGGAPAREGAVIVDLADGKT 422
Query: 63 -VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSG PSP+L NIAMGYI+ K G E+ + VR K VT MP+++S +Y
Sbjct: 423 EVGVVTSGLPSPTLGGTNIAMGYIKQGLHKKGTEVGILVRKKLRKATVTPMPWIESKFY 481
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 17/106 (16%)
Query: 467 EERGLIAVQGPLSSTILQ------RHTDLDLSSLYFMTSRPCTI-----AGIPCTL--TR 513
+ R L+A+QGP S+ LQ D DLS+L+F R + + P L +R
Sbjct: 229 DNRALVALQGPASANALQPLIKKETSADADLSTLHFGQCRQLHLNFPDGSSTPSRLLISR 288
Query: 514 AGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EIS+P + + + E L+S+ DVKLAGL ARDSL
Sbjct: 289 TGYTGEDGFEISIPTDSDANLPRRVAELLISNPDVKLAGLAARDSL 334
>gi|28868486|ref|NP_791105.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851724|gb|AAO54800.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 409
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 139/234 (59%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q ++G
Sbjct: 43 KTPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLSGAD 101
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V + L LV NA+ + D+
Sbjct: 102 AAKTLETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELMLVVNAACKDQDL 161
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ +I F E+R L+A+QGP + T+L R +++ + FM
Sbjct: 162 -----AHLRKHLAGRCEIEPLF---EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTR 212
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 213 VTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 266
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q +GV +KR G P+R G +I N
Sbjct: 286 IQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAGLLPQERTPVREGTQIVN 345
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D +G + SG PSL +AMGY+ Y+ + +W VR K+V + VTKMPFV
Sbjct: 346 DQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVRGKKVPMLVTKMPFVAQR 405
Query: 118 YY 119
Y+
Sbjct: 406 YF 407
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + T+L R +++ + FM T+ G C ++R+GYTGEDG EISV
Sbjct: 179 EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTRVTLLGAQCYVSRSGYTGEDGYEISV 237
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 238 PAEQAEALARRLLEEPEVAPIGLGARDSL 266
>gi|398862832|ref|ZP_10618418.1| glycine cleavage system T protein [Pseudomonas sp. GM78]
gi|398249819|gb|EJN35193.1| glycine cleavage system T protein [Pseudomonas sp. GM78]
Length = 374
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 146/239 (61%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIVDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G+ ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGEQCSIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M P + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFAPVKLLGVDCFVSRSGYTGEDGFEISVPATSAEALARALLAEPEVAAIGLGARDSL 231
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV+RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAESVFAQQQAGVTRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGYI+ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGSVCSGGFGPTLGGPLAMGYIDSAYIAIDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K +G+ ++ L EER L+A+QGP + T+L R +++ + FM P + G+ C ++
Sbjct: 131 KHIGEQCSIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFAPVKLLGVDCFVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVPATSAEALARALLAEPEVAAIGLGARDSL 231
>gi|91976211|ref|YP_568870.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris BisB5]
gi|91682667|gb|ABE38969.1| glycine cleavage system T protein [Rhodopseudomonas palustris
BisB5]
Length = 382
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/242 (43%), Positives = 138/242 (57%), Gaps = 16/242 (6%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A +RTPL+ LHL+ GGKMVPFAG+ MPVQ+ A + HLH R+ +FDVSHM Q +
Sbjct: 8 AALKRTPLHALHLARGGKMVPFAGYDMPVQF-APGVLKEHLHNRAHAGLFDVSHMGQIEL 66
Query: 254 TGKHRE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
K + LE + D+ L PG+ + FTNE GGI DDL+VT L D LFLV
Sbjct: 67 RAKSGKLDDAARALERLVPQDIAALPPGRQRYAQFTNESGGILDDLMVT-NLGDRLFLVV 125
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D + A L + + L ER L+A+QGP + L H D+
Sbjct: 126 NAACKAEDEAHLRA------HLSETCEITALP--ERALLALQGPKAEAALG-HFCADIGK 176
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
L FM T+ G+ C ++R+GYTGEDG EISVP + +ALL DV GLGARD
Sbjct: 177 LRFMDVAELTLMGLRCYVSRSGYTGEDGFEISVPADGAEAFAQALLDHPDVLPIGLGARD 236
Query: 429 SL 430
SL
Sbjct: 237 SL 238
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN 57
+ SRL K RR GGF GA+ I +Q+ G +R R GF G P+R G ++
Sbjct: 258 VESRLSWSIQKSRRSGGARPGGFLGANAILAQLDQGTARIRVGFRPEGRAPVREGATLYA 317
Query: 58 AND--QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
D + +G++TSG PSL +AMGY+ A + +G ++ VR +R+ ++V MPFV
Sbjct: 318 GADAAEPIGSVTSGGFGPSLNAPVAMGYLPTAQAAIGTVVFAEVRGQRLPLRVAAMPFVP 377
Query: 116 SNY 118
+ Y
Sbjct: 378 NTY 380
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGP + L H D+ L FM T+ G+ C ++R+GYTGEDG EISVP
Sbjct: 152 ERALLALQGPKAEAALG-HFCADIGKLRFMDVAELTLMGLRCYVSRSGYTGEDGFEISVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ +ALL DV GLGARDSL
Sbjct: 211 ADGAEAFAQALLDHPDVLPIGLGARDSL 238
>gi|241956604|ref|XP_002421022.1| aminomethyltransferase, mitochondrial precursor, putative; glycine
decarboxylase complex subunit, putative [Candida
dubliniensis CD36]
gi|223644365|emb|CAX41178.1| aminomethyltransferase, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 394
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 144/250 (57%), Gaps = 17/250 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS S +TPLY+ H+ GGKMVP+AGF MPV Y S SH RSKV +FDVSHMLQ
Sbjct: 11 SSTSNLLKTPLYEAHIELGGKMVPYAGFEMPVLYKGQSHIESHNWVRSKVGLFDVSHMLQ 70
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK ++ L+ I D+++L +LS+ N GG+ DD I+TK E+ ++V+NA
Sbjct: 71 HNINGKDAQKLLQKITPIDLNKLPVNTSSLSVLLNNNGGVIDDCIITKHGEEDYYMVTNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + +F S+ H F E L+A+QGP S ILQ+ T+ DLS +Y
Sbjct: 131 GCRDKDIKFIKEEASQFNSVN---HNTF----EGTLLAIQGPKSQEILQQFTNEDLSKIY 183
Query: 371 FMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVP------GEQCTHIVEALLSD--EDVK 420
F ++ ++ I T L R+GYTGEDG E+S+P +Q L+++ + VK
Sbjct: 184 FGQTKFLKLSPIGATVHLARSGYTGEDGFELSIPSTTPEESKQALDFFYTLINEYPDVVK 243
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 244 PIGLAARDSL 253
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK--SGVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGA 65
+ P RR E F GAS I SQIK S + +R G TS G R G +IFN + +G
Sbjct: 280 LIPKTRRDENNDFNGASKILSQIKDKSSFTHRRIGLTSKGPSPRDGNKIFNEDGTVEIGY 339
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+TSG PSP+L N+A YI+ + K+G ++ + +R+K D +TK+PFV SN Y P
Sbjct: 340 VTSGSPSPTLSGNVAQAYIDKKH-KIGNKVKIEIRNKLRDAVITKLPFVPSNLYKP 394
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 48/218 (22%)
Query: 349 VQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTH 408
+ G + +LQ+ T +DL+ L P + + L G +D + I+ GE+ +
Sbjct: 73 INGKDAQKLLQKITPIDLNKL------PVNTSSLSVLLNNNGGVIDDCI-ITKHGEEDYY 125
Query: 409 IV-EALLSDEDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPE 467
+V A D+D+K +K +F S+ H F
Sbjct: 126 MVTNAGCRDKDIKF-----------------------IKEEASQFNSVN---HNTF---- 155
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEIS 525
E L+A+QGP S ILQ+ T+ DLS +YF ++ ++ I T L R+GYTGEDG E+S
Sbjct: 156 EGTLLAIQGPKSQEILQQFTNEDLSKIYFGQTKFLKLSPIGATVHLARSGYTGEDGFELS 215
Query: 526 VP------GEQCTHIVEALLSD--EDVKLAGLGARDSL 555
+P +Q L+++ + VK GL ARDSL
Sbjct: 216 IPSTTPEESKQALDFFYTLINEYPDVVKPIGLAARDSL 253
>gi|260429530|ref|ZP_05783507.1| glycine cleavage system T protein [Citreicella sp. SE45]
gi|260420153|gb|EEX13406.1| glycine cleavage system T protein [Citreicella sp. SE45]
Length = 375
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 139/237 (58%), Gaps = 13/237 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+DLHLS G KMVPFAG+ MPVQY + + HLH R+ FDVSHM Q ++ G
Sbjct: 5 KRTPLHDLHLSLGAKMVPFAGYEMPVQY-KLGVMKEHLHCRAAAGFFDVSHMGQVILRGD 63
Query: 257 HREE---WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
E LE++ V L G+ LFTNE GGI+DDL++ D LFLV NA+ +
Sbjct: 64 DPEGVALALETLVPVAVAGLGEGRQRYGLFTNEDGGIEDDLMIANR-GDHLFLVVNAACK 122
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D+ + A + + + ++ E+R L A+QGP + +L + ++ + FM
Sbjct: 123 EADVARLRAGLEP-----AGVTVDYI--EDRALFALQGPAAEQVLA-ALNPAVAGMRFMD 174
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG C ++R+GYTGEDG EISVP + EALL+ E V+ GLGARDSL
Sbjct: 175 VATVELAGAECLVSRSGYTGEDGYEISVPEASAVTLAEALLAHEAVEPIGLGARDSL 231
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L A+QGP + +L + ++ + FM +AG C ++R+GYTGEDG EISV
Sbjct: 144 EDRALFALQGPAAEQVLA-ALNPAVAGMRFMDVATVELAGAECLVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EALL+ E V+ GLGARDSL
Sbjct: 203 PEASAVTLAEALLAHEAVEPIGLGARDSL 231
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNA--NDQRVGAITSGCPSPS 74
GGFPGA I ++I +G R G G P+R G E+F VG ITSG P+
Sbjct: 270 AGGFPGAEKILAEIATGAPSVRVGLKPAGRAPMREGVELFETETGGDAVGRITSGGFGPT 329
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ + G L+ VR KR+ V V +PFVK +Y
Sbjct: 330 VGGPVAMGYVPAQAAAPGSRLYGEVRGKRLPVDVIALPFVKQSY 373
>gi|398962681|ref|ZP_10679331.1| glycine cleavage system T protein [Pseudomonas sp. GM30]
gi|398150699|gb|EJM39280.1| glycine cleavage system T protein [Pseudomonas sp. GM30]
Length = 374
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 141/239 (58%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLSKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTN+ GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNDNGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D DL Q +G + L E R L+A+QGP + T+L R +++ + F
Sbjct: 121 CK--DQDLAHLQQ----HIGDQCTITELF-EARALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ V+ GLGARDSL
Sbjct: 173 MQFNRVQLLGVDCFVSRSGYTGEDGFEISVPAADAEKLARALLAEPGVQAIGLGARDSL 231
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV+RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQNGVARKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGSVCSGGFGPTLGGPLAMGYLDSAYVTLDTPVWAIVRGKKVQMLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EARALLALQGPAAVTVLARLAP-EVAKMTFMQFNRVQLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ V+ GLGARDSL
Sbjct: 203 PAADAEKLARALLAEPGVQAIGLGARDSL 231
>gi|289649163|ref|ZP_06480506.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 374
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGTDA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTN+ GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLSVGMQRYAMFTNDAGGILDDLMVANLGNDQLMLVVNAACKNQDL- 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A R K L ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 127 ----AHLR-KHLAGHCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVK 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR GGFPGA + +Q ++GV++KR G P+R G EI +
Sbjct: 251 VEASLLWAISKVRRADGARAGGFPGAEHVFAQQQNGVAKKRVGLLPEERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ AY+ + ++W VR K+V ++V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLAGPLAMGYLNNAYTALDTQVWAMVRGKKVPMRVAKMPFVVQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + + C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVKLLDVQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|289623812|ref|ZP_06456766.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583012|ref|ZP_16658142.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|298159646|gb|EFI00689.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330867849|gb|EGH02558.1| glycine cleavage system T protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 374
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGTDA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTN+ GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLSVGMQRYAMFTNDAGGILDDLMVANLGNDQLMLVVNAACKNQDL- 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A R K L ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 127 ----AHLR-KHLAGHCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVK 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR GGFPGA + +Q ++GV++KR G P+R G EI +
Sbjct: 251 VEASLLWAISKVRRADGARAGGFPGAEHVFAQQQNGVAKKRVGLLPEERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ AY+ + ++W VR K+V ++V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLAGPLAMGYLNNAYTALDTQVWAMVRGKKVPMRVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + + C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVKLLDVQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|401420494|ref|XP_003874736.1| aminomethyltransferase, mitochondrial precursor,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490972|emb|CBZ26236.1| aminomethyltransferase, mitochondrial precursor,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 377
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 137/242 (56%), Gaps = 7/242 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+ HL+ KM F+G+ MP+ YG + + H +TR +FD+SH+ Q V G
Sbjct: 6 KKTALHSFHLAQQAKMNAFSGYHMPISYGRLGVLKEHFYTRQVAGIFDLSHVGQYEVRGA 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE+++E + D+ G G LS+ TN QGGI+DD IVTK + D LFLV NA + D
Sbjct: 66 DREKFMEHVTPVDLQRTQVGYGALSMLTNAQGGIKDDCIVTK-MADHLFLVLNAGCKGKD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR- 375
+ M + G D+ L L +R LIA+QGP ++ IL D D+ + FM R
Sbjct: 125 VAHMESVLREGAMKGADVQLVLL---DRSLIALQGPQAAAILSEFMD-DVPDMGFMQCRQ 180
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
I G+ +TR GYTGEDG EISV +VE L+S ++AGLGARDSL +
Sbjct: 181 KVNIKGMEVQVTRCGYTGEDGFEISVSNTDAVALVELLMS-RRAEMAGLGARDSLRLEAG 239
Query: 436 LN 437
LN
Sbjct: 240 LN 241
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQ----SQIKSGVSRKRTGFTSTGVPIRPGYEIFNA 58
+ +R + KRR GGF G I+ + K V R R G STG P+
Sbjct: 254 VAARFMWTISKRRMAEGGFIGYEPIKYFRDNASKGAVPRLRVGLVSTG-PVAREKTAIEV 312
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++VG +TSGCPSP LKKNIA+GY++ +K GV++ + VRD+RV +V FV + Y
Sbjct: 313 GGKQVGEVTSGCPSPCLKKNIAIGYLDRELAKDGVKVDLVVRDRRVAAEVVTPRFVPARY 372
Query: 119 YTPPK 123
Y P+
Sbjct: 373 YRKPQ 377
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR-PCTIAGIPCTLTRA 514
G D+ L L +R LIA+QGP ++ IL D D+ + FM R I G+ +TR
Sbjct: 139 GADVQLVLL---DRSLIALQGPQAAAILSEFMD-DVPDMGFMQCRQKVNIKGMEVQVTRC 194
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISV +VE L+S ++AGLGARDSL
Sbjct: 195 GYTGEDGFEISVSNTDAVALVELLMS-RRAEMAGLGARDSL 234
>gi|301384646|ref|ZP_07233064.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
Max13]
gi|302058901|ref|ZP_07250442.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
K40]
gi|302133014|ref|ZP_07259004.1| glycine cleavage system T protein [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 374
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 139/234 (59%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q ++G
Sbjct: 8 KTPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLSGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FTNE GGI DDL+V + L LV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNNELMLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ +I F E+R L+A+QGP + T+L R +++ + FM
Sbjct: 127 -----AHLRKHLAGRCEIEPLF---EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTR 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 178 VTLLGAQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q +GV +KR G P+R G +I N
Sbjct: 251 IQASLLWAISKVRRADGARAGGFPGAESVFAQQGNGVDKKRAGLLPQERTPVREGTQIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D +G + SG PSL +AMGY+ Y+ + +W VR K+V + VTKMPFV
Sbjct: 311 DQDVVIGTVCSGGFGPSLGGPLAMGYLHSDYTALDTPVWAMVRGKKVPMLVTKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + T+L R +++ + FM T+ G C ++R+GYTGEDG EISV
Sbjct: 144 EQRALLALQGPAAVTVLARLAP-EVAHMTFMQFTRVTLLGAQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|226944684|ref|YP_002799757.1| glycine cleavage system T protein [Azotobacter vinelandii DJ]
gi|226719611|gb|ACO78782.1| glycine cleavage system T protein [Azotobacter vinelandii DJ]
Length = 374
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 143/236 (60%), Gaps = 15/236 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLH+R + +FDVSHM Q ++ G
Sbjct: 8 KTPLHALHLELGARMVPFAGYEMPVQY-PLGVLKEHLHSRDQAGLFDVSHMGQILLRGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ EL G+ +LFT++ GGI DDL+V ++ LFLV NA+ ++ D+
Sbjct: 67 AGAALETLVPVDIVELPVGQQRYALFTDDNGGILDDLMVANLGDERLFLVVNAACKEQDL 126
Query: 318 DLM---VAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
+ + A+ + +SL E R L+A+QG + +L R +++ + FM
Sbjct: 127 AHLKTHIGARCQIESL----------FESRALLALQGLRAVDVLARLAP-EVAQMTFMRI 175
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ GIPC ++R+GYTGEDG EISVP E + ALL++ +V+ GLGARDSL
Sbjct: 176 AEIELLGIPCIVSRSGYTGEDGFEISVPVEHADKLARALLAEPEVQPIGLGARDSL 231
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRRE----TGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RRE GGFPGA+ I +Q + GV+ +R G P+R G EI +
Sbjct: 251 VEASLLWAISKARREGGARAGGFPGAARIFAQQQEGVACRRVGLLPQERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A +G +TSG PSL +AMGY+ A++ G E+W VR KRV +KV + PFV
Sbjct: 311 AQGAPIGKVTSGGFGPSLGAPLAMGYVASAHAAEGSEVWAIVRGKRVPMKVARTPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QG + +L R +++ + FM + GIPC ++R+GYTGEDG EISV
Sbjct: 144 ESRALLALQGLRAVDVLARLAP-EVAQMTFMRIAEIELLGIPCIVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + ALL++ +V+ GLGARDSL
Sbjct: 203 PVEHADKLARALLAEPEVQPIGLGARDSL 231
>gi|83774015|dbj|BAE64140.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 414
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 145/252 (57%), Gaps = 18/252 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLHL+ G KMVPFAGF MP+QY +S SH TR K S+FDVSHM+Q ++G
Sbjct: 13 RQTQLYDLHLARGAKMVPFAGFDMPLQYSDLSHVESHKWTREKASLFDVSHMVQHELSGP 72
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
E L + + + +L + TLS E GGI DD ++T+ +++ + V+NA RR
Sbjct: 73 GAIELLMKVTPSSLDKLGHNQSTLSCLLEEGTGGIIDDTVITRRTDETFYFVTNAGRRDE 132
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT-----DLDLSSLY 370
D+ + A +K +++ E+R L+A+QGPL++ +LQ + + DLS+LY
Sbjct: 133 DLAFLEAEISAYKQAHGADSIKWTILEDRALVALQGPLAAEVLQSYVHGSGPETDLSTLY 192
Query: 371 FMTSRPCTI-------AGIPCTLTRAGYTGEDGVEISVPGEQC----THIVEALLSDED- 418
F R + P ++R GYTGEDG EIS+P + E LL++ D
Sbjct: 193 FGNCRELYLTLPDGSRTPHPLLISRTGYTGEDGFEISIPTAGSPSLPAQVTELLLTNADQ 252
Query: 419 VKLAGLGARDSL 430
V+LAGL ARDSL
Sbjct: 253 VRLAGLAARDSL 264
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 12 GKRRRE--TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQR--- 62
GK RR+ T F GAS I Q+ S +S++R GFT G P R G I + ND+
Sbjct: 293 GKDRRDPATANFNGASAILPQLASPAKTLSQRRVGFTVEKGSPAREGAVIVDINDESRTP 352
Query: 63 VGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG ITSG PSP+L NIAMGY++ K G E+ + VR+K VT MP+V+S +Y
Sbjct: 353 VGIITSGLPSPTLGGTNIAMGYVKQGLHKKGTEVGILVRNKLRKATVTSMPWVESKFY 410
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 17/106 (16%)
Query: 467 EERGLIAVQGPLSSTILQRHT-----DLDLSSLYFMTSRPCTIA-------GIPCTLTRA 514
E+R L+A+QGPL++ +LQ + + DLS+LYF R + P ++R
Sbjct: 159 EDRALVALQGPLAAEVLQSYVHGSGPETDLSTLYFGNCRELYLTLPDGSRTPHPLLISRT 218
Query: 515 GYTGEDGVEISVPGEQC----THIVEALLSDED-VKLAGLGARDSL 555
GYTGEDG EIS+P + E LL++ D V+LAGL ARDSL
Sbjct: 219 GYTGEDGFEISIPTAGSPSLPAQVTELLLTNADQVRLAGLAARDSL 264
>gi|320586804|gb|EFW99467.1| glycine cleavage system t protein [Grosmannia clavigera kw1407]
Length = 428
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 155/267 (58%), Gaps = 25/267 (9%)
Query: 187 FSPGSSPSAEQR-TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDV 245
++ GSS A R T LYDLH++HGGKMVPF GF MPVQY +S++ASH TR+K S+FDV
Sbjct: 19 YASGSSQEAALRKTALYDLHVAHGGKMVPFGGFHMPVQYSGLSVSASHTFTRTKASLFDV 78
Query: 246 SHMLQTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSL 304
HM+Q + G +LE + + + L+ + TLS L GGI DD I+T+ +
Sbjct: 79 GHMVQRHLRGAGAAAFLERLTPSGISALETHRSTLSALLWEHSGGIVDDTIITRLGPEHF 138
Query: 305 FLVSNASRRKVD---MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTI---- 357
++V+NA R+ D + +A + KSL +H + L + GL+A+QGPL+S I
Sbjct: 139 YVVTNAGCREKDDAFLGRWLADEGLLKSLPGPVHHEELV--DWGLVALQGPLASAILGSV 196
Query: 358 LQRHTDLDLSSLYFMTSRPCTI---AG--------IPCTLTRAGYTGEDGVEISVPGEQC 406
L L L+F S+ + AG P ++R GYTGEDG EIS+P E+
Sbjct: 197 LADGEAATLPGLFFGGSQYGRLQLRAGSSSAAELSSPLLISRGGYTGEDGFEISIPPEET 256
Query: 407 THIVEALLSD---EDVKLAGLGARDSL 430
+ EALL+ E ++LAGLGARDSL
Sbjct: 257 VAVTEALLAAGTPERLQLAGLGARDSL 283
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIKS------GVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I P K RR F GA+ I Q++ GVSR+R G G P R G +I +
Sbjct: 310 IIP-KARRNDYSFHGAATILEQLRPRSQGGLGVSRRRIGLLVDGAPAREGADIVDEAGDV 368
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G +TSGCPSP+L +NIAM YI+ K G + V VR + VTKMPFV + Y+
Sbjct: 369 IGHVTSGCPSPTLGRNIAMAYIQDGKHKAGTAVGVVVRGRTRPAVVTKMPFVPTKYW 425
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 20/122 (16%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTIL----QRHTDLDLSSLYFMTSRPCTI--- 504
KSL +H + L + GL+A+QGPL+S IL L L+F S+ +
Sbjct: 164 LKSLPGPVHHEELV--DWGLVALQGPLASAILGSVLADGEAATLPGLFFGGSQYGRLQLR 221
Query: 505 AGI--------PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARD 553
AG P ++R GYTGEDG EIS+P E+ + EALL+ E ++LAGLGARD
Sbjct: 222 AGSSSAAELSSPLLISRGGYTGEDGFEISIPPEETVAVTEALLAAGTPERLQLAGLGARD 281
Query: 554 SL 555
SL
Sbjct: 282 SL 283
>gi|157877272|ref|XP_001686963.1| putative glycine synthase [Leishmania major strain Friedlin]
gi|68130038|emb|CAJ09346.1| putative glycine synthase [Leishmania major strain Friedlin]
Length = 394
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 138/242 (57%), Gaps = 7/242 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+ HL+ KM FAG+ MP+ YG + + HL+TR +FDVSH+ Q V G
Sbjct: 6 KKTALHLFHLAQQAKMDAFAGYHMPISYGRLGVLKEHLYTREVAGIFDVSHVGQYEVRGA 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE +LE + D+ + G G L++ TN QGGI+DD IVTK + D LFLV NA ++ D
Sbjct: 66 DRERFLEHVTPVDLQRIRAGHGALTMLTNAQGGIKDDCIVTK-MADHLFLVLNAGCKEKD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M + G D+ L L +R LIA+QGP ++ IL D D+ + FM R
Sbjct: 125 VAHMESVLRESAMKGADVQLVPL---DRSLIALQGPQAAAILSEFMD-DVPGMGFMQCRQ 180
Query: 377 -CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
I G+ +TR GYTGEDG E+SV +VE L+S ++ GLGARDSL +
Sbjct: 181 RVNIKGMEVQVTRCGYTGEDGFELSVSNTDIVALVELLMS-RKAEMIGLGARDSLRLEAG 239
Query: 436 LN 437
LN
Sbjct: 240 LN 241
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQ----SQIKSGVSRKRTGFTSTGVPIRPGYEIFNA 58
+ +R + KRR GGF G I+ + K V R R G STG P+ +
Sbjct: 254 VAARFMWVISKRRMAEGGFIGYEPIKYLRDNASKGAVPRLRVGLVSTG-PVAREKTVIEV 312
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ VG +TSGCPSP LKKNIA+GY++ +K GV++ + VR +RV V PFV + Y
Sbjct: 313 GGKPVGEVTSGCPSPCLKKNIAIGYLDRELAKDGVKVDLVVRGRRVAAVVVTPPFVPARY 372
Query: 119 YTPPKIRKVKKK 130
Y P ++ +++
Sbjct: 373 YRKPPVKGTEER 384
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP-CTIAGIPCTLTRA 514
G D+ L P +R LIA+QGP ++ IL D D+ + FM R I G+ +TR
Sbjct: 139 GADVQL---VPLDRSLIALQGPQAAAILSEFMD-DVPGMGFMQCRQRVNIKGMEVQVTRC 194
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG E+SV +VE L+S ++ GLGARDSL
Sbjct: 195 GYTGEDGFELSVSNTDIVALVELLMS-RKAEMIGLGARDSL 234
>gi|404403338|ref|ZP_10994922.1| glycine cleavage system T protein [Pseudomonas fuscovaginae
UPB0736]
Length = 374
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 141/233 (60%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLQLGARMVPFAGYEMPVQY-PLGVLKEHQHTREQAGLFDVSHMGQIRLVGAA 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G+ ++FTN GGI DDL+V D LFLV NA+ ++ D+
Sbjct: 67 AAKALEALVPVDIVDLPVGQQRYAMFTNADGGILDDLMVANLGNDELFLVVNAACKEQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ K LG +Q L EER L+A+QGP + T+L R ++S + FM P
Sbjct: 127 AHLQ------KHLGHLCEVQPLF-EERALLALQGPAAVTVLARLAP-EVSRMTFMQFAPL 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGFEISVPAASAECLARSLLAETEVEAIGLGARDSL 231
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR GGFPGA I +Q + GV RKR G P+R G EI +
Sbjct: 251 VEASLLWAVSKARRADGARAGGFPGAEQIFAQQQHGVKRKRVGLLPQERTPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A +G + SG PSL +AMGY++ AY + E+W VR KR+ +KV+KMPFV
Sbjct: 311 AAGTVIGNVCSGGFGPSLGAPLAMGYLDSAYCALDSEVWAIVRGKRIPLKVSKMPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 460 HLQFLSP--EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
HL + P EER L+A+QGP + T+L R ++S + FM P + G+ C ++R+GYT
Sbjct: 135 HLCEVQPLFEERALLALQGPAAVTVLARLAP-EVSRMTFMQFAPLRLLGVDCYVSRSGYT 193
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISVP + +LL++ +V+ GLGARDSL
Sbjct: 194 GEDGFEISVPAASAECLARSLLAETEVEAIGLGARDSL 231
>gi|416018330|ref|ZP_11565317.1| glycine cleavage system T protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|416025398|ref|ZP_11569132.1| glycine cleavage system T protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320322885|gb|EFW78976.1| glycine cleavage system T protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329806|gb|EFW85794.1| glycine cleavage system T protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 374
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGTDA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTN+ GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGNDQLMLVVNAACKNQDL- 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A R K L ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 127 ----AHLR-KHLAGHCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVK 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR GGFPGA + +Q ++GV++KR G P+R G EI +
Sbjct: 251 VEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVGLLPEERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ AY+ + ++W VR K+V ++V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLAGPLAMGYLNNAYTALDTQVWAMVRGKKVPMRVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + + C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVKLLDVQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|374703648|ref|ZP_09710518.1| glycine cleavage system T protein [Pseudomonas sp. S9]
Length = 374
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 143/233 (61%), Gaps = 9/233 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HL TR + +FDVSHM Q V+ G +
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHLQTRDQAGLFDVSHMGQLVLRGAN 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ +L G ++FT+E GGI DDL+V +D+LFLV NA+ + D+
Sbjct: 67 AAKALETLVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGDDTLFLVVNAACKDQDL 126
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R K +G+ ++ L E R L+A+QGP + +L R +++ + FM
Sbjct: 127 -----AHLR-KHIGEQCEIESLF-ETRALLALQGPKAVDVLSRLAP-EVAKMTFMQFAQV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISV E + +LL++ +V+ GLGARDSL
Sbjct: 179 RLLGVDCYVSRSGYTGEDGYEISVSNESAETLARSLLAEPEVEAIGLGARDSL 231
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++GV+ KR G VP+R G EI +
Sbjct: 251 IEASLLWAMSKPRRADGARAGGFPGAEQIFAQQQAGVASKRVGLLPQERVPVREGAEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+ +GA+TSG P+L +AMGY++ ++ VG ++W VR KRV +KV K PFV+
Sbjct: 311 ADGNIIGAVTSGGFGPTLGAPVAMGYVQASHVPVGSDVWAIVRGKRVPMKVAKTPFVEQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K +G+ ++ L E R L+A+QGP + +L R +++ + FM + G+ C ++
Sbjct: 131 KHIGEQCEIESLF-ETRALLALQGPKAVDVLSRLAP-EVAKMTFMQFAQVRLLGVDCYVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISV E + +LL++ +V+ GLGARDSL
Sbjct: 189 RSGYTGEDGYEISVSNESAETLARSLLAEPEVEAIGLGARDSL 231
>gi|300024300|ref|YP_003756911.1| glycine cleavage system protein T [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526121|gb|ADJ24590.1| glycine cleavage system T protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 382
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 146/248 (58%), Gaps = 19/248 (7%)
Query: 192 SPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S S +RTPLYD H+ G +MVPFAG+ MPVQY ++ I A H TR+ S+FD+SHM Q
Sbjct: 7 SKSPLKRTPLYDAHVEAGARMVPFAGYEMPVQY-SLGIIAEHTWTRNHASLFDISHMGQA 65
Query: 252 VVT---GKHR--EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS--- 303
VVT GKH LE++ AD+ EL PG+ S N GG+ DDL+VT+ E
Sbjct: 66 VVTAADGKHETVARALEALVPADIVELVPGQQRYSQLLNASGGVIDDLMVTRPEESDESG 125
Query: 304 -LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT 362
L LV NASR+ +D++ + + L + ++ S + L+A+QGP S +L+
Sbjct: 126 RLILVLNASRKDIDIEHIA------RQLCEGTRIE--SCPDLALLALQGPKSGDVLEPIC 177
Query: 363 DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLA 422
D L FM + IAG C ++R+GYTGEDG EISV + ALL++++V+
Sbjct: 178 P-DSRKLAFMQATRTQIAGCDCFVSRSGYTGEDGFEISVGASDAVTLWRALLANDEVRPC 236
Query: 423 GLGARDSL 430
GLGARDSL
Sbjct: 237 GLGARDSL 244
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 14 RRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPS 72
+RR TGGFPGA I +I + +R R G G P R G +I + +G +TSG S
Sbjct: 274 KRRRTGGFPGAERILGEISASPARTRVGLHFIGRAPAREGAKILSKMGDEIGVVTSGGYS 333
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P+LK+ IA+ Y+ P Y+ L V VR + +D KV +PFV Y
Sbjct: 334 PTLKQPIALAYVPPEYASADTPLTVIVRGEPLDAKVVPLPFVPHRY 379
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 470 GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGE 529
L+A+QGP S +L+ D L FM + IAG C ++R+GYTGEDG EISV
Sbjct: 160 ALLALQGPKSGDVLEPICP-DSRKLAFMQATRTQIAGCDCFVSRSGYTGEDGFEISVGAS 218
Query: 530 QCTHIVEALLSDEDVKLAGLGARDSL 555
+ ALL++++V+ GLGARDSL
Sbjct: 219 DAVTLWRALLANDEVRPCGLGARDSL 244
>gi|384217680|ref|YP_005608846.1| glycine cleavage system component T [Bradyrhizobium japonicum USDA
6]
gi|354956579|dbj|BAL09258.1| glycine cleavage system component T [Bradyrhizobium japonicum USDA
6]
Length = 382
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 139/239 (58%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+RTPL+ LH+S GGKMVPFAG+ MPVQY A + HLHTRS +FDVSHM Q +
Sbjct: 11 KRTPLHGLHVSLGGKMVPFAGYDMPVQYPA-GVLKEHLHTRSSAGLFDVSHMGQLALRPK 69
Query: 254 TGKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + LE + D+ + PG+ + FTN GGI DDL+V D LFLV NA+
Sbjct: 70 SGKVEDAARALERLVPQDIVAIAPGRQRYAQFTNPDGGILDDLMVA-NFGDHLFLVVNAA 128
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + A L D + L ++R LIA+QGP + L + + ++ F
Sbjct: 129 CKDADEAHLRA------HLSDDCIIDSL--QDRALIALQGPKAEAALAQLC-AEAPAMKF 179
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + P +AG+ C ++R+GYTGEDG EISVP H+ LL + DV GLGARDSL
Sbjct: 180 MDAGPHKVAGLDCFVSRSGYTGEDGFEISVPATHAEHLARTLLENPDVMPIGLGARDSL 238
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPS 74
GGFPGA I + +G SR+R G + G P+R G +F A + +G +TSG PS
Sbjct: 277 AGGFPGAETILAYFDNGASRRRVGLRTEGRAPVREGALLFADAAGGEPIGKVTSGGFGPS 336
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ A S + +L+ VR +R+ + V MPFVK+ Y
Sbjct: 337 LNAPVAMGYVPTASSALDTKLFAEVRGQRLPLTVAAMPFVKNTY 380
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 524
S ++R LIA+QGP + L + + ++ FM + P +AG+ C ++R+GYTGEDG EI
Sbjct: 149 SLQDRALIALQGPKAEAALAQLC-AEAPAMKFMDAGPHKVAGLDCFVSRSGYTGEDGFEI 207
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
SVP H+ LL + DV GLGARDSL
Sbjct: 208 SVPATHAEHLARTLLENPDVMPIGLGARDSL 238
>gi|71736569|ref|YP_273428.1| glycine cleavage system T protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557122|gb|AAZ36333.1| glycine cleavage system T protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 374
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGTDA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTN+ GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGNDQLMLVVNAACKNQDL- 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A R K L ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 127 ----AHLR-KHLAGHCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVK 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 180 LLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 231
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
+ + LL K RR GGFPGA + +Q ++GV++KR G P+R G EI +
Sbjct: 251 VEASLLWAISKVRRADGARAGGFPGAEQVFAQQQNGVAKKRVGLLPEERTPVREGTEIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G + SG PSL +AMGY+ AY+ + ++W VR K+V ++V KMPFV
Sbjct: 311 EQGAVIGTVCSGGFGPSLAGPLAMGYLNNAYTALDTQVWAMVRGKKVPMRVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + + C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVKLLDVQCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 203 PAEQAEALARRLLEEPEVAPIGLGARDSL 231
>gi|254500876|ref|ZP_05113027.1| glycine cleavage system T protein [Labrenzia alexandrii DFL-11]
gi|222436947|gb|EEE43626.1| glycine cleavage system T protein [Labrenzia alexandrii DFL-11]
Length = 383
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/241 (44%), Positives = 147/241 (60%), Gaps = 17/241 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+DLH+ GGKMVPFAG+SMPVQY + I H HTR+K +FDVSHM Q V+ G
Sbjct: 11 KQTPLHDLHIELGGKMVPFAGYSMPVQY-KLGIMGEHQHTRAKAGLFDVSHMGQAVLIGP 69
Query: 257 HRE---EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS----LFLVSN 309
E + LE++ ++ EL G+ ++ NE GGI DDL+VT+ L+ + L LV N
Sbjct: 70 DHETTAKALEALTPSNFVELGHGRQRYTVLLNEDGGIIDDLMVTRPLDKNDDGRLLLVVN 129
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A+R+ +D + A +L + L+ A++R LIAVQGP + + H + L
Sbjct: 130 AARKDIDYAHLRA------NLPDTVKLEV--ADDRALIAVQGPEAVAAVAAHAPA-AAEL 180
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FM + P GI C + RAGYTGEDGVE+SVP I ALL+D+ V+ GLGARDS
Sbjct: 181 GFMAAAPMEFDGIACHIARAGYTGEDGVEMSVPAGAAEAIARALLADDRVEAIGLGARDS 240
Query: 430 L 430
L
Sbjct: 241 L 241
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR+ GGF GA IQ ++ G R R G G P R G EI + +G++TSG
Sbjct: 271 KRRRDEGGFLGAERIQKELADGTDRIRVGLRLDGKAPAREGAEIALPDGDVIGSLTSGGF 330
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
+P++ IAMGY+ ++ G +L + VR++R+ V+ MPFV + Y+ PK
Sbjct: 331 APTVGAPIAMGYVPAEHASEGTQLELIVRNRRLPATVSAMPFVPNRYFRKPK 382
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R LIAVQGP + + H + L FM + P GI C + RAGYTGEDGVE+SV
Sbjct: 154 DDRALIAVQGPEAVAAVAAHAPA-AAELGFMAAAPMEFDGIACHIARAGYTGEDGVEMSV 212
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P I ALL+D+ V+ GLGARDSL
Sbjct: 213 PAGAAEAIARALLADDRVEAIGLGARDSL 241
>gi|367013348|ref|XP_003681174.1| hypothetical protein TDEL_0D03790 [Torulaspora delbrueckii]
gi|359748834|emb|CCE91963.1| hypothetical protein TDEL_0D03790 [Torulaspora delbrueckii]
Length = 396
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 140/247 (56%), Gaps = 8/247 (3%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
F+ + S ++T LYDLH++ GG MVPFAG+SMPV Y + SH TR+ +FDVS
Sbjct: 10 FNSSQTASNLKKTALYDLHVALGGTMVPFAGYSMPVLYQGQTHIESHNWTRTNAGLFDVS 69
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
HMLQ+ +TG E+L + D L+ G GTLS+ NE GGI DD ++TK E+ ++
Sbjct: 70 HMLQSRLTGAGATEFLHKVTPTDFQALEQGNGTLSVLLNEHGGIVDDTLITKQRENDFYV 129
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ--RHTDL 364
V+NA + D + + + K+ D Q+ + R L+A+QGP + + +
Sbjct: 130 VTNAGCIERDSEFI---RSEIKNFTGDC--QWDVVQGRSLLALQGPKAHEVFEPLLREGQ 184
Query: 365 DLSSLYFMTSRPCTI-AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAG 423
+ L+F R + GIP + R+GYTGEDG EIS+P ++ + LL ++ K G
Sbjct: 185 TVKDLFFGQRRSYELFNGIPVDVARSGYTGEDGFEISLPNDKAVEFAQLLLDNQHTKPIG 244
Query: 424 LGARDSL 430
L ARDSL
Sbjct: 245 LAARDSL 251
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 6 RLLIFPGKRRRETGGFPGASIIQSQIKSG-VSRKRTGFT--STGVPIRPGYEIF-NANDQ 61
R +I +R E F G I QI S S R GF G R +IF N
Sbjct: 276 RWVISKSRRAGEGTKFNGYEKIMDQINSNSYSDVRIGFKYLKKGPAARTDAKIFLPDNKT 335
Query: 62 RVGAITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
+VG +TSG SPSL NI GY+ A K G +L V+VR+K +++ K+P V ++YY
Sbjct: 336 QVGVVTSGSASPSLGNINIGQGYVSKANRKTGTQLSVQVRNKFFPIELAKLPLVPTHYYK 395
Query: 121 P 121
P
Sbjct: 396 P 396
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 469 RGLIAVQGPLSSTILQ--RHTDLDLSSLYFMTSRPCTI-AGIPCTLTRAGYTGEDGVEIS 525
R L+A+QGP + + + + L+F R + GIP + R+GYTGEDG EIS
Sbjct: 162 RSLLALQGPKAHEVFEPLLREGQTVKDLFFGQRRSYELFNGIPVDVARSGYTGEDGFEIS 221
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+P ++ + LL ++ K GL ARDSL
Sbjct: 222 LPNDKAVEFAQLLLDNQHTKPIGLAARDSL 251
>gi|182677726|ref|YP_001831872.1| glycine cleavage system T protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182633609|gb|ACB94383.1| glycine cleavage system T protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 384
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 146/248 (58%), Gaps = 22/248 (8%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
GS+P A TPLY LH + G +MVPFA ++MPVQY I HLHTR+K +FDVSHM
Sbjct: 12 GSTP-ALLHTPLYALHCARGARMVPFACYAMPVQY-PTGILEEHLHTRAKAGLFDVSHMG 69
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS----LF 305
Q ++ G+ LE++ D+ L PG+ + N +GGI DDL+VT+ +D+ LF
Sbjct: 70 QALLEGQGAAARLETLVPGDLTTLAPGRMRYTQLLNPEGGILDDLMVTRLADDAAGERLF 129
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGK---DIHLQFLSAEERGLIAVQGPLSSTILQRHT 362
LV NA+ + AQD F +G D+ L L E+R L+A+QGP ++T+L +H
Sbjct: 130 LVVNAATK---------AQD-FAHIGASLPDLRLTLL--EDRALLALQGPSAATVLAKHF 177
Query: 363 DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLA 422
++++ FM+ G ++R+GYTGEDG EI+VP E LL DE+V
Sbjct: 178 P-AVATMPFMSLIETEREGALWRISRSGYTGEDGFEIAVPAGAAEAFAETLLGDEEVWPI 236
Query: 423 GLGARDSL 430
GLGARDSL
Sbjct: 237 GLGARDSL 244
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQ 61
I + LL KRRRE GGFPGA+ +Q +I G +R+R G G +P R G +I +
Sbjct: 264 IEAGLLWSISKRRREGGGFPGAARVQREIAEGPARRRVGLKIEGKIPAREGAKIETLEGE 323
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G +TSG +PSL IAMGY+ A++ G L V VR K + +T MPFV ++YY
Sbjct: 324 VIGLVTSGGFAPSLGAPIAMGYVASAHAANGTALQVIVRGKPLAATITSMPFVPNHYY 381
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
D+ L L E+R L+A+QGP ++T+L +H ++++ FM+ G ++R+GYT
Sbjct: 150 DLRLTLL--EDRALLALQGPSAATVLAKHFP-AVATMPFMSLIETEREGALWRISRSGYT 206
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EI+VP E LL DE+V GLGARDSL
Sbjct: 207 GEDGFEIAVPAGAAEAFAETLLGDEEVWPIGLGARDSL 244
>gi|27380862|ref|NP_772391.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium
japonicum USDA 110]
gi|27354028|dbj|BAC51016.1| glycine cleavage system component T [Bradyrhizobium japonicum USDA
110]
Length = 382
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 137/239 (57%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYDLH+S GGKMVPFAG+ MPVQY A + HLHTRS+ +FDVSHM Q + K
Sbjct: 11 KRTPLYDLHVSLGGKMVPFAGYDMPVQYPA-GVLKEHLHTRSQAGLFDVSHMGQLRLLPK 69
Query: 257 H-----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
LE + D+ + G+ + FTN GGI DDL+V D LFLV NA+
Sbjct: 70 SGRVEDAARALERLVPQDIVAIALGRQRYAQFTNADGGILDDLMVA-NFGDHLFLVVNAA 128
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + A L D + L+ +R LIA+QGP + +L + S+ F
Sbjct: 129 CKAEDEAHLRA------HLSDDCVIDSLA--DRALIALQGPKAEAVLAKFC-AKAPSMKF 179
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + P +AGI C ++R+GYTGEDG EISVP + + LL + DV GLGARDSL
Sbjct: 180 MDAGPHEVAGIKCFVSRSGYTGEDGFEISVPAADAERLAKTLLENPDVVPIGLGARDSL 238
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAITSGCPSPS 74
GGFPGA I + G +R+R G + G P+R G +F +A+ + +G +TSG PS
Sbjct: 277 AGGFPGAEKILAHFDQGAARRRVGLRAQGRAPVREGALLFADSASAEPIGQVTSGGFGPS 336
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ A S +G L+ VR +R+ + V MPFVK+ Y
Sbjct: 337 LNAPVAMGYVPTASSALGTSLFAEVRGQRLPMTVAAMPFVKNTY 380
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L + S+ FM + P +AGI C ++R+GYTGEDG EISVP
Sbjct: 152 DRALIALQGPKAEAVLAKFC-AKAPSMKFMDAGPHEVAGIKCFVSRSGYTGEDGFEISVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL + DV GLGARDSL
Sbjct: 211 AADAERLAKTLLENPDVVPIGLGARDSL 238
>gi|157877283|ref|XP_001686964.1| putative glycine synthase [Leishmania major strain Friedlin]
gi|68130039|emb|CAJ09347.1| putative glycine synthase [Leishmania major strain Friedlin]
Length = 377
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 138/242 (57%), Gaps = 7/242 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+ HL+ KM FAG+ MP+ YG + + HL+TR +FDVSH+ Q V G
Sbjct: 6 KKTALHLFHLAQQAKMDAFAGYHMPISYGRLGVLKEHLYTREVAGIFDVSHVGQYEVRGA 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE +LE + D+ + G G L++ TN QGGI+DD IVTK + D LFLV NA ++ D
Sbjct: 66 DRERFLEHVTPVDLQRIRAGHGALTMLTNAQGGIKDDCIVTK-MADHLFLVLNAGCKEKD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M + G D+ L L +R LIA+QGP ++ IL D D+ + FM R
Sbjct: 125 VAHMESVLRESAMKGADVQLVPL---DRSLIALQGPQAAAILSEFMD-DVPGMGFMQCRQ 180
Query: 377 -CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
I G+ +TR GYTGEDG E+SV +VE L+S ++ GLGARDSL +
Sbjct: 181 RVNIKGMEVQVTRCGYTGEDGFELSVSNTDIVALVELLMS-RKAEMIGLGARDSLRLEAG 239
Query: 436 LN 437
LN
Sbjct: 240 LN 241
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQ----SQIKSGVSRKRTGFTSTGVPIRPGYEIFNA 58
+ +R + KRR GGF G I+ + K V R R G STG P+ +
Sbjct: 254 VAARFMWVISKRRMAEGGFIGYEPIKYLRDNASKGAVPRLRVGLVSTG-PVAREKTVIEV 312
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ VG +TSGCPSP LKKNIA+GY++ +K GV++ + VR +RV V PFV + Y
Sbjct: 313 GGKPVGEVTSGCPSPCLKKNIAIGYLDRELAKDGVKVDLVVRGRRVAAVVVTPPFVPARY 372
Query: 119 YTPPK 123
Y PK
Sbjct: 373 YRKPK 377
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP-CTIAGIPCTLTRA 514
G D+ L P +R LIA+QGP ++ IL D D+ + FM R I G+ +TR
Sbjct: 139 GADVQL---VPLDRSLIALQGPQAAAILSEFMD-DVPGMGFMQCRQRVNIKGMEVQVTRC 194
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG E+SV +VE L+S ++ GLGARDSL
Sbjct: 195 GYTGEDGFELSVSNTDIVALVELLMS-RKAEMIGLGARDSL 234
>gi|146103743|ref|XP_001469634.1| putative glycine synthase [Leishmania infantum JPCM5]
gi|398024706|ref|XP_003865514.1| aminomethyltransferase, mitochondrial precursor, putative
[Leishmania donovani]
gi|134074004|emb|CAM72744.1| putative glycine synthase [Leishmania infantum JPCM5]
gi|322503751|emb|CBZ38837.1| aminomethyltransferase, mitochondrial precursor, putative
[Leishmania donovani]
Length = 377
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 137/242 (56%), Gaps = 7/242 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+ HL+ KM FAG+ MP+ YG + HL+TR +FDVSHM Q V G
Sbjct: 6 KKTALHSFHLAQQAKMDAFAGYHMPISYGRFGVLKEHLYTRQVAGIFDVSHMGQYEVRGA 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE+++E + D+ G+G L++ TN QGGI+DD IVT+ + D LFLV NA ++ D
Sbjct: 66 DREKFMEHVTPVDLQRTRAGQGALTMLTNAQGGIKDDCIVTR-MADHLFLVLNAGCKEKD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M G D+ L L +R LIA+QGP ++ IL D D+ + FM R
Sbjct: 125 VAHMERVLREGAMKGADVQLVPL---DRSLIALQGPQAAAILSEFMD-DVPDMGFMQCRQ 180
Query: 377 -CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
+I G+ +TR GYTGEDG E+SV VE L+S ++ GLGARDSL +
Sbjct: 181 RVSIKGMEVQVTRCGYTGEDGFEMSVSNTDIVAFVELLMS-RKAEMIGLGARDSLRLEAG 239
Query: 436 LN 437
LN
Sbjct: 240 LN 241
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQ----SQIKSGVSRKRTGFTSTGVPIRPGYEIFNA 58
+ +R + KRR GGF G I+ + K V R R G STG P+ +
Sbjct: 254 VAARFMWAISKRRMAEGGFIGYEPIKYFRDNASKGAVPRLRVGLVSTG-PVAREKTVIEV 312
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ VG +TSGCPSP LKKNIA+GY++ +K G ++ + VR +RV +V PFV + Y
Sbjct: 313 GGKPVGEVTSGCPSPCLKKNIAIGYLDRKLAKDGAKVDLVVRGRRVAAEVVTPPFVPTRY 372
Query: 119 YTPPK 123
Y PK
Sbjct: 373 YRKPK 377
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP-CTIAGIPCTLTRA 514
G D+ L P +R LIA+QGP ++ IL D D+ + FM R +I G+ +TR
Sbjct: 139 GADVQL---VPLDRSLIALQGPQAAAILSEFMD-DVPDMGFMQCRQRVSIKGMEVQVTRC 194
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG E+SV VE L+S ++ GLGARDSL
Sbjct: 195 GYTGEDGFEMSVSNTDIVAFVELLMS-RKAEMIGLGARDSL 234
>gi|146103747|ref|XP_001469635.1| putative glycine synthase [Leishmania infantum JPCM5]
gi|134074005|emb|CAM72745.1| putative glycine synthase [Leishmania infantum JPCM5]
Length = 377
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 137/242 (56%), Gaps = 7/242 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+ HL+ KM FAG+ MP+ YG + HL+TR +FDVSHM Q V G
Sbjct: 6 KKTALHSFHLAQQAKMDAFAGYHMPISYGRFGVLKEHLYTRQVAGIFDVSHMGQYEVRGA 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE+++E + D+ G+G L++ TN QGGI+DD IVT+ + D LFLV NA ++ D
Sbjct: 66 DREKFMEHVTPVDLQRTRAGQGALTMLTNAQGGIKDDCIVTR-MADHLFLVLNAGCKEKD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M G D+ L L +R LIA+QGP ++ IL D D+ + FM R
Sbjct: 125 VAHMERVLREGAMKGADVQLVPL---DRSLIALQGPQAAAILSEFMD-DVPDMGFMQCRQ 180
Query: 377 -CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
+I G+ +TR GYTGEDG E+SV VE L+S ++ GLGARDSL +
Sbjct: 181 RVSIKGMEVQVTRCGYTGEDGFEMSVSNTDIVAFVELLMS-RKAEMIGLGARDSLRLEAG 239
Query: 436 LN 437
LN
Sbjct: 240 LN 241
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQ----SQIKSGVSRKRTGFTSTGVPIRPGYEIFNA 58
+ +R + KRR GGF G I+ + K V R R G STG P+ +
Sbjct: 254 VAARFMWAISKRRMAEGGFIGYEPIKYFRDNASKGAVPRLRVGLVSTG-PVAREKTVIEV 312
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ VG +TSGCPSP LKKNIA+GY++ +K G ++ + VR +RV +V FV + Y
Sbjct: 313 GGKPVGEVTSGCPSPCLKKNIAIGYLDRKLAKDGAKVDLVVRGRRVAAEVVTPRFVPTRY 372
Query: 119 Y 119
Y
Sbjct: 373 Y 373
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP-CTIAGIPCTLTRA 514
G D+ L P +R LIA+QGP ++ IL D D+ + FM R +I G+ +TR
Sbjct: 139 GADVQL---VPLDRSLIALQGPQAAAILSEFMD-DVPDMGFMQCRQRVSIKGMEVQVTRC 194
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG E+SV VE L+S ++ GLGARDSL
Sbjct: 195 GYTGEDGFEMSVSNTDIVAFVELLMS-RKAEMIGLGARDSL 234
>gi|38481924|gb|AAR21108.1| mitochondrial glycine decarboxylase T-protein [Thalassiosira
weissflogii]
Length = 414
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 137/240 (57%), Gaps = 12/240 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVS--ITASHLHTRS--KVSVFDVSHMLQTVV 253
+T LYDLH GG MVPFAG+ +PV Y + + HL R K S+FDVSHM Q
Sbjct: 34 KTALYDLHKELGGDMVPFAGYELPVLYKGENGGVMKEHLWCREDGKASLFDVSHMGQIRW 93
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
GK R ++E + V D+ L G G LSL TN QGGI DD ++T D +++V N + +
Sbjct: 94 HGKDRTAFIEKLVVGDIASLPAGSGCLSLITNAQGGIIDDTVITNA-GDYIYMVVNGATK 152
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYF 371
DM +++ + D+ +++L E L AVQGP ++ +++ DL+S+ F
Sbjct: 153 FGDMKHF---KEQLEQFDGDVSMEYLE-ESMQLFAVQGPGAAEAVKKLLPDGFDLTSMAF 208
Query: 372 MTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
MT T+ GI C +TR GYTGEDG EI++P E I L+SD V GLGARDSL
Sbjct: 209 MTGTDTTLDGIEGCRITRCGYTGEDGFEIAMPAEHAVSIASKLISDPTVNPTGLGARDSL 268
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 11 PGKRRRETGGFPGA-SIIQSQIK-SGVSRKRTGFTSTGVPIRPGYEIFNAN-DQRVGAIT 67
P RRR GGF GA +I++ K +SRKR G P R EI++A+ + ++G +T
Sbjct: 299 PKSRRRLEGGFIGAENILKPDGKFKAISRKRVGIMGMKAPARDHTEIYDASGENKIGEVT 358
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SG SP LKK IAMGY+E SK G E+ +++R K +VTKMPFV+S YY P+
Sbjct: 359 SGTFSPCLKKPIAMGYVEKDASKAGTEVLLKIRGKMQKAEVTKMPFVESRYYRVPE 414
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 434 ITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDL 491
+ +N G +K ++ + D+ +++L E L AVQGP ++ +++ DL
Sbjct: 145 MVVNGATKFGDMKHFKEQLEQFDGDVSMEYLE-ESMQLFAVQGPGAAEAVKKLLPDGFDL 203
Query: 492 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 550
+S+ FMT T+ GI C +TR GYTGEDG EI++P E I L+SD V GLG
Sbjct: 204 TSMAFMTGTDTTLDGIEGCRITRCGYTGEDGFEIAMPAEHAVSIASKLISDPTVNPTGLG 263
Query: 551 ARDSL 555
ARDSL
Sbjct: 264 ARDSL 268
>gi|329113560|ref|ZP_08242340.1| Aminomethyltransferase [Acetobacter pomorum DM001]
gi|326697082|gb|EGE48743.1| Aminomethyltransferase [Acetobacter pomorum DM001]
Length = 389
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 140/237 (59%), Gaps = 16/237 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK-- 256
TPLY LH GGKMVPFAG++MP+QY A I A H H R V +FDVSHM Q ++ +
Sbjct: 20 TPLYSLHEESGGKMVPFAGYAMPLQY-ADGIMAEHRHVREHVGLFDVSHMGQVLLRPRSG 78
Query: 257 ---HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ LE + AD+ L G+ + FTN +GGI DDL+V + LED L LV NA+ +
Sbjct: 79 DVDNAALALEKLVPADIAALKHGRQRYTQFTNAEGGILDDLMVAR-LEDGLLLVVNAACK 137
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D++L+ +A L + ++ E+R L+A+QGP + +L + D+ + FM
Sbjct: 138 EADLELLQSA------LVAECVVE--PQEDRALLALQGPEAEQVLAAFAE-DVRKMMFMD 188
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
R + G C ++R+GYTGEDG EISV + + LL +VKL GLGARDSL
Sbjct: 189 VRTLDVDGARCVISRSGYTGEDGFEISVSAKDADRVARKLLEQPNVKLIGLGARDSL 245
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + +L + D+ + FM R + G C ++R+GYTGEDG EISV
Sbjct: 158 EDRALLALQGPEAEQVLAAFAE-DVRKMMFMDVRTLDVDGARCVISRSGYTGEDGFEISV 216
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL +VKL GLGARDSL
Sbjct: 217 SAKDADRVARKLLEQPNVKLIGLGARDSL 245
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA II Q+++GVSR+R G G P+R ++ + +G ITSG P+
Sbjct: 284 AGGFPGADIILGQLENGVSRRRVGLRPEGRAPVRHDAPLYADAEFATHIGKITSGAFGPT 343
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ +++G ++ +R + V V+ +PFV +++
Sbjct: 344 VGGPVAMGYVASNDTQIGHTIFAELRGRSVPSIVSALPFVPAHF 387
>gi|83944369|ref|ZP_00956824.1| probable aminomethyltransferase (glycine cleavage system t protein)
[Sulfitobacter sp. EE-36]
gi|83844913|gb|EAP82795.1| probable aminomethyltransferase (glycine cleavage system t protein)
[Sulfitobacter sp. EE-36]
Length = 374
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 142/239 (59%), Gaps = 18/239 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPLYDLHL GGKMVPFAG+SMPVQY + + HLHTR+ VFDVSHM Q +VTG
Sbjct: 5 QQTPLYDLHLELGGKMVPFAGYSMPVQY-PMGVMKEHLHTRAAAGVFDVSHMGQVMVTGP 63
Query: 257 HREE---WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ E++ +V L+ G+ FTN+ GGI+DDL+ + +D LF+V NA+ +
Sbjct: 64 SWDAVALAFETLVPMNVLGLEDGRQRYGFFTNDAGGIEDDLMFARRGDD-LFVVVNAACK 122
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS--LYF 371
D+ M AA L +I + ++ +R L+AVQGP + + LD +S + F
Sbjct: 123 DADIARMKAA------LEPEITVTPIT--DRALVAVQGPAAGAAV---ASLDAASDKMRF 171
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M T+ G+ +R+GYTGEDG EISVP +V LL E V+ GLGARDSL
Sbjct: 172 MDFGTLTLDGVEVWASRSGYTGEDGFEISVPEAHAEALVRRLLEIEGVEPIGLGARDSL 230
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNA--NDQRVGAITSGCPSPS 74
GG+PGA +Q+ GV RKR G G P+R G +F+A +VG +TSG P+
Sbjct: 269 AGGYPGADAVQAAFDDGVGRKRVGLAPEGRAPMRDGTPLFDAATGGTQVGEVTSGSFGPT 328
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ A + + LW VR KR+ V V K+PFV +N+
Sbjct: 329 VGGPVAMGYVSEAQAGIDTMLWGEVRGKRLPVTVAKLPFVAANF 372
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
+R L+AVQGP + + LD +S + FM T+ G+ +R+GYTGEDG EIS
Sbjct: 144 DRALVAVQGPAAGAAV---ASLDAASDKMRFMDFGTLTLDGVEVWASRSGYTGEDGFEIS 200
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
VP +V LL E V+ GLGARDSL
Sbjct: 201 VPEAHAEALVRRLLEIEGVEPIGLGARDSL 230
>gi|417104041|ref|ZP_11961271.1| glycine cleavage system aminomethyltransferase T [Rhizobium etli
CNPAF512]
gi|327191046|gb|EGE58099.1| glycine cleavage system aminomethyltransferase T [Rhizobium etli
CNPAF512]
Length = 378
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 146/242 (60%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR++ VFDVSHM Q +V
Sbjct: 5 AALKKTPLHALHLSLGARMVPFAGYDMPVQYPA-GVMKEHLHTRTEAGVFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ GGI DDL++T L+D LF+V
Sbjct: 64 KAKSGSYEDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITH-LDDHLFIVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NAS ++ D+ + +G + L+ R LIA+QGP + +L D+++
Sbjct: 123 NASCKEADLAHLQ------THIGDQCDITLLN---RALIALQGPRAVEVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+P ++ + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPSDKAEDVTMRLLEHPDVQAIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 148 NRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 207 SDKAEDVTMRLLEHPDVQAIGLGARDSL 234
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPG+ I S++++G +R+R G G P+R ++ + R +G +TSG PS
Sbjct: 273 AGGFPGSGRILSELENGAARRRVGLKPEGKAPVRGHARLYADAEGRTEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +Y+ G +++ VR K + V V+ +PFV Y
Sbjct: 333 VEGPVAMGYVPVSYAAAGTQVYAEVRGKFLPVTVSALPFVTPTY 376
>gi|254464469|ref|ZP_05077880.1| glycine cleavage system T protein [Rhodobacterales bacterium Y4I]
gi|206685377|gb|EDZ45859.1| glycine cleavage system T protein [Rhodobacterales bacterium Y4I]
Length = 365
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 133/236 (56%), Gaps = 12/236 (5%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A +RTPLYDLH+ GGKMV FAG+ MPVQY + I H R K ++FDVSHM Q ++
Sbjct: 4 APKRTPLYDLHVELGGKMVDFAGWEMPVQY-PMGIMGEHKQCREKAALFDVSHMGQVILR 62
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G++ E LE++C L GK FTNE GGI DDLIV+ D F+V NA+ R
Sbjct: 63 GENVGEKLETLCPQAYAGLKEGKARYGFFTNEDGGIMDDLIVSNA-GDHYFVVVNAALRH 121
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
D+ M A D G ++ F +R L+AVQGP + ++ L FM +
Sbjct: 122 QDIPHMQANLD-----GVEVTEIF----DRALVAVQGPKAEDVVGGLCPA-ARDLKFMET 171
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R GYTGEDG EIS+P I + L+ +D + AGLGARDSL
Sbjct: 172 TVAEIDGAECRISRLGYTGEDGYEISIPESDAIRISKLFLAHDDCEPAGLGARDSL 227
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+E GGFPGA+ IQ ++ G S+K G G P R G E+ + +G ITSG
Sbjct: 257 KRRKEEGGFPGAARIQKELAEGPSKKLVGIKPEGRAPARQGVEVQSEGGDTLGTITSGSF 316
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ ++ G ++ + +R K ++ +PFV NY
Sbjct: 317 GPTVGGPVAMGYVAADHAAPGTKVNLIIRGKAQPAEIVALPFVTQNY 363
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+AVQGP + ++ L FM + I G C ++R GYTGEDG EIS+P
Sbjct: 141 DRALVAVQGPKAEDVVGGLCPA-ARDLKFMETTVAEIDGAECRISRLGYTGEDGYEISIP 199
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
I + L+ +D + AGLGARDSL
Sbjct: 200 ESDAIRISKLFLAHDDCEPAGLGARDSL 227
>gi|86136993|ref|ZP_01055571.1| glycine cleavage system T protein [Roseobacter sp. MED193]
gi|85826317|gb|EAQ46514.1| glycine cleavage system T protein [Roseobacter sp. MED193]
Length = 365
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 131/239 (54%), Gaps = 18/239 (7%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A +RTPLYDLH+ GGKMV FAG+ MPVQY + I H R K +FDVSHM Q ++
Sbjct: 4 APKRTPLYDLHVELGGKMVDFAGWEMPVQY-PLGIMGEHKQCREKAGLFDVSHMGQVILR 62
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G + LE + + L GK + FTN+ GGI DDLIV+ D F+V NAS R
Sbjct: 63 GANVAAQLEKLAPSSFTNLKEGKARYTFFTNDNGGIMDDLIVSNA-GDHFFVVVNASMRH 121
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEE---RGLIAVQGPLSSTILQRHTDLDLSSLYF 371
D+ M + HL+ + E R L+AVQGP + ++ + F
Sbjct: 122 QDIPHM------------EKHLEGVEVTEIFDRALVAVQGPSAENVVGALCPA-ACDMTF 168
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + I G+ C L+R GYTGEDG EIS+P ++ I A L+ D + AGLGARDSL
Sbjct: 169 METIVADINGVSCRLSRLGYTGEDGYEISIPEDRAVEITRAFLAHPDCEPAGLGARDSL 227
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPGA+ IQ ++ G RK G G P R G E+ +A +G+ITSG
Sbjct: 257 KRRREEGGFPGAARIQKELTEGAGRKLVGIKPLGRAPARQGVEVHSAEGSPIGSITSGGF 316
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ + ++ + +R K ++ +PFV NY
Sbjct: 317 GPTVGGPVAMGYVAAGHGAPDEQVSLIIRGKAQPAEIVALPFVTQNY 363
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+AVQGP + ++ + FM + I G+ C L+R GYTGEDG EIS+P
Sbjct: 141 DRALVAVQGPSAENVVGALCPA-ACDMTFMETIVADINGVSCRLSRLGYTGEDGYEISIP 199
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ I A L+ D + AGLGARDSL
Sbjct: 200 EDRAVEITRAFLAHPDCEPAGLGARDSL 227
>gi|422403547|ref|ZP_16480604.1| glycine cleavage system T protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330874302|gb|EGH08451.1| glycine cleavage system T protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 320
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 26 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGTDA 84
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTN+ GGI DDL+V D L LV NA+ + D+
Sbjct: 85 AKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGNDQLMLVVNAACKNQDL- 143
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A R K L ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 144 ----AHLR-KHLAGHCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVK 196
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 197 LLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 248
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + + C ++R+GYTGEDG EISV
Sbjct: 161 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVKLLDVQCYVSRSGYTGEDGYEISV 219
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 220 PAEQAEALARRLLEEPEVAPIGLGARDSL 248
>gi|396463310|ref|XP_003836266.1| similar to aminomethyltransferase [Leptosphaeria maculans JN3]
gi|312212818|emb|CBX92901.1| similar to aminomethyltransferase [Leptosphaeria maculans JN3]
Length = 464
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 141/250 (56%), Gaps = 10/250 (4%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
G RT LYDLH +G K VPF G+ MPVQY +SI SH TR K S+FDV HM+
Sbjct: 67 GEKQQGPSRTGLYDLHSKYGAKFVPFGGYDMPVQYSDLSIIDSHNWTREKASLFDVGHMV 126
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFLVS 308
Q +G E +LESI + + L + TLS L GGI DD +VT+ L ++V+
Sbjct: 127 QHHFSGPGAEAFLESITPSSLSTLPERQSTLSTLLHPGTGGIVDDTVVTR-LPGKFYVVT 185
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR----HTDL 364
NA R+ D + +KS D + + + +GLIA+QGPLS+ IL R +
Sbjct: 186 NAGCREKDTAYFKEQLEAWKSAHPDQPVDWKILDGQGLIALQGPLSAEILARVLEEKSKA 245
Query: 365 DLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVK 420
DL SLYF P TI G ++R GYTGEDG EIS+P I + LL S ++++
Sbjct: 246 DLKSLYFGQCSPATIKGTDAEVLVSRGGYTGEDGFEISIPPYATEAITQFLLDSSKDELR 305
Query: 421 LAGLGARDSL 430
LAGLGARD+L
Sbjct: 306 LAGLGARDTL 315
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 12 GKRRRETGGFPGASIIQSQIK-----SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
GK RRE GGF G S+I Q+K GVSR+R G G P R G +I N + +G+I
Sbjct: 344 GKDRREKGGFHGDSVILRQLKKKSEGGGVSRRRIGLIIDGAPAREGAKIVNDAGEEIGSI 403
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
TSGCPSP+LKKNI+MGYI+ K G E+ V VR K+ VT+MPF+ S Y+ P
Sbjct: 404 TSGCPSPTLKKNISMGYIKDGMHKAGTEVQVLVRGKKRKAVVTRMPFIPSKYFKQP 459
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR----HTDLDLSSLYFMTSRPCTIA 505
+ +KS D + + + +GLIA+QGPLS+ IL R + DL SLYF P TI
Sbjct: 202 EAWKSAHPDQPVDWKILDGQGLIALQGPLSAEILARVLEEKSKADLKSLYFGQCSPATIK 261
Query: 506 GIPCTL--TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
G + +R GYTGEDG EIS+P I + LL S ++++LAGLGARD+L
Sbjct: 262 GTDAEVLVSRGGYTGEDGFEISIPPYATEAITQFLLDSSKDELRLAGLGARDTL 315
>gi|407788205|ref|ZP_11135339.1| glycine cleavage system aminomethyltransferase T [Celeribacter
baekdonensis B30]
gi|407197948|gb|EKE67994.1| glycine cleavage system aminomethyltransferase T [Celeribacter
baekdonensis B30]
Length = 378
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 140/238 (58%), Gaps = 15/238 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD H+ GGKMVPFAG+ MPVQY + + HLHTR++ +FDVSHM Q ++T
Sbjct: 8 KRTPLYDFHVEQGGKMVPFAGYDMPVQY-PLGVMKEHLHTRAEAGLFDVSHMGQVMLTSP 66
Query: 257 HREEWL----ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
E L E++ DV + PG+ +FTN+ GGI DDL+++ T D+LFLV NA+
Sbjct: 67 EGIEALGLALETLAPVDVLAVKPGRQRYGVFTNDAGGILDDLMISNT-GDALFLVVNAAC 125
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
++ D+ ++ H+ R L+A+QGP + +L + ++ + FM
Sbjct: 126 KQQDIAHLITHLPG--------HVTVTEITNRALLALQGPKAEAVLAQIVP-QVAEMRFM 176
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G ++R+GYTGEDG EISVP + + L++ + V+L GLGARDSL
Sbjct: 177 DSLRIAVGGSEWWISRSGYTGEDGFEISVPAGEAVDFAKTLVAMDAVELIGLGARDSL 234
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQ--RVGAITSGCPSPS 74
GGFPGA I S++ +G RKR G G P+R G +F ++ ++G ITSG PS
Sbjct: 273 AGGFPGADRILSELHNGAERKRVGLLPQGRAPMREGTPLFATSESADQIGVITSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+++ IAMGY+ ++K+G E++ +R KR+ V V MPF S Y
Sbjct: 333 VERPIAMGYLPAEFTKIGTEIYAELRGKRLPVTVADMPFRPSTY 376
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 460 HLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGE 519
H+ R L+A+QGP + +L + ++ + FM S + G ++R+GYTGE
Sbjct: 140 HVTVTEITNRALLALQGPKAEAVLAQIVP-QVAEMRFMDSLRIAVGGSEWWISRSGYTGE 198
Query: 520 DGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
DG EISVP + + L++ + V+L GLGARDSL
Sbjct: 199 DGFEISVPAGEAVDFAKTLVAMDAVELIGLGARDSL 234
>gi|296536598|ref|ZP_06898677.1| aminomethyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296263076|gb|EFH09622.1| aminomethyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 367
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 138/232 (59%), Gaps = 10/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH GGKMVPFAG++MPVQY A I A HL TR+ ++FDVSHM Q + G+
Sbjct: 8 TPLASLHRELGGKMVPFAGYAMPVQYPA-GIMAEHLATRAGAALFDVSHMGQAELLGEGA 66
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ AD+ L PG+ L N +GGI DD +V D LFLV NASR+ VD+
Sbjct: 67 AAALEALTPADIRILKPGRQKYGLLLNPEGGIVDDFMVANLGGDRLFLVVNASRKAVDLP 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
L+ AA L + L L +R L+A QGP + +L +++L FM
Sbjct: 127 LIEAA------LPAGVRLTPLP--DRALLAFQGPQAVPLLAGLAP-AVAALPFMGVAETE 177
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GIP ++R+GYTGEDGVEISVP E+ + + LLS V AGLGARDSL
Sbjct: 178 IDGIPVLVSRSGYTGEDGVEISVPAERAEALAKRLLSLPGVVPAGLGARDSL 229
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A QGP + +L +++L FM I GIP ++R+GYTGEDGVEISVP
Sbjct: 143 DRALLAFQGPQAVPLLAGLAP-AVAALPFMGVAETEIDGIPVLVSRSGYTGEDGVEISVP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E+ + + LLS V AGLGARDSL
Sbjct: 202 AERAEALAKRLLSLPGVVPAGLGARDSL 229
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGC 70
GKRRR FPGA ++++++G SR R G G P R I +G ITSG
Sbjct: 258 GKRRRMEWNFPGAERTRAELENGPSRLRVGILPEGRQPARAHTAIHAPGGAAMGEITSGT 317
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PSL AMGY+ ++ G L ++VR K + +V PFV Y
Sbjct: 318 FGPSLNGPCAMGYVARGHAADGTALELQVRGKALPARVAATPFVPHRY 365
>gi|319763032|ref|YP_004126969.1| glycine cleavage system t protein [Alicycliphilus denitrificans BC]
gi|317117593|gb|ADV00082.1| glycine cleavage system T protein [Alicycliphilus denitrificans BC]
Length = 377
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 146/275 (53%), Gaps = 19/275 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S A TPL LHL G +MVPFAG+SMPVQY + A HLHTR K +FDVSHM Q
Sbjct: 3 ASADALLTTPLNALHLELGARMVPFAGYSMPVQY-PTGLMAEHLHTREKAGLFDVSHMGQ 61
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ G LES+ DV L GK L N++GGI DDL+ +D+LFL+ N
Sbjct: 62 LKLVGPAAAAALESLMPVDVIGLPVGKQRYGLLLNDEGGIIDDLMFFNQGDDTLFLIVNG 121
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ + D+ + A +G+ Q ++ ++GL+A+QGP ++ L+R S L
Sbjct: 122 ACKAGDIAHIQA------RIGQ--RCQVVTMPDQGLLALQGPQAAAALERLVP-GASQLV 172
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM+ G +TR+GYTGEDG EISVPG Q ALL+ +VK GLGAR+SL
Sbjct: 173 FMSGGGFDWNGASLFITRSGYTGEDGFEISVPGAQAEQFARALLAQPEVKPIGLGARNSL 232
Query: 431 ---------SGDITLNTPVPHGSLKLSNDRFKSLG 456
DI T P +L + + + G
Sbjct: 233 RLEAGLCLYGNDIDATTTPPEAALNWAIQKVRRTG 267
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIK--SGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +QI + ++RKR G + VP+R + N + Q +G +TSG SPS
Sbjct: 271 AGGFPGADKVLAQIDDPASLARKRVGLIAKERVPVREPATLENLDGQHIGQVTSGLLSPS 330
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
L + IA+ Y++P Y++ G EL+ VR K V + V PF+ Y+
Sbjct: 331 LNQPIALAYVQPDYAEAGTELFAMVRGKPVPMVVASTPFLPPRYH 375
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
Q ++ ++GL+A+QGP ++ L+R S L FM+ G +TR+GYTGEDG
Sbjct: 140 QVVTMPDQGLLALQGPQAAAALERLVP-GASQLVFMSGGGFDWNGASLFITRSGYTGEDG 198
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVPG Q ALL+ +VK GLGAR+SL
Sbjct: 199 FEISVPGAQAEQFARALLAQPEVKPIGLGARNSL 232
>gi|422606873|ref|ZP_16678879.1| glycine cleavage system T protein, partial [Pseudomonas syringae
pv. mori str. 301020]
gi|330890521|gb|EGH23182.1| glycine cleavage system T protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 336
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 26 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGTDA 84
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTN+ GGI DDL+V D L LV NA+ + D+
Sbjct: 85 AKALEALVPVDIIDLPVGMQRYAMFTNDAGGILDDLMVANLGSDQLMLVVNAACKNQDL- 143
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A R K L ++ L EER L+A+QGP + T+L R +++ + FM
Sbjct: 144 ----AHLR-KHLAGHCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVK 196
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EISVP EQ + LL + +V GLGARDSL
Sbjct: 197 LLDVQCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSL 248
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + + C ++R+GYTGEDG EISV
Sbjct: 161 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVKLLDVQCYVSRSGYTGEDGYEISV 219
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + LL + +V GLGARDSL
Sbjct: 220 PAEQAEALARRLLEEPEVAPIGLGARDSL 248
>gi|357383577|ref|YP_004898301.1| glycine cleavage system protein T [Pelagibacterium halotolerans B2]
gi|351592214|gb|AEQ50551.1| aminomethyltransferase (glycine cleavage system T protein)
[Pelagibacterium halotolerans B2]
Length = 381
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 146/241 (60%), Gaps = 19/241 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG-- 255
+T LYD H+ GG+MV F G+++PVQY I A H HTR S+FDVSHM Q VVTG
Sbjct: 11 KTALYDRHVDAGGRMVEFGGYALPVQY--AGIVAEHNHTREAASLFDVSHMGQVVVTGPD 68
Query: 256 -KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS-----LFLVSN 309
K LE++ AD+ L+PG+ ++ N++GGI+DDLI+T+ ++ +++V N
Sbjct: 69 HKTTIAALEALTPADLASLEPGQMRYTVLLNDEGGIEDDLIITRPAKEQEPDGVMYMVVN 128
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A+R+ D+ + R K+ + + F ++ LIA+QGP ++ L +H ++ L
Sbjct: 129 AARKHHDLQFI-----RAKATAE---VTFDLRDDLALIALQGPRAAEALGKHCEI-TEKL 179
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FM + P I GI ++R+GYTGEDG E+SV + + + L++D V+ AGLGARDS
Sbjct: 180 GFMQAGPTVIGGIAANVSRSGYTGEDGFELSVANKDAPALFDLLVADPLVEPAGLGARDS 239
Query: 430 L 430
L
Sbjct: 240 L 240
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQ 61
+ + LL GKRRR GGF GA + +++ SG KR G G P+R G E+ +A
Sbjct: 260 VSASLLFAIGKRRRAEGGFTGADAVLARVASGPDDKRVGIRFEGRQPVREGAELVDAGGT 319
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+G ITSG +P+ + +IAMGY+ +K G + VR K + + KMPFV YY
Sbjct: 320 VIGKITSGTFAPTAQASIAMGYVPAEIAKEGEPVTAMVRGKPIAGTIAKMPFVPQRYYRK 379
Query: 122 P 122
P
Sbjct: 380 P 380
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++ LIA+QGP ++ L +H ++ L FM + P I GI ++R+GYTGEDG E+SV
Sbjct: 153 DDLALIALQGPRAAEALGKHCEI-TEKLGFMQAGPTVIGGIAANVSRSGYTGEDGFELSV 211
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + + L++D V+ AGLGARDSL
Sbjct: 212 ANKDAPALFDLLVADPLVEPAGLGARDSL 240
>gi|229260087|ref|YP_469748.2| glycine cleavage system aminomethyltransferase T [Rhizobium etli
CFN 42]
Length = 378
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 144/242 (59%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHL G +MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V
Sbjct: 5 AALKKTPLHALHLQLGARMVPFAGYDMPVQYPA-GVMKEHLHTRTEAGLFDVSHMGQVIV 63
Query: 254 TGK--HREEW---LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
K H E+ LES+ D+ L G+ FT++ GGI DDL++T L+D LF+V
Sbjct: 64 KAKSGHYEDAALALESLVPVDILGLAEGRQRYGFFTDDTGGILDDLMITH-LDDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NAS + D+ + A + + L+ R LIA+QGP + +L D+++
Sbjct: 123 NASCKDADLAHLRA------HISDQCDITLLN---RALIALQGPRAVEVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EISVP ++ + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVPADKAEDVAMRLLEHPDVQAIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EISVP
Sbjct: 148 NRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 207 ADKAEDVAMRLLEHPDVQAIGLGARDSL 234
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQ-RVGAITSGCPSPSLKK 77
FPG+ I S++++G +R+R G G P+R ++ +A Q +G +TSG PS+
Sbjct: 276 FPGSGRILSELENGAARRRVGLKPEGKAPVRGHARLYADAEGQTEIGEVTSGGFGPSVDG 335
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ +++ G ++ VR K + V ++ +PF+ Y
Sbjct: 336 PVAMGYVPVSHAAPGTLIYAEVRGKYLPVTISALPFITPTY 376
>gi|119385078|ref|YP_916134.1| glycine cleavage system T protein [Paracoccus denitrificans PD1222]
gi|119374845|gb|ABL70438.1| glycine cleavage system T protein [Paracoccus denitrificans PD1222]
Length = 370
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 136/242 (56%), Gaps = 27/242 (11%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYDLHL+ G KMVPFAG+ MPVQY + + HLHTRS +FDVSHM Q ++ G
Sbjct: 5 RRTTLYDLHLARGAKMVPFAGWEMPVQY-PMGVLNEHLHTRSHAGLFDVSHMGQVILRGP 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E LE + AD+ L G+ LFTN +GGI DDL++ D L LV NA+ + D
Sbjct: 64 GAAEALEGLVPADITGLAEGRQRYGLFTNAEGGILDDLMIANK-GDHLLLVVNAACAEQD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAE--------ERGLIAVQGPLSSTILQRHTDLDLSS 368
+ HL+ L A+ +RGL+A+QGP + +L R +
Sbjct: 123 I----------------AHLRQLEAQGILVEPVTDRGLLALQGPEAEAVLARLVP-GAQA 165
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM G+ ++R+GYTGEDG EISVP ++ EALL++ +V GLGARD
Sbjct: 166 MKFMDVAEFDWQGVTLWVSRSGYTGEDGFEISVPEDRVVAFAEALLAEPEVAPIGLGARD 225
Query: 429 SL 430
SL
Sbjct: 226 SL 227
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPSL 75
GGFPGA +I ++ +G +R R G G PIR G IF+A + +G + SG PS+
Sbjct: 267 GGFPGADVILDELAAGPARSRMGLRPEGRAPIREGVGIFDAAEGGAGLGKVCSGGFGPSV 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AM + PA G LW +R KR+ V +T +PF K +Y
Sbjct: 327 GGPVAMAVL-PAGLAPGATLWAELRGKRIPVTITPLPFHKPSY 368
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+RGL+A+QGP + +L R ++ FM G+ ++R+GYTGEDG EISVP
Sbjct: 141 DRGLLALQGPEAEAVLARLVP-GAQAMKFMDVAEFDWQGVTLWVSRSGYTGEDGFEISVP 199
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ EALL++ +V GLGARDSL
Sbjct: 200 EDRVVAFAEALLAEPEVAPIGLGARDSL 227
>gi|424887745|ref|ZP_18311348.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393173294|gb|EJC73338.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 378
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 146/242 (60%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V
Sbjct: 5 AALKKTPLHGLHLSLGARMVPFAGYDMPVQYPA-GVMKEHLHTRTEAGIFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ G I DDL++T L+D LF+V
Sbjct: 64 KAKSGSYEDAALALESLVPVDILGLAEGRQRYGFFTDDSGCILDDLMITH-LDDHLFIVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NAS ++ D+ + A +G + L +R LIA+QGP + +L D+++
Sbjct: 123 NASCKEADLAHLQA------HIGDQCDITLL---DRALIALQGPRAVEVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+P ++ + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPADKAVDVTMRLLEHPDVQTIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 148 DRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 207 ADKAVDVTMRLLEHPDVQTIGLGARDSL 234
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPG+ I S++++G R+R G G P+R +++ + + +G +TSG PS
Sbjct: 273 AGGFPGSGRILSELENGAVRRRVGLKPEGKAPVRGHAKLYADAEGKAEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G ++ VR K + V V+ +PFV Y
Sbjct: 333 VEGPVAMGYVPVSHAAAGTLVYAEVRGKYLPVTVSALPFVTPTY 376
>gi|399036573|ref|ZP_10733607.1| glycine cleavage system T protein [Rhizobium sp. CF122]
gi|398065901|gb|EJL57513.1| glycine cleavage system T protein [Rhizobium sp. CF122]
Length = 402
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 145/242 (59%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + H+ TR+ VFDVSHM Q V+
Sbjct: 29 AALKKTPLHALHLSLGARMVPFAGYDMPVQYPA-GVMKEHIQTRTSAGVFDVSHMGQVVI 87
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+GK+ + L ES+ D+ L G+ FT+ GGI DDL++T L+D LF+V
Sbjct: 88 KAKSGKYEDAALALESLVPVDILGLAEGRQRYGFFTDGNGGILDDLMITH-LDDHLFVVV 146
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D+ + K +G + L +R LIA+QGP + +L D+++
Sbjct: 147 NAACKDADLAHLQ------KHIGDTCDITLL---DRALIALQGPRAVEVLAELW-ADVAA 196
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+PG++ + + LL DV GLGARD
Sbjct: 197 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPGDKAEDVTKRLLEHPDVAPIGLGARD 256
Query: 429 SL 430
SL
Sbjct: 257 SL 258
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 172 DRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 230
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
G++ + + LL DV GLGARDSL
Sbjct: 231 GDKAEDVTKRLLEHPDVAPIGLGARDSL 258
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA I ++++ G +R+R G G P+R ++F + + +G +TSG PS
Sbjct: 297 AGGFPGADRILAELEKGAARRRVGLKPEGKAPVRGHAKLFADAEGKTEIGEVTSGGFGPS 356
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ A + VG +++ VR K + V V+ +PF+ Y
Sbjct: 357 VEHPVAMGYVTVAQAAVGTQVYAEVRGKYLPVIVSALPFITPTY 400
>gi|340992766|gb|EGS23321.1| hypothetical protein CTHT_0009890 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 481
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 143/251 (56%), Gaps = 17/251 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+T LYDLHL +G KMVPF GF MPVQY ++S+ SHL TRS S+FDV HM+Q + +G
Sbjct: 83 QKTALYDLHLRYGAKMVPFGGFHMPVQYSSLSVIQSHLFTRSHASLFDVGHMVQRLFSGP 142
Query: 257 HREEWLESICVADVHELDPGKGTLS--LFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
++LE I + L + TLS + + GGI DD IVTK D ++V+NA+ R
Sbjct: 143 GAAQFLERITPSAASALGEHRSTLSCIMHADGSGGIVDDTIVTKLTADKFYVVTNAACRD 202
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAE--ERGLIAVQGPLSSTILQ--RHTDLDLSSLY 370
D + + ++ + LQ + E GLIA+QGP ++ IL D +L L
Sbjct: 203 KDNEYLRKEMAKWNAEPGHESLQVKEEQLSESGLIALQGPEAAPILSLLLPKDFNLRGLL 262
Query: 371 FMTSR--PCTIAG-----IPCTLTRAGYTGEDGVEISVPG-EQCTHIVEALLSD---EDV 419
F S P + G P ++R GYTGEDG EIS+P + I EA+LS E V
Sbjct: 263 FGHSAYTPLMLPGSNTQTSPVLISRGGYTGEDGFEISIPSPAETVTITEAILSAGGPEKV 322
Query: 420 KLAGLGARDSL 430
+LAGLGARDSL
Sbjct: 323 QLAGLGARDSL 333
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 9 IFPGKRRRETGGFPGASIIQSQI------KSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I P +RR G+ GA I Q+ GV R+R G G P R GY I A ++
Sbjct: 360 IIPKERRGPDAGYYGAEKIAKQLVPKAKGGEGVERRRVGLIVEGAPAREGYPIVTAEGEK 419
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSGCPSPSL KNIAMGYI+ KVG E+ V VR K V+KMPFV + Y+
Sbjct: 420 VGVVTSGCPSPSLGKNIAMGYIKEGLHKVGTEVQVVVRGKPKKAVVSKMPFVPNKYW 476
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 13/101 (12%)
Query: 468 ERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSR--PCTIAGI-----PCTLTRAGYTG 518
E GLIA+QGP ++ IL D +L L F S P + G P ++R GYTG
Sbjct: 233 ESGLIALQGPEAAPILSLLLPKDFNLRGLLFGHSAYTPLMLPGSNTQTSPVLISRGGYTG 292
Query: 519 EDGVEISVPG-EQCTHIVEALLSD---EDVKLAGLGARDSL 555
EDG EIS+P + I EA+LS E V+LAGLGARDSL
Sbjct: 293 EDGFEISIPSPAETVTITEAILSAGGPEKVQLAGLGARDSL 333
>gi|68473519|ref|XP_719084.1| hypothetical protein CaO19.5519 [Candida albicans SC5314]
gi|46440885|gb|EAL00186.1| hypothetical protein CaO19.5519 [Candida albicans SC5314]
Length = 394
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 144/250 (57%), Gaps = 17/250 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS S +TPL++ H+ GGKMVP+AGF MPV Y S SH RSKV +FDVSHMLQ
Sbjct: 11 SSTSNLLKTPLHEAHIELGGKMVPYAGFEMPVLYKGQSHIESHNWVRSKVGLFDVSHMLQ 70
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
++GK + L+ I D+ +L +LS+ N GG+ DD I+TK ED ++V+NA
Sbjct: 71 HNISGKDAQSLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDEYYMVTNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R+ D+ + +F S+ H F E L+A+QGP + ILQ+ T+ DLS +Y
Sbjct: 131 GCREKDVKFIKDEASQFNSVN---HNTF----EGTLLAIQGPKAQEILQQFTNEDLSKIY 183
Query: 371 FMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVP------GEQCTHIVEALLSD--EDVK 420
F ++ ++ I T L R+GYTGEDG E+S+P +Q L+++ + VK
Sbjct: 184 FGQTKFLKLSPIGATVYLARSGYTGEDGFELSIPSTTPEESKQALDFFYTLINEYPDVVK 243
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 244 PIGLAARDSL 253
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK--SGVSRKRTGFTSTGVPIRPGYEIFNANDQRV-GA 65
+ P RR E F GAS I SQIK S + +R G TS G R G +IFN + V G
Sbjct: 280 LIPKTRRDENNDFNGASKILSQIKDKSSFTHRRIGLTSKGPSPRDGNKIFNEDGTVVIGY 339
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+TSG PSP+L NIA YI + G + + +R+K D +TK+PFV S Y P
Sbjct: 340 VTSGSPSPTLGGNIAQAYIAKXHXX-GSNVKIEIRNKLRDAVITKLPFVPSILYNP 394
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 48/218 (22%)
Query: 349 VQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTH 408
+ G + ++LQ+ T +DLS L P + + L G +D + I+ GE +
Sbjct: 73 ISGKDAQSLLQKITPIDLSKL------PVNTSSLSVLLNNNGGVIDDCI-ITKHGEDEYY 125
Query: 409 IV-EALLSDEDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPE 467
+V A ++DVK +K +F S+ H F
Sbjct: 126 MVTNAGCREKDVKF-----------------------IKDEASQFNSVN---HNTF---- 155
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEIS 525
E L+A+QGP + ILQ+ T+ DLS +YF ++ ++ I T L R+GYTGEDG E+S
Sbjct: 156 EGTLLAIQGPKAQEILQQFTNEDLSKIYFGQTKFLKLSPIGATVYLARSGYTGEDGFELS 215
Query: 526 VP------GEQCTHIVEALLSD--EDVKLAGLGARDSL 555
+P +Q L+++ + VK GL ARDSL
Sbjct: 216 IPSTTPEESKQALDFFYTLINEYPDVVKPIGLAARDSL 253
>gi|68473286|ref|XP_719201.1| hypothetical protein CaO19.12965 [Candida albicans SC5314]
gi|46441008|gb|EAL00308.1| hypothetical protein CaO19.12965 [Candida albicans SC5314]
gi|238883115|gb|EEQ46753.1| hypothetical protein CAWG_05118 [Candida albicans WO-1]
Length = 394
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 144/250 (57%), Gaps = 17/250 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS S +TPL++ H+ GGKMVP+AGF MPV Y S SH RSKV +FDVSHMLQ
Sbjct: 11 SSTSNLLKTPLHEAHIELGGKMVPYAGFEMPVLYKGQSHIESHNWVRSKVGLFDVSHMLQ 70
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
++GK + L+ I D+ +L +LS+ N GG+ DD I+TK ED ++V+NA
Sbjct: 71 HNISGKDAQNLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDEYYMVTNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R+ D+ + +F S+ H F E L+A+QGP + ILQ+ T+ DLS +Y
Sbjct: 131 GCREKDVKFIKDEASQFNSVN---HNTF----EGTLLAIQGPKAQEILQQFTNEDLSKIY 183
Query: 371 FMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVP------GEQCTHIVEALLSD--EDVK 420
F ++ ++ I T L R+GYTGEDG E+S+P +Q L+++ + VK
Sbjct: 184 FGQTKFLKLSPIGATVHLARSGYTGEDGFELSIPSTTPEESKQALDFFYTLINEYPDVVK 243
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 244 PIGLAARDSL 253
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK--SGVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGA 65
+ P RR E F GAS I SQIK S + +R G TS G R G +IFN + +G
Sbjct: 280 LIPKTRRDENNDFNGASKILSQIKDKSSFTHRRIGLTSKGPSPRDGNKIFNEDGTVEIGY 339
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+TSG PSP+L NIA YI+ + K+G + + +R+K D +TK+PFV SN Y P
Sbjct: 340 VTSGSPSPTLGGNIAQAYIDKKH-KIGSNVKIEIRNKLRDAVITKLPFVPSNLYKP 394
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 48/218 (22%)
Query: 349 VQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTH 408
+ G + +LQ+ T +DLS L P + + L G +D + I+ GE +
Sbjct: 73 ISGKDAQNLLQKITPIDLSKL------PVNTSSLSVLLNNNGGVIDDCI-ITKHGEDEYY 125
Query: 409 IV-EALLSDEDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPE 467
+V A ++DVK +K +F S+ H F
Sbjct: 126 MVTNAGCREKDVKF-----------------------IKDEASQFNSVN---HNTF---- 155
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEIS 525
E L+A+QGP + ILQ+ T+ DLS +YF ++ ++ I T L R+GYTGEDG E+S
Sbjct: 156 EGTLLAIQGPKAQEILQQFTNEDLSKIYFGQTKFLKLSPIGATVHLARSGYTGEDGFELS 215
Query: 526 VP------GEQCTHIVEALLSD--EDVKLAGLGARDSL 555
+P +Q L+++ + VK GL ARDSL
Sbjct: 216 IPSTTPEESKQALDFFYTLINEYPDVVKPIGLAARDSL 253
>gi|444322199|ref|XP_004181755.1| hypothetical protein TBLA_0G02990 [Tetrapisispora blattae CBS 6284]
gi|387514800|emb|CCH62236.1| hypothetical protein TBLA_0G02990 [Tetrapisispora blattae CBS 6284]
Length = 397
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 140/237 (59%), Gaps = 8/237 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+DLH+ GG MVP+AG+SMPV Y + SH TR+ +FDVSHM+Q+ +TGK
Sbjct: 20 KKTALHDLHVELGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMMQSRLTGK 79
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ +L + D L +GTLS+ N GGI DD ++TK E+S ++V+NA K D
Sbjct: 80 NAVSFLHKVTPTDFESLKADQGTLSVLLNNTGGIVDDTMITKEKENSFYVVTNAGCIKRD 139
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTS 374
+ ++ K +G+D++ + + +++ L+A+QGP +S + ++ LYF +
Sbjct: 140 TEFLLG---ELKQIGEDVNWEVI--KDKSLLALQGPKASQVFEKLLKEGQTTKDLYFGSR 194
Query: 375 RPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
R + G + R+GYTGEDG EISVP ++ + LL + + K GL ARDSL
Sbjct: 195 RSFQLYDGTTIDVARSGYTGEDGFEISVPNDKAENFARLLLDNSETKPIGLAARDSL 251
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTIA-GIP 508
K +G+D++ + + +++ L+A+QGP +S + ++ LYF + R + G
Sbjct: 147 LKQIGEDVNWEVI--KDKSLLALQGPKASQVFEKLLKEGQTTKDLYFGSRRSFQLYDGTT 204
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R+GYTGEDG EISVP ++ + LL + + K GL ARDSL
Sbjct: 205 IDVARSGYTGEDGFEISVPNDKAENFARLLLDNSETKPIGLAARDSL 251
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKS-GVSRKRTGFT--STGVPIRPGYEIFNAN-DQRV 63
LI +R E G F G I Q+ + +R R F G RP +IF + +++
Sbjct: 278 LISKSRRAGEKGKFNGFDNIMDQLNNKNYTRTRIAFKYLGKGPAARPDAKIFTTDKSKQI 337
Query: 64 GAITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPF 113
G +TSG SPSL NI GY++ A+ K G EL V VR+K + + KMP
Sbjct: 338 GIVTSGSASPSLGNINIGQGYVDKAFRKSGTELLVEVRNKMFPIVLEKMPL 388
>gi|219114339|ref|XP_002176340.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP
1055/1]
gi|217402586|gb|EEC42576.1| glycine decarboxylase t-protein [Phaeodactylum tricornutum CCAP
1055/1]
Length = 421
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 145/253 (57%), Gaps = 16/253 (6%)
Query: 189 PGSSPSAEQ----RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVS--ITASHLHTRS--KV 240
P S +AE +T LY++H GG MVPFAG+ +PV Y + + HL R+ K
Sbjct: 28 PSRSFAAESENLVKTALYNVHKDLGGDMVPFAGYELPVLYKGENGGVMKEHLWCRADGKA 87
Query: 241 SVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTL 300
S+FDVSHM Q GK R +LE + V D+ L G G LSL TNE+GGI DD ++T
Sbjct: 88 SLFDVSHMGQIRWHGKDRVAFLERVVVGDIASLKEGMGCLSLVTNEKGGIIDDTVITNA- 146
Query: 301 EDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR 360
D +F+V N + + DM +++ D+ +++L + L+AVQGP ++ + +
Sbjct: 147 GDHVFMVVNGATKFGDMKHF---EEQMAVFDGDVTMEYLE-DSMQLLAVQGPGAAASVAK 202
Query: 361 --HTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE 417
+D D++ + FM+ RP T+ G+ C +TR GYTGEDG EI++P E I L+ D
Sbjct: 203 LLPSDFDMTRMPFMSGRPTTLDGVDGCRITRCGYTGEDGFEIAMPTEHAVSIASKLMEDS 262
Query: 418 DVKLAGLGARDSL 430
V GLGARDSL
Sbjct: 263 SVNPTGLGARDSL 275
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 5/114 (4%)
Query: 14 RRRETGGFPGASII---QSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAN-DQRVGAITSG 69
RRR GGF GA I +++ V+RKR G P R EIF+ N + ++G +TSG
Sbjct: 309 RRRTEGGFLGAEHILTPDGKLQK-VNRKRVGIMGMKAPARDHTEIFDENGENKIGEVTSG 367
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SP LK IAMGY+E A +K G + +++R+K ++TKMPFV+S YY P+
Sbjct: 368 TFSPCLKAPIAMGYVETASAKAGTPIMLKIRNKMQKAEITKMPFVESRYYRVPE 421
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 434 ITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDL 491
+ +N G +K ++ D+ +++L + L+AVQGP ++ + + +D D+
Sbjct: 152 MVVNGATKFGDMKHFEEQMAVFDGDVTMEYLE-DSMQLLAVQGPGAAASVAKLLPSDFDM 210
Query: 492 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 550
+ + FM+ RP T+ G+ C +TR GYTGEDG EI++P E I L+ D V GLG
Sbjct: 211 TRMPFMSGRPTTLDGVDGCRITRCGYTGEDGFEIAMPTEHAVSIASKLMEDSSVNPTGLG 270
Query: 551 ARDSL 555
ARDSL
Sbjct: 271 ARDSL 275
>gi|354543048|emb|CCE39766.1| hypothetical protein CPAR2_601860 [Candida parapsilosis]
gi|354543056|emb|CCE39774.1| hypothetical protein CPAR2_601930 [Candida parapsilosis]
Length = 397
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 143/243 (58%), Gaps = 17/243 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLY+ H+ GGKMVP+AGF MPV Y + S SH RSK +FDVSHMLQ ++G
Sbjct: 21 KTPLYEAHVKLGGKMVPYAGFEMPVLYESQSHIDSHNWVRSKAGLFDVSHMLQHNISGSD 80
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ +LE + D++ + +LS+ N++GG+ DD I+TK +D ++V+NA R+ D+
Sbjct: 81 AQSFLEKVTPIDLNLIPENSSSLSVLLNQEGGVIDDCIITKHEKDKYYMVTNAGCREKDV 140
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ +D K+ H F E L+A+QGP + +LQ+ T+ DLS +YF ++
Sbjct: 141 QFL---KDELKAFDDVQHNTF----EGTLLAIQGPKAQELLQKFTNEDLSKIYFGQTKFI 193
Query: 378 TIAGIPCT--LTRAGYTGEDGVEISVPGEQCTHIVEAL-----LSDE--DV-KLAGLGAR 427
+A I T L R+GYTGEDG E+S+P EAL L +E DV K GL AR
Sbjct: 194 KLAPISATVHLARSGYTGEDGFELSIPSATPDEAAEALGFFNTLVNEYPDVAKPIGLAAR 253
Query: 428 DSL 430
DSL
Sbjct: 254 DSL 256
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 9 IFPGKRRRET-GGFPGASIIQSQIK-SGVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGA 65
+ P RR T F GA+ I SQIK + +R G TS G R G +I++ + + +G
Sbjct: 283 LIPKTRRALTDSSFNGAAKILSQIKDKSTTHRRIGLTSKGPSPREGNKIYSEDGKTEIGY 342
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
ITSG PSP+ N+A YI+ +K+G + + +R K D VTK+PFV S Y
Sbjct: 343 ITSGSPSPTNGGNVAQAYIDKK-AKIGSPVKIEIRGKLRDGVVTKLPFVPSRLY 395
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 14/116 (12%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
D K+ H F E L+A+QGP + +LQ+ T+ DLS +YF ++ +A I
Sbjct: 145 DELKAFDDVQHNTF----EGTLLAIQGPKAQELLQKFTNEDLSKIYFGQTKFIKLAPISA 200
Query: 510 T--LTRAGYTGEDGVEISVPGEQCTHIVEAL-----LSDE--DV-KLAGLGARDSL 555
T L R+GYTGEDG E+S+P EAL L +E DV K GL ARDSL
Sbjct: 201 TVHLARSGYTGEDGFELSIPSATPDEAAEALGFFNTLVNEYPDVAKPIGLAARDSL 256
>gi|126735196|ref|ZP_01750942.1| glycine cleavage system T protein [Roseobacter sp. CCS2]
gi|126715751|gb|EBA12616.1| glycine cleavage system T protein [Roseobacter sp. CCS2]
Length = 374
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 138/237 (58%), Gaps = 14/237 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+TPL+ LH+S G KMVPFAG+ MPVQY + + HLHTR+K +FDVSHM Q +V G
Sbjct: 5 HKTPLHALHVSLGAKMVPFAGYDMPVQY-PLGVMKEHLHTRAKAGLFDVSHMGQVIVQGA 63
Query: 257 HREE---WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ LE + D+ L PG+ FTN+ GGI DDL++ D +F+V NA+ +
Sbjct: 64 TYADAAAGLEQLIPVDILGLAPGRQRYGFFTNDAGGITDDLMLANR-GDHIFMVVNAACK 122
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ M A SL ++ + ++ +R L+A+QGP + +L D S + FM
Sbjct: 123 AADIADMKA------SLKPELTVTEIT--DRALLALQGPAAEAVLTA-LDARASDMAFMD 173
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EIS+P + +ALL DV+ GLGARDSL
Sbjct: 174 VATLELAGVTAWVSRSGYTGEDGYEISIPATDAARVAQALLDHADVEPVGLGARDSL 230
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA I IK+G +RKR G G P+R G +F D +GAITSG P+
Sbjct: 269 AGGFPGADHILDDIKNGPTRKRVGLLPDGRAPMREGVVLFADKDATDPLGAITSGGFGPT 328
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ Y+ +G ++ +R KR + VTK+PF +N+
Sbjct: 329 IGGPMAMGYVAADYAGIGTRIYGELRGKRQPLTVTKLPFTPANF 372
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + +L D S + FM +AG+ ++R+GYTGEDG EIS+P
Sbjct: 144 DRALLALQGPAAEAVLTA-LDARASDMAFMDVATLELAGVTAWVSRSGYTGEDGYEISIP 202
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ +ALL DV+ GLGARDSL
Sbjct: 203 ATDAARVAQALLDHADVEPVGLGARDSL 230
>gi|330825112|ref|YP_004388415.1| glycine cleavage system T protein [Alicycliphilus denitrificans
K601]
gi|329310484|gb|AEB84899.1| glycine cleavage system T protein [Alicycliphilus denitrificans
K601]
Length = 387
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 146/275 (53%), Gaps = 19/275 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S A TPL LHL G +MVPFAG+SMPVQY + A HLHTR K +FDVSHM Q
Sbjct: 13 ASADALLTTPLNALHLELGARMVPFAGYSMPVQY-PTGLMAEHLHTREKAGLFDVSHMGQ 71
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ G LES+ DV L GK L N++GG+ DDL+ +D+LFL+ N
Sbjct: 72 LKLVGPAAAAALESLMPVDVIGLPVGKQRYGLLLNDEGGVIDDLMFFNQGDDTLFLIVNG 131
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ + D+ + A +G+ Q ++ ++GL+A+QGP ++ L+R S L
Sbjct: 132 ACKAGDIAHIQA------RIGQ--RCQVVTMPDQGLLALQGPQAAAALERLVP-GASQLV 182
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM+ G +TR+GYTGEDG EISVPG Q ALL+ +VK GLGAR+SL
Sbjct: 183 FMSGGGFDWNGASLFITRSGYTGEDGFEISVPGAQAEQFARALLAQPEVKPIGLGARNSL 242
Query: 431 ---------SGDITLNTPVPHGSLKLSNDRFKSLG 456
DI T P +L + + + G
Sbjct: 243 RLEAGLCLYGNDIDATTTPPEAALNWAIQKVRRTG 277
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIK--SGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +QI + ++RKR G + VP+R + N + Q +G +TSG SPS
Sbjct: 281 AGGFPGADKVLAQIDDPASLARKRVGLIAKERVPVREPATLENLDGQHIGQVTSGLLSPS 340
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
L + IA+ Y++P Y++ G EL+ VR K V + V PF+ Y+
Sbjct: 341 LNQPIALAYVQPDYAEAGTELFAMVRGKPVPMVVASTPFLPPRYH 385
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
Q ++ ++GL+A+QGP ++ L+R S L FM+ G +TR+GYTGEDG
Sbjct: 150 QVVTMPDQGLLALQGPQAAAALERLVP-GASQLVFMSGGGFDWNGASLFITRSGYTGEDG 208
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVPG Q ALL+ +VK GLGAR+SL
Sbjct: 209 FEISVPGAQAEQFARALLAQPEVKPIGLGARNSL 242
>gi|409437490|ref|ZP_11264604.1| aminomethyltransferase,tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Rhizobium
mesoamericanum STM3625]
gi|408750918|emb|CCM75762.1| aminomethyltransferase,tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [Rhizobium
mesoamericanum STM3625]
Length = 389
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 145/242 (59%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + H+ TR+ +FDVSHM Q V+
Sbjct: 16 AALKKTPLHALHLSLGARMVPFAGYDMPVQYPA-GVMKEHIQTRTSAGLFDVSHMGQVVI 74
Query: 254 ---TGKHREEWLESICVA--DVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+GK+ + L C+ D+ L G+ FT+E GGI DDL++T L+D LF+V
Sbjct: 75 KAKSGKYEDAALALECLVPVDILGLGEGRQRYGFFTDENGGILDDLMITH-LDDHLFVVV 133
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D+ + K LG + L +R LIA+QGP + +L D+++
Sbjct: 134 NAACKDADLAHLQ------KHLGDTCDITLL---DRALIALQGPRAVEVLAELW-ADVAA 183
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+P ++ + + LL DV+ GLGARD
Sbjct: 184 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPADKAEDVTKRLLEHPDVQPIGLGARD 243
Query: 429 SL 430
SL
Sbjct: 244 SL 245
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K LG + L +R LIA+QGP + +L D++++ FM R C + + C ++
Sbjct: 147 KHLGDTCDITLL---DRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVS 202
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GY+GEDG EIS+P ++ + + LL DV+ GLGARDSL
Sbjct: 203 RSGYSGEDGFEISIPADKAEDVTKRLLEHPDVQPIGLGARDSL 245
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA I ++++ G +R+R G G P+R ++F D + +G +TSG P+
Sbjct: 284 AGGFPGADRILAELERGAARRRVGLRPEGKAPVRGHSKLFADPDGKTEIGEVTSGGFGPT 343
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ + VG +++ VR K + V V+ +PF+ Y
Sbjct: 344 VDGPVAMGYVPVGQAGVGTQVYAEVRGKFLPVTVSTLPFITPTY 387
>gi|448746387|ref|ZP_21728055.1| Glycine cleavage system T protein [Halomonas titanicae BH1]
gi|445566249|gb|ELY22356.1| Glycine cleavage system T protein [Halomonas titanicae BH1]
Length = 375
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 141/243 (58%), Gaps = 19/243 (7%)
Query: 192 SPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+P +E ++TPL+ LHL G KMVPFAG+ MPVQY + + H HTR K +FDVSHM Q
Sbjct: 4 APMSELKQTPLHALHLKLGAKMVPFAGYDMPVQY-PLGVKKEHEHTRQKCGLFDVSHMGQ 62
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
V+G E LE++ AD+ L+ G LFTN +GGI DDL+V D +LV NA
Sbjct: 63 ISVSGDGVAEALETLIPADLMSLEKGAQRYGLFTNTEGGIIDDLMVVNA-GDHFYLVVNA 121
Query: 311 SRRKVDMD---LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLS 367
+ + D+ L +A+ + L +RGL+A+QGP + ++QR +
Sbjct: 122 ACKDQDLTHLRLNLASTHTIEPL------------DRGLLALQGPQARDVMQRLCP-EAC 168
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
L FM TIAG ++R+GYTGEDG EISV + C E LL++ +V+ GLGAR
Sbjct: 169 ELVFMQHGRFTIAGQEVWVSRSGYTGEDGFEISVAADACEAFAEQLLAEPEVEAIGLGAR 228
Query: 428 DSL 430
DSL
Sbjct: 229 DSL 231
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 464 LSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVE 523
+ P +RGL+A+QGP + ++QR + L FM TIAG ++R+GYTGEDG E
Sbjct: 141 IEPLDRGLLALQGPQARDVMQRLCP-EACELVFMQHGRFTIAGQEVWVSRSGYTGEDGFE 199
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
ISV + C E LL++ +V+ GLGARDSL
Sbjct: 200 ISVAADACEAFAEQLLAEPEVEAIGLGARDSL 231
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 21 FPGASIIQSQIKS-GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
FPGA +I Q+ + +RKR G + G P+R G + + +G +TSG PS+ K
Sbjct: 273 FPGADVILHQVDAKDHTRKRVGLLAEGRAPVREGAPLVDEAGNEIGIVTSGSFGPSVGKP 332
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + VR K++ + VT PFVK YY
Sbjct: 333 VAMGYVTREQEAPQSTVLAVVRGKQLPMVVTPTPFVKPGYY 373
>gi|338975241|ref|ZP_08630596.1| glycine cleavage system T protein [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231840|gb|EGP06975.1| glycine cleavage system T protein [Bradyrhizobiaceae bacterium
SG-6C]
Length = 373
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+R PL+DLH++ GGK+VPFAG+ MPVQY A + HLHTR+ +FDVSHM Q V+
Sbjct: 2 KRVPLHDLHVARGGKIVPFAGYEMPVQY-AAGVLKEHLHTRASAGLFDVSHMGQIVLRPK 60
Query: 254 TGKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + LE + D+ + PG+ + FTN+ GGI DDL+V D LFLV NA+
Sbjct: 61 SGKVEDAARALEQLVPQDIVAVAPGRQRYAQFTNDGGGILDDLMVAN-FGDHLFLVVNAA 119
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D A R L ++ L+ +R LIA+QGP ++ +L + ++++ F
Sbjct: 120 CKTED-----EAHLR-NHLSDTCAIEPLT--DRALIALQGPKAAEVLAKLAP-SVTTMKF 170
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + P + GI C ++R+GYTGEDG EISVP + + ALL+D V GLGARDSL
Sbjct: 171 MDAGPHAVLGIACFVSRSGYTGEDGFEISVPAKDAERLATALLADPAVLPIGLGARDSL 229
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP ++ +L + ++++ FM + P + GI C ++R+GYTGEDG EISVP
Sbjct: 143 DRALIALQGPKAAEVLAKLAP-SVTTMKFMDAGPHAVLGIACFVSRSGYTGEDGFEISVP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + ALL+D V GLGARDSL
Sbjct: 202 AKDAERLATALLADPAVLPIGLGARDSL 229
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNA--NDQRVGAITSGCPSPS 74
GGFPGA II Q +G SR+R G + G P+R G ++ + + +G +TSG P+
Sbjct: 268 AGGFPGADIILKQFDTGASRRRVGLRAEGRAPVREGAALYASKTSTDTIGTVTSGGFGPT 327
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
LK +AMGY+ S G ++ VR +R+ ++V+ MPFV + Y
Sbjct: 328 LKAPVAMGYLPTPLSNEGTIVFADVRGQRLPLRVSAMPFVPNGY 371
>gi|119477616|ref|ZP_01617766.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2143]
gi|119449119|gb|EAW30359.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2143]
Length = 373
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 147/243 (60%), Gaps = 17/243 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+DLH+ G KMVPFAG++MPVQY + I HLHTR + +FDVSHM Q + GK
Sbjct: 7 TPLHDLHIELGAKMVPFAGYAMPVQY-PMGILKEHLHTREQAGLFDVSHMGQLRIKGKGI 65
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E LE + D+ L K T ++FTN + GI DDLI+T+ +D FLV NA + D+D
Sbjct: 66 TEALEKLVPVDLASLPLLKQTYAVFTNNEAGIIDDLIITRWADDEFFLVVNAGCKLNDID 125
Query: 319 LMVAAQDRFKSL-GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ K+L G D+ + +++ L+A+QGP + +++ + S+L FM+
Sbjct: 126 HLQ------KNLPGFDLEIM----DQQALLALQGPQARSVMDQLIP-AASALRFMSGCFG 174
Query: 378 TI----AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGD 433
T+ + C +T +GYTGEDG EISVP + T + + LLS E+V+ GLGARDSL +
Sbjct: 175 TMITDSGSVNCFVTCSGYTGEDGYEISVPAQYATAVAKKLLSFEEVQPIGLGARDSLRLE 234
Query: 434 ITL 436
+ L
Sbjct: 235 VGL 237
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN 57
I + LL K RR GGF GA II QI SG RKR G G PIR G E+
Sbjct: 251 IEANLLWSISKNRRIGGDREGGFLGADIIFKQIASGAPRKRVGLKIEGRAPIREGAELAT 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ + +G +TSG PS +AMGY++ A+S +G +L+ VR K + V++TKMPF+
Sbjct: 311 ESGEIIGRVTSGGFGPSYNGPVAMGYVQTAFSPLGTKLFALVRKKHIPVEITKMPFIPQK 370
Query: 118 Y 118
Y
Sbjct: 371 Y 371
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI----AGIPCTLTRAGYTGEDGV 522
+++ L+A+QGP + +++ + S+L FM+ T+ + C +T +GYTGEDG
Sbjct: 140 DQQALLALQGPQARSVMDQLIPAA-SALRFMSGCFGTMITDSGSVNCFVTCSGYTGEDGY 198
Query: 523 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP + T + + LLS E+V+ GLGARDSL
Sbjct: 199 EISVPAQYATAVAKKLLSFEEVQPIGLGARDSL 231
>gi|149516890|ref|XP_001515256.1| PREDICTED: aminomethyltransferase, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 343
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 119/182 (65%), Gaps = 4/182 (2%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G+ R + +ES+ V D+ EL +G LSLFTNE+GGI DDLIVT T ++ L++VSN
Sbjct: 26 QTKILGRDRVKLMESLVVGDIAELKQNQGMLSLFTNEEGGIIDDLIVTNTSDNHLYVVSN 85
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A + DM LM KS G D+ L+ + E L+A+QGP ++ +LQ DL L
Sbjct: 86 AGCCEKDMTLMQNKVKELKSAGCDVDLEMI---ENALVALQGPSAAQVLQAGVSDDLRKL 142
Query: 370 YFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
FMTS + G+P C +TR GYTGEDGVEISVP E+ + E LL +++VKLAGL ARD
Sbjct: 143 PFMTSAVMNVFGVPGCRVTRCGYTGEDGVEISVPAERAVQLAELLLGNKEVKLAGLAARD 202
Query: 429 SL 430
SL
Sbjct: 203 SL 204
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 72/109 (66%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA++I QIK + RKR G +TG P+R I NA +GA+TSGCP
Sbjct: 233 GKRRRAAMDFPGAAVIVPQIKGKLKRKRVGLMTTGAPVRQHSPILNAEGVVIGAVTSGCP 292
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY++ +SK G L V VR K+ V+KMPFV + YYT
Sbjct: 293 SPCLKKNVAMGYVDGDHSKPGTPLQVEVRKKKQAAIVSKMPFVPTRYYT 341
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
KS G D+ L+ + E L+A+QGP ++ +LQ DL L FMTS + G+P C
Sbjct: 103 LKSAGCDVDLEMI---ENALVALQGPSAAQVLQAGVSDDLRKLPFMTSAVMNVFGVPGCR 159
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP E+ + E LL +++VKLAGL ARDSL
Sbjct: 160 VTRCGYTGEDGVEISVPAERAVQLAELLLGNKEVKLAGLAARDSL 204
>gi|258543477|ref|YP_003188910.1| glycine cleavage system protein T [Acetobacter pasteurianus IFO
3283-01]
gi|384043397|ref|YP_005482141.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-12]
gi|384051914|ref|YP_005478977.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-03]
gi|384055021|ref|YP_005488115.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-07]
gi|384058256|ref|YP_005490923.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-22]
gi|384060897|ref|YP_005500025.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-26]
gi|384064189|ref|YP_005484831.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-32]
gi|384120200|ref|YP_005502824.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256634555|dbj|BAI00531.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-01]
gi|256637613|dbj|BAI03582.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-03]
gi|256640665|dbj|BAI06627.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-07]
gi|256643722|dbj|BAI09677.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-22]
gi|256646777|dbj|BAI12725.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-26]
gi|256649830|dbj|BAI15771.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-32]
gi|256652818|dbj|BAI18752.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655874|dbj|BAI21801.1| glycine cleavage system T protein [Acetobacter pasteurianus IFO
3283-12]
Length = 378
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 138/237 (58%), Gaps = 16/237 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPLY LH GGKMVPFAG++MP+QY A I A H H R V +FDVSHM Q ++ +
Sbjct: 9 TPLYSLHEESGGKMVPFAGYAMPLQY-ADGIMAEHRHVREHVGLFDVSHMGQVLLRPRSG 67
Query: 259 EE-----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ LE + AD+ L G+ + FTN +GGI DDL+V + LED L LV NA+ +
Sbjct: 68 DVDDAALALEKLVPADIAALKHGRQRYTQFTNAKGGILDDLMVAR-LEDGLLLVVNAACK 126
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D++L+ Q + + LQ E+R L+A+QGP + L D D+ + FM
Sbjct: 127 EADLELL---QSELVAECV-VELQ----EDRALLALQGPEAEQTLAVFAD-DVRKMVFMD 177
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
R + G C ++R+GYTGEDG EISV + + LL +VKL GLGARDSL
Sbjct: 178 VRTLDVDGARCVISRSGYTGEDGFEISVSAKDADRVARKLLEQPNVKLIGLGARDSL 234
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + L D D+ + FM R + G C ++R+GYTGEDG EISV
Sbjct: 147 EDRALLALQGPEAEQTLAVFAD-DVRKMVFMDVRTLDVDGARCVISRSGYTGEDGFEISV 205
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL +VKL GLGARDSL
Sbjct: 206 SAKDADRVARKLLEQPNVKLIGLGARDSL 234
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA II Q+++GVSR+R G G P+R ++ + +G +TSG P+
Sbjct: 273 AGGFPGADIILGQLENGVSRRRVGLRPEGRAPVRHDAPLYADAEFATHIGKVTSGAFGPT 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ S+ G ++ +R + V ++ +PFV +++
Sbjct: 333 VGGPVAMGYVATNDSQTGHTVFAELRGRSVPSVISALPFVPAHF 376
>gi|398841480|ref|ZP_10598698.1| glycine cleavage system T protein [Pseudomonas sp. GM102]
gi|398108313|gb|EJL98283.1| glycine cleavage system T protein [Pseudomonas sp. GM102]
Length = 374
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 145/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G+ ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGEQCSIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAEALARALLAEPEVAAIGLGARDSL 231
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGDIIGSVCSGGFGPTLGGPLAMGYLDSAYIALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K +G+ ++ L EER L+A+QGP + T+L R +++ + FM + G+ C ++
Sbjct: 131 KHIGEQCSIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFARVKLLGVDCFVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVPAANAEALARALLAEPEVAAIGLGARDSL 231
>gi|398923893|ref|ZP_10660946.1| glycine cleavage system T protein [Pseudomonas sp. GM48]
gi|398174400|gb|EJM62197.1| glycine cleavage system T protein [Pseudomonas sp. GM48]
Length = 374
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 145/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + E LE++ D+ +L G ++FTN GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAEALETLVPVDIIDLPVGMQRYAMFTNATGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + K +G ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDLAHLQ------KHIGNQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + + ALL++++V+ GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPADSAEALARALLAEQEVEAIGLGARDSL 231
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRTDGARAGGFPGAETVFAQQQAGVKRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G++ SG P+L +AMGY++ AY + +W VR KRV + V+KMPFV
Sbjct: 311 EAGDIIGSVCSGGFGPTLGGPLAMGYVDSAYIALDTPVWAIVRGKRVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFARVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + ALL++++V+ GLGARDSL
Sbjct: 203 PADSAEALARALLAEQEVEAIGLGARDSL 231
>gi|421588800|ref|ZP_16034041.1| glycine cleavage system aminomethyltransferase T [Rhizobium sp.
Pop5]
gi|403706442|gb|EJZ21705.1| glycine cleavage system aminomethyltransferase T [Rhizobium sp.
Pop5]
Length = 378
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 146/242 (60%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR++ VFDVSHM Q +V
Sbjct: 5 AALKKTPLHALHLSLGARMVPFAGYDMPVQYPA-GVMKEHLHTRAEAGVFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G++ + L ES+ D+ L G+ FT++ G I DDL++T L+D LF+V
Sbjct: 64 KAKSGRYEDAALALESLVPVDILGLAEGRQRYGFFTDDSGCILDDLMITH-LDDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D+ + A +G + L +R LIA+QGP + +L D+++
Sbjct: 123 NAACKAADVAHLQA------HIGDQCDITVL---DRALIALQGPRAVEVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EISVP ++ + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVPSDKAVDVTMRLLEHPDVQAIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EISVP
Sbjct: 148 DRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 207 SDKAVDVTMRLLEHPDVQAIGLGARDSL 234
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPS 74
GGFPG+ I S++++G +R+R G G P+R +++ + +V G +TSG PS
Sbjct: 273 AGGFPGSGRILSELENGAARRRVGLKPEGKAPVRGHAKLYADAEGKVEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ ++S VG ++ VR K + V V+ +PFV Y
Sbjct: 333 VEGPVAMGYVPVSHSAVGSLVYAEVRGKFLPVTVSALPFVTPTY 376
>gi|410094185|ref|ZP_11290636.1| glycine cleavage system T protein [Pseudomonas viridiflava
UASWS0038]
gi|409758400|gb|EKN43703.1| glycine cleavage system T protein [Pseudomonas viridiflava
UASWS0038]
Length = 374
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 137/232 (59%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRAQAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FTNE GGI DDL+V + L LV NA+ + D+
Sbjct: 68 AKALETLVPVDIVDLPVGMQRYAMFTNETGGILDDLMVANLGNEQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++++ FM
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVATMTFMQFATVK 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EISVP ++ + LL + +V GLGARDSL
Sbjct: 180 LMEVTCYVSRSGYTGEDGYEISVPSDKAEALARRLLEEPEVAPIGLGARDSL 231
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA I +Q ++ V +KR G P+R G +I +
Sbjct: 251 IEASLLWAISKVRRADGARAGGFPGAEQIFAQQQARVDKKRVGLLPQERTPVREGTQIVD 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A D+ +G + SG PSL +AM Y++ Y+ + +W VR K+V + V KMPFV
Sbjct: 311 AQDKVIGTVCSGGFGPSLGGPLAMAYLDSRYTALNTPVWAMVRGKKVPMLVAKMPFVAQR 370
Query: 118 YY 119
Y+
Sbjct: 371 YF 372
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++++ FM + + C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVATMTFMQFATVKLMEVTCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + LL + +V GLGARDSL
Sbjct: 203 PSDKAEALARRLLEEPEVAPIGLGARDSL 231
>gi|346993270|ref|ZP_08861342.1| glycine cleavage system T protein [Ruegeria sp. TW15]
Length = 358
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ GGK+V FAG+ MPVQY + I H R K +VFDVSHM Q ++ G++
Sbjct: 1 TPLHALHVELGGKLVDFAGWEMPVQY-PLGIMGEHKQCREKAAVFDVSHMGQVILKGENV 59
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E LE++C L GK FTN +GGI DDLIV+ D F+V NA+ R D+
Sbjct: 60 GEKLEALCPQAYATLKEGKARYGFFTNAEGGIMDDLIVSNA-GDHYFVVVNAALRHQDIP 118
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
M D ++ + +R L+AVQGP + ++ L FM +
Sbjct: 119 HMREHLD---------GVEVIEIFDRALVAVQGPAAENVVGELCPA-ARDLKFMETTVAD 168
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R GYTGEDG EIS+P ++ I +A L+ ED AGLGARDSL
Sbjct: 169 INGVECRISRLGYTGEDGYEISIPEDKAIEITKAFLAHEDCAAAGLGARDSL 220
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+E GGFPGA +Q ++ G ++K G G P R G EI +N +G ITSG
Sbjct: 250 KRRKEEGGFPGADRVQKELTEGPAKKLVGIKPEGRAPARQGVEIQCSNGNTIGQITSGVF 309
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ +++ G + + +R K ++ +PFV NY
Sbjct: 310 GPTVGGPVAMGYVAAGHTEPGETVNLIIRGKPQPAQIVALPFVTQNY 356
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+AVQGP + ++ L FM + I G+ C ++R GYTGEDG EIS+P
Sbjct: 134 DRALVAVQGPAAENVVGELCPA-ARDLKFMETTVADINGVECRISRLGYTGEDGYEISIP 192
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ I +A L+ ED AGLGARDSL
Sbjct: 193 EDKAIEITKAFLAHEDCAAAGLGARDSL 220
>gi|338999629|ref|ZP_08638271.1| glycine cleavage system protein T (aminomethyltransferase)
[Halomonas sp. TD01]
gi|338763527|gb|EGP18517.1| glycine cleavage system protein T (aminomethyltransferase)
[Halomonas sp. TD01]
Length = 370
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL++LHLS G KMVPFAG+ MPVQY + + H HTR + +FDVSHM Q V+G
Sbjct: 5 KQTPLHELHLSLGAKMVPFAGYDMPVQY-PLGVKKEHEHTRQQCGLFDVSHMGQIAVSGD 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ E LES+ AD+ L G+ L T GGI DDL+ D +LV NA+ ++ D
Sbjct: 64 NVAEALESLIPADLVGLSKGEQRYGLLTGTDGGIIDDLMAVNA-GDHFYLVVNAACKEQD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A R +LG H++ L +RGL+A+QGP + +++R D L FM
Sbjct: 123 I-----AHLR-TNLGATHHIEVL---DRGLLALQGPQARDVMKRLCP-DACELTFMQHGR 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T++G ++R+GYTGEDG EISV E C E LL++ +V+ GLGARDSL
Sbjct: 173 FTMSGQEVWISRSGYTGEDGFEISVASETCQTFAEQLLAEPEVEAIGLGARDSL 226
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+LG H++ L +RGL+A+QGP + +++R D L FM T++G ++R
Sbjct: 129 NLGATHHIEVL---DRGLLALQGPQARDVMKRLCP-DACELTFMQHGRFTMSGQEVWISR 184
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISV E C E LL++ +V+ GLGARDSL
Sbjct: 185 SGYTGEDGFEISVASETCQTFAEQLLAEPEVEAIGLGARDSL 226
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKS-GVSRKRTGFTSTG-VPIRPGYEIF 56
+ + L+ GK RR G GFPGA +I Q+ + +RKR G + G P+R G +
Sbjct: 246 VEAGLIWAIGKPRRHGGERPAGFPGADLILHQVAAKDHARKRVGLVAEGRAPVREGALLV 305
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+A +G +TSG PS+ K IAMGY+ + ++ VR K++ + VT PFVK
Sbjct: 306 DAKGNEIGVVTSGGFGPSVGKPIAMGYVGREWEAPETTVYALVRGKQLPMAVTATPFVKP 365
Query: 117 NYY 119
YY
Sbjct: 366 GYY 368
>gi|398859997|ref|ZP_10615660.1| glycine cleavage system T protein [Pseudomonas sp. GM79]
gi|398235621|gb|EJN21436.1| glycine cleavage system T protein [Pseudomonas sp. GM79]
Length = 374
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 144/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K LG ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHLGDQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAEALARALLAEPEVGAIGLGARDSL 231
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGSVCSGGFGPTLGGPLAMGYLDSAYIALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K LG ++ L EER L+A+QGP + T+L R +++ + FM + G+ C ++
Sbjct: 131 KHLGDQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFARVKLLGVDCFVS 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 189 RSGYTGEDGFEISVPAANAEALARALLAEPEVGAIGLGARDSL 231
>gi|50418743|ref|XP_457891.1| DEHA2C04708p [Debaryomyces hansenii CBS767]
gi|49653557|emb|CAG85941.1| DEHA2C04708p [Debaryomyces hansenii CBS767]
Length = 395
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 143/251 (56%), Gaps = 18/251 (7%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS S +TPLYD H+ GGKMVP+AGF MPV Y + T SH R+ V +FDVSHMLQ
Sbjct: 11 SSGSQLIKTPLYDCHVEFGGKMVPYAGFEMPVLYKDQTHTESHNWVRNNVGLFDVSHMLQ 70
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
++G++ ++L+ + ++ EL+ +LS+F NEQGG+ DD I+TK E+ ++VSNA
Sbjct: 71 HRLSGQNVADFLQKVTPINLSELEVNSSSLSVFLNEQGGVIDDCIITKHGENEYYMVSNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R+ D+ + F + D E L+A+QGP ++ ILQ+ T+ L L
Sbjct: 131 GCREKDIAFLKKELQNFSGVNHDTF-------EGTLLAIQGPKAAEILQKFTNESLKDLT 183
Query: 371 FMTSRPCTIAGI---PCTLTRAGYTGEDGVEISVPGEQCTHIVEA------LLSD--EDV 419
F SR ++ I + R GYTGEDG E+S+P E+ L+++ + V
Sbjct: 184 FGKSRFSQLSSIINSQVHIARCGYTGEDGFELSIPSSTAQETKESQEFFRTLINEYPDIV 243
Query: 420 KLAGLGARDSL 430
K GL ARDSL
Sbjct: 244 KPIGLAARDSL 254
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK--SGVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGA 65
+ P RR++ F GAS I +QIK S + KR G + G R +++ A+ + VG
Sbjct: 281 LIPKSRRQDDATFNGASNILAQIKDRSLFTHKRVGIRTKGPSPRDDCKVYTADGKDEVGY 340
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
ITSG PSP+ N+A GYI+ K+G E+ V +R K D ++KMPFV SNYY
Sbjct: 341 ITSGAPSPTSGGNVAQGYIKNGL-KIGTEVKVEIRGKLRDGVISKMPFVPSNYY 393
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI---PCTLTRAGYTGEDGVEI 524
E L+A+QGP ++ ILQ+ T+ L L F SR ++ I + R GYTGEDG E+
Sbjct: 156 EGTLLAIQGPKAAEILQKFTNESLKDLTFGKSRFSQLSSIINSQVHIARCGYTGEDGFEL 215
Query: 525 SVPGEQCTHIVEA------LLSD--EDVKLAGLGARDSL 555
S+P E+ L+++ + VK GL ARDSL
Sbjct: 216 SIPSSTAQETKESQEFFRTLINEYPDIVKPIGLAARDSL 254
>gi|398898669|ref|ZP_10648491.1| glycine cleavage system T protein [Pseudomonas sp. GM50]
gi|398183873|gb|EJM71343.1| glycine cleavage system T protein [Pseudomonas sp. GM50]
Length = 374
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 145/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G+ ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGEQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGYEISVPAANAEALARALLAEPEVAAIGLGARDSL 231
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGSVCSGGFGPTLGGPLAMGYLDSAYIALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFARVKLLGVDCFVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAANAEALARALLAEPEVAAIGLGARDSL 231
>gi|452846785|gb|EME48717.1| hypothetical protein DOTSEDRAFT_67678 [Dothistroma septosporum
NZE10]
Length = 487
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 148/253 (58%), Gaps = 21/253 (8%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RT LYDLHL +GGKMVPF G+ MPVQY +S+ SH TR K S+FDV HM+Q V G
Sbjct: 83 RTALYDLHLQNGGKMVPFGGYEMPVQYSDLSVGESHHWTREKASLFDVGHMVQYHVEGPG 142
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKTLEDS----LFLVSNASR 312
E +LESI A + E+ G +LS + Q GGI DD I+T+ LED ++V+NA
Sbjct: 143 AEAFLESITPAGLKEMKAGTASLSALLHPQTGGIIDDCIITR-LEDGPKHRFYVVTNAGC 201
Query: 313 RKVDMDLMVAAQDRFKSLGKDI-HLQFLSAEER--GLIAVQGPLSSTILQ----RHTDLD 365
R+ D + +A + + + + L+ + ++ + GL+A+QGPLS ILQ R +D
Sbjct: 202 REKDYRFLSSAIETWDNTVNPVASLRHVESDGQPYGLVAIQGPLSLEILQSALARACKVD 261
Query: 366 LSSLYFMTSRPCTI-----AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDE 417
+ YF + + T+ +P +R GYTGEDG E+S+ Q + + LL + E
Sbjct: 262 VGKWYFGSMKYITLDLPSGESLPIVASRGGYTGEDGFELSIHPSQTVEVTKHLLETATPE 321
Query: 418 DVKLAGLGARDSL 430
++ AGLGARDSL
Sbjct: 322 KLRFAGLGARDSL 334
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 71/120 (59%), Gaps = 8/120 (6%)
Query: 12 GKRRR--ETGGFPGASIIQSQIKS------GVSRKRTGFTSTGVPIRPGYEIFNANDQRV 63
GK RR E F GA I SQ+ + GVSR+R G T G P R G EI + + +
Sbjct: 363 GKSRRSGELASFNGAETIISQLTAKSKGGAGVSRRRVGLTVEGAPAREGAEIVDTDGNVI 422
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
G ITSGCPSP++KKNIAMGYI+ K G E+ V VR K+ VTKMPFV S YY K
Sbjct: 423 GKITSGCPSPTMKKNIAMGYIKNGMHKSGTEVQVVVRGKKRKAVVTKMPFVASKYYKEEK 482
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 470 GLIAVQGPLSSTILQ----RHTDLDLSSLYFMTSRPCTI-----AGIPCTLTRAGYTGED 520
GL+A+QGPLS ILQ R +D+ YF + + T+ +P +R GYTGED
Sbjct: 237 GLVAIQGPLSLEILQSALARACKVDVGKWYFGSMKYITLDLPSGESLPIVASRGGYTGED 296
Query: 521 GVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
G E+S+ Q + + LL + E ++ AGLGARDSL
Sbjct: 297 GFELSIHPSQTVEVTKHLLETATPEKLRFAGLGARDSL 334
>gi|398854479|ref|ZP_10611039.1| glycine cleavage system T protein [Pseudomonas sp. GM80]
gi|398235669|gb|EJN21481.1| glycine cleavage system T protein [Pseudomonas sp. GM80]
Length = 374
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 145/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLSKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTREQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNESGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + K +G + L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDLAHLQ------KHIGAQCTITELF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M ++ G+ C ++R+GYTGEDG EISVP + + ALL++ +V+ GLGARDSL
Sbjct: 173 MQFNRVSLLGVDCFVSRSGYTGEDGFEISVPAAEAAKLARALLAEPEVEAIGLGARDSL 231
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV+RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFTQQQNGVARKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A + +G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 AAGEIIGSVCSGGFGPTLGGPLAMGYLDSAYVALDTAVWAIVRGKKVQMLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM ++ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFNRVSLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + ALL++ +V+ GLGARDSL
Sbjct: 203 PAAEAAKLARALLAEPEVEAIGLGARDSL 231
>gi|118590749|ref|ZP_01548150.1| Glycine cleavage system T protein [Stappia aggregata IAM 12614]
gi|118436725|gb|EAV43365.1| Glycine cleavage system T protein [Stappia aggregata IAM 12614]
Length = 383
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 144/241 (59%), Gaps = 17/241 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+DLH+ G +MVPFAG+SMPVQY A I A H TR+K +FDVSHM Q ++ G
Sbjct: 11 KQTPLHDLHVELGARMVPFAGYSMPVQYKA-GIMAEHQQTRTKAGLFDVSHMGQALLIGP 69
Query: 257 HRE---EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS----LFLVSN 309
E LE++ ++ EL G+ ++ N++GGI DDL+VT+ L + L LV N
Sbjct: 70 DHETTARALEALTPSNFVELGHGRQRYTVLLNDEGGIIDDLMVTRPLSEDEDGKLMLVVN 129
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
ASR+ VD A R + L ++ L+ + E+R LIAVQGP + + L
Sbjct: 130 ASRKDVDY-----AHLR-ERLPDNVTLEVI--EDRALIAVQGP-EAVAAVAAHAPQAADL 180
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FM + P GI C + RAGYTGEDGVE+SVP I ALL+D+ V+ GLGARDS
Sbjct: 181 GFMAAAPMEFDGIDCHVARAGYTGEDGVEMSVPAGAAEAIARALLADDRVEPIGLGARDS 240
Query: 430 L 430
L
Sbjct: 241 L 241
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPGA IQ ++++G R R G G P R G EI +G +TSG
Sbjct: 271 KRRREEGGFPGAERIQGELENGPGRIRVGLRLDGKAPAREGAEIAQPGGPVIGIVTSGGF 330
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
+P++ IAMGY+ +S++G L + VR KR+ V MPFV + YY PK
Sbjct: 331 APTVGAPIAMGYVPSEHSEIGTPLELIVRGKRLPATVADMPFVPNRYYRKPK 382
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R LIAVQGP + + L FM + P GI C + RAGYTGEDGVE+SV
Sbjct: 154 EDRALIAVQGP-EAVAAVAAHAPQAADLGFMAAAPMEFDGIDCHVARAGYTGEDGVEMSV 212
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P I ALL+D+ V+ GLGARDSL
Sbjct: 213 PAGAAEAIARALLADDRVEPIGLGARDSL 241
>gi|75675478|ref|YP_317899.1| glycine cleavage system aminomethyltransferase T [Nitrobacter
winogradskyi Nb-255]
gi|74420348|gb|ABA04547.1| glycine cleavage system T protein [Nitrobacter winogradskyi Nb-255]
Length = 383
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 142/239 (59%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
Q+TPL+ L L GGKMV FAG+ MPVQY A + HLHTR+K +FDVSHM Q +
Sbjct: 12 QKTPLHALLLERGGKMVAFAGYDMPVQY-ASGVLKEHLHTRAKAGLFDVSHMGQIALRPK 70
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G R+ L E + D+ + PG+ + FTN GG+ DDL+V D LFLV N +
Sbjct: 71 SGDVRDAALALERLVPQDIVAVAPGRQRYAQFTNPAGGLLDDLMVA-NFGDHLFLVVNGA 129
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D A R + L ++ L+ +R LIA+QGP ++++L + ++ ++ F
Sbjct: 130 CKAAD-----EAHLR-EHLSDACAIEVLT--DRALIALQGPKAASVLAKKCP-EVPAMKF 180
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + P + G+ C ++R+GYTGEDG EIS+P + +V ALL D DV GLGARDSL
Sbjct: 181 MEAGPRQVGGVACFVSRSGYTGEDGYEISIPAARAEDVVSALLDDPDVAPVGLGARDSL 239
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP ++++L + ++ ++ FM + P + G+ C ++R+GYTGEDG EIS+P
Sbjct: 153 DRALIALQGPKAASVLAKKCP-EVPAMKFMEAGPRQVGGVACFVSRSGYTGEDGYEISIP 211
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ +V ALL D DV GLGARDSL
Sbjct: 212 AARAEDVVSALLDDPDVAPVGLGARDSL 239
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPS 74
GGFPGA++I Q + G +R+R G G P+R G +F A+ +GA+TSG PS
Sbjct: 278 AGGFPGANVILPQFEQGAARRRVGLRPEGRAPVREGAPLFADAASADSIGAVTSGGFGPS 337
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L IAMGY+ +++ G ++ VR +R+ +++ MPFV NY
Sbjct: 338 LNAPIAMGYLPVSHAATGGLVYAEVRGQRLPLRICAMPFVPHNY 381
>gi|261192571|ref|XP_002622692.1| glycine cleavage system T protein [Ajellomyces dermatitidis
SLH14081]
gi|239589174|gb|EEQ71817.1| glycine cleavage system T protein [Ajellomyces dermatitidis
SLH14081]
gi|239610293|gb|EEQ87280.1| glycine cleavage system T protein [Ajellomyces dermatitidis ER-3]
Length = 495
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 148/257 (57%), Gaps = 23/257 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH +H KM FAGFSMP+ YG +S SH TR+K S+FDVSHM+Q + G
Sbjct: 90 KKTQLYDLHAAHKAKMASFAGFSMPLVYGDLSHAESHHWTRNKASLFDVSHMVQHHIRGP 149
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTN-EQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ L I + ++ L TLS F + E GGI DD ++T+ +S +LV+NA RRK
Sbjct: 150 GALDLLMKITPSSLNLLQDNCSTLSCFLDRETGGILDDTVITRLGPESFYLVTNAGRRKE 209
Query: 316 DMDLMVAAQDRFKSL----GKDIHLQFLSAEERGLIAVQGPLSSTILQR-------HTDL 364
D++ + + F+ ++ + + + R L+A+QGPLS++ILQ D
Sbjct: 210 DLEFLEKEIEEFRQTHDPSSRESVINWSILDNRALVALQGPLSASILQSLITPGEASIDS 269
Query: 365 DLSSLYFMTSRPCTIAGIPCT-------LTRAGYTGEDGVEISVP----GEQCTHIVEAL 413
DLS+L+F R I+ T ++R GYTGEDG EIS+P + + E L
Sbjct: 270 DLSTLHFGQCRSLHISFPDGTHSPSRLLVSRTGYTGEDGFEISIPTDTDAQLPMRVCELL 329
Query: 414 LSDEDVKLAGLGARDSL 430
LS+ DV+LAGL ARDSL
Sbjct: 330 LSNPDVRLAGLAARDSL 346
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 18/107 (16%)
Query: 467 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTIAGIPCT-------LT 512
+ R L+A+QGPLS++ILQ D DLS+L+F R I+ T ++
Sbjct: 240 DNRALVALQGPLSASILQSLITPGEASIDSDLSTLHFGQCRSLHISFPDGTHSPSRLLVS 299
Query: 513 RAGYTGEDGVEISVP----GEQCTHIVEALLSDEDVKLAGLGARDSL 555
R GYTGEDG EIS+P + + E LLS+ DV+LAGL ARDSL
Sbjct: 300 RTGYTGEDGFEISIPTDTDAQLPMRVCELLLSNPDVRLAGLAARDSL 346
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAND--Q 61
GK RR+ + GF GAS+I Q+ S ++ +R G T +G P R G I + D
Sbjct: 375 GKDRRDPSSPSSGFNGASVILPQLASPARTLTERRVGLTIESGPPAREGALIVDMADGTT 434
Query: 62 RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++G +TSG PSP+L NIA+GY++ + K G E+ V VR K V PFV + +Y
Sbjct: 435 QIGVVTSGMPSPTLGGANIALGYVKQGFHKKGTEVGVLVRKKVRKGTVAATPFVPTKFY 493
>gi|340029775|ref|ZP_08665838.1| glycine cleavage system T protein [Paracoccus sp. TRP]
Length = 370
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 136/237 (57%), Gaps = 17/237 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYDLHLS G KMVPFAG+ MPVQY + + HLHTR+ +FDVSHM Q ++ G
Sbjct: 5 RRTMLYDLHLSRGAKMVPFAGWEMPVQY-PMGVLNEHLHTRAHAGLFDVSHMGQVILRGP 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E LE++ DV L G+ LFTN GGI DDL++ D L LV NA+ + D
Sbjct: 64 GVAEALETLVPTDVLGLAEGRQRYGLFTNAVGGILDDLMIANK-GDHLLLVVNAACVEQD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAE---ERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ + + + Q +S E +RGL+A+QGP + +L R ++++ FM
Sbjct: 123 IGHL-----------RQLEAQGISVEPVTDRGLLALQGPEAEAVLTRLVP-GVAAMRFMD 170
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP + EALL++ +V GLGARDSL
Sbjct: 171 VAEFDWQGATLWVSRSGYTGEDGFEISVPADHAVAFAEALLAEPEVAPIGLGARDSL 227
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+RGL+A+QGP + +L R ++++ FM G ++R+GYTGEDG EISVP
Sbjct: 141 DRGLLALQGPEAEAVLTRLVP-GVAAMRFMDVAEFDWQGATLWVSRSGYTGEDGFEISVP 199
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EALL++ +V GLGARDSL
Sbjct: 200 ADHAVAFAEALLAEPEVAPIGLGARDSL 227
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
+GGFPG I +++ G SR R G G PIR G EIF+A + + +G ++SG PS
Sbjct: 266 SGGFPGDEEILTELADGPSRLRRGLRPEGRAPIREGVEIFDAPEGGELLGRVSSGGFGPS 325
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
IAM I PA G LW +R KR+ V +T +PF + +Y
Sbjct: 326 TGGPIAMA-ILPAVLADGTTLWAELRGKRIPVAITPLPFHQPSY 368
>gi|398936736|ref|ZP_10667101.1| glycine cleavage system T protein [Pseudomonas sp. GM41(2012)]
gi|398167594|gb|EJM55649.1| glycine cleavage system T protein [Pseudomonas sp. GM41(2012)]
Length = 374
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 144/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLSKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LES+ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALESLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGDQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGYEISVPAANAEALARALLAEPEVAAIGLGARDSL 231
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFGQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+GA+ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGDIIGAVCSGGFGPTLGGPLAMGYVDSAYIALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFARVKLLGVDCFVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAANAEALARALLAEPEVAAIGLGARDSL 231
>gi|327356822|gb|EGE85679.1| aminomethyltransferase [Ajellomyces dermatitidis ATCC 18188]
Length = 495
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 148/257 (57%), Gaps = 23/257 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH +H KM FAGFSMP+ YG +S SH TR+K S+FDVSHM+Q + G
Sbjct: 90 KKTQLYDLHAAHKAKMASFAGFSMPLVYGDLSHAESHHWTRNKASLFDVSHMVQHHIRGP 149
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTN-EQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ L I + ++ L TLS F + E GGI DD ++T+ +S +LV+NA RRK
Sbjct: 150 GALDLLLKITPSSLNLLQDNCSTLSCFLDRETGGILDDTVITRLGPESFYLVTNAGRRKE 209
Query: 316 DMDLMVAAQDRFKSL----GKDIHLQFLSAEERGLIAVQGPLSSTILQR-------HTDL 364
D++ + + F+ ++ + + + R L+A+QGPLS++ILQ D
Sbjct: 210 DLEFLEKEIEEFRQTHDPSSRESVINWSILDNRALVALQGPLSASILQSLITPGEASIDS 269
Query: 365 DLSSLYFMTSRPCTIAGIPCT-------LTRAGYTGEDGVEISVP----GEQCTHIVEAL 413
DLS+L+F R I+ T ++R GYTGEDG EIS+P + + E L
Sbjct: 270 DLSTLHFGQCRSLHISFPDGTHSPSRLLVSRTGYTGEDGFEISIPTDTDAQLPMRVCELL 329
Query: 414 LSDEDVKLAGLGARDSL 430
LS+ DV+LAGL ARDSL
Sbjct: 330 LSNPDVRLAGLAARDSL 346
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 18/107 (16%)
Query: 467 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTIAGIPCT-------LT 512
+ R L+A+QGPLS++ILQ D DLS+L+F R I+ T ++
Sbjct: 240 DNRALVALQGPLSASILQSLITPGEASIDSDLSTLHFGQCRSLHISFPDGTHSPSRLLVS 299
Query: 513 RAGYTGEDGVEISVP----GEQCTHIVEALLSDEDVKLAGLGARDSL 555
R GYTGEDG EIS+P + + E LLS+ DV+LAGL ARDSL
Sbjct: 300 RTGYTGEDGFEISIPTDTDAQLPMRVCELLLSNPDVRLAGLAARDSL 346
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAND--Q 61
GK RR+ + GF GAS+I Q+ S ++ +R G T +G P R G I + D
Sbjct: 375 GKDRRDPSSPSSGFNGASVILPQLASPARTLTERRVGLTIESGPPAREGALIVDMADGTT 434
Query: 62 RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++G +TSG PSP+L NIA+GY++ + K G E+ V VR K V PFV + +Y
Sbjct: 435 QIGVVTSGMPSPTLGGANIALGYVKQGFHKKGTEVGVLVRKKVRKGTVAATPFVPTKFY 493
>gi|421180408|ref|ZP_15637967.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa E2]
gi|404545470|gb|EKA54557.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa E2]
Length = 373
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 137/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR +V +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQVGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDYLLLVVNAACKHQDL 125
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 -----AHLRRHLEGRCSVEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPSELAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|339018229|ref|ZP_08644369.1| glycine cleavage system T protein [Acetobacter tropicalis NBRC
101654]
gi|338752698|dbj|GAA07673.1| glycine cleavage system T protein [Acetobacter tropicalis NBRC
101654]
Length = 377
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 137/237 (57%), Gaps = 17/237 (7%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH- 257
TPL+ LH GGKMVPFAG++MP+ Y A I A H H R+ +FDVSHM Q V +
Sbjct: 9 TPLFSLHEDQGGKMVPFAGYAMPLNY-ADGIMAEHRHVRTHAGLFDVSHMGQVKVRARSG 67
Query: 258 ----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ LE + AD+ + G+ + FTN QGGI DDL+V + L+D+L LV NA+ +
Sbjct: 68 SVEAAAKALERLVPADIVAIKNGRQRYTQFTNAQGGILDDLMVAR-LDDTLLLVVNAACK 126
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ LM QD D ++ L EER L+A+QGP + L D+ ++ FM
Sbjct: 127 AADIALM---QDELV----DCLVEPL--EERALLALQGPEAEQALAALAP-DVKTMAFMD 176
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
R + G C ++R+GYTGEDG EISVP + + LL+ +VK GLGARDSL
Sbjct: 177 VRALDVDGASCVISRSGYTGEDGFEISVPALDASRVARQLLAQPNVKPIGLGARDSL 233
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + L D+ ++ FM R + G C ++R+GYTGEDG EISV
Sbjct: 146 EERALLALQGPEAEQALAALAP-DVKTMAFMDVRALDVDGASCVISRSGYTGEDGFEISV 204
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL+ +VK GLGARDSL
Sbjct: 205 PALDASRVARQLLAQPNVKPIGLGARDSL 233
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPSL 75
GGFPGA II Q+++GV+R+R G + G P+R G +++ A +G +TSG P++
Sbjct: 273 GGFPGADIILGQLENGVARRRVGLLAEGRAPVRGGAPLYSDPAFADGIGKVTSGAFGPTV 332
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ AY+ ++ +R + V V +PFV + +
Sbjct: 333 EAPVAMGYVATAYAAPKSPVFAELRGRAVPAVVASLPFVPARF 375
>gi|392865921|gb|EAS31769.2| glycine cleavage system T protein [Coccidioides immitis RS]
Length = 489
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 148/268 (55%), Gaps = 27/268 (10%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S +S SA +T LYDLH+ H KMVPFAG+SMP+QY S SH TR+ S+FDVSH
Sbjct: 75 SSTASKSALNKTELYDLHVEHKAKMVPFAGYSMPLQYADQSHLESHHWTRTHASLFDVSH 134
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLF-TNEQGGIQDDLIVTKTLEDSLFL 306
M+Q + G + L I + + L TLS F E GGI DD ++T+ +S +
Sbjct: 135 MVQHHLIGPGARDLLMKITPSSLDSLKDNHSTLSCFLEQETGGIVDDTVITRLGPESFYF 194
Query: 307 VSNASRRKVDMDLMVAAQDRFK------SLGKDIHLQFLSAEERGLIAVQGPLSSTILQR 360
V+NA RRK D++ + + F+ + IH L + R L+A+QGP S+ +LQ
Sbjct: 195 VTNAGRRKEDLEFLTNEIEAFRQTHDPSTRASVIHWSIL--DNRALLALQGPSSAAVLQS 252
Query: 361 -------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVPGEQC 406
+ DL++L+F R + + P L +R GYTGEDG EIS+P +
Sbjct: 253 LVTQGEASVEGDLTTLHFGQCRQLHLDFPDGSHTPARLLISRTGYTGEDGFEISIPTDHD 312
Query: 407 TH----IVEALLSDEDVKLAGLGARDSL 430
H + E LLS+ +V+LAGL ARDSL
Sbjct: 313 PHLPRRVAELLLSNPEVRLAGLAARDSL 340
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAN--DQ 61
GK RR+ F G+S+I Q+ S + +R G T G P R G I + N D
Sbjct: 369 GKDRRDPSSPLSSFNGSSVILPQLASPAKTLKERRVGLTIEAGAPAREGSPIVDINNPDT 428
Query: 62 RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G ITSG PSPSL NIAMGYI+ K G E+ V VR K VT MP+V++ +Y
Sbjct: 429 HIGIITSGLPSPSLNGTNIAMGYIKQGLHKKGTEVGVLVRKKLRKATVTPMPWVETKFY 487
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 20/115 (17%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AG 506
IH L + R L+A+QGP S+ +LQ + DL++L+F R + +
Sbjct: 228 IHWSIL--DNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQLHLDFPDGSH 285
Query: 507 IPCTL--TRAGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
P L +R GYTGEDG EIS+P + H + E LLS+ +V+LAGL ARDSL
Sbjct: 286 TPARLLISRTGYTGEDGFEISIPTDHDPHLPRRVAELLLSNPEVRLAGLAARDSL 340
>gi|403418894|emb|CCM05594.1| predicted protein [Fibroporia radiculosa]
Length = 360
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 126/221 (57%), Gaps = 3/221 (1%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPFAG+SMP+ YG V ASH H R+ V +FDV HM+Q+ G +LE + + +H
Sbjct: 1 MVPFAGYSMPLSYGDVGAVASHHHVRNSVGIFDVGHMVQSNFRGATTTAFLEWLTPSSLH 60
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFK--S 329
+L TLS+ NE GGI DD ++TK +D+ ++V+NA RR D+ D++
Sbjct: 61 QLPHYSSTLSVLLNEHGGIIDDTVITKHADDAYYIVTNAGRRDRDLAWFKEQLDKWNMSE 120
Query: 330 LGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 389
KD ++ E GL+A+QGP ++ LQ T DL L F S + G + R
Sbjct: 121 KAKDGKVEMEILEGWGLLALQGPEAAQYLQGLTSFDLQGLTFGKSAFVPLEGFNLHVARG 180
Query: 390 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
GYTGEDG EIS+P + + LLS V+L GLGARDSL
Sbjct: 181 GYTGEDGFEISIPPAHTVDVAK-LLSKSPVQLTGLGARDSL 220
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
GK RR F GA + +K G R+R G G P R G ++F + +G +TSG
Sbjct: 249 GKNRRGKADFIGAEGVLKHLKDGPPRRRVGMIVEGAPARQGAKVFAPSGGDLIGTVTSGI 308
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L KNIAMGY++ + K G E+ V VR+K +T MPFV + YY
Sbjct: 309 PSPTLGKNIAMGYVQSGWHKKGTEVEVEVRNKLRRATLTPMPFVTTRYY 357
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 457 KDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 516
KD ++ E GL+A+QGP ++ LQ T DL L F S + G + R GY
Sbjct: 123 KDGKVEMEILEGWGLLALQGPEAAQYLQGLTSFDLQGLTFGKSAFVPLEGFNLHVARGGY 182
Query: 517 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TGEDG EIS+P + + LLS V+L GLGARDSL
Sbjct: 183 TGEDGFEISIPPAHTVDVAK-LLSKSPVQLTGLGARDSL 220
>gi|352103215|ref|ZP_08959743.1| glycine cleavage system protein T (aminomethyltransferase)
[Halomonas sp. HAL1]
gi|350599620|gb|EHA15705.1| glycine cleavage system protein T (aminomethyltransferase)
[Halomonas sp. HAL1]
Length = 370
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 18/237 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ LHL G KMVPFAG+ MPVQY + + H HTR K +FDVSHM Q V+G
Sbjct: 5 KQTPLHALHLKLGAKMVPFAGYEMPVQY-PLGVKKEHEHTRQKCGLFDVSHMGQISVSGN 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ E LE++ AD+ L G LFT+ +GGI DDL+V D +LV NA+ + D
Sbjct: 64 NAAEALETLIPADLVGLAKGAQRYGLFTSTEGGIIDDLMVVNA-GDHFYLVVNAACKDQD 122
Query: 317 MD---LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ L +A+ ++L +RGL+A+QGP + ++QR + L FM
Sbjct: 123 LAHLRLNLASTHEIETL------------DRGLLALQGPQARDVMQRLCP-EACELVFMQ 169
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
TIAG ++R+GYTGEDG EISV + C E LL++ +V+ GLGARDSL
Sbjct: 170 HGRFTIAGQEVWVSRSGYTGEDGFEISVAADACEAFAERLLAEPEVEAIGLGARDSL 226
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+RGL+A+QGP + ++QR + L FM TIAG ++R+GYTGEDG EISV
Sbjct: 140 DRGLLALQGPQARDVMQRLCP-EACELVFMQHGRFTIAGQEVWVSRSGYTGEDGFEISVA 198
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ C E LL++ +V+ GLGARDSL
Sbjct: 199 ADACEAFAERLLAEPEVEAIGLGARDSL 226
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 3 IYSRLLIFPGKRRRE----TGGFPGASIIQSQIKS-GVSRKRTGFTSTG-VPIRPGYEIF 56
+ + L+ GK RR GGFPGA +I Q+ + +RKR G + G P+R G +
Sbjct: 246 VEAGLIWAIGKPRRHGGERAGGFPGADVILHQVDAKDHTRKRVGLLADGRAPVREGATLV 305
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+ +G +TSG PS+ K +AMGY+ ++ VR K++ + VT MPFVK
Sbjct: 306 DEAGNEIGVVTSGSFGPSIGKPVAMGYVTRELEAPQSTVYAVVRGKQLPMVVTPMPFVKP 365
Query: 117 NYY 119
YY
Sbjct: 366 GYY 368
>gi|424895156|ref|ZP_18318730.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393179383|gb|EJC79422.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 378
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 146/242 (60%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V
Sbjct: 5 AALKKTPLHGLHLSLGARMVPFAGYDMPVQYPA-GVMKEHLHTRTEAGLFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ G I DDL+++ L+D LF+V
Sbjct: 64 KAKSGSYEDAALALESLVPVDILGLAEGRQRYGFFTDDSGCILDDLMISH-LDDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NAS ++ D+ + A +G + L+ R LIA+QGP + +L D+++
Sbjct: 123 NASCKEADLAHLQA------HIGDQCDITLLN---RALIALQGPRAVEVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EISVP ++ + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVPSDKAVDVTMRLLEHPDVQAIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EISVP
Sbjct: 148 NRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 207 SDKAVDVTMRLLEHPDVQAIGLGARDSL 234
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPS 74
GGFPG+ I S++++G R+R G G P+R ++ + +V G +TSG PS
Sbjct: 273 AGGFPGSGRILSELENGAVRRRVGLKPEGKAPVRGHARLYADAEGKVEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G ++ VR K + + V+ +PFV Y
Sbjct: 333 VEGPVAMGYVPVSHAAAGTLVYAEVRGKYLPITVSALPFVTPTY 376
>gi|357032346|ref|ZP_09094285.1| aminomethyltransferase (glycine cleavage system T protein)
[Gluconobacter morbifer G707]
gi|356414118|gb|EHH67766.1| aminomethyltransferase (glycine cleavage system T protein)
[Gluconobacter morbifer G707]
Length = 377
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 137/241 (56%), Gaps = 16/241 (6%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A QRTPLYDLHL G KMVPFAG+ MP+QY A + A HLHTR+K +FDVSHM Q +
Sbjct: 4 ALQRTPLYDLHLKLGAKMVPFAGYEMPLQYPA-GLMAEHLHTRAKTGLFDVSHMGQIRIA 62
Query: 255 GKHREE-----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
K + LE++ D+ L G+ + TN+QGGI DDL++ D L ++ N
Sbjct: 63 AKSGDVRDAALALETLVPVDIVGLKAGRQRYGMLTNDQGGILDDLMIANMGRD-LLVIVN 121
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A+ ++ D D + AA + + QF +RGL+A+QGP + + +
Sbjct: 122 AACKEQDADRIEAALQGSCIVTR----QF----DRGLLALQGP-GAQAALAPLCPAAAEM 172
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FM IAG+P TL+R+GYTGEDG EI +P + A+L+ DV GLGARDS
Sbjct: 173 RFMDMIETDIAGVPVTLSRSGYTGEDGYEIGLPASGTEKVARAILAQSDVLPIGLGARDS 232
Query: 430 L 430
L
Sbjct: 233 L 233
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 13 KRRRE----TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGA 65
K RRE GG+PGA ++ Q + GV RKR G + G P+R G +++ D + VG
Sbjct: 263 KVRREGGTREGGYPGADVVLRQAREGVGRKRVGLMAEGRAPVRAGAKLYADADGKTEVGV 322
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG PS+K +AMGY+ ++ G L+ +R K V V + MPFV +
Sbjct: 323 VTSGAFGPSVKAPVAMGYVAADHAATGTPLFAELRGKFVPVHIRAMPFVAPGF 375
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+RGL+A+QGP + + + FM IAG+P TL+R+GYTGEDG EI +P
Sbjct: 147 DRGLLALQGP-GAQAALAPLCPAAAEMRFMDMIETDIAGVPVTLSRSGYTGEDGYEIGLP 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ A+L+ DV GLGARDSL
Sbjct: 206 ASGTEKVARAILAQSDVLPIGLGARDSL 233
>gi|398877028|ref|ZP_10632178.1| glycine cleavage system T protein [Pseudomonas sp. GM67]
gi|398203486|gb|EJM90308.1| glycine cleavage system T protein [Pseudomonas sp. GM67]
Length = 374
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGDQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAEALARALLAEPEVAAIGLGARDSL 231
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGY++ AY + ++ VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGSVCSGGFGPTLSGPLAMGYLDSAYIAIDTPVFAIVRGKKVPLLVSKMPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFARVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAANAEALARALLAEPEVAAIGLGARDSL 231
>gi|398883426|ref|ZP_10638382.1| glycine cleavage system T protein [Pseudomonas sp. GM60]
gi|398196765|gb|EJM83760.1| glycine cleavage system T protein [Pseudomonas sp. GM60]
Length = 374
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGDQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAEALARALLAEPEVAAIGLGARDSL 231
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G++ SG P+L +AMGY++ AY + ++ VR K+V + V+KMPFV
Sbjct: 311 ETGDIIGSVCSGGFGPTLGGPLAMGYLDSAYIAIDTPVFAIVRGKKVPLLVSKMPFVAQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFARVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAANAEALARALLAEPEVAAIGLGARDSL 231
>gi|83953411|ref|ZP_00962133.1| probable aminomethyltransferase (glycine cleavage system t protein)
[Sulfitobacter sp. NAS-14.1]
gi|83842379|gb|EAP81547.1| probable aminomethyltransferase (glycine cleavage system t protein)
[Sulfitobacter sp. NAS-14.1]
Length = 385
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 139/237 (58%), Gaps = 14/237 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPLYDLHL GGKMVPFAG+SMPVQY + + HLHTR+ VFDVSHM Q +VTG
Sbjct: 16 QQTPLYDLHLELGGKMVPFAGYSMPVQY-PMGVMKEHLHTRAAAGVFDVSHMGQVMVTGP 74
Query: 257 HREE---WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ E++ +V L+ G+ FTN+ GGI+DDL+ + +D LF+V NA+ +
Sbjct: 75 SWDAVALAFETLVPMNVLGLEDGRQRYGFFTNDAGGIEDDLMFARRGDD-LFVVVNAACK 133
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ M AA L +I + ++ +R L+AVQGP ++ D + FM
Sbjct: 134 DADIARMKAA------LEPEITVTPIT--DRALVAVQGP-AAGAAVASLDAAADGMRFMD 184
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+ +R+GYTGEDG EISVP +V LL E V+ GLGARDSL
Sbjct: 185 FGTLTLDGVEVWASRSGYTGEDGFEISVPEAHAEALVRRLLEIEGVEPIGLGARDSL 241
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNA--NDQRVGAITSGCPSPS 74
GG+PGA +Q+ GV RKR G G P+R G +F+A +VG ++SG P+
Sbjct: 280 AGGYPGADAVQAAFDDGVDRKRVGLAPEGRAPMRDGTPLFDAATGGTQVGEVSSGSFGPT 339
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ A + + LW VR KR+ V V K+PFV +N+
Sbjct: 340 VGGPVAMGYVSEAQAGIDTMLWGEVRGKRLPVTVAKLPFVAANF 383
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+AVQGP ++ D + FM T+ G+ +R+GYTGEDG EISVP
Sbjct: 155 DRALVAVQGP-AAGAAVASLDAAADGMRFMDFGTLTLDGVEVWASRSGYTGEDGFEISVP 213
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+V LL E V+ GLGARDSL
Sbjct: 214 EAHAEALVRRLLEIEGVEPIGLGARDSL 241
>gi|428171791|gb|EKX40705.1| hypothetical protein GUITHDRAFT_154060 [Guillardia theta CCMP2712]
Length = 414
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 142/248 (57%), Gaps = 12/248 (4%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYG----AVSITASHLHTRSKVSVFDVS 246
+S S ++T +YD H+ GG+MV FA ++MPVQY A SI S H R+K +FDVS
Sbjct: 27 ASTSNLKKTLIYDEHIKLGGQMVDFADWAMPVQYKDHPKADSIINSVKHVRTKTGLFDVS 86
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLE---DS 303
HM GK +LES+ VAD+ L GKGTLS+ NE GGI DD ++TKT + D
Sbjct: 87 HMCSLRWRGKDAIAFLESVTVADIENLAMGKGTLSVIPNENGGIIDDTMITKTSDEKGDH 146
Query: 304 LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD 363
++ V NA D++ + + G D+ ++ + E+RGL A+QGP + ++QR
Sbjct: 147 IYQVINAGCAVKDLEFF---KQKLGKFGGDVSME-VQWEDRGLYALQGPEAVKVMQRLIP 202
Query: 364 L-DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLA 422
+ D + F ++ + G+ + R GYTGEDG EI VPGE + L+ +V A
Sbjct: 203 VYDFKYMNFGDAQNMVMDGMQIFVARCGYTGEDGFEIFVPGENAVKLWRKLIDQPEVHPA 262
Query: 423 GLGARDSL 430
GLGARD+L
Sbjct: 263 GLGARDTL 270
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 12 GKRRRETGG--FPGASIIQSQIKSG---VSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
GK RRE G F G+ I Q+ G V + R G STG P R G EI + + VG +
Sbjct: 299 GKGRREPGARPFTGSDTILKQVAEGPKSVPKMRVGIMSTGAPAREGAEISLPSGEVVGKV 358
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
TSG SP LK+NIAMGYI ++K G E+ V VR K V KMPFV + YY P
Sbjct: 359 TSGAVSPILKQNIAMGYINRPHNKTGTEVVVTVRGKSNPGTVVKMPFVPTQYYKAP 414
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDL-DLSSLYFMTSRPCT 503
L+ + G D+ ++ + E+RGL A+QGP + ++QR + D + F ++
Sbjct: 160 LEFFKQKLGKFGGDVSME-VQWEDRGLYALQGPEAVKVMQRLIPVYDFKYMNFGDAQNMV 218
Query: 504 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ + R GYTGEDG EI VPGE + L+ +V AGLGARD+L
Sbjct: 219 MDGMQIFVARCGYTGEDGFEIFVPGENAVKLWRKLIDQPEVHPAGLGARDTL 270
>gi|163758120|ref|ZP_02165208.1| hypothetical protein HPDFL43_00805 [Hoeflea phototrophica DFL-43]
gi|162284409|gb|EDQ34692.1| hypothetical protein HPDFL43_00805 [Hoeflea phototrophica DFL-43]
Length = 379
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 138/238 (57%), Gaps = 16/238 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +M+ FAG+ MPVQY + + HLHTR+ +FDVSHM Q ++ +
Sbjct: 9 KTPLHSLHLELGARMMAFAGYDMPVQY-PMGVMKEHLHTRAAAGLFDVSHMGQILIRARS 67
Query: 258 RE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
+ LE+I DV L PG+ LFTN++GG++DD +V D L+LV NA+
Sbjct: 68 GDVTDAARALEAITPVDVLGLKPGRQRYGLFTNDKGGLEDDFMVANR-GDHLYLVVNAAC 126
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D+ + A S +I QF RGLIA+QGP++ +L + D + FM
Sbjct: 127 KHEDLARIRTAL----SDSCEIEAQF----GRGLIALQGPVAEAVLASYAP-DAEDMLFM 177
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G P ++R+GY+GEDG EIS+P ++ + LL+D+ V+ GLGARDSL
Sbjct: 178 DVADLKIGGTPVVVSRSGYSGEDGFEISIPADETERVARLLLADDRVEAIGLGARDSL 235
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPSL 75
GGFPGA +I +Q +G +R R G +G P+R G E++++ +G +TSG PS+
Sbjct: 275 GGFPGADVILNQFDTGPARLRVGLQPSGKAPVRAGAELYDSESGGAAIGTVTSGGFGPSV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ S G L+ VR KR+++ V+ +PFV++ Y
Sbjct: 335 GGPVAMGYVPADLSAAGTTLYAEVRGKRLELAVSALPFVQTTY 377
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
+I QF RGLIA+QGP++ +L + D + FM I G P ++R+GY+
Sbjct: 143 EIEAQF----GRGLIALQGPVAEAVLASYAP-DAEDMLFMDVADLKIGGTPVVVSRSGYS 197
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EIS+P ++ + LL+D+ V+ GLGARDSL
Sbjct: 198 GEDGFEISIPADETERVARLLLADDRVEAIGLGARDSL 235
>gi|320031962|gb|EFW13919.1| glycine cleavage system T protein [Coccidioides posadasii str.
Silveira]
Length = 489
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 148/268 (55%), Gaps = 27/268 (10%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S +S SA +T LYDLH+ H KMVPFAG+SMP+QY S SH TR+ S+FDVSH
Sbjct: 75 SSTASKSALNKTELYDLHVEHKAKMVPFAGYSMPLQYADQSHLESHHWTRTHASLFDVSH 134
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFL 306
M+Q + G + L I + + L TLS L E GGI DD ++T+ +S +
Sbjct: 135 MVQHHLIGPGARDLLMKITPSSLDSLKDNHSTLSCLLDQETGGIVDDTVITRLGPESFYF 194
Query: 307 VSNASRRKVDMDLMVAAQDRFK------SLGKDIHLQFLSAEERGLIAVQGPLSSTILQR 360
V+NA RRK D++ + + F+ + IH L + R L+A+QGP S+ +LQ
Sbjct: 195 VTNAGRRKEDLEFLTNEIEAFRQTHDPSTRASVIHWSIL--DNRALLALQGPSSAAVLQS 252
Query: 361 -------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVPGEQC 406
+ DL++L+F R + + P L +R GYTGEDG EIS+P +
Sbjct: 253 LVTQGEASVEGDLTTLHFGQCRQLHLDFPDGSHTPARLLISRTGYTGEDGFEISIPTDHD 312
Query: 407 TH----IVEALLSDEDVKLAGLGARDSL 430
H + E LLS+ +V+LAGL ARDSL
Sbjct: 313 PHLPRRVAELLLSNPEVRLAGLAARDSL 340
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAN--DQ 61
GK RR+ F G+S+I Q+ S + +R G T G P R G I + N D
Sbjct: 369 GKDRRDPSSPLSSFNGSSVILPQLASPAKTLKERRVGLTIEAGAPAREGSPIVDINYPDT 428
Query: 62 RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G ITSG PSPSL NIAMGYI+ K G E+ V VR K VT MP+V++ +Y
Sbjct: 429 HIGIITSGLPSPSLNGTNIAMGYIKQGLHKKGTEVGVLVRKKLRKATVTPMPWVETKFY 487
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 20/115 (17%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AG 506
IH L + R L+A+QGP S+ +LQ + DL++L+F R + +
Sbjct: 228 IHWSIL--DNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQLHLDFPDGSH 285
Query: 507 IPCTL--TRAGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
P L +R GYTGEDG EIS+P + H + E LLS+ +V+LAGL ARDSL
Sbjct: 286 TPARLLISRTGYTGEDGFEISIPTDHDPHLPRRVAELLLSNPEVRLAGLAARDSL 340
>gi|407363383|ref|ZP_11109915.1| glycine cleavage system T protein [Pseudomonas mandelii JR-1]
Length = 374
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNETGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + K +G ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDLAHLQ------KHIGDQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + GI C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFTRVKLLGIECFVSRSGYTGEDGFEISVPAVNAEALARALLAEPEVAAIGLGARDSL 231
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV+RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVNRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+GA+ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGDIIGAVCSGGFGPTLGGPLAMGYLDSAYIAIDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + GI C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRVKLLGIECFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAVNAEALARALLAEPEVAAIGLGARDSL 231
>gi|303320227|ref|XP_003070113.1| glycine cleavage system T protein [Coccidioides posadasii C735
delta SOWgp]
gi|240109799|gb|EER27968.1| glycine cleavage system T protein [Coccidioides posadasii C735
delta SOWgp]
Length = 489
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 148/268 (55%), Gaps = 27/268 (10%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S +S SA +T LYDLH+ H KMVPFAG+SMP+QY S SH TR+ S+FDVSH
Sbjct: 75 SSTASKSALNKTELYDLHVEHKAKMVPFAGYSMPLQYADQSHLESHHWTRTHASLFDVSH 134
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFL 306
M+Q + G + L I + + L TLS L E GGI DD ++T+ +S +
Sbjct: 135 MVQHHLIGPGARDLLMKITPSSLDSLKDNHSTLSCLLDQETGGIVDDTVITRLGPESFYF 194
Query: 307 VSNASRRKVDMDLMVAAQDRFK------SLGKDIHLQFLSAEERGLIAVQGPLSSTILQR 360
V+NA RRK D++ + + F+ + IH L + R L+A+QGP S+ +LQ
Sbjct: 195 VTNAGRRKEDLEFLTNEIEAFRQTHDPSTRASVIHWSIL--DNRALLALQGPSSAAVLQS 252
Query: 361 -------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVPGEQC 406
+ DL++L+F R + + P L +R GYTGEDG EIS+P +
Sbjct: 253 LVTQGEASVEGDLTTLHFGQCRQLHLDFPDGSHTPARLLISRTGYTGEDGFEISIPTDHD 312
Query: 407 TH----IVEALLSDEDVKLAGLGARDSL 430
H + E LLS+ +V+LAGL ARDSL
Sbjct: 313 PHLPRRVAELLLSNPEVRLAGLAARDSL 340
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAN--DQ 61
GK RR+ F G+S+I Q+ S + +R G T G P R G I + N D
Sbjct: 369 GKDRRDPSSPLSSFNGSSVILPQLASPAKTLKERRVGLTIEAGAPAREGSPIVDINNPDT 428
Query: 62 RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G ITSG PSPSL NIAMGYI+ K G E+ V VR K VT MP+V++ +Y
Sbjct: 429 HIGIITSGLPSPSLNGTNIAMGYIKQGLHKKGTEVGVLVRKKLRKATVTPMPWVETKFY 487
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 20/115 (17%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AG 506
IH L + R L+A+QGP S+ +LQ + DL++L+F R + +
Sbjct: 228 IHWSIL--DNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQLHLDFPDGSH 285
Query: 507 IPCTL--TRAGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
P L +R GYTGEDG EIS+P + H + E LLS+ +V+LAGL ARDSL
Sbjct: 286 TPARLLISRTGYTGEDGFEISIPTDHDPHLPRRVAELLLSNPEVRLAGLAARDSL 340
>gi|418053942|ref|ZP_12691998.1| glycine cleavage system T protein [Hyphomicrobium denitrificans
1NES1]
gi|353211567|gb|EHB76967.1| glycine cleavage system T protein [Hyphomicrobium denitrificans
1NES1]
Length = 385
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 130/238 (54%), Gaps = 17/238 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV---- 253
RTPLYDLH +MVPFAG+ MP+QY A I HLHTR+ +FD+SHM Q V
Sbjct: 15 RTPLYDLHCERDARMVPFAGYEMPIQY-APGILKEHLHTRALAGLFDISHMGQIAVRSRS 73
Query: 254 -TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
T + LE + DV L P + + FTN GGI DDL++ DSL LV NA+
Sbjct: 74 GTIQSAALALERVVPVDVAGLMPNRQRYAFFTNGAGGILDDLMIAHR-GDSLLLVVNAAC 132
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D ++A LG D + EER LIA+QGP + +IL + FM
Sbjct: 133 KIADEHYLMA------ELGSDC---IVEREERALIALQGPRAESILATLAP-SCRQMRFM 182
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + G C L R+GY+GEDG EIS+P + IVE LL DV L GLGARDSL
Sbjct: 183 DVQSAMLLGHDCLLMRSGYSGEDGFEISIPRDAARSIVETLLDSPDVALIGLGARDSL 240
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGASII Q++ G +R+R GF + G P+R G +F +D + VGA+TSG P+
Sbjct: 279 AGGFPGASIILHQLEHGAARRRVGFRAEGRAPVRAGALVFAESDDQTPVGAVTSGGYGPT 338
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ IAMGY+ S+ G ++ VR R+ ++VT++PF++ Y
Sbjct: 339 VEGPIAMGYLTTTASQPGTRVFAEVRGARLPLRVTELPFIRPRY 382
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 440 VPHGSLKLSNDRF--KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 497
V + + K++++ + LG D + EER LIA+QGP + +IL + FM
Sbjct: 127 VVNAACKIADEHYLMAELGSDC---IVEREERALIALQGPRAESILATLAP-SCRQMRFM 182
Query: 498 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + G C L R+GY+GEDG EIS+P + IVE LL DV L GLGARDSL
Sbjct: 183 DVQSAMLLGHDCLLMRSGYSGEDGFEISIPRDAARSIVETLLDSPDVALIGLGARDSL 240
>gi|343510577|ref|ZP_08747800.1| glycine cleavage system protein T2 [Vibrio scophthalmi LMG 19158]
gi|342801546|gb|EGU37006.1| glycine cleavage system protein T2 [Vibrio scophthalmi LMG 19158]
Length = 372
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 143/232 (61%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+DLHL G KMVPFAG+ MPVQY + + HLHTR + +FDVSHM Q + G
Sbjct: 8 TPLHDLHLEAGAKMVPFAGYDMPVQY-KLGVKKEHLHTREQAGLFDVSHMGQLRLKGVDA 66
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+LE++ D+ +L G + FTN QGGI DDL+V L D LF+V NA+ + D+
Sbjct: 67 AAFLETLVPVDIIDLPVGNQRYAFFTNAQGGIMDDLMVAN-LGDHLFVVVNAACKTQDIA 125
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ L + + L+ + E+R L+A+QGP + +LQR ++ + FM +
Sbjct: 126 HLQ------HHLPQGVELEVI--EDRALLALQGPKAVNVLQR-LQPAVAEMIFMDVGQYS 176
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP E + +ALL++E+V+ GLGARDSL
Sbjct: 177 LLGVDCLISRSGYTGEDGYEISVPAEHAKALAQALLAEEEVEWIGLGARDSL 228
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II +QI++ V+RKR G T P+R G ++F+A+ QR+G +TSG PS
Sbjct: 267 AGGFPGADIILTQIETKQVARKRVGLVGETKAPVREGCQLFDADGQRIGNVTSGTAGPSA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + VG +++ VR K + + + KMPFV Y+
Sbjct: 327 GKPVSMGYVSADLATVGTQVFAEVRGKMLPMTIEKMPFVPQRYF 370
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + +LQR ++ + FM ++ G+ C ++R+GYTGEDG EISV
Sbjct: 141 EDRALLALQGPKAVNVLQR-LQPAVAEMIFMDVGQYSLLGVDCLISRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + +ALL++E+V+ GLGARDSL
Sbjct: 200 PAEHAKALAQALLAEEEVEWIGLGARDSL 228
>gi|313110641|ref|ZP_07796515.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 39016]
gi|386066377|ref|YP_005981681.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa
NCGM2.S1]
gi|310883017|gb|EFQ41611.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 39016]
gi|348034936|dbj|BAK90296.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa
NCGM2.S1]
Length = 373
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 -----AHLRRHLEGRCSVEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQECYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPNELAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQECYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|414174613|ref|ZP_11429017.1| glycine cleavage system T protein [Afipia broomeae ATCC 49717]
gi|410888442|gb|EKS36245.1| glycine cleavage system T protein [Afipia broomeae ATCC 49717]
Length = 391
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 158/287 (55%), Gaps = 31/287 (10%)
Query: 189 PGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHM 248
P S+ +A +R PL++LH++ GGK+VPFAG+ MPVQY A + HLHTR+ +FDVSHM
Sbjct: 8 PDSAENALKRVPLHELHVARGGKIVPFAGYEMPVQYTA-GVLKEHLHTRASAGLFDVSHM 66
Query: 249 LQTVVTGKH-----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS 303
Q +T K LE++ D+ + G+ + FTN+ GGI DDL+V D
Sbjct: 67 GQITLTAKSGRVEDAARALETLVPQDILAVPHGRQRYAQFTNDAGGILDDLMVAN-FGDH 125
Query: 304 LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD 363
LFLV NA+ + D A R G I +R LIA+QGP + +L +H
Sbjct: 126 LFLVVNAACKTED-----EAHLRRHLSGTCI---IEPLPDRALIALQGPKAVEVLSKHAP 177
Query: 364 LDLSSLYFMTSRPCTIA----GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDV 419
++++ FM + P T+ I C ++R+GYTGEDG EISVP + + ALL+D V
Sbjct: 178 -TIAAMKFMDAGPHTVQISGQAIGCFVSRSGYTGEDGFEISVPAKDAERLATALLADPAV 236
Query: 420 KLAGLGARDSL---------SGDI-TLNTPVPHGSLKLSNDRFKSLG 456
GLGARDSL DI T TPV G+L+ S + + LG
Sbjct: 237 LPIGLGARDSLRLEAGLCLYGHDIDTTTTPV-EGALEWSVQKSRRLG 282
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNA--NDQRVGAITSGCPSPS 74
GGFPGA +I Q ++G R+R G + G P+R G ++ + + +++GA+TSG P+
Sbjct: 286 AGGFPGADVILKQFETGAPRRRVGLRAEGRAPVREGAALYASETSPEKIGAVTSGGFGPT 345
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ + S G ++ VR +R+ ++V+ MPFV + Y
Sbjct: 346 LNAPVAMGYLPTSLSTEGTAVFADVRGQRLPLRVSAMPFVPNGY 389
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA----GIPCTLTRAGYTGEDGVE 523
+R LIA+QGP + +L +H ++++ FM + P T+ I C ++R+GYTGEDG E
Sbjct: 157 DRALIALQGPKAVEVLSKHAP-TIAAMKFMDAGPHTVQISGQAIGCFVSRSGYTGEDGFE 215
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
ISVP + + ALL+D V GLGARDSL
Sbjct: 216 ISVPAKDAERLATALLADPAVLPIGLGARDSL 247
>gi|398380036|ref|ZP_10538154.1| glycine cleavage system T protein [Rhizobium sp. AP16]
gi|397721352|gb|EJK81900.1| glycine cleavage system T protein [Rhizobium sp. AP16]
Length = 378
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 144/242 (59%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A +TPL+ LHLS G +MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q +
Sbjct: 5 AALNKTPLHTLHLSLGARMVPFAGYDMPVQYPA-GVMKEHLWTRASAGLFDVSHMGQVTI 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ GGI DDL++T ++D LF+V
Sbjct: 64 RARSGTYEDAALALESLVPIDILGLAEGRQRYGFFTDDNGGILDDLMITH-MDDYLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NAS ++ D+ + QD +G + L +R LIA+QGP + +L DL+
Sbjct: 123 NASCKEADLKHL---QDH---IGDTCEVTLL---DRALIALQGPRAVAVLAELW-ADLAY 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EISVP ++ I + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVPADKAEDIAKRLLEHPDVQPIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L DL+ + FM R C + + C ++R+GY+GEDG EISVP
Sbjct: 148 DRALIALQGPRAVAVLAELW-ADLAYMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ I + LL DV+ GLGARDSL
Sbjct: 207 ADKAEDIAKRLLEHPDVQPIGLGARDSL 234
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPG++ I +++ +G SR+R G G P+R +++ + + +G TSG PS
Sbjct: 273 AGGFPGSTRILAELDNGASRRRVGLKPEGKAPVRGHAKLYADAEGKTEIGEATSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G ++ VR K + V V +PF+ Y
Sbjct: 333 VESPVAMGYVPVSFAAPGTPIFAEVRGKYLPVTVAALPFITPTY 376
>gi|402487866|ref|ZP_10834681.1| glycine cleavage system aminomethyltransferase T [Rhizobium sp.
CCGE 510]
gi|401813034|gb|EJT05381.1| glycine cleavage system aminomethyltransferase T [Rhizobium sp.
CCGE 510]
Length = 378
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 146/242 (60%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V
Sbjct: 5 AALKKTPLHALHLSRGARMVPFAGYDMPVQYPA-GVMKEHLHTRTEAGLFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G++ + L ES+ D+ L G+ FT++ G I DDL++ L+D LF+V
Sbjct: 64 KAKSGRYEDAALALESLVPVDILGLAEGRQRYGFFTDDSGCILDDLMIAH-LDDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NAS ++ D+ + A +G + L+ R LIA+QGP + +L D+++
Sbjct: 123 NASCKEADLAHLQA------HIGDRCDITLLN---RALIALQGPRAVEVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+P ++ + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPVDKAEDVTMRLLEHPDVQAIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 149 RALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPV 207
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 208 DKAEDVTMRLLEHPDVQAIGLGARDSL 234
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSLKK 77
FPG+ I S++++G +R+R G G P+R +++ + + +G +TSG PS++
Sbjct: 276 FPGSGRILSELENGAARRRVGLKPEGKAPVRGHAKLYADAEGKAEIGEVTSGGFGPSVEG 335
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ +++ G ++ VR K + + V+ +PFV Y
Sbjct: 336 PVAMGYVPVSHATAGTLVYAEVRGKYLPITVSTLPFVTPTY 376
>gi|386058654|ref|YP_005975176.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa M18]
gi|347304960|gb|AEO75074.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa M18]
Length = 373
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 -DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
L +DR + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 AHLRRHLEDRCS-----VEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I + GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFALQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPSELAGLGREVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|218891576|ref|YP_002440443.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa LESB58]
gi|254235451|ref|ZP_04928774.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa C3719]
gi|254240878|ref|ZP_04934200.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 2192]
gi|421153284|ref|ZP_15612837.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa ATCC
14886]
gi|424941706|ref|ZP_18357469.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa
NCMG1179]
gi|451985442|ref|ZP_21933661.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas aeruginosa 18A]
gi|126167382|gb|EAZ52893.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa C3719]
gi|126194256|gb|EAZ58319.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa 2192]
gi|218771802|emb|CAW27579.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa LESB58]
gi|346058152|dbj|GAA18035.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa
NCMG1179]
gi|404523973|gb|EKA34352.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa ATCC
14886]
gi|451756906|emb|CCQ86184.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas aeruginosa 18A]
Length = 373
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 -DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
L +DR + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 AHLRRHLEDRCS-----VEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPSELAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|398826396|ref|ZP_10584641.1| glycine cleavage system T protein [Bradyrhizobium sp. YR681]
gi|398221159|gb|EJN07585.1| glycine cleavage system T protein [Bradyrhizobium sp. YR681]
Length = 382
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 140/239 (58%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
++TPL+ LH+S GGKMVPFAG+ MPVQY A + HLHTR +FDVSHM Q +
Sbjct: 11 KKTPLHGLHVSLGGKMVPFAGYDMPVQYPA-GVLKEHLHTRKLAGLFDVSHMGQLALRPK 69
Query: 254 TGKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + LE + D+ + PG+ + FTN GGI DDL+V D LFLV NA+
Sbjct: 70 SGKLEDAARALERLVPQDIVAIAPGRQRYAQFTNADGGILDDLMVA-NFGDHLFLVVNAA 128
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + A +L D + L+ +R LIA+QGP + ++L + + ++ F
Sbjct: 129 CKDADEAHLRA------NLSGDCIIDQLA--DRALIALQGPKAESVLAKLC-AEAPAMKF 179
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + P +AG+ C ++R+GYTGEDG EISVP + + LL DV GLGARDSL
Sbjct: 180 MDAGPHKVAGLDCFVSRSGYTGEDGFEISVPAADAERLAKTLLESPDVMPIGLGARDSL 238
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAITSGCPSPS 74
TGGFPGA I + +G SR+R G + G P+R G +F +A + +G +TSG PS
Sbjct: 277 TGGFPGADKILAHFDNGASRRRVGLLAQGRAPVREGALLFADSAGGEPIGKVTSGGFGPS 336
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L +AMGY+ + S +G L+ VR + + + V MPFVK+ Y
Sbjct: 337 LNAPVAMGYVPVSRSALGTNLFAEVRGQLLPLTVAAMPFVKNTY 380
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + ++L + + ++ FM + P +AG+ C ++R+GYTGEDG EISVP
Sbjct: 152 DRALIALQGPKAESVLAKLC-AEAPAMKFMDAGPHKVAGLDCFVSRSGYTGEDGFEISVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL DV GLGARDSL
Sbjct: 211 AADAERLAKTLLESPDVMPIGLGARDSL 238
>gi|325275604|ref|ZP_08141506.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51]
gi|324099278|gb|EGB97222.1| glycine cleavage system T protein [Pseudomonas sp. TJI-51]
Length = 374
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 143/234 (61%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPL+ LHL G +MVPFAG++MPVQY + + HLHTR + +FDVSHM Q + G
Sbjct: 7 QKTPLHALHLELGARMVPFAGYAMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQICLRGV 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ LE + D+ +L G +LFT+ GGI DDL+V + +D LFLV NA+ ++ D
Sbjct: 66 DAGKALERLVPVDIVDLPVGMQRYALFTSADGGILDDLMVARLADDELFLVVNAACKEQD 125
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + Q + L ++ F + R L+A+QGP ++ +L R +++ + FM P
Sbjct: 126 LRHL---QQHLEGL-CEVESLF---DSRALLALQGPAAARVLARLAP-EVTGMTFMQFAP 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP E + +LL++ +V GLGARDSL
Sbjct: 178 LRLLGVDCYVSRSGYTGEDGYEISVPVEAALMLARSLLAEPEVAAIGLGARDSL 231
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q + GV+ KR G VP+R G NA ++ +G +TSG PSL
Sbjct: 270 AGGFPGAEQIFAQQRDGVASKRVGLLPKERVPVREGTLTVNAREEVIGRVTSGGFGPSLG 329
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY++ + + E++ +VR K V ++V + PFV YY
Sbjct: 330 GPLAMGYVQSEQAALDSEVFAQVRGKLVPMQVVRTPFVAQRYY 372
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+ R L+A+QGP ++ +L R +++ + FM P + G+ C ++R+GYTGEDG EISV
Sbjct: 144 DSRALLALQGPAAARVLARLAP-EVTGMTFMQFAPLRLLGVDCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + +LL++ +V GLGARDSL
Sbjct: 203 PVEAALMLARSLLAEPEVAAIGLGARDSL 231
>gi|392983997|ref|YP_006482584.1| glycine cleavage system T protein [Pseudomonas aeruginosa DK2]
gi|419753534|ref|ZP_14279938.1| glycine cleavage system T protein [Pseudomonas aeruginosa
PADK2_CF510]
gi|384400656|gb|EIE47015.1| glycine cleavage system T protein [Pseudomonas aeruginosa
PADK2_CF510]
gi|392319502|gb|AFM64882.1| glycine cleavage system T protein [Pseudomonas aeruginosa DK2]
Length = 373
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 -DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
L +DR + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 AHLRRHLEDRCS-----VEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPSELAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|420138249|ref|ZP_14646186.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa CIG1]
gi|421163931|ref|ZP_15622603.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa ATCC
25324]
gi|403249013|gb|EJY62532.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa CIG1]
gi|404526936|gb|EKA37121.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa ATCC
25324]
Length = 373
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 -DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
L +DR + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 AHLRRHLEDRCS-----VEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGWAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPSELAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|254445973|ref|ZP_05059449.1| glycine cleavage system T protein [Verrucomicrobiae bacterium
DG1235]
gi|198260281|gb|EDY84589.1| glycine cleavage system T protein [Verrucomicrobiae bacterium
DG1235]
Length = 367
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 134/240 (55%), Gaps = 11/240 (4%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S +RTPLYD ++++GG+MV FAG+ MPVQY SI H TR+ +FDVSHM + V
Sbjct: 2 SDAKRTPLYDFNVANGGRMVDFAGWEMPVQY--ESIVEEHKATRTAAGLFDVSHMGEVTV 59
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G E +L + DV +D GK SL GG+ DDL+V + E S L NA+
Sbjct: 60 KGPQSEAFLNYVLTNDVSTMDDGKALYSLMCQPDGGVVDDLLVYRMAEGSYLLCLNAANA 119
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ + F+ D+ +E+ GL+A+QGP + IL+ + +DLS L +
Sbjct: 120 VKDVAWLEKEAANFEVELVDV------SEKYGLVALQGPKAFPILKGLSSVDLSGLGYYR 173
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
IAGI C ++R GYTGE GVE+ V E+ + EAL + + LAGLGARDSL
Sbjct: 174 FVQGEIAGISCIISRTGYTGEVGVELFVAAEKTAELAEALFDAGKADGLVLAGLGARDSL 233
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+ GL+A+QGP + IL+ + +DLS L + IAGI C ++R GYTGE GVE+ V
Sbjct: 142 EKYGLVALQGPKAFPILKGLSSVDLSGLGYYRFVQGEIAGISCIISRTGYTGEVGVELFV 201
Query: 527 PGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
E+ + EAL + + LAGLGARDSL
Sbjct: 202 AAEKTAELAEALFDAGKADGLVLAGLGARDSL 233
>gi|343514277|ref|ZP_08751357.1| glycine cleavage system protein T2 [Vibrio sp. N418]
gi|342800589|gb|EGU36107.1| glycine cleavage system protein T2 [Vibrio sp. N418]
Length = 372
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 144/232 (62%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+DLHL G KMVPFAG+ MPVQY + + HLHTR + +FDVSHM Q + G
Sbjct: 8 TPLHDLHLEAGAKMVPFAGYDMPVQY-KLGVKKEHLHTREQAGLFDVSHMGQLRLKGVDA 66
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+LE++ D+ +L G + FTN QGGI DDL+V L D LF+V NA+ + D+
Sbjct: 67 AAFLETLVPVDIIDLPVGNQRYAFFTNAQGGIMDDLMVAN-LGDHLFVVVNAACKTQDIT 125
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ QD L + + L+ + E+R L+A+QGP + +LQR ++ + FM +
Sbjct: 126 HL---QDH---LPQGVELEVI--EDRALLALQGPKAVNVLQR-LQPAVAEMIFMDVGQYS 176
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EISVP E + +ALL++++V+ GLGARDSL
Sbjct: 177 LLDVDCIISRSGYTGEDGYEISVPAEHAKALAQALLAEQEVEWIGLGARDSL 228
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA I+ +QI++ V+RKR G T P+R G E+F+A+ QR+G +TSG P+
Sbjct: 267 AGGFPGADIVLTQIETKQVARKRVGLVGETKAPVREGCELFDADGQRIGNVTSGTAGPTA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ + VG +++ VR K + + + KMPFV Y+
Sbjct: 327 GKPVSMGYVSADLATVGTQVFAEVRGKMLPMTIEKMPFVPQRYF 370
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + +LQR ++ + FM ++ + C ++R+GYTGEDG EISV
Sbjct: 141 EDRALLALQGPKAVNVLQR-LQPAVAEMIFMDVGQYSLLDVDCIISRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + +ALL++++V+ GLGARDSL
Sbjct: 200 PAEHAKALAQALLAEQEVEWIGLGARDSL 228
>gi|414167538|ref|ZP_11423766.1| glycine cleavage system T protein [Afipia clevelandensis ATCC
49720]
gi|410889870|gb|EKS37671.1| glycine cleavage system T protein [Afipia clevelandensis ATCC
49720]
Length = 385
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 159/277 (57%), Gaps = 27/277 (9%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV- 253
A +R PL+DLH++ GGK+VPFAG+ MPVQY A + HLHTR+ +FDVSHM Q V+
Sbjct: 12 ALKRVPLHDLHVARGGKIVPFAGYEMPVQY-AAGVLKEHLHTRASAGLFDVSHMGQIVLR 70
Query: 254 --TGKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
+GK + LE + D+ + PG+ + FTN+ GGI DDL+V D LFLV N
Sbjct: 71 PKSGKVEDAARALEQLVPQDIVAVAPGRQRYAQFTNDGGGILDDLMVAN-FGDHLFLVVN 129
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A+ + D A R K L ++ L+ +R LIA+QG ++ +L + ++++
Sbjct: 130 AACKTED-----EAHLR-KHLSDTCVIEPLT--DRALIALQGRKAAEVLAKLAP-SVTTM 180
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FM + P + GI C ++R+GYTGEDG EISVP + + ALL+D V GLGARDS
Sbjct: 181 KFMDAGPHAVLGIACFVSRSGYTGEDGFEISVPAKDAERLATALLADPAVLPIGLGARDS 240
Query: 430 L---------SGDI-TLNTPVPHGSLKLSNDRFKSLG 456
L DI T TPV G+L+ S + + G
Sbjct: 241 LRLEAGLCLYGHDIDTTTTPV-EGALEWSVQKSRRTG 276
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QG ++ +L + ++++ FM + P + GI C ++R+GYTGEDG EISVP
Sbjct: 155 DRALIALQGRKAAEVLAKLAP-SVTTMKFMDAGPHAVLGIACFVSRSGYTGEDGFEISVP 213
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + ALL+D V GLGARDSL
Sbjct: 214 AKDAERLATALLADPAVLPIGLGARDSL 241
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNA--NDQRVGAITSGCPSPS 74
GGFPGA II Q +G SR+R G + G P+R + + + ++G +TSG P+
Sbjct: 280 AGGFPGADIILKQFDTGASRRRVGLRAEGRAPVREHAALHASETSSDKIGTVTSGGFGPT 339
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
L +AMGY+ + S G ++ VR +R+ ++V+ MPFV +
Sbjct: 340 LNAPVAMGYLPTSLSTEGTIVFADVRGQRLPLRVSAMPFVPNG 382
>gi|398999610|ref|ZP_10702345.1| glycine cleavage system T protein [Pseudomonas sp. GM18]
gi|398131232|gb|EJM20551.1| glycine cleavage system T protein [Pseudomonas sp. GM18]
Length = 374
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 144/239 (60%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LHL G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHLELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTNE GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNEAGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGDQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFTRVKLLGVDCFVSRSGYTGEDGYEISVPTANAEALARALLAEPEVAAIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+ +G++ SG P+L +AMGY++ AY+ + +W VR K+V + V+KMPFV
Sbjct: 311 EAGEIIGSVCSGGFGPTLGGPLAMGYLDSAYTVLETPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFTRVKLLGVDCFVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PTANAEALARALLAEPEVAAIGLGARDSL 231
>gi|262164342|ref|ZP_06032080.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
mimicus VM223]
gi|262026722|gb|EEY45389.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
mimicus VM223]
Length = 376
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 140/232 (60%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ ++ D+
Sbjct: 70 AAALEALVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKEQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVANMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++++ FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVANMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|242768125|ref|XP_002341508.1| glycine cleavage system T protein [Talaromyces stipitatus ATCC
10500]
gi|218724704|gb|EED24121.1| glycine cleavage system T protein [Talaromyces stipitatus ATCC
10500]
Length = 485
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 141/257 (54%), Gaps = 23/257 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
RT LYDLHL + KMVPFAGF MP+QY +S T SH TR K S+FDVSHM+Q +TG
Sbjct: 74 NRTQLYDLHLKYAAKMVPFAGFDMPLQYSDLSHTESHHWTREKSSLFDVSHMVQHRLTGP 133
Query: 257 HREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
L + + + +L TLS L + GGI DD ++T+ +S + V+NA RR+
Sbjct: 134 GALPLLMKVTPSSLDKLANNTSTLSCLLEDGTGGIIDDTVITRQGPESFYFVTNAGRREE 193
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRH---------TDLDL 366
D+ + A D +++ +++ +R LIA+QGPLS +ILQ + DL
Sbjct: 194 DLVFLTAEIDAYRAEHGADSIKWEILNDRALIALQGPLSQSILQSYIYTGEGEDVASTDL 253
Query: 367 SSLYFMTSRPCTI-------AGIPCTLTRAGYTGEDGVEISVPGEQCT-----HIVEALL 414
++LYF SR + ++R GYTGEDG EIS+P + E LL
Sbjct: 254 NTLYFGQSRELYLQFPDGSKTAHRLLISRTGYTGEDGFEISIPTSNGATTLPHQVTELLL 313
Query: 415 SDED-VKLAGLGARDSL 430
S D +LAGL ARDSL
Sbjct: 314 SQPDKCRLAGLAARDSL 330
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 16/126 (12%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS--GVSRKRTGFT-STGVPIRPGYEIFNAND---- 60
GK RR+ + F G+S+I +Q+ S + ++R G T G P R G I + N
Sbjct: 359 GKDRRDQNSPSSKFNGSSVILAQLASPKTLPQRRIGLTIEKGAPAREGAIIVDPNSITEE 418
Query: 61 ----QRVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
++G +TSG PSPSL NIAMGYI+ K G E+ V VR+K VT MP+++
Sbjct: 419 NKTPTQIGIVTSGLPSPSLGGTNIAMGYIKNGLHKKGTEVAVLVRNKLRKATVTPMPWIE 478
Query: 116 SNYYTP 121
S ++ P
Sbjct: 479 SKFHRP 484
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 22/111 (19%)
Query: 467 EERGLIAVQGPLSSTILQRH---------TDLDLSSLYFMTSRPCTI-------AGIPCT 510
+R LIA+QGPLS +ILQ + DL++LYF SR +
Sbjct: 220 NDRALIALQGPLSQSILQSYIYTGEGEDVASTDLNTLYFGQSRELYLQFPDGSKTAHRLL 279
Query: 511 LTRAGYTGEDGVEISVPGEQCT-----HIVEALLSDED-VKLAGLGARDSL 555
++R GYTGEDG EIS+P + E LLS D +LAGL ARDSL
Sbjct: 280 ISRTGYTGEDGFEISIPTSNGATTLPHQVTELLLSQPDKCRLAGLAARDSL 330
>gi|116050390|ref|YP_790793.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|355652043|ref|ZP_09056592.1| glycine cleavage system T protein [Pseudomonas sp. 2_1_26]
gi|421171394|ref|ZP_15629258.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa ATCC
700888]
gi|421174420|ref|ZP_15632143.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa CI27]
gi|115585611|gb|ABJ11626.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|354824487|gb|EHF08734.1| glycine cleavage system T protein [Pseudomonas sp. 2_1_26]
gi|404520202|gb|EKA30890.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa ATCC
700888]
gi|404534158|gb|EKA43914.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa CI27]
Length = 373
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 -----AHLRRHLEGRCSVEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPNELAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|424870806|ref|ZP_18294468.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393166507|gb|EJC66554.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 378
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 146/242 (60%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V
Sbjct: 5 AALKKTPLHALHLSLGARMVPFAGYDMPVQYPA-GVMKEHLHTRTEAGLFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ G I DDL++T L+D LF+V
Sbjct: 64 KAKSGSYEDAALALESLVPVDILGLAEGRQRYGFFTDDTGCILDDLMITH-LDDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ ++ D+ + A +G + L +R LIA+QGP + +L D+++
Sbjct: 123 NAACKEADIAHLKA------HIGDQCDITVL---DRALIALQGPRAVEVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+P ++ + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPSDKAVDVTMRLLEHPDVQAIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 148 DRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 207 SDKAVDVTMRLLEHPDVQAIGLGARDSL 234
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPS 74
GGFPG+ I S++++G +R+R G G P+R +++ + +V G +TSG PS
Sbjct: 273 AGGFPGSGRILSELENGAARRRVGLKPEGKAPVRGHAKLYADAEGKVEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G ++ VR K + + V+ +PFV Y
Sbjct: 333 VEGPVAMGYVPLSHAAAGTLVYAEVRGKYLPITVSALPFVTPTY 376
>gi|156848479|ref|XP_001647121.1| hypothetical protein Kpol_1036p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156117805|gb|EDO19263.1| hypothetical protein Kpol_1036p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 394
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 139/243 (57%), Gaps = 8/243 (3%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S +A ++T L+DLH+ G KMVPFAG+SMP+ Y + SHL TRS +FDVSHMLQ
Sbjct: 10 NSTTALKKTALHDLHVELGAKMVPFAGYSMPLLYDGQTHIESHLWTRSNAGLFDVSHMLQ 69
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ ++GK ++L + + L GTLS+ N GGI DD ++TK ++ ++V+NA
Sbjct: 70 SRLSGKEAMDFLHRVTPTEYKGLQSNNGTLSVLLNSTGGIVDDTMITKINDEEFYIVTNA 129
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ--RHTDLDLSS 368
+ D++ + +++ ++ G + + R L+A+QGP + +LQ L
Sbjct: 130 GCVERDLEFI---KEQLETSGYNCSWDVIQG--RSLLALQGPEAHKVLQPLLREGQPLKE 184
Query: 369 LYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
LYF RP +A + + R+GYTGEDG EISVP E + LL + K GL AR
Sbjct: 185 LYFGQRRPFELANNVTIDVARSGYTGEDGFEISVPNENALEFAQQLLDNNITKPIGLAAR 244
Query: 428 DSL 430
DSL
Sbjct: 245 DSL 247
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 469 RGLIAVQGPLSSTILQ--RHTDLDLSSLYFMTSRPCTIAG-IPCTLTRAGYTGEDGVEIS 525
R L+A+QGP + +LQ L LYF RP +A + + R+GYTGEDG EIS
Sbjct: 158 RSLLALQGPEAHKVLQPLLREGQPLKELYFGQRRPFELANNVTIDVARSGYTGEDGFEIS 217
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
VP E + LL + K GL ARDSL
Sbjct: 218 VPNENALEFAQQLLDNNITKPIGLAARDSL 247
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 21 FPGASIIQSQIKSGVSRK-RTGF--TSTGVPIRPGYEIFNANDQ-RVGAITSGCPSPSLK 76
F G I Q+ + K R F T G R G +IF + VG +TSG SPSL
Sbjct: 289 FNGYEKIMDQVNNKTHDKLRISFKYTGKGPAARTGSKIFLPDKTTEVGVVTSGSASPSLN 348
Query: 77 K-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
NI GY+ K G EL V+VR+K + ++K P V S+YY P
Sbjct: 349 NLNIGQGYVTKGQHKSGTELLVQVRNKFFPIVLSKSPLVPSHYYRP 394
>gi|107101893|ref|ZP_01365811.1| hypothetical protein PaerPA_01002938 [Pseudomonas aeruginosa PACS2]
gi|416865965|ref|ZP_11915841.1| glycine cleavage system T protein [Pseudomonas aeruginosa 138244]
gi|334834195|gb|EGM13182.1| glycine cleavage system T protein [Pseudomonas aeruginosa 138244]
gi|453042550|gb|EME90291.1| glycine cleavage system T protein [Pseudomonas aeruginosa
PA21_ST175]
Length = 373
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 -----AHLRRHLEGRCSVEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPSELAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|448533456|ref|XP_003870643.1| hypothetical protein CORT_0F02900 [Candida orthopsilosis Co 90-125]
gi|380354998|emb|CCG24514.1| hypothetical protein CORT_0F02900 [Candida orthopsilosis]
Length = 397
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 143/250 (57%), Gaps = 17/250 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S S +TPLY+ H+ GGKMVP+AGF MPV Y + S SH RSK +FDVSHMLQ
Sbjct: 14 ASTSTLLKTPLYEAHVELGGKMVPYAGFEMPVLYESQSHIDSHNWVRSKAGLFDVSHMLQ 73
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ G + +LE + D++ + +LS+ N+ GG+ DD I+TK +D ++V+NA
Sbjct: 74 HNIRGPDAQSFLEKVTPIDLNLIPENSSSLSVLLNKDGGVIDDCIITKHGKDEYYMVTNA 133
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R+ D+ + +D K+ H F E L+A+QGP + +LQ+ T+ DLS +Y
Sbjct: 134 GCREKDVQFL---KDELKAFNNVQHNTF----EGTLLAIQGPKAQELLQKFTNEDLSKIY 186
Query: 371 FMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVPGEQCTHIVEAL-----LSDE--DV-K 420
F ++ ++ I T L R+GYTGEDG E+S+P EAL L E DV K
Sbjct: 187 FGQTKFIKLSPISATVHLARSGYTGEDGFELSIPSATSEEATEALAFFNTLVHEYPDVAK 246
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 247 PIGLAARDSL 256
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 13 KRRRE--TGGFPGASIIQSQIKS-GVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGAITS 68
K RRE F GA+ I SQIK+ + +R G TS G R G ++F+ + + +G ITS
Sbjct: 286 KTRRELIDSSFNGAAKILSQIKNKSTTHRRIGLTSKGPSPREGNKVFSEDGKSEIGYITS 345
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G PSP+ N+A YI+ SK+G + + +R K D VTK+PFV S Y
Sbjct: 346 GSPSPTNGGNVAQAYIDKK-SKIGAPVKIEIRGKLRDGVVTKLPFVPSRLY 395
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 62/116 (53%), Gaps = 14/116 (12%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
D K+ H F E L+A+QGP + +LQ+ T+ DLS +YF ++ ++ I
Sbjct: 145 DELKAFNNVQHNTF----EGTLLAIQGPKAQELLQKFTNEDLSKIYFGQTKFIKLSPISA 200
Query: 510 T--LTRAGYTGEDGVEISVPGEQCTHIVEAL-----LSDE--DV-KLAGLGARDSL 555
T L R+GYTGEDG E+S+P EAL L E DV K GL ARDSL
Sbjct: 201 TVHLARSGYTGEDGFELSIPSATSEEATEALAFFNTLVHEYPDVAKPIGLAARDSL 256
>gi|296389147|ref|ZP_06878622.1| glycine cleavage system T protein [Pseudomonas aeruginosa PAb1]
gi|416887139|ref|ZP_11922707.1| glycine cleavage system T protein [Pseudomonas aeruginosa 152504]
gi|334833278|gb|EGM12409.1| glycine cleavage system T protein [Pseudomonas aeruginosa 152504]
Length = 373
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 -----AHLRRHLEGRCSVEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPNELAGLGSEVTAMVRGKPVTLVVSKMPFVTQRYY 371
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|440473936|gb|ELQ42705.1| hypothetical protein OOU_Y34scaffold00194g17 [Magnaporthe oryzae
Y34]
Length = 919
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 146/252 (57%), Gaps = 18/252 (7%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
GSS +T LYDLH++HGGKMVPFAG+ MPVQY ++S++ASH+ TR K S+FDV HM+
Sbjct: 545 GSSGEVLHKTALYDLHVAHGGKMVPFAGYHMPVQYSSLSVSASHVFTREKASLFDVGHMV 604
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTL-SLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
Q +G +LE + + V L P G+L +L GGI DD IVT+ ++ ++V+
Sbjct: 605 QRRFSGPGAAAFLERVTPSGVAALKPHHGSLTTLLHRGTGGIVDDTIVTRLDDELFYVVT 664
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRH----TDL 364
NA R D D A + G + + + GL+A+QGPL+ IL ++
Sbjct: 665 NAGCR--DKDNKYFADELAAWDGATVKHEVMDG--WGLVALQGPLAKDILAEALAEPAEV 720
Query: 365 DLSSLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD-- 416
DL +L+F SR I P ++R GYTGEDG EIS+P ++ + +ALL+
Sbjct: 721 DLPNLHFGMSRYGRIKLLGMEVSAPLLISRGGYTGEDGFEISIPEDETVAVTQALLTTGR 780
Query: 417 -EDVKLAGLGAR 427
E ++LAGLG +
Sbjct: 781 PERLQLAGLGGQ 792
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 7/112 (6%)
Query: 15 RRETGGFPGASIIQSQIKS------GVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGAIT 67
RRET GF GA +I Q+ + GV R+R G G P R G +I +++ ++G IT
Sbjct: 805 RRETAGFHGAEVILPQLVAKSKGGKGVERRRVGLVVEGAPAREGADIVSSDGATKLGKIT 864
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SGCPSP+L KNIAMGYI+ K G E+ V VR K VTKMPF+++ Y+
Sbjct: 865 SGCPSPTLGKNIAMGYIQDGQHKAGTEVAVLVRGKPRKAVVTKMPFIQTKYW 916
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 470 GLIAVQGPLSSTILQRH----TDLDLSSLYFMTSRPCTI------AGIPCTLTRAGYTGE 519
GL+A+QGPL+ IL ++DL +L+F SR I P ++R GYTGE
Sbjct: 697 GLVALQGPLAKDILAEALAEPAEVDLPNLHFGMSRYGRIKLLGMEVSAPLLISRGGYTGE 756
Query: 520 DGVEISVPGEQCTHIVEALLSD---EDVKLAGLGAR 552
DG EIS+P ++ + +ALL+ E ++LAGLG +
Sbjct: 757 DGFEISIPEDETVAVTQALLTTGRPERLQLAGLGGQ 792
>gi|225561296|gb|EEH09576.1| aminomethyltransferase [Ajellomyces capsulatus G186AR]
Length = 491
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 182/347 (52%), Gaps = 38/347 (10%)
Query: 107 KVTKMPFVKSNYYTPPKIRKVKKKGDEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNY 166
K +P+++ YT P IR G P S+ +L + +++PF
Sbjct: 11 KWAALPWLRP-VYTTPAIRL--GNGCRPLSSRALGQLTIPAEAS----SRSRVPF----- 58
Query: 167 HTPPKYFLKFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGA 226
H+ YFL L S ++ ++T L+DLH++H +M PFAGFSMP+ Y
Sbjct: 59 HSSANYFLHHTFLSRNLA---SSSTAVLTLKKTQLHDLHIAHKARMSPFAGFSMPLVYSD 115
Query: 227 VSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE 286
+S T SH TR+K S+FDVSHM+Q ++G + L + + ++ L + TLS F +E
Sbjct: 116 LSHTESHNWTRNKASLFDVSHMVQHHISGPGALDLLLKVTPSSLNLLQINRSTLSCFLDE 175
Query: 287 Q-GGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFK-SLGKDIHLQFLS---A 341
+ GGI DD ++T+ +S + V+NA RRK D+D + + F+ G H +S
Sbjct: 176 ETGGIIDDTVITRLGPESFYFVTNAGRRKEDLDFLHKEIENFRWRHGSSAHKSIISWSVL 235
Query: 342 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--T 387
+ L+A+QGPLS++ILQ T+ DLS+L+F R + P L +
Sbjct: 236 DNHALVALQGPLSASILQSLITTDEAGTNSDLSTLHFCQCRFLHLNFPDGTHTPSHLLIS 295
Query: 388 RAGYTGEDGVEISVPG----EQCTHIVEALLSDEDVKLAGLGARDSL 430
R GYTGEDG EIS+P + + + LLS+ V+LAGL ARDSL
Sbjct: 296 RTGYTGEDGFEISIPTDIDPQLPMKVSQLLLSNPSVRLAGLAARDSL 342
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAND--Q 61
GK RR+ + F GAS+I Q+ S ++ +R G TG P R I + D
Sbjct: 371 GKDRRDPSSPSSAFNGASVILPQLTSPTKTLTERRIGLVIETGPPARKDAPIIDMADGST 430
Query: 62 RVGAITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++G +TSG PSP+L N+AMGY++ + K G E+ V VR K V PFV + +Y
Sbjct: 431 QIGMVTSGLPSPTLGGVNVAMGYVKQGFHKKGTEVGVLVRKKVHKATVVSTPFVPTKFY 489
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 18/107 (16%)
Query: 467 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--T 512
+ L+A+QGPLS++ILQ T+ DLS+L+F R + P L +
Sbjct: 236 DNHALVALQGPLSASILQSLITTDEAGTNSDLSTLHFCQCRFLHLNFPDGTHTPSHLLIS 295
Query: 513 RAGYTGEDGVEISVPG----EQCTHIVEALLSDEDVKLAGLGARDSL 555
R GYTGEDG EIS+P + + + LLS+ V+LAGL ARDSL
Sbjct: 296 RTGYTGEDGFEISIPTDIDPQLPMKVSQLLLSNPSVRLAGLAARDSL 342
>gi|331006917|ref|ZP_08330162.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma
proteobacterium IMCC1989]
gi|330419237|gb|EGG93658.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma
proteobacterium IMCC1989]
Length = 378
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 136/238 (57%), Gaps = 15/238 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q TPL+ LH G KMVPFAG+ MPVQ+ A + HLHTR + +FDVSHM Q V+G
Sbjct: 9 QVTPLHALHNELGAKMVPFAGYDMPVQFPA-GVKTEHLHTRKEAGLFDVSHMGQLTVSGD 67
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E LE + DV LD + + +L TN+ GGI DDLI+T+ ED+ F+V NA+ ++ D
Sbjct: 68 GIVEALEKLLPIDVGALDIHQQSYALLTNDDGGILDDLIITRWAEDTFFIVVNAACKEQD 127
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM---- 372
+ F+ + ++ LS+ R L+A+QGP + + + + L FM
Sbjct: 128 I-------AHFRKHLPNATIEILSS--RALVALQGPSAKNVAEVIAPI-ACELTFMHGCF 177
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ C + C TR+GYTGEDG EIS+P E + LLS + V+ GLGARDSL
Sbjct: 178 VTVDCNGTAVECYFTRSGYTGEDGFEISIPNEHADAVARLLLSFDCVEAIGLGARDSL 235
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN 57
I + LL K RR + GGF G I S I+ G RKR G G P+R G + +
Sbjct: 255 IDASLLWSISKSRRPDGAKAGGFLGTDNIFSSIEKGSDRKRVGLLIDGRAPVREGAVLVD 314
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
A+D VG +TSG PS+ K IA+GY + +G EL+ VR K++ V V+KMPFV+
Sbjct: 315 ADDNTVGVVTSGGFGPSINKPIAIGYANKTSAALGTELFALVRGKKLPVSVSKMPFVEQR 374
Query: 118 YY 119
Y+
Sbjct: 375 YF 376
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFM----TSRPCTIAGIPCTLTRAGYTGEDGVEI 524
R L+A+QGP + + + + L FM + C + C TR+GYTGEDG EI
Sbjct: 146 RALVALQGPSAKNVAEVIAPI-ACELTFMHGCFVTVDCNGTAVECYFTRSGYTGEDGFEI 204
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S+P E + LLS + V+ GLGARDSL
Sbjct: 205 SIPNEHADAVARLLLSFDCVEAIGLGARDSL 235
>gi|358340215|dbj|GAA48159.1| aminomethyltransferase [Clonorchis sinensis]
Length = 483
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 134/234 (57%), Gaps = 12/234 (5%)
Query: 207 SHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESIC 266
+HG KMV F GFS+P+QY +I SH + R +FDVSHMLQ + G R ++ES+
Sbjct: 66 NHGAKMVDFCGFSLPIQYAQQNIIDSHNYVRKNCGIFDVSHMLQVRIHGADRLYFMESMT 125
Query: 267 VADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDR 326
+D+ L G GTLS++ + GGI DDLI+ K E L++VSNA+ + + Q
Sbjct: 126 SSDLLNLPIGTGTLSVYLKDDGGILDDLIINKCTEPYLYVVSNAACAEKITSHLKMKQIE 185
Query: 327 FKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD----LSSLYFMTSRPC-TIAG 381
F GKD ++FL L+AVQGP S IL+++T + L +LYFM S ++ G
Sbjct: 186 FSKSGKDATIEFLG--RYALLAVQGPESYNILRQNTVTEGQRILDNLYFMESSIIPSLFG 243
Query: 382 I-----PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ P +TR GYTGEDG EISVP + + ++ VK GL ARD+L
Sbjct: 244 LNDSSDPIRITRCGYTGEDGYEISVPAKLALELANRMMETRRVKPVGLAARDTL 297
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 12 GKRRRETGG---FPGASIIQSQIK--SGVSRKRTGFTS-TGVPIRPGYEIFNAN-DQRVG 64
GKRRR+ PG I +Q+K + VS +R G TG RPG +IF+ D VG
Sbjct: 326 GKRRRQASSDPPIPGGKKILAQLKDKAQVSERRIGIAGGTGPQARPGAKIFSDRIDGPVG 385
Query: 65 AITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSGC SP+L +NIAM Y++ ++ G L V +R K VT +PFV + Y
Sbjct: 386 RVTSGCLSPTLGRNIAMAYVKSEFTNPGENLHVEIRQKLYPFTVTSLPFVPNRY 439
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLD----LSSLYFMTSR 500
LK+ F GKD ++FL L+AVQGP S IL+++T + L +LYFM S
Sbjct: 179 LKMKQIEFSKSGKDATIEFLG--RYALLAVQGPESYNILRQNTVTEGQRILDNLYFMESS 236
Query: 501 PC-TIAGI-----PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 554
++ G+ P +TR GYTGEDG EISVP + + ++ VK GL ARD+
Sbjct: 237 IIPSLFGLNDSSDPIRITRCGYTGEDGYEISVPAKLALELANRMMETRRVKPVGLAARDT 296
Query: 555 L 555
L
Sbjct: 297 L 297
>gi|224006530|ref|XP_002292225.1| glycine decarboxylase t-protein [Thalassiosira pseudonana CCMP1335]
gi|220971867|gb|EED90200.1| glycine decarboxylase t-protein [Thalassiosira pseudonana CCMP1335]
Length = 418
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 138/240 (57%), Gaps = 12/240 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVS--ITASHLHTRS--KVSVFDVSHMLQTVV 253
+T LY+LH GG MVPFAG+ +PV Y + + HL RS K S+FDVSHM Q
Sbjct: 38 KTSLYNLHKELGGDMVPFAGYELPVLYKGDNGGVMKEHLWCRSDGKASLFDVSHMGQIRW 97
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G+ R +LE I V D+ L G G LSL TN GGI DD ++T D +++V N + +
Sbjct: 98 RGRDRAAFLEKIVVGDIAGLSEGSGCLSLVTNVNGGIIDDTVITNA-GDYIYMVVNGATK 156
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT--DLDLSSLYF 371
DM +++ +S D+++++L + L+A+QGP ++ + + DL+ + F
Sbjct: 157 FGDMKHF---KEQMESFDGDVNMEYLE-DSMQLLAIQGPGAAEAVSKLLPGAFDLTKMAF 212
Query: 372 MTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
MT T+ G+ C +TR GYTGEDG EI++P E I LLSD V GLGARDSL
Sbjct: 213 MTGVDTTLDGVDGCRITRCGYTGEDGFEIAMPAEHAVSIASKLLSDPSVNPTGLGARDSL 272
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 11 PGKRRRETGGFPGAS-IIQSQIK-SGVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGAIT 67
P RRR GGF GA I++ K V+RKR G P R EIF+AN + ++G +T
Sbjct: 303 PKSRRRTEGGFLGAEHILKPDGKFQKVARKRVGIKGMKAPAREHAEIFDANGETKIGEVT 362
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SG SP LK IAMGY+E +K G E+ V++R K ++ +MPFV+S YY P+
Sbjct: 363 SGTFSPCLKAPIAMGYVETELAKAGTEVNVQIRGKMQKAEIVRMPFVESRYYRIPE 418
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 434 ITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHT--DLDL 491
+ +N G +K ++ +S D+++++L + L+A+QGP ++ + + DL
Sbjct: 149 MVVNGATKFGDMKHFKEQMESFDGDVNMEYLEDSMQ-LLAIQGPGAAEAVSKLLPGAFDL 207
Query: 492 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 550
+ + FMT T+ G+ C +TR GYTGEDG EI++P E I LLSD V GLG
Sbjct: 208 TKMAFMTGVDTTLDGVDGCRITRCGYTGEDGFEIAMPAEHAVSIASKLLSDPSVNPTGLG 267
Query: 551 ARDSL 555
ARDSL
Sbjct: 268 ARDSL 272
>gi|110678550|ref|YP_681557.1| glycine cleavage system protein T [Roseobacter denitrificans OCh
114]
gi|109454666|gb|ABG30871.1| aminomethyltransferase [Roseobacter denitrificans OCh 114]
Length = 374
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 140/237 (59%), Gaps = 14/237 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+DLH G KMVPFAG+ MPVQY + + HLHTR + +FDVSHM Q +++G
Sbjct: 5 KRTPLFDLHAELGAKMVPFAGYEMPVQY-PMGVMKEHLHTRGRAGLFDVSHMGQVLLSGP 63
Query: 257 HREE---WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ E++ DV L G+ FTN+ GGI+DDL+ ++ D+LF+V NA +
Sbjct: 64 SWDAVALAFEALVPVDVLGLADGRQRYGFFTNDAGGIEDDLMFSRR-GDALFVVINAGCK 122
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ LM A L DI L LS +R L+A+QGP + +++ D +++ FM
Sbjct: 123 DADLALMRA------GLPDDITLTELS--DRALLALQGPAAGSVIA-SLDARAAAMRFMD 173
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ ++ G +R+GYTGEDG EISV ++ + + L+ D +V GLGARDSL
Sbjct: 174 TCELSLCGHTVWASRSGYTGEDGFEISVHADEAVALAQRLVEDAEVAPIGLGARDSL 230
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAIT 67
PG R GGFPG+ I +I G + KR G G P+R G +F + + ++G++T
Sbjct: 264 PGGAR--AGGFPGSKAIFDEIAQGPATKRVGLRPEGRAPMRQGVALFASAEGGAQIGSVT 321
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SG PS++ +AMGY++ ++ G LW VR KR+ +KV +PFV + +
Sbjct: 322 SGGFGPSVQGPVAMGYVDTDFATTGTALWGEVRSKRMGLKVVDLPFVPAGF 372
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
DI L LS +R L+A+QGP + +++ D +++ FM + ++ G +R+GYT
Sbjct: 136 DITLTELS--DRALLALQGPAAGSVIA-SLDARAAAMRFMDTCELSLCGHTVWASRSGYT 192
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EISV ++ + + L+ D +V GLGARDSL
Sbjct: 193 GEDGFEISVHADEAVALAQRLVEDAEVAPIGLGARDSL 230
>gi|254472053|ref|ZP_05085454.1| glycine cleavage system T protein [Pseudovibrio sp. JE062]
gi|374329925|ref|YP_005080109.1| glycine cleavage system T protein [Pseudovibrio sp. FO-BEG1]
gi|211959255|gb|EEA94454.1| glycine cleavage system T protein [Pseudovibrio sp. JE062]
gi|359342713|gb|AEV36087.1| glycine cleavage system T protein [Pseudovibrio sp. FO-BEG1]
Length = 380
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 142/240 (59%), Gaps = 17/240 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+DLH G KMVPFAG+ MPVQY + + HL TR +FDVSHM Q + G
Sbjct: 9 KTPLFDLHTELGAKMVPFAGYDMPVQY-PLGVMKEHLFTRESAGLFDVSHMGQAWLVGPD 67
Query: 258 RE---EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTL--EDS--LFLVSNA 310
LE++ +++ EL PGK ++ N+ G I DDL+V++ L ED L LV NA
Sbjct: 68 HATTAAALETLVPSNMKELKPGKQRYTVLLNDNGCIIDDLMVSRPLAAEDDGRLMLVVNA 127
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ + D ++ AA L ++ L+ + E+R LIA+QGP ++ ++ H + + +
Sbjct: 128 ACKDNDYKIIAAA------LPDNVKLEIV--EDRALIAIQGPKAAEVMALHAP-EAAEMG 178
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM +RP GI +R+GYTGEDG EIS+P + +ALL+DE V+ GLGARDSL
Sbjct: 179 FMEARPLEFDGISVIASRSGYTGEDGYEISIPAGAAEAVAKALLADERVEPIGLGARDSL 238
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEI-FNANDQRVGAITSGC 70
KRR+E G FPG + Q+ G R G G P R G EI +++ +G +TSG
Sbjct: 268 KRRKEAGDFPGGERVLKQLAEGTENLRVGLLLDGRAPAREGAEIRVPGSEEVIGRVTSGG 327
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
P+L +AMGY+ +++G E+ + VR + + KV +MPFV YY PK
Sbjct: 328 FGPTLGAPVAMGYVPSKLAEIGTEVELVVRGRALKAKVAEMPFVAQRYYRKPK 380
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L ++ L+ + E+R LIA+QGP ++ ++ H + + + FM +RP GI +R
Sbjct: 140 ALPDNVKLEIV--EDRALIAIQGPKAAEVMALHAP-EAAEMGFMEARPLEFDGISVIASR 196
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EIS+P + +ALL+DE V+ GLGARDSL
Sbjct: 197 SGYTGEDGYEISIPAGAAEAVAKALLADERVEPIGLGARDSL 238
>gi|405382863|ref|ZP_11036639.1| glycine cleavage system T protein [Rhizobium sp. CF142]
gi|397320624|gb|EJJ25056.1| glycine cleavage system T protein [Rhizobium sp. CF142]
Length = 378
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 144/242 (59%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q ++
Sbjct: 5 AALKKTPLHALHLSLGARMVPFAGYDMPVQYPA-GVMKEHLQTRTAAGLFDVSHMGQVII 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+GK+ + L ES+ D+ L G+ FT+E GGI DDL++T L+D LF+V
Sbjct: 64 KAKSGKYEDAALALESLVPVDILGLAEGRQRYGFFTDENGGILDDLMITH-LDDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ ++ D+ + K L + L +R LIA+QGP + L D+++
Sbjct: 123 NAACKEQDIAHLQ------KHLSDTCDITVL---DRALIALQGPRAVEALAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+P ++ + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPADKAVDVTNRLLEHPDVEPIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 148 DRALIALQGPRAVEALAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 207 ADKAVDVTNRLLEHPDVEPIGLGARDSL 234
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA I ++ GVSRKR G G P+R +++ + + +G +TSG PS
Sbjct: 273 AGGFPGAERILGELDKGVSRKRVGLKPEGKAPVRGHAKLYADAEGKTEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ ++S G +++ VR K + + V+ +PF+ Y
Sbjct: 333 VEGPVAMGYVPVSHSAPGTQIYAEVRGKYLPITVSALPFITPTY 376
>gi|294084911|ref|YP_003551671.1| aminomethyltransferase (glycine cleavage system t protein)
[Candidatus Puniceispirillum marinum IMCC1322]
gi|292664486|gb|ADE39587.1| putative aminomethyltransferase (glycine cleavage system t protein)
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 376
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 143/242 (59%), Gaps = 17/242 (7%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ----T 251
++T LYD H++ G +MVPFAG+ MPVQY A I A H+ TR+ +FDVSHM Q +
Sbjct: 3 NRKTALYDFHVAAGARMVPFAGWDMPVQYPA-GIKAEHIATRTTCGLFDVSHMAQISLDS 61
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
V K + L + D+ ++ G+ S+F ++ GG+ DDL++ + L+ L LV+NA
Sbjct: 62 VGDDKAADAMLAQLTPTDLGLINEGRVRYSMFLDDNGGVLDDLMIAR-LDGRLQLVANAG 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR---HTDLDLSS 368
R D+ + A LG+ H++ ++ LIA+QGP ++T+L+ D+D+++
Sbjct: 121 RADHDIAHLKA------HLGE--HVRMTVHDDLSLIALQGPKAATVLEDLGIKLDVDMAN 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
FM R T+ G TLTR+GYTGEDG EIS+P I AL + DV L GLGARD
Sbjct: 173 FAFMDIRHATLMGTKVTLTRSGYTGEDGFEISIPNTAVVEITTALAAHNDVHLVGLGARD 232
Query: 429 SL 430
+L
Sbjct: 233 TL 234
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 460 HLQFLSPEERGLIAVQGPLSSTILQR---HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 516
H++ ++ LIA+QGP ++T+L+ D+D+++ FM R T+ G TLTR+GY
Sbjct: 136 HVRMTVHDDLSLIALQGPKAATVLEDLGIKLDVDMANFAFMDIRHATLMGTKVTLTRSGY 195
Query: 517 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TGEDG EIS+P I AL + DV L GLGARD+L
Sbjct: 196 TGEDGFEISIPNTAVVEITTALAAHNDVHLVGLGARDTL 234
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQ----RVGAIT 67
KRRR+ G FPGA+ I + + +G +RK G G P+R G I D+ +G ++
Sbjct: 264 KRRRDAGDFPGANPILADLNNGPARKLVGLLPEGGRPVRDG-TILKHGDEGDETEIGFVS 322
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SG +PSL A+G++ Y++ G L R K + V +P V +Y
Sbjct: 323 SGGFAPSLDAPAAIGFVSAEYAQSGTHLIADTRGKPTPIIVADLPLVPHQFY 374
>gi|240274390|gb|EER37906.1| aminomethyltransferase [Ajellomyces capsulatus H143]
Length = 491
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 181/347 (52%), Gaps = 38/347 (10%)
Query: 107 KVTKMPFVKSNYYTPPKIRKVKKKGDEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNY 166
K +P+++ YT P IR G P S+ +L + +++P S+
Sbjct: 11 KWAALPWLRP-VYTTPAIRL--GNGCRPLSSRALGQLTIPAEAS----SRSRVPLNSSD- 62
Query: 167 HTPPKYFLKFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGA 226
YFL L S ++ S ++T L+DLH++H +M PFAGFSMP+ Y
Sbjct: 63 ----NYFLHHTFLSRNLA---SSSTAVSTLKKTQLHDLHIAHKARMSPFAGFSMPLVYSD 115
Query: 227 VSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE 286
+S T SH TR+K S+FDVSHM+Q ++G + L + + ++ L TLS F +E
Sbjct: 116 LSHTESHNWTRNKASLFDVSHMVQHHISGPGALDLLLKVTPSSLNLLQINHSTLSCFLDE 175
Query: 287 Q-GGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFK-SLGKDIHLQFLS---A 341
Q GGI DD ++T+ +S + V+NA RRK D+D + + F+ G H +S
Sbjct: 176 QTGGIIDDTVITRLGPESFYFVTNAGRRKEDLDFLHKEIENFRWRHGSSAHKSIISWSVL 235
Query: 342 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--T 387
+ L+A+QGPLS++ILQ T+ DLS+L+F R + P L +
Sbjct: 236 DNHALVALQGPLSASILQSLITTDEAGTNSDLSTLHFCQCRFLHLNFPDGTHTPSHLLIS 295
Query: 388 RAGYTGEDGVEISVPG----EQCTHIVEALLSDEDVKLAGLGARDSL 430
R GYTGEDG EIS+P + + + LLS+ V+LAGL ARDSL
Sbjct: 296 RTGYTGEDGFEISIPTDIDPQLPMKVSQLLLSNPSVRLAGLAARDSL 342
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAND--Q 61
GK RR+ + F GAS+I Q+ S ++ +R G TG P R I + D
Sbjct: 371 GKDRRDPSSPSSAFNGASVILPQLTSPTKTLTERRIGLVIETGPPARTDAPIIDMADGST 430
Query: 62 RVGAITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++G +TSG PSP+L N+AMGY++ + K G E+ V VR K V PFV + +Y
Sbjct: 431 QIGMVTSGLPSPTLGGVNVAMGYVKQGFHKKGTEVGVLVRKKLHKATVVSTPFVPTKFY 489
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 18/107 (16%)
Query: 467 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--T 512
+ L+A+QGPLS++ILQ T+ DLS+L+F R + P L +
Sbjct: 236 DNHALVALQGPLSASILQSLITTDEAGTNSDLSTLHFCQCRFLHLNFPDGTHTPSHLLIS 295
Query: 513 RAGYTGEDGVEISVPG----EQCTHIVEALLSDEDVKLAGLGARDSL 555
R GYTGEDG EIS+P + + + LLS+ V+LAGL ARDSL
Sbjct: 296 RTGYTGEDGFEISIPTDIDPQLPMKVSQLLLSNPSVRLAGLAARDSL 342
>gi|254284910|ref|ZP_04959876.1| glycine cleavage system T protein [Vibrio cholerae AM-19226]
gi|150424913|gb|EDN16690.1| glycine cleavage system T protein [Vibrio cholerae AM-19226]
Length = 376
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IGGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWVGLGARDSL 231
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHATLGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIGGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWVGLGARDSL 231
>gi|15597638|ref|NP_251132.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa PAO1]
gi|418584613|ref|ZP_13148673.1| glycine cleavage system T protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418594866|ref|ZP_13158610.1| glycine cleavage system T protein [Pseudomonas aeruginosa MPAO1/P2]
gi|9948489|gb|AAG05830.1|AE004671_6 glycine cleavage system protein T2 [Pseudomonas aeruginosa PAO1]
gi|375041581|gb|EHS34271.1| glycine cleavage system T protein [Pseudomonas aeruginosa MPAO1/P2]
gi|375045598|gb|EHS38176.1| glycine cleavage system T protein [Pseudomonas aeruginosa MPAO1/P1]
Length = 373
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 VALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 -----AHLRRHLEGRCSVEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPSELAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|222110934|ref|YP_002553198.1| glycine cleavage system t protein [Acidovorax ebreus TPSY]
gi|221730378|gb|ACM33198.1| glycine cleavage system T protein [Acidovorax ebreus TPSY]
Length = 376
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 141/267 (52%), Gaps = 19/267 (7%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH+ G +MVPFAG+SMPVQY + + A H HTR+ +FDVSHM Q + G
Sbjct: 10 TPLNALHIELGARMVPFAGYSMPVQY-PMGLMAEHHHTRTAAGLFDVSHMGQLKLVGPDA 68
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E++ DV +L GK L N++GGI DDL+ + +D LF++ N + + D+
Sbjct: 69 AAAFETLMPVDVVDLPVGKQRYGLLLNDEGGIIDDLMFFRMAQDELFVIVNGACKVGDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ Q+R Q + ++ L+A+QGP ++ +L R + L FMT
Sbjct: 129 HI---QERIGQ-----RCQVIPMPDQALLALQGPQAAAVLARLAP-GVDKLVFMTGGHFD 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL-------- 430
IAG C +TR+GYTGEDG EISVP Q + LL+ +VK GLGAR+SL
Sbjct: 180 IAGAQCFVTRSGYTGEDGFEISVPATQAEALARTLLAQPEVKPIGLGARNSLRLEAGLCL 239
Query: 431 -SGDITLNTPVPHGSLKLSNDRFKSLG 456
DI T P L + + + G
Sbjct: 240 YGNDIDTTTTPPEAGLNWAIQKVRRTG 266
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIKS--GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +QI S ++RKR G + VP+R E+ N + +R+G +TSG +P+
Sbjct: 270 AGGFPGADKVLAQIDSPATLTRKRVGLVALERVPVREHTELQNESGERIGEVTSGLLAPT 329
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K IA+ Y+ PA++ G + VR K V ++V PFV + YY
Sbjct: 330 ADKPIALAYVMPAHAAPGTRVNAMVRGKAVPMEVAATPFVPTRYY 374
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
Q + ++ L+A+QGP ++ +L R + L FMT IAG C +TR+GYTGEDG
Sbjct: 139 QVIPMPDQALLALQGPQAAAVLARLAP-GVDKLVFMTGGHFDIAGAQCFVTRSGYTGEDG 197
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP Q + LL+ +VK GLGAR+SL
Sbjct: 198 FEISVPATQAEALARTLLAQPEVKPIGLGARNSL 231
>gi|374291768|ref|YP_005038803.1| glycine cleavage system T-protein (aminomethyltransferase)
[Azospirillum lipoferum 4B]
gi|357423707|emb|CBS86567.1| glycine cleavage system T-protein (aminomethyltransferase)
[Azospirillum lipoferum 4B]
Length = 370
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 142/240 (59%), Gaps = 11/240 (4%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+ +A + TPL+ LH+ G +MVPFAG+ MPVQY + I H HTR K +FDVSHM Q
Sbjct: 3 EAATALKTTPLHALHVELGARMVPFAGYDMPVQY-PLGILKEHQHTREKAGLFDVSHMGQ 61
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+TG LE++ D+ L G+ +LF NEQGGI DDL+VT D LFLV NA
Sbjct: 62 VRLTGDDPAAALETLVPGDIKGLAQGRMRYTLFLNEQGGILDDLMVTNA-GDHLFLVVNA 120
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ ++ D+ A R K GK + ++ L+A+QGP+++ ++ R + +++
Sbjct: 121 ACKEQDV-----AHLREKLAGK---AEVELLDDLALMALQGPMAAEVMARFVP-EAATMK 171
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM+ T G+P LTR+GYTGEDG EIS I ALL++ +V+ GLGARDSL
Sbjct: 172 FMSYLSATFKGVPVILTRSGYTGEDGYEISCDKADAEMIARALLAESEVEAIGLGARDSL 231
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR GGFPG II Q+ G +R+R G G P R EI +AN R+G ITSG
Sbjct: 261 KRRRAEGGFPGYDIIHRQLTEGATRRRVGIQPEGRQPAREHTEIQDANGTRIGEITSGGF 320
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P+ +AMGY++ A S VG L + VR K + +V PFV YY
Sbjct: 321 GPTAGAPVAMGYVDIANSAVGTPLTLVVRGKPLPARVAATPFVPQRYY 368
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 475 QGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHI 534
QGP+++ ++ R + +++ FM+ T G+P LTR+GYTGEDG EIS I
Sbjct: 152 QGPMAAEVMARFVP-EAATMKFMSYLSATFKGVPVILTRSGYTGEDGYEISCDKADAEMI 210
Query: 535 VEALLSDEDVKLAGLGARDSL 555
ALL++ +V+ GLGARDSL
Sbjct: 211 ARALLAESEVEAIGLGARDSL 231
>gi|325090734|gb|EGC44044.1| aminomethyltransferase [Ajellomyces capsulatus H88]
Length = 491
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 181/347 (52%), Gaps = 38/347 (10%)
Query: 107 KVTKMPFVKSNYYTPPKIRKVKKKGDEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNY 166
K +P+++ YT P IR G P S+ +L + +++P S+
Sbjct: 11 KWAALPWLRP-VYTTPAIRL--GNGCRPLSSRALGQLTIPAEAS----SRSRVPLNSSD- 62
Query: 167 HTPPKYFLKFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGA 226
YFL L S ++ S ++T L+DLH++H +M PFAGFSMP+ Y
Sbjct: 63 ----NYFLHHTFLSRNLA---SSSTAVSTLKKTQLHDLHIAHKARMSPFAGFSMPLVYSD 115
Query: 227 VSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE 286
+S T SH TR+K S+FDVSHM+Q ++G + L + + ++ L TLS F +E
Sbjct: 116 LSHTESHNWTRNKASLFDVSHMVQHHISGPGALDLLLKVTPSSLNLLQINHSTLSCFLDE 175
Query: 287 Q-GGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFK-SLGKDIHLQFLS---A 341
Q GGI DD ++T+ +S + V+NA RRK D+D + + F+ G H +S
Sbjct: 176 QTGGIIDDTVITRLGPESFYFVTNAGRRKEDLDFLHKEIENFRWRHGSSAHKSIISWSVL 235
Query: 342 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--T 387
+ L+A+QGPLS++ILQ T+ DLS+L+F R + P L +
Sbjct: 236 DNHALVALQGPLSASILQSLITTDEAGTNSDLSTLHFCQCRFLHLNFPDGTHTPSHLLIS 295
Query: 388 RAGYTGEDGVEISVPG----EQCTHIVEALLSDEDVKLAGLGARDSL 430
R GYTGEDG EIS+P + + + LLS+ V+LAGL ARDSL
Sbjct: 296 RTGYTGEDGFEISIPTDIDPQLPMKVSQLLLSNPSVRLAGLAARDSL 342
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAND--Q 61
GK RR+ + F GAS+I Q+ S ++ +R G TG P R I + D
Sbjct: 371 GKDRRDPSSPSSAFNGASVILPQLTSPTKTLTERRIGLVIETGPPARTDAPIIDMADGST 430
Query: 62 RVGAITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++G +TSG PSP+L N+AMGY++ + K G E+ V VR K V PFV + +Y
Sbjct: 431 QIGMVTSGLPSPTLGGVNVAMGYVKQGFHKKGTEVGVLVRKKVHKATVVSTPFVPTKFY 489
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 18/107 (16%)
Query: 467 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--T 512
+ L+A+QGPLS++ILQ T+ DLS+L+F R + P L +
Sbjct: 236 DNHALVALQGPLSASILQSLITTDEAGTNSDLSTLHFCQCRFLHLNFPDGTHTPSHLLIS 295
Query: 513 RAGYTGEDGVEISVPG----EQCTHIVEALLSDEDVKLAGLGARDSL 555
R GYTGEDG EIS+P + + + LLS+ V+LAGL ARDSL
Sbjct: 296 RTGYTGEDGFEISIPTDIDPQLPMKVSQLLLSNPSVRLAGLAARDSL 342
>gi|221067273|ref|ZP_03543378.1| glycine cleavage system T protein [Comamonas testosteroni KF-1]
gi|220712296|gb|EED67664.1| glycine cleavage system T protein [Comamonas testosteroni KF-1]
Length = 378
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 132/232 (56%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G +MVPFAG++MPVQY + A HLHTR +FDVSHM Q ++ G
Sbjct: 13 TPLFALHQKLGARMVPFAGYAMPVQY-PQGLMAEHLHTRKAAGLFDVSHMGQLLLRGPDA 71
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ DV +L K L NEQGGI DDL+ ED LFL+ N + ++ D+
Sbjct: 72 AAALESLMPVDVMDLGQHKQRYGLLLNEQGGILDDLMFVNRGED-LFLIVNGACKEADIA 130
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ Q R + + I L ER L+A+QGP ++ L R ++ L FMT
Sbjct: 131 HI---QSRIANRCEVIPL-----PERALLALQGPQAAAALSRLIP-GVAQLVFMTGNHFD 181
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G +TR+GYTGEDG EIS+PGE T EALL+ +V GLGAR+SL
Sbjct: 182 WQGHALYITRSGYTGEDGFEISLPGEAATAFAEALLAQPEVAPIGLGARNSL 233
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 19 GGFPGASIIQSQIKS--GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA+I+ Q+++ + RKR G + +P+R + N + Q +G ITSG SP+L
Sbjct: 273 GGFPGAAIVLEQLQNPQSLRRKRVGLIALERIPVREPAVLENMDGQHIGHITSGLLSPTL 332
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +A+ Y+EP Y+ + E++ VR K V +KV PFV + YY
Sbjct: 333 NQPVALAYVEPDYAAIDTEIFAMVRGKPVPMKVVATPFVPTRYY 376
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGP ++ L R ++ L FMT G +TR+GYTGEDG EIS+P
Sbjct: 147 ERALLALQGPQAAAALSRLIP-GVAQLVFMTGNHFDWQGHALYITRSGYTGEDGFEISLP 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
GE T EALL+ +V GLGAR+SL
Sbjct: 206 GEAATAFAEALLAQPEVAPIGLGARNSL 233
>gi|56708847|ref|YP_164888.1| glycine cleavage system T protein [Ruegeria pomeroyi DSS-3]
gi|56680532|gb|AAV97197.1| glycine cleavage system T protein [Ruegeria pomeroyi DSS-3]
Length = 365
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 130/234 (55%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYDLH+ GGKMV FAG+ MPVQY + I H R K ++FDVSHM Q ++ G
Sbjct: 6 KRTPLYDLHVELGGKMVDFAGWEMPVQY-PMGIMGEHKQCREKAALFDVSHMGQVILRGD 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LE +C L GK FTN +GGI DDLIV+ E F+V NA+ R D
Sbjct: 65 DIGAKLEKLCPQVFLTLPEGKARYGFFTNAEGGIMDDLIVSNAGE-YFFVVVNAALRHQD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A D G ++ F +R L+AVQGP + ++ R L FM +
Sbjct: 124 IPHLAAHLD-----GVEVTEIF----DRALVAVQGPSAEDVVGRLCPA-ARDLKFMETML 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R GYTGEDG EIS+P + I L+ ED + AGLGARDSL
Sbjct: 174 GEIDGVDCRISRLGYTGEDGYEISIPEGEAIRISRLFLAHEDCEPAGLGARDSL 227
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQ 61
I + LL KRRRE GGFPGA I +I G RK G G P R EI + +
Sbjct: 247 IEASLLWAIQKRRREEGGFPGAGRILKEIAEGAPRKLVGIKPEGRAPARQHVEIQSLGGE 306
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+G ITSG P++ +AMGY+ A++ G ++ + +R K ++ +PFV NY
Sbjct: 307 TIGEITSGGFGPTVGAPVAMGYVASAHAAPGEKVNLIIRGKAQPAEIVALPFVAQNY 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+AVQGP + ++ R L FM + I G+ C ++R GYTGEDG EIS+P
Sbjct: 141 DRALVAVQGPSAEDVVGRLCPA-ARDLKFMETMLGEIDGVDCRISRLGYTGEDGYEISIP 199
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ I L+ ED + AGLGARDSL
Sbjct: 200 EGEAIRISRLFLAHEDCEPAGLGARDSL 227
>gi|49088832|gb|AAT51611.1| PA2442, partial [synthetic construct]
Length = 374
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLVGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 VALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 -----AHLRRHLEGRCSVEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A + +G ++SG PSL
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIIDAQGRAIGKVSSGGFGPSLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ + +G + VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPSELAGLGSGVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + LL++ +V GLGARDSL
Sbjct: 202 PAAHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|154346172|ref|XP_001569023.1| putative aminomethyltransferase, mitochondrial precursor
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066365|emb|CAM44156.1| putative aminomethyltransferase, mitochondrial precursor
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 377
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 132/235 (56%), Gaps = 7/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+ HL+ KM FAG+ MP+ YG + + HL+TR +FDVSHM Q V
Sbjct: 6 KKTALHSFHLAQQAKMEAFAGYHMPISYGKLGVLKEHLYTRQVAGIFDVSHMGQYEVRST 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE+++E + D+ G+GTL+L TN QGGI+DD IVTK ++D L LV NA + D
Sbjct: 66 DREKFMEYVTPVDLQRTQVGQGTLTLLTNAQGGIKDDCIVTK-MDDHLLLVLNAGCKDKD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR- 375
+ M G D+ L L ER LIA+QGP ++ IL D + + FM R
Sbjct: 125 VAHMEEVLHEGAMKGADVRLVPL---ERSLIALQGPQAAAILSEFMD-GVPDMDFMHCRQ 180
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ +TR GYTGEDG EI+ +VE LLS +L GLGARDSL
Sbjct: 181 KVKIKGMEVQVTRCGYTGEDGFEIAASDRDVATLVELLLS-RKAELIGLGARDSL 234
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQS----QIKSGVSRKRTGFTSTGVPIRPGYEIFNA 58
+ +RL+ KRR E GGF G I++ K V R R G STG P+ +
Sbjct: 254 VAARLMWTISKRRMEEGGFIGYEAIKNFRDNASKGAVPRLRVGLVSTG-PVAREKTVIEV 312
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ ++VG +TSGCPSP LKKNIA+GY++ + GV++ + VR +RV +V PFV ++Y
Sbjct: 313 DGKQVGEVTSGCPSPCLKKNIALGYVDRGLAAKGVKVDLVVRGRRVPAEVVTPPFVPAHY 372
Query: 119 YTPPK 123
Y PK
Sbjct: 373 YRKPK 377
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 464 LSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR-PCTIAGIPCTLTRAGYTGEDGV 522
L P ER LIA+QGP ++ IL D + + FM R I G+ +TR GYTGEDG
Sbjct: 144 LVPLERSLIALQGPQAAAILSEFMD-GVPDMDFMHCRQKVKIKGMEVQVTRCGYTGEDGF 202
Query: 523 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EI+ +VE LLS +L GLGARDSL
Sbjct: 203 EIAASDRDVATLVELLLS-RKAELIGLGARDSL 234
>gi|330993209|ref|ZP_08317146.1| Aminomethyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759760|gb|EGG76267.1| Aminomethyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 377
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 151/273 (55%), Gaps = 25/273 (9%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV---T 254
RTPLYDLH+ G +MVPFAG+ MPVQY A + A HLHTR+K +FDVSHM Q + +
Sbjct: 7 RTPLYDLHIELGARMVPFAGYDMPVQYPA-GVMAEHLHTRAKAGLFDVSHMGQVRIRPKS 65
Query: 255 GKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
G++ + LE++ AD+ L PG+ +LFT GGI DDL+V + + L LV NA+
Sbjct: 66 GRNTDAARALETLVPADIVALRPGRQRYALFTTPDGGISDDLMVAN-MGEWLLLVVNAAC 124
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
++ D + AA L + ++ L + R L+A+QGP + L + + + FM
Sbjct: 125 KQADFAHVHAA------LAQTCTVEML--DGRALMALQGPAAEVALA-SLNPRAAGMRFM 175
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL-- 430
+AG+ C ++R+GYTGEDG EI + + ALL+ DV AGLGARDSL
Sbjct: 176 DVVEMELAGMACIISRSGYTGEDGYEIGMASGDALTVARALLACPDVAPAGLGARDSLRL 235
Query: 431 -------SGDITLNTPVPHGSLKLSNDRFKSLG 456
DI L T +L+ S + + G
Sbjct: 236 EAGLCLYGADIDLTTTPVEAALEWSIQKSRKPG 268
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAIT 67
PG R GG+PGA+I+ Q+ G +R+R G + G P+R G ++F A Q VG +T
Sbjct: 267 PGGVR--AGGYPGAAIVADQLADGTTRRRVGLRAEGRAPVRGGTDLFADEAGAQPVGRVT 324
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SG PS +AMGY+ ++ VG L+ VR + + V+V+ +PFV +
Sbjct: 325 SGAFGPSAGGPVAMGYVAADHAGVGTRLFAAVRGRLLPVQVSALPFVAPTF 375
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+ R L+A+QGP + L + + + FM +AG+ C ++R+GYTGEDG EI +
Sbjct: 146 DGRALMALQGPAAEVALA-SLNPRAAGMRFMDVVEMELAGMACIISRSGYTGEDGYEIGM 204
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ ALL+ DV AGLGARDSL
Sbjct: 205 ASGDALTVARALLACPDVAPAGLGARDSL 233
>gi|340787212|ref|YP_004752677.1| glycine cleavage system protein T [Collimonas fungivorans Ter331]
gi|340552479|gb|AEK61854.1| Aminomethyltransferase (glycine cleavage system T protein)
[Collimonas fungivorans Ter331]
Length = 404
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 142/247 (57%), Gaps = 11/247 (4%)
Query: 184 TFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVF 243
T S S+ +A RTPLY LHL G KMVPFAG+ MP+QY I H HTRS+ +F
Sbjct: 26 TIFMSDASNAAAAARTPLYQLHLELGAKMVPFAGYDMPLQY-PTGILKEHNHTRSQAGLF 84
Query: 244 DVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS 303
DVSHM Q ++G LES+ D+ +L + ++FTN QGGI DDL+V D
Sbjct: 85 DVSHMGQLRLSGADAAAALESLVPVDIVDLPVNRQRYAVFTNPQGGILDDLMVANA-GDH 143
Query: 304 LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD 363
LFLV NA+ ++ D + + + L + LS +R L+A+QGP ++ ++ R
Sbjct: 144 LFLVVNAACKQQDTEHL------RQHLSSRCQIDELS--DRSLLALQGPAAAAVMARLAP 195
Query: 364 LDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAG 423
D + + FM + T+AG C ++R+GYTGEDG EISVP + LL+ +V G
Sbjct: 196 -DTAQMVFMQTAKFTLAGSGCFVSRSGYTGEDGFEISVPNAAAETLARLLLAQPEVAPIG 254
Query: 424 LGARDSL 430
LGARDSL
Sbjct: 255 LGARDSL 261
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GG+PGA +IQ Q++ GV RKR G +P R G E+ +A+ ++VG ITSG P++
Sbjct: 300 AGGYPGAELIQRQLEQGVGRKRVGLLLKDRMPAREGAELVDADGKQVGKITSGGFGPTVG 359
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+A+GY++ A+++VG L VR K V ++V K PF + Y+
Sbjct: 360 GPVALGYVDSAHAQVGTLLQAVVRGKSVPIEVVKTPFTPTRYF 402
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP ++ ++ R D + + FM + T+AG C ++R+GYTGEDG EISVP
Sbjct: 175 DRSLLALQGPAAAAVMARLAP-DTAQMVFMQTAKFTLAGSGCFVSRSGYTGEDGFEISVP 233
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ LL+ +V GLGARDSL
Sbjct: 234 NAAAETLARLLLAQPEVAPIGLGARDSL 261
>gi|429770632|ref|ZP_19302685.1| aminomethyltransferase [Brevundimonas diminuta 470-4]
gi|429183949|gb|EKY24986.1| aminomethyltransferase [Brevundimonas diminuta 470-4]
Length = 370
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 127/239 (53%), Gaps = 12/239 (5%)
Query: 192 SPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S A + TPL H + G +MV F G+ MPVQY V A H TR +FDVSHM Q
Sbjct: 2 SDQALKTTPLNAAHRALGARMVGFGGYDMPVQYEGV--LAEHRWTREHAGLFDVSHMGQA 59
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG E D + PGK +L NEQGG+ DDL+ K ED L++V NA
Sbjct: 60 RITGADAIAQFERFVPGDYAIVKPGKQKYTLLLNEQGGVMDDLMAGKPFEDGLYIVVNAG 119
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + A L D L+ L +R L+A+QGP ++ ++ H+ +L+ + F
Sbjct: 120 NKDADFAFLNA------HLSGDAKLEVL---DRALLAIQGPEAADVMAAHS-AELADMGF 169
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M R + C ++R+GYTGEDG EISVP + LLSD VK GLGARDSL
Sbjct: 170 MDCRAIRLFDEDCIVSRSGYTGEDGYEISVPAAAAERVWNLLLSDARVKPVGLGARDSL 228
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSGCP 71
K R+E F GA +I Q+ G +R R G G P R G EI + +G ITSG P
Sbjct: 258 KSRKERADFAGADVILKQLADGPARVRIGLHVKEGAPAREGAEIADMGGAVIGKITSGGP 317
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SP+L +NIAMGY+ PA++++G EL V VR + +V PFV + YY PK
Sbjct: 318 SPTLGRNIAMGYVPPAFAELGTELKVLVRGRPAAAEVIATPFVATRYYRKPK 369
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D L+ L +R L+A+QGP ++ ++ H+ +L+ + FM R + C ++R+
Sbjct: 132 LSGDAKLEVL---DRALLAIQGPEAADVMAAHS-AELADMGFMDCRAIRLFDEDCIVSRS 187
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP + LLSD VK GLGARDSL
Sbjct: 188 GYTGEDGYEISVPAAAAERVWNLLLSDARVKPVGLGARDSL 228
>gi|209966902|ref|YP_002299817.1| glycine cleavage system T protein [Rhodospirillum centenum SW]
gi|209960368|gb|ACJ01005.1| glycine cleavage system T protein [Rhodospirillum centenum SW]
Length = 384
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 139/233 (59%), Gaps = 10/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPL+ LH G +MVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q + G
Sbjct: 23 RTPLHALHGELGARMVPFAGYDMPVQYPA-GVLKEHLHTRTGAGLFDVSHMGQVRLRGDD 81
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ LE++ D+ L G+ +LFTN+ GGI DDL+VT+ LFLV NA+ ++ D+
Sbjct: 82 PAKALEALVPGDIQGLAEGRIRYTLFTNDHGGILDDLMVTRVGPGELFLVVNAACKQADL 141
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A + +++L ++ GL+A+QGP ++ +L RH +++ FM++
Sbjct: 142 AHLRAGL-------PGVAVEYLG-DDAGLLALQGPAAAAVLARHVPA-AAAMPFMSAITA 192
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GIP ++R+GYTGEDG EI G + LL++ +V GLGARDSL
Sbjct: 193 DIRGIPVRISRSGYTGEDGYEIGAAGTDAEALARLLLAEPEVAPIGLGARDSL 245
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPGA+++Q Q + G RKR G G P R EI A+ +G+ITSG
Sbjct: 275 KRRREEGGFPGAALVQRQFREGAVRKRVGILPEGRAPAREHTEIQGADGAVIGSITSGGF 334
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PS+ +AMGY+ A++ VG + + VR K + KV +PFV YY
Sbjct: 335 GPSVNGPVAMGYVAAAHAAVGTPVNLMVRGKALPAKVAALPFVPHRYY 382
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTG 518
+ +++L ++ GL+A+QGP ++ +L RH +++ FM++ I GIP ++R+GYTG
Sbjct: 151 VAVEYLG-DDAGLLALQGPAAAAVLARHVPA-AAAMPFMSAITADIRGIPVRISRSGYTG 208
Query: 519 EDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EDG EI G + LL++ +V GLGARDSL
Sbjct: 209 EDGYEIGAAGTDAEALARLLLAEPEVAPIGLGARDSL 245
>gi|209542714|ref|YP_002274943.1| glycine cleavage system T protein [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530391|gb|ACI50328.1| glycine cleavage system T protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 377
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 140/238 (58%), Gaps = 16/238 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPL+DLHLS G +MVPF G+ MPVQY A + A H HTR+ +FDVSHM Q + +
Sbjct: 7 RTPLHDLHLSLGARMVPFGGYEMPVQYRA-GVMAEHQHTRAAAGLFDVSHMGQIRLRARS 65
Query: 258 -REE----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
R E LE + AD+ L PG+ +L TNEQGGI DDL+V++ + D+L LV NA+
Sbjct: 66 GRVEDAALALERLVPADILSLKPGRQRYALLTNEQGGIIDDLMVSR-VGDTLLLVVNAAC 124
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D+ + AA D S +R LIA+QGPL+ L R + + FM
Sbjct: 125 KDADLAHITAALDD--------ACIVESLPDRALIALQGPLAGAALARLAPA-SADMRFM 175
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+PC ++R+GYTGEDG E+ + + EALL+ +V+ GLGARDSL
Sbjct: 176 DVAEFDVAGVPCIVSRSGYTGEDGFELGMESGGTVRVAEALLAQAEVEPVGLGARDSL 233
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQR-VGAITSGCPSPSLKK 77
FPGA II ++I+ G +R+R G G P+R G +F +A R VG +TSG P+
Sbjct: 275 FPGADIILARIQDGAARRRVGIAVDGRAPVRGGARLFADAEGHRPVGHVTSGAFGPTAGA 334
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY++ A++ G L+ +R K V V V +PFV +
Sbjct: 335 PVAMGYVDIAHAATGTALFAELRGKYVPVTVAALPFVAPGF 375
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGPL+ L R + + FM +AG+PC ++R+GYTGEDG E+ +
Sbjct: 147 DRALIALQGPLAGAALARLAPA-SADMRFMDVAEFDVAGVPCIVSRSGYTGEDGFELGME 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EALL+ +V+ GLGARDSL
Sbjct: 206 SGGTVRVAEALLAQAEVEPVGLGARDSL 233
>gi|440801799|gb|ELR22804.1| glycine cleavage system T protein [Acanthamoeba castellanii str.
Neff]
Length = 414
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 138/244 (56%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L+ H++ GG+MVPF G+ MPVQY SI +H HTR+ +FDVSHM Q + G+
Sbjct: 34 KRTALHADHVALGGRMVPFCGWDMPVQYKE-SIIDTHTHTRTHAGLFDVSHMGQLKLHGR 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R E++ES+ V D+ L LSLFTNEQGGI+DD ++T D L++V NA D
Sbjct: 93 DRVEFMESLVVGDIKGLATDNARLSLFTNEQGGIKDDTVITNG-ADWLYVVVNAGCADKD 151
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQG------PLSSTILQRHTD---LDLS 367
+ + RFK+ GK++ L+ LS + L+A+QG P ++ ++ H L
Sbjct: 152 LAHIQEHLARFKASGKEVDLEILS-PDYSLVALQGTGDLFRPEAAAVVGEHIAGGPESLR 210
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE-DVKLAGLGA 426
L FM+ R +P +TR GYTGEDG EISVP + LL V GL A
Sbjct: 211 GLAFMSGRDTRFDSLPVRITRCGYTGEDGFEISVPTSDAVTLWRTLLQHTGKVMPVGLAA 270
Query: 427 RDSL 430
RDSL
Sbjct: 271 RDSL 274
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 62/112 (55%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGFPGA +I QIK GV+RKR GF R + + + +G TSG
Sbjct: 303 GKRRRAEGGFPGADVILKQIKEGVTRKRVGFVLAEGIARAHATVHDEKGELLGEATSGGY 362
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
PSLKK + M Y+ A +K G + V+VR K V MPF +NYY P +
Sbjct: 363 GPSLKKAVGMTYLPTALAKNGTPIQVQVRKKFYPATVAAMPFHPTNYYKPTQ 414
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQG------PLSSTILQRHTD---LDLSSLYFMTSRP 501
RFK+ GK++ L+ LSP+ L+A+QG P ++ ++ H L L FM+ R
Sbjct: 161 RFKASGKEVDLEILSPD-YSLVALQGTGDLFRPEAAAVVGEHIAGGPESLRGLAFMSGRD 219
Query: 502 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE-DVKLAGLGARDSL 555
+P +TR GYTGEDG EISVP + LL V GL ARDSL
Sbjct: 220 TRFDSLPVRITRCGYTGEDGFEISVPTSDAVTLWRTLLQHTGKVMPVGLAARDSL 274
>gi|222148663|ref|YP_002549620.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
vitis S4]
gi|221735649|gb|ACM36612.1| glycine cleavage system T protein aminomethyltransferase
[Agrobacterium vitis S4]
Length = 379
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 153/278 (55%), Gaps = 25/278 (8%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV- 253
A +RTPLYDLHLS G +MV FAG+ MPVQY A + HLHTR+ +FDVSHM Q ++
Sbjct: 6 ALKRTPLYDLHLSLGARMVGFAGYDMPVQYPA-GVLKEHLHTRANAGLFDVSHMGQVLLK 64
Query: 254 --TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
+GK ++ L E++ D+ L G+ FTNE GGI DDL++T D LF+V N
Sbjct: 65 PKSGKVQDAALALETLVPVDILALKEGRQRYGFFTNEDGGILDDLMITNR-GDHLFVVVN 123
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A+ + D+ M A L ++ ++ L E+R L+A+QGP + +L +S +
Sbjct: 124 AACKDADIAHMRA------HLAENCTIEVL--EDRALLALQGPRAEAVLGELW-AGVSGM 174
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FM R + C ++R+GY+GEDG EISVP ++ + + LL D + GLGARDS
Sbjct: 175 KFMDVREIPLLDTLCIVSRSGYSGEDGFEISVPADKAEALAKVLLDHPDCQPIGLGARDS 234
Query: 430 L---------SGDITLNTPVPHGSLKLSNDRFKSLGKD 458
L DI T G+++ + + G D
Sbjct: 235 LRLEAGLCLYGNDIDTTTSPVEGAIEWGIQKARRAGGD 272
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPSL 75
GGFPGAS I +++ +G SR+R G G P+R ++F + +V G +TSG P++
Sbjct: 275 GGFPGASRILTELANGTSRRRVGLKPEGKAPVRGHSKLFADAEGKVEVGEVTSGGFGPTV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AM Y+ ++ VG +L+ VR K + V V +PF+ Y
Sbjct: 335 EGPVAMAYVSADHASVGTQLFAEVRGKYLPVTVATLPFITPTY 377
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + +L +S + FM R + C ++R+GY+GEDG EISV
Sbjct: 148 EDRALLALQGPRAEAVLGELW-AGVSGMKFMDVREIPLLDTLCIVSRSGYSGEDGFEISV 206
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + + LL D + GLGARDSL
Sbjct: 207 PADKAEALAKVLLDHPDCQPIGLGARDSL 235
>gi|359396567|ref|ZP_09189618.1| hypothetical protein KUC_3246 [Halomonas boliviensis LC1]
gi|357969245|gb|EHJ91693.1| hypothetical protein KUC_3246 [Halomonas boliviensis LC1]
Length = 370
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 137/237 (57%), Gaps = 18/237 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ LHL G KMVPFAG+ MPVQY + + H HTR K +FDVSHM Q V+G
Sbjct: 5 KQTPLHALHLKLGAKMVPFAGYDMPVQY-PLGVKKEHEHTRQKCGLFDVSHMGQISVSGD 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E LE++ AD+ L+ G LFT+ +GGI DDL+V D +LV NA+ + D
Sbjct: 64 TVAEALETLIPADLVGLEKGAQRYGLFTSTEGGIIDDLMVVNA-GDHFYLVVNAACKDQD 122
Query: 317 MD---LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ L +A+ + L +RGL+A+QGP + ++QR + L FM
Sbjct: 123 LAHLRLNLASTHTIEPL------------DRGLLALQGPQARDVMQRLCP-EACELVFMQ 169
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
TIAG ++R+GYTGEDG EISV + C E LL++ +V+ GLGARDSL
Sbjct: 170 HGRFTIAGQEVWVSRSGYTGEDGFEISVAADACEDFAEQLLAEPEVEAIGLGARDSL 226
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 464 LSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVE 523
+ P +RGL+A+QGP + ++QR + L FM TIAG ++R+GYTGEDG E
Sbjct: 136 IEPLDRGLLALQGPQARDVMQRLCP-EACELVFMQHGRFTIAGQEVWVSRSGYTGEDGFE 194
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
ISV + C E LL++ +V+ GLGARDSL
Sbjct: 195 ISVAADACEDFAEQLLAEPEVEAIGLGARDSL 226
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 3 IYSRLLIFPGKRRRE----TGGFPGASIIQSQIKS-GVSRKRTGFTSTG-VPIRPGYEIF 56
+ + L+ GK RR GGFPGA +I Q+ + +RKR G + G P+R G +
Sbjct: 246 VEAGLIWAIGKPRRHGGERAGGFPGADVILHQVDAKDHTRKRVGLLAEGRAPVREGAPLV 305
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+ VG +TSG PS+ K +AMGY+ ++ VR K++ + VT MPFVK
Sbjct: 306 DKAGNEVGIVTSGSFGPSVGKPVAMGYVTRELEAPQSAVFAVVRGKQLPMAVTPMPFVKP 365
Query: 117 NYY 119
YY
Sbjct: 366 GYY 368
>gi|429885336|ref|ZP_19366930.1| Aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae PS15]
gi|429227907|gb|EKY33871.1| Aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae PS15]
Length = 376
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L H ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLA-HLQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L H ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLA-HLQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|255712579|ref|XP_002552572.1| KLTH0C08030p [Lachancea thermotolerans]
gi|238933951|emb|CAR22134.1| KLTH0C08030p [Lachancea thermotolerans CBS 6340]
Length = 389
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 11/250 (4%)
Query: 185 FVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFD 244
+F SS +A ++T LYDLH+ GG MVPFAG++MPV+Y + SH+ TR+ +FD
Sbjct: 1 MIFKRLSSSAALKKTALYDLHVQLGGTMVPFAGYAMPVKYAGQTHVESHIWTRTHAGLFD 60
Query: 245 VSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSL 304
VSHMLQ+ + G ++L + D L G+GTLS+ N +GGI DD ++TK ++
Sbjct: 61 VSHMLQSRLEGPGATQFLHRVTPTDFQALPAGQGTLSVLLNARGGIVDDTLITKVADNKF 120
Query: 305 FLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL 364
+V+NA R K D+ + F+ ++ +R L+A+QGP + +L
Sbjct: 121 SIVTNAGRAKEDIAFLNEQVQGFEC-------RWEPVRDRALLALQGPEAKHVLGSLVAG 173
Query: 365 DLSS---LYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVK 420
L S LYF R G+ + R+GYTGEDG E+SV T + +L + V+
Sbjct: 174 GLQSLQDLYFGQRRSFRAGTGVEIDVARSGYTGEDGFEVSVANSDATDLARMMLENSAVR 233
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 234 AIGLAARDSL 243
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKS-GVSRKRTGFT--STGVPIRPGYEIF-NANDQRV 63
LI +R G F G S I QI + +R R GF G R +F + +V
Sbjct: 270 LISKSRRDGSLGEFNGFSHIMGQIANKSATRARVGFKYLGKGPAARTDAPVFSDEGKTQV 329
Query: 64 GAITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG +PSL NI Y++ K G +L+V VR+K +++ +MP V S+YY
Sbjct: 330 GHVTSGSAAPSLAGINIGQAYVQKGLHKAGTQLFVGVRNKIFPIQIARMPLVPSHYY 386
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL---YFMTSRPCTIA-GIPCTLTRAGYTGEDGVE 523
+R L+A+QGP + +L L SL YF R G+ + R+GYTGEDG E
Sbjct: 152 DRALLALQGPEAKHVLGSLVAGGLQSLQDLYFGQRRSFRAGTGVEIDVARSGYTGEDGFE 211
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+SV T + +L + V+ GL ARDSL
Sbjct: 212 VSVANSDATDLARMMLENSAVRAIGLAARDSL 243
>gi|86750847|ref|YP_487343.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris HaA2]
gi|86573875|gb|ABD08432.1| glycine cleavage system T protein [Rhodopseudomonas palustris HaA2]
Length = 382
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 136/241 (56%), Gaps = 16/241 (6%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A +RTPL+ LHL+ GGKMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q +
Sbjct: 9 ALKRTPLHALHLARGGKMVPFAGYDMPVQY-APGVLKEHLHTRASAGLFDVSHMGQIELR 67
Query: 255 GKH-----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
+ + LE++ D+ L G+ + FTN+ GGI DDL+VT L D LFLV N
Sbjct: 68 ARSGRLDDAAQALETLVPQDIVALARGRQRYAQFTNDSGGILDDLMVTN-LGDRLFLVVN 126
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A+ + D + A + + R L+A+QGP + L + D+ +L
Sbjct: 127 AACKTEDEAHLRAHMS--------ATCEITALPGRALLALQGPKAEAALAKFC-ADVVAL 177
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FM T+ +PC ++R+GYTGEDG EISVP + +ALL V+ GLGARDS
Sbjct: 178 KFMDVAELTLMDLPCVVSRSGYTGEDGFEISVPADGAEAFAQALLDRPGVQPIGLGARDS 237
Query: 430 L 430
L
Sbjct: 238 L 238
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPSL 75
GGF GA I +Q+ +G +RKR G G P+R G ++ D +G++TSG PSL
Sbjct: 278 GGFLGADAILAQLDAGATRKRVGLRPEGRAPVREGAPLYAGADTTDAIGSVTSGGFGPSL 337
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ + + + ++ VR +R+ ++V MPFV + Y
Sbjct: 338 NAPVAMGYLPASQAAIDSLVFAEVRGQRLPLRVAAMPFVTNTY 380
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
R L+A+QGP + L + D+ +L FM T+ +PC ++R+GYTGEDG EISVP
Sbjct: 153 RALLALQGPKAEAALAKFC-ADVVALKFMDVAELTLMDLPCVVSRSGYTGEDGFEISVPA 211
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
+ +ALL V+ GLGARDSL
Sbjct: 212 DGAEAFAQALLDRPGVQPIGLGARDSL 238
>gi|116252318|ref|YP_768156.1| glycine cleavage system aminomethyltransferase T [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256966|emb|CAK08060.1| putative aminomethyltransferase (glycine cleavage system t protein)
[Rhizobium leguminosarum bv. viciae 3841]
Length = 378
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 145/242 (59%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V
Sbjct: 5 AALKKTPLHALHLSLGARMVPFAGYDMPVQYPA-GVMKEHLHTRTEAGLFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ G I DDL++T L+D LF+V
Sbjct: 64 KAKSGSYEDAALALESLVPVDILGLAEGRQRYGFFTDDTGCILDDLMITH-LDDHLFIVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ ++ D+ + A +G + L +R LIA+QGP + +L D+++
Sbjct: 123 NAACKEADVAHLKA------HIGDQCDITVL---DRALIALQGPRAVEVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+P ++ LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPSDKAVDATMRLLEHPDVQAIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 148 DRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ LL DV+ GLGARDSL
Sbjct: 207 SDKAVDATMRLLEHPDVQAIGLGARDSL 234
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPS 74
GGFPG+ I S++++G SR+R G G P+R +++ + +V G +TSG PS
Sbjct: 273 AGGFPGSGRILSELENGASRRRVGLKPEGKAPVRGHAKLYADAEGKVEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G ++ VR K + + V+ +PFV Y
Sbjct: 333 VEGPVAMGYVPLSHAAAGTLVYAEVRGKYLPITVSALPFVTPTY 376
>gi|153829058|ref|ZP_01981725.1| glycine cleavage system T protein [Vibrio cholerae 623-39]
gi|148875487|gb|EDL73622.1| glycine cleavage system T protein [Vibrio cholerae 623-39]
Length = 376
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 INGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEINGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|419828032|ref|ZP_14351523.1| glycine cleavage system T protein [Vibrio cholerae HC-1A2]
gi|419832954|ref|ZP_14356415.1| glycine cleavage system T protein [Vibrio cholerae HC-61A2]
gi|419837106|ref|ZP_14360546.1| glycine cleavage system T protein [Vibrio cholerae HC-46B1]
gi|421343208|ref|ZP_15793612.1| glycine cleavage system T protein [Vibrio cholerae HC-43B1]
gi|422918869|ref|ZP_16953169.1| glycine cleavage system T protein [Vibrio cholerae HC-02A1]
gi|423736595|ref|ZP_17709736.1| glycine cleavage system T protein [Vibrio cholerae HC-41B1]
gi|423780122|ref|ZP_17714206.1| glycine cleavage system T protein [Vibrio cholerae HC-55C2]
gi|423841264|ref|ZP_17717953.1| glycine cleavage system T protein [Vibrio cholerae HC-59A1]
gi|423867829|ref|ZP_17721623.1| glycine cleavage system T protein [Vibrio cholerae HC-60A1]
gi|423999433|ref|ZP_17742626.1| glycine cleavage system T protein [Vibrio cholerae HC-02C1]
gi|424010912|ref|ZP_17753804.1| glycine cleavage system T protein [Vibrio cholerae HC-44C1]
gi|424011451|ref|ZP_17754319.1| glycine cleavage system T protein [Vibrio cholerae HC-55B2]
gi|424021274|ref|ZP_17761044.1| glycine cleavage system T protein [Vibrio cholerae HC-59B1]
gi|424626492|ref|ZP_18064942.1| glycine cleavage system T protein [Vibrio cholerae HC-50A1]
gi|424627383|ref|ZP_18065747.1| glycine cleavage system T protein [Vibrio cholerae HC-51A1]
gi|424631185|ref|ZP_18069408.1| glycine cleavage system T protein [Vibrio cholerae HC-52A1]
gi|424638102|ref|ZP_18076099.1| glycine cleavage system T protein [Vibrio cholerae HC-55A1]
gi|424641998|ref|ZP_18079870.1| glycine cleavage system T protein [Vibrio cholerae HC-56A1]
gi|424646515|ref|ZP_18084243.1| glycine cleavage system T protein [Vibrio cholerae HC-57A1]
gi|443525311|ref|ZP_21091505.1| glycine cleavage system T protein [Vibrio cholerae HC-78A1]
gi|341634093|gb|EGS58861.1| glycine cleavage system T protein [Vibrio cholerae HC-02A1]
gi|395941775|gb|EJH52452.1| glycine cleavage system T protein [Vibrio cholerae HC-43B1]
gi|408009221|gb|EKG47137.1| glycine cleavage system T protein [Vibrio cholerae HC-50A1]
gi|408020610|gb|EKG57904.1| glycine cleavage system T protein [Vibrio cholerae HC-55A1]
gi|408020660|gb|EKG57949.1| glycine cleavage system T protein [Vibrio cholerae HC-56A1]
gi|408028669|gb|EKG65540.1| glycine cleavage system T protein [Vibrio cholerae HC-52A1]
gi|408040561|gb|EKG76738.1| glycine cleavage system T protein [Vibrio cholerae HC-57A1]
gi|408060853|gb|EKG95461.1| glycine cleavage system T protein [Vibrio cholerae HC-51A1]
gi|408623105|gb|EKK96059.1| glycine cleavage system T protein [Vibrio cholerae HC-1A2]
gi|408626682|gb|EKK99523.1| glycine cleavage system T protein [Vibrio cholerae HC-41B1]
gi|408638539|gb|EKL10437.1| glycine cleavage system T protein [Vibrio cholerae HC-55C2]
gi|408647383|gb|EKL18911.1| glycine cleavage system T protein [Vibrio cholerae HC-60A1]
gi|408647756|gb|EKL19214.1| glycine cleavage system T protein [Vibrio cholerae HC-59A1]
gi|408650278|gb|EKL21553.1| glycine cleavage system T protein [Vibrio cholerae HC-61A2]
gi|408849557|gb|EKL89573.1| glycine cleavage system T protein [Vibrio cholerae HC-02C1]
gi|408857656|gb|EKL97344.1| glycine cleavage system T protein [Vibrio cholerae HC-46B1]
gi|408860697|gb|EKM00318.1| glycine cleavage system T protein [Vibrio cholerae HC-44C1]
gi|408864846|gb|EKM04262.1| glycine cleavage system T protein [Vibrio cholerae HC-59B1]
gi|408870822|gb|EKM10090.1| glycine cleavage system T protein [Vibrio cholerae HC-55B2]
gi|443456426|gb|ELT20099.1| glycine cleavage system T protein [Vibrio cholerae HC-78A1]
Length = 376
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 INGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEINGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|162148100|ref|YP_001602561.1| glycine cleavage system aminomethyltransferase T [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786677|emb|CAP56260.1| glycine cleavage system aminomethyltransferase T [Gluconacetobacter
diazotrophicus PAl 5]
Length = 409
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 140/238 (58%), Gaps = 16/238 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPL+DLHLS G +MVPF G+ MPVQY A + A H HTR+ +FDVSHM Q + +
Sbjct: 39 RTPLHDLHLSLGARMVPFGGYEMPVQYRA-GVMAEHQHTRAAAGLFDVSHMGQIRLRARS 97
Query: 258 -REE----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
R E LE + AD+ L PG+ +L TNEQGGI DDL+V++ + D+L LV NA+
Sbjct: 98 GRVEDAALALERLVPADILSLKPGRQRYALLTNEQGGIIDDLMVSR-VGDTLLLVVNAAC 156
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D+ + AA D S +R LIA+QGPL+ L R + + FM
Sbjct: 157 KDADLAHITAALDD--------ACIVESLPDRALIALQGPLAGAALARLAPA-SADMRFM 207
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+PC ++R+GYTGEDG E+ + + EALL+ +V+ GLGARDSL
Sbjct: 208 DVAEFDVAGVPCIVSRSGYTGEDGFELGMESGGTVRVAEALLAQAEVEPVGLGARDSL 265
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQR-VGAITSGCPSPSLKK 77
FPGA II ++I+ G +R+R G G P+R G +F +A R VG +TSG P+
Sbjct: 307 FPGADIILARIQDGAARRRVGIAVDGRAPVRGGARLFADAEGHRPVGHVTSGAFGPTAGA 366
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY++ A++ G L+ +R K V V V +PFV +
Sbjct: 367 PVAMGYVDIAHAATGTALFAELRGKYVPVTVAALPFVAPGF 407
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGPL+ L R + + FM +AG+PC ++R+GYTGEDG E+ +
Sbjct: 179 DRALIALQGPLAGAALARLAPA-SADMRFMDVAEFDVAGVPCIVSRSGYTGEDGFELGME 237
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EALL+ +V+ GLGARDSL
Sbjct: 238 SGGTVRVAEALLAQAEVEPVGLGARDSL 265
>gi|424659857|ref|ZP_18097105.1| glycine cleavage system T protein [Vibrio cholerae HE-16]
gi|408051302|gb|EKG86396.1| glycine cleavage system T protein [Vibrio cholerae HE-16]
Length = 376
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPAGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQMLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAQIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQMLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|153824035|ref|ZP_01976702.1| glycine cleavage system T protein, partial [Vibrio cholerae B33]
gi|126518444|gb|EAZ75667.1| glycine cleavage system T protein [Vibrio cholerae B33]
Length = 368
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 3 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 61
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 62 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 120
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 121 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 171
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 172 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 223
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 251 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLIGQTKAPVREGTELFDAQGNKI 309
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 310 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 365
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 126 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 182
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 183 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 223
>gi|121594298|ref|YP_986194.1| glycine cleavage system T protein [Acidovorax sp. JS42]
gi|120606378|gb|ABM42118.1| glycine cleavage system T protein [Acidovorax sp. JS42]
Length = 376
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 142/267 (53%), Gaps = 19/267 (7%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH+ G +MVPFAG+SMPVQY + + A H HTR+ +FDVSHM Q + G
Sbjct: 10 TPLNALHIELGARMVPFAGYSMPVQY-PMGLMAEHHHTRTAAGLFDVSHMGQLKLVGPDA 68
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E++ DV +L GK L N++GGI DDL+ + +D LF++ N + + D+
Sbjct: 69 AAAFETLMPVDVVDLPVGKQRYGLLLNDEGGIIDDLMFFRMAQDELFVIVNGACKVGDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A +G+ Q + ++ L+A+QGP ++ +L R + L FMT
Sbjct: 129 HIQA------RIGQ--RCQVIPMPDQALLALQGPQAAAVLARLAP-GVDKLVFMTGGHFD 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL-------- 430
IAG C +TR+GYTGEDG EISVP Q + LL+ +VK GLGAR+SL
Sbjct: 180 IAGAQCFVTRSGYTGEDGFEISVPATQAEALARTLLAQPEVKPIGLGARNSLRLEAGLCL 239
Query: 431 -SGDITLNTPVPHGSLKLSNDRFKSLG 456
DI T P L + + + G
Sbjct: 240 YGNDIDTTTTPPEAGLNWAIQKVRRTG 266
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
Q + ++ L+A+QGP ++ +L R + L FMT IAG C +TR+GYTGEDG
Sbjct: 139 QVIPMPDQALLALQGPQAAAVLARLAP-GVDKLVFMTGGHFDIAGAQCFVTRSGYTGEDG 197
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP Q + LL+ +VK GLGAR+SL
Sbjct: 198 FEISVPATQAEALARTLLAQPEVKPIGLGARNSL 231
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIKS--GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +QI S ++RKR + VP+R E+ N + +R+G +TSG +P+
Sbjct: 270 AGGFPGADKVLAQIDSPATLTRKRVALVALERVPVREHTELQNESGERIGEVTSGLLAPT 329
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K IA+ Y+ PA++ G + VR K V ++V PFV + YY
Sbjct: 330 ADKPIALAYVMPAHAAPGTRVNAMVRGKAVPMEVAATPFVPTRYY 374
>gi|121587119|ref|ZP_01676895.1| glycine cleavage system T protein [Vibrio cholerae 2740-80]
gi|121728088|ref|ZP_01681125.1| glycine cleavage system T protein [Vibrio cholerae V52]
gi|147671841|ref|YP_001215785.1| glycine cleavage system T protein [Vibrio cholerae O395]
gi|153819585|ref|ZP_01972252.1| glycine cleavage system T protein [Vibrio cholerae NCTC 8457]
gi|227119498|ref|YP_002821393.1| glycine cleavage system T protein [Vibrio cholerae O395]
gi|227811903|ref|YP_002811913.1| glycine cleavage system T protein [Vibrio cholerae M66-2]
gi|229506565|ref|ZP_04396074.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae BX 330286]
gi|229510639|ref|ZP_04400119.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae B33]
gi|229517230|ref|ZP_04406675.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae RC9]
gi|229606044|ref|YP_002876748.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae MJ-1236]
gi|254850520|ref|ZP_05239870.1| glycine cleavage system T protein [Vibrio cholerae MO10]
gi|255745920|ref|ZP_05419867.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholera CIRS 101]
gi|262163522|ref|ZP_06031268.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae INDRE 91/1]
gi|262168220|ref|ZP_06035918.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae RC27]
gi|298500126|ref|ZP_07009932.1| glycine cleavage system T protein [Vibrio cholerae MAK 757]
gi|360037240|ref|YP_004939002.1| glycine cleavage system T protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|379743710|ref|YP_005334762.1| glycine cleavage system T protein [Vibrio cholerae IEC224]
gi|417812313|ref|ZP_12458974.1| glycine cleavage system T protein [Vibrio cholerae HC-49A2]
gi|417816386|ref|ZP_12463016.1| glycine cleavage system T protein [Vibrio cholerae HCUF01]
gi|418330177|ref|ZP_12941207.1| glycine cleavage system T protein [Vibrio cholerae HC-06A1]
gi|418337289|ref|ZP_12946184.1| glycine cleavage system T protein [Vibrio cholerae HC-23A1]
gi|418339704|ref|ZP_12948585.1| glycine cleavage system T protein [Vibrio cholerae HC-28A1]
gi|418348955|ref|ZP_12953687.1| glycine cleavage system T protein [Vibrio cholerae HC-43A1]
gi|418353890|ref|ZP_12956615.1| glycine cleavage system T protein [Vibrio cholerae HC-61A1]
gi|419824303|ref|ZP_14347831.1| glycine cleavage system T protein [Vibrio cholerae CP1033(6)]
gi|421316976|ref|ZP_15767546.1| glycine cleavage system T protein [Vibrio cholerae CP1032(5)]
gi|421319627|ref|ZP_15770185.1| glycine cleavage system T protein [Vibrio cholerae CP1038(11)]
gi|421323668|ref|ZP_15774195.1| glycine cleavage system T protein [Vibrio cholerae CP1041(14)]
gi|421326641|ref|ZP_15777159.1| glycine cleavage system T protein [Vibrio cholerae CP1042(15)]
gi|421330954|ref|ZP_15781435.1| glycine cleavage system T protein [Vibrio cholerae CP1046(19)]
gi|421335358|ref|ZP_15785821.1| glycine cleavage system T protein [Vibrio cholerae CP1048(21)]
gi|421341034|ref|ZP_15791464.1| glycine cleavage system T protein [Vibrio cholerae HC-20A2]
gi|421346159|ref|ZP_15796543.1| glycine cleavage system T protein [Vibrio cholerae HC-46A1]
gi|422885452|ref|ZP_16931881.1| glycine cleavage system T protein [Vibrio cholerae HC-40A1]
gi|422898161|ref|ZP_16935571.1| glycine cleavage system T protein [Vibrio cholerae HC-48A1]
gi|422904319|ref|ZP_16939264.1| glycine cleavage system T protein [Vibrio cholerae HC-70A1]
gi|422914835|ref|ZP_16949331.1| glycine cleavage system T protein [Vibrio cholerae HFU-02]
gi|422927212|ref|ZP_16960213.1| glycine cleavage system T protein [Vibrio cholerae HC-38A1]
gi|423146562|ref|ZP_17134114.1| glycine cleavage system T protein [Vibrio cholerae HC-19A1]
gi|423147241|ref|ZP_17134712.1| glycine cleavage system T protein [Vibrio cholerae HC-21A1]
gi|423151063|ref|ZP_17138342.1| glycine cleavage system T protein [Vibrio cholerae HC-22A1]
gi|423157985|ref|ZP_17145033.1| glycine cleavage system T protein [Vibrio cholerae HC-32A1]
gi|423161525|ref|ZP_17148439.1| glycine cleavage system T protein [Vibrio cholerae HC-33A2]
gi|423162730|ref|ZP_17149589.1| glycine cleavage system T protein [Vibrio cholerae HC-48B2]
gi|423732550|ref|ZP_17705843.1| glycine cleavage system T protein [Vibrio cholerae HC-17A1]
gi|423750731|ref|ZP_17711770.1| glycine cleavage system T protein [Vibrio cholerae HC-50A2]
gi|423902308|ref|ZP_17728162.1| glycine cleavage system T protein [Vibrio cholerae HC-62A1]
gi|423913252|ref|ZP_17728857.1| glycine cleavage system T protein [Vibrio cholerae HC-77A1]
gi|424000173|ref|ZP_17743326.1| glycine cleavage system T protein [Vibrio cholerae HC-17A2]
gi|424003834|ref|ZP_17746885.1| glycine cleavage system T protein [Vibrio cholerae HC-37A1]
gi|424021970|ref|ZP_17761675.1| glycine cleavage system T protein [Vibrio cholerae HC-62B1]
gi|424028617|ref|ZP_17768210.1| glycine cleavage system T protein [Vibrio cholerae HC-69A1]
gi|424587912|ref|ZP_18027480.1| glycine cleavage system T protein [Vibrio cholerae CP1030(3)]
gi|424588786|ref|ZP_18028279.1| glycine cleavage system T protein [Vibrio cholerae CP1037(10)]
gi|424596575|ref|ZP_18035879.1| glycine cleavage system T protein [Vibrio Cholerae CP1044(17)]
gi|424603428|ref|ZP_18042558.1| glycine cleavage system T protein [Vibrio cholerae CP1047(20)]
gi|424604225|ref|ZP_18043263.1| glycine cleavage system T protein [Vibrio cholerae CP1050(23)]
gi|424608171|ref|ZP_18047103.1| glycine cleavage system T protein [Vibrio cholerae HC-39A1]
gi|424614813|ref|ZP_18053588.1| glycine cleavage system T protein [Vibrio cholerae HC-41A1]
gi|424618678|ref|ZP_18057333.1| glycine cleavage system T protein [Vibrio cholerae HC-42A1]
gi|424619606|ref|ZP_18058204.1| glycine cleavage system T protein [Vibrio cholerae HC-47A1]
gi|424650324|ref|ZP_18087923.1| glycine cleavage system T protein [Vibrio cholerae HC-57A2]
gi|424654116|ref|ZP_18091486.1| glycine cleavage system T protein [Vibrio cholerae HC-81A2]
gi|440710988|ref|ZP_20891632.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae 4260B]
gi|443505349|ref|ZP_21072284.1| glycine cleavage system T protein [Vibrio cholerae HC-64A1]
gi|443509251|ref|ZP_21075995.1| glycine cleavage system T protein [Vibrio cholerae HC-65A1]
gi|443513090|ref|ZP_21079709.1| glycine cleavage system T protein [Vibrio cholerae HC-67A1]
gi|443516636|ref|ZP_21083132.1| glycine cleavage system T protein [Vibrio cholerae HC-68A1]
gi|443520294|ref|ZP_21086672.1| glycine cleavage system T protein [Vibrio cholerae HC-71A1]
gi|443521499|ref|ZP_21087816.1| glycine cleavage system T protein [Vibrio cholerae HC-72A2]
gi|443530266|ref|ZP_21096283.1| glycine cleavage system T protein [Vibrio cholerae HC-7A1]
gi|443532919|ref|ZP_21098917.1| glycine cleavage system T protein [Vibrio cholerae HC-80A1]
gi|443537634|ref|ZP_21103492.1| glycine cleavage system T protein [Vibrio cholerae HC-81A1]
gi|449058086|ref|ZP_21736382.1| Aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae O1 str. Inaba G4222]
gi|121548655|gb|EAX58705.1| glycine cleavage system T protein [Vibrio cholerae 2740-80]
gi|121629636|gb|EAX62057.1| glycine cleavage system T protein [Vibrio cholerae V52]
gi|126509867|gb|EAZ72461.1| glycine cleavage system T protein [Vibrio cholerae NCTC 8457]
gi|146314224|gb|ABQ18764.1| glycine cleavage system T protein [Vibrio cholerae O395]
gi|227011045|gb|ACP07256.1| glycine cleavage system T protein [Vibrio cholerae M66-2]
gi|227014948|gb|ACP11157.1| glycine cleavage system T protein [Vibrio cholerae O395]
gi|229345266|gb|EEO10239.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae RC9]
gi|229353084|gb|EEO18024.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae B33]
gi|229356916|gb|EEO21834.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae BX 330286]
gi|229372530|gb|ACQ62952.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae MJ-1236]
gi|254846225|gb|EET24639.1| glycine cleavage system T protein [Vibrio cholerae MO10]
gi|255735674|gb|EET91072.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholera CIRS 101]
gi|262023463|gb|EEY42166.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae RC27]
gi|262028089|gb|EEY46748.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae INDRE 91/1]
gi|297542107|gb|EFH78158.1| glycine cleavage system T protein [Vibrio cholerae MAK 757]
gi|340039536|gb|EGR00509.1| glycine cleavage system T protein [Vibrio cholerae HCUF01]
gi|340045133|gb|EGR06081.1| glycine cleavage system T protein [Vibrio cholerae HC-49A2]
gi|341629824|gb|EGS54956.1| glycine cleavage system T protein [Vibrio cholerae HC-70A1]
gi|341630622|gb|EGS55602.1| glycine cleavage system T protein [Vibrio cholerae HC-40A1]
gi|341630662|gb|EGS55634.1| glycine cleavage system T protein [Vibrio cholerae HC-48A1]
gi|341635027|gb|EGS59756.1| glycine cleavage system T protein [Vibrio cholerae HFU-02]
gi|341644806|gb|EGS68973.1| glycine cleavage system T protein [Vibrio cholerae HC-38A1]
gi|356420704|gb|EHH74220.1| glycine cleavage system T protein [Vibrio cholerae HC-19A1]
gi|356426231|gb|EHH79551.1| glycine cleavage system T protein [Vibrio cholerae HC-06A1]
gi|356427070|gb|EHH80332.1| glycine cleavage system T protein [Vibrio cholerae HC-21A1]
gi|356430673|gb|EHH83878.1| glycine cleavage system T protein [Vibrio cholerae HC-23A1]
gi|356438204|gb|EHH91251.1| glycine cleavage system T protein [Vibrio cholerae HC-32A1]
gi|356439671|gb|EHH92637.1| glycine cleavage system T protein [Vibrio cholerae HC-22A1]
gi|356442411|gb|EHH95262.1| glycine cleavage system T protein [Vibrio cholerae HC-28A1]
gi|356442663|gb|EHH95499.1| glycine cleavage system T protein [Vibrio cholerae HC-33A2]
gi|356445817|gb|EHH98617.1| glycine cleavage system T protein [Vibrio cholerae HC-43A1]
gi|356454955|gb|EHI07602.1| glycine cleavage system T protein [Vibrio cholerae HC-61A1]
gi|356457588|gb|EHI10107.1| glycine cleavage system T protein [Vibrio cholerae HC-48B2]
gi|356648394|gb|AET28448.1| glycine cleavage system T protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|378796304|gb|AFC59774.1| glycine cleavage system T protein [Vibrio cholerae IEC224]
gi|395919434|gb|EJH30257.1| glycine cleavage system T protein [Vibrio cholerae CP1032(5)]
gi|395921682|gb|EJH32501.1| glycine cleavage system T protein [Vibrio cholerae CP1041(14)]
gi|395924515|gb|EJH35317.1| glycine cleavage system T protein [Vibrio cholerae CP1038(11)]
gi|395933154|gb|EJH43895.1| glycine cleavage system T protein [Vibrio cholerae CP1046(19)]
gi|395933566|gb|EJH44305.1| glycine cleavage system T protein [Vibrio cholerae CP1042(15)]
gi|395935040|gb|EJH45775.1| glycine cleavage system T protein [Vibrio cholerae CP1048(21)]
gi|395938518|gb|EJH49210.1| glycine cleavage system T protein [Vibrio cholerae HC-20A2]
gi|395947686|gb|EJH58341.1| glycine cleavage system T protein [Vibrio cholerae HC-46A1]
gi|395959424|gb|EJH69857.1| glycine cleavage system T protein [Vibrio cholerae HC-42A1]
gi|395968690|gb|EJH78624.1| glycine cleavage system T protein [Vibrio cholerae HC-57A2]
gi|395970801|gb|EJH80526.1| glycine cleavage system T protein [Vibrio cholerae CP1030(3)]
gi|395972162|gb|EJH81772.1| glycine cleavage system T protein [Vibrio cholerae CP1047(20)]
gi|395980321|gb|EJH89585.1| glycine cleavage system T protein [Vibrio cholerae HC-47A1]
gi|408008626|gb|EKG46587.1| glycine cleavage system T protein [Vibrio cholerae HC-41A1]
gi|408015046|gb|EKG52646.1| glycine cleavage system T protein [Vibrio cholerae HC-39A1]
gi|408040026|gb|EKG76254.1| glycine cleavage system T protein [Vibrio cholerae CP1037(10)]
gi|408049253|gb|EKG84497.1| glycine cleavage system T protein [Vibrio Cholerae CP1044(17)]
gi|408050051|gb|EKG85227.1| glycine cleavage system T protein [Vibrio cholerae CP1050(23)]
gi|408060728|gb|EKG95358.1| glycine cleavage system T protein [Vibrio cholerae HC-81A2]
gi|408613503|gb|EKK86792.1| glycine cleavage system T protein [Vibrio cholerae CP1033(6)]
gi|408619584|gb|EKK92608.1| glycine cleavage system T protein [Vibrio cholerae HC-17A1]
gi|408639141|gb|EKL10978.1| glycine cleavage system T protein [Vibrio cholerae HC-50A2]
gi|408652736|gb|EKL23934.1| glycine cleavage system T protein [Vibrio cholerae HC-62A1]
gi|408663788|gb|EKL34640.1| glycine cleavage system T protein [Vibrio cholerae HC-77A1]
gi|408854121|gb|EKL93887.1| glycine cleavage system T protein [Vibrio cholerae HC-37A1]
gi|408854129|gb|EKL93894.1| glycine cleavage system T protein [Vibrio cholerae HC-17A2]
gi|408877642|gb|EKM16686.1| glycine cleavage system T protein [Vibrio cholerae HC-69A1]
gi|408879689|gb|EKM18644.1| glycine cleavage system T protein [Vibrio cholerae HC-62B1]
gi|439973424|gb|ELP49652.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae 4260B]
gi|443430289|gb|ELS72864.1| glycine cleavage system T protein [Vibrio cholerae HC-64A1]
gi|443434125|gb|ELS80288.1| glycine cleavage system T protein [Vibrio cholerae HC-65A1]
gi|443437955|gb|ELS87689.1| glycine cleavage system T protein [Vibrio cholerae HC-67A1]
gi|443442065|gb|ELS95382.1| glycine cleavage system T protein [Vibrio cholerae HC-68A1]
gi|443446058|gb|ELT02732.1| glycine cleavage system T protein [Vibrio cholerae HC-71A1]
gi|443452493|gb|ELT12680.1| glycine cleavage system T protein [Vibrio cholerae HC-72A2]
gi|443459836|gb|ELT27230.1| glycine cleavage system T protein [Vibrio cholerae HC-7A1]
gi|443463908|gb|ELT34861.1| glycine cleavage system T protein [Vibrio cholerae HC-80A1]
gi|443467643|gb|ELT42299.1| glycine cleavage system T protein [Vibrio cholerae HC-81A1]
gi|448263702|gb|EMB00943.1| Aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae O1 str. Inaba G4222]
Length = 376
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLIGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|153827552|ref|ZP_01980219.1| glycine cleavage system T protein [Vibrio cholerae MZO-2]
gi|149738485|gb|EDM52881.1| glycine cleavage system T protein [Vibrio cholerae MZO-2]
Length = 376
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTGFEEVEWIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTGFEEVEWIGLGARDSL 231
>gi|417822573|ref|ZP_12469171.1| glycine cleavage system T protein [Vibrio cholerae HE48]
gi|340048703|gb|EGR09619.1| glycine cleavage system T protein [Vibrio cholerae HE48]
Length = 376
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLFE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 INGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLFEINGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|261212793|ref|ZP_05927077.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. RC341]
gi|260837858|gb|EEX64535.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
sp. RC341]
Length = 376
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHAALGSEVFAEVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|229527754|ref|ZP_04417145.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae 12129(1)]
gi|229334116|gb|EEN99601.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae 12129(1)]
Length = 376
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|153217258|ref|ZP_01951022.1| glycine cleavage system T protein [Vibrio cholerae 1587]
gi|124113713|gb|EAY32533.1| glycine cleavage system T protein [Vibrio cholerae 1587]
Length = 376
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSNEHATLGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|421350000|ref|ZP_15800369.1| glycine cleavage system T protein [Vibrio cholerae HE-25]
gi|395956617|gb|EJH67211.1| glycine cleavage system T protein [Vibrio cholerae HE-25]
Length = 376
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGF GA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFLGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|229522959|ref|ZP_04412373.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae TM 11079-80]
gi|421352634|ref|ZP_15802984.1| glycine cleavage system T protein [Vibrio cholerae HE-45]
gi|422308798|ref|ZP_16395938.1| glycine cleavage system T protein [Vibrio cholerae CP1035(8)]
gi|229340176|gb|EEO05184.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae TM 11079-80]
gi|395957309|gb|EJH67871.1| glycine cleavage system T protein [Vibrio cholerae HE-45]
gi|408616168|gb|EKK89328.1| glycine cleavage system T protein [Vibrio cholerae CP1035(8)]
Length = 376
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHATLGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|114768870|ref|ZP_01446496.1| probable aminomethyltransferase (glycine cleavage system t protein)
[Rhodobacterales bacterium HTCC2255]
gi|114549787|gb|EAU52668.1| probable aminomethyltransferase (glycine cleavage system t protein)
[Rhodobacterales bacterium HTCC2255]
Length = 397
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 16/238 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LYDLH+S G KMVPFAG+ MPVQY + H+HTR++V +FDVSHM Q ++ K+
Sbjct: 25 QTALYDLHISLGAKMVPFAGYEMPVQY-PTGVMKEHIHTRNEVGLFDVSHMGQVIIKPKN 83
Query: 258 RE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
LE + D+ +L TN+ GGI DDL+V+ D LFLV NA
Sbjct: 84 GNLSDIAASLEKLIPIDIIDLPKYHQRYGFLTNKHGGIIDDLMVSNQ-GDHLFLVINAGC 142
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+K D++ + +L + L+ L E R LIA+QGP + +L + ++ + ++FM
Sbjct: 143 KKTDVEHLR------DNLDDNCELELL--ENRSLIALQGPKAEKVLSKFSN-QIIDMFFM 193
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + G ++R+GYTGEDG EIS+P + E LL EDV GLGARDSL
Sbjct: 194 DTLKVQLQGFEVWISRSGYTGEDGFEISIPNDNIIEFTEQLLEIEDVLPIGLGARDSL 251
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L + L+ L E R LIA+QGP + +L + ++ + ++FM + + G ++R
Sbjct: 153 NLDDNCELELL--ENRSLIALQGPKAEKVLSKFSN-QIIDMFFMDTLKVQLQGFEVWISR 209
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EIS+P + E LL EDV GLGARDSL
Sbjct: 210 SGYTGEDGFEISIPNDNIIEFTEQLLEIEDVLPIGLGARDSL 251
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 13 KRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQR-VGA 65
K+RR +G F G+ I ++I +G KR G G P+R G E+F + ND +G
Sbjct: 281 KKRRASGTRSGNFLGSERILNEISNGTDIKRVGIVPIGRAPMREGVELFKDRNDTIPIGK 340
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG P +++ I+MGY++ Y+KV +++ +R KR++ VT +PF K N+
Sbjct: 341 VTSGGFGPIVERAISMGYLDTRYTKVNTKIFAEIRGKRMEAVVTSLPFTKLNF 393
>gi|229526103|ref|ZP_04415507.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae bv. albensis VL426]
gi|254225953|ref|ZP_04919554.1| glycine cleavage system T protein [Vibrio cholerae V51]
gi|417819029|ref|ZP_12465649.1| glycine cleavage system T protein [Vibrio cholerae HE39]
gi|422910840|ref|ZP_16945469.1| glycine cleavage system T protein [Vibrio cholerae HE-09]
gi|423939086|ref|ZP_17732568.1| glycine cleavage system T protein [Vibrio cholerae HE-40]
gi|423969878|ref|ZP_17736116.1| glycine cleavage system T protein [Vibrio cholerae HE-46]
gi|125621487|gb|EAZ49820.1| glycine cleavage system T protein [Vibrio cholerae V51]
gi|229336261|gb|EEO01279.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae bv. albensis VL426]
gi|340043743|gb|EGR04701.1| glycine cleavage system T protein [Vibrio cholerae HE39]
gi|341632900|gb|EGS57752.1| glycine cleavage system T protein [Vibrio cholerae HE-09]
gi|408664119|gb|EKL34960.1| glycine cleavage system T protein [Vibrio cholerae HE-40]
gi|408667149|gb|EKL37902.1| glycine cleavage system T protein [Vibrio cholerae HE-46]
Length = 376
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|288958429|ref|YP_003448770.1| aminomethyltransferase [Azospirillum sp. B510]
gi|288910737|dbj|BAI72226.1| aminomethyltransferase [Azospirillum sp. B510]
Length = 370
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 142/240 (59%), Gaps = 11/240 (4%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+ +A + TPL+ LH+ G +MVPFAG+ MPVQY + I H HTR K +FDVSHM Q
Sbjct: 3 EAATALKTTPLHALHVELGARMVPFAGYDMPVQY-PLGILKEHQHTREKAGLFDVSHMGQ 61
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+TG LE++ D+ L G+ +LF NEQGGI DDL+VT D LFLV NA
Sbjct: 62 VRLTGADPAAVLETLVPGDITGLAQGRMRYTLFLNEQGGILDDLMVTNG-GDHLFLVVNA 120
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ ++ D+ A R K GK ++ ++ L+A+QGPL++ ++ R + + +
Sbjct: 121 ACKEQDV-----AHLREKLAGK---VEVELLDDLALMALQGPLAAEVMARFVP-EAAGMK 171
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM+ + G+P LTR+GYTGEDG EIS I ALL++ +V+ GLGARDSL
Sbjct: 172 FMSCLSASFKGVPVILTRSGYTGEDGYEISCDKADAEMIARALLAEAEVEAIGLGARDSL 231
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR GGFPG II Q+ G +R+R G G P R EI +AN R+G ITSG
Sbjct: 261 KRRRAEGGFPGYDIIHRQLTGGATRRRVGIQPDGRQPAREHTEIQDANGNRIGEITSGGF 320
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P+ +AMGY++ A++ + L + VR K + +V PFV YY
Sbjct: 321 GPTAGAPVAMGYVDIAHAALDTPLTLVVRGKPLPARVAATPFVPQRYY 368
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 475 QGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHI 534
QGPL++ ++ R + + + FM+ + G+P LTR+GYTGEDG EIS I
Sbjct: 152 QGPLAAEVMARFVP-EAAGMKFMSCLSASFKGVPVILTRSGYTGEDGYEISCDKADAEMI 210
Query: 535 VEALLSDEDVKLAGLGARDSL 555
ALL++ +V+ GLGARDSL
Sbjct: 211 ARALLAEAEVEAIGLGARDSL 231
>gi|426411181|ref|YP_007031280.1| glycine cleavage system T protein [Pseudomonas sp. UW4]
gi|426269398|gb|AFY21475.1| glycine cleavage system T protein [Pseudomonas sp. UW4]
Length = 374
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + LE++ D+ +L G ++FTN GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGADAAKALETLVPVDIIDLPVGMQRYAMFTNATGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G+ ++ L EER L+A+QGP + T+L+R ++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGEQCTIEPLF-EERALLALQGPAAVTVLERLAP-TVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAEALARALLAEPEVAAIGLGARDSL 231
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGDIIGSVCSGGFGPTLGGPLAMGYVDSAYIALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L+R ++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLERLAP-TVAKMTFMQFARVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAANAEALARALLAEPEVAAIGLGARDSL 231
>gi|424642486|ref|ZP_18080318.1| glycine cleavage system T protein [Vibrio cholerae HC-56A2]
gi|395968726|gb|EJH78656.1| glycine cleavage system T protein [Vibrio cholerae HC-56A2]
Length = 376
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LHPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLIGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LHPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSL 231
>gi|260944506|ref|XP_002616551.1| hypothetical protein CLUG_03792 [Clavispora lusitaniae ATCC 42720]
gi|238850200|gb|EEQ39664.1| hypothetical protein CLUG_03792 [Clavispora lusitaniae ATCC 42720]
Length = 364
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 140/244 (57%), Gaps = 18/244 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLY+ H+ +G K VP+AGF MP+ Y S SH RSKV +FDVSHMLQ G
Sbjct: 16 RTPLYESHVKYGAKFVPYAGFEMPIMYKDQSHIESHNWVRSKVGLFDVSHMLQHRFHGAD 75
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
++L+ I D+ +L P +LS+ N +GGI DD I+TK ED ++V+NA R+ D+
Sbjct: 76 AVKFLQKITPIDLSQLQPFTSSLSVLLNNEGGIIDDTIITKHGEDKFYMVTNAGCREKDL 135
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ +D K+ + H F E L+AVQGP + +++Q+ T+ DLS + F ++
Sbjct: 136 AFI---RDELKNFDQVHHQTF----EGTLLAVQGPAAGSLMQKLTNEDLSKITFGQTQFL 188
Query: 378 TIAGI---PCTLTRAGYTGEDGVEISVP------GEQCTHIVEALLSD--EDVKLAGLGA 426
+ + L+R GYTGEDG E+S+P +Q EAL+ + E V+ GL A
Sbjct: 189 KLNSLIDSDIHLSRTGYTGEDGFELSIPSTNDKEAKQARQFFEALIDENPELVRPIGLAA 248
Query: 427 RDSL 430
RDSL
Sbjct: 249 RDSL 252
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 437 NTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYF 496
N L D K+ + H F E L+AVQGP + +++Q+ T+ DLS + F
Sbjct: 127 NAGCREKDLAFIRDELKNFDQVHHQTF----EGTLLAVQGPAAGSLMQKLTNEDLSKITF 182
Query: 497 MTSRPCTIAGI---PCTLTRAGYTGEDGVEISVP------GEQCTHIVEALLSD--EDVK 545
++ + + L+R GYTGEDG E+S+P +Q EAL+ + E V+
Sbjct: 183 GQTQFLKLNSLIDSDIHLSRTGYTGEDGFELSIPSTNDKEAKQARQFFEALIDENPELVR 242
Query: 546 LAGLGARDSL 555
GL ARDSL
Sbjct: 243 PIGLAARDSL 252
>gi|408395004|gb|EKJ74192.1| hypothetical protein FPSE_05631 [Fusarium pseudograminearum CS3096]
Length = 440
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 147/259 (56%), Gaps = 23/259 (8%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
G S S ++TPLYD H+++GGK+VPFAG+S+PVQY +S+ SH TR S+FDVSHM+
Sbjct: 40 GGSSSDLKKTPLYDFHIANGGKLVPFAGYSLPVQYSGLSLAQSHHFTREHASLFDVSHMV 99
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLF-TNEQGGIQDDLIVTKTLEDSLFLVS 308
Q + GK +LE + +D + L+ F GGI DD +VT+ ED+ ++V+
Sbjct: 100 QHIFKGKDAAAFLEKVTPSDWTNQGNMQSKLTTFLWPNTGGIVDDSVVTRIGEDTYYVVT 159
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDL 366
N + D + ++ G D+ Q+ + GL+A+QGP S+ +L +D+DL
Sbjct: 160 NGACLDKDTKYI---DEQLGKFGGDV--QWTRLDNSGLVALQGPQSAEVLNEVLASDVDL 214
Query: 367 SSLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPG------EQCTHIVEALL 414
+ LYF + + P ++R GYTGEDG EIS G E T +++L+
Sbjct: 215 TKLYFGNAVWAELKLSDGSKTHPVLISRGGYTGEDGFEISFNGKDYPAFETTTPAIQSLM 274
Query: 415 SD---EDVKLAGLGARDSL 430
S E ++LAGLGARDSL
Sbjct: 275 SKAGPERLQLAGLGARDSL 293
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 15 RRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITS 68
RRE+GGF GA I Q+ SGV R+R G G P R G EI + + +++G ITS
Sbjct: 325 RRESGGFHGAETIIPQLTPKSKGGSGVERRRIGLYVDGAPAREGAEI-HKDGEKIGVITS 383
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G PSP+L KNIAMGYI+ K G E+ V VR K VTKMPF+++ Y+
Sbjct: 384 GVPSPTLGKNIAMGYIKSGNQKAGTEVDVVVRGKARKGTVTKMPFIQTKYW 434
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 19/127 (14%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCT 503
K +++ G D+ Q+ + GL+A+QGP S+ +L +D+DL+ LYF +
Sbjct: 169 KYIDEQLGKFGGDV--QWTRLDNSGLVALQGPQSAEVLNEVLASDVDLTKLYFGNAVWAE 226
Query: 504 IA------GIPCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLSD---EDVKLAG 548
+ P ++R GYTGEDG EIS G E T +++L+S E ++LAG
Sbjct: 227 LKLSDGSKTHPVLISRGGYTGEDGFEISFNGKDYPAFETTTPAIQSLMSKAGPERLQLAG 286
Query: 549 LGARDSL 555
LGARDSL
Sbjct: 287 LGARDSL 293
>gi|46108538|ref|XP_381327.1| hypothetical protein FG01151.1 [Gibberella zeae PH-1]
Length = 440
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 147/259 (56%), Gaps = 23/259 (8%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
G S S ++TPLYD H+++GGK+VPFAG+S+PVQY +S+ SH TR S+FDVSHM+
Sbjct: 40 GGSSSDLKKTPLYDFHIANGGKLVPFAGYSLPVQYSGLSLAQSHHFTREHASLFDVSHMV 99
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLF-TNEQGGIQDDLIVTKTLEDSLFLVS 308
Q + GK +LE + +D + L+ F GGI DD +VT+ ED+ ++V+
Sbjct: 100 QHIFKGKDAAAFLEKVTPSDWTNQGNMQSKLTTFLWPNTGGIVDDSVVTRIGEDTYYVVT 159
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDL 366
N + D + ++ G D+ Q+ + GL+A+QGP S+ +L +D+DL
Sbjct: 160 NGACLDKDTKYI---DEQLGKFGGDV--QWTRLDNSGLVALQGPQSAEVLNEVLASDVDL 214
Query: 367 SSLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPG------EQCTHIVEALL 414
+ LYF + + P ++R GYTGEDG EIS G E T +++L+
Sbjct: 215 TKLYFGNAVWAELKLSDGSKTHPVLISRGGYTGEDGFEISFNGKDYPAFETTTPAIQSLM 274
Query: 415 SD---EDVKLAGLGARDSL 430
S E ++LAGLGARDSL
Sbjct: 275 SKAGPERLQLAGLGARDSL 293
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 15 RRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITS 68
RRE+GGF GA I Q+ SGV R+R G G P R G EI + + +++G ITS
Sbjct: 325 RRESGGFHGAETIIPQLTPKSKGGSGVERRRIGLYVDGAPAREGAEI-HKDGEKIGVITS 383
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G PSP+L KNIAMGYI+ K G E+ V VR K VTKMPF+++ Y+
Sbjct: 384 GVPSPTLGKNIAMGYIKSGNQKAGTEVDVVVRGKARKGTVTKMPFIQTKYW 434
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 19/127 (14%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCT 503
K +++ G D+ Q+ + GL+A+QGP S+ +L +D+DL+ LYF +
Sbjct: 169 KYIDEQLGKFGGDV--QWTRLDNSGLVALQGPQSAEVLNEVLASDVDLTKLYFGNAVWAE 226
Query: 504 IA------GIPCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLSD---EDVKLAG 548
+ P ++R GYTGEDG EIS G E T +++L+S E ++LAG
Sbjct: 227 LKLSDGSKTHPVLISRGGYTGEDGFEISFNGKDYPAFETTTPAIQSLMSKAGPERLQLAG 286
Query: 549 LGARDSL 555
LGARDSL
Sbjct: 287 LGARDSL 293
>gi|398955913|ref|ZP_10676660.1| glycine cleavage system T protein [Pseudomonas sp. GM33]
gi|398150379|gb|EJM38972.1| glycine cleavage system T protein [Pseudomonas sp. GM33]
Length = 374
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + LE++ D+ +L G ++FTN GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGVDAAKALETLVPVDIIDLPVGMQRYAMFTNATGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G+ ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGEQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAEALARALLAEPEVAAIGLGARDSL 231
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGDIIGSVCSGGFGPTLGGPLAMGYVDSAYIALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFARVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAANAEALARALLAEPEVAAIGLGARDSL 231
>gi|347761671|ref|YP_004869232.1| glycine cleavage system T protein [Gluconacetobacter xylinus NBRC
3288]
gi|347580641|dbj|BAK84862.1| glycine cleavage system T protein [Gluconacetobacter xylinus NBRC
3288]
Length = 377
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 137/238 (57%), Gaps = 16/238 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLYDLHL G +MVPFAG+ MPVQY A +T HLHTR++ +FDVSHM Q + +
Sbjct: 7 RTPLYDLHLELGARMVPFAGYEMPVQYPAGVMT-EHLHTRAQAGLFDVSHMGQVRIRTQS 65
Query: 258 RE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
+ LE++ AD+ L PG+ ++FT GGI DDL+V + + L LV NA+
Sbjct: 66 SQVADAARALEALVPADIVALKPGRQRYAVFTTPDGGISDDLMVAN-MGEWLLLVVNAAC 124
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
++ D + K+L + ++ L E R LIA+QGP + L + +++ FM
Sbjct: 125 KQADFAHV------HKALSQTCMVEML--EGRALIALQGPAAEAALA-SLNPGAATMRFM 175
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ C ++R+GYTGEDG EI + + ALL+ V AGLGARDSL
Sbjct: 176 DVAELELAGVSCIVSRSGYTGEDGYEIGMADNDAVTVARALLTCPGVAPAGLGARDSL 233
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAIT 67
PG R GG+PGA+I+ Q+ G +R+R G + G P+R G E+F VG +T
Sbjct: 267 PGGAR--AGGYPGAAIVADQLTDGTTRRRVGLRAEGRAPVRGGTELFADEVGTTPVGRVT 324
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SG PS+ +AMGY+ ++ G L+ VR + + V+V+ +PFV +
Sbjct: 325 SGAFGPSVGGPVAMGYVAADHAGTGTRLFASVRGRLLPVQVSALPFVAPTF 375
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K+L + ++ L E R LIA+QGP + L + +++ FM +AG+ C ++
Sbjct: 134 KALSQTCMVEML--EGRALIALQGPAAEAALA-SLNPGAATMRFMDVAELELAGVSCIVS 190
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EI + + ALL+ V AGLGARDSL
Sbjct: 191 RSGYTGEDGYEIGMADNDAVTVARALLTCPGVAPAGLGARDSL 233
>gi|398804620|ref|ZP_10563612.1| glycine cleavage system T protein [Polaromonas sp. CF318]
gi|398093439|gb|EJL83821.1| glycine cleavage system T protein [Polaromonas sp. CF318]
Length = 386
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 135/243 (55%), Gaps = 13/243 (5%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++P +TPL+ LH+ G +MVPFAG+SMPVQY A + A H HTR +FDVSHM Q
Sbjct: 9 AAPETLLKTPLHALHVELGARMVPFAGYSMPVQYPA-GLMAEHHHTRQAAGLFDVSHMGQ 67
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK---TLEDSLFLV 307
+ G LES+ DV +L GK L N++GGI DDL+ LF++
Sbjct: 68 LRLVGADAAAALESLIPVDVLDLPAGKQRYGLLLNDEGGIIDDLMFFNRDYANGGDLFVI 127
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLS 367
N + + D+ + A +G Q + E L+A+QGP + T LQR +
Sbjct: 128 VNGACKVGDIAHIQA------KIGA--RCQVIPMPEMALLALQGPQAVTALQRLAP-GVE 178
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
L FMT T+AG C LTR+GYTGEDG EISV G Q + ALL+ +VK GLGAR
Sbjct: 179 KLVFMTGGRFTVAGCDCFLTRSGYTGEDGFEISVHGSQAETLARALLAQPEVKPIGLGAR 238
Query: 428 DSL 430
+SL
Sbjct: 239 NSL 241
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
Q + E L+A+QGP + T LQR + L FMT T+AG C LTR+GYTGEDG
Sbjct: 149 QVIPMPEMALLALQGPQAVTALQRLAP-GVEKLVFMTGGRFTVAGCDCFLTRSGYTGEDG 207
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISV G Q + ALL+ +VK GLGAR+SL
Sbjct: 208 FEISVHGSQAETLARALLAQPEVKPIGLGARNSL 241
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIK--SGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA I +Q+ + ++RKR G + VP+R E+ + + ++G +TSG P+
Sbjct: 280 AGGFPGADKILAQLADPATLARKRVGLVALERVPVRDHTELQSTDGTKIGEVTSGLLGPT 339
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ + +AMGY++P ++ +G + VR K V ++V MPFV + YY
Sbjct: 340 INQPVAMGYVKPEFAALGTRVNAIVRGKAVPMEVAAMPFVPNRYY 384
>gi|169608321|ref|XP_001797580.1| hypothetical protein SNOG_07231 [Phaeosphaeria nodorum SN15]
gi|111064762|gb|EAT85882.1| hypothetical protein SNOG_07231 [Phaeosphaeria nodorum SN15]
Length = 457
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 142/252 (56%), Gaps = 10/252 (3%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S G+ RT LY+LH +G K V F G+SMPVQY +SI SH TR K S+FDV H
Sbjct: 58 SSGAGKEELGRTGLYELHSKYGAKFVGFGGYSMPVQYSDLSIVDSHNWTREKASLFDVGH 117
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFL 306
M+Q +G E +LE + + + L + TLS L GGI DD ++ + L D ++
Sbjct: 118 MVQHHFSGPGAEAFLERVTPSSLSTLPVQQSTLSTLLHPNTGGIVDDTVIAR-LSDKFYV 176
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD--- 363
V+NA R+ D +KS D +++ + +GLIA+QGPLS+ IL R D
Sbjct: 177 VTNAGCREKDTAYFKEQLQAWKSANPDKPVEWNILDGQGLIALQGPLSAEILSRVLDDKS 236
Query: 364 -LDLSSLYFMTSRPCTIAG--IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDED 418
DL SLYF T+ G + ++RAGYTGEDG EIS+P I + LL + ++
Sbjct: 237 KADLKSLYFGQCTFATVKGTDVEVLVSRAGYTGEDGFEISIPSAATEAITQFLLDSAKDE 296
Query: 419 VKLAGLGARDSL 430
++ AGLGARD+L
Sbjct: 297 LRFAGLGARDTL 308
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 72/121 (59%), Gaps = 5/121 (4%)
Query: 12 GKRRRETGGFPGASIIQSQIKS-----GVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
GK RR GGF G S+I Q+K GVSR+R G G P R G EI N +++G I
Sbjct: 337 GKDRRANGGFHGDSVILQQLKKKSEGGGVSRRRIGLIVEGSPAREGAEIVNEAGEKIGNI 396
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRK 126
TSGCPSP+LKKNI+MGYI+ K G E+ V VR K+ V KMPFV S Y+ P K
Sbjct: 397 TSGCPSPTLKKNISMGYIKDGLHKAGTEVEVVVRGKKRKAVVAKMPFVPSKYHKQPTTAK 456
Query: 127 V 127
Sbjct: 457 A 457
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 8/112 (7%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD----LDLSSLYFMTSRPCTIAG- 506
+KS D +++ + +GLIA+QGPLS+ IL R D DL SLYF T+ G
Sbjct: 197 WKSANPDKPVEWNILDGQGLIALQGPLSAEILSRVLDDKSKADLKSLYFGQCTFATVKGT 256
Query: 507 -IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
+ ++RAGYTGEDG EIS+P I + LL + ++++ AGLGARD+L
Sbjct: 257 DVEVLVSRAGYTGEDGFEISIPSAATEAITQFLLDSAKDELRFAGLGARDTL 308
>gi|91787747|ref|YP_548699.1| glycine cleavage system T protein [Polaromonas sp. JS666]
gi|91696972|gb|ABE43801.1| glycine cleavage system T protein [Polaromonas sp. JS666]
Length = 398
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 138/246 (56%), Gaps = 16/246 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++P +TPL+DLH+ G +MVPFAG+SMPVQY A + A H HTR +FDVSHM Q
Sbjct: 17 ATPEDLLKTPLHDLHVELGARMVPFAGYSMPVQYPA-GLMAEHHHTRQAAGLFDVSHMGQ 75
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIV-TKTLEDS-----L 304
+ G LE++ DV +L GK L N+ GGI DDL+ + + DS L
Sbjct: 76 LRLVGPDSAAALETLLPVDVIDLPAGKQRYGLLLNDDGGIIDDLMFFNRNMHDSANGGDL 135
Query: 305 FLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL 364
FL+ N + + D+ + Q + S + + E L+A+QGP + T LQR
Sbjct: 136 FLIVNGACKVGDIAHI---QQKIGS-----RCEVIPMPEMALMALQGPQAVTALQRLAP- 186
Query: 365 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
+ L FMT T+AG C +TR+GYTGEDG EISV Q + ALL+ +VK GL
Sbjct: 187 GVDKLVFMTGGRFTVAGCDCFITRSGYTGEDGFEISVHESQADTLARALLAQSEVKPVGL 246
Query: 425 GARDSL 430
GAR+SL
Sbjct: 247 GARNSL 252
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E L+A+QGP + T LQR + L FMT T+AG C +TR+GYTGEDG EISV
Sbjct: 166 EMALMALQGPQAVTALQRLAP-GVDKLVFMTGGRFTVAGCDCFITRSGYTGEDGFEISVH 224
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
Q + ALL+ +VK GLGAR+SL
Sbjct: 225 ESQADTLARALLAQSEVKPVGLGARNSL 252
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 18 TGGFPGASIIQSQIK---SGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSP 73
GGFPGA I +Q+ + ++RKR G + VP+R E+ + +G +TSG P
Sbjct: 291 AGGFPGAEKILAQLADPAATLTRKRVGLVALERVPVRDHTELQSTAGAPIGQVTSGLLGP 350
Query: 74 SLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++ + +AMGY+ P ++ +G + VR K V ++V MPFV ++YY
Sbjct: 351 TINQPVAMGYVSPEFAAIGTRIHALVRGKPVPMEVAAMPFVPNHYY 396
>gi|390475044|ref|XP_003734891.1| PREDICTED: aminomethyltransferase, mitochondrial [Callithrix
jacchus]
Length = 347
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 119/185 (64%), Gaps = 10/185 (5%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKICGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
A + D+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL
Sbjct: 90 AGCWEKDLALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDL 143
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
L FMTS + G+ C +TR GYTGEDGVEISVP H+ ALL D +VKLAGL
Sbjct: 144 RKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLQDPEVKLAGLA 203
Query: 426 ARDSL 430
ARDSL
Sbjct: 204 ARDSL 208
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTMIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPSLKKNVAMGYVPCEYSRPGTKLMVEVRRKQQMAVVSKMPFVPTNYYT 345
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL D +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLQDPEVKLAGLAARDSL 208
>gi|295667902|ref|XP_002794500.1| aminomethyltransferase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285916|gb|EEH41482.1| aminomethyltransferase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 490
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 149/260 (57%), Gaps = 25/260 (9%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A ++T LYDLH++H KM PFAG+SMP+QY +S SH TR+K S+FDVSHM+Q +
Sbjct: 83 ALKKTQLYDLHITHKAKMGPFAGYSMPLQYADLSHIESHHWTRTKASLFDVSHMVQHHIR 142
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKTLEDSLFLVSNASRR 313
G + L + + ++ L + TLS +E+ GGI DD ++T+ +S ++V+NA RR
Sbjct: 143 GPGALDLLMKVTPSSLNLLHDNRSTLSCLLDEKTGGIIDDTVITRLGPESFYVVTNAGRR 202
Query: 314 KVDMDLMVAAQDRFKS----LGKDIHLQFLSAEERGLIAVQGPLSSTILQR-------HT 362
K D++ + D F+ ++ + + + R L+A+QGP S+ +LQ
Sbjct: 203 KEDLEFLQKEIDEFRQSHDPSSRESVINWSILDSRALVALQGPSSAAVLQSLITPGEASI 262
Query: 363 DLDLSSLYFMTSRPCTIAGIP--------CTLTRAGYTGEDGVEISVPGEQCTH----IV 410
D DLS+L+F SR + +P ++R GYTGEDG EIS+P + +
Sbjct: 263 DSDLSTLHFGQSRSLHL-NLPDGTHTPSRLLISRTGYTGEDGFEISIPTDNDPQLPIKVT 321
Query: 411 EALLSDEDVKLAGLGARDSL 430
E LS+ +V+LAGL RDSL
Sbjct: 322 ELFLSNPEVRLAGLAVRDSL 341
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAND--Q 61
GK RR+ F GA++I Q++S + +R G T G P R G I + D
Sbjct: 370 GKDRRDPSSPASSFNGAAVILPQLESPAKTLKERRVGLTIEAGPPAREGVPIVDIADGTT 429
Query: 62 RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+VG +TSG PSP+L NIAMGY++ K G E+ V VR K VT MPFV + +Y
Sbjct: 430 QVGVVTSGLPSPTLGGTNIAMGYVKQGLHKKGTEVGVLVRKKLRKATVTPMPFVPNKFY 488
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 20/108 (18%)
Query: 467 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTIAGIP--------CTL 511
+ R L+A+QGP S+ +LQ D DLS+L+F SR + +P +
Sbjct: 235 DSRALVALQGPSSAAVLQSLITPGEASIDSDLSTLHFGQSRSLHL-NLPDGTHTPSRLLI 293
Query: 512 TRAGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
+R GYTGEDG EIS+P + + E LS+ +V+LAGL RDSL
Sbjct: 294 SRTGYTGEDGFEISIPTDNDPQLPIKVTELFLSNPEVRLAGLAVRDSL 341
>gi|424913825|ref|ZP_18337189.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392850001|gb|EJB02522.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 378
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 19/243 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHL G +MVPFAG+ MPVQY A + H+HTR++ +FDVSHM Q +V
Sbjct: 5 AALKKTPLHALHLQLGARMVPFAGYDMPVQYPA-GVMKEHIHTRTEAGLFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ G I DDL++T L+D LF+V
Sbjct: 64 KAKSGSYEDAALALESLVPVDILGLAEGRQRYGFFTDDSGCILDDLMITH-LDDHLFVVV 122
Query: 309 NASRRKVDM-DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLS 367
NAS ++ D+ L DR DI L R LIA+QGP + +L D++
Sbjct: 123 NASCKEADLAHLQTHIGDRC-----DITLL-----NRALIALQGPRAVEVLAELW-ADVA 171
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
++ FM R C + + C ++R+GY+GEDG EIS+P ++ + LL DV+ GLGAR
Sbjct: 172 AMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPADKAEDVTMRLLEHPDVQAIGLGAR 231
Query: 428 DSL 430
DSL
Sbjct: 232 DSL 234
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 148 NRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 207 ADKAEDVTMRLLEHPDVQAIGLGARDSL 234
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPG+ I S++ +G +R+R G G P+R +++ + + +G +TSG PS
Sbjct: 273 AGGFPGSGRILSELDNGAARRRVGLKPEGKAPVRGHAKLYADAEGKAEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G ++ VR K + + V+ +PFV Y
Sbjct: 333 VEGPVAMGYVPVSHAAAGTLVYAEVRGKYLPITVSALPFVTPTY 376
>gi|339505041|ref|YP_004692461.1| glycine cleavage T-protein GcvT [Roseobacter litoralis Och 149]
gi|338759034|gb|AEI95498.1| glycine cleavage T-protein GcvT [Roseobacter litoralis Och 149]
Length = 374
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 137/239 (57%), Gaps = 18/239 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL++LH KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q +++G
Sbjct: 5 KRTPLFELHAELSAKMVPFAGYEMPVQY-PMGVMKEHLHTRGHAGLFDVSHMGQVLLSGP 63
Query: 257 HREE---WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
E E + DV L G+ FTNE GGI+DDL+ + DSLF+V NA +
Sbjct: 64 SWEAVALAFEVLVPMDVLGLADGRQRYGFFTNEAGGIEDDLMFARR-GDSLFVVINAGCK 122
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD--LSSLYF 371
D+ LM A L DI L LS +R LIA+QGP + +++ T LD ++ F
Sbjct: 123 DADLALMRA------GLPDDITLSELS--DRALIALQGPAAGSVI---TSLDERAEAMRF 171
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M S ++ G +R+GYTGEDG EISV ++ + L++D +V GLGARDSL
Sbjct: 172 MDSCELSLCGHAVWASRSGYTGEDGFEISVQADEAVSLARRLINDAEVAPIGLGARDSL 230
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 13 KRRRE----TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGA 65
K RR+ GGFPG+ I ++ G + KR G G P+R G +F + ++G+
Sbjct: 260 KVRRQGGARAGGFPGSEAIFDEMAGGPATKRVGLRPEGRAPMRQGVALFATAEGGAQIGS 319
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG PS++ IAMGY++ ++ G LW VR KR+ V+V +PFV + +
Sbjct: 320 VTSGGFGPSVQGPIAMGYVDTDFATTGTALWGEVRGKRMGVEVVDLPFVPAGF 372
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLD--LSSLYFMTSRPCTIAGIPCTLTRAG 515
DI L LS +R LIA+QGP + +++ T LD ++ FM S ++ G +R+G
Sbjct: 136 DITLSELS--DRALIALQGPAAGSVI---TSLDERAEAMRFMDSCELSLCGHAVWASRSG 190
Query: 516 YTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
YTGEDG EISV ++ + L++D +V GLGARDSL
Sbjct: 191 YTGEDGFEISVQADEAVSLARRLINDAEVAPIGLGARDSL 230
>gi|347540021|ref|YP_004847446.1| glycine cleavage system T protein, aminomethyltransferase
[Pseudogulbenkiania sp. NH8B]
gi|345643199|dbj|BAK77032.1| glycine cleavage system T protein, aminomethyltransferase
[Pseudogulbenkiania sp. NH8B]
Length = 374
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLY LH+ G KMVPFAG+ MPVQY + I H HTR+ +FDVSHM Q + G
Sbjct: 9 RTPLYALHVELGAKMVPFAGYEMPVQY-PLGILKEHQHTRAAAGLFDVSHMGQVKLIGAE 67
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ DV +L G +LFTN+ GGI DDL+V L++V NA+ +
Sbjct: 68 AAAALETLVPIDVIDLPVGLQRYALFTNDDGGILDDLMVANFGGGVLYVVVNAACK---- 123
Query: 318 DLMVAAQDRFKSLGKDIH-LQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
AQD K H + + +R L+A+QGP ++T+L RH ++ L FM
Sbjct: 124 -----AQDIAHLKSKIGHRCEVVELNDRALLALQGPAAATVLARHAP-AVAELTFMHCTR 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ C ++R+GYTGEDG EISVP + + LL++ +V+ GLGARDSL
Sbjct: 178 VELAGVECYVSRSGYTGEDGYEISVPADHAEALARLLLAEPEVQAIGLGARDSL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSG 69
PG R GG+PGA+++ I GV RKR G VP+R G E+ +A+ +G +TSG
Sbjct: 265 PGGER--AGGYPGAAVVARHIAEGVQRKRVGLLVKDKVPVREGAELVDADGHTIGKVTSG 322
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P+L +AMGY+ A++ +G L+ VR K V V+V K PFV YY
Sbjct: 323 GFGPTLGAPLAMGYVGSAHATLGTPLFAMVRGKPVAVEVAKTPFVPQRYY 372
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+R L+A+QGP ++T+L RH ++ L FM +AG+ C ++R+GYTGEDG EISV
Sbjct: 144 NDRALLALQGPAAATVLARHAP-AVAELTFMHCTRVELAGVECYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL++ +V+ GLGARDSL
Sbjct: 203 PADHAEALARLLLAEPEVQAIGLGARDSL 231
>gi|422920498|ref|ZP_16953812.1| glycine cleavage system T protein [Vibrio cholerae BJG-01]
gi|341650246|gb|EGS74124.1| glycine cleavage system T protein [Vibrio cholerae BJG-01]
Length = 376
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALSRKLTDFEEVEWIGLGARDSL 231
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHATLGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L E+V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALSRKLTDFEEVEWIGLGARDSL 231
>gi|402860103|ref|XP_003894475.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 2 [Papio
anubis]
Length = 347
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 120/185 (64%), Gaps = 10/185 (5%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKIFGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
A + D+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL
Sbjct: 90 AGCWEKDLALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQASVADDL 143
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
L FMTS + G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL
Sbjct: 144 KKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLATALLKNPEVKLAGLA 203
Query: 426 ARDSL 430
ARDSL
Sbjct: 204 ARDSL 208
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVSTNYYT 345
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQASVADDLKKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLATALLKNPEVKLAGLAARDSL 208
>gi|346975004|gb|EGY18456.1| aminomethyltransferase [Verticillium dahliae VdLs.17]
Length = 466
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 150/262 (57%), Gaps = 24/262 (9%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ + + +TPLYD H++HGGKMV F G MPVQY +S+ SH TR+ S+FDVSHM+Q
Sbjct: 56 AASAKQDKTPLYDFHVAHGGKMVLFGGHHMPVQYADLSLAQSHHFTRAHASLFDVSHMVQ 115
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSN 309
TG +LE + + V +++ G LS F GGI DD ++T+T E+ +VSN
Sbjct: 116 HRFTGPQAAAFLEKVTPSGVRDMEIGTSKLSTFLWPGTGGIVDDTMITRTEEEEFRVVSN 175
Query: 310 A-SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD----L 364
A +R KV L K G + + L GL+A+QGP S+ +LQ+ D +
Sbjct: 176 AGTREKVFEYLTEHTAALQKPEGGEFWWEVLQG--LGLVALQGPQSAEVLQKVIDPAEGV 233
Query: 365 DLSSLYFMTS-----RPCTIAG----IP--CTLTRAGYTGEDGVEISV--PGEQCTHIVE 411
DLS++YF + R +G +P ++R GYTGEDG E+S PG + T + E
Sbjct: 234 DLSAVYFGQTVWARLRAQNESGEWIVLPGKAMISRGGYTGEDGFEVSFESPGNEATRLAE 293
Query: 412 ALLSD---EDVKLAGLGARDSL 430
LLS E ++LAGLGARDSL
Sbjct: 294 TLLSTAGPETLRLAGLGARDSL 315
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 9 IFPGKRRRETGGFPGASIIQSQ--IKS----GVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I P +RRR GF GA I Q +KS GV R+R GF G P R G EIF ++
Sbjct: 342 IIPKERRRADAGFHGAEAIAPQLVVKSKGGQGVDRRRVGFVVAGAPAREGAEIFTKEGEK 401
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
VG +TSG PSP+L KNIAMGY+ K G EL V VR K+ + VTKMPFV + Y+ P
Sbjct: 402 VGVVTSGSPSPTLGKNIAMGYVRDGLHKAGTELDVVVRGKKRGLTVTKMPFVAAKYFKGP 461
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 20/106 (18%)
Query: 470 GLIAVQGPLSSTILQRHTD----LDLSSLYFMTS-----RPCTIAG----IP--CTLTRA 514
GL+A+QGP S+ +LQ+ D +DLS++YF + R +G +P ++R
Sbjct: 210 GLVALQGPQSAEVLQKVIDPAEGVDLSAVYFGQTVWARLRAQNESGEWIVLPGKAMISRG 269
Query: 515 GYTGEDGVEISV--PGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
GYTGEDG E+S PG + T + E LLS E ++LAGLGARDSL
Sbjct: 270 GYTGEDGFEVSFESPGNEATRLAETLLSTAGPETLRLAGLGARDSL 315
>gi|126135056|ref|XP_001384052.1| Aminomethyl transferase [Scheffersomyces stipitis CBS 6054]
gi|126091250|gb|ABN66023.1| Aminomethyl transferase [Scheffersomyces stipitis CBS 6054]
Length = 393
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 141/250 (56%), Gaps = 17/250 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+ S+ +TPL++ H+ GGKMVP+AGF MPV Y S SH RSKV +FDVSHMLQ
Sbjct: 11 STASSLLKTPLHEAHIELGGKMVPYAGFEMPVLYKDQSHIDSHNWVRSKVGLFDVSHMLQ 70
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+G + L+ I D+ +L +LS+ NE GG+ DD I+TK E+ ++V+NA
Sbjct: 71 HNFSGVDAKNLLQKITPIDLSQLPVNSSSLSVLLNENGGVIDDCIITKHGEEKYYMVTNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + + F + H F E L+A+QGP + ILQ+ T+ DLS +Y
Sbjct: 131 GCRAKDISFIKKEAENFSGV---THETF----EGTLLAIQGPKAVEILQKFTNEDLSKIY 183
Query: 371 FMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVP------GEQCTHIVEALLSD--EDVK 420
F ++ +A I T L R+GYTGEDG E+S+P +Q L+ + + VK
Sbjct: 184 FGQTKFVKLAPIDATVHLARSGYTGEDGFELSIPSLTAEESKQSLDFFYTLIREYPDVVK 243
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 244 PIGLAARDSL 253
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 13 KRRRETGGFPGASIIQSQI--KSGVSRKRTGFTSTGVPIRPGYEIFNAN-DQRVGAITSG 69
K RR+ GGF GAS I SQI K V+ +R G +S G R G +IF + +++G ITSG
Sbjct: 283 KTRRDQGGFNGASKILSQINDKKLVTARRIGVSSKGPSPRDGNKIFTEDGSEQIGYITSG 342
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L N+A YI+ +K+G ++ + +R K + V K+PFV SN+Y
Sbjct: 343 SPSPTLGGNVAQAYIDKK-AKIGSKIKIEIRGKLREGTVAKLPFVASNFY 391
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEIS 525
E L+A+QGP + ILQ+ T+ DLS +YF ++ +A I T L R+GYTGEDG E+S
Sbjct: 156 EGTLLAIQGPKAVEILQKFTNEDLSKIYFGQTKFVKLAPIDATVHLARSGYTGEDGFELS 215
Query: 526 VP------GEQCTHIVEALLSD--EDVKLAGLGARDSL 555
+P +Q L+ + + VK GL ARDSL
Sbjct: 216 IPSLTAEESKQSLDFFYTLIREYPDVVKPIGLAARDSL 253
>gi|289678190|ref|ZP_06499080.1| glycine cleavage system T protein, partial [Pseudomonas syringae
pv. syringae FF5]
Length = 226
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 132/227 (58%), Gaps = 9/227 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q +TG
Sbjct: 9 TPLHALHRELGAKMVPFAGYDMPVQYPA-GVMKEHLHTRALAGLFDVSHMGQIRLTGADA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ D+ +L G ++FT+E GGI DDL+V D L LV NA+ + D+
Sbjct: 68 AKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKDQDLA 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ K L ++ L EER L+A+QGP + T+L R +++ + FM T
Sbjct: 128 HLC------KHLAGHCKIEPLF-EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVT 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
+ G+ C ++R+GYTGEDG EISVP +Q + LL + +V GLG
Sbjct: 180 LLGVKCYVSRSGYTGEDGYEISVPAKQAEALARRLLEEPEVAPLGLG 226
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM T+ G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVAKMTFMQFASVTLLGVKCYVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLG 550
P +Q + LL + +V GLG
Sbjct: 203 PAKQAEALARRLLEEPEVAPLGLG 226
>gi|302413976|ref|XP_003004820.1| aminomethyltransferase [Verticillium albo-atrum VaMs.102]
gi|261355889|gb|EEY18317.1| aminomethyltransferase [Verticillium albo-atrum VaMs.102]
Length = 466
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 149/262 (56%), Gaps = 24/262 (9%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ + + +TPLYD H++HGGKMV F G MPVQY +S+ SH TR S+FDVSHM+Q
Sbjct: 56 AASAKQDKTPLYDFHVAHGGKMVLFGGHHMPVQYADLSLAQSHHFTREHASLFDVSHMVQ 115
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSN 309
TG +LE + + V +++ G LS F GGI DD ++T+T E+ +VSN
Sbjct: 116 HRFTGPQAAAFLEKVTPSGVRDMEIGTSKLSTFLWPGTGGIVDDTMITRTEEEEYRVVSN 175
Query: 310 A-SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD----L 364
A +R KV L K G + + L GL+A+QGP S+ +LQ+ D +
Sbjct: 176 AGTREKVFEYLTEHTAALQKPEGSEFWWEVLQG--LGLVALQGPQSAEVLQKVIDPAEGV 233
Query: 365 DLSSLYFMTS-----RPCTIAG----IP--CTLTRAGYTGEDGVEISV--PGEQCTHIVE 411
DLS++YF + R +G +P ++R GYTGEDG E+S PG + T + E
Sbjct: 234 DLSAVYFGQTVWARLRAQNESGEWIVLPGKAMISRGGYTGEDGFEVSFESPGNEATRLAE 293
Query: 412 ALLSD---EDVKLAGLGARDSL 430
LLS E ++LAGLGARDSL
Sbjct: 294 TLLSTAGPETLRLAGLGARDSL 315
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 9 IFPGKRRRETGGFPGASIIQSQ--IKS----GVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I P +RRR GF GA I Q +KS GV R+R GF G P R G EIF ++
Sbjct: 342 IIPKERRRADAGFHGAEAIAPQLVVKSKGGQGVDRRRVGFVVAGAPAREGAEIFTKEGEK 401
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
VG +TSG PSP+L KNIAMGY+ K G EL V VR K+ + VTKMPFV + Y+ P
Sbjct: 402 VGVVTSGSPSPTLGKNIAMGYVRDGLHKAGTELDVVVRGKKRGLTVTKMPFVVAKYFKGP 461
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 20/106 (18%)
Query: 470 GLIAVQGPLSSTILQRHTD----LDLSSLYFMTS-----RPCTIAG----IP--CTLTRA 514
GL+A+QGP S+ +LQ+ D +DLS++YF + R +G +P ++R
Sbjct: 210 GLVALQGPQSAEVLQKVIDPAEGVDLSAVYFGQTVWARLRAQNESGEWIVLPGKAMISRG 269
Query: 515 GYTGEDGVEISV--PGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
GYTGEDG E+S PG + T + E LLS E ++LAGLGARDSL
Sbjct: 270 GYTGEDGFEVSFESPGNEATRLAETLLSTAGPETLRLAGLGARDSL 315
>gi|152987967|ref|YP_001348169.1| glycine cleavage system protein T2 [Pseudomonas aeruginosa PA7]
gi|150963125|gb|ABR85150.1| glycine cleavage system T protein [Pseudomonas aeruginosa PA7]
Length = 373
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 137/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G KMVPFAG+ MPVQY A + HLHTR + +FDVSHM Q + G
Sbjct: 8 KTPLHALHLELGAKMVPFAGYDMPVQYPA-GVLKEHLHTREQAGLFDVSHMGQIRLAGAD 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFT+EQGGI DDL+V L D L LV NA+ + D+
Sbjct: 67 AALALESLVPVDILDLPVGQQRYALFTDEQGGILDDLMVA-NLGDCLLLVVNAACKHQDL 125
Query: 318 DLMVAAQDRFKSLGK-DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R G+ + F EER L+A+QGP + +L+R ++ + FM
Sbjct: 126 -----AHLRRHLEGRCSVEPLF---EERALLALQGPAAVRVLERLAP-QVAQMTFMQFAR 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP E + LL++ +V GLGARDSL
Sbjct: 177 VELLGQDCYVSRSGYTGEDGYEISVPAEHAEALARRLLAEPEVAPIGLGARDSL 230
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q GV+ KR GF G +P+R G EI +A+ + +G ++SG P+L
Sbjct: 269 AGGFPGAERIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDADGRVIGKVSSGGFGPTLN 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ A + +G E+ VR K V + V+KMPFV YY
Sbjct: 329 APLAMGYVPSALAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYY 371
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + +L+R ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 143 EERALLALQGPAAVRVLERLAP-QVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + LL++ +V GLGARDSL
Sbjct: 202 PAEHAEALARRLLAEPEVAPIGLGARDSL 230
>gi|224824001|ref|ZP_03697109.1| glycine cleavage system T protein [Pseudogulbenkiania ferrooxidans
2002]
gi|224603420|gb|EEG09595.1| glycine cleavage system T protein [Pseudogulbenkiania ferrooxidans
2002]
Length = 374
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 136/234 (58%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLY LH+ G KMVPFAG+ MPVQY + I H HTR+ +FDVSHM Q + G
Sbjct: 9 RTPLYALHVELGAKMVPFAGYEMPVQY-PLGILKEHQHTRAAAGLFDVSHMGQVKLIGAE 67
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ DV +L G +LFTN+ GGI DDL+V L++V NA+ +
Sbjct: 68 AAAALETLVPIDVIDLPVGLQRYALFTNDDGGILDDLMVANFGGGVLYVVVNAACK---- 123
Query: 318 DLMVAAQDRFKSLGKDIH-LQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
AQD K H + + +R L+A+QGP ++T+L RH ++ L FM
Sbjct: 124 -----AQDIAHLKSKIGHRCEVVELTDRALLALQGPAAATVLARHAP-AVAELTFMHCTR 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ C ++R+GYTGEDG EISVP + + LL++ +V+ GLGARDSL
Sbjct: 178 VELAGVECYVSRSGYTGEDGYEISVPADHAEALARLLLAEPEVQAIGLGARDSL 231
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSG 69
PG R GG+PGA+++ I GV RKR G VP+R G E+ +A+ +G +TSG
Sbjct: 265 PGGER--AGGYPGAAVVARHIAEGVQRKRVGLLVKDKVPVREGAELVDADGHTIGKVTSG 322
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P+L +AMGY+ A++ +G L+ VR K V V+V K PFV YY
Sbjct: 323 GFGPTLGAPLAMGYVASAHAALGTPLFAMVRGKPVAVEVAKTPFVPQRYY 372
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP ++T+L RH ++ L FM +AG+ C ++R+GYTGEDG EISVP
Sbjct: 145 DRALLALQGPAAATVLARHAP-AVAELTFMHCTRVELAGVECYVSRSGYTGEDGYEISVP 203
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL++ +V+ GLGARDSL
Sbjct: 204 ADHAEALARLLLAEPEVQAIGLGARDSL 231
>gi|357974321|ref|ZP_09138292.1| glycine cleavage system aminomethyltransferase T [Sphingomonas sp.
KC8]
Length = 373
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 138/234 (58%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q PL H + GG+MVPFAG+ MPVQ+ I A HL TRS S+FDVSHM Q +++G+
Sbjct: 11 QTLPLDAWHRARGGRMVPFAGYHMPVQF--EGIMAEHLWTRSSASLFDVSHMGQLLISGE 68
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+E LE++ D+ L G+ SL N+ GGI DDL+VT+T D L++V N + + D
Sbjct: 69 EVDEALEAVMPGDIAGLAEGRIRYSLLLNDSGGILDDLMVTRTKGD-LYVVVNGATKYDD 127
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + L + I L + +E+ LIA+QGP + L R + + L FMT+
Sbjct: 128 IAHL------HEHLPEHITLNHM--DEQALIALQGPKAVDALARLSP-GVEKLVFMTAGA 178
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EIS+P I L +VK AGLGARDSL
Sbjct: 179 FRLGGVSCWISRSGYTGEDGFEISLPASAADTIATLLCDQPEVKPAGLGARDSL 232
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPG+ I + G + KR G G P+R G + +A+ +G +TSG
Sbjct: 262 KRRREEGGFPGSDRIAIERAEGPATKRVGLIIEGRQPVREGGTVVDADGNDIGRVTSGGF 321
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SP+L+ IAM Y+ + + G + ++ R K KV MPFV NY
Sbjct: 322 SPTLQTPIAMAYVPVSLATPGTPVTLQQRGKLFPAKVAAMPFVPHNY 368
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 460 HLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGE 519
H+ +E+ LIA+QGP + L R + + L FMT+ + G+ C ++R+GYTGE
Sbjct: 138 HITLNHMDEQALIALQGPKAVDALARLSP-GVEKLVFMTAGAFRLGGVSCWISRSGYTGE 196
Query: 520 DGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
DG EIS+P I L +VK AGLGARDSL
Sbjct: 197 DGFEISLPASAADTIATLLCDQPEVKPAGLGARDSL 232
>gi|149236221|ref|XP_001523988.1| aminomethyltransferase, mitochondrial precursor [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452364|gb|EDK46620.1| aminomethyltransferase, mitochondrial precursor [Lodderomyces
elongisporus NRRL YB-4239]
Length = 397
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 139/247 (56%), Gaps = 25/247 (10%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLY H+ HGGKMV +AGF MPV Y S SH RS V +FDVSHMLQ ++G
Sbjct: 21 RTPLYQAHIDHGGKMVEYAGFEMPVLYKDQSHIESHKWVRSNVGLFDVSHMLQHNISGSE 80
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ +L+ + D+ L +LS+ N+ GG+ DD I+TK E++ ++V+NA R D+
Sbjct: 81 SKLFLQKVTPIDLDLLAINSSSLSVLLNKDGGVIDDCIITKHGENAYYMVTNAGCRAKDV 140
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAE----ERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D + K LQFL + E L+A+QGP + +LQ+ T+ DL +YF
Sbjct: 141 DFL-----------KKELLQFLDVKHNTFEGTLLAIQGPKAQDLLQKFTNEDLGKIYFGQ 189
Query: 374 SRPCTIAGIPCT--LTRAGYTGEDGVEISVPG------EQCTHIVEALLSD--EDVKLAG 423
++ ++ I T L R+GYTGEDG E+S+P ++ L+++ E VK G
Sbjct: 190 TKFLKLSPINATVHLARSGYTGEDGFELSIPSTSEVEQQEALSFFNTLIAEYPEIVKPIG 249
Query: 424 LGARDSL 430
L ARDSL
Sbjct: 250 LAARDSL 256
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)
Query: 13 KRRRETG--GFPGASIIQSQIK-SGVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGAITS 68
K RRE G F GA+ I SQIK +++R G TS G R G +IF + + VG +TS
Sbjct: 286 KTRRELGEQSFNGAAKILSQIKDKSTTKRRIGITSKGPSPRDGNKIFAEDGKTEVGYVTS 345
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G PSP+L NIA YI+ +K+G + V +R K D VTK+PFV+S +Y
Sbjct: 346 GSPSPTLGGNIAQAYIDKK-AKIGSNVKVDIRGKLRDAVVTKLPFVESKFY 395
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 14/109 (12%)
Query: 461 LQFLSPE----ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT--LTRA 514
LQFL + E L+A+QGP + +LQ+ T+ DL +YF ++ ++ I T L R+
Sbjct: 148 LQFLDVKHNTFEGTLLAIQGPKAQDLLQKFTNEDLGKIYFGQTKFLKLSPINATVHLARS 207
Query: 515 GYTGEDGVEISVPG------EQCTHIVEALLSD--EDVKLAGLGARDSL 555
GYTGEDG E+S+P ++ L+++ E VK GL ARDSL
Sbjct: 208 GYTGEDGFELSIPSTSEVEQQEALSFFNTLIAEYPEIVKPIGLAARDSL 256
>gi|116206962|ref|XP_001229290.1| hypothetical protein CHGG_02774 [Chaetomium globosum CBS 148.51]
gi|88183371|gb|EAQ90839.1| hypothetical protein CHGG_02774 [Chaetomium globosum CBS 148.51]
Length = 494
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 146/252 (57%), Gaps = 18/252 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPL+ LHL HG K+VPF GF MPVQY +S++ SHL TR+ S+FDVSHM+Q V +G
Sbjct: 84 QKTPLHALHLRHGAKLVPFGGFEMPVQYANLSVSESHLFTRAHASLFDVSHMVQRVFSGP 143
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNE--QGGIQDDLIVTKTL-EDSLFLVSNASRR 313
+L+ + A + L PG+ TL++ E GGI DDL+VT+ E ++V+NA+ R
Sbjct: 144 GAAAFLQRVTPAGIAALPPGRSTLAVLMKEDGSGGIVDDLMVTRLEGEGRFYVVTNAACR 203
Query: 314 KVDMDLMVAAQDRFKS--LGKDIHLQFLSAEERGLIAVQGPLSSTILQ----RHTDLDLS 367
+ D +++ +G+ + + GL+A+QGP + IL+ +L+L
Sbjct: 204 EKDDGYFGREVEKWNREVVGEGLGVVEERWSREGLVALQGPEAEGILKMVLAEGEELNLR 263
Query: 368 SLYFMTSRPCTI----AGIPCT--LTRAGYTGEDGVEISVPGEQCTHIVEALLSD---ED 418
L F S + G + ++R GYTGEDG EIS+ ++ + EALL E
Sbjct: 264 RLGFGQSAWAKLKMSGGGTSSSVLISRGGYTGEDGFEISILADETVGVTEALLEAGGPEK 323
Query: 419 VKLAGLGARDSL 430
V+LAGLGARDSL
Sbjct: 324 VQLAGLGARDSL 335
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 13 KRRRETGGFPGASIIQSQIKS------GVSRKRTGFTSTGVPIRPGYEIFNANDQ----- 61
+RR G+ GA +I Q ++ GV R+R G G P R G +I ++
Sbjct: 366 QRRGPDAGYYGAEVISEQFEAKGKGQPGVDRRRVGLIVEGAPAREGAKIVTRVEEGLQPV 425
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
VG +TSGCPSP+L KNIAM Y++ + KVG E+ V VR + V KMPFV + Y+
Sbjct: 426 EVGVVTSGCPSPTLGKNIAMAYVDTGFHKVGREVDVLVRGRPRKAVVAKMPFVATKYF-- 483
Query: 122 PKIRKVKKKGDEP 134
K +K+ +EP
Sbjct: 484 ----KGEKEKEEP 492
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 17/106 (16%)
Query: 467 EER----GLIAVQGPLSSTILQ----RHTDLDLSSLYFMTSRPCTI----AGIPCT--LT 512
EER GL+A+QGP + IL+ +L+L L F S + G + ++
Sbjct: 230 EERWSREGLVALQGPEAEGILKMVLAEGEELNLRRLGFGQSAWAKLKMSGGGTSSSVLIS 289
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
R GYTGEDG EIS+ ++ + EALL E V+LAGLGARDSL
Sbjct: 290 RGGYTGEDGFEISILADETVGVTEALLEAGGPEKVQLAGLGARDSL 335
>gi|372279491|ref|ZP_09515527.1| glycine cleavage system T protein, partial [Oceanicola sp. S124]
Length = 328
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 132/237 (55%), Gaps = 21/237 (8%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE 259
PL LH GGKMVPFAG+SMPVQY A + HLHTR+ +FDVSHM Q V+ G E
Sbjct: 13 PLAGLHAELGGKMVPFAGYSMPVQY-AAGVMKEHLHTRAAAGLFDVSHMGQVVLKGADPE 71
Query: 260 EW---LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
ES+ A V L G+ L TNE GGI DDL+ D LF+V NA+ + D
Sbjct: 72 TLALAFESLTPAAVLGLKEGRQRYGLLTNEAGGILDDLMFANR-GDHLFVVVNAACKGAD 130
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEE---RGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ M A +L + EE R L+A+QGP + L R +++ + FM
Sbjct: 131 IAHMRA------------NLPGIEVEEITDRCLLALQGPGAEAALARLAP-EVAEMRFMD 177
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+AG C ++R+GYTGEDG EISVP E + ALL+D+ V GLGARDSL
Sbjct: 178 VAYVTLAGAECWISRSGYTGEDGYEISVPDEAAEDLARALLADDAVLPIGLGARDSL 234
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + L R +++ + FM T+AG C ++R+GYTGEDG EISVP
Sbjct: 148 DRCLLALQGPGAEAALARLAP-EVAEMRFMDVAYVTLAGAECWISRSGYTGEDGYEISVP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E + ALL+D+ V GLGARDSL
Sbjct: 207 DEAAEDLARALLADDAVLPIGLGARDSL 234
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSP 73
GGFPGA I ++ G +R R G + G P+R G +A+ + VG ITSG P
Sbjct: 274 GGFPGAERILMELGEGPARVRVGLSPQGRAPMREGV-TLHAHGEEVGRITSGAFGP 328
>gi|209549483|ref|YP_002281400.1| glycine cleavage system aminomethyltransferase T [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209535239|gb|ACI55174.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 378
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 144/243 (59%), Gaps = 19/243 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A ++TPL+ LHL G +MVPFAG+ MPVQY A + H+HTR++ +FDVSHM Q +V
Sbjct: 5 AALKKTPLHALHLQLGARMVPFAGYDMPVQYPA-GVMKEHIHTRTEAGLFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ G I DDL+++ L+D LF+V
Sbjct: 64 KAKSGSYEDAALALESLVPVDILGLAEGRQRYGFFTDDSGCILDDLMISH-LDDHLFVVV 122
Query: 309 NASRRKVDM-DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLS 367
NAS ++ D+ L DR DI L R LIA+QGP + +L D++
Sbjct: 123 NASCKEADLAHLQTHIGDRC-----DITLL-----NRALIALQGPRAVEVLAELW-ADVA 171
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
++ FM R C + + C ++R+GY+GEDG EIS+P ++ + LL DV+ GLGAR
Sbjct: 172 AMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPADKAVDVTMRLLEHPDVQAIGLGAR 231
Query: 428 DSL 430
DSL
Sbjct: 232 DSL 234
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 148 NRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 207 ADKAVDVTMRLLEHPDVQAIGLGARDSL 234
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPG+ I S++++G +R+R G G P+R +++ + + +G +TSG PS
Sbjct: 273 AGGFPGSGRILSELENGAARRRVGLKPEGKAPVRGHAKLYADAEGKAEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G ++ VR K + + V+ +PFV Y
Sbjct: 333 VEGPVAMGYVPVSHAAAGTLVYAEVRGKYLPITVSALPFVTPTY 376
>gi|92117170|ref|YP_576899.1| glycine cleavage system aminomethyltransferase T [Nitrobacter
hamburgensis X14]
gi|91800064|gb|ABE62439.1| glycine cleavage system T protein [Nitrobacter hamburgensis X14]
Length = 387
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 143/243 (58%), Gaps = 20/243 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
QRTPL+ LHL+ GG++VPFAG MPVQY A + HLHTR+ +FDVSHM Q +
Sbjct: 12 QRTPLHALHLARGGRLVPFAGHDMPVQY-ASGVLKEHLHTRAGAGLFDVSHMGQIALRPK 70
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + L E + D+ + PG+ +LFTN GG+ DDL+V D LFLV N +
Sbjct: 71 SGKVGDAALALERLVPQDIVAVAPGRQRYALFTNAAGGLLDDLMVAN-FGDHLFLVVNGA 129
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D A R + L ++ L+ +R L+A+QGP ++++L + + ++ F
Sbjct: 130 CKAAD-----EAHLR-EHLSDVCTIEVLA--DRALVALQGPKAASVLAKACP-EAPAMRF 180
Query: 372 MTSRP--CTIAG--IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
M + P IAG I C ++R+GYTGEDG EIS+P Q +V LL D DV GLGAR
Sbjct: 181 MDAGPHQVRIAGGAIACFVSRSGYTGEDGFEISIPAAQAEALVSGLLDDPDVMPVGLGAR 240
Query: 428 DSL 430
DSL
Sbjct: 241 DSL 243
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPS 74
GGFPGA++I Q + G SR+R G G P+R G +F ++ +G +TSG PS
Sbjct: 282 AGGFPGANVILPQFEQGASRRRVGLRPEGRAPVREGAPLFADASSSDPIGTVTSGGFGPS 341
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L IAMGY+ P ++ +G ++ VR +R+ ++V++MPFV NY
Sbjct: 342 LNAPIAMGYLPPLHAAIGGTVFADVRGQRLPLRVSEMPFVPHNY 385
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP--CTIAG--IPCTLTRAGYTGEDGVE 523
+R L+A+QGP ++++L + + ++ FM + P IAG I C ++R+GYTGEDG E
Sbjct: 153 DRALVALQGPKAASVLAKACP-EAPAMRFMDAGPHQVRIAGGAIACFVSRSGYTGEDGFE 211
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
IS+P Q +V LL D DV GLGARDSL
Sbjct: 212 ISIPAAQAEALVSGLLDDPDVMPVGLGARDSL 243
>gi|229514758|ref|ZP_04404219.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae TMA 21]
gi|229348738|gb|EEO13696.1| aminomethyltransferase (glycine cleavage system T protein) [Vibrio
cholerae TMA 21]
Length = 376
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 138/232 (59%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+ G KMVPFAG+ MPVQY A+ + H+HTR +FDVSHM Q + G
Sbjct: 11 TPLHALHIEVGAKMVPFAGYDMPVQY-ALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK + FTN QGGI DDL+V + D LF+V NA+ + D+
Sbjct: 70 AAALEALVPVDIIDLPVGKQRYAFFTNAQGGIMDDLMVA-NMGDHLFVVVNAACKAQDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM +
Sbjct: 129 HLKA------HLPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G C ++R+GYTGEDG EISVP ++ + L ++V+ GLGARDSL
Sbjct: 180 IDGAECIVSRSGYTGEDGYEISVPADKAAALARKLTDFKEVEWIGLGARDSL 231
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 9 IFPGKRR---RETGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRV 63
I P +R+ RE GGFPGA II SQI++ VSRKR G T P+R G E+F+A ++
Sbjct: 259 IQPVRRKGGARE-GGFPGAEIILSQIETKQVSRKRVGLVGQTKAPVREGTELFDAQGNKI 317
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG P+ K ++M Y+ ++ +G E++ VR K + + V KMPFV YY
Sbjct: 318 GVVTSGTAGPTADKPVSMAYVSTEHATLGGEVFADVRGKMLPMTVEKMPFVPQRYY 373
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D+ ++ + E+R L+A+QGP ++ +L R ++ + FM + I G C ++R+
Sbjct: 134 LPADVEMEVI--EDRALLALQGPKAAQVLAR-LQPAVAKMLFMDVQLLEIDGAECIVSRS 190
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP ++ + L ++V+ GLGARDSL
Sbjct: 191 GYTGEDGYEISVPADKAAALARKLTDFKEVEWIGLGARDSL 231
>gi|402847815|ref|ZP_10896084.1| Aminomethyltransferase [Rhodovulum sp. PH10]
gi|402501865|gb|EJW13508.1| Aminomethyltransferase [Rhodovulum sp. PH10]
Length = 396
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 142/245 (57%), Gaps = 22/245 (8%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+ +RTPL+ LH+ G +MVPFAG+SMPVQY I A H HTR+K +FDVSHM Q +
Sbjct: 21 AGAKRTPLHALHVRLGARMVPFAGWSMPVQY-PQGILAEHRHTRAKAGLFDVSHMGQIAL 79
Query: 254 ---TGKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G E + LE++ AD+ L G+ L T GGI DDL+++ D L+LV
Sbjct: 80 WPRSGGVEEAAKALEALVPADLVGLAAGRQRYGLLTTPAGGILDDLMISNQ-GDHLYLVV 138
Query: 309 NASRRKVDM---DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD 365
NA+ + D+ D +A Q R + +R L+A+QGP ++ +L +
Sbjct: 139 NAACAEADLAHLDTHLAKQCRIEPR-----------PDRALLALQGPEAAAVLGALAP-E 186
Query: 366 LSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
++++ FM +R TIAGIP ++R+GYTGEDG EI++P E E LL + V GLG
Sbjct: 187 VAAMRFMDARAVTIAGIPSLVSRSGYTGEDGYEIALPAEAAESFAETLLKNPLVAPVGLG 246
Query: 426 ARDSL 430
ARDSL
Sbjct: 247 ARDSL 251
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP ++ +L +++++ FM +R TIAGIP ++R+GYTGEDG EI++P
Sbjct: 165 DRALLALQGPEAAAVLGALAP-EVAAMRFMDARAVTIAGIPSLVSRSGYTGEDGYEIALP 223
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E E LL + V GLGARDSL
Sbjct: 224 AEAAESFAETLLKNPLVAPVGLGARDSL 251
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAITSGCPSPS 74
GGFPGA I +Q+ G R R G G P+R G +F VG++TSG P+
Sbjct: 290 AGGFPGAETIFAQLAEGAPRVRVGLRPEGRAPVRGGAPLFRDETGGAPVGSVTSGGFGPT 349
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
++ +AMGY+ A + G L+ VR KR+ V V +PFV + P
Sbjct: 350 VEAPVAMGYVTTADAVPGTRLFAEVRGKRLPVAVATLPFVPPRFVRP 396
>gi|441503973|ref|ZP_20985970.1| Aminomethyltransferase [Photobacterium sp. AK15]
gi|441428146|gb|ELR65611.1| Aminomethyltransferase [Photobacterium sp. AK15]
Length = 352
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 135/219 (61%), Gaps = 11/219 (5%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPFAG+ MPVQY A+ + H+H R +FDVSHM Q + G+ + LE++ D+
Sbjct: 1 MVPFAGYDMPVQY-ALGVRKEHIHCREAAGLFDVSHMGQLRLHGESAAKALEALVPVDII 59
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG 331
+L GK + FTNEQGGI DDL+VT + LF+V NA+ ++ D+ + A L
Sbjct: 60 DLPAGKQRYAFFTNEQGGILDDLMVT-NFGEHLFVVVNAACKEQDIAHIKA------HLP 112
Query: 332 KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 391
+D+ L+ + E+R L+A+QGP ++ +L R + +S + FM + + G+ C ++R+GY
Sbjct: 113 QDVELELI--EDRALLALQGPKAAEVLAR-LNPAVSDMVFMDAGKYELLGVECFVSRSGY 169
Query: 392 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
TGEDG EISVP + + LL E+V+ GLGARDSL
Sbjct: 170 TGEDGYEISVPAGKADTLARELLGQEEVEWIGLGARDSL 208
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKS-GVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II QIK+ V+RKR G + P+R G ++F+A+D +G +TSG P+
Sbjct: 247 AGGFPGAEIILEQIKTKDVARKRVGLVGQSKAPVREGSKLFDADDNEIGVVTSGTFGPTK 306
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AM Y++ +++G E++ VR K++ + V KMPFV NYY
Sbjct: 307 GVPVAMAYVKTDLAQLGTEIFAEVRGKKLPMTVEKMPFVPQNYY 350
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L +D+ L+ + E+R L+A+QGP ++ +L R + +S + FM + + G+ C ++R+
Sbjct: 111 LPQDVELELI--EDRALLALQGPKAAEVLAR-LNPAVSDMVFMDAGKYELLGVECFVSRS 167
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EISVP + + LL E+V+ GLGARDSL
Sbjct: 168 GYTGEDGYEISVPAGKADTLARELLGQEEVEWIGLGARDSL 208
>gi|375106876|ref|ZP_09753137.1| glycine cleavage system T protein [Burkholderiales bacterium
JOSHI_001]
gi|374667607|gb|EHR72392.1| glycine cleavage system T protein [Burkholderiales bacterium
JOSHI_001]
Length = 373
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 140/232 (60%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL G KMVPFAG+SMPVQY I A H R ++FDVSHM Q + G
Sbjct: 8 TPLHALHLELGAKMVPFAGYSMPVQYPG-GIIAEHRQCREAAALFDVSHMGQIRLVGPAA 66
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ D+ +L GK +LFTN +GGI DDL+VT+ D LFLV NA+ + D+
Sbjct: 67 AAALETLVPMDIVDLAVGKQRYALFTNPEGGILDDLMVTRRPGD-LFLVVNAACKAADL- 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
Q +G + ++ +R L+A+QGP ++ L + + +SSL FMT + T
Sbjct: 125 -----QHLKGQIGN--RCEVINLPDRALLALQGPKAAEALAKLNPV-VSSLTFMTGQMVT 176
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C +TR+GYTGEDG EISVP ++ + ALL+ +V AGLGARD+L
Sbjct: 177 LHGAECFVTRSGYTGEDGFEISVPEDRAEALARALLALPEVGPAGLGARDTL 228
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNAND--QRVGAIT 67
PG R GG+PGA+II+ Q+ G KR G + VP+R G +F + + +G +T
Sbjct: 262 PGGAR--AGGYPGAAIIEQQLAEGPGVKRVGLLGAERVPVREGATVFASAEGGSPIGRVT 319
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SG +P + + IA+ + + +V ++W VR KRV ++V +PF Y+
Sbjct: 320 SGTLAPGVNQVIALATLAVNHGQVQQDVWAEVRGKRVAMRVVPLPFAPHRYH 371
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP ++ L + + +SSL FMT + T+ G C +TR+GYTGEDG EISVP
Sbjct: 142 DRALLALQGPKAAEALAKLNPV-VSSLTFMTGQMVTLHGAECFVTRSGYTGEDGFEISVP 200
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + ALL+ +V AGLGARD+L
Sbjct: 201 EDRAEALARALLALPEVGPAGLGARDTL 228
>gi|154282317|ref|XP_001541954.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410134|gb|EDN05522.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 491
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 150/258 (58%), Gaps = 25/258 (9%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+DLH++H +M PFAGFSMP+ Y +S T SH TR+K S+FDVSHM+Q ++G
Sbjct: 86 KKTQLHDLHIAHKARMSPFAGFSMPLVYSDLSHTESHNWTRNKASLFDVSHMVQHHISGP 145
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ L + + ++ L TLS F +E+ GGI DD ++T+ +S + V+NA RRK
Sbjct: 146 GALDLLLKVTPSSLNLLQINHSTLSCFLDEETGGIIDDTVITRLGPESFYFVTNAGRRKE 205
Query: 316 DMDLMVAAQDRFK-----SLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-------HTD 363
D+D + + FK S K I + + + L+A+QGPLS++ILQ T+
Sbjct: 206 DLDFLHKEIENFKWRHNSSAHKSI-ISWSVLDNHALVALQGPLSASILQSLITSDEAGTN 264
Query: 364 LDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVPG----EQCTHIVEA 412
DLS+L+F R + P L +R GYTGEDG EIS+P + + +
Sbjct: 265 SDLSTLHFCQCRFLHLNFPDGTHTPSHLLISRTGYTGEDGFEISIPTDIDPQLPMKVSQL 324
Query: 413 LLSDEDVKLAGLGARDSL 430
LLS+ V+LAGL ARDSL
Sbjct: 325 LLSNPSVRLAGLAARDSL 342
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAND--Q 61
GK RR+ + F GAS+I Q+ S ++ +R G TG P R I + D
Sbjct: 371 GKDRRDPSSSSSAFNGASVILPQLTSPTKTLTERRIGLIIETGPPARKDAPIIDMADGST 430
Query: 62 RVGAITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
++G +TSG PSP+L N+AMGY++ + K G E+ V VR K V PFV + +Y
Sbjct: 431 QIGTVTSGLPSPTLGGVNVAMGYVKQGFHKKGTEVGVLVRKKVHKATVVSTPFVPTKFY 489
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 18/107 (16%)
Query: 467 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--T 512
+ L+A+QGPLS++ILQ T+ DLS+L+F R + P L +
Sbjct: 236 DNHALVALQGPLSASILQSLITSDEAGTNSDLSTLHFCQCRFLHLNFPDGTHTPSHLLIS 295
Query: 513 RAGYTGEDGVEISVPG----EQCTHIVEALLSDEDVKLAGLGARDSL 555
R GYTGEDG EIS+P + + + LLS+ V+LAGL ARDSL
Sbjct: 296 RTGYTGEDGFEISIPTDIDPQLPMKVSQLLLSNPSVRLAGLAARDSL 342
>gi|410951177|ref|XP_003982275.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 2 [Felis
catus]
Length = 347
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 116/182 (63%), Gaps = 4/182 (2%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKILGCDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTSTSEGYLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A D+ LM +++G D+ L+ + + GL+A+QGP ++ +LQ DL L
Sbjct: 90 AGCWDKDLALMQGKVRELQNMGSDVSLEVV---DNGLLALQGPTAAQVLQAGVADDLRKL 146
Query: 370 YFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
FMTS + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARD
Sbjct: 147 PFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLENPEVKLAGLAARD 206
Query: 429 SL 430
SL
Sbjct: 207 SL 208
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 68/109 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 237 GKRRRTAMDFPGASVILPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTMIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPCLKKNVAMGYVPCEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYYT 345
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
+++G D+ L+ + + GL+A+QGP ++ +LQ DL L FMTS + G+ C
Sbjct: 107 LQNMGSDVSLEVV---DNGLLALQGPTAAQVLQAGVADDLRKLPFMTSAVMEVFGVSGCR 163
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 164 VTRCGYTGEDGVEISVPAAGAVHLATALLENPEVKLAGLAARDSL 208
>gi|418401378|ref|ZP_12974907.1| glycine cleavage system T protein [Sinorhizobium meliloti
CCNWSX0020]
gi|359504624|gb|EHK77157.1| glycine cleavage system T protein [Sinorhizobium meliloti
CCNWSX0020]
Length = 373
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 135/239 (56%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+ TPL+ LHLS G +MVPFAG+ MPVQY + HLHTR+ +FDVSHM Q VV
Sbjct: 2 KHTPLHALHLSLGARMVPFAGYDMPVQY-PEGVLKEHLHTRAAAGLFDVSHMGQIVVRPK 60
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + L E + ADV L G+ LFTN GGI DDL++ D LFLV NA+
Sbjct: 61 SGKIEDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNR-GDHLFLVVNAA 119
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + LG + L+ +R LIA+QGP + +L D+SS+ F
Sbjct: 120 CKDADLAHLK------DGLGSVCDVTMLT--DRALIALQGPRAGAVLCELW-ADVSSMRF 170
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + + C ++R+GYTGEDG EIS+P E + + LL DV GLGARDSL
Sbjct: 171 MDVAEADLHDVSCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARDSL 229
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA I +++ GVSR+R G G P+R +F + R G +TSG PS
Sbjct: 268 AGGFPGAGRILAELTDGVSRRRVGLRPEGRAPVRGNANLFADAEGRTAAGTVTSGGFGPS 327
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY++ +++VG L+ VR K + + VT +PF+K Y
Sbjct: 328 VDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPIAVTALPFIKQTY 371
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D+SS+ FM + + C ++R+GYTGEDG EIS+P
Sbjct: 143 DRALIALQGPRAGAVLCELW-ADVSSMRFMDVAEADLHDVSCIISRSGYTGEDGFEISIP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E + + LL DV GLGARDSL
Sbjct: 202 AEAAVDVTQRLLEHPDVLPIGLGARDSL 229
>gi|146329402|ref|YP_001210080.1| glycine cleavage system T protein [Dichelobacter nodosus VCS1703A]
gi|146232872|gb|ABQ13850.1| glycine cleavage system T protein [Dichelobacter nodosus VCS1703A]
Length = 365
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 134/236 (56%), Gaps = 13/236 (5%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A Q+T L + H + G KMV F G+ MPVQY I HL TRS S+FDVSHM Q ++
Sbjct: 2 ALQKTALTEWHRAKGAKMVEFTGYEMPVQYSE-GIIKEHLWTRSHASLFDVSHMGQILIR 60
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G E LE I D L GK +L N+QG I+DDL+VT+ +D +LV NASR++
Sbjct: 61 GADVAEKLERIMPMDFLSLPVGKQRYALLLNDQGTIEDDLMVTRRADD-FYLVVNASRKE 119
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
D ++ K+ G + ++R LIA+QGP S+ +L + + L FM +
Sbjct: 120 HDFAILQ------KTFGDAMQWW----QDRALIALQGPKSAAVLSV-LNPAVKDLKFMQA 168
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I C ++R+GYTGEDG EIS+P + + ALLSD V AGLGARDSL
Sbjct: 169 GMFKILEEDCWVSRSGYTGEDGFEISIPAKIAMALANALLSDSRVHPAGLGARDSL 224
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKK 77
GG+PGA II IK+GV+R+R GF+ G +P+R +IF+ ND+ VG ITSG + +L
Sbjct: 264 GGYPGAEIIAQHIKNGVARRRVGFSIEGKLPVRQHTKIFH-NDKEVGEITSGGFAATLDA 322
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY++ + G E VR+K + +++ +PFVK +Y
Sbjct: 323 PVAMGYVDSELATTGTEFVAMVRNKAIKMQIVDLPFVKKDY 363
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R LIA+QGP S+ +L + + L FM + I C ++R+GYTGEDG EIS+
Sbjct: 137 QDRALIALQGPKSAAVLSV-LNPAVKDLKFMQAGMFKILEEDCWVSRSGYTGEDGFEISI 195
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + ALLSD V AGLGARDSL
Sbjct: 196 PAKIAMALANALLSDSRVHPAGLGARDSL 224
>gi|398410580|ref|XP_003856638.1| hypothetical protein MYCGRDRAFT_84158 [Zymoseptoria tritici IPO323]
gi|339476523|gb|EGP91614.1| hypothetical protein MYCGRDRAFT_84158 [Zymoseptoria tritici IPO323]
Length = 390
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 142/244 (58%), Gaps = 19/244 (7%)
Query: 206 LSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESI 265
+ HG KMVPF G+SMPVQY +S+ SH TR K S+FDV HM+Q V G E +LESI
Sbjct: 1 MQHGAKMVPFGGYSMPVQYSDLSVGESHAWTREKASLFDVGHMVQYHVDGPGAEAFLESI 60
Query: 266 CVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKTLEDS---LFLVSNASRRKVDMDLMV 321
A + E+ PG+ +LS + Q GGI DD I+T+ E +LV+NA R D +
Sbjct: 61 TPAGLKEMKPGQSSLSTLLHPQTGGIVDDCIITRLEEGPKHLFYLVTNAGCRDKDYAFLS 120
Query: 322 AAQDRF-KSLGKDIHLQFLSAEER--GLIAVQGPLSSTILQRH----TDLDLSSLYFMTS 374
+A + + ++ +HL+ L +E + GL+A+QGPL++ ILQ ++ S YF
Sbjct: 121 SAIENWDNTVNPVVHLRNLQSEGQPYGLVALQGPLAAEILQSSLSSACKVEFSKWYFGNQ 180
Query: 375 RPCTIA-----GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGA 426
+ T++ +P +R GYTGEDG E+S+ Q + + LL + + ++ AGLGA
Sbjct: 181 KYITLSLPSGESLPIVASRGGYTGEDGFELSIHPSQTVEVTQHLLQTATPDKLRFAGLGA 240
Query: 427 RDSL 430
RDSL
Sbjct: 241 RDSL 244
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Query: 9 IFPGKRRR-ETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQ 61
I P RR E F GA I Q+ GVSR+R G G P R G EI +A+
Sbjct: 271 IIPKDRRSGERASFNGAETILPQLTPVSKGGKGVSRRRVGLVIEGAPAREGAEIVDADGN 330
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G ITSGCPSP+LKKNIAMGYI+ K G E+ V+VR K VTKMPFV S Y+
Sbjct: 331 VIGNITSGCPSPTLKKNIAMGYIKDGMHKSGTEVNVKVRGKPRKAVVTKMPFVPSKYH 388
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 14/111 (12%)
Query: 459 IHLQFLSPEER--GLIAVQGPLSSTILQRH----TDLDLSSLYFMTSRPCTIA-----GI 507
+HL+ L E + GL+A+QGPL++ ILQ ++ S YF + T++ +
Sbjct: 134 VHLRNLQSEGQPYGLVALQGPLAAEILQSSLSSACKVEFSKWYFGNQKYITLSLPSGESL 193
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
P +R GYTGEDG E+S+ Q + + LL + + ++ AGLGARDSL
Sbjct: 194 PIVASRGGYTGEDGFELSIHPSQTVEVTQHLLQTATPDKLRFAGLGARDSL 244
>gi|197104058|ref|YP_002129435.1| glycine cleavage system T protein [Phenylobacterium zucineum HLK1]
gi|196477478|gb|ACG77006.1| glycine cleavage system T protein [Phenylobacterium zucineum HLK1]
Length = 380
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 134/238 (56%), Gaps = 16/238 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL + H++ G KMVPFAG+SMPVQY A + HL R +FDVSHM Q +TG
Sbjct: 12 TPLTEAHVALGAKMVPFAGYSMPVQY-AEGVLKEHLWVREHAGLFDVSHMGQARLTGVSP 70
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTL------EDSLFLVSNASR 312
+E I D L PGK SL N +GGI DDL+ + + LFLV N +
Sbjct: 71 LSAIEEIVPGDFIGLKPGKQKYSLLLNRKGGIIDDLMAGRPTGPGGAPDPGLFLVVNGAC 130
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
++ D ++ L + ++ L E+R L+A+QGP ++ L+ H +++++ FM
Sbjct: 131 KENDFKVI------DDELAGQVDVERL--EDRALLALQGPKAAEALKVHAP-EVATMAFM 181
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
R G+ C ++R+GYTGEDG EISVP T + LL+DE VK GLGARDSL
Sbjct: 182 DIRRIEAFGVDCIVSRSGYTGEDGFEISVPAHAATFVWNTLLADERVKPIGLGARDSL 239
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP ++ L+ H +++++ FM R G+ C ++R+GYTGEDG EISV
Sbjct: 152 EDRALLALQGPKAAEALKVHAP-EVATMAFMDIRRIEAFGVDCIVSRSGYTGEDGFEISV 210
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P T + LL+DE VK GLGARDSL
Sbjct: 211 PAHAATFVWNTLLADERVKPIGLGARDSL 239
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSGCP 71
+ RRE FPGA+ I ++ G +R R G G P R G E+ + Q +G +TSG
Sbjct: 269 RNRREQRDFPGAARIVKELSEGPARVRVGLRVLEGAPAREGAEVADEAGQVIGVVTSGGF 328
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SP+L+ IA+ ++ P +S+ G +L V VR K +V K PFV Y
Sbjct: 329 SPTLRAGIALAFVPPLHSEAGTKLKVIVRGKPQACEVVKTPFVPHRY 375
>gi|298712644|emb|CBJ48669.1| Aminomethyltransferase [Ectocarpus siliculosus]
Length = 419
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 135/241 (56%), Gaps = 13/241 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQY----GAVSITASHLHTRSKVSVFDVSHMLQTV 252
++T + +H+ GKMVPFAG+ +PV Y G V H K SVFDVSHM Q
Sbjct: 41 EKTAYHQMHVDMKGKMVPFAGYELPVLYEGEGGGVMNETLHCRAPGKASVFDVSHMGQIR 100
Query: 253 VTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
TGK +++E V D+ L G+G L+L TN GGI DD +VT D +++V N +
Sbjct: 101 WTGKDAADFIERCVVGDIKGLKAGEGRLTLITNANGGIVDDTVVTNA-GDYIYMVVNGAC 159
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT--DLDLSSLY 370
+ DM FK D+H+ ++ ++ L+A+QG + LQ +D++ +
Sbjct: 160 KHGDMAHFKEQMADFKG---DVHMDYMETQQ--LLALQGKGAPAALQSLMPDGVDVTKML 214
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FMT T+AGI C +TR GYTGEDG E+SVP + + E+ L V++AGLGARD+
Sbjct: 215 FMTGVDTTVAGIEGCRVTRCGYTGEDGYEVSVPYDSAVALAESFLGISGVEVAGLGARDA 274
Query: 430 L 430
L
Sbjct: 275 L 275
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 11 PGKRRRETGGFPGASII---QSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGAI 66
P RRR GF GA + ++K SRKR G P R G EIF+A + ++G I
Sbjct: 306 PKGRRRLEQGFLGAEHFLTPEGKLKK-QSRKRVGIFGMRAPARDGTEIFDAEGKTKIGTI 364
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
TSG SP LKK +AMGY+E A++K G ++ +++R+K V VT MPF++++YY P
Sbjct: 365 TSGTFSPCLKKPVAMGYVETAHAKNGTDVMLKIRNKMVPTAVTAMPFLETSYYKP 419
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 434 ITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHT--DLDL 491
+ +N HG + ++ D+H+ ++ ++ L+A+QG + LQ +D+
Sbjct: 153 MVVNGACKHGDMAHFKEQMADFKGDVHMDYMETQQ--LLALQGKGAPAALQSLMPDGVDV 210
Query: 492 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 550
+ + FMT T+AGI C +TR GYTGEDG E+SVP + + E+ L V++AGLG
Sbjct: 211 TKMLFMTGVDTTVAGIEGCRVTRCGYTGEDGYEVSVPYDSAVALAESFLGISGVEVAGLG 270
Query: 551 ARDSL 555
ARD+L
Sbjct: 271 ARDAL 275
>gi|430003868|emb|CCF19659.1| glycine cleavage system T-protein (aminomethyltransferase)
[Rhizobium sp.]
Length = 385
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 137/239 (57%), Gaps = 17/239 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
++TPL+ LHLS G KMVPFAG+ MPVQY + + HLHTR+ +FDVSHM Q VV
Sbjct: 15 KQTPLHALHLSLGAKMVPFAGYDMPVQY-PLGVMKEHLHTRAAAGLFDVSHMGQVVVKAI 73
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + L E + D+ L PG+ FT + GGI DDL++ D LF+V NA+
Sbjct: 74 SGKLEDAALALERLVPVDILGLKPGRQRYGFFTGDNGGILDDLMIANR-ADHLFVVVNAA 132
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ M A G D+ L +R L+A+QGP + + S + F
Sbjct: 133 CKDQDVARMKA-----NMAGCDVTL----LGDRALLALQGPKAEEVFANLWP-GASEMKF 182
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M R +I G C ++R+GY+GEDG EISVP ++ + +ALL+ + + GLGARDSL
Sbjct: 183 MDVRDASILGADCIISRSGYSGEDGFEISVPADKAEELAKALLAHPECEPIGLGARDSL 241
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + + S + FM R +I G C ++R+GY+GEDG EISVP
Sbjct: 155 DRALLALQGPKAEEVFANLWP-GASEMKFMDVRDASILGADCIISRSGYSGEDGFEISVP 213
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + +ALL+ + + GLGARDSL
Sbjct: 214 ADKAEELAKALLAHPECEPIGLGARDSL 241
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR---VGAI 66
PG R GG+PGA+ + +G R+R G G P+R + + A D +G +
Sbjct: 275 PGGER--AGGYPGANRVAEDFATGPVRRRVGLKPEGKAPVR-AHAVLYAEDSPESPIGEV 331
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
TSG PS++ +AMGY+ + S+ G ++ VR K + + VT +PF+K Y
Sbjct: 332 TSGTFGPSVEGPVAMGYVPASLSEPGSRVFAEVRGKYLPLTVTALPFIKPTY 383
>gi|334316094|ref|YP_004548713.1| glycine cleavage system T protein [Sinorhizobium meliloti AK83]
gi|407720490|ref|YP_006840152.1| aminomethyltransferase, mitochondrial [Sinorhizobium meliloti Rm41]
gi|334095088|gb|AEG53099.1| glycine cleavage system T protein [Sinorhizobium meliloti AK83]
gi|407318722|emb|CCM67326.1| Aminomethyltransferase, mitochondrial [Sinorhizobium meliloti Rm41]
Length = 379
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 136/242 (56%), Gaps = 16/242 (6%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S + TPL+ LHLS G +MVPFAG+ MPVQY + HLHTR+ +FDVSHM Q VV
Sbjct: 5 STLKHTPLHALHLSLGARMVPFAGYDMPVQY-PEGVLKEHLHTRAAAGLFDVSHMGQIVV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+GK + L E + ADV L G+ LFTN GGI DDL++ D LFLV
Sbjct: 64 RPKSGKIEDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNR-GDHLFLVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D+ + LG + L+ +R LIA+QGP + +L D+SS
Sbjct: 123 NAACKDADLAHLK------DGLGSVCDVTMLT--DRALIALQGPRAGAVLCELW-ADVSS 173
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM + + C ++R+GYTGEDG EIS+P E + + LL DV GLGARD
Sbjct: 174 MRFMDVAEADLHDVSCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARD 233
Query: 429 SL 430
SL
Sbjct: 234 SL 235
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA I +++ GVSR+R G G P+R +F + R G +TSG PS
Sbjct: 274 AGGFPGAGRILAELTDGVSRRRVGLRPEGRAPVRGNANLFADAEGRTAAGTVTSGGFGPS 333
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY++ +++VG L+ VR K + + VT +PF+K Y
Sbjct: 334 VDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPIAVTALPFIKQTY 377
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D+SS+ FM + + C ++R+GYTGEDG EIS+P
Sbjct: 149 DRALIALQGPRAGAVLCELW-ADVSSMRFMDVAEADLHDVSCIISRSGYTGEDGFEISIP 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E + + LL DV GLGARDSL
Sbjct: 208 AEAAVDVTQRLLEHPDVLPIGLGARDSL 235
>gi|241204812|ref|YP_002975908.1| glycine cleavage system aminomethyltransferase T [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858702|gb|ACS56369.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 378
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 144/242 (59%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A +RTPL+ LHL G +MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V
Sbjct: 5 AALKRTPLHALHLQLGARMVPFAGYDMPVQYPA-GVMKEHLHTRAEAGLFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ G I DDL++ ++D LF+V
Sbjct: 64 KAKSGSYEDAALALESLVPVDILGLGEGRQRYGFFTDDTGCILDDLMIAH-VDDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ ++ D VA S DI + +R LIA+QGP + +L D+++
Sbjct: 123 NAACKEAD----VAHLQAHISDQCDI-----TVLDRALIALQGPRAVAVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+P ++ + + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPSDKAVDVTKRLLEHPDVQAIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 148 DRALIALQGPRAVAVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + + LL DV+ GLGARDSL
Sbjct: 207 SDKAVDVTKRLLEHPDVQAIGLGARDSL 234
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPS 74
GGFPG+ I S++++G +R+R G G P+R +++ + ++ G +TSG PS
Sbjct: 273 AGGFPGSGRILSELENGAARRRVGLKPEGKAPVRGHAKLYTDAEGKIEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY++ +++ G ++ VR K + V+ +PFV Y
Sbjct: 333 VEGPVAMGYVQLSHAAAGTLVYAEVRGKYLPTTVSALPFVTPTY 376
>gi|403291249|ref|XP_003936711.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 3 [Saimiri
boliviensis boliviensis]
Length = 347
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 119/185 (64%), Gaps = 10/185 (5%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKICGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
A + D+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL
Sbjct: 90 AGCWEKDLALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDL 143
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
L FMTS + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL
Sbjct: 144 RKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLENPEVKLAGLA 203
Query: 426 ARDSL 430
ARDSL
Sbjct: 204 ARDSL 208
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTMIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPSLKKNVAMGYVPFEYSRPGTKLMVEVRRKQQMAVVSKMPFVPTNYYT 345
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLENPEVKLAGLAARDSL 208
>gi|400601387|gb|EJP69030.1| glycine cleavage system T protein [Beauveria bassiana ARSEF 2860]
Length = 437
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 29/265 (10%)
Query: 190 GSSPSAE---QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
GSS +A ++TPLYD H++HGGKMVPFAG+ MPVQYG +S+ SH TR+ S+FDVS
Sbjct: 32 GSSSAAGGELKKTPLYDFHVAHGGKMVPFAGYHMPVQYGGLSLADSHHFTRNHASIFDVS 91
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTL-SLFTNEQGGIQDDLIVTKTLEDSLF 305
HM+Q + G +LE + + + L +L GGI DD ++T+ ED +
Sbjct: 92 HMVQHIFKGPRAAAFLERVTPSAWATQGAMQSKLTTLLWPGTGGIVDDTVITRLGEDEYY 151
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----R 360
+V+N + + D + ++ + G + ++ ++ GL A+QGP ++ ILQ +
Sbjct: 152 VVTNGACLEKDTKYI---DEQLGAFGAGV--EWTRLDKSGLFALQGPQAAEILQQVLDRK 206
Query: 361 HTDLDLSSLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPGEQ------CTH 408
+ D+DL+ LYF + + P ++R GYTGEDG EIS G++ T
Sbjct: 207 YADIDLTQLYFGNAVWAQLKLADGSVTHPVLISRGGYTGEDGFEISFNGQRYPAFDTTTP 266
Query: 409 IVEALLSD---EDVKLAGLGARDSL 430
VEALL+ E +++AGLGARDSL
Sbjct: 267 AVEALLAAAGPERLQMAGLGARDSL 291
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I P +RR GF GA +I Q+ +GV ++R G G P R G I + +
Sbjct: 318 IIPKERRTTDAGFHGAEVIVPQMTPRSKGGAGVQKRRVGLVVEGAPAREGATI-EQDGES 376
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G ITSG PSP+L KNIAMGY+ K G E+ V VR ++ +TKMPF+ + Y+
Sbjct: 377 IGTITSGVPSPTLGKNIAMGYVRDGLHKAGTEVDVVVRGRKRKGVITKMPFIPTRYW 433
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 22/130 (16%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSR 500
K +++ + G + L ++ GL A+QGP ++ ILQ ++ D+DL+ LYF +
Sbjct: 164 KYIDEQLGAFGAGVEWTRL--DKSGLFALQGPQAAEILQQVLDRKYADIDLTQLYFGNAV 221
Query: 501 PCTI------AGIPCTLTRAGYTGEDGVEISVPGEQ------CTHIVEALLSD---EDVK 545
+ P ++R GYTGEDG EIS G++ T VEALL+ E ++
Sbjct: 222 WAQLKLADGSVTHPVLISRGGYTGEDGFEISFNGQRYPAFDTTTPAVEALLAAAGPERLQ 281
Query: 546 LAGLGARDSL 555
+AGLGARDSL
Sbjct: 282 MAGLGARDSL 291
>gi|15965302|ref|NP_385655.1| glycine cleavage system aminomethyltransferase T [Sinorhizobium
meliloti 1021]
gi|384536456|ref|YP_005720541.1| glycine cleavage system aminomethyltransferase T [Sinorhizobium
meliloti SM11]
gi|433613321|ref|YP_007190119.1| glycine cleavage system T protein [Sinorhizobium meliloti GR4]
gi|15074482|emb|CAC46128.1| Probable aminomethyltransferase (glycine cleavage system T protein)
[Sinorhizobium meliloti 1021]
gi|336033348|gb|AEH79280.1| glycine cleavage system aminomethyltransferase T [Sinorhizobium
meliloti SM11]
gi|429551511|gb|AGA06520.1| glycine cleavage system T protein [Sinorhizobium meliloti GR4]
Length = 379
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 136/242 (56%), Gaps = 16/242 (6%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S + TPL+ LHLS G +MVPFAG+ MPVQY + HLHTR+ +FDVSHM Q VV
Sbjct: 5 STLKHTPLHALHLSLGARMVPFAGYDMPVQY-PEGVLKEHLHTRAAAGLFDVSHMGQIVV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+GK + L E + ADV L G+ LFTN GGI DDL++ D LFLV
Sbjct: 64 RPKSGKIEDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNR-GDHLFLVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D+ + LG + L+ +R LIA+QGP + +L D+SS
Sbjct: 123 NAACKDADLAHLK------DGLGSVCDVTMLT--DRALIALQGPRAGAVLCELW-ADVSS 173
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM + + C ++R+GYTGEDG EIS+P E + + LL DV GLGARD
Sbjct: 174 MRFMDVTEADLHDVSCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARD 233
Query: 429 SL 430
SL
Sbjct: 234 SL 235
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA I +++ GVSR+R G G P+R +F + R G +TSG PS
Sbjct: 274 AGGFPGAGRILAELTDGVSRRRVGLRPEGRAPVRGNANLFADEEGRTAAGTVTSGGFGPS 333
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY++ +++VG L+ VR K + + VT +PF+K Y
Sbjct: 334 VDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPIAVTALPFIKQTY 377
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D+SS+ FM + + C ++R+GYTGEDG EIS+P
Sbjct: 149 DRALIALQGPRAGAVLCELW-ADVSSMRFMDVTEADLHDVSCIISRSGYTGEDGFEISIP 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E + + LL DV GLGARDSL
Sbjct: 208 AEAAVDVTQRLLEHPDVLPIGLGARDSL 235
>gi|353240339|emb|CCA72213.1| probable GCV1-glycine decarboxylase, subunit T, mitochondrial
[Piriformospora indica DSM 11827]
Length = 423
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 130/241 (53%), Gaps = 10/241 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LY+ H+ +G KMVPFAG+ MP+ Y V SH H RS V +FDV HM+Q G
Sbjct: 37 RRTGLYNFHVENGAKMVPFAGYEMPLTYSGVGQVDSHKHVRSSVGLFDVGHMVQHYFRGA 96
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE + +D++ L TLS+ GGI DD +VTK D ++V+NA RR+ D
Sbjct: 97 GATRFLEWLTPSDLNSLPNHSSTLSVLLLPSGGILDDTVVTKHTPDLYYVVTNAGRREED 156
Query: 317 MDLMVAAQDRF-KSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD------LDLSSL 369
+ + + + G + Q L E+ GL+A+QGP S+ LQ D DL L
Sbjct: 157 LTWFASKLKEWNEKHGDKVEHQIL--EDWGLVALQGPKSADYLQGFVDTYDGKQYDLKQL 214
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
F S +I G+ + R GYTGEDG EIS+P + L V+LAGL ARDS
Sbjct: 215 TFGKSAWLSIGGVKVHVARGGYTGEDGFEISLPPSETVAWTRKLYKFP-VQLAGLAARDS 273
Query: 430 L 430
L
Sbjct: 274 L 274
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 12 GKRRRETG----GFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAI 66
GK RR G F GA + SQI+ GVSRKR GF G P R +F ++ +++G +
Sbjct: 303 GKNRRTPGDDKASFIGADAVISQIEKGVSRKRVGFLVEGPPAREHAPLFAPSSSEQIGEV 362
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
TSG PSPS KNIAMGYI YSK E+ V VR KR KVTKMPFV +NY+
Sbjct: 363 TSGIPSPSTGKNIAMGYIATKYSKRDTEVEVEVRGKRRKAKVTKMPFVPTNYW 415
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD------LDLSSLYFMT 498
LK N++ G + Q L E+ GL+A+QGP S+ LQ D DL L F
Sbjct: 164 LKEWNEKH---GDKVEHQIL--EDWGLVALQGPKSADYLQGFVDTYDGKQYDLKQLTFGK 218
Query: 499 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S +I G+ + R GYTGEDG EIS+P + L V+LAGL ARDSL
Sbjct: 219 SAWLSIGGVKVHVARGGYTGEDGFEISLPPSETVAWTRKLYKFP-VQLAGLAARDSL 274
>gi|384529262|ref|YP_005713350.1| glycine cleavage system T protein [Sinorhizobium meliloti BL225C]
gi|333811438|gb|AEG04107.1| glycine cleavage system T protein [Sinorhizobium meliloti BL225C]
Length = 379
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 135/239 (56%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+ TPL+ LHLS G +MVPFAG+ MPVQY + HLHTR+ +FDVSHM Q VV
Sbjct: 8 KHTPLHALHLSLGARMVPFAGYDMPVQY-PEGVLKEHLHTRAAAGLFDVSHMGQIVVRPK 66
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + L E + ADV L G+ LFTN GGI DDL++ D LFLV NA+
Sbjct: 67 SGKIEDAALALEKLVPADVLGLAEGRQRYGLFTNAAGGILDDLMIVNR-GDHLFLVVNAA 125
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + LG + L+ +R LIA+QGP + +L D+SS+ F
Sbjct: 126 CKDADLAHLK------DGLGSVCDVTMLT--DRALIALQGPRAGAVLCELW-ADVSSMRF 176
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + + C ++R+GYTGEDG EIS+P E + + LL DV GLGARDSL
Sbjct: 177 MDVTEADLHDVSCIISRSGYTGEDGFEISIPAEAAVDVTQRLLEHPDVLPIGLGARDSL 235
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA+ I +++ GVSR+R G G P+R +F + R G +TSG PS
Sbjct: 274 AGGFPGAARILAELTDGVSRRRVGLRPEGRAPVRGNANLFADEEGRTAAGTVTSGGFGPS 333
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY++ +++VG L+ VR K + + VT +PF+K Y
Sbjct: 334 VDGPVAMGYVDAEHAEVGTRLFAEVRGKYLPIAVTALPFIKQTY 377
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D+SS+ FM + + C ++R+GYTGEDG EIS+P
Sbjct: 149 DRALIALQGPRAGAVLCELW-ADVSSMRFMDVTEADLHDVSCIISRSGYTGEDGFEISIP 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E + + LL DV GLGARDSL
Sbjct: 208 AEAAVDVTQRLLEHPDVLPIGLGARDSL 235
>gi|156053183|ref|XP_001592518.1| hypothetical protein SS1G_06759 [Sclerotinia sclerotiorum 1980]
gi|154704537|gb|EDO04276.1| hypothetical protein SS1G_06759 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 475
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 143/250 (57%), Gaps = 18/250 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYDLH+++GGKMV F GF MPVQY +S++ASH TR S+FDVSHM+Q G
Sbjct: 77 RKTPLYDLHVANGGKMVSFGGFHMPVQYSGLSVSASHHFTREHASLFDVSHMVQHRFEGP 136
Query: 257 HREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+L+ I A + L +G LS L GGI DD I+T+ + ++V+NA R+
Sbjct: 137 GATAFLQRITPASIANLALHQGGLSCLLHPGTGGIVDDTIITRLGPELFYVVTNAGCREK 196
Query: 316 DMDLMVAAQDRF-KSLGKDIHLQFLSAEERGLIAVQGPLSSTIL-----QRHTDLDLSSL 369
D+ + + F K G+ + + L GL+A+QGP S IL ++ + DL
Sbjct: 197 DLKYLGEELEAFAKEGGEKVGWEVLDG--WGLVALQGPESEGILKEVLVEKSGEGDLKDF 254
Query: 370 YFMTSRPCTIAGIPCTL------TRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVK 420
F SR I + T+ +R GYTGEDG EIS+P + + E+LL +E ++
Sbjct: 255 LFGQSRFMKIRLVDGTISGNLLVSRGGYTGEDGFEISIPESETVKVTESLLKSAGEEKLQ 314
Query: 421 LAGLGARDSL 430
LAGLGARDSL
Sbjct: 315 LAGLGARDSL 324
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 6/114 (5%)
Query: 12 GKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGA 65
GK RR GGF GA +I Q+ SGV R+R G G P R G +I N +++G
Sbjct: 353 GKERRTEGGFHGAKVILKQLTPKSKGGSGVERRRIGLIVEGAPAREGADIVNDKGEKIGN 412
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
ITSGCPSP+L KN+AMGYI+ + K G ++ V VR K KVTKMPFV S Y+
Sbjct: 413 ITSGCPSPTLGKNVAMGYIKDGFHKAGTDVGVVVRGKERKAKVTKMPFVPSKYW 466
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 14/100 (14%)
Query: 470 GLIAVQGPLSSTIL-----QRHTDLDLSSLYFMTSRPCTIAGIPCTLT------RAGYTG 518
GL+A+QGP S IL ++ + DL F SR I + T++ R GYTG
Sbjct: 225 GLVALQGPESEGILKEVLVEKSGEGDLKDFLFGQSRFMKIRLVDGTISGNLLVSRGGYTG 284
Query: 519 EDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
EDG EIS+P + + E+LL +E ++LAGLGARDSL
Sbjct: 285 EDGFEISIPESETVKVTESLLKSAGEEKLQLAGLGARDSL 324
>gi|418296249|ref|ZP_12908093.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539681|gb|EHH08919.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
tumefaciens CCNWGS0286]
Length = 379
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 143/274 (52%), Gaps = 25/274 (9%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHLS G +MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q ++ K
Sbjct: 10 TPLHSLHLSLGARMVPFAGYDMPVQYPA-GVLKEHLQTRTSAGLFDVSHMGQVILKAKSG 68
Query: 259 EEW-----LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
LE + D+ L G+ FT+E G I DDL++T D LF+V NAS +
Sbjct: 69 NNADAALALEKLVPVDILGLKEGRQRYGFFTDENGCILDDLMITNR-GDHLFVVVNASCK 127
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ M A L D + L ++R LIA+QGP + +L +S + FM
Sbjct: 128 HADVAHMKA------HLSGDCEITLL--DDRALIALQGPRAEAVLAELW-AGVSEMKFMD 178
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL--- 430
+ +PC ++R+GY+GEDG EISVP E+ I +ALL D + GLGARDSL
Sbjct: 179 VLEIPLHDVPCIVSRSGYSGEDGFEISVPAEKAEEIAKALLEHPDCEPIGLGARDSLRLE 238
Query: 431 ------SGDITLNTPVPHGSLKLSNDRFKSLGKD 458
DI T SL+ + + + G D
Sbjct: 239 AGLCLYGNDIDTTTSPIEASLEWAIQKARRTGGD 272
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSL 75
GGFPGA I ++K G SR+R G G P+R ++F + + +G +TSG PS+
Sbjct: 275 GGFPGAERILGELKDGTSRRRVGLKPEGKAPVRGHSKLFADAEGKTEIGEVTSGGFGPSV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ AY+ G ++ VR K + V V +PF+K Y
Sbjct: 335 EGPVAMGYVPTAYTAPGTAIFAEVRGKYLPVTVAALPFIKPTY 377
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L D + L ++R LIA+QGP + +L +S + FM + +PC ++R+
Sbjct: 138 LSGDCEITLL--DDRALIALQGPRAEAVLAELW-AGVSEMKFMDVLEIPLHDVPCIVSRS 194
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GY+GEDG EISVP E+ I +ALL D + GLGARDSL
Sbjct: 195 GYSGEDGFEISVPAEKAEEIAKALLEHPDCEPIGLGARDSL 235
>gi|358395935|gb|EHK45322.1| hypothetical protein TRIATDRAFT_299992 [Trichoderma atroviride IMI
206040]
Length = 433
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 166/315 (52%), Gaps = 37/315 (11%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S SS ++TPLYD H+++G KMVPFAG+SMPVQY ++S+ SH TR+ S+FDVSH
Sbjct: 33 SNASSGEELKKTPLYDFHVANGAKMVPFAGYSMPVQYSSLSLADSHHFTRNHASIFDVSH 92
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFL 306
M+Q + G +LE + + + P G L+ F GGI DD IVT+ ED ++
Sbjct: 93 MVQHIFKGPDAVAFLEKVTPSAWGNVAPMSGKLTTFLWPGTGGIVDDTIVTRIGEDEFYV 152
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDL 364
V+N + + D + +F ++Q+ + GLIA+QGP ++ IL TD+
Sbjct: 153 VTNGACLEKDTKYIDEQLGKFGG-----NVQWTRLDGSGLIALQGPQAAEILSEVLATDV 207
Query: 365 DLSSLYFMTSRPCTIAGI------PCTLTRAGYTGEDGVEISVPG------EQCTHIVEA 412
+L YF + + P ++R GYTGEDG EIS G E VE+
Sbjct: 208 NLKEFYFGNTVKAELKLADGSKTHPVLISRGGYTGEDGFEISFNGKLYPALESTVKAVES 267
Query: 413 LLSD---EDVKLAGLGARDSLSGDITL----------NTPVPHG-SLKLSNDRFKS---L 455
L+ E +++AGLGARDSL + + TPV G S +S +R K+
Sbjct: 268 LMKTGGPERLQMAGLGARDSLRLEAGMCLYGHDLDDTTTPVEAGLSWIISPERRKAGGFH 327
Query: 456 GKDIHLQFLSPEERG 470
G ++ L L+P+ +G
Sbjct: 328 GAEVILPQLTPKSKG 342
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 14 RRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAIT 67
RR+ GGF GA +I Q+ SGV+R+R GF G P R G EI + + +G IT
Sbjct: 319 ERRKAGGFHGAEVILPQLTPKSKGGSGVNRRRVGFVVQGAPAREGAEI-QKDGETIGTIT 377
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
SG PSP+L KNIAMGYI+ K G E+ + VR ++ VTKMPF + Y+ P
Sbjct: 378 SGVPSPTLGKNIAMGYIKDGQHKSGTEVDIVVRGRKRAGVVTKMPFTPAKYWKAP 432
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 17/113 (15%)
Query: 460 HLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTIAGI------PCTL 511
++Q+ + GLIA+QGP ++ IL TD++L YF + + P +
Sbjct: 176 NVQWTRLDGSGLIALQGPQAAEILSEVLATDVNLKEFYFGNTVKAELKLADGSKTHPVLI 235
Query: 512 TRAGYTGEDGVEISVPG------EQCTHIVEALLSD---EDVKLAGLGARDSL 555
+R GYTGEDG EIS G E VE+L+ E +++AGLGARDSL
Sbjct: 236 SRGGYTGEDGFEISFNGKLYPALESTVKAVESLMKTGGPERLQMAGLGARDSL 288
>gi|50555027|ref|XP_504922.1| YALI0F02849p [Yarrowia lipolytica]
gi|49650792|emb|CAG77727.1| YALI0F02849p [Yarrowia lipolytica CLIB122]
Length = 406
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 130/235 (55%), Gaps = 7/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ LH + V +AGF+MPV Y + SH R K +FDVSHMLQ +G
Sbjct: 38 KKTPLFPLHEKLDAQFVDYAGFAMPVLYKGTTHIQSHNWVREKAGLFDVSHMLQHRFSGP 97
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+LE I AD+ L P TLS+ +GGI DDLI++K E+ ++V+NA R D
Sbjct: 98 AATEFLEKITPADLQALQPFTSTLSVLLTPEGGIVDDLIISKHGENDFYVVTNAGCRDKD 157
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + F K +H GLIA+QGP ++ LQ+ T+ DLS + F S
Sbjct: 158 LAFLAKESEPFGD--KLVHDTIGG----GLIALQGPEAAAALQKFTNYDLSQIKFGQSAW 211
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCT-HIVEALLSDEDVKLAGLGARDSL 430
G + R GYTGEDG E+S+P + + EALL +++V GL ARDSL
Sbjct: 212 VDFGGNKYHVARGGYTGEDGFEVSIPDDAASVAFAEALLENDNVIAVGLAARDSL 266
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 12 GKRRR--ETGGFPGASIIQSQIKS-GVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITS 68
GK RR + GF G+ I +QIK ++ R G + G R G I N ++VG +TS
Sbjct: 295 GKARRSGDRTGFNGSDKILAQIKDKSATKARVGLFNDGPAPREGVAILNEAGEKVGVVTS 354
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
GC SPSL KNI MGY+ ++K G +L + +R+K+ +V KMPFV Y+
Sbjct: 355 GCKSPSLNKNIGMGYVNKPFNKSGTKLTLDIRNKKRPAEVVKMPFVPHKYF 405
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 470 GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGE 529
GLIA+QGP ++ LQ+ T+ DLS + F S G + R GYTGEDG E+S+P +
Sbjct: 180 GLIALQGPEAAAALQKFTNYDLSQIKFGQSAWVDFGGNKYHVARGGYTGEDGFEVSIPDD 239
Query: 530 QCT-HIVEALLSDEDVKLAGLGARDSL 555
+ EALL +++V GL ARDSL
Sbjct: 240 AASVAFAEALLENDNVIAVGLAARDSL 266
>gi|424881741|ref|ZP_18305373.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392518104|gb|EIW42836.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 378
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 144/242 (59%), Gaps = 17/242 (7%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A RTPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V
Sbjct: 5 AALNRTPLHALHLSLGARMVPFAGYDMPVQYPA-GVMKEHLHTRAEAGLFDVSHMGQVIV 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+G + + L ES+ D+ L G+ FT++ G I DDL++ +++ LF+V
Sbjct: 64 KAKSGSYEDAALALESLVPVDILGLGEGRQRYGFFTDDTGCILDDLMIAH-VDNHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ ++ D+ + A + + L +R LIA+QGP + +L D+++
Sbjct: 123 NAACKEADIAHLQA------HISDQCDITVL---DRALIALQGPRAVAVLAELW-ADVAA 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EIS+P ++ + + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPSDKAEDVTKRLLEHPDVQAIGLGARD 232
Query: 429 SL 430
SL
Sbjct: 233 SL 234
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 148 DRALIALQGPRAVAVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + + LL DV+ GLGARDSL
Sbjct: 207 SDKAEDVTKRLLEHPDVQAIGLGARDSL 234
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPS 74
GGFPG+ I S++++G +R+R G G P+R +++ + +V G +TSG PS
Sbjct: 273 AGGFPGSGRILSELENGAARRRVGLKPEGKAPVRGHAKLYADAEGKVEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G ++ VR K + + V+ +PFV Y
Sbjct: 333 VEGPVAMGYVPLSHAAAGTLVYAEVRGKYLPITVSALPFVTPTY 376
>gi|342879600|gb|EGU80845.1| hypothetical protein FOXB_08712 [Fusarium oxysporum Fo5176]
Length = 439
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 143/252 (56%), Gaps = 23/252 (9%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H+++GGK+VPFAG+S+PVQY +S+ SH TR S+FDVSHM+Q + GK
Sbjct: 46 KKTPLYDFHVANGGKLVPFAGYSLPVQYSNLSLAQSHHFTREHASLFDVSHMVQHIFKGK 105
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+LE + +D + L+ F GGI DD +VT+ ED+ ++V+N +
Sbjct: 106 DAAAFLEKLTPSDWTNQGVMQSKLTTFLWPGTGGIVDDSVVTRLGEDTYYVVTNGACLDK 165
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMT 373
D + + G D+ Q+ + GL+A+QGP S+ IL +D+DLS LYF
Sbjct: 166 DTKYL---DEELGKFGGDV--QWSRLDNSGLVALQGPQSAEILSEVLASDVDLSKLYFGN 220
Query: 374 SRPCTIAGI------PCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLSD---ED 418
+ + P ++R GYTGEDG EIS G E T ++ALLS E
Sbjct: 221 AVWAELKLADGSKTHPVLISRGGYTGEDGFEISFNGKEYPAFETTTPAIQALLSKAGPER 280
Query: 419 VKLAGLGARDSL 430
++LAGLGARDSL
Sbjct: 281 LQLAGLGARDSL 292
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 15 RRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITS 68
RRE GGF GA I Q+ SGV+R+R G G P R G EI + + +++G ITS
Sbjct: 324 RREAGGFHGAETIIPQLTPKSKGGSGVTRRRVGLFVDGAPAREGAEI-HKDGEKIGVITS 382
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G PSP+L +NIAMGYI+ K G E+ V VR K VTKMPF+++ Y+
Sbjct: 383 GVPSPTLGRNIAMGYIKSGNQKAGTEVDVVVRGKARKGTVTKMPFIQTKYW 433
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 19/127 (14%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCT 503
K ++ G D+ L + GL+A+QGP S+ IL +D+DLS LYF +
Sbjct: 168 KYLDEELGKFGGDVQWSRL--DNSGLVALQGPQSAEILSEVLASDVDLSKLYFGNAVWAE 225
Query: 504 IAGI------PCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLSD---EDVKLAG 548
+ P ++R GYTGEDG EIS G E T ++ALLS E ++LAG
Sbjct: 226 LKLADGSKTHPVLISRGGYTGEDGFEISFNGKEYPAFETTTPAIQALLSKAGPERLQLAG 285
Query: 549 LGARDSL 555
LGARDSL
Sbjct: 286 LGARDSL 292
>gi|332526792|ref|ZP_08402894.1| glycine cleavage system T protein [Rubrivivax benzoatilyticus JA2]
gi|332111195|gb|EGJ11227.1| glycine cleavage system T protein [Rubrivivax benzoatilyticus JA2]
Length = 379
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 141/239 (58%), Gaps = 18/239 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+DLHLS G ++VPFAG++MPVQY + A H R+ ++FDVSHM Q ++G
Sbjct: 10 KTPLHDLHLSLGARLVPFAGYAMPVQY-RDGLIAEHRQCRNAAALFDVSHMGQVRLSGAD 68
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK----TLEDSLFLVSNASRR 313
LE++ DV +L G+ + FTNE GG+ DDL++++ T LFLV NA +
Sbjct: 69 AAAALETLVPVDVVDLAVGRQRYAFFTNEHGGLLDDLMISRPAPGTGFGDLFLVVNAGCK 128
Query: 314 KVDMDLMVAAQDRFKSLGKDI--HLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
D+ + L +I + ER L+A+QGPL++ L R + + L F
Sbjct: 129 DADL----------RHLQTNIGHRCTVVGLPERALLALQGPLAADALAR-LNPGVKDLVF 177
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
MT +A PC +TR+GYTGEDG EISVP E+ + ALL+ +VK AGLGARD+L
Sbjct: 178 MTGGVFELADAPCFVTRSGYTGEDGFEISVPAERAEALASALLALPEVKPAGLGARDTL 236
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGPL++ L R + + L FMT +A PC +TR+GYTGEDG EISVP
Sbjct: 150 ERALLALQGPLAADALAR-LNPGVKDLVFMTGGVFELADAPCFVTRSGYTGEDGFEISVP 208
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E+ + ALL+ +VK AGLGARD+L
Sbjct: 209 AERAEALASALLALPEVKPAGLGARDTL 236
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSG 69
PG R GG+PG + I+ + G RKR G VP+R G I +A+ +G +TSG
Sbjct: 270 PGGARE--GGYPGTAAIERHLAGGALRKRVGLVGLERVPVREGTAIVDAHGHALGRVTSG 327
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+P + + IAM Y+ ++ E++ VR KR+ ++VT MPF Y+
Sbjct: 328 TLAPGVDRPIAMAYLPRDHAAPEHEVYAEVRGKRLPMRVTAMPFQPHRYH 377
>gi|448091279|ref|XP_004197290.1| Piso0_004537 [Millerozyma farinosa CBS 7064]
gi|448095827|ref|XP_004198321.1| Piso0_004537 [Millerozyma farinosa CBS 7064]
gi|359378712|emb|CCE84971.1| Piso0_004537 [Millerozyma farinosa CBS 7064]
gi|359379743|emb|CCE83940.1| Piso0_004537 [Millerozyma farinosa CBS 7064]
Length = 393
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 139/244 (56%), Gaps = 19/244 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL++LH+ +GGKMVP+AGF MPV Y S SH R+K VFDVSHMLQ GK
Sbjct: 18 KTPLHELHIEYGGKMVPYAGFEMPVLYKGQSHIDSHNWVRNKAGVFDVSHMLQHNFRGKE 77
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ L+ I D+ L+ +L++ NEQGG+ DD I+T+ + ++V+NA R+ D+
Sbjct: 78 ASDLLQKITPIDLSGLEVNSSSLTVLLNEQGGVIDDCIITRHGPEQFYMVTNAGCREKDV 137
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF---MTS 374
+ + F + H F E L+A+QGP ++ +LQ+ T +L L F + S
Sbjct: 138 AFIKRELEAFDAQ----HETF----EGTLLALQGPEAAQVLQKFTPENLKKLTFGHTLFS 189
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLSD--EDVKLAGLGA 426
+ +I G + R+GYTGEDG E+S+P E+ +AL+ D + VK GL A
Sbjct: 190 KFSSIVGSDVHIARSGYTGEDGFELSIPSSTPQQTEEARQFFKALIEDFPDTVKPIGLAA 249
Query: 427 RDSL 430
RDSL
Sbjct: 250 RDSL 253
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 13 KRRRETGGFPGASIIQSQIK--SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGC 70
K RR+ F GAS I +QIK S S +R G TS G R G ++F+++ + VG ITSG
Sbjct: 283 KTRRDNASFNGASTILAQIKDKSLFSSRRVGLTSKGPSPREGSKVFSSSGEEVGYITSGS 342
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L NIA GY++ + K+G + + +R KR +TKMPFV S +Y
Sbjct: 343 PSPTLGGNIAQGYVDKSV-KLGSSVDIEIRGKRRPATLTKMPFVPSRFY 390
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 11/99 (11%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYF---MTSRPCTIAGIPCTLTRAGYTGEDGVEI 524
E L+A+QGP ++ +LQ+ T +L L F + S+ +I G + R+GYTGEDG E+
Sbjct: 155 EGTLLALQGPEAAQVLQKFTPENLKKLTFGHTLFSKFSSIVGSDVHIARSGYTGEDGFEL 214
Query: 525 SVPG------EQCTHIVEALLSD--EDVKLAGLGARDSL 555
S+P E+ +AL+ D + VK GL ARDSL
Sbjct: 215 SIPSSTPQQTEEARQFFKALIEDFPDTVKPIGLAARDSL 253
>gi|395733801|ref|XP_003776295.1| PREDICTED: aminomethyltransferase, mitochondrial [Pongo abelii]
Length = 347
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 130/214 (60%), Gaps = 18/214 (8%)
Query: 226 AVSITASHLHTRSKVSVFDVS-----HMLQTVVTGKHREEWLESICVADVHELDPGKGTL 280
AVS+ A H S++ F + QT + G R + +ES+ V D+ EL P +GTL
Sbjct: 4 AVSVVA---HLGSRLQAFSPALCRPFSCAQTKILGSDRVKLMESLVVGDIAELRPNQGTL 60
Query: 281 SLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSL---GKDIHLQ 337
SLFTNE GGI DDLIVT T E L++VSNA + D+ LM QD+ + L G+D+ L+
Sbjct: 61 SLFTNEAGGILDDLIVTSTSEGHLYVVSNAGCWEKDLALM---QDKVRELQNQGRDVGLE 117
Query: 338 FLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDG 396
L + L+A+QGP ++ +LQ DL L FMTS + G+ C +TR GYTGEDG
Sbjct: 118 VL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAVMEVFGVSGCRVTRCGYTGEDG 174
Query: 397 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
VEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 175 VEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 208
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 345
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 208
>gi|323456399|gb|EGB12266.1| hypothetical protein AURANDRAFT_20469 [Aureococcus anophagefferens]
Length = 414
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 138/255 (54%), Gaps = 21/255 (8%)
Query: 192 SPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRS--KVSVFDVSHML 249
S A +T LYDLHL GGKMVPFAG+ +PVQY + + H+H RS K S+FDVSHM
Sbjct: 19 SSDALLKTMLYDLHLERGGKMVPFAGYELPVQYAGIGVLKEHMHCRSPGKSSLFDVSHMG 78
Query: 250 QTVVTGKHREEWLESI-----------CVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK 298
Q TG R ++LE + V DV L G+G L+L TN +GGI DD ++
Sbjct: 79 QIKWTGADRAKFLERVRPRPASRAATAVVGDVAGLGDGEGRLTLLTNAEGGILDDCVLAN 138
Query: 299 TLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTIL 358
D +++V N + + DM + A D + G D+ + + ++ L+A+QG + +L
Sbjct: 139 A-GDYVYMVVNGACKVGDMAHLQALLD---ASGMDVQMHY-QGDDATLVALQGAGAPGVL 193
Query: 359 --QRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG-EQCTHIVEALLS 415
D++ FMT ++ G C +TR GYTGEDG EI+V + E LL
Sbjct: 194 LPLLPDGFDMTRFAFMTGVDTSVGGYACRVTRCGYTGEDGFEIAVADPANGVAVAELLLG 253
Query: 416 DEDVKLAGLGARDSL 430
E + GLGARDSL
Sbjct: 254 SEGCEPCGLGARDSL 268
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 36 SRKRTGFTSTGVPIRPGYEIFNA-NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE 94
+RKR GF P R G IF+A + +VG +TSG SP L K IAMG++E A +K G +
Sbjct: 326 ARKRVGFMGHAKPAREGTAIFDAAGETQVGVVTSGTVSPVLGKPIAMGFVETALAKKGTD 385
Query: 95 LWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
+ +R K++ +V MPFV+ NYY P+
Sbjct: 386 VTFDIRGKKIPSQVAPMPFVEPNYYRVPE 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQ--RHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
G D+ + + ++ L+A+QG + +L D++ FMT ++ G C +TR
Sbjct: 167 GMDVQMHYQG-DDATLVALQGAGAPGVLLPLLPDGFDMTRFAFMTGVDTSVGGYACRVTR 225
Query: 514 AGYTGEDGVEISVPG-EQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EI+V + E LL E + GLGARDSL
Sbjct: 226 CGYTGEDGFEIAVADPANGVAVAELLLGSEGCEPCGLGARDSL 268
>gi|429212416|ref|ZP_19203581.1| glycine cleavage system T protein [Pseudomonas sp. M1]
gi|428156898|gb|EKX03446.1| glycine cleavage system T protein [Pseudomonas sp. M1]
Length = 370
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 139/233 (59%), Gaps = 10/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLYDLHL G KMVPFAG+ MPVQY + + HLHTR++ +FDVSHM Q + G
Sbjct: 5 KTPLYDLHLELGAKMVPFAGYEMPVQY-PLGVLKEHLHTRARAGLFDVSHMGQLRLRGAD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ D+ +L G+ +LFTN +GGI DDL+V D LFLV NA+ + D+
Sbjct: 64 AAAALESLVPVDILDLPVGQQRYALFTNAEGGILDDLMVANA-GDHLFLVVNAACKDQDL 122
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
A R + +G ++ L + L+A+QGP ++ +L R + L FM
Sbjct: 123 -----AHLR-QHIGARCEIESLF-DSHALLALQGPAAAEVLARFAPA-VKDLTFMQVASV 174
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + ALL++E+V+ GLGARDSL
Sbjct: 175 ELLGAQCNVSRSGYTGEDGYEISVPAAHAEALARALLAEEEVQPIGLGARDSL 227
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA I +Q + GV+ KR G VP+R G EI +A+ +G ++SG PSL
Sbjct: 266 AGGFPGAERIFAQQREGVASKRVGLLPQERVPVREGAEIVDADGAVIGKVSSGGFGPSLG 325
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ A++ + E++ VR KRV +KV + PFV YY
Sbjct: 326 APVAMGYVASAHAALDSEVFAMVRGKRVPMKVARTPFVPQRYY 368
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+ L+A+QGP ++ +L R + L FM + G C ++R+GYTGEDG EISV
Sbjct: 140 DSHALLALQGPAAAEVLARFAPA-VKDLTFMQVASVELLGAQCNVSRSGYTGEDGYEISV 198
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++E+V+ GLGARDSL
Sbjct: 199 PAAHAEALARALLAEEEVQPIGLGARDSL 227
>gi|408380462|ref|ZP_11178046.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
albertimagni AOL15]
gi|407745675|gb|EKF57207.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
albertimagni AOL15]
Length = 379
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 138/239 (57%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT---VV 253
+RTPLYD H+S G KMVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q
Sbjct: 8 KRTPLYDFHVSLGAKMVPFAGYDMPVQYPA-GVLKEHLHTRAAAGLFDVSHMGQVELVAA 66
Query: 254 TGKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G + + + LE++ D+ L G+ FT++ GGI DDL++++ L + L +V NA
Sbjct: 67 SGTYDDAAKALETLVPVDILGLKDGRQRYGFFTDDNGGILDDLMISR-LGERLLVVVNAG 125
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ M A +Q L + R L+A+QGP + +L + D++++ F
Sbjct: 126 CKDADIAHMRAKLPD--------GVQVLVHDGRALLALQGPKAEAVLA-ALNSDVAAMKF 176
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M R ++ IP ++R GY+GEDG EISVP ++ + LL + + GLGARDSL
Sbjct: 177 MDVRELSLGDIPALVSRTGYSGEDGYEISVPADRAADFAKTLLDQPNCQPIGLGARDSL 235
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSL 75
GGFPGA I +++ +GVSR+R G G P+RP +F + + +G ++SG PS+
Sbjct: 275 GGFPGAERILAELDNGVSRRRVGLKPEGKAPVRPPARLFADAEGKTEIGQVSSGGFGPSV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ IAMGY+ A + G +++ VR K + + V+ +PF+ Y
Sbjct: 335 ESPIAMGYVPTAMAAPGTQVFAEVRGKLMPLTVSALPFITPTY 377
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 461 LQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGED 520
+Q L + R L+A+QGP + +L + D++++ FM R ++ IP ++R GY+GED
Sbjct: 142 VQVLVHDGRALLALQGPKAEAVLA-ALNSDVAAMKFMDVRELSLGDIPALVSRTGYSGED 200
Query: 521 GVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G EISVP ++ + LL + + GLGARDSL
Sbjct: 201 GYEISVPADRAADFAKTLLDQPNCQPIGLGARDSL 235
>gi|332215946|ref|XP_003257102.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 2
[Nomascus leucogenys]
Length = 347
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 119/185 (64%), Gaps = 10/185 (5%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
A + D+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL
Sbjct: 90 AGCWEKDLALM---QDKLRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDL 143
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
L FMTS + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL
Sbjct: 144 RKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLA 203
Query: 426 ARDSL 430
ARDSL
Sbjct: 204 ARDSL 208
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 67/109 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGINIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV + YYT
Sbjct: 297 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTKYYT 345
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKLRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 208
>gi|50303773|ref|XP_451833.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640965|emb|CAH02226.1| KLLA0B06754p [Kluyveromyces lactis]
Length = 393
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 145/260 (55%), Gaps = 14/260 (5%)
Query: 173 FLKFLSFFSGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITAS 232
L+F F S SPGS+ A ++T LYDLH+S GG MVPFAG+SMPV Y + S
Sbjct: 1 MLQFRRFNSS-----SPGSA--ALKKTALYDLHVSLGGTMVPFAGYSMPVLYKGATHIES 53
Query: 233 HLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQD 292
H TR +FDVSHMLQ+ + G E+L + D L+P GTLS+ NE GGI D
Sbjct: 54 HQWTREHAGLFDVSHMLQSTLKGPKSIEFLHKVTPTDFKALEPKNGTLSVLLNENGGIVD 113
Query: 293 DLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGP 352
D ++TK ++ ++V+NA + D + + +D + + + + L ++R L+A+QGP
Sbjct: 114 DTLITKINDEEFYIVTNAGCIERDTEFL---KDELSKISEGVSWETL--KDRSLLALQGP 168
Query: 353 LSSTILQRHTDL-DLSSLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIV 410
+ L + DL +LYF + I + R+GYTGEDG EISV + +
Sbjct: 169 QARYALAKLVKHGDLKTLYFGQRDDFELTENISAQVARSGYTGEDGFEISVLNKDAALLA 228
Query: 411 EALLSDEDVKLAGLGARDSL 430
+ LL +VK GL ARDSL
Sbjct: 229 QLLLDQPEVKPIGLAARDSL 248
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRK-RTGF--TSTGVPIRPGYEIFNANDQRVG 64
+I +R G F G I +QIK K R GF G R I N +D++VG
Sbjct: 275 VISKSRRDGSLGKFNGFDNIIAQIKDKSYDKVRVGFKYQGKGPAARQDTPILNDSDEQVG 334
Query: 65 AITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
+TSG SPSL NI Y++ K G +L V+VR K +++ KMP V ++YY P
Sbjct: 335 VVTSGSASPSLDGINIGQAYVKKGLHKKGTQLKVQVRKKTYPIEIVKMPLVPTHYYRP 392
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 467 EERGLIAVQGPLSSTILQRHTDL-DLSSLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEI 524
++R L+A+QGP + L + DL +LYF + I + R+GYTGEDG EI
Sbjct: 158 KDRSLLALQGPQARYALAKLVKHGDLKTLYFGQRDDFELTENISAQVARSGYTGEDGFEI 217
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
SV + + + LL +VK GL ARDSL
Sbjct: 218 SVLNKDAALLAQLLLDQPEVKPIGLAARDSL 248
>gi|343505627|ref|ZP_08743187.1| glycine cleavage system protein T2 [Vibrio ichthyoenteri ATCC
700023]
gi|342806735|gb|EGU41949.1| glycine cleavage system protein T2 [Vibrio ichthyoenteri ATCC
700023]
Length = 372
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 140/233 (60%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
TPL+ LH+ G KMVPFAG+ MPVQY + + HLHTR +FDVSHM Q + G
Sbjct: 7 NTPLHALHIEAGAKMVPFAGYDMPVQY-QLGVKKEHLHTREHAGLFDVSHMGQLRLKGAG 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+LE++ D+ +L G + FTN +GGI DDL+V L D LF+V NA+ + D+
Sbjct: 66 AAAFLETLVPVDIIDLAAGNQRYAFFTNSEGGIMDDLMVA-NLGDHLFVVVNAACKAHDI 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ A L + + L+ + E+R L+A+QGP + +LQR ++ + FM
Sbjct: 125 AHLQA------HLPQGVELEVI--EDRALLALQGPKAVDVLQR-LQPAVAEMIFMDVGQY 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP E + +ALL++E+V+ GLGARDSL
Sbjct: 176 ELLGAQCIVSRSGYTGEDGYEISVPSEHAKALAQALLAEEEVEWIGLGARDSL 228
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 18 TGGFPGASIIQSQIKSG-VSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA II +QI++ V+RKR G T P+R G E+F+ + ++G +TSG PS
Sbjct: 267 AGGFPGADIILTQIETKQVARKRVGLVGETKAPVREGCELFDGDANQIGIVTSGTAGPSA 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
K ++MGY+ ++ +G +++ +VR K + + + KMPFV YY
Sbjct: 327 GKPVSMGYVAVEFANIGTQVFAQVRGKMLPMTIEKMPFVPQRYY 370
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + +LQR ++ + FM + G C ++R+GYTGEDG EISV
Sbjct: 141 EDRALLALQGPKAVDVLQR-LQPAVAEMIFMDVGQYELLGAQCIVSRSGYTGEDGYEISV 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + +ALL++E+V+ GLGARDSL
Sbjct: 200 PSEHAKALAQALLAEEEVEWIGLGARDSL 228
>gi|114570761|ref|YP_757441.1| glycine cleavage system T protein [Maricaulis maris MCS10]
gi|114341223|gb|ABI66503.1| glycine cleavage system T protein [Maricaulis maris MCS10]
Length = 365
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 133/234 (56%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+TPL+ LH+ GGKMVPFAG+ MPVQY + I H H R + +FDVSHM Q G
Sbjct: 6 HKTPLHALHVELGGKMVPFAGYDMPVQY-PLGIMGEHKHCREQAGLFDVSHMGQARYVGD 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E LE++ D+ E+ G+ +L NE+GGI+DDL+V++ + ++LV NA+ + D
Sbjct: 65 --EAALEALLTCDLSEIGAGEQKYTLLPNERGGIRDDLMVSRPDGNGIYLVVNAATKDAD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ AA + GK + ER L+A+QGP + ++ R + FM
Sbjct: 123 FAHIEAA-----TAGKGTLTRI---PERALLALQGPAAKDVMARLCP-QACKMVFMQCGL 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G+ ++R+GYTGEDG EIS+P I LL+ ++V GLGARDSL
Sbjct: 174 FTLDGVEVMMSRSGYTGEDGFEISIPEADADRIARLLLAQDEVAAIGLGARDSL 227
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 68/117 (58%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
+ + L+ K RRE G FPGA +I +QI+ +KR G T TG P R G EI + +
Sbjct: 247 VEASLIWALAKTRRERGDFPGADVIATQIEEKTCQKRVGLTLTGAPAREGAEIADKSGNI 306
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G +TSG P++ +AMGY++ + G E+ + VR K +TK+PFV +N+Y
Sbjct: 307 IGIVTSGGFGPTVSGPVAMGYVDRDFMAPGTEVDILVRGKPRAAIITKLPFVPANFY 363
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGP + ++ R + FM T+ G+ ++R+GYTGEDG EIS+P
Sbjct: 141 ERALLALQGPAAKDVMARLCP-QACKMVFMQCGLFTLDGVEVMMSRSGYTGEDGFEISIP 199
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
I LL+ ++V GLGARDSL
Sbjct: 200 EADADRIARLLLAQDEVAAIGLGARDSL 227
>gi|212542493|ref|XP_002151401.1| glycine cleavage system T protein [Talaromyces marneffei ATCC
18224]
gi|210066308|gb|EEA20401.1| glycine cleavage system T protein [Talaromyces marneffei ATCC
18224]
Length = 485
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 146/259 (56%), Gaps = 29/259 (11%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RT LYDLHL +G KMVPFAGF MP+QY +S SH TR K S+FDVSHM+Q +TG
Sbjct: 74 RTQLYDLHLKYGAKMVPFAGFDMPLQYTDLSHAESHHWTREKASLFDVSHMVQHRLTGPG 133
Query: 258 REEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
L + + + +L TLS L + GGI DD ++T+ ++ + V+NA RR+ D
Sbjct: 134 ALPLLMKVTPSSLDKLANNTSTLSCLLEDGTGGIIDDTVITRQGPEAFYFVTNAGRREED 193
Query: 317 MDLMVAAQDRFKS-LGKD-IHLQFLSAEERGLIAVQGPLSSTILQRH---------TDLD 365
+ + A + +++ G D I + LS +R LIA+QGPL+ ++LQ + D
Sbjct: 194 LAFLTAEIEAYRTEHGADSIKWEILS--DRALIALQGPLAPSVLQSYIYTGEGEDPALTD 251
Query: 366 LSSLYFMTSRPCTIAGIP--------CTLTRAGYTGEDGVEISVPGEQCT-----HIVEA 412
L++LYF SR + +P ++R GYTGEDG EIS+P + E
Sbjct: 252 LNTLYFGQSRELYLQ-LPDGSKTAHRLLISRTGYTGEDGFEISIPTSDGATDLPYQVTEL 310
Query: 413 LLSDED-VKLAGLGARDSL 430
L+S D +LAGL ARDSL
Sbjct: 311 LISQPDKCRLAGLAARDSL 329
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 12 GKRRRE----TGGFPGASIIQSQI---KSGVSRKRTGFT-STGVPIRPGYEIF------- 56
GK RR+ F G+S+I +Q+ +S++R G T G P R G I
Sbjct: 358 GKERRDETSPASKFNGSSVILAQLAKPSKNISQRRIGLTIEKGAPAREGAIIVDPSSITE 417
Query: 57 -NANDQRVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFV 114
N ++G ITSG PSPSL NIAMGYI+ K G E+ V VR+K VT MP++
Sbjct: 418 ENKTPTQIGVITSGLPSPSLGGTNIAMGYIKNGLHKKGTEVAVLVRNKLRKATVTPMPWI 477
Query: 115 KSNYYTP 121
+S ++ P
Sbjct: 478 ESKFHRP 484
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 63/120 (52%), Gaps = 26/120 (21%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRH---------TDLDLSSLYFMTSRPCTIAGIP- 508
I + LS +R LIA+QGPL+ ++LQ + DL++LYF SR + +P
Sbjct: 213 IKWEILS--DRALIALQGPLAPSVLQSYIYTGEGEDPALTDLNTLYFGQSRELYLQ-LPD 269
Query: 509 -------CTLTRAGYTGEDGVEISVPGEQCT-----HIVEALLSDED-VKLAGLGARDSL 555
++R GYTGEDG EIS+P + E L+S D +LAGL ARDSL
Sbjct: 270 GSKTAHRLLISRTGYTGEDGFEISIPTSDGATDLPYQVTELLISQPDKCRLAGLAARDSL 329
>gi|424910337|ref|ZP_18333714.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392846368|gb|EJA98890.1| glycine cleavage system T protein [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 379
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A + TPL+ LHLS G +MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q +V
Sbjct: 5 AALKTTPLHSLHLSLGARMVPFAGYDMPVQYPA-GVLKEHLQTRTSAGLFDVSHMGQVIV 63
Query: 254 TGK-----HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
K + LE + D+ L G+ FT+E+G I DDL++T D LF+V
Sbjct: 64 KAKSGNNADAAQALEKLVPVDILGLKEGRQRYGFFTDEKGCILDDLMITNR-GDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D+ M A L + L E+R LIA+QGP + +L +S
Sbjct: 123 NAACKDADVAHMKA------HLSDSCEITLL--EDRALIALQGPRAEEVLAELW-TGVSE 173
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM + + + C ++R+GY+GEDG EISVP ++ I ALL D + GLGARD
Sbjct: 174 MKFMDVQEVPLHDVACIVSRSGYSGEDGFEISVPADKAEEIARALLEHPDCEAIGLGARD 233
Query: 429 SL---------SGDITLNTPVPHGSLKLSNDRFKSLGKD 458
SL DI T SL+ + + + G D
Sbjct: 234 SLRLEAGLCLYGNDIDTTTSPIEASLEWAIQKARRAGGD 272
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSL 75
GGFPGA I ++K G SR+R G G P+R ++F + + +G +TSG PS+
Sbjct: 275 GGFPGAERILGELKDGTSRRRVGLKPEGKAPVRGHSKLFADAEGKTEIGEVTSGGFGPSV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ +Y+ G ++ VR K + V V +PF+K Y
Sbjct: 335 EGPVAMGYVPVSYAAPGTAIFAEVRGKYLPVTVAALPFIKPTY 377
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R LIA+QGP + +L +S + FM + + + C ++R+GY+GEDG EISV
Sbjct: 148 EDRALIALQGPRAEEVLAELW-TGVSEMKFMDVQEVPLHDVACIVSRSGYSGEDGFEISV 206
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ I ALL D + GLGARDSL
Sbjct: 207 PADKAEEIARALLEHPDCEAIGLGARDSL 235
>gi|367020468|ref|XP_003659519.1| hypothetical protein MYCTH_2313750 [Myceliophthora thermophila ATCC
42464]
gi|347006786|gb|AEO54274.1| hypothetical protein MYCTH_2313750 [Myceliophthora thermophila ATCC
42464]
Length = 488
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 142/252 (56%), Gaps = 23/252 (9%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL+H KMVPF GF MPVQY A+ + SHL TR+ S+FDVSHM+Q V +G
Sbjct: 88 TPLHSLHLAHKAKMVPFGGFQMPVQYDALGVRESHLFTRAHASLFDVSHMVQRVFSGPGA 147
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNE--QGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + + + L + TLS + GGI DD ++T+ D ++V+NA+ R D
Sbjct: 148 ARFLQRVTPSGLEALPVHRSTLSCLLRDDGSGGIVDDCVITRLPGDRFYVVTNAACRDKD 207
Query: 317 MDLMVAAQDRFK--SLGKDIHLQFLSAEER----GLIAVQGPLSSTILQ---RHTDLDLS 367
+ D++ S D + EER GLIA+QGP ++ IL LDL+
Sbjct: 208 DAYLAREADKWNRSSPAAD---GWEVKEERWGLGGLIALQGPDAAGILAGVLEAGGLDLT 264
Query: 368 SLYFMTS--RPCTIAG----IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---ED 418
+ F S +AG P ++R GYTGEDG EIS+P E+ + EALL +
Sbjct: 265 QVLFGQSFFAKIRLAGGKVSSPVLVSRGGYTGEDGFEISIPAEEAIAVTEALLEAGGPDK 324
Query: 419 VKLAGLGARDSL 430
V+LAGLGARDSL
Sbjct: 325 VQLAGLGARDSL 336
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 73/122 (59%), Gaps = 11/122 (9%)
Query: 9 IFPGKRRRETGGFPGASIIQSQI------KSGVSRKRTGFTSTGVPIRPGYEIFN----A 58
I P +RR GF GA +I Q+ SGV+R+R G G P R G EI + +
Sbjct: 363 IIPKERRTADAGFYGAEVISKQLVSPAKGGSGVARRRIGLIVEGAPAREGAEIVSRAEGS 422
Query: 59 NDQ-RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
ND+ ++G +TSGCPSPSL KNIAMGY++ + K G E+ V VR + VTKMPFV +
Sbjct: 423 NDRIQLGVVTSGCPSPSLGKNIAMGYVKEGFHKAGTEVDVIVRGRPRKAVVTKMPFVPTK 482
Query: 118 YY 119
Y+
Sbjct: 483 YW 484
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 40/219 (18%)
Query: 351 GPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTG--EDGVEISVPGEQCTH 408
GP ++ LQR T L +L P + + C L G G +D V +PG++
Sbjct: 144 GPGAARFLQRVTPSGLEAL------PVHRSTLSCLLRDDGSGGIVDDCVITRLPGDRFYV 197
Query: 409 IVEALLSDEDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEE 468
+ A D+D AR++ ++P G ++ +R+ LG
Sbjct: 198 VTNAACRDKDDAYL---AREA--DKWNRSSPAADG-WEVKEERW-GLG------------ 238
Query: 469 RGLIAVQGPLSSTILQ---RHTDLDLSSLYFMTS--RPCTIAG----IPCTLTRAGYTGE 519
GLIA+QGP ++ IL LDL+ + F S +AG P ++R GYTGE
Sbjct: 239 -GLIALQGPDAAGILAGVLEAGGLDLTQVLFGQSFFAKIRLAGGKVSSPVLVSRGGYTGE 297
Query: 520 DGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
DG EIS+P E+ + EALL + V+LAGLGARDSL
Sbjct: 298 DGFEISIPAEEAIAVTEALLEAGGPDKVQLAGLGARDSL 336
>gi|114765193|ref|ZP_01444337.1| probable aminomethyltransferase (glycine cleavage system t protein)
[Pelagibaca bermudensis HTCC2601]
gi|114542468|gb|EAU45495.1| probable aminomethyltransferase (glycine cleavage system t protein)
[Roseovarius sp. HTCC2601]
Length = 375
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 143/237 (60%), Gaps = 13/237 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG- 255
+RTPL+DLHL+ G KMVPFAG+ MPVQY + + HLHTR+ +FDVSHM Q ++ G
Sbjct: 5 KRTPLHDLHLALGAKMVPFAGYDMPVQY-KLGVMKEHLHTRAAAGLFDVSHMGQVILRGD 63
Query: 256 --KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
K LE++ V L G+ LFTNEQGGI+DDL++ D LFLV NA+ +
Sbjct: 64 DPKAVALALETLVPVSVAGLAEGRQRYGLFTNEQGGIEDDLMIANR-GDHLFLVVNAACK 122
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D+ + A + K + + ++ E+R L+A+QGP + L + ++ + FM
Sbjct: 123 EADVARLRAGLEP-----KGVSVDYI--EDRALLALQGPGAEAALA-ALNPAVAEMRFMD 174
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EISVP + EALL+ + V+ GLGARDSL
Sbjct: 175 VATVELAGVEAWVSRSGYTGEDGYEISVPEGAAVALAEALLAQDTVEPIGLGARDSL 231
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPS 74
GGFPGA II S+I SG R G G P+R G +++ + VG ITSG P+
Sbjct: 270 AGGFPGADIILSEIASGAPSVRVGLKPEGRAPMREGIDLYERETGGEPVGRITSGGFGPT 329
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ + G+ L+ VR KR+ V+V +P VK +Y
Sbjct: 330 VGGPVAMGYVPAEQATPGMRLYGEVRGKRLPVEVVTLPHVKQSY 373
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + L + ++ + FM +AG+ ++R+GYTGEDG EISV
Sbjct: 144 EDRALLALQGPGAEAALA-ALNPAVAEMRFMDVATVELAGVEAWVSRSGYTGEDGYEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EALL+ + V+ GLGARDSL
Sbjct: 203 PEGAAVALAEALLAQDTVEPIGLGARDSL 231
>gi|397622026|gb|EJK66549.1| hypothetical protein THAOC_12525 [Thalassiosira oceanica]
Length = 419
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 132/240 (55%), Gaps = 12/240 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVS--ITASHLHTRS--KVSVFDVSHMLQTVV 253
+T L LH GG MVPFAG+ +PV Y + + HL R+ K S+FDVSHM Q
Sbjct: 39 KTALNTLHKQLGGDMVPFAGYELPVLYKGDNGGVMKEHLWCRADGKCSLFDVSHMGQLKW 98
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
GK R +LE I V D+ L G G LSL TN GGI DD ++T D +++V N + +
Sbjct: 99 HGKDRATFLEKIVVGDIGGLKDGAGCLSLVTNASGGIIDDTVITNA-GDYVYMVVNGATK 157
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYF 371
DM D+F D+ +++L + L+A+QGP ++ + + DL + F
Sbjct: 158 FGDMKHFQEQLDQFDG---DVTMEYLE-DSMQLLAIQGPGAAAAVSKLLPDAFDLERMAF 213
Query: 372 MTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
MT T+ GI C +TR GYTGEDG EI++P E I LL DE V GLGARDSL
Sbjct: 214 MTGTNTTLDGIDGCRITRCGYTGEDGFEIAMPAENAESIAAKLLEDETVNPTGLGARDSL 273
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 11 PGKRRRETGGFPGAS-IIQSQIK-SGVSRKRTGFTSTGVPIRPGYEIFNANDQ-RVGAIT 67
P RRR GGF G I++ K V++KR G P R G EI++ + ++G +T
Sbjct: 304 PKGRRRTEGGFLGVEHILKPDGKLQKVAKKRVGIMGMKAPAREGAEIYDVTGETKIGVVT 363
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SG SP LK+ IAMGY++ SK G E+ ++VR K + VTKMPFV+S YY P+
Sbjct: 364 SGTFSPCLKRPIAMGYVDTGLSKAGTEIRIKVRGKMQNAAVTKMPFVESRYYRVPE 419
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 434 ITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRH--TDLDL 491
+ +N G +K ++ D+ +++L + L+A+QGP ++ + + DL
Sbjct: 150 MVVNGATKFGDMKHFQEQLDQFDGDVTMEYLEDSMQ-LLAIQGPGAAAAVSKLLPDAFDL 208
Query: 492 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 550
+ FMT T+ GI C +TR GYTGEDG EI++P E I LL DE V GLG
Sbjct: 209 ERMAFMTGTNTTLDGIDGCRITRCGYTGEDGFEIAMPAENAESIAAKLLEDETVNPTGLG 268
Query: 551 ARDSL 555
ARDSL
Sbjct: 269 ARDSL 273
>gi|397496153|ref|XP_003818907.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 2 [Pan
paniscus]
Length = 347
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 119/185 (64%), Gaps = 10/185 (5%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
A + D+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL
Sbjct: 90 AGCWEKDLALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDL 143
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
L FMTS + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL
Sbjct: 144 RKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLA 203
Query: 426 ARDSL 430
ARDSL
Sbjct: 204 ARDSL 208
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 345
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 208
>gi|254485813|ref|ZP_05099018.1| glycine cleavage system T protein [Roseobacter sp. GAI101]
gi|214042682|gb|EEB83320.1| glycine cleavage system T protein [Roseobacter sp. GAI101]
Length = 381
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 149/274 (54%), Gaps = 23/274 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+TPLYDLHL GGKMVPFAG+SMPVQY + + HLHTR+ +FDVSHM Q ++TG
Sbjct: 12 HQTPLYDLHLELGGKMVPFAGYSMPVQY-PMGVMKEHLHTRAHAGLFDVSHMGQVMLTGA 70
Query: 257 HREE---WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ E++ DV L G+ LFTN+ GGI+DDL+ + D+LF+V NA+ +
Sbjct: 71 SWDAVATAFETLVPMDVLGLGDGRQRYGLFTNDAGGIEDDLMFARR-GDALFVVVNAACK 129
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ M +A L D+ + ++ +R LIA+QG ++ D + + FM
Sbjct: 130 GADIARMKSA------LEPDVTVTPIT--DRALIALQG-PAAEAALAALDPAAADMRFMD 180
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL--- 430
R + GI ++R+GYTGEDG EISVP + LL+ + V+ GLGARDSL
Sbjct: 181 FRTLNLDGIEAWVSRSGYTGEDGFEISVPDADAEALARRLLAIDGVEPIGLGARDSLRLE 240
Query: 431 ------SGDITLNTPVPHGSLKLSNDRFKSLGKD 458
DI T SL + + + G D
Sbjct: 241 AGLCLYGNDIDAQTNPVEASLTWAIQKVRRAGGD 274
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 67/104 (64%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GG+PG+ ++Q+ ++GV++KR G G P+R G ++++A + + VGA+TSG P+
Sbjct: 276 AGGYPGSEVVQAAFENGVTQKRVGLAPQGRAPMREGTQLYDAEEGGRLVGAVTSGSFGPT 335
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ Y+ V LW VR KR+ V V K+PFV +N+
Sbjct: 336 VGGPVAMGYVSDEYAGVDTALWGDVRGKRLPVHVAKLPFVAANF 379
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QG ++ D + + FM R + GI ++R+GYTGEDG EISVP
Sbjct: 151 DRALIALQG-PAAEAALAALDPAAADMRFMDFRTLNLDGIEAWVSRSGYTGEDGFEISVP 209
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ LL+ + V+ GLGARDSL
Sbjct: 210 DADAEALARRLLAIDGVEPIGLGARDSL 237
>gi|365922001|ref|ZP_09446243.1| aminomethyltransferase [Cardiobacterium valvarum F0432]
gi|364575064|gb|EHM52484.1| aminomethyltransferase [Cardiobacterium valvarum F0432]
Length = 367
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 131/237 (55%), Gaps = 12/237 (5%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S E+ T LYD H++HG K+VPFAG++MPVQY A I HL TR +FDVSHM Q +
Sbjct: 2 STEKHTALYDWHVAHGAKIVPFAGYAMPVQY-AEGIVKEHLWTREHAGLFDVSHMGQLTI 60
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+G LE + D+ L+ + +L N QGGI DDL++T+ D ++V NA+ +
Sbjct: 61 SGADVATSLERLLPVDLQGLEVNQQRYALLMNAQGGIDDDLMLTRRAND-FYVVVNAACK 119
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D + A D +++ E L+A+QGP + +L + + L FM
Sbjct: 120 DADFAKLQAGL-------PDCTVEWWP--ECALLALQGPEAVEVLAA-IEPKVRDLTFMH 169
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C ++R+GYTGEDG EISVP +AL SD VK GLGARDSL
Sbjct: 170 GGAFTLLGAECWVSRSGYTGEDGYEISVPNSNAAAFADALCSDARVKPIGLGARDSL 226
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSG 69
PG R GG+PGA I+ I++GVSRKR GF+ G P+R ++++ N ++VG ITSG
Sbjct: 260 PGGER--AGGYPGADIVARHIEAGVSRKRVGFSIEGRAPVRAHTDVYH-NGEKVGTITSG 316
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ + VG +L +VRDK V +++ MPFV+ +Y
Sbjct: 317 GFGATVNAPVAMGYVRTDLAAVGTKLTAKVRDKDVPIEIVAMPFVRKDY 365
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E L+A+QGP + +L + + L FM T+ G C ++R+GYTGEDG EISVP
Sbjct: 140 ECALLALQGPEAVEVLAA-IEPKVRDLTFMHGGAFTLLGAECWVSRSGYTGEDGYEISVP 198
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+AL SD VK GLGARDSL
Sbjct: 199 NSNAAAFADALCSDARVKPIGLGARDSL 226
>gi|410036960|ref|XP_003950156.1| PREDICTED: aminomethyltransferase, mitochondrial [Pan troglodytes]
Length = 347
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 119/185 (64%), Gaps = 10/185 (5%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
A + D+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL
Sbjct: 90 AGCWEKDLALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDL 143
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
L FMTS + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL
Sbjct: 144 RKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLA 203
Query: 426 ARDSL 430
ARDSL
Sbjct: 204 ARDSL 208
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 345
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 208
>gi|226291388|gb|EEH46816.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb18]
Length = 534
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 148/260 (56%), Gaps = 25/260 (9%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A ++T LYDLH++ KM PFAG+SMP+QY +S SH TR+K S+FDVSHM+Q +
Sbjct: 127 ALKKTQLYDLHITRKAKMGPFAGYSMPLQYADLSHIESHHWTRTKASLFDVSHMVQHHIR 186
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKTLEDSLFLVSNASRR 313
G + L + + ++ L + TLS +E+ GGI DD ++T+ +S ++V+NA RR
Sbjct: 187 GPGALDLLMKVTPSSLNLLHDNRSTLSCLLDEKTGGIIDDTVITRLGPESFYIVTNAGRR 246
Query: 314 KVDMDLMVAAQDRFKS----LGKDIHLQFLSAEERGLIAVQGPLSSTILQR-------HT 362
K D++ + D F+ ++ + + + R L+A+QGP S+ +LQ
Sbjct: 247 KEDLEFLQKEIDEFRQSHDPSSRESVINWSILDSRALVALQGPSSAAVLQSLITPGEASI 306
Query: 363 DLDLSSLYFMTSRPCTIAGIP--------CTLTRAGYTGEDGVEISVPGEQ----CTHIV 410
D DLS+L+F SR + +P ++R GYTGEDG EIS+P + +
Sbjct: 307 DSDLSTLHFGQSRSLHL-NLPDGTHTPSRLLISRTGYTGEDGFEISIPTDNDPQLPIKVS 365
Query: 411 EALLSDEDVKLAGLGARDSL 430
E LS+ +V+LAGL RDSL
Sbjct: 366 ELFLSNPEVRLAGLAVRDSL 385
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAND--Q 61
GK RR+ F GA++I Q++S + +R G T G P R G I + D
Sbjct: 414 GKDRRDPSSPASSFNGAAVILPQLESPAKTLKERRVGLTIEAGPPAREGAPIVDIADGTT 473
Query: 62 RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+VG +TSG PSP+L NIAMGY++ K G E+ V VR K VT MPFV + +Y
Sbjct: 474 QVGVVTSGLPSPTLGGTNIAMGYVKQGLHKRGTEVGVLVRKKLRKATVTPMPFVPNKFY 532
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 20/108 (18%)
Query: 467 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTIAGIP--------CTL 511
+ R L+A+QGP S+ +LQ D DLS+L+F SR + +P +
Sbjct: 279 DSRALVALQGPSSAAVLQSLITPGEASIDSDLSTLHFGQSRSLHL-NLPDGTHTPSRLLI 337
Query: 512 TRAGYTGEDGVEISVPGEQ----CTHIVEALLSDEDVKLAGLGARDSL 555
+R GYTGEDG EIS+P + + E LS+ +V+LAGL RDSL
Sbjct: 338 SRTGYTGEDGFEISIPTDNDPQLPIKVSELFLSNPEVRLAGLAVRDSL 385
>gi|254461511|ref|ZP_05074927.1| glycine cleavage system T protein [Rhodobacterales bacterium
HTCC2083]
gi|206678100|gb|EDZ42587.1| glycine cleavage system T protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 371
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 133/237 (56%), Gaps = 19/237 (8%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
TPL+DLH+ G KMVPFAG+SMPVQ+ + + HLHTR K +FDVSHM Q V+G
Sbjct: 6 ETPLHDLHVQLGAKMVPFAGYSMPVQF-PLGVMKEHLHTREKAGLFDVSHMGQVKVSGAM 64
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ L + + TNEQGGI DDL++ D +F+V NA+ + D+
Sbjct: 65 AAAALETLIPVDIEGLAENRQRYGMLTNEQGGIMDDLMLANR-GDHIFVVVNAACKGADI 123
Query: 318 DLMVAAQDRFKSLGKDIHLQ----FLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
M A HL+ +R L+A+QGP S +L D + + FM
Sbjct: 124 AHMKA------------HLEPEVIVTEIADRALLALQGPASEAVLST-LDPRAADMTFMD 170
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP + EALL+ EDV+ GLGARDSL
Sbjct: 171 VATLDLNGAECWVSRSGYTGEDGYEISVPNADAVALAEALLAHEDVEAIGLGARDSL 227
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA II Q+++G RKR G G P+R G E+F ++ +G ITSG P+
Sbjct: 266 AGGFPGADIISVQMENGAPRKRVGLLPEGRAPMREGVELFATSEGGTSIGTITSGGFGPT 325
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMG I +SK+G ++ +R KR+ + +TKMPF +N+
Sbjct: 326 VAGPVAMGLISADHSKLGATIYGELRGKRLPLTITKMPFTPANF 369
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 456 GKDI-HLQ-FLSPE-------ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAG 506
G DI H++ L PE +R L+A+QGP S +L D + + FM + G
Sbjct: 120 GADIAHMKAHLEPEVIVTEIADRALLALQGPASEAVLST-LDPRAADMTFMDVATLDLNG 178
Query: 507 IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
C ++R+GYTGEDG EISVP + EALL+ EDV+ GLGARDSL
Sbjct: 179 AECWVSRSGYTGEDGYEISVPNADAVALAEALLAHEDVEAIGLGARDSL 227
>gi|241764044|ref|ZP_04762083.1| glycine cleavage system T protein [Acidovorax delafieldii 2AN]
gi|241366649|gb|EER61121.1| glycine cleavage system T protein [Acidovorax delafieldii 2AN]
Length = 377
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 131/232 (56%), Gaps = 10/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH+ G +MVPFAG+SMPVQY A + A HLHTR +FDVSHM Q + G
Sbjct: 11 TPLNALHIELGARMVPFAGYSMPVQYPA-GLMAEHLHTRQAAGLFDVSHMGQLRLVGPDA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
ES+ DV +L GK L N+ GGI DDL+ + D LF++ N + + D+
Sbjct: 70 ATAFESLMPVDVIDLPVGKQRYGLLLNDDGGIIDDLMFFRVARDELFVIVNGACKVGDIA 129
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A +G+ Q + + L+A+QGP ++ L R + L FMT T
Sbjct: 130 HIQA------RIGQ--RCQVVPLPDHALLALQGPQAAAALARLAP-GVEKLVFMTGSRFT 180
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
IAG C +TR+GYTGEDG EISVP Q + ALL+ +VK GLGAR+SL
Sbjct: 181 IAGCDCFVTRSGYTGEDGFEISVPAAQAETLARALLALPEVKPIGLGARNSL 232
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIK--SGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +Q+ + ++RKR G + VP+R E+ N + Q++G +TSG P+
Sbjct: 271 AGGFPGADKVLAQLDNPASLTRKRVGLVALERVPVREHTELQNLDGQKIGEVTSGLLGPT 330
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ K +A+GY++PA++ +G + VR K V ++V+ MPFV + YY
Sbjct: 331 IDKPVAIGYVQPAFAALGTRVNAIVRGKAVPMEVSAMPFVPTRYY 375
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
Q + + L+A+QGP ++ L R + L FMT TIAG C +TR+GYTGEDG
Sbjct: 140 QVVPLPDHALLALQGPQAAAALARLAP-GVEKLVFMTGSRFTIAGCDCFVTRSGYTGEDG 198
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP Q + ALL+ +VK GLGAR+SL
Sbjct: 199 FEISVPAAQAETLARALLALPEVKPIGLGARNSL 232
>gi|225679650|gb|EEH17934.1| aminomethyltransferase [Paracoccidioides brasiliensis Pb03]
Length = 491
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 148/260 (56%), Gaps = 25/260 (9%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A ++T LYDLH++ KM PFAG+SMP+QY +S SH TR+K S+FDVSHM+Q +
Sbjct: 84 ALKKTQLYDLHITRKAKMGPFAGYSMPLQYADLSHIESHHWTRTKASLFDVSHMVQHHIR 143
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQ-GGIQDDLIVTKTLEDSLFLVSNASRR 313
G + L + + ++ L + TLS +E+ GGI DD ++T+ +S ++V+NA RR
Sbjct: 144 GPGALDLLMKVTPSSLNLLHDNRSTLSCLLDEKTGGIIDDTVITRLGPESFYIVTNAGRR 203
Query: 314 KVDMDLMVAAQDRFKS----LGKDIHLQFLSAEERGLIAVQGPLSSTILQR-------HT 362
K D++ + D F+ ++ + + + R L+A+QGP S+ +LQ
Sbjct: 204 KEDLEFLQKEIDEFRQSHDPSSRESVINWSILDSRALVALQGPSSAAVLQSLITPGEASI 263
Query: 363 DLDLSSLYFMTSRPCTIAGIP--------CTLTRAGYTGEDGVEISVPGEQCTH----IV 410
D DLS+L+F SR + +P ++R GYTGEDG EIS+P + +
Sbjct: 264 DSDLSTLHFGQSRSLHL-NLPDGTHTPSRLLISRTGYTGEDGFEISIPTDNDPQLPIKVS 322
Query: 411 EALLSDEDVKLAGLGARDSL 430
E LS+ +V+LAGL RDSL
Sbjct: 323 ELFLSNPEVRLAGLAVRDSL 342
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAND--Q 61
GK RR+ F GA++I Q++S + +R G T G P R G I + D
Sbjct: 371 GKDRRDPSSPASSFNGAAVILPQLESPAKTLKERRVGLTIEAGPPAREGAPIVDIADGTT 430
Query: 62 RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+VG +TSG PSP+L NIAMGY++ K G E+ V VR K VT MPFV + +Y
Sbjct: 431 QVGVVTSGLPSPTLGGTNIAMGYVKQGLHKRGTEVGVLVRKKLRKATVTPMPFVPNKFY 489
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 20/108 (18%)
Query: 467 EERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTIAGIP--------CTL 511
+ R L+A+QGP S+ +LQ D DLS+L+F SR + +P +
Sbjct: 236 DSRALVALQGPSSAAVLQSLITPGEASIDSDLSTLHFGQSRSLHL-NLPDGTHTPSRLLI 294
Query: 512 TRAGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
+R GYTGEDG EIS+P + + E LS+ +V+LAGL RDSL
Sbjct: 295 SRTGYTGEDGFEISIPTDNDPQLPIKVSELFLSNPEVRLAGLAVRDSL 342
>gi|440226757|ref|YP_007333848.1| glycine cleavage system T protein [Rhizobium tropici CIAT 899]
gi|440038268|gb|AGB71302.1| glycine cleavage system T protein [Rhizobium tropici CIAT 899]
Length = 378
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 154/277 (55%), Gaps = 26/277 (9%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A + TPL+ LH+S G +MVPFAG+ MPVQY A + HL TRS +FDVSHM Q +
Sbjct: 5 AALKTTPLHALHVSLGARMVPFAGYDMPVQY-APGVLKEHLWTRSSAGLFDVSHMGQVTI 63
Query: 254 ---TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+GK+ + L ES+ D+ L + FT+++GGI DDL++ ++D LF+V
Sbjct: 64 RARSGKYEDAALALESLVPVDILGLAENRQRYGFFTDDKGGILDDLMIAH-MDDYLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ ++ D + QD +G + L +R LIA+QGP + +L D++
Sbjct: 123 NAACKEQDFKHL---QDH---IGDSCEVTLL---DRALIALQGPRAVDVLAELW-ADIAY 172
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R C + + C ++R+GY+GEDG EISVP ++ I + LL DV+ GLGARD
Sbjct: 173 MKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVPADKAEDIAKRLLEHPDVQPIGLGARD 232
Query: 429 SL---------SGDITLNTPVPHGSLKLSNDRFKSLG 456
SL DI T G+L+ + + + G
Sbjct: 233 SLRLEAGLCLYGNDIDQTTTPIEGALEWAIQKARKTG 269
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D++ + FM R C + + C ++R+GY+GEDG EISVP
Sbjct: 148 DRALIALQGPRAVDVLAELW-ADIAYMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVP 206
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ I + LL DV+ GLGARDSL
Sbjct: 207 ADKAEDIAKRLLEHPDVQPIGLGARDSL 234
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA+ I ++ G +R+R G G P+R +++ + + +G +TSG PS
Sbjct: 273 AGGFPGATRILGELDGGTTRRRVGLKPEGKAPVRGHSKLYAEAEGKTEIGEVTSGGFGPS 332
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ ++ G ++ VR K + V V+ +PF+K Y
Sbjct: 333 VESPVAMGYVPTDFAAPGTTVYAEVRGKYLPVVVSTLPFIKPTY 376
>gi|426340541|ref|XP_004034187.1| PREDICTED: aminomethyltransferase, mitochondrial-like isoform 2
[Gorilla gorilla gorilla]
gi|426340547|ref|XP_004034190.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 2 [Gorilla
gorilla gorilla]
Length = 347
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 116/182 (63%), Gaps = 4/182 (2%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKILGSDRVKLMESLVVGDIAELGPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A + D+ LM ++ G+D+ L+ L + L+A+QGP ++ +LQ DL L
Sbjct: 90 AGCWEKDLALMQDNVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKL 146
Query: 370 YFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
FMTS + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARD
Sbjct: 147 PFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARD 206
Query: 429 SL 430
SL
Sbjct: 207 SL 208
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 345
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDNVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATALLKNPEVKLAGLAARDSL 208
>gi|365766531|gb|EHN08027.1| Gcv1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 400
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 138/244 (56%), Gaps = 11/244 (4%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S ++T L+DLH+S GG MVP+AG+SMPV Y + SH TR+ +FDVSHMLQ+ +
Sbjct: 14 STLKKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKL 73
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS-LFLVSNASR 312
+G H ++L+ + D + L G GTLS+ N QGG+ DD I+TK +D+ ++V+NA
Sbjct: 74 SGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNAGC 133
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLS 367
+ D + D ++ G + Q+ E R L+A+QGP + +L+ DL
Sbjct: 134 AERDTEFF---HDELQN-GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLK 189
Query: 368 SLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
L+F + G + R GYTGEDG EIS+ E+ E LL++ +K GL A
Sbjct: 190 ELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAA 249
Query: 427 RDSL 430
RDSL
Sbjct: 250 RDSL 253
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 21 FPGASIIQSQIKSGV-SRKRTGFT--STGVPIRPGYEIFNAN-DQRVGAITSGCPSPSLK 76
F G + I Q+ + S+ R GF G R G +IF + + VG +TSG SP+L
Sbjct: 295 FNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLN 354
Query: 77 K-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
NI Y++ Y K G +L V+VR+K +++ KMP V ++YY
Sbjct: 355 NINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYY 398
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPCTIA-GIPC 509
G + Q+ E R L+A+QGP + +L+ DL L+F + G
Sbjct: 148 GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLKELFFGQRHEFALKDGSLV 207
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R GYTGEDG EIS+ E+ E LL++ +K GL ARDSL
Sbjct: 208 QIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAARDSL 253
>gi|6320222|ref|NP_010302.1| glycine decarboxylase subunit T [Saccharomyces cerevisiae S288c]
gi|1707880|sp|P48015.2|GCST_YEAST RecName: Full=Aminomethyltransferase, mitochondrial; AltName:
Full=Glycine cleavage system T protein; Short=GCVT;
AltName: Full=Glycine decarboxylase complex subunit T;
Flags: Precursor
gi|840872|emb|CAA89844.1| Gcv1p [Saccharomyces cerevisiae]
gi|1216226|emb|CAA65211.1| glycine cleavage T protein [Saccharomyces cerevisiae]
gi|1431446|emb|CAA98840.1| GCV1 [Saccharomyces cerevisiae]
gi|151942007|gb|EDN60363.1| glycine decarboxylase complex T subunit [Saccharomyces cerevisiae
YJM789]
gi|190405007|gb|EDV08274.1| glycine decarboxylase complex T subunit [Saccharomyces cerevisiae
RM11-1a]
gi|256273257|gb|EEU08200.1| Gcv1p [Saccharomyces cerevisiae JAY291]
gi|259145264|emb|CAY78528.1| Gcv1p [Saccharomyces cerevisiae EC1118]
gi|285811041|tpg|DAA11865.1| TPA: glycine decarboxylase subunit T [Saccharomyces cerevisiae
S288c]
gi|392300132|gb|EIW11223.1| Gcv1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 400
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 138/244 (56%), Gaps = 11/244 (4%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S ++T L+DLH+S GG MVP+AG+SMPV Y + SH TR+ +FDVSHMLQ+ +
Sbjct: 14 STLKKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKL 73
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS-LFLVSNASR 312
+G H ++L+ + D + L G GTLS+ N QGG+ DD I+TK +D+ ++V+NA
Sbjct: 74 SGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNAGC 133
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLS 367
+ D + D ++ G + Q+ E R L+A+QGP + +L+ DL
Sbjct: 134 AERDTEFF---HDELQN-GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLK 189
Query: 368 SLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
L+F + G + R GYTGEDG EIS+ E+ E LL++ +K GL A
Sbjct: 190 ELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAA 249
Query: 427 RDSL 430
RDSL
Sbjct: 250 RDSL 253
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 21 FPGASIIQSQIKSGV-SRKRTGFT--STGVPIRPGYEIFNAN-DQRVGAITSGCPSPSLK 76
F G + I Q+ + S+ R GF G R G +IF + + VG +TSG SP+L
Sbjct: 295 FNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLN 354
Query: 77 K-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
NI Y++ Y K G +L V+VR+K +++ KMP V ++YY
Sbjct: 355 NINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYY 398
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPCTIA-GIPC 509
G + Q+ E R L+A+QGP + +L+ DL L+F + G
Sbjct: 148 GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLKELFFGQRHEFALKDGSLV 207
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R GYTGEDG EIS+ E+ E LL++ +K GL ARDSL
Sbjct: 208 QIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAARDSL 253
>gi|254284012|ref|ZP_04958980.1| glycine cleavage system T protein [gamma proteobacterium NOR51-B]
gi|219680215|gb|EED36564.1| glycine cleavage system T protein [gamma proteobacterium NOR51-B]
Length = 371
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 126/233 (54%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL LH G K+VPFAG+ MPVQ+ + I H HTR +FDVSHM Q V+ G
Sbjct: 7 QTPLTPLHRELGAKLVPFAGYEMPVQF-SDGILKEHRHTREAAGLFDVSHMGQVVIRGDV 65
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ AD+ L SL N++GG+ DDLI+T+ +DS FLV NA
Sbjct: 66 ATAELEALVPADLAALPDHHAVYSLLLNQEGGVLDDLIITRWADDSFFLVVNA------- 118
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
D VA D ++ L+ L E R L+AVQGP + +L D + L FMT
Sbjct: 119 DCKVADVDHLRAHLPGCSLEVL--ENRALLAVQGPRAREVLSALCP-DAAELVFMTGVEA 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+P ++ GYTGEDG E+S+P + + LL V GLGARDSL
Sbjct: 176 AIDGVPVYVSCCGYTGEDGFELSIPAAEAERLATLLLDQPGVAPIGLGARDSL 228
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+AVQGP + +L D + L FMT I G+P ++ GYTGEDG E+S+
Sbjct: 141 ENRALLAVQGPRAREVLSALCP-DAAELVFMTGVEAAIDGVPVYVSCCGYTGEDGFELSI 199
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL V GLGARDSL
Sbjct: 200 PAAEAERLATLLLDQPGVAPIGLGARDSL 228
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTGV-PIRPGYEIFNANDQRVGAITSGCPSPSLKK 77
GG+PGA II Q + G+ +R G G P+R G + + + Q +G I+S S+
Sbjct: 268 GGYPGAQIINRQWREGIGERRVGLRVKGKRPVRDGQLVCDQSGQAIGRISSSAFGASVGA 327
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
IAM ++ ++ G + V VR K V +V MPFV YY
Sbjct: 328 PIAMAFVAVDHATAGTLVQVDVRGKIVMAEVVPMPFVPPRYY 369
>gi|220925863|ref|YP_002501165.1| glycine cleavage system T protein [Methylobacterium nodulans ORS
2060]
gi|219950470|gb|ACL60862.1| glycine cleavage system T protein [Methylobacterium nodulans ORS
2060]
Length = 380
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 139/242 (57%), Gaps = 21/242 (8%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A ++TPL+DLH G +MVPFAG++MP+ Y A + HLHTR+ +FDVSHM Q +
Sbjct: 10 ALRQTPLHDLHQRLGARMVPFAGYAMPLHYPA-GLLKEHLHTRAAAGLFDVSHMGQIALR 68
Query: 255 GKHREE---WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
G + LES+ AD+ L G+ L T+ GGI DDL++ ++ D L LV NA+
Sbjct: 69 GDDLSQIALALESVIPADLLGLSDGRQRYGLLTDASGGILDDLMIARS-GDGLVLVVNAA 127
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHL-QFLSAEE--RGLIAVQGPLSSTILQRHTDLDLSS 368
++ D + A HL +++ EE R L+A+QG ++ ++
Sbjct: 128 NKQADAAYLRA------------HLPAWITIEELPRALLALQG-PAAEAAMAELAPEIVQ 174
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM RP T+ GIPC +TR+GYTGEDG EISVP + I EALL+ V GLGARD
Sbjct: 175 MRFMDVRPVTLLGIPCLVTRSGYTGEDGFEISVPADGAETIAEALLAKPAVLPVGLGARD 234
Query: 429 SL 430
+L
Sbjct: 235 TL 236
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
R L+A+QG ++ ++ + FM RP T+ GIPC +TR+GYTGEDG EISVP
Sbjct: 151 RALLALQG-PAAEAAMAELAPEIVQMRFMDVRPVTLLGIPCLVTRSGYTGEDGFEISVPA 209
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
+ I EALL+ V GLGARD+L
Sbjct: 210 DGAETIAEALLAKPAVLPVGLGARDTL 236
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQ-RVGAITSGCPSPSLKKN 78
FPGA I ++++GV+R+R G G P+R G + A D R+G +TSG PSL
Sbjct: 278 FPGAERILHELEAGVARRRVGLRPQGRTPVRAGASLHAAADGIRLGHVTSGSFGPSLGGP 337
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ AY+ G ++ VR +R+ + VT +PF + +
Sbjct: 338 VAMGYLPTAYTDSGTCVFAEVRGQRLPLTVTSLPFHPAGF 377
>gi|402772602|ref|YP_006592139.1| aminomethyltransferase [Methylocystis sp. SC2]
gi|401774622|emb|CCJ07488.1| Aminomethyltransferase [Methylocystis sp. SC2]
Length = 384
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 136/242 (56%), Gaps = 14/242 (5%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++P A + PL H G +M PFAG+ MP+QY I A LHTR + S+FDVSHM Q
Sbjct: 9 AAPPALSKLPLDAAHRRLGARMAPFAGYDMPLQY-EQGIVAETLHTRRRASLFDVSHMGQ 67
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKT--LEDSLFLVS 308
++ G LES+ AD+ L P + + NE+GGI DDL+VT+ +E+ L LV
Sbjct: 68 AILAGARAARALESLTPADLASLSPERTRYTQLLNERGGILDDLLVTRLPGVEERLLLVV 127
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NASR++ D L+ AA +F + +R L+A+QGP ++++L
Sbjct: 128 NASRKQADFALIAAALPQFD----------FNPLDRALLALQGPRAASVLGALLP-GAED 176
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
L FM R G P ++R+GYTGEDG E+S+ E + LLS EDV AGLGARD
Sbjct: 177 LPFMGWRAFDFGGAPLFVSRSGYTGEDGFELSLRAEHAEDLARLLLSYEDVAPAGLGARD 236
Query: 429 SL 430
+L
Sbjct: 237 AL 238
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGC 70
GKRRR GGFPG I+ ++ G +R+R G + P+R G E+ + G +TSG
Sbjct: 267 GKRRRIEGGFPGFERIRIALEQGPARRRVGLEPQSKAPLREGAELSARDGAPAGHVTSGG 326
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRKVK 128
SP+L++ IAMGY+ + + +G L +RD+RVDV V +PFV Y+ P + +
Sbjct: 327 FSPTLQRPIAMGYVASSNANLGATLSAPLRDRRVDVTVAALPFVPHRYFKTPAGKDAR 384
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 462 QF-LSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGED 520
QF +P +R L+A+QGP ++++L L FM R G P ++R+GYTGED
Sbjct: 145 QFDFNPLDRALLALQGPRAASVLGALLP-GAEDLPFMGWRAFDFGGAPLFVSRSGYTGED 203
Query: 521 GVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G E+S+ E + LLS EDV AGLGARD+L
Sbjct: 204 GFELSLRAEHAEDLARLLLSYEDVAPAGLGARDAL 238
>gi|90419837|ref|ZP_01227746.1| glycine cleavage system T protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335878|gb|EAS49626.1| glycine cleavage system T protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 380
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 151/280 (53%), Gaps = 27/280 (9%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A TPL LH++ G +MVPFAG+SMPVQY A + HLHTR+ +FDVSHM Q +
Sbjct: 5 NALHTTPLDALHVALGARMVPFAGYSMPVQYSA-GVMKEHLHTRAAAGLFDVSHMGQVAI 63
Query: 254 TGKHREEW-----LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
K + LE++ DV L G+ ++FTN GGI DDL++ D LFLV
Sbjct: 64 RPKSGDLADAALALETLVPVDVAGLKEGRQRYAVFTNADGGILDDLMIANR-GDHLFLVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D+ + A G + + +R L+A+QGP + L + ++
Sbjct: 123 NAACKDQDIAHLRA--------GLEDTCEVEPLTDRALLALQGPAAEAALAT-LNPAVAE 173
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R + G C ++R+GYTGEDG EIS+P + + +ALL+ E V+ GLGARD
Sbjct: 174 MRFMDLRALDLVGAACIVSRSGYTGEDGYEISIPADAAEKLAKALLALETVEPIGLGARD 233
Query: 429 SL---------SGDI-TLNTPVPHGSLKLSNDRFKSLGKD 458
SL D+ T TPV G+L+ S + + G D
Sbjct: 234 SLRLEAGLCLYGNDVDTTTTPV-EGALEWSMQKVRKAGGD 272
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPSL 75
GGFPGA II Q+ G +R+R G G P+R G +F + VG +TSG P+L
Sbjct: 275 GGFPGADIILKQLAEGATRRRVGLLPEGRAPVRGGTSLFAEAEGGAPVGTVTSGGFGPTL 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ + G L+ VR KR+ V VT +PFV Y
Sbjct: 335 EAPVAMGYVPAELAGSGTRLFAEVRGKRLAVTVTPLPFVTPGY 377
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + L + ++ + FM R + G C ++R+GYTGEDG EIS+P
Sbjct: 149 DRALLALQGPAAEAALAT-LNPAVAEMRFMDLRALDLVGAACIVSRSGYTGEDGYEISIP 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + +ALL+ E V+ GLGARDSL
Sbjct: 208 ADAAEKLAKALLALETVEPIGLGARDSL 235
>gi|227872936|ref|ZP_03991238.1| aminomethyltransferase [Oribacterium sinus F0268]
gi|227841222|gb|EEJ51550.1| aminomethyltransferase [Oribacterium sinus F0268]
Length = 380
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 138/239 (57%), Gaps = 11/239 (4%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLY+ H+ GGK+VPFAGF +PVQY + H+ R++ +FDVSHM + + G
Sbjct: 19 ELKTPLYEAHVKAGGKIVPFAGFLLPVQYEQSGVIKEHMAVRTEAGLFDVSHMGEVLCKG 78
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
K L+ I + + G+ SL NE GG+ DDLIV K ++ F+V NA+ R+
Sbjct: 79 KDALANLQKILTNNFENMVDGQARYSLMCNENGGVVDDLIVYKKGDNDYFIVVNAANREK 138
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTS 374
D + MV Q +F D+ +S ++ IA+QGP + I++R T + ++ Y+
Sbjct: 139 DFNWMV--QHKF----GDVEFTNVS-DDYAQIALQGPKAMDIIRRLTSEENIPQKYYHAV 191
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
T+ GIPC +++ GYTGEDGVE+ + + + + LL+ +E + GLGARD+L
Sbjct: 192 FNATVDGIPCIVSKTGYTGEDGVELYLDSSKAEEMWDKLLAAGKEEGLIPCGLGARDTL 250
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
IA+QGP + I++R T + ++ Y+ T+ GIPC +++ GYTGEDGVE+ + +
Sbjct: 163 IALQGPKAMDIIRRLTSEENIPQKYYHAVFNATVDGIPCIVSKTGYTGEDGVELYLDSSK 222
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ + LL+ +E + GLGARD+L
Sbjct: 223 AEEMWDKLLAAGKEEGLIPCGLGARDTL 250
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIA 80
F G + I+++ + + KR G TG + ++ A DQ +G TSG P L +
Sbjct: 285 FIGKAAIEAKGEPKI--KRVGLKVTGRGVIREHQDVLAGDQVIGHTTSGTHCPFLNYPVG 342
Query: 81 MGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
M I+P Y++VG +L V VR ++VDV+V +PF K
Sbjct: 343 MALIDPKYAEVGTQLQVDVRGRKVDVEVVALPFYK 377
>gi|258543779|ref|ZP_05704013.1| glycine cleavage system T protein [Cardiobacterium hominis ATCC
15826]
gi|258521015|gb|EEV89874.1| glycine cleavage system T protein [Cardiobacterium hominis ATCC
15826]
Length = 367
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S E+ T LY H++ G K+VPFAG++MPVQY I HL TR +FDVSHM Q +V
Sbjct: 2 STEKHTALYGWHVARGAKIVPFAGYAMPVQY-EDGIVKEHLWTREHAGLFDVSHMGQVLV 60
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G LE + D+ L G+ +L N QGGI DDL++T+ ED ++V NA+ +
Sbjct: 61 HGADVAASLERLLPVDLQGLAVGQQRYALLMNAQGGIDDDLMLTRRAED-FYVVVNAACK 119
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D + ++ D + + A R L+A+QGP + +L + + L FM
Sbjct: 120 DADFA-------KLRAGLPDCEVSWWQA--RSLLALQGPEAVEVLAA-IEPAVRDLTFMH 169
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ GIPC ++R+GYTGEDG EISVP ++ + + L D VK GLGARDSL
Sbjct: 170 GGEFTLLGIPCWVSRSGYTGEDGYEISVPDDRAAVLADLLCKDPRVKPVGLGARDSL 226
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSG 69
PG R GG+PGA ++ QI++G RKR G G P+R E++ ++VG +TSG
Sbjct: 260 PGGER--AGGYPGADVVGEQIENGAPRKRVGLAIDGRAPVRAHTELY-LGAEKVGEVTSG 316
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+L IAMGY++ A++ VG +L +VR K V V+V MPFVK +Y
Sbjct: 317 GFGATLNAPIAMGYVQAAHAAVGTKLVAKVRGKDVAVEVVAMPFVKKDY 365
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+ R L+A+QGP + +L + + L FM T+ GIPC ++R+GYTGEDG EISV
Sbjct: 139 QARSLLALQGPEAVEVLAA-IEPAVRDLTFMHGGEFTLLGIPCWVSRSGYTGEDGYEISV 197
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + + L D VK GLGARDSL
Sbjct: 198 PDDRAAVLADLLCKDPRVKPVGLGARDSL 226
>gi|340517489|gb|EGR47733.1| predicted protein [Trichoderma reesei QM6a]
Length = 433
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 164/317 (51%), Gaps = 37/317 (11%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS A ++TPLYD H+++G KMVPFAG+ MPVQY ++S+ SH TR S+FDVSHM+Q
Sbjct: 35 SSGEALKKTPLYDFHVANGAKMVPFAGYHMPVQYSSLSLADSHHFTRKHASLFDVSHMVQ 94
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSN 309
+ G +LE + + + P G L+ F GGI DD IVT+ ED ++V+N
Sbjct: 95 HIFKGPAAAAFLEKVTPSSWSSVAPMSGKLTTFLWPGTGGIVDDTIVTRIGEDEYYVVTN 154
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLS 367
+ D + + G D+ Q+ + GL+A+QGP S+ IL TD++L
Sbjct: 155 GACLDKDTKYI---DEELGKFGGDV--QWTRLDGSGLVALQGPQSAEILSEVLATDVNLK 209
Query: 368 SLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLS 415
YF + + P ++R GYTGEDG EIS G E VE+L+
Sbjct: 210 EFYFGNTVQAQLKLADGSTTHPVLISRGGYTGEDGFEISFNGKLYPAAESTVKAVESLVK 269
Query: 416 D---EDVKLAGLGARDSLSGDITL----------NTPVPHG-SLKLSNDRFKS---LGKD 458
E +++AGLGARDSL + + TPV G S + +R K+ G +
Sbjct: 270 AAGPERLQMAGLGARDSLRLEAGMCLYGHDLDDTTTPVEAGLSWIIPPERRKAGGFHGAE 329
Query: 459 IHLQFLSPEERGLIAVQ 475
+ L L+P+ +G V+
Sbjct: 330 VILPQLTPKSKGGAGVE 346
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 15 RRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITS 68
RR+ GGF GA +I Q+ +GV R+R GF G P R G EI + + ++G ITS
Sbjct: 319 RRKAGGFHGAEVILPQLTPKSKGGAGVERRRVGFVVQGAPAREGAEIQSKDGDKIGVITS 378
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
G PSP+L KNIAMGYI+ K G E+ V VR ++ VTKMPF + Y+ P
Sbjct: 379 GVPSPTLGKNIAMGYIKDGLHKAGTEVDVVVRGRKRPAVVTKMPFTPAKYWKAP 432
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCT 503
K ++ G D+ Q+ + GL+A+QGP S+ IL TD++L YF +
Sbjct: 163 KYIDEELGKFGGDV--QWTRLDGSGLVALQGPQSAEILSEVLATDVNLKEFYFGNTVQAQ 220
Query: 504 I------AGIPCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLSD---EDVKLAG 548
+ P ++R GYTGEDG EIS G E VE+L+ E +++AG
Sbjct: 221 LKLADGSTTHPVLISRGGYTGEDGFEISFNGKLYPAAESTVKAVESLVKAAGPERLQMAG 280
Query: 549 LGARDSL 555
LGARDSL
Sbjct: 281 LGARDSL 287
>gi|207346849|gb|EDZ73217.1| YDR019Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 400
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 138/244 (56%), Gaps = 11/244 (4%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S ++T L+DLH+S GG MVP+AG+SMPV Y + SH TR+ +FDVSHMLQ+ +
Sbjct: 14 STLKKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKL 73
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS-LFLVSNASR 312
+G H ++L+ + D + L G GTLS+ N QGG+ DD I+TK +D+ ++V+NA
Sbjct: 74 SGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNAGC 133
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLS 367
+ D + D ++ G + Q+ E R L+A+QGP + +L+ DL
Sbjct: 134 AERDTEFF---HDELQN-GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLK 189
Query: 368 SLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
L+F + G + R GYTGEDG EIS+ E+ E LL++ +K GL A
Sbjct: 190 ELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLANPLMKPIGLAA 249
Query: 427 RDSL 430
RDSL
Sbjct: 250 RDSL 253
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 21 FPGASIIQSQIKSGV-SRKRTGFT--STGVPIRPGYEIFNAN-DQRVGAITSGCPSPSLK 76
F G + I Q+ + S+ R GF G R G +IF + + VG +TSG SP+L
Sbjct: 295 FNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLN 354
Query: 77 K-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
NI Y++ Y K G +L V+VR+K +++ KMP V ++YY
Sbjct: 355 NINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYY 398
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPCTIA-GIPC 509
G + Q+ E R L+A+QGP + +L+ DL L+F + G
Sbjct: 148 GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLKELFFGQRHEFALKDGSLV 207
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R GYTGEDG EIS+ E+ E LL++ +K GL ARDSL
Sbjct: 208 QIARGGYTGEDGFEISIANEKAVEFAEQLLANPLMKPIGLAARDSL 253
>gi|257796256|ref|NP_001158183.1| aminomethyltransferase, mitochondrial isoform 3 precursor [Homo
sapiens]
gi|194373753|dbj|BAG56972.1| unnamed protein product [Homo sapiens]
Length = 347
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 119/185 (64%), Gaps = 10/185 (5%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
A + D+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL
Sbjct: 90 AGCWEKDLALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDL 143
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
L FMTS + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL
Sbjct: 144 RKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLA 203
Query: 426 ARDSL 430
ARDSL
Sbjct: 204 ARDSL 208
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 345
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 208
>gi|335037214|ref|ZP_08530525.1| glycine cleavage system aminomethyltransferase T [Agrobacterium sp.
ATCC 31749]
gi|333791370|gb|EGL62756.1| glycine cleavage system aminomethyltransferase T [Agrobacterium sp.
ATCC 31749]
Length = 379
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 150/279 (53%), Gaps = 25/279 (8%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A + TPL+ LH+S G +MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q ++
Sbjct: 5 AALKTTPLHSLHISLGARMVPFAGYDMPVQYPA-GVLKEHLQTRTSAGLFDVSHMGQVIL 63
Query: 254 TGK--HREEW---LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
K + E+ LE++ D+ L G+ FT++ G I DDL++T D LF+V
Sbjct: 64 KAKSGNNEDAARALETLVPVDILGLKEGRQRYGFFTDDNGHILDDLMITNR-GDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NAS + D+ M A L + L ++R LIA+QGP + +L +S
Sbjct: 123 NASCKDADVAHMKA------HLSDACEITLL--DDRALIALQGPRAEAVLAELW-AGVSE 173
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM + + +PC ++R+GY+GEDG EISVP ++ I +ALL D + GLGARD
Sbjct: 174 MKFMDVQEVPLHDVPCIVSRSGYSGEDGFEISVPADKAEEIAKALLEHPDCEAIGLGARD 233
Query: 429 SL---------SGDITLNTPVPHGSLKLSNDRFKSLGKD 458
SL DI T SL+ + + + G D
Sbjct: 234 SLRLEAGLCLYGNDIDTTTSPIEASLEWAIQKARRAGGD 272
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R LIA+QGP + +L +S + FM + + +PC ++R+GY+GEDG EISV
Sbjct: 148 DDRALIALQGPRAEAVLAELW-AGVSEMKFMDVQEVPLHDVPCIVSRSGYSGEDGFEISV 206
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ I +ALL D + GLGARDSL
Sbjct: 207 PADKAEEIAKALLEHPDCEAIGLGARDSL 235
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPSL 75
GGFPGA I ++K G SR+R G G P+R ++F + +G +TSG PS+
Sbjct: 275 GGFPGAERILGELKDGTSRRRVGLKPEGKAPVRGHSKLFADAEGVTEIGEVTSGGFGPSV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ +Y+ G ++ VR K + V V +PF+K Y
Sbjct: 335 EGPVAMGYVPVSYAAPGTAIFAEVRGKYLPVTVAALPFIKPTY 377
>gi|452751088|ref|ZP_21950834.1| Aminomethyltransferase [alpha proteobacterium JLT2015]
gi|451961238|gb|EMD83648.1| Aminomethyltransferase [alpha proteobacterium JLT2015]
Length = 368
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 132/231 (57%), Gaps = 12/231 (5%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE 259
PL+ LH GKMVPFAGF MP+QY I A H RS+ +FDVSHM Q V+GK
Sbjct: 13 PLHALHKELKGKMVPFAGFMMPLQY--EGIMAEHEWVRSRAGLFDVSHMGQLEVSGKDAA 70
Query: 260 EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDL 319
LE++ D L G+ SL ++ GGI DDL+VT+ D +LV NA+ +K D+
Sbjct: 71 AALEALMPGDFIGLKEGRLRYSLLLDDNGGIIDDLMVTRR-ADHFYLVVNAATKKNDIAH 129
Query: 320 MVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 379
+ R H+ E+ L+A+QGP ++ ++ R +++++ FM P I
Sbjct: 130 LT---RRLPG-----HISVREREDLALLALQGPKAADVVAR-LGAEVNTMTFMRGNPIRI 180
Query: 380 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP ++ + LLSD DVK GLGARDSL
Sbjct: 181 KGSEIWMSRSGYTGEDGFEISVPVKKAEKLARLLLSDPDVKPIGLGARDSL 231
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 460 HLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGE 519
H+ E+ L+A+QGP ++ ++ R +++++ FM P I G ++R+GYTGE
Sbjct: 137 HISVREREDLALLALQGPKAADVVAR-LGAEVNTMTFMRGNPIRIKGSEIWMSRSGYTGE 195
Query: 520 DGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
DG EISVP ++ + LLSD DVK GLGARDSL
Sbjct: 196 DGFEISVPVKKAEKLARLLLSDPDVKPIGLGARDSL 231
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRR+ GGFPG I QI +G +R G G +P R G +F+ D + G +TSG
Sbjct: 261 KRRKMEGGFPGDERIGRQIHNGTKVRRVGLKLDGKLPAREGASVFS-GDAKTGVVTSGGF 319
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+P++ IAM Y+ A + G L V VR KR+ +V MPFV Y
Sbjct: 320 APTVGAPIAMAYVADADAADGTALEVEVRGKRLAARVVPMPFVPHRY 366
>gi|121605577|ref|YP_982906.1| glycine cleavage system T protein [Polaromonas naphthalenivorans
CJ2]
gi|120594546|gb|ABM37985.1| glycine cleavage system T protein [Polaromonas naphthalenivorans
CJ2]
Length = 384
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 139/243 (57%), Gaps = 13/243 (5%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++P+ +TPL DLH+ G +MVPFAG+SMPVQY A + A HLHTRS +FDVSHM Q
Sbjct: 7 ATPAPLLKTPLNDLHVELGARMVPFAGYSMPVQYPA-GLMAEHLHTRSAAGLFDVSHMGQ 65
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS---LFLV 307
+ G ES+ DV +L PG+ L N++GGI DDL+ + +F++
Sbjct: 66 LRLVGPDAAAAFESLMPVDVIDLAPGRQRYGLLLNDEGGIIDDLMFFNRDHANGGDIFVI 125
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLS 367
N + + D+ + A +G+ + + E L+A+QGP + T LQR +
Sbjct: 126 VNGACKAGDIAHIQA------KIGQ--RCEVIPMPEMALLALQGPQAVTALQRLAP-GVE 176
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
L FMT T+AG C LTR+GYTGEDG EISV Q + ALL+ +VK GLGAR
Sbjct: 177 QLVFMTGGRFTVAGCDCFLTRSGYTGEDGFEISVDASQADALARALLAQPEVKPVGLGAR 236
Query: 428 DSL 430
+SL
Sbjct: 237 NSL 239
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIK--SGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA I +Q+ + ++RKR G + +P+R + + +G +TSG P+
Sbjct: 278 AGGFPGADKILAQLDNPASLTRKRVGLKALERIPVRDHTALHGTDGTPIGEVTSGLLGPT 337
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ + +AMGY++P ++ +G + VR K V ++VT MPFV + Y+
Sbjct: 338 INQPVAMGYVQPEFAAIGTRVNAMVRGKPVPMEVTAMPFVPTRYH 382
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E L+A+QGP + T LQR + L FMT T+AG C LTR+GYTGEDG EISV
Sbjct: 153 EMALLALQGPQAVTALQRLAP-GVEQLVFMTGGRFTVAGCDCFLTRSGYTGEDGFEISVD 211
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
Q + ALL+ +VK GLGAR+SL
Sbjct: 212 ASQADALARALLAQPEVKPVGLGARNSL 239
>gi|50286351|ref|XP_445604.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524909|emb|CAG58515.1| unnamed protein product [Candida glabrata]
Length = 391
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 132/244 (54%), Gaps = 12/244 (4%)
Query: 192 SPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
+ +A ++T L+DLH+S GG MV FAG+SMPV Y + SHL TR +FDVSHMLQ+
Sbjct: 9 NSTALKKTALHDLHVSLGGTMVEFAGYSMPVLYKGQTHIESHLWTRQNAGLFDVSHMLQS 68
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + L S+ D L G G+LS+ NE GG+ DD I+TK ++ ++V+NA
Sbjct: 69 RLTGAEATKLLHSVTPTDFANLPQGTGSLSVLLNEHGGVVDDTIITKEQDNQYYIVTNAG 128
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT--DLDLSSL 369
D + + + D + R L+A+QGP + +L+R D L+ L
Sbjct: 129 CVDRDTEFLKGEVSKL-----DCSWDIIQG--RSLLALQGPKAQQVLERLVTRDSKLNEL 181
Query: 370 YFMTSRPCTIAGIPCT---LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
YF + T+ T + R GYTGEDG EISV + + LL +E K GL A
Sbjct: 182 YFGERKEFTLDDATATRIGVARGGYTGEDGFEISVENGKANEFAQKLLDNELTKPIGLAA 241
Query: 427 RDSL 430
RDSL
Sbjct: 242 RDSL 245
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 469 RGLIAVQGPLSSTILQRHT--DLDLSSLYFMTSRPCTIAGIPCT---LTRAGYTGEDGVE 523
R L+A+QGP + +L+R D L+ LYF + T+ T + R GYTGEDG E
Sbjct: 154 RSLLALQGPKAQQVLERLVTRDSKLNELYFGERKEFTLDDATATRIGVARGGYTGEDGFE 213
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
ISV + + LL +E K GL ARDSL
Sbjct: 214 ISVENGKANEFAQKLLDNELTKPIGLAARDSL 245
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 13 KRRRETGG---FPGASIIQSQIKSG---VSRKRTGFTSTGVPIRPGYEIF-NANDQRVGA 65
K RR+ G F G S I Q+K+ + R + G RPG +IF + ++G
Sbjct: 275 KSRRDAGSEDQFNGYSKIIDQLKNKTHEIIRIAYKYKGKGPAARPGAKIFLEDGETQIGE 334
Query: 66 ITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+TSG +PSL NI GY++ A++K G + ++VR+K ++ KMP V+++Y+
Sbjct: 335 VTSGSAAPSLNNINIGQGYVKRAHNKKGKTVLIQVRNKFYPAELAKMPLVQTHYH 389
>gi|421849650|ref|ZP_16282627.1| glycine cleavage system T protein [Acetobacter pasteurianus NBRC
101655]
gi|371459594|dbj|GAB27830.1| glycine cleavage system T protein [Acetobacter pasteurianus NBRC
101655]
Length = 365
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 134/232 (57%), Gaps = 16/232 (6%)
Query: 204 LHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREE--- 260
+H GGKMVPFAG++MP+QY A I A H H R V +FDVSHM Q ++ + +
Sbjct: 1 MHEESGGKMVPFAGYAMPLQY-ADGIMAEHRHVREHVGLFDVSHMGQVLLRPRSGDVDDA 59
Query: 261 --WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE + AD+ L G+ + FTN +GGI DDL+V + LED L LV NA+ ++ D++
Sbjct: 60 ALALEKLVPADIAALKHGRQRYTQFTNAKGGILDDLMVAR-LEDGLLLVVNAACKEADLE 118
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
L+ Q + + LQ E+R L+A+QGP + L D D+ + FM R
Sbjct: 119 LL---QSELVAECV-VELQ----EDRALLALQGPEAEQTLAVFAD-DVRKMVFMDVRTLD 169
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISV + + LL +VKL GLGARDSL
Sbjct: 170 VDGARCVISRSGYTGEDGFEISVSAKDADRVARKLLEQPNVKLIGLGARDSL 221
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + L D D+ + FM R + G C ++R+GYTGEDG EISV
Sbjct: 134 EDRALLALQGPEAEQTLAVFAD-DVRKMVFMDVRTLDVDGARCVISRSGYTGEDGFEISV 192
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL +VKL GLGARDSL
Sbjct: 193 SAKDADRVARKLLEQPNVKLIGLGARDSL 221
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA II Q+++GVSR+R G G P+R ++ + +G +TSG P+
Sbjct: 260 AGGFPGADIILGQLENGVSRRRVGLRPEGRAPVRHDAPLYADAEFATHIGKVTSGAFGPT 319
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ S+ G ++ +R + V ++ +PFV +++
Sbjct: 320 VGGPVAMGYVATNDSQTGHTVFAELRGRSVPSVISALPFVPAHF 363
>gi|421853432|ref|ZP_16286106.1| glycine cleavage system T protein [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478367|dbj|GAB31309.1| glycine cleavage system T protein [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 365
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 134/232 (57%), Gaps = 16/232 (6%)
Query: 204 LHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREE--- 260
+H GGKMVPFAG++MP+QY A I A H H R V +FDVSHM Q ++ + +
Sbjct: 1 MHEESGGKMVPFAGYAMPLQY-ADGIMAEHRHVREHVGLFDVSHMGQVLLRPRSGDVDDA 59
Query: 261 --WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE + AD+ L G+ + FTN +GGI DDL+V + LED L LV NA+ ++ D++
Sbjct: 60 ALALEKLVPADIAALKHGRQRYTQFTNAKGGILDDLMVAR-LEDGLLLVVNAACKEADLE 118
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
L+ Q + + LQ E+R L+A+QGP + L D D+ + FM R
Sbjct: 119 LL---QSELVAECV-VELQ----EDRALLALQGPEAEQALAVFAD-DVRKMVFMDVRTLD 169
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISV + + LL +VKL GLGARDSL
Sbjct: 170 VDGARCVISRSGYTGEDGFEISVSAKDADRVARKLLEQPNVKLIGLGARDSL 221
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + L D D+ + FM R + G C ++R+GYTGEDG EISV
Sbjct: 134 EDRALLALQGPEAEQALAVFAD-DVRKMVFMDVRTLDVDGARCVISRSGYTGEDGFEISV 192
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL +VKL GLGARDSL
Sbjct: 193 SAKDADRVARKLLEQPNVKLIGLGARDSL 221
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA II Q+++GVSR+R G G P+R ++ + +G +TSG P+
Sbjct: 260 AGGFPGADIILGQLENGVSRRRVGLRPEGRAPVRHDAPLYADAEFATHIGKVTSGAFGPT 319
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ S+ G ++ +R + V ++ +PFV +++
Sbjct: 320 VGGPVAMGYVATNDSQTGHTVFAELRGRSVPSVISALPFVPAHF 363
>gi|52630863|gb|AAU84891.1| aminomethyltransferase [Eubacterium acidaminophilum]
Length = 371
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 135/244 (55%), Gaps = 10/244 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYDLH+ +GGK++ F G+++P QY I A H R+ +FDVSHM + V GK
Sbjct: 5 KKTALYDLHVKYGGKIIEFCGWALPTQYEGGGINAEHEAVRTAAGMFDVSHMGEVEVKGK 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + D+ L+P + + F GG DDL+V K + LV NA+ VD
Sbjct: 65 EAEKFINYLVPNDITVLEPNQVLYTQFCYPHGGTVDDLLVYKYTNEDYLLVINAAN--VD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
D ++ S G D+ L+ +S E IA+QGP + ILQ+ TD DL+ + +F +
Sbjct: 123 KDYAWIVEN---SKGFDVSLKNISP-EVSEIALQGPNAEKILQKLTDTDLAQVKFFYCKK 178
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSG 432
I G C ++R GYTGEDG EI E + + E L+ D +K AGLG RD+L
Sbjct: 179 DVNIGGASCLISRTGYTGEDGFEIYTSNEDVSAVWEKLMEAGKDLGIKPAGLGCRDTLRF 238
Query: 433 DITL 436
++ L
Sbjct: 239 EVAL 242
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLT 512
S G D+ L+ +SPE IA+QGP + ILQ+ TD DL+ + +F + I G C ++
Sbjct: 132 SKGFDVSLKNISPE-VSEIALQGPNAEKILQKLTDTDLAQVKFFYCKKDVNIGGASCLIS 190
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
R GYTGEDG EI E + + E L+ D +K AGLG RD+L
Sbjct: 191 RTGYTGEDGFEIYTSNEDVSAVWEKLMEAGKDLGIKPAGLGCRDTL 236
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G ++ Q G+ RK G G I R E+++ D++VG +T+G SPS K +
Sbjct: 272 FIGKEALKKQKAEGLKRKLVGLELKGKGIARHECEVYSG-DKKVGFVTTGYQSPSTGKVV 330
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
A+ ++ Y+++G +L +++R RV +V F +Y
Sbjct: 331 ALAIVDTEYTEMGTQLEIQIRKNRVPAEVVAKKFYNKSY 369
>gi|769682|gb|AAB05000.1| glycine cleavage T protein [Saccharomyces cerevisiae]
Length = 400
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 137/244 (56%), Gaps = 11/244 (4%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S ++T L+DLH+S GG MVP+AG+SMPV Y + SH TR+ +FDVSHMLQ+ +
Sbjct: 14 STLKKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKL 73
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK-TLEDSLFLVSNASR 312
+G H ++L+ + D + L G GTLS+ N QGG+ DD I+TK E+ ++V+NA
Sbjct: 74 SGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDENEFYIVTNAGC 133
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLS 367
+ D + D ++ G + Q+ E R L+A+QGP + +L+ DL
Sbjct: 134 AERDTEFF---HDELQN-GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLK 189
Query: 368 SLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
L+F + G + R GYTGEDG EIS+ E+ E LL++ +K GL A
Sbjct: 190 ELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAA 249
Query: 427 RDSL 430
RDSL
Sbjct: 250 RDSL 253
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 38/213 (17%)
Query: 349 VQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTH 408
+ GP S LQR T D ++L P + L G +D + E +
Sbjct: 73 LSGPHSVKFLQRVTPTDFNAL------PVGSGTLSVLLNPQGGVVDDTIITKENDENEFY 126
Query: 409 IVEALLSDEDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEE 468
IV AG RD+ + +D ++ G + Q+ E
Sbjct: 127 IVTN---------AGCAERDT----------------EFFHDELQN-GSTLDCQWKIIEG 160
Query: 469 RGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPCTIA-GIPCTLTRAGYTGEDGV 522
R L+A+QGP + +L+ DL L+F + G + R GYTGEDG
Sbjct: 161 RSLLALQGPKAKDVLEPLLSKTAPGKDLKELFFGQRHEFALKDGSLVQIARGGYTGEDGF 220
Query: 523 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EIS+ E+ E LL++ +K GL ARDSL
Sbjct: 221 EISIANEKAVEFAEQLLANPVMKPIGLAARDSL 253
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 21 FPGASIIQSQIKSGV-SRKRTGFT--STGVPIRPGYEIFNAN-DQRVGAITSGCPSPSLK 76
F G + I Q+ + S+ R GF G R G +IF + + VG +TSG SP+L
Sbjct: 295 FNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLN 354
Query: 77 K-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
NI Y++ Y K G +L V+VR+K +++ KMP V ++YY
Sbjct: 355 NINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYY 398
>gi|354476381|ref|XP_003500403.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 3
[Cricetulus griseus]
Length = 347
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 115/183 (62%), Gaps = 4/183 (2%)
Query: 249 LQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
+QT + G R + +ESI V D+ EL P +G LSLFTNE GGI DDLIVT T E L++VS
Sbjct: 29 VQTKIFGHDRVKLMESIVVGDIAELKPNQGILSLFTNEAGGILDDLIVTNTSEGHLYVVS 88
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA D+ LM F++ G D+ L+ + + L+A+QGP ++ +LQ DL
Sbjct: 89 NAGCWDKDLALMQDKVKEFQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRK 145
Query: 369 LYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
+ FMTS + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL AR
Sbjct: 146 MPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAIAAVHLATALLKNPEVKLAGLAAR 205
Query: 428 DSL 430
DSL
Sbjct: 206 DSL 208
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 70/109 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA II Q+K V ++R G G P+R I + +GA+TSGCP
Sbjct: 237 GKRRRTAMDFPGAKIIVPQLKGEVQKRRVGLVCEGAPVRAHSPILSTEGTVIGAVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYYT 345
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ F++ G D+ L+ + + L+A+QGP ++ +LQ DL + FMTS
Sbjct: 97 LALMQDKVKEFQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRKMPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPAIAAVHLATALLKNPEVKLAGLAARDSL 208
>gi|420240134|ref|ZP_14744392.1| glycine cleavage system T protein [Rhizobium sp. CF080]
gi|398077508|gb|EJL68484.1| glycine cleavage system T protein [Rhizobium sp. CF080]
Length = 378
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 135/240 (56%), Gaps = 23/240 (9%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV---TG 255
TPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q V+ +G
Sbjct: 10 TPLHALHLSLGARMVPFAGYDMPVQYPA-GVLKEHLHTRAAAGLFDVSHMGQVVIRAKSG 68
Query: 256 KHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ + L E++ D+ L PG+ FT++ GGI DDL++T D LF+V NAS +
Sbjct: 69 TYEDAALALETLVPVDILGLKPGRQRYGFFTDDNGGILDDLMITNR-GDHLFVVVNASCK 127
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAV---QGPLSSTILQRHTDLDLSSLY 370
+ D+ M A HL E A+ QGP + +L D+ +
Sbjct: 128 EADLAHMQA------------HLSGCDVELLDDRALLALQGPRAEEVLAALWP-DVVDMK 174
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM R ++ PC ++R+GY+GEDG EISVP +Q I +ALL D + GLGARDSL
Sbjct: 175 FMDVRDASLHDAPCIISRSGYSGEDGFEISVPADQAEQIAKALLEDLHCQPIGLGARDSL 234
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 475 QGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHI 534
QGP + +L D+ + FM R ++ PC ++R+GY+GEDG EISVP +Q I
Sbjct: 155 QGPRAEEVLAALWP-DVVDMKFMDVRDASLHDAPCIISRSGYSGEDGFEISVPADQAEQI 213
Query: 535 VEALLSDEDVKLAGLGARDSL 555
+ALL D + GLGARDSL
Sbjct: 214 AKALLEDLHCQPIGLGARDSL 234
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSLKK 77
FPGA I ++ +G SR+R G G P+R +++ + R +G +TSG PS++
Sbjct: 276 FPGADRILGELANGTSRRRIGLKPEGKAPVRAHAKLYADAEGRTELGEVTSGTFGPSVEG 335
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ +++ G +++ VR K + + V+ +PF+ Y
Sbjct: 336 PVAMGYVPTRFAEPGCQIFAEVRGKYLPLTVSALPFITPTY 376
>gi|358388885|gb|EHK26478.1| hypothetical protein TRIVIDRAFT_215296 [Trichoderma virens Gv29-8]
Length = 436
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 165/320 (51%), Gaps = 37/320 (11%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S SS ++TPLYD H+++G KMVPFAG+ MPVQY ++S+ SH TR+ S+FDVSH
Sbjct: 36 SNASSGEPLKKTPLYDFHVANGAKMVPFAGYHMPVQYSSLSLAESHHFTRNHASLFDVSH 95
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFL 306
M+Q + G +LE + + + P G L+ F GGI DD IVT+ ED ++
Sbjct: 96 MVQHIFKGPAAAAFLEKVTPSSWSNVAPMSGKLTTFLWPGTGGIVDDTIVTRIGEDEFYV 155
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDL 364
V+N + + D + + G D+ L GL+A+QGP ++ IL TD+
Sbjct: 156 VTNGACLEKDTKYI---DEELGKFGGDVKWTRLDGS--GLVALQGPQAAEILSEVLVTDV 210
Query: 365 DLSSLYFMTSRPCTIAGI------PCTLTRAGYTGEDGVEISVPG------EQCTHIVEA 412
+L YF + + P ++R GYTGEDG EIS G E VE+
Sbjct: 211 NLKEFYFGNTIQAELKLADGSKTHPVLISRGGYTGEDGFEISFNGKLYPALESTVKAVES 270
Query: 413 LLSD---EDVKLAGLGARDSLSGDITL----------NTPVPHG-SLKLSNDRFKS---L 455
L+ E +++AGLGARDSL + + TPV G S +S +R K+
Sbjct: 271 LIKTAGPERLQMAGLGARDSLRLEAGMCLYGHDLDDTTTPVEAGLSWIISPERRKAGGFH 330
Query: 456 GKDIHLQFLSPEERGLIAVQ 475
G ++ L L+P+ +G V+
Sbjct: 331 GAEVILPQLTPKSKGGSGVE 350
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 15 RRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITS 68
RR+ GGF GA +I Q+ SGV R+R GF G P R G EI + Q +G ITS
Sbjct: 323 RRKAGGFHGAEVILPQLTPKSKGGSGVERRRVGFVVQGAPAREGAEI-QKDGQTIGTITS 381
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
G PSP+L KNIAMGYI+ K G E+ V VR ++ VTKMPF + Y+ P
Sbjct: 382 GVPSPTLGKNIAMGYIKDGQHKAGTEVDVVVRGRKRQAVVTKMPFTPAKYWKAP 435
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 19/127 (14%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRH--TDLDLSSLYFMTSRPCT 503
K ++ G D+ L + GL+A+QGP ++ IL TD++L YF +
Sbjct: 167 KYIDEELGKFGGDVKWTRL--DGSGLVALQGPQAAEILSEVLVTDVNLKEFYFGNTIQAE 224
Query: 504 IAGI------PCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLSD---EDVKLAG 548
+ P ++R GYTGEDG EIS G E VE+L+ E +++AG
Sbjct: 225 LKLADGSKTHPVLISRGGYTGEDGFEISFNGKLYPALESTVKAVESLIKTAGPERLQMAG 284
Query: 549 LGARDSL 555
LGARDSL
Sbjct: 285 LGARDSL 291
>gi|150396403|ref|YP_001326870.1| glycine cleavage system aminomethyltransferase T [Sinorhizobium
medicae WSM419]
gi|150027918|gb|ABR60035.1| glycine cleavage system T protein [Sinorhizobium medicae WSM419]
Length = 379
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 133/239 (55%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+ TPL+ LHLS G +MVPFAG+ MPVQY + HLHTR+ VFDVSHM Q +V
Sbjct: 8 KHTPLHALHLSRGARMVPFAGYDMPVQY-PEGVLKEHLHTRTAAGVFDVSHMGQILVRPK 66
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+GK + L E + DV L G+ LFTN GGI DDL++ D LFLV NA+
Sbjct: 67 SGKIEDAALALEKLVPVDVLSLAEGRQRYGLFTNATGGILDDLMIVNR-GDHLFLVVNAA 125
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + LG + L+ +R LIA+QGP + +L D++S+ F
Sbjct: 126 CKDADFAHLK------NGLGSLCDVTMLT--DRALIALQGPRAGAVLCELW-ADVASMRF 176
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + + C ++R+GYTGEDG EIS+P E + + LL DV GLGARDSL
Sbjct: 177 MDVAEADLHDVSCIISRSGYTGEDGFEISIPTEAAVDVTQRLLEHPDVLPIGLGARDSL 235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPS 74
GGFPGA I ++ GVSR+R G G P+R G +F + G +TSG PS
Sbjct: 274 AGGFPGADRILAEFTHGVSRRRVGLKPEGRAPVRGGVRLFADAEGNTAAGTVTSGGFGPS 333
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ IAMGY++ +++ G L+ VR K + V V+ +PF+K Y
Sbjct: 334 VDGPIAMGYVDAEHAETGTRLFAEVRGKFLPVAVSALPFIKQTY 377
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L D++S+ FM + + C ++R+GYTGEDG EIS+P
Sbjct: 149 DRALIALQGPRAGAVLCELW-ADVASMRFMDVAEADLHDVSCIISRSGYTGEDGFEISIP 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E + + LL DV GLGARDSL
Sbjct: 208 TEAAVDVTQRLLEHPDVLPIGLGARDSL 235
>gi|349577089|dbj|GAA22258.1| K7_Gcv1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 400
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 138/244 (56%), Gaps = 11/244 (4%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S ++T L+DLH+S GG MVP+AG+SMPV Y + SH TR+ +FDVSHMLQ+ +
Sbjct: 14 STLKKTALHDLHVSLGGIMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKL 73
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS-LFLVSNASR 312
+G H ++L+ + D + L G GTLS+ N QGG+ DD I+TK +D+ ++V+NA
Sbjct: 74 SGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNAGC 133
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLS 367
+ D + D ++ G + Q+ E R L+A+QGP + +L+ DL
Sbjct: 134 AERDTEFF---HDELQN-GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLK 189
Query: 368 SLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
L+F + G + R GYTGEDG EIS+ E+ E LL++ +K GL A
Sbjct: 190 ELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAA 249
Query: 427 RDSL 430
RDSL
Sbjct: 250 RDSL 253
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPCTIA-GIPC 509
G + Q+ E R L+A+QGP + +L+ DL L+F + G
Sbjct: 148 GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLKELFFGQRHEFALKDGSLV 207
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R GYTGEDG EIS+ E+ E LL++ +K GL ARDSL
Sbjct: 208 QIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAARDSL 253
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 21 FPGASIIQSQIKSGV-SRKRTGFT--STGVPIRPGYEIFNAN-DQRVGAITSGCPSPSLK 76
F G + I Q+ + S+ R GF G R G +IF + + VG +TSG SP+L
Sbjct: 295 FNGYAKIMDQLNNKTYSKIRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLN 354
Query: 77 K-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
NI Y++ Y K G +L V+VR+K +++ KMP V ++YY
Sbjct: 355 NINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYY 398
>gi|227822099|ref|YP_002826070.1| glycine cleavage system T protein [Sinorhizobium fredii NGR234]
gi|227341099|gb|ACP25317.1| glycine cleavage system T protein [Sinorhizobium fredii NGR234]
Length = 474
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 134/237 (56%), Gaps = 16/237 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV---TG 255
TPL+ LHLS GG+MVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q ++ +G
Sbjct: 105 TPLHALHLSLGGRMVPFAGYEMPVQY-ADGVLKEHLHTRAAAGLFDVSHMGQIIIRPKSG 163
Query: 256 KHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ + L E + DV L G+ LFTN GGI DDL++ D LFLV NA+ +
Sbjct: 164 RIADAALALERLVPVDVLGLAEGRQRYGLFTNPDGGILDDLMIANR-GDHLFLVVNAACK 222
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D + + LG + L ++R LIA+QGP + +L D++S+ FM
Sbjct: 223 DADFAHLK------EGLGDSCDVTLL--DDRALIALQGPHAEAVLCELW-ADVASMRFMD 273
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EIS+P + + LL DV GLGARDSL
Sbjct: 274 VAEADLHDVTCIISRSGYTGEDGFEISIPTASAVDVTQRLLEHPDVLAIGLGARDSL 330
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPS 74
GGFPGA I ++ G SR+R G G P+R G +F D V G++TSG PS
Sbjct: 369 AGGFPGADRILAEFAGGTSRRRVGLRPEGRAPVRGGATLFADADGTVPIGSVTSGGFGPS 428
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+E A++ G +++ VR K + V V+ +PFVK Y
Sbjct: 429 IDGPVAMGYVETAHAGNGTQIFAEVRGKYLPVTVSALPFVKQTY 472
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
+ LG + L ++R LIA+QGP + +L D++S+ FM + + C ++
Sbjct: 231 EGLGDSCDVTLL--DDRALIALQGPHAEAVLCELW-ADVASMRFMDVAEADLHDVTCIIS 287
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EIS+P + + LL DV GLGARDSL
Sbjct: 288 RSGYTGEDGFEISIPTASAVDVTQRLLEHPDVLAIGLGARDSL 330
>gi|408785237|ref|ZP_11196984.1| glycine cleavage system aminomethyltransferase T [Rhizobium lupini
HPC(L)]
gi|408488831|gb|EKJ97138.1| glycine cleavage system aminomethyltransferase T [Rhizobium lupini
HPC(L)]
Length = 379
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A + TPL+ LHLS G +MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q +V
Sbjct: 5 AALKTTPLHSLHLSLGARMVPFAGYDMPVQYPA-GVLKEHLQTRTSAGLFDVSHMGQVIV 63
Query: 254 TGK-----HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
K + LE + D+ L G+ FT+++G I DDL++T D LF+V
Sbjct: 64 KAKSGNNADAAQALEKLVPVDILGLKEGRQRYGFFTDDKGCILDDLMITNR-GDHLFVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D+ M A L + L E+R LIA+QGP + +L +S
Sbjct: 123 NAACKDADVAHMKA------HLSDSCEITLL--EDRALIALQGPRAEEVLAELW-TGVSE 173
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM + + + C ++R+GY+GEDG EISVP ++ I ALL D + GLGARD
Sbjct: 174 MKFMDVQEVPLHDVACIVSRSGYSGEDGFEISVPADKAEEIARALLEHPDCEAIGLGARD 233
Query: 429 SL---------SGDITLNTPVPHGSLKLSNDRFKSLGKD 458
SL DI T SL+ + + + G D
Sbjct: 234 SLRLEAGLCLYGNDIDTTTSPIEASLEWAIQKARRAGGD 272
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R LIA+QGP + +L +S + FM + + + C ++R+GY+GEDG EISV
Sbjct: 148 EDRALIALQGPRAEEVLAELW-TGVSEMKFMDVQEVPLHDVACIVSRSGYSGEDGFEISV 206
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ I ALL D + GLGARDSL
Sbjct: 207 PADKAEEIARALLEHPDCEAIGLGARDSL 235
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSL 75
GGFPGA I ++K G SR+R G G P+R ++F + + +G +TSG PS+
Sbjct: 275 GGFPGAERILGELKDGTSRRRVGLKPEGKAPVRGHSKLFADAEGKTEIGEVTSGGFGPSV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ +Y+ G ++ VR K + V V +PF+K Y
Sbjct: 335 EGPVAMGYVPVSYAAPGTAIFAEVRGKYLPVTVAALPFIKPTY 377
>gi|398892358|ref|ZP_10645494.1| glycine cleavage system T protein [Pseudomonas sp. GM55]
gi|398185508|gb|EJM72907.1| glycine cleavage system T protein [Pseudomonas sp. GM55]
Length = 374
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTN GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNATGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R K +G ++ L EER L+A+QGP + ++L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-KHIGDQCTIEPLF-EERALLALQGPAAVSVLARLAP-EVAKMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAEALARALLAEAEVAAIGLGARDSL 231
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GVSRKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVSRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+G++ SG P+L +AMGY++ AY + +W VR K+V + V+KMPFV
Sbjct: 311 EAGDIIGSVCSGGFGPTLGGPLAMGYVDSAYIALDTPVWAIVRGKKVPLLVSKMPFVPQR 370
Query: 118 YY 119
YY
Sbjct: 371 YY 372
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + ++L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVSVLARLAP-EVAKMTFMQFARVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAANAEALARALLAEAEVAAIGLGARDSL 231
>gi|383757451|ref|YP_005436436.1| aminomethyltransferase [Rubrivivax gelatinosus IL144]
gi|381378120|dbj|BAL94937.1| aminomethyltransferase [Rubrivivax gelatinosus IL144]
Length = 375
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 139/239 (58%), Gaps = 18/239 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHLS G +MVPFAG++MPVQY + A H RS ++FDVSHM Q ++G
Sbjct: 6 KTPLHALHLSLGARMVPFAGYAMPVQY-RDGLIAEHRQCRSAAALFDVSHMGQVRLSGAD 64
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK----TLEDSLFLVSNASRR 313
LE++ DV +L G+ + FTNE GG+ DDL++++ T LFLV NA +
Sbjct: 65 AAAALETLVPVDVVDLAVGRQRYAFFTNEHGGLLDDLMISRPAPGTGFGDLFLVVNAGCK 124
Query: 314 KVDMDLMVAAQDRFKSLGKDI--HLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
D+ + L +I + ER L+A+QGP ++ L R + + L F
Sbjct: 125 DADL----------RHLQTNIGHRCTVVGMPERALLALQGPQAADALAR-LNPGVKDLVF 173
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
MT +A PC +TR+GYTGEDG EISVP E+ + ALL+ +VK AGLGARD+L
Sbjct: 174 MTGGVFELADAPCFVTRSGYTGEDGFEISVPAERAEALASALLALPEVKPAGLGARDTL 232
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSG 69
PG R GG+PGA+ ++ + G RKR G VP+R G I +A+ +G +TSG
Sbjct: 266 PGGARE--GGYPGAAAVERHLAGGAMRKRVGLVGLERVPVREGTAIVDAHGHALGRVTSG 323
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+P + + IAM Y+ ++ E++ VR KR+ ++VTKMPF Y+
Sbjct: 324 TLAPGVDRPIAMAYLPQDHAAPEHEVYAEVRGKRLPMRVTKMPFQPHRYH 373
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGP ++ L R + + L FMT +A PC +TR+GYTGEDG EISVP
Sbjct: 146 ERALLALQGPQAADALAR-LNPGVKDLVFMTGGVFELADAPCFVTRSGYTGEDGFEISVP 204
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E+ + ALL+ +VK AGLGARD+L
Sbjct: 205 AERAEALASALLALPEVKPAGLGARDTL 232
>gi|297171566|gb|ADI22563.1| glycine cleavage system T protein (aminomethyltransferase)
[uncultured Rhizobium sp. HF0500_10F10]
Length = 380
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 150/280 (53%), Gaps = 27/280 (9%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A TPL LH++ G +MVPFAG+SMPVQY A + HLHTR+ +FDVSHM Q +
Sbjct: 5 NALHTTPLDALHVALGARMVPFAGYSMPVQYPA-GVMKEHLHTRAAAGLFDVSHMGQVAI 63
Query: 254 TGKHREEW-----LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
K + LE++ DV L G+ ++FT GGI DDL++ D LFLV
Sbjct: 64 RPKSGDLADAALALETLVPVDVAGLKEGRQRYAVFTGSDGGILDDLMIANR-GDHLFLVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ + D+ + A G + + +R L+A+QGP + L + ++
Sbjct: 123 NAACKDQDIAHLRA--------GLEASCEVEPLTDRALLALQGPAAEAALAT-LNPAIAE 173
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R + G C ++R+GYTGEDG EISVP + + +ALL+ E V+ GLGARD
Sbjct: 174 MRFMDVRALDLLGAACIVSRSGYTGEDGYEISVPADAAEKLAKALLALETVEPIGLGARD 233
Query: 429 SL---------SGDI-TLNTPVPHGSLKLSNDRFKSLGKD 458
SL DI T TPV G+L+ S + + G D
Sbjct: 234 SLRLEAGLCLYGNDIDTTTTPV-EGALEWSMQKVRKAGGD 272
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPSL 75
GGFPGA II Q+ G +R+R G G P+R G +F + VG +TSG P+L
Sbjct: 275 GGFPGADIILKQLAEGATRRRVGLLPDGRAPVRGGTSLFAEAEGGAPVGTVTSGGFGPTL 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ + G L+ VR KR+ V VT +PFV Y
Sbjct: 335 EAPVAMGYVPAELAGSGTRLFAEVRGKRLAVTVTPLPFVTPGY 377
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + L + ++ + FM R + G C ++R+GYTGEDG EISVP
Sbjct: 149 DRALLALQGPAAEAALAT-LNPAIAEMRFMDVRALDLLGAACIVSRSGYTGEDGYEISVP 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + +ALL+ E V+ GLGARDSL
Sbjct: 208 ADAAEKLAKALLALETVEPIGLGARDSL 235
>gi|315498576|ref|YP_004087380.1| glycine cleavage system t protein [Asticcacaulis excentricus CB 48]
gi|315416588|gb|ADU13229.1| glycine cleavage system T protein [Asticcacaulis excentricus CB 48]
Length = 370
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 132/236 (55%), Gaps = 11/236 (4%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A + TPL D H++ G +MVPFAG++MPVQY V A H TR++ +FDVSHM Q ++
Sbjct: 5 ALKSTPLEDRHIALGARMVPFAGYNMPVQYEGV--MAEHKWTRAEAGLFDVSHMGQARLS 62
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G LE++ D L PGK SL NE GGI DD +V++ D FLV NA+ +
Sbjct: 63 GMDAVYTLEALTPTDFAALKPGKQKYSLLLNEAGGILDDWMVSRPQTDGFFLVVNAACK- 121
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
D D + A SL D LS +R L+A+QGP +S ++ + +YFM
Sbjct: 122 -DQDFAIIAD----SLKGDTTFNILS--DRALLALQGPRASEVMAQVCPA-ACEMYFMDC 173
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G ++R+GYTGEDG EIS P + + + LL+ VK GLGARDSL
Sbjct: 174 GTFEMMGETAFVSRSGYTGEDGFEISFPAARAAELWDLLLAFPQVKPIGLGARDSL 229
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSGCP 71
K R E G G I ++ + R R G G P R G I N + +G +TSG P
Sbjct: 259 KSRLERGDIRGIERIYAE-RDNPQRTRVGLRVLEGPPARDGARILNIEGEAIGIVTSGVP 317
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SP+L +IAMGY+ S G L + VR K +V +PFV ++Y+ PK
Sbjct: 318 SPTLGYSIAMGYVPATQSAPGTHLKLEVRGKSYACEVVSIPFVPNSYHRKPK 369
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
SL D LS +R L+A+QGP +S ++ + +YFM + G ++R
Sbjct: 131 SLKGDTTFNILS--DRALLALQGPRASEVMAQVCPA-ACEMYFMDCGTFEMMGETAFVSR 187
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EIS P + + + LL+ VK GLGARDSL
Sbjct: 188 SGYTGEDGFEISFPAARAAELWDLLLAFPQVKPIGLGARDSL 229
>gi|297171775|gb|ADI22766.1| glycine cleavage system T protein (aminomethyltransferase)
[uncultured Rhizobium sp. HF0500_29J11]
Length = 380
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 150/280 (53%), Gaps = 27/280 (9%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A TPL LH++ G +MVPFAG+SMPVQY A + HLHTR+ +FDVSHM Q +
Sbjct: 5 NALHTTPLDALHVALGARMVPFAGYSMPVQYSA-GVMKEHLHTRAAAGLFDVSHMGQVAI 63
Query: 254 TGKHREEW-----LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
K + LE++ DV L G+ ++FT GGI DDL++ D LFLV
Sbjct: 64 RPKSGDLADAALALETLVPVDVAGLKEGRQRYAVFTGSDGGILDDLMIANR-GDHLFLVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NA+ ++ D+ + A G D + +R L+A+QGP + L + ++
Sbjct: 123 NAACKEQDIAHLRA--------GLDDTCEVEPLTDRALLALQGPAAEAALAT-LNPAVAE 173
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
+ FM R + G C ++R+GYTGEDG EISVP + + + LL+ E V+ GLGARD
Sbjct: 174 MRFMDVRALDLLGAACIVSRSGYTGEDGYEISVPADAAEKLAKGLLALETVEPIGLGARD 233
Query: 429 SL---------SGDI-TLNTPVPHGSLKLSNDRFKSLGKD 458
SL DI T TPV G+L+ S + + G D
Sbjct: 234 SLRLEAGLCLYGNDIDTTTTPV-EGALEWSMQKVRKAGGD 272
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPSL 75
GGFPGA I+ Q+ G +R+R G G P+R G +F + VG +TSG P+L
Sbjct: 275 GGFPGADIVLKQLAEGATRRRVGLLPEGRAPVRGGTSLFAEAEGGAPVGTVTSGGFGPTL 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ + G L+ VR KR+ V VT +PFV Y
Sbjct: 335 EAPVAMGYVPAELAGSGTRLFAEVRGKRLAVTVTPLPFVTPGY 377
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + L + ++ + FM R + G C ++R+GYTGEDG EISVP
Sbjct: 149 DRALLALQGPAAEAALAT-LNPAVAEMRFMDVRALDLLGAACIVSRSGYTGEDGYEISVP 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + + LL+ E V+ GLGARDSL
Sbjct: 208 ADAAEKLAKGLLALETVEPIGLGARDSL 235
>gi|296415481|ref|XP_002837415.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633286|emb|CAZ81606.1| unnamed protein product [Tuber melanosporum]
Length = 421
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 146/257 (56%), Gaps = 17/257 (6%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
F ++P +TPL+DLH++ G KMVPFAG+SMPV Y S+ SH R K +FDVS
Sbjct: 27 FYSDAAPGTLAKTPLHDLHVAKGAKMVPFAGYSMPVLYSGESVGESHNWVREKAGLFDVS 86
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTN-EQGGIQDDLIVTKTLEDSLF 305
HM+Q +TG +L + +D+ L + TLS+F + GGI DDLI+T + +
Sbjct: 87 HMVQHRLTGPGALPFLHFVTPSDLTRLPQFQSTLSVFLHPTTGGIVDDLIITSHGPEDFY 146
Query: 306 LVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRH---- 361
+V+NA+ + D DL A++ DI + L + GL+A+QGPL+ IL +
Sbjct: 147 IVTNAACK--DKDLAYMARNMRHLSSSDIKHEVLIGQ--GLVALQGPLAKDILTEYLTGL 202
Query: 362 --TDLDLSSLYFMTSRPCTIA--GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--- 414
+ +DLS LYF TS I G + RAGYTGEDG EIS+ + + LL
Sbjct: 203 TGSPVDLSKLYFGTSMFVEIPSLGEKLHVARAGYTGEDGFEISISEKNTETVTMGLLDVG 262
Query: 415 -SDEDVKLAGLGARDSL 430
+ + ++L+GLGARDSL
Sbjct: 263 STGDRIRLSGLGARDSL 279
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 12 GKRRRETGGFPGASIIQSQIKSG--VSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITS 68
GK R G F GA II Q S V R+R GF G P R EI D +G ITS
Sbjct: 308 GKTRAMDGNFLGAEIISRQYDSWSFVPRRRVGFIVEGPPAREDAEIVEKGTDDVIGKITS 367
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
GCPSP+L KNIAMGYI+ + K G E+ ++VR K VTKMPFV++ YY P
Sbjct: 368 GCPSPTLGKNIAMGYIQSGFHKQGTEVGIKVRGKERSGTVTKMPFVETKYYKAP 421
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 12/99 (12%)
Query: 469 RGLIAVQGPLSSTILQRH------TDLDLSSLYFMTSRPCTIA--GIPCTLTRAGYTGED 520
+GL+A+QGPL+ IL + + +DLS LYF TS I G + RAGYTGED
Sbjct: 181 QGLVALQGPLAKDILTEYLTGLTGSPVDLSKLYFGTSMFVEIPSLGEKLHVARAGYTGED 240
Query: 521 GVEISVPGEQCTHIVEALL----SDEDVKLAGLGARDSL 555
G EIS+ + + LL + + ++L+GLGARDSL
Sbjct: 241 GFEISISEKNTETVTMGLLDVGSTGDRIRLSGLGARDSL 279
>gi|357056659|ref|ZP_09117696.1| glycine cleavage system T protein [Clostridium clostridioforme
2_1_49FAA]
gi|355379826|gb|EHG26976.1| glycine cleavage system T protein [Clostridium clostridioforme
2_1_49FAA]
Length = 362
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 140/239 (58%), Gaps = 12/239 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLYD+H+ + GK+VPFAG+ +PVQY + A H+ R + +FDVSHM + +++G
Sbjct: 2 ELKTPLYDMHVKYKGKIVPFAGYLLPVQY-EKGVIAEHMAVREQCGLFDVSHMGEILLSG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ + + D ++ G S NE GG+ DDLIV K ++S F+V NAS +
Sbjct: 61 PDALKNVNMLLTNDYTVMEDGTARYSPMCNEAGGVVDDLIVYKIKDNSYFIVVNASNKDK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD-LSSLYFMTS 374
D M +D D+ L+ +S ++ G +A+QGP + +L++ T+ D + Y+
Sbjct: 121 DYQWM---KDHVSG---DVELEDIS-DQVGQLALQGPKALDVLKKVTEPDGIPDKYYTFK 173
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+ C I GIPC +++ GYTGEDGVEI + G+ + E LL +E + GLGARD+L
Sbjct: 174 KDCRIDGIPCIISKTGYTGEDGVEIYMAGKDAPSLWELLLEAGREEGLIPCGLGARDTL 232
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLD-LSSLYFMTSRPCTIAGIPCTLTRAGY 516
D+ L+ +S ++ G +A+QGP + +L++ T+ D + Y+ + C I GIPC +++ GY
Sbjct: 132 DVELEDIS-DQVGQLALQGPKALDVLKKVTEPDGIPDKYYTFKKDCRIDGIPCIISKTGY 190
Query: 517 TGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
TGEDGVEI + G+ + E LL +E + GLGARD+L
Sbjct: 191 TGEDGVEIYMAGKDAPSLWELLLEAGREEGLIPCGLGARDTL 232
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 30 QIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYS 89
Q K ++RKR G TG I +E A ++++G TSG P L AM ++ AY
Sbjct: 274 QEKGPLTRKRVGLKVTGRGIIREHEPVFAGERQIGTTTSGTHCPYLGYPAAMALVDIAYK 333
Query: 90 KVGVELWVRVRDKRVDVKVTKMPFVK 115
+ G ++ V VR +RV +V K+PF K
Sbjct: 334 EPGTQVEVDVRGRRVGAEVVKLPFYK 359
>gi|84502875|ref|ZP_01000988.1| hypothetical protein OB2597_14831 [Oceanicola batsensis HTCC2597]
gi|84388858|gb|EAQ01728.1| hypothetical protein OB2597_14831 [Oceanicola batsensis HTCC2597]
Length = 370
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 143/272 (52%), Gaps = 23/272 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q PL DLH+ G +MVPFAG+SMPVQY A + HLHTR +FDVSHM Q ++ G+
Sbjct: 5 QSLPLNDLHVELGARMVPFAGYSMPVQYTA-GVMKEHLHTREAAGLFDVSHMGQVLLRGE 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ E++ DV L G+ L T++ GGI DDL+ + D LF V NA+ + D
Sbjct: 64 NPARAFEALMPVDVVGLKEGRQRYGLLTDDTGGILDDLMFSNR-GDHLFTVVNAACKADD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M AA ++ +R L+A+QGP + +L +++ + FM R
Sbjct: 123 IAHMRAAMP---------GVEVEEVTDRALLALQGPRAQAVLAALAP-EVADMRFMDVRT 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL------ 430
+ G C ++R+GYTGEDG EISVP + + ALL D GLGARDSL
Sbjct: 173 VALCGAECWVSRSGYTGEDGYEISVPADSAETLARALLDHPDTLPIGLGARDSLRLEAGL 232
Query: 431 ---SGDI-TLNTPVPHGSLKLSNDRFKSLGKD 458
DI T TPV G L+ + + + G D
Sbjct: 233 CLYGHDIDTTTTPVEAG-LQWAIQKVRRAGGD 263
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + +L +++ + FM R + G C ++R+GYTGEDG EISVP
Sbjct: 140 DRALLALQGPRAQAVLAALAP-EVADMRFMDVRTVALCGAECWVSRSGYTGEDGYEISVP 198
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + ALL D GLGARDSL
Sbjct: 199 ADSAETLARALLDHPDTLPIGLGARDSL 226
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAITSGCPSPS 74
GGFPGA I Q+ G RKR G G P+R G +F A VG ITSG P+
Sbjct: 265 AGGFPGADRILKQLAEGAERKRVGLRPQGRAPMREGVPLFAGEAATDPVGTITSGAFGPT 324
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ + G + +R +R V+V +PF +N+
Sbjct: 325 VQAPVAMGYLPIDLAAQGTIISAELRGRRAPVEVAPLPFTPANF 368
>gi|384490040|gb|EIE81262.1| hypothetical protein RO3G_05967 [Rhizopus delemar RA 99-880]
Length = 213
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 130/219 (59%), Gaps = 40/219 (18%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPFAG+ MPVQY + I+ASHLHTR K S+FDVSHMLQ+ VTGK R ++ E + VAD+H
Sbjct: 1 MVPFAGYYMPVQYDHLGISASHLHTRQKASIFDVSHMLQSRVTGKDRNKFFERLVVADLH 60
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG 331
+L G+GTLSLFTNEQGGI DD I+ + +DSL++V+NA+ D+ + ++ G
Sbjct: 61 QLPIGQGTLSLFTNEQGGIIDDTIIMQQ-QDSLYVVTNAACADKDLAHIRKHLAEYQKKG 119
Query: 332 KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 391
D+ + ++ LIA+QGP ++ +L+ G+
Sbjct: 120 FDVDFDII--QDHSLIALQGPKAAEVLE---------------------GL--------- 147
Query: 392 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+S+P ++ + E LL+ DV+LAGLGARDSL
Sbjct: 148 -------LSIPTDEINTLTEKLLAHPDVELAGLGARDSL 179
>gi|363900298|ref|ZP_09326804.1| glycine cleavage system T protein [Oribacterium sp. ACB1]
gi|395209855|ref|ZP_10398883.1| aminomethyltransferase [Oribacterium sp. ACB8]
gi|361957152|gb|EHL10464.1| glycine cleavage system T protein [Oribacterium sp. ACB1]
gi|394704840|gb|EJF12372.1| aminomethyltransferase [Oribacterium sp. ACB8]
Length = 363
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 138/245 (56%), Gaps = 11/245 (4%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E RT LYD H+ GGKMVPFAG+ +PVQY + HL R++ +FDVSHM + + G
Sbjct: 2 ELRTALYDAHVKAGGKMVPFAGYCLPVQYEPTGVIKEHLAVRNQAGLFDVSHMGEILCQG 61
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
K LE + + G+ SL NE+GG+ DDLIV K ++ F+V NA+ ++
Sbjct: 62 KDALANLEKLLTNRFENMVDGQARYSLMCNEKGGVVDDLIVYKRKDNDYFIVVNAANKEK 121
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD-LSSLYFMTS 374
D D M+ Q G D+ + +S ++ IA+QGP + IL++ T + + + Y+
Sbjct: 122 DFDWMLKHQ-----FG-DVKFENVS-DQYSQIALQGPKAMDILRKLTKEEYIPTKYYHAV 174
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSLS 431
+ G+PC +++ GYTGEDGVE+ + E + + LL + E + GLGARD+L
Sbjct: 175 FDAVVGGMPCIVSKTGYTGEDGVELYLKNEYAEKMWDLLLENGKEEGLVPCGLGARDTLR 234
Query: 432 GDITL 436
+ ++
Sbjct: 235 MEASM 239
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLD-LSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
IA+QGP + IL++ T + + + Y+ + G+PC +++ GYTGEDGVE+ + E
Sbjct: 146 IALQGPKAMDILRKLTKEEYIPTKYYHAVFDAVVGGMPCIVSKTGYTGEDGVELYLKNEY 205
Query: 531 CTHIVEALLSD---EDVKLAGLGARDSL 555
+ + LL + E + GLGARD+L
Sbjct: 206 AEKMWDLLLENGKEEGLVPCGLGARDTL 233
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIA 80
F G + I+++ + + R G+ IR ++ N + +G TSG +P L +
Sbjct: 268 FIGKAAIEAKGEPKIQRVGLKVVGRGI-IREEQDVL-LNGEIIGHTTSGTQAPFLNMPVG 325
Query: 81 MGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
M ++ Y++VG +L V VR ++V+V++ +PF K
Sbjct: 326 MALLDARYTEVGTKLEVDVRGRKVEVEIIPLPFYK 360
>gi|338731628|ref|YP_004661020.1| aminomethyltransferase [Thermotoga thermarum DSM 5069]
gi|335365979|gb|AEH51924.1| aminomethyltransferase [Thermotoga thermarum DSM 5069]
Length = 362
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 130/235 (55%), Gaps = 12/235 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+TPLY+ HLS G KMV FAG+ MP+QY ITA + R V+VFDVSHM + +V G+
Sbjct: 2 NKTPLYESHLSLGAKMVDFAGWLMPLQYEG--ITAEVMAVRRNVAVFDVSHMGEIIVEGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++L+ I + L G+ S+ N+ GGI DDL+ + E+ LV NA+ K D
Sbjct: 60 DTAKFLDHILTNNFSTLKVGQVVYSVMCNQNGGIIDDLLAYRLGENKAMLVVNAANTKKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ +V FK KD F GLIAVQGP S + L ++ DLS+L + +
Sbjct: 120 YEWIVQNAKNFKVTVKDESFSF------GLIAVQGPTSESFLSKYLP-DLSTLGYYSFAS 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARD 428
+ G C ++R GYTGEDG EI E+ I E LL + +K AGLGARD
Sbjct: 173 YVLFGKNCLVSRTGYTGEDGFEIYCKWEETPFIWEQLLDRGKEFGIKPAGLGARD 227
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 437 NTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYF 496
NT + + + FK KD F GLIAVQGP S + L ++ DLS+L +
Sbjct: 115 NTKKDYEWIVQNAKNFKVTVKDESFSF------GLIAVQGPTSESFLSKYLP-DLSTLGY 167
Query: 497 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARD 553
+ + G C ++R GYTGEDG EI E+ I E LL + +K AGLGARD
Sbjct: 168 YSFASYVLFGKNCLVSRTGYTGEDGFEIYCKWEETPFIWEQLLDRGKEFGIKPAGLGARD 227
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + Q ++GV R+ G G I R G +++ + +G ITSG SP+L+++I
Sbjct: 263 FIGKESLLKQKENGVKRRIRGLKLDGRRIARHGMKVYK-DGVEIGYITSGTFSPTLEESI 321
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
A G + KVG E+ V VR V K+ K+PF +
Sbjct: 322 AFGMLYGDL-KVGDEVQVDVRGSMVLAKIVKLPFYR 356
>gi|85715196|ref|ZP_01046180.1| glycine cleavage system T protein [Nitrobacter sp. Nb-311A]
gi|85698111|gb|EAQ35984.1| glycine cleavage system T protein [Nitrobacter sp. Nb-311A]
Length = 387
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 144/243 (59%), Gaps = 20/243 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
Q TPL+ L L+ GGKMV FAG+ MPVQY + + HLHTR+ +FDVSHM Q +
Sbjct: 12 QETPLHALLLARGGKMVAFAGYDMPVQYPS-GVLKEHLHTRASAGLFDVSHMGQIALRPK 70
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G R+ L E + D+ + PG+ + FTN GGI DDL+V L D LFLV N +
Sbjct: 71 SGNVRDAALALERLVPQDIVAVAPGRQRYAQFTNAAGGILDDLMVVN-LGDHLFLVVNGA 129
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D A R + L ++ L+ +R L+A+QGP ++++L + + ++ F
Sbjct: 130 CKAAD-----EAHLR-EHLSDACTIEVLA--DRALVALQGPKAASVLAKICP-EAPAMRF 180
Query: 372 M--TSRPCTIAG--IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
M ++R +AG + C ++R+GYTGEDG EIS+PG ++V ALL D DV GLGAR
Sbjct: 181 MDASARIMRVAGDAVDCLVSRSGYTGEDGYEISIPGAHAENVVSALLDDPDVMPVGLGAR 240
Query: 428 DSL 430
DSL
Sbjct: 241 DSL 243
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 13 KRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGA 65
K RR GGFPGA +I SQ + G +R+R G G P+R G +F + +G
Sbjct: 273 KSRRSGGARAGGFPGADVILSQFEQGAARRRVGMKPEGRAPVREGALLFADAGSVDPIGT 332
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG PSL I+MGY+ +++ G ++ VR +R+ ++V MPFV NY
Sbjct: 333 VTSGGFGPSLNAPISMGYLPVSHAATGGLVFADVRGQRLPLRVCTMPFVPHNY 385
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 5/92 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFM--TSRPCTIAG--IPCTLTRAGYTGEDGVE 523
+R L+A+QGP ++++L + + ++ FM ++R +AG + C ++R+GYTGEDG E
Sbjct: 153 DRALVALQGPKAASVLAKICP-EAPAMRFMDASARIMRVAGDAVDCLVSRSGYTGEDGYE 211
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
IS+PG ++V ALL D DV GLGARDSL
Sbjct: 212 ISIPGAHAENVVSALLDDPDVMPVGLGARDSL 243
>gi|296137002|ref|YP_003644244.1| glycine cleavage system T protein [Thiomonas intermedia K12]
gi|295797124|gb|ADG31914.1| glycine cleavage system T protein [Thiomonas intermedia K12]
Length = 386
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 131/241 (54%), Gaps = 20/241 (8%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL G +MVPFAG++MPVQY I A HLHTR +FD+SHM Q + G
Sbjct: 12 TPLHALHLELGARMVPFAGYAMPVQY-PKGILAEHLHTRQSAGLFDISHMGQVALRGDDA 70
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLE-----DSLFLVSNASRR 313
LE++ D+H L GK +LFTNEQGG+ DDL+V LFL+ NA+ +
Sbjct: 71 AAALETLVPMDIHGLPEGKQRYALFTNEQGGVLDDLMVIPRQRADGAGQELFLIVNAACK 130
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ L+ DR + + E+ L+A+QGP + R + + L FMT
Sbjct: 131 VQDVALLQTLSDR---------CEVVPMPEQALLALQGPQAVQTFARLVP-EAADLVFMT 180
Query: 374 SRPCTIA----GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
R ++ I TR+GYTGEDG+EISV + LLS +V+ GLGARD+
Sbjct: 181 GRWMDVSTEGGAIRIFATRSGYTGEDGLEISVAAADAQRLARLLLSLPEVEPIGLGARDT 240
Query: 430 L 430
L
Sbjct: 241 L 241
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIKSG--VSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA +I +QI R+R G P+R G E+ A+ + G ++SG +PS
Sbjct: 280 AGGFPGAEVILAQIDQPNLAPRRRIGLIGLDRTPVREGTELLAADGRSAGRVSSGSFAPS 339
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AM Y+ ++ L+ +VR + V +++ MPFV Y+
Sbjct: 340 AGGPVAMAYVAAEFAVPAGTLYAQVRGRAVPMQLQPMPFVPHRYW 384
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA----GIPCTLTRAGYTGEDGVE 523
E+ L+A+QGP + R + + L FMT R ++ I TR+GYTGEDG+E
Sbjct: 151 EQALLALQGPQAVQTFARLVP-EAADLVFMTGRWMDVSTEGGAIRIFATRSGYTGEDGLE 209
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
ISV + LLS +V+ GLGARD+L
Sbjct: 210 ISVAAADAQRLARLLLSLPEVEPIGLGARDTL 241
>gi|325292794|ref|YP_004278658.1| glycine cleavage system protein T2 [Agrobacterium sp. H13-3]
gi|325060647|gb|ADY64338.1| glycine cleavage system protein T2 [Agrobacterium sp. H13-3]
Length = 379
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 142/274 (51%), Gaps = 25/274 (9%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+S G +MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q +V K
Sbjct: 10 TPLHSLHVSLGARMVPFAGYDMPVQYPA-GVLKEHLQTRTSAGLFDVSHMGQVIVKAKSG 68
Query: 259 EEW-----LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
LE + D+ L G+ FT+E G I DDL++T D LF+V NA+ +
Sbjct: 69 NNADAAIALEKLVPVDILGLKEGRQRYGFFTDENGCILDDLMITNR-GDHLFVVVNAACK 127
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ M A L + L ++R LIA+QGP + +L +S + FM
Sbjct: 128 DADVAHMKA------HLSDTCDITLL--DDRALIALQGPRAEAVLAELW-AGVSEMKFMD 178
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL--- 430
+ +PC ++R+GY+GEDG EISVP E+ I +ALL D + GLGARDSL
Sbjct: 179 VLEVPLHDVPCIVSRSGYSGEDGFEISVPAEKAEEIAKALLEHPDCEPIGLGARDSLRLE 238
Query: 431 ------SGDITLNTPVPHGSLKLSNDRFKSLGKD 458
DI T SL+ + + + G D
Sbjct: 239 AGLCLYGNDIDTTTSPIEASLEWAIQKARRAGGD 272
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSL 75
GGFPGA I ++K G SR+R G G P+R ++F + + +G +TSG PS+
Sbjct: 275 GGFPGAERILGELKDGTSRRRVGLKPEGKAPVRGHSKLFADAEGKTEIGEVTSGGFGPSV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ AY+ G ++ VR K + V V +PF+K Y
Sbjct: 335 EGPVAMGYVPAAYTAPGTAIFAEVRGKYLPVTVAALPFIKPTY 377
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R LIA+QGP + +L +S + FM + +PC ++R+GY+GEDG EISV
Sbjct: 148 DDRALIALQGPRAEAVLAELW-AGVSEMKFMDVLEVPLHDVPCIVSRSGYSGEDGFEISV 206
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E+ I +ALL D + GLGARDSL
Sbjct: 207 PAEKAEEIAKALLEHPDCEPIGLGARDSL 235
>gi|160940405|ref|ZP_02087750.1| hypothetical protein CLOBOL_05295 [Clostridium bolteae ATCC
BAA-613]
gi|158436985|gb|EDP14752.1| hypothetical protein CLOBOL_05295 [Clostridium bolteae ATCC
BAA-613]
Length = 362
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 137/239 (57%), Gaps = 12/239 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLYD+H+ + GK+VPFAG+ +PVQY + A H+ R + +FDVSHM + +++G
Sbjct: 2 ELKTPLYDMHVKYKGKIVPFAGYLLPVQY-EKGVIAEHMAVREQCGLFDVSHMGEILLSG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ + + D ++ G S NE GG+ DDLIV K ++S F+V NAS +
Sbjct: 61 PDALKNVNMLLTNDYTVMEDGTARYSPMCNEAGGVVDDLIVYKIKDNSYFIVVNASNKDK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD-LSSLYFMTS 374
D M +D D+ L+ +S + G +A+QGP + +L++ D D + Y+
Sbjct: 121 DYQWM---KDHVSG---DVELKDISG-QVGQLALQGPKALDVLKKVADPDAIPDKYYTFK 173
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+ C I GIPC +++ GYTGEDGVEI + G + E LL +E + GLGARD+L
Sbjct: 174 KDCCIDGIPCIISKTGYTGEDGVEIYMAGNDAPRLWELLLEAGREEGLIPCGLGARDTL 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLD-LSSLYFMTSRPCTIAGIPCTLTRAGY 516
D+ L+ +S + G +A+QGP + +L++ D D + Y+ + C I GIPC +++ GY
Sbjct: 132 DVELKDISGQ-VGQLALQGPKALDVLKKVADPDAIPDKYYTFKKDCCIDGIPCIISKTGY 190
Query: 517 TGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
TGEDGVEI + G + E LL +E + GLGARD+L
Sbjct: 191 TGEDGVEIYMAGNDAPRLWELLLEAGREEGLIPCGLGARDTL 232
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 30 QIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYS 89
Q K ++RKR G TG I +E A +Q++G TSG P L AM ++ AY
Sbjct: 274 QEKGPLTRKRVGLKVTGRGIIREHEPVFAGEQQIGTTTSGTHCPYLGYPAAMALVDIAYK 333
Query: 90 KVGVELWVRVRDKRVDVKVTKMPFVK 115
+ G ++ V VR +RV +V K+PF K
Sbjct: 334 EPGTQVEVDVRGRRVGAEVVKLPFYK 359
>gi|398912636|ref|ZP_10656080.1| glycine cleavage system T protein, partial [Pseudomonas sp. GM49]
gi|398182007|gb|EJM69542.1| glycine cleavage system T protein, partial [Pseudomonas sp. GM49]
Length = 332
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 194 SAEQ--RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQT 251
S EQ +TPL+ LH+ G +MVPFAG+ MPVQY + + H HTR + +FDVSHM Q
Sbjct: 2 STEQLLKTPLHALHIELGARMVPFAGYDMPVQY-PLGVMKEHQHTRDQAGLFDVSHMGQI 60
Query: 252 VVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+TG + + LE++ D+ +L G ++FTN GGI DDL+V D LFLV NA+
Sbjct: 61 RLTGANAAKALETLVPVDIIDLPVGMQRYAMFTNATGGILDDLMVANLGNDELFLVVNAA 120
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ A R + +G ++ L EER L+A+QGP + T+L R +++ + F
Sbjct: 121 CKDQDL-----AHLR-QHIGDQCTIEPLF-EERALLALQGPAAVTVLARLAP-EVARMTF 172
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + G+ C ++R+GYTGEDG EISVP + ALL++ +V GLGARDSL
Sbjct: 173 MQFARVKLLGVDCFVSRSGYTGEDGFEISVPAANAEALARALLAEAEVAAIGLGARDSL 231
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
EER L+A+QGP + T+L R +++ + FM + G+ C ++R+GYTGEDG EISV
Sbjct: 144 EERALLALQGPAAVTVLARLAP-EVARMTFMQFARVKLLGVDCFVSRSGYTGEDGFEISV 202
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + ALL++ +V GLGARDSL
Sbjct: 203 PAANAEALARALLAEAEVAAIGLGARDSL 231
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFN 57
I + LL K RR GGFPGA + +Q ++GV+RKR G P+R G EI N
Sbjct: 251 IEASLLWAISKPRRADGARAGGFPGAETVFAQQQAGVNRKRVGLLPQERTPVREGAEIVN 310
Query: 58 ANDQRVGAITSGCPSPSL 75
+G++ SG P+L
Sbjct: 311 EAGDIIGSVCSGGFGPTL 328
>gi|217977401|ref|YP_002361548.1| glycine cleavage system T protein [Methylocella silvestris BL2]
gi|217502777|gb|ACK50186.1| glycine cleavage system T protein [Methylocella silvestris BL2]
Length = 377
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 134/244 (54%), Gaps = 15/244 (6%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+P RTPLYDLHL G ++VPFAG+ MPVQY + A HLHTR+K +FDVSHM Q
Sbjct: 5 SAPLPLARTPLYDLHLELGARLVPFAGYEMPVQY-PPGVIAEHLHTRAKAGLFDVSHMGQ 63
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS----LFL 306
+ G H E + D+ L+PG+ + + G I DDL+VT+ + LFL
Sbjct: 64 ALFEGAHALRAFERLTPGDIASLNPGQMRYTQLLDANGHILDDLMVTRLANEGGRQRLFL 123
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
V NA+ + D + AA F + L+A+QGP ++ +L++ + +
Sbjct: 124 VVNAASKAADFAHISAALPGFA---------LTPLPQLALLALQGPQAAEVLEKIVPV-V 173
Query: 367 SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
S L FM S + G+ ++R+GYTGEDG EIS+P + LLSD V GLGA
Sbjct: 174 SRLTFMRSAEFEVDGVRLRISRSGYTGEDGFEISLPAAKAEVFARTLLSDPRVFPVGLGA 233
Query: 427 RDSL 430
RDSL
Sbjct: 234 RDSL 237
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR GGFPG + + + G R+R G G P R G EI + + +G +TSG
Sbjct: 267 KRRRVEGGFPGFARLAQVMARGPERRRVGLILDGKAPAREGAEIETPDGRAIGRLTSGGY 326
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+PSL + IAMGY+ A + VG + + VR K ++ PF+ Y
Sbjct: 327 APSLGRPIAMGYVAAAEAVVGAPVNLIVRGKPTPARIAATPFMPHAY 373
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 476 GPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIV 535
GP ++ +L++ + +S L FM S + G+ ++R+GYTGEDG EIS+P +
Sbjct: 159 GPQAAEVLEKIVPV-VSRLTFMRSAEFEVDGVRLRISRSGYTGEDGFEISLPAAKAEVFA 217
Query: 536 EALLSDEDVKLAGLGARDSL 555
LLSD V GLGARDSL
Sbjct: 218 RTLLSDPRVFPVGLGARDSL 237
>gi|154318225|ref|XP_001558431.1| hypothetical protein BC1G_03280 [Botryotinia fuckeliana B05.10]
Length = 475
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 142/256 (55%), Gaps = 18/256 (7%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS + ++TPLYDLH+S+GGKMVPF GF MPVQY +S++ASH TR S+FDVSHM+Q
Sbjct: 71 SSSTELRKTPLYDLHISNGGKMVPFGGFHMPVQYSGLSVSASHHFTREHASLFDVSHMVQ 130
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
G +L+ I A + L +G LS L GGI DD I+T+ + ++V+N
Sbjct: 131 HRFEGPGATAFLQRITPASIANLALHQGGLSCLLHPGTGGIVDDTIITRLGPELFYVVTN 190
Query: 310 ASRRKVDMDLMVAAQDRF-KSLGKDIHLQFLSAEERGLIAVQGPLSSTIL-----QRHTD 363
A R+ D+ + + F K G+ + + L GL+A+QGP S IL + +
Sbjct: 191 AGCREKDLKYLGEELEAFTKEGGEKVGWEVLDG--WGLVALQGPESEEILKELLAEEMKE 248
Query: 364 LDLSSLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--- 414
+ F SR I ++R GYTGEDG EIS+P + + E+LL
Sbjct: 249 GGFDNFLFGQSRFVKIRLADGSTSGNLLVSRGGYTGEDGFEISIPESETVMVTESLLKSA 308
Query: 415 SDEDVKLAGLGARDSL 430
+ ++LAGLGARDSL
Sbjct: 309 GETRLQLAGLGARDSL 324
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 6/114 (5%)
Query: 12 GKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGA 65
GK RR GGF GA +I Q+ SGV R+R G G P R G +I N +++G
Sbjct: 353 GKERRTEGGFHGAEVILKQLTPKSKGGSGVERRRIGLIVEGAPAREGADIVNDKGEKIGN 412
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
ITSGCPSP+L KN+AMGYI+ + K G ++ V VR K KVTKMPFV S Y+
Sbjct: 413 ITSGCPSPTLGKNVAMGYIKDGFHKAGTDVSVVVRGKERKAKVTKMPFVPSKYW 466
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 470 GLIAVQGPLSSTIL-----QRHTDLDLSSLYFMTSRPCTI------AGIPCTLTRAGYTG 518
GL+A+QGP S IL + + + F SR I ++R GYTG
Sbjct: 225 GLVALQGPESEEILKELLAEEMKEGGFDNFLFGQSRFVKIRLADGSTSGNLLVSRGGYTG 284
Query: 519 EDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
EDG EIS+P + + E+LL + ++LAGLGARDSL
Sbjct: 285 EDGFEISIPESETVMVTESLLKSAGETRLQLAGLGARDSL 324
>gi|347441644|emb|CCD34565.1| similar to aminomethyltransferase [Botryotinia fuckeliana]
Length = 475
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 142/256 (55%), Gaps = 18/256 (7%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS + ++TPLYDLH+S+GGKMVPF GF MPVQY +S++ASH TR S+FDVSHM+Q
Sbjct: 71 SSSTELRKTPLYDLHISNGGKMVPFGGFHMPVQYSGLSVSASHHFTREHASLFDVSHMVQ 130
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
G +L+ I A + L +G LS L GGI DD I+T+ + ++V+N
Sbjct: 131 HRFEGPGATAFLQRITPASIANLALHQGGLSCLLHPGTGGIVDDTIITRLGPELFYVVTN 190
Query: 310 ASRRKVDMDLMVAAQDRF-KSLGKDIHLQFLSAEERGLIAVQGPLSSTIL-----QRHTD 363
A R+ D+ + + F K G+ + + L GL+A+QGP S IL + +
Sbjct: 191 AGCREKDLKYLGEELEAFTKEGGEKVGWEVLDG--WGLVALQGPESEEILKELLAEEMKE 248
Query: 364 LDLSSLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--- 414
+ F SR I ++R GYTGEDG EIS+P + + E+LL
Sbjct: 249 GGFDNFLFGQSRFVKIRLADGSTSGNLLVSRGGYTGEDGFEISIPESETVMVTESLLKSA 308
Query: 415 SDEDVKLAGLGARDSL 430
+ ++LAGLGARDSL
Sbjct: 309 GETRLQLAGLGARDSL 324
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 6/114 (5%)
Query: 12 GKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGA 65
GK RR GGF GA +I Q+ SGV R+R G G P R G +I N +++G
Sbjct: 353 GKERRTEGGFHGAEVILKQLTPKSKGGSGVERRRIGLIVEGAPAREGADIVNDKGEKIGN 412
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
ITSGCPSP+L KN+AMGYI+ + K G ++ V VR K KVTKMPFV S Y+
Sbjct: 413 ITSGCPSPTLGKNVAMGYIKDGFHKAGTDVSVVVRGKERKAKVTKMPFVPSKYW 466
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 470 GLIAVQGPLSSTIL-----QRHTDLDLSSLYFMTSRPCTI------AGIPCTLTRAGYTG 518
GL+A+QGP S IL + + + F SR I ++R GYTG
Sbjct: 225 GLVALQGPESEEILKELLAEEMKEGGFDNFLFGQSRFVKIRLADGSTSGNLLVSRGGYTG 284
Query: 519 EDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
EDG EIS+P + + E+LL + ++LAGLGARDSL
Sbjct: 285 EDGFEISIPESETVMVTESLLKSAGETRLQLAGLGARDSL 324
>gi|421604199|ref|ZP_16046433.1| glycine cleavage system aminomethyltransferase T, partial
[Bradyrhizobium sp. CCGE-LA001]
gi|404263690|gb|EJZ29136.1| glycine cleavage system aminomethyltransferase T, partial
[Bradyrhizobium sp. CCGE-LA001]
Length = 268
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 132/230 (57%), Gaps = 16/230 (6%)
Query: 206 LSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE-----E 260
+S GGKMVPFAG+ MPVQY A + HL TR+ +FDVSHM Q + K +
Sbjct: 1 MSLGGKMVPFAGYDMPVQYPA-GVLKEHLQTRTNAGLFDVSHMGQLALRAKSGKVEDAAR 59
Query: 261 WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLM 320
LE + D+ + PG+ + FTNE GGI DDL+V D LFLV NA+ + D +
Sbjct: 60 ALERLVPQDIVAIAPGRQRYAQFTNEDGGILDDLMVA-NFGDHLFLVVNAACKAEDEAHL 118
Query: 321 VAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA 380
A +L D ++ L+ +R LIA+QGP + + L + D ++ FM S P +A
Sbjct: 119 RA------NLSGDCVIEQLA--DRALIALQGPKAESALTKFC-ADAPAMKFMDSGPHEVA 169
Query: 381 GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
GI C ++R+GYTGEDG EISVP + + LL + DV GLGARDSL
Sbjct: 170 GIKCFVSRSGYTGEDGFEISVPAGDAERLAKMLLENPDVLPIGLGARDSL 219
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + + L + D ++ FM S P +AGI C ++R+GYTGEDG EISVP
Sbjct: 133 DRALIALQGPKAESALTKFC-ADAPAMKFMDSGPHEVAGIKCFVSRSGYTGEDGFEISVP 191
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL + DV GLGARDSL
Sbjct: 192 AGDAERLAKMLLENPDVLPIGLGARDSL 219
>gi|344230098|gb|EGV61983.1| hypothetical protein CANTEDRAFT_131436 [Candida tenuis ATCC 10573]
gi|344230099|gb|EGV61984.1| glycine cleavage system T protein [Candida tenuis ATCC 10573]
Length = 393
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 132/244 (54%), Gaps = 18/244 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLY H+ +G K VP+AGF MP+ Y +S SH RSKV +FDVSHMLQ TG++
Sbjct: 15 RTPLYKSHVKYGAKFVPYAGFEMPILYKGLSHIDSHKWVRSKVGLFDVSHMLQHTFTGRY 74
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
L+ + D+ L P +LS+ NE GGI DD I+TK E ++V+NA R+ D+
Sbjct: 75 AVSVLQKMTPIDLSGLSPNTSSLSVLLNETGGIIDDCIITKVTEGEYYMVTNAGCREKDL 134
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + + + I E L+A+QGP ++ IL +++ DLS L F
Sbjct: 135 AFINSTLADYDDVNHSIF-------ESTLLAIQGPKAAEILSKYSSYDLSKLKFGAMVRT 187
Query: 378 TIAGIPCT---LTRAGYTGEDGVEISVPGEQCTHIVEA-----LLSDED---VKLAGLGA 426
I + + ++R GYTGEDG E+S+P I E+ L DE V+ GL A
Sbjct: 188 GINSLISSQIQISRTGYTGEDGFELSIPSSSKDEIQESNEFFQSLVDEQPDVVQPIGLAA 247
Query: 427 RDSL 430
RDSL
Sbjct: 248 RDSL 251
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 9 IFPGKRRRETGG--FPGASIIQSQI--KSGVSRKRTGFTSTGVPIRPGYEIFNAND-QRV 63
+ P RR T F G I QI K V R+R G T+TG R G +IF+ + V
Sbjct: 278 LIPKTRRNVTDSQKFNGYDRIIQQINDKKSVPRRRIGITTTGPAPRSGSKIFDTQSGEEV 337
Query: 64 GAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G +TSG SP L N+ YI+ K+G + V VR K+ V K+PF+++N+Y
Sbjct: 338 GVVTSGLLSPILGHNVGQAYIDKKV-KIGASVDVEVRGKKRPGIVAKLPFIQNNFY 392
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT---LTRAGYTGEDGVEI 524
E L+A+QGP ++ IL +++ DLS L F I + + ++R GYTGEDG E+
Sbjct: 153 ESTLLAIQGPKAAEILSKYSSYDLSKLKFGAMVRTGINSLISSQIQISRTGYTGEDGFEL 212
Query: 525 SVPGEQCTHIVEA-----LLSDED---VKLAGLGARDSL 555
S+P I E+ L DE V+ GL ARDSL
Sbjct: 213 SIPSSSKDEIQESNEFFQSLVDEQPDVVQPIGLAARDSL 251
>gi|333914139|ref|YP_004487871.1| glycine cleavage system T protein [Delftia sp. Cs1-4]
gi|333744339|gb|AEF89516.1| glycine cleavage system T protein [Delftia sp. Cs1-4]
Length = 391
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 132/235 (56%), Gaps = 15/235 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+DLH G +MVPFAG+SMPVQY + A HLHTR +FDVSHM Q + G
Sbjct: 25 KTPLFDLHQELGARMVPFAGYSMPVQY-PQGLMAEHLHTREAAGLFDVSHMGQISLRGPD 83
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ DV L + L N+ GGI DDL+ + ED LFL+ N + + D+
Sbjct: 84 AGAALESLLPMDVLGLGEHRQRYGLLLNDAGGILDDLMFVRR-EDDLFLIVNGACKHEDL 142
Query: 318 DLMVAAQDRFKSLGK--DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ A +G+ +I QF +RGL+A+QGP ++ ++R D + L FMT
Sbjct: 143 AHIEA------RIGQRCEIEPQF----DRGLLALQGPQAAAAMERLLP-DTAGLVFMTGG 191
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G +TR+GYTGEDG EIS+P ALL+ +V+ GLGAR+SL
Sbjct: 192 YFDWEGAELYITRSGYTGEDGFEISLPASHAEAFARALLAQPEVRPVGLGARNSL 246
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 19 GGFPGASIIQSQIKSG--VSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA+ + +Q++S ++RKR G + VP+R G E+ +A+ ++VG +TSG SP+L
Sbjct: 286 GGFPGAATVLAQLQSPELLTRKRVGLVALERVPVREGTELLDASGRKVGEVTSGLLSPTL 345
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +A+ Y+EP + +G L VR K V ++V PFV Y+
Sbjct: 346 NQPVALAYVEPGSAAIGTTLQAMVRGKAVPMQVQATPFVAPRYH 389
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
+I QF +RGL+A+QGP ++ ++R D + L FMT G +TR+GYT
Sbjct: 154 EIEPQF----DRGLLALQGPQAAAAMERLLP-DTAGLVFMTGGYFDWEGAELYITRSGYT 208
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EIS+P ALL+ +V+ GLGAR+SL
Sbjct: 209 GEDGFEISLPASHAEAFARALLAQPEVRPVGLGARNSL 246
>gi|237839583|ref|XP_002369089.1| aminomethyltransferase, mitochondrial, putative [Toxoplasma gondii
ME49]
gi|211966753|gb|EEB01949.1| aminomethyltransferase, mitochondrial, putative [Toxoplasma gondii
ME49]
Length = 866
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 142/247 (57%), Gaps = 7/247 (2%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
SA + +PL+++H S G K V F G +P Y + +SHLHTR+ S+FD+++ +
Sbjct: 451 SAVRPSPLHEVHASLGAKFVKFYGLLLPFAYEGEGVVSSHLHTRTCASLFDLAYRQHYRI 510
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G + ++LE + V D+ L + +LFTNEQGGI+DD+IV D L ++ NA +
Sbjct: 511 RGDNAAQFLERLVVGDIQSLLETESRFTLFTNEQGGIEDDVIVA-VHRDFLLIIGNACNK 569
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL---DLSSLY 370
+ + A + G+ + ++ + E+ L++VQGP + ++ + +L DL +
Sbjct: 570 SKILSRLDAEAAEARGRGQTVTVE--AVEDYTLLSVQGPQAMDVMSQAVNLSNADLVRMP 627
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED-VKLAGLGARDS 429
FM+S C++ G+ C LTR G++GEDG EIS+P + T I LL ++ AG+GARD+
Sbjct: 628 FMSSYLCSVEGVACVLTRCGFSGEDGFEISLPASEATRIFSILLEKSSLLRPAGVGARDT 687
Query: 430 LSGDITL 436
L + L
Sbjct: 688 LRQEAGL 694
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDL---DLSSLYFMTSRPC 502
+L + ++ G+ + + E+ L++VQGP + ++ + +L DL + FM+S C
Sbjct: 575 RLDAEAAEARGRGQTVTVEAVEDYTLLSVQGPQAMDVMSQAVNLSNADLVRMPFMSSYLC 634
Query: 503 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED-VKLAGLGARDSL 555
++ G+ C LTR G++GEDG EIS+P + T I LL ++ AG+GARD+L
Sbjct: 635 SVEGVACVLTRCGFSGEDGFEISLPASEATRIFSILLEKSSLLRPAGVGARDTL 688
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 48/153 (31%)
Query: 12 GKRRRETGGFPGASIIQ----------SQIKSG-------------------------VS 36
G+RRR+ FPGA+ I +Q + G +
Sbjct: 717 GRRRRQEANFPGAARILAQLAQQQLLQNQTRKGPASVDALQKALAAEAEKAGLREENRLR 776
Query: 37 RKRTGF-------TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYS 89
RKR G +S GV +R + VG +TS C +PSL++ I M Y++ Y+
Sbjct: 777 RKRVGLCLPAGGGSSKGVTVR------EEGGKNVGIVTSSCFAPSLQRTIGMAYLDLPYT 830
Query: 90 KVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
+ + + +V +MPF+ YY P
Sbjct: 831 LPKTRVVLDTNLPTPEAQVCQMPFLPGAYYKVP 863
>gi|401840162|gb|EJT43069.1| GCV1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 404
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 136/241 (56%), Gaps = 11/241 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+DLH+S GG MVP+AG+SMPV Y + SH TR+ +FDVSHMLQ+ ++G
Sbjct: 21 KKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKLSGP 80
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLF-LVSNASRRKV 315
H ++L + D L GTLS+ N +GG+ DD I+TK +++ F +V+NA +
Sbjct: 81 HAVKFLNRVTPTDFDTLPTESGTLSVLLNREGGVVDDTIITKENQNNKFHIVTNAGCAER 140
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLSSLY 370
D++ + + +L D + + E + L+A+QGP + +L+ DL L+
Sbjct: 141 DIEFLRGELQNYPAL--DCRWKII--EGKSLLALQGPKAKDVLEPLLEKAAQGRDLKELF 196
Query: 371 FMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
F R + G + R GYTGEDG EISVP E+ E LL++ K GL ARDS
Sbjct: 197 FGQRREFALKDGTLIQIARGGYTGEDGFEISVPNEKAIEFAEKLLANPVAKPIGLAARDS 256
Query: 430 L 430
L
Sbjct: 257 L 257
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 467 EERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPCTIA-GIPCTLTRAGYTGED 520
E + L+A+QGP + +L+ DL L+F R + G + R GYTGED
Sbjct: 163 EGKSLLALQGPKAKDVLEPLLEKAAQGRDLKELFFGQRREFALKDGTLIQIARGGYTGED 222
Query: 521 GVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G EISVP E+ E LL++ K GL ARDSL
Sbjct: 223 GFEISVPNEKAIEFAEKLLANPVAKPIGLAARDSL 257
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 17 ETGGFPGASIIQSQIKS-GVSRKRTGFT--STGVPIRPGYEIFNANDQ-RVGAITSGCPS 72
E F G + I +Q+ + +R R F G R G +IF + Q VG +TSG S
Sbjct: 295 EKDRFNGYAKIMNQLNNKAYNRIRVAFKYLKNGPAARNGVKIFLPDAQTEVGLVTSGSAS 354
Query: 73 PSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSL NI Y+E + K G EL V+VR+K +++ KMP V ++YY
Sbjct: 355 PSLNNINIGQAYVEKGHHKSGTELLVQVRNKFYPIELAKMPLVPTHYY 402
>gi|84683408|ref|ZP_01011311.1| predicted aminomethyltransferase, tetrahydrofolate dependent
[Maritimibacter alkaliphilus HTCC2654]
gi|84668151|gb|EAQ14618.1| predicted aminomethyltransferase, tetrahydrofolate dependent
[Maritimibacter alkaliphilus HTCC2654]
Length = 364
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 138/239 (57%), Gaps = 25/239 (10%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+DLH+ GGKMVPFAG+ MPVQY + + HLHTR+ +FDVSHM Q ++ +
Sbjct: 5 KRTPLFDLHVERGGKMVPFAGWEMPVQY-PLGVMKEHLHTRAAAGLFDVSHMGQVIL--R 61
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LE++ DV L G+ +FTN GGI DDL++ D LFLV NA+ D
Sbjct: 62 CDPAALETLVPVDVVGLAEGRQRYGVFTNAAGGIMDDLMLANR-GDHLFLVVNAAMADQD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A LG + + +R L+A+QGP + L R D++ + FM
Sbjct: 121 IAHLRA------HLGDAVEV----ITDRALLALQGPKAEAALARIAP-DVAGMRFMD--- 166
Query: 377 CTIAGIPCT-----LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+A IP ++R+GYTGEDG EISV Q T + EALL+ E+V+ GLGARDSL
Sbjct: 167 --LAVIPSDYGALWVSRSGYTGEDGYEISVGEAQATALAEALLTMEEVEPIGLGARDSL 223
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 14 RRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGC 70
RR + FPGA+ I QI++G RKR G G P+R G ++F + D +G++TSG
Sbjct: 255 RRTDRTDFPGAATILDQIENGAPRKRVGLLPEGRAPMRAGTQLFASPDAGDPIGSVTSGA 314
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PS+++ ++MGY+ + + G L+ VR KR+ V V +PF + +
Sbjct: 315 FGPSIERPMSMGYVPTSSAAPGTTLFGDVRGKRLPVTVAPLPFRPATF 362
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 11/93 (11%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT-----LTRAGYTGEDGV 522
+R L+A+QGP + L R D++ + FM +A IP ++R+GYTGEDG
Sbjct: 137 DRALLALQGPKAEAALARIAP-DVAGMRFMD-----LAVIPSDYGALWVSRSGYTGEDGY 190
Query: 523 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISV Q T + EALL+ E+V+ GLGARDSL
Sbjct: 191 EISVGEAQATALAEALLTMEEVEPIGLGARDSL 223
>gi|160899760|ref|YP_001565342.1| glycine cleavage system T protein [Delftia acidovorans SPH-1]
gi|160365344|gb|ABX36957.1| glycine cleavage system T protein [Delftia acidovorans SPH-1]
Length = 391
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 132/235 (56%), Gaps = 15/235 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+DLH G +MVPFAG+SMPVQY + A HLHTR +FDVSHM Q + G
Sbjct: 25 KTPLFDLHQELGARMVPFAGYSMPVQY-PQGLMAEHLHTREAAGLFDVSHMGQISLRGPD 83
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LES+ DV L + L N+ GGI DDL+ + ED LFL+ N + + D+
Sbjct: 84 AGAALESLLPMDVLGLGEHRQRYGLLLNDAGGILDDLMFVRR-EDDLFLIVNGACKHEDL 142
Query: 318 DLMVAAQDRFKSLGK--DIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ A +G+ +I QF +RGL+A+QGP ++ ++R D + L FMT
Sbjct: 143 AHIEA------RIGQRCEIEPQF----DRGLLALQGPQAAAAMERLLP-DTAGLVFMTGG 191
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G +TR+GYTGEDG EIS+P ALL+ +V+ GLGAR+SL
Sbjct: 192 YFDWEGAELYITRSGYTGEDGFEISLPASHAEAFARALLAQPEVRPVGLGARNSL 246
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 19 GGFPGASIIQSQIKSG--VSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA+ + +Q++S ++RKR G + VP+R G E+ +A+ ++VG +TSG SP+L
Sbjct: 286 GGFPGAATVLAQLQSPELLTRKRVGLVALERVPVREGTELLDASGRKVGQVTSGLLSPTL 345
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +A+ Y+EP + +G L VR K V ++V PFV Y+
Sbjct: 346 NQPVALAYVEPGSAAIGTTLQAMVRGKAVPMQVQATPFVAPRYH 389
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
+I QF +RGL+A+QGP ++ ++R D + L FMT G +TR+GYT
Sbjct: 154 EIEPQF----DRGLLALQGPQAAAAMERLLP-DTAGLVFMTGGYFDWEGAELYITRSGYT 208
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EIS+P ALL+ +V+ GLGAR+SL
Sbjct: 209 GEDGFEISLPASHAEAFARALLAQPEVRPVGLGARNSL 246
>gi|55980492|ref|YP_143789.1| glycine cleavage system aminomethyltransferase T [Thermus
thermophilus HB8]
gi|61213274|sp|Q5SKX0.1|GCST_THET8 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|55771905|dbj|BAD70346.1| glycine cleavage system T protein (probable aminomethyltransferase)
[Thermus thermophilus HB8]
Length = 349
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ HL G +MV FAG+ +P+QY SI HL R V VFDVSHM + +V GK
Sbjct: 2 KKTPLYEAHLRLGARMVDFAGYLLPLQY--TSIVEEHLAVRRAVGVFDVSHMGEFLVRGK 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ D +L G+ S+ NE+GG+ DD+ + + E+ +V NA+ D
Sbjct: 60 EALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ ++L K ++ A ER L+A+QGP ++++LQ TDLDLS
Sbjct: 120 L-------AHLQALAKGFRVELEDASERTALLALQGPKAASLLQGLTDLDLSQKRKNDVF 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
P +AG P L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 173 PARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 452 FKSLGKDIHLQFLSPEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
++L K ++ ER L+A+QGP ++++LQ TDLDLS P +AG P
Sbjct: 123 LQALAKGFRVELEDASERTALLALQGPKAASLLQGLTDLDLSQKRKNDVFPARVAGRPAR 182
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 183 LARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 46 GVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE--LWVRVRDKR 103
G+P R GY + + + VG +TSG SP L++ IA+ Y+E G E V VR +
Sbjct: 283 GIP-REGYRVLSGG-RPVGRVTSGGYSPLLQRGIALAYVEE-----GAEGPFQVEVRGRA 335
Query: 104 VDVKVTKMPFV 114
V ++ +PFV
Sbjct: 336 VPAALSPLPFV 346
>gi|378826034|ref|YP_005188766.1| glycine cleavage system protein T2 [Sinorhizobium fredii HH103]
gi|365179086|emb|CCE95941.1| glycine cleavage system protein T2 [Sinorhizobium fredii HH103]
Length = 387
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 131/237 (55%), Gaps = 16/237 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHLS G +MVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q ++ K
Sbjct: 18 TPLHALHLSLGARMVPFAGYEMPVQY-ADGVLKEHLHTRAAAGLFDVSHMGQIIIRPKSG 76
Query: 259 EEW-----LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
LE + DV L G+ LFTN GGI DDL++T D LFLV NA+ +
Sbjct: 77 RVGDAALALERLVPVDVLGLAEGRQRYGLFTNPDGGILDDLMITNR-GDHLFLVVNAACK 135
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D + + LG + L ++R LIA+QGP + +L D++S+ FM
Sbjct: 136 DADYAHLK------EGLGDSCDVTLL--DDRALIALQGPHAEAVLCELW-ADVASMRFMD 186
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + C ++R+GYTGEDG EIS+P + + LL DV GLGARDSL
Sbjct: 187 VAEADLHDVGCIISRSGYTGEDGFEISIPTASAVDVTQRLLEHPDVLAIGLGARDSL 243
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPS 74
GGFPGA I ++ G SR+R G G P+R G ++F D +G++TSG PS
Sbjct: 282 AGGFPGAERILAEFAGGTSRRRVGLRPEGRAPVRGGAKLFADADGAAPIGSVTSGGFGPS 341
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+E A++ G +++ VR K + V V+ +PFVK Y
Sbjct: 342 VDCPVAMGYVETAHAGNGTQIFAEVRGKYLPVTVSALPFVKQTY 385
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R LIA+QGP + +L D++S+ FM + + C ++R+GYTGEDG EIS+
Sbjct: 156 DDRALIALQGPHAEAVLCELW-ADVASMRFMDVAEADLHDVGCIISRSGYTGEDGFEISI 214
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL DV GLGARDSL
Sbjct: 215 PTASAVDVTQRLLEHPDVLAIGLGARDSL 243
>gi|418406950|ref|ZP_12980269.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
tumefaciens 5A]
gi|358007443|gb|EHJ99766.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
tumefaciens 5A]
Length = 379
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 141/274 (51%), Gaps = 25/274 (9%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH+S G +MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q +V K
Sbjct: 10 TPLHSLHVSLGARMVPFAGYDMPVQYPA-GVLKEHLQTRTSAGLFDVSHMGQVIVKAKSG 68
Query: 259 EEW-----LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
LE + D+ L G+ FT+E G I DDL++T D LF+V NA+ +
Sbjct: 69 NNADAAIALEKLVPVDILGLKEGRQRYGFFTDENGCILDDLMITNR-GDHLFVVVNAACK 127
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ M A L + L + R LIA+QGP + +L +S + FM
Sbjct: 128 DADVAHMKA------HLSDTCDITLL--DHRALIALQGPRAEAVLAELW-AGVSEMKFMD 178
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL--- 430
+ +PC ++R+GY+GEDG EISVP E+ I +ALL D + GLGARDSL
Sbjct: 179 VLEVPLHDVPCIVSRSGYSGEDGFEISVPAEKAEEIAKALLEHPDCEPIGLGARDSLRLE 238
Query: 431 ------SGDITLNTPVPHGSLKLSNDRFKSLGKD 458
DI T SL+ + + + G D
Sbjct: 239 AGLCLYGNDIDTTTSPIEASLEWAIQKARRAGGD 272
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+ R LIA+QGP + +L +S + FM + +PC ++R+GY+GEDG EISV
Sbjct: 148 DHRALIALQGPRAEAVLAELW-AGVSEMKFMDVLEVPLHDVPCIVSRSGYSGEDGFEISV 206
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E+ I +ALL D + GLGARDSL
Sbjct: 207 PAEKAEEIAKALLEHPDCEPIGLGARDSL 235
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSL 75
GGFPGA I ++K G SR+R G G P+R ++F + + +G +TSG PS+
Sbjct: 275 GGFPGAERILGELKDGTSRRRVGLKPEGKAPVRGHSKLFADAEGKTEIGEVTSGGFGPSV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ A++ G ++ VR K + V V +PF+K Y
Sbjct: 335 EGPVAMGYVPSAHTAPGTAIFAEVRGKYLPVTVAALPFIKPTY 377
>gi|296444881|ref|ZP_06886843.1| glycine cleavage system T protein [Methylosinus trichosporium OB3b]
gi|296257549|gb|EFH04614.1| glycine cleavage system T protein [Methylosinus trichosporium OB3b]
Length = 382
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 136/246 (55%), Gaps = 21/246 (8%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S A TPL LH G +M PFAG+S+P+ Y + +I A HLHTR+K S+FDVSHM Q
Sbjct: 8 SPADARAVTPLDALHHRLGARMAPFAGYSLPLSYPSGAI-AEHLHTRAKASLFDVSHMGQ 66
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKT--LEDSLFLVS 308
++TG+ LE++ AD+ L+P + + E GGI DDL+ T+ E+ L LV
Sbjct: 67 AILTGRGAARLLETLVPADLDGLEPQRTRYTQLLAEDGGILDDLMATRLPGREERLLLVV 126
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLS----STILQRHTDL 364
NA+ ++ D L+ + + L LS R L+A+QGP + STIL D
Sbjct: 127 NAAGKEQDFTLL-------RQELPQLQLSVLSG--RALLALQGPRAAATLSTILPGVEDA 177
Query: 365 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
FM P G ++R+GYTGEDG EIS P T + E LL++EDV AGL
Sbjct: 178 P-----FMGWLPAEYEGASVFVSRSGYTGEDGFEISAPAYLATRLAERLLANEDVAPAGL 232
Query: 425 GARDSL 430
ARDSL
Sbjct: 233 AARDSL 238
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSGC 70
GKRRRE GGFPG + I++ I +G +R+R G + P+R G + + + VG ITSG
Sbjct: 267 GKRRREQGGFPGFARIRAAIDNGPARRRVGLLPQSKAPLRDGATLTAPDGRIVGRITSGG 326
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIR 125
SPSL + IAMG +E A++ G+ L +R K ++V+V +PFV Y + K R
Sbjct: 327 YSPSLARPIAMGMVESAFATPGIRLASELRGKPIEVEVATLPFVPHRYASRGKDR 381
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 469 RGLIAVQGPLS----STILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 524
R L+A+QGP + STIL D FM P G ++R+GYTGEDG EI
Sbjct: 153 RALLALQGPRAAATLSTILPGVEDAP-----FMGWLPAEYEGASVFVSRSGYTGEDGFEI 207
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S P T + E LL++EDV AGL ARDSL
Sbjct: 208 SAPAYLATRLAERLLANEDVAPAGLAARDSL 238
>gi|410694753|ref|YP_003625375.1| putative Aminomethyltransferase (Glycine cleavage system T protein)
GcvT [Thiomonas sp. 3As]
gi|294341178|emb|CAZ89579.1| putative Aminomethyltransferase (Glycine cleavage system T protein)
GcvT [Thiomonas sp. 3As]
Length = 386
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 129/241 (53%), Gaps = 20/241 (8%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL G +MVPFAG++MPVQY I A HLHTR +FD+SHM Q + G
Sbjct: 12 TPLHALHLELGARMVPFAGYAMPVQY-PKGILAEHLHTRQSAGLFDISHMGQVALRGDDA 70
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLE-----DSLFLVSNASRR 313
LE++ D+ L GK +LFTNEQGG+ DDL+V LFL+ NA+ +
Sbjct: 71 AAALETLVPMDIQGLPEGKQRYALFTNEQGGVLDDLMVIPRQRADGAGQELFLIVNAACK 130
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ L+ DR + + E+ L+A+QGP + R + + L FMT
Sbjct: 131 VQDVALLQTLSDR---------CEVVPMPEQALLALQGPQAVQTFARLVP-EAADLVFMT 180
Query: 374 SR----PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
R P I TR+GYTGEDG+EISV + LLS +V+ GLGARD+
Sbjct: 181 GRWMDVPVEGGAIRIFATRSGYTGEDGLEISVSAADAQRLARLLLSLPEVEPIGLGARDT 240
Query: 430 L 430
L
Sbjct: 241 L 241
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIKSG--VSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA +I +QI R+R G P+R G E+ A+ + G ++SG +PS
Sbjct: 280 AGGFPGAEVILAQIDQPNLAPRRRIGLIGLDRTPVREGTELLAADGRLAGRVSSGSFAPS 339
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AM Y+ ++ L+ +VR + V +++ MPFV Y+
Sbjct: 340 AGGPVAMAYVAAEFAVPAGTLYAQVRGRAVPMQLQPMPFVPHRYW 384
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR----PCTIAGIPCTLTRAGYTGEDGVE 523
E+ L+A+QGP + R + + L FMT R P I TR+GYTGEDG+E
Sbjct: 151 EQALLALQGPQAVQTFARLVP-EAADLVFMTGRWMDVPVEGGAIRIFATRSGYTGEDGLE 209
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
ISV + LLS +V+ GLGARD+L
Sbjct: 210 ISVSAADAQRLARLLLSLPEVEPIGLGARDTL 241
>gi|78042904|ref|YP_359347.1| glycine cleavage system T protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|123576895|sp|Q3AET7.1|GCST_CARHZ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|77995019|gb|ABB13918.1| glycine cleavage system T protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 360
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 128/234 (54%), Gaps = 10/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ H+ G KMVPF G+ MPVQY I H+ R+ V +FDVSHM + +TGK
Sbjct: 5 KRTPLYEEHIKLGAKMVPFGGWEMPVQY--TGILEEHMAVRTDVGMFDVSHMGEIEITGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E ++ + DV L+ G + GG DDL+ K + LV NA+ + D
Sbjct: 63 QAERFVNYLITNDVSRLNSGDVIYTTMCYPDGGTVDDLLAYKYSTERYLLVVNAANK--D 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
DL Q R+ D+ + LS +E IA+QGP + ILQ+ T DL+ + +
Sbjct: 121 KDLAHILQYRWD----DVTVTDLS-DETAEIALQGPRAQEILQKLTAFDLNQIKYFGFAE 175
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+PC ++R GYTGEDG EI T I LL + VK AGLGARD+L
Sbjct: 176 IEVAGVPCLVSRTGYTGEDGFEIYFAPNLATKIWNELL-NLGVKPAGLGARDTL 228
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 398 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITLNTPV-PHG-------SLKLSN 449
EI + G+Q V L++++ +L SGD+ T P G + K S
Sbjct: 56 EIEITGKQAERFVNYLITNDVSRLN--------SGDVIYTTMCYPDGGTVDDLLAYKYST 107
Query: 450 DRF----KSLGKDIHLQFLS------------PEERGLIAVQGPLSSTILQRHTDLDLSS 493
+R+ + KD L + +E IA+QGP + ILQ+ T DL+
Sbjct: 108 ERYLLVVNAANKDKDLAHILQYRWDDVTVTDLSDETAEIALQGPRAQEILQKLTAFDLNQ 167
Query: 494 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 553
+ + +AG+PC ++R GYTGEDG EI T I LL + VK AGLGARD
Sbjct: 168 IKYFGFAEIEVAGVPCLVSRTGYTGEDGFEIYFAPNLATKIWNELL-NLGVKPAGLGARD 226
Query: 554 SL 555
+L
Sbjct: 227 TL 228
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + +Q +G+ RK G G I R GYEI N + VG +TSG +P LKKN+
Sbjct: 263 FIGKEALLAQKNAGLKRKIVGLEMIGAGIPRQGYEIV-FNQRGVGFVTSGTFAPFLKKNL 321
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
AM ++ +++G E+ V +R K V +V PF K
Sbjct: 322 AMAMVDLEAAEIGTEVDVIIRGKGVRARVISRPFYK 357
>gi|254420083|ref|ZP_05033807.1| glycine cleavage system T protein [Brevundimonas sp. BAL3]
gi|196186260|gb|EDX81236.1| glycine cleavage system T protein [Brevundimonas sp. BAL3]
Length = 370
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 124/236 (52%), Gaps = 12/236 (5%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A + TPL H + G +MV F G+ MPVQY V A H TR +FDVSHM Q +T
Sbjct: 5 ALKTTPLNAAHRALGARMVGFGGYDMPVQYEGV--LAEHRWTREHAGLFDVSHMGQCKIT 62
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
G+ E D L GK SL N+ GGI DDL+ + D LF+V NA +
Sbjct: 63 GEDATAQFERFVPGDYEILKAGKQKYSLLLNKDGGIIDDLMAGRPDHDGLFVVVNAGNKD 122
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
D A +L D L L +R LIA+QGP ++ ++ H + L+ + FM
Sbjct: 123 EDFAFWSA------NLEGDAKLTVL---DRALIAIQGPETAEVMAAHEPI-LAEMGFMEC 172
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP +Q + +L D VK GLGARDSL
Sbjct: 173 ARLMLFGVDCYVSRSGYTGEDGYEISVPADQAERVWNTILEDARVKPIGLGARDSL 228
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSGCP 71
K R+E F GA I ++ G SR R G G P R G EI +A+ +G +TSG P
Sbjct: 258 KSRKERADFNGADRILKELADGPSRIRIGLIVKEGAPAREGAEIADADGNVIGKVTSGGP 317
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SP+L KNIAMG++ PAY+ +G EL V VR K +V MPFV YY PK
Sbjct: 318 SPTLGKNIAMGFVPPAYAALGTELKVVVRGKSAAAEVVAMPFVAQRYYRKPK 369
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP ++ ++ H + L+ + FM + G+ C ++R+GYTGEDG EISVP
Sbjct: 142 DRALIAIQGPETAEVMAAHEPI-LAEMGFMECARLMLFGVDCYVSRSGYTGEDGYEISVP 200
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+Q + +L D VK GLGARDSL
Sbjct: 201 ADQAERVWNTILEDARVKPIGLGARDSL 228
>gi|359784391|ref|ZP_09287563.1| glycine cleavage system protein T (aminomethyltransferase)
[Halomonas sp. GFAJ-1]
gi|359298351|gb|EHK62567.1| glycine cleavage system protein T (aminomethyltransferase)
[Halomonas sp. GFAJ-1]
Length = 370
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 135/234 (57%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
TPL+ LH G KM PFAG+ MPVQY + + H HTR + +FDVSHM Q +V+GK
Sbjct: 5 NHTPLHALHTKLGAKMAPFAGYDMPVQY-PLGVKKEHEHTRQRCGLFDVSHMGQILVSGK 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ LE++ AD+ L G+ LFT+ GGI DDL+ D +LV NA+ + D
Sbjct: 64 DVAKALETLIPADLVGLKKGEQRYGLFTSTDGGIIDDLMAVNA-GDHFYLVVNAACKDQD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A R +LG ++ L +RGL+A+QGP + ++ R + L FM
Sbjct: 123 I-----AHLR-TNLGATHEIEVL---DRGLLALQGPEARDVMARLCP-EACELTFMQHGR 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+AG ++R+GYTGEDG EISV E C + E LL++ +V+ GLGARDSL
Sbjct: 173 FTLAGQDVWISRSGYTGEDGFEISVSREGCEALAEQLLAEPEVEAIGLGARDSL 226
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+RGL+A+QGP + ++ R + L FM T+AG ++R+GYTGEDG EISV
Sbjct: 140 DRGLLALQGPEARDVMARLCP-EACELTFMQHGRFTLAGQDVWISRSGYTGEDGFEISVS 198
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E C + E LL++ +V+ GLGARDSL
Sbjct: 199 REGCEALAEQLLAEPEVEAIGLGARDSL 226
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 3 IYSRLLIFPGKRRRETG----GFPGASIIQSQIKSGVS-RKRTGFTSTG-VPIRPGYEIF 56
+ + L+ GK RR G GFPGA +I Q+ + RKR G + G P+R G +
Sbjct: 246 VEAGLIWAIGKPRRHGGERSAGFPGADLILHQVDAKDHVRKRVGLVAEGRAPVREGSVLV 305
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+ +G +TSG PS+ K +A+GY++ + ++ VR K++ + VT PF+K
Sbjct: 306 DEAGNEIGVVTSGGFGPSVGKPVALGYVKREWEAAESVVYALVRGKQLPMVVTAPPFIKP 365
Query: 117 NYY 119
YY
Sbjct: 366 GYY 368
>gi|259417719|ref|ZP_05741638.1| glycine cleavage system T protein [Silicibacter sp. TrichCH4B]
gi|259346625|gb|EEW58439.1| glycine cleavage system T protein [Silicibacter sp. TrichCH4B]
Length = 374
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 133/235 (56%), Gaps = 14/235 (5%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL +LH S G KMVPFAG+SMPVQY + I H HTR K +FDVSHM Q ++ G+
Sbjct: 7 TPLTELHESLGAKMVPFAGYSMPVQY-PLGIMKEHTHTREKAGLFDVSHMGQVILRGESY 65
Query: 259 E---EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
E E + DV L G+ LFTN+ GGI+DDL+ D LF+V NA+ +
Sbjct: 66 EAVANAFEKLVPMDVLGLSEGRQRYGLFTNDAGGIEDDLMFANR-GDHLFVVVNAACKDA 124
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
D+ M AA L +I ++ ++ +R L+A+QGP + L+ ++++ FM
Sbjct: 125 DIARMKAA------LEPEISVEPVT--DRALVALQGPAAEAALEALVP-GVAAMKFMDVA 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
AG ++R+GYTGEDG EISVP ALL DV+ GLGARDSL
Sbjct: 176 TFDYAGAELWISRSGYTGEDGYEISVPEAVAAQFASALLEQPDVEAIGLGARDSL 230
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA + + + SRKR G G P+R G ++ A + +G ITSG P+
Sbjct: 269 AGGFPGADAVFADLGGNASRKRVGLKPEGRAPMREGVVLYAAAEGGAPIGTITSGGFGPT 328
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ ++ + +++ +R KRV V V K+PFV +N+
Sbjct: 329 VGGPVAMGYVTAEHAALETQIFGELRGKRVPVTVAKLPFVAANF 372
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + L+ ++++ FM AG ++R+GYTGEDG EISVP
Sbjct: 144 DRALVALQGPAAEAALEALVP-GVAAMKFMDVATFDYAGAELWISRSGYTGEDGYEISVP 202
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
ALL DV+ GLGARDSL
Sbjct: 203 EAVAAQFASALLEQPDVEAIGLGARDSL 230
>gi|344275814|ref|XP_003409706.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 3
[Loxodonta africana]
Length = 347
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 114/182 (62%), Gaps = 4/182 (2%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIV T E L++VSN
Sbjct: 30 QTKIFGCDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVINTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A D+ LM +++G D+ L+ + + L+A+QGP ++ +LQ DL L
Sbjct: 90 AGCWDKDLALMQDKVRELQNMGNDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRKL 146
Query: 370 YFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
FMTS + G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARD
Sbjct: 147 PFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLAMALLENPEVKLAGLAARD 206
Query: 429 SL 430
SL
Sbjct: 207 SL 208
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 67/109 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I + +G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAEVIVPQLKGKVQRRRVGLMCEGPPMRAHSPILSTEGTVIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G + V VR KR V+KMPFV + YYT
Sbjct: 297 SPSLKKNVAMGYVPSQYSQPGTLVLVEVRRKRQAAVVSKMPFVPTTYYT 345
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNMGNDVGLEVV---DNALLALQGPTAAQVLQAGVTDDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLAMALLENPEVKLAGLAARDSL 208
>gi|426400521|ref|YP_007019493.1| glycine cleavage system T protein [Candidatus Endolissoclinum
patella L2]
gi|425857189|gb|AFX98225.1| glycine cleavage system T protein [Candidatus Endolissoclinum
patella L2]
Length = 365
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 132/232 (56%), Gaps = 13/232 (5%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH G MV F + MP+Q+ + + H HTR+K +FDVSHM Q + GK R
Sbjct: 9 TPLNHLHRELGATMVAFVDYDMPMQF-PLGVLKEHRHTRAKAGLFDVSHMGQVQIYGKDR 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ E++ ++ L+ G + FTN GGI DDLI+T + D LF+V NA+ ++ D+
Sbjct: 68 AKIFETLVPGNIRGLNRGCMRYTQFTNSNGGILDDLIITNAV-DHLFVVVNAACKEQDIA 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+M +A G+ + + + R L+A+QGP++ +L ++L FMT
Sbjct: 127 IMESA------FGEGLKI----LDNRALLALQGPIAVNVLVNLAP-KAANLTFMTGASMD 175
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C +TR+GYTGEDG EISVP E + LL+ +V+ GLGARDSL
Sbjct: 176 VGGFHCFVTRSGYTGEDGYEISVPAENAECLARELLNYTEVEAIGLGARDSL 227
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQ 61
+ + LL GK RR+ FPGAS IQ +I G R+R G + G + R G +I + N
Sbjct: 247 VEASLLWSIGKHRRKNADFPGASRIQKEIIEGTLRQRVGIKTKGPALARRGCKILDENGN 306
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+G ITSGC PS++ +AMGY+ Y+ +++ +RD V + K+PF+ Y
Sbjct: 307 IIGKITSGCFGPSVQSPVAMGYVVREYAAANTVVFLMIRDNLVPANIVKLPFITPGY 363
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+ R L+A+QGP++ +L ++L FMT + G C +TR+GYTGEDG EISV
Sbjct: 140 DNRALLALQGPIAVNVLVNLAP-KAANLTFMTGASMDVGGFHCFVTRSGYTGEDGYEISV 198
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + LL+ +V+ GLGARDSL
Sbjct: 199 PAENAECLARELLNYTEVEAIGLGARDSL 227
>gi|390475046|ref|XP_003734892.1| PREDICTED: aminomethyltransferase, mitochondrial [Callithrix
jacchus]
Length = 306
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 113/173 (65%), Gaps = 10/173 (5%)
Query: 262 LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMV 321
+ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D+ LM
Sbjct: 1 MESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDLALM- 59
Query: 322 AAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 60 --QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAVME 114
Query: 379 IAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL D +VKLAGL ARDSL
Sbjct: 115 VFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLQDPEVKLAGLAARDSL 167
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 196 GKRRRAAMDFPGAKVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNMEGTMIGTVTSGCP 255
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 256 SPSLKKNVAMGYVPCEYSRPGTKLMVEVRRKQQMAVVSKMPFVPTNYYT 304
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 56 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 112
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL D +VKLAGL ARDSL
Sbjct: 113 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLQDPEVKLAGLAARDSL 167
>gi|386287802|ref|ZP_10064973.1| glycine cleavage system T protein [gamma proteobacterium BDW918]
gi|385279312|gb|EIF43253.1| glycine cleavage system T protein [gamma proteobacterium BDW918]
Length = 372
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 133/232 (57%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
T L LH G KMVPFAG+ MPVQY + + HL R+ +FDVSHM Q + G++
Sbjct: 9 TALNALHRELGAKMVPFAGYDMPVQY-PMGVMKEHLQVRNAAGLFDVSHMGQIRLRGENI 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE++ DV L + L TNEQGGI+DDL+ DS LV NA+ + D
Sbjct: 68 AQALEALMPQDVLGLPLDRQRYGLLTNEQGGIRDDLMFANC-GDSFMLVVNAACKDQDYA 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ ++L + I ++ L ++GL+A+QGP + ++ R +++ FM + C
Sbjct: 127 WL------RQNLPESISMEMLV--DQGLLALQGPAARQVMARLAPAS-ANMVFMDTLSCQ 177
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AGI C L+ +GYTGEDG EISV + LL++++V+ GLGARDSL
Sbjct: 178 VAGIECWLSCSGYTGEDGFEISVAAADAEKLARLLLAEDEVEFIGLGARDSL 229
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
++L + I ++ L ++GL+A+QGP + ++ R +++ FM + C +AGI C L+
Sbjct: 130 QNLPESISMEMLV--DQGLLALQGPAARQVMARLAPAS-ANMVFMDTLSCQVAGIECWLS 186
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISV + LL++++V+ GLGARDSL
Sbjct: 187 CSGYTGEDGFEISVAAADAEKLARLLLAEDEVEFIGLGARDSL 229
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSG 69
PG+ R G +PGA++I Q+ G + KR G P+R G EI NA +G ++SG
Sbjct: 263 PGEAR--AGNYPGAAVIAKQLVEGTAEKRVLLDVEGRAPVREGVEIVNAEGSVLGRVSSG 320
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PS+ + I M Y+ G L+ VR K + + + K PFV+ YY
Sbjct: 321 GFGPSIGRPIVMAYVATKALSQGEALYASVRGKLLPLTLRKSPFVEQRYY 370
>gi|302922374|ref|XP_003053452.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734393|gb|EEU47739.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 432
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 143/253 (56%), Gaps = 25/253 (9%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYDLH++ GGK+VPFAG+S+PVQY +++ SH TR+ S+FDVSHM+Q + GK
Sbjct: 41 KKTPLYDLHVAKGGKLVPFAGYSLPVQYSDLTLAQSHHWTRNHASLFDVSHMVQHIFKGK 100
Query: 257 HREEWLESICVADV--HELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
+LE + +D H L K T L+ GGI DD +VT+ ED ++V+N +
Sbjct: 101 DAAAFLEKVTPSDWANHGLMQSKLTTFLWPG-SGGIVDDSVVTRLGEDEYYVVTNGACLD 159
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYFM 372
D + G D+ Q+ + GL+A+QGP S+ +L TD++L LYF
Sbjct: 160 KDTKYF---DEELGKFGGDV--QWTRLDNSGLVALQGPQSAEVLSEVLATDINLKELYFG 214
Query: 373 TSRPCTIAGI------PCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLSD---E 417
+ + P ++R GYTGEDG EIS G E + +EALL+ E
Sbjct: 215 NAVYGELKLADGSKTHPVLISRGGYTGEDGFEISFNGKEYPAFETTSPAIEALLAKAGPE 274
Query: 418 DVKLAGLGARDSL 430
++LAGLG+RDSL
Sbjct: 275 RLQLAGLGSRDSL 287
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I P + RR++GGF GA +I Q+ SGV+R+R G G P R G EI + N ++
Sbjct: 314 IIP-QARRQSGGFHGAEVILPQLTPKSKGGSGVARRRVGLVVQGAPAREGAEI-HQNGEK 371
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G ITSG PSP+L KNIAMGYI+ K G E+ V VR K+ VTKMPFV + Y+
Sbjct: 372 IGTITSGVPSPTLSKNIAMGYIKNGQHKAGTEVDVVVRGKKRPGVVTKMPFVPTKYW 428
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 19/127 (14%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCT 503
K ++ G D+ Q+ + GL+A+QGP S+ +L TD++L LYF +
Sbjct: 163 KYFDEELGKFGGDV--QWTRLDNSGLVALQGPQSAEVLSEVLATDINLKELYFGNAVYGE 220
Query: 504 IAGI------PCTLTRAGYTGEDGVEISVPG------EQCTHIVEALLSD---EDVKLAG 548
+ P ++R GYTGEDG EIS G E + +EALL+ E ++LAG
Sbjct: 221 LKLADGSKTHPVLISRGGYTGEDGFEISFNGKEYPAFETTSPAIEALLAKAGPERLQLAG 280
Query: 549 LGARDSL 555
LG+RDSL
Sbjct: 281 LGSRDSL 287
>gi|449305291|gb|EMD01298.1| hypothetical protein BAUCODRAFT_118996 [Baudoinia compniacensis
UAMH 10762]
Length = 389
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 138/239 (57%), Gaps = 21/239 (8%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPF G+SMPVQY + + SH+ TR K S+FDV HM+Q V G E +LES+ AD+
Sbjct: 1 MVPFGGYSMPVQYSDLGVGESHIWTREKCSLFDVGHMVQYHVEGPGAEAFLESLTPADLK 60
Query: 272 ELDPGKGTLS-LFTNEQGGIQDDLIVTKTLEDS----LFLVSNASRRKVDMDLMVAAQDR 326
L PG+ TLS L GGI DD I+T+ LE ++V NA R+ D + A +
Sbjct: 61 SLPPGQNTLSALLHPVTGGIVDDCIITR-LEAGPRHLFYVVLNAGCREKDYTFLCQAVEN 119
Query: 327 F-KSLGKDIHLQFLS--AEERGLIAVQGPLSSTILQ----RHTDLDLSSLYFMTSRPCTI 379
+ ++ +HL+ L E GLIA+QGPL+++IL+ +DL YF T++ T+
Sbjct: 120 WDNTINPVVHLRHLQHDGEPYGLIALQGPLAASILKSALAETCRVDLQKWYFGTAKHITL 179
Query: 380 A-----GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
A +P +R GYTGEDG E+S+ Q + E LL D+ ++ AGLGARDSL
Sbjct: 180 ALPSAESLPIVASRGGYTGEDGFELSIHPSQVVAVTELLLQRAGDDRLRFAGLGARDSL 238
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 9 IFPGKRR-RETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQ 61
I P RR RE GF GA I Q+ +GV R+R G G P R G + +
Sbjct: 265 IIPKSRRTRERSGFNGAEAIIPQLMPKSEGGTGVKRRRIGLVVDGAPAREGAVVEDGEGN 324
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSGCPSP++KKNIAM Y++ K G EL V VR KR VTKMPFV S Y+
Sbjct: 325 VVGKVTSGCPSPTMKKNIAMAYVQSGLHKAGTELQVVVRAKRRKAVVTKMPFVPSKYW 382
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 14/111 (12%)
Query: 459 IHLQFLS--PEERGLIAVQGPLSSTILQ----RHTDLDLSSLYFMTSRPCTIA-----GI 507
+HL+ L E GLIA+QGPL+++IL+ +DL YF T++ T+A +
Sbjct: 128 VHLRHLQHDGEPYGLIALQGPLAASILKSALAETCRVDLQKWYFGTAKHITLALPSAESL 187
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
P +R GYTGEDG E+S+ Q + E LL D+ ++ AGLGARDSL
Sbjct: 188 PIVASRGGYTGEDGFELSIHPSQVVAVTELLLQRAGDDRLRFAGLGARDSL 238
>gi|121610875|ref|YP_998682.1| glycine cleavage system T protein [Verminephrobacter eiseniae
EF01-2]
gi|121555515|gb|ABM59664.1| glycine cleavage system T protein [Verminephrobacter eiseniae
EF01-2]
Length = 408
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 128/232 (55%), Gaps = 10/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH+ G +MVPFAG+SMPVQY + A HLHTR +FDVSHM Q + G
Sbjct: 43 TPLNALHIELGARMVPFAGYSMPVQY-PTGLIAEHLHTRRAAGLFDVSHMGQLRLLGPAG 101
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E++ DV L GK L +++G I DDL+ D++F++ N + + D+
Sbjct: 102 AAAFETLMPVDVIGLPVGKQRYGLLLSDEGTIIDDLMFFNQGHDAIFVIVNGACKAGDLA 161
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ Q R ++ E+ L+A+QGPL+ T L R + L FMT
Sbjct: 162 HI---QARIAQ-----RCAVVALPEQALLALQGPLAVTALARLAP-GVEKLRFMTGGNYA 212
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG C +TR+GYTGEDG E+S+P Q + ALL+ +V+ GLGAR+SL
Sbjct: 213 VAGCDCLVTRSGYTGEDGFELSLPAAQAERLARALLAQPEVRPIGLGARNSL 264
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 17 ETGGFPGASIIQSQIKSGVS--RKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGCPSP 73
GGFPGA + +QI + S RKR G + GVP+R E+ +++ +++G +TSG P P
Sbjct: 302 RAGGFPGADKVLAQIDNPASLPRKRVGLVALEGVPVREHTELQSSDGRKIGTVTSGLPGP 361
Query: 74 SLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+L + +AMGY+ PA++ G + VR K V ++V MPFV +NY
Sbjct: 362 TLNQPVAMGYVSPAFAAPGTRVQAIVRGKAVPMQVCAMPFVPANY 406
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E+ L+A+QGPL+ T L R + L FMT +AG C +TR+GYTGEDG E+S+P
Sbjct: 178 EQALLALQGPLAVTALARLAP-GVEKLRFMTGGNYAVAGCDCLVTRSGYTGEDGFELSLP 236
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
Q + ALL+ +V+ GLGAR+SL
Sbjct: 237 AAQAERLARALLAQPEVRPIGLGARNSL 264
>gi|115523615|ref|YP_780526.1| glycine cleavage system aminomethyltransferase T [Rhodopseudomonas
palustris BisA53]
gi|115517562|gb|ABJ05546.1| glycine cleavage system T protein [Rhodopseudomonas palustris
BisA53]
Length = 383
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 138/239 (57%), Gaps = 17/239 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ LHL+ GGKMVPFAG+ MPVQ+ A + HLHTR+ +FDVSHM Q V+ K
Sbjct: 13 KQTPLHTLHLARGGKMVPFAGYDMPVQFPA-GVLKEHLHTRAAAGLFDVSHMGQIVLRPK 71
Query: 257 H-----REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
LE + D+ L + + FTN+ GGI DDL+V+ D LFLV NA+
Sbjct: 72 SGRVADAAAALERLLPQDIAALPLHRQRYAQFTNDSGGILDDLMVS-NFGDHLFLVVNAA 130
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
++ D + A L + ++ L +R L+A+QGP + +L + + + L F
Sbjct: 131 CKEADEAHLRA------HLAETCEIEAL---DRALLALQGPKAVAVLAKFCP-EAAGLRF 180
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M S+P ++ G+ C ++R+GYTGEDG EISVP ALL D V GLGARDSL
Sbjct: 181 MDSKPLSVMGLACFVSRSGYTGEDGFEISVPAAAAERFALALLDDAAVMPIGLGARDSL 239
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + +L + + + L FM S+P ++ G+ C ++R+GYTGEDG EISVP
Sbjct: 153 DRALLALQGPKAVAVLAKFCP-EAAGLRFMDSKPLSVMGLACFVSRSGYTGEDGFEISVP 211
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
ALL D V GLGARDSL
Sbjct: 212 AAAAERFALALLDDAAVMPIGLGARDSL 239
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 13 KRRRETG----GFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGA 65
K RR G GF GA +I +Q+ G R R G G P+R G +F A + +G
Sbjct: 269 KSRRSNGERPGGFAGAEVILAQLDHGAPRTRVGLKPEGRAPVREGALLFADEAAAEPIGK 328
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++SG PS+ +AMGY+ +++ ++ VR +R+ V++ FV +Y
Sbjct: 329 VSSGGFGPSVGGPVAMGYLPSQHARHEDMVFAEVRGQRLPVRIGSPVFVSPSY 381
>gi|386360972|ref|YP_006059217.1| glycine cleavage system T protein [Thermus thermophilus JL-18]
gi|383509999|gb|AFH39431.1| glycine cleavage system T protein [Thermus thermophilus JL-18]
Length = 349
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 132/235 (56%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ HL GG+MV FAG+ +P+QY SI HL R VFDVSHM + +V G+
Sbjct: 2 KKTPLYEAHLRLGGRMVDFAGYLLPLQY--TSIVEEHLAVRRAAGVFDVSHMGEFLVRGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ V D +L G+ S+ NE+GG+ DD+ + + E+ +V NA+ D
Sbjct: 60 EALAFLQWATVNDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ ++L K ++ A ER L+A+QGP ++++LQ T+LDLS
Sbjct: 120 L-------AHLQALAKGFRVELEDASERTALLALQGPKAASLLQGLTNLDLSQKRKNDVF 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
P +AG P L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 173 PARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 452 FKSLGKDIHLQFLSPEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
++L K ++ ER L+A+QGP ++++LQ T+LDLS P +AG P
Sbjct: 123 LQALAKGFRVELEDASERTALLALQGPKAASLLQGLTNLDLSQKRKNDVFPARVAGRPAR 182
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 183 LARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 46 GVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE--LWVRVRDKR 103
G+P R GY + + + VG +TSG SP L++ IA+ Y+E G E V VR +
Sbjct: 283 GIP-REGYRVLSGG-RPVGRVTSGGYSPLLQRGIALAYVEE-----GAEGPFQVEVRGRA 335
Query: 104 VDVKVTKMPFV 114
V ++ +PFV
Sbjct: 336 VPAALSPLPFV 346
>gi|418532003|ref|ZP_13097912.1| glycine cleavage system T protein [Comamonas testosteroni ATCC
11996]
gi|371450798|gb|EHN63841.1| glycine cleavage system T protein [Comamonas testosteroni ATCC
11996]
Length = 380
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 128/232 (55%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G +MVPFAG+SMPVQY + A HLHTR +FDVSHM Q ++ G
Sbjct: 15 TPLFALHQKLGARMVPFAGYSMPVQY-PQGLMAEHLHTRKAAGLFDVSHMGQLLLRGPDA 73
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ DV +L K L +EQGGI DDL+ D LFL+ N + ++ D+
Sbjct: 74 AAALESLMPVDVIDLGLHKQRYGLLLDEQGGILDDLMFVNR-GDDLFLIVNGACKEADIT 132
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ + G + + ER L+A+QGP ++ L R ++ L FMT
Sbjct: 133 HIQS--------GIGNRCEVVPLPERALLALQGPQAAAALSRLIP-GVTQLVFMTGNHFD 183
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G +TR+GYTGEDG EIS+PGE +ALL+ +V GLGAR+SL
Sbjct: 184 WQGHALYITRSGYTGEDGFEISLPGEAAEAFAQALLAQPEVAPIGLGARNSL 235
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 19 GGFPGASIIQSQIKS--GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA+I+ Q+++ + RKR G + +P+R + N + Q +G ITSG SP+L
Sbjct: 275 GGFPGAAIVLEQLQNPQSLRRKRVGLIALERIPVREPAVLENMDGQHIGHITSGLLSPTL 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +A+ Y+EP Y+ + E++ VR K V +KV PFV + YY
Sbjct: 335 NQPVALAYVEPDYAAIDTEIFAMVRGKPVPMKVVATPFVPTRYY 378
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGP ++ L R ++ L FMT G +TR+GYTGEDG EIS+P
Sbjct: 149 ERALLALQGPQAAAALSRLIP-GVTQLVFMTGNHFDWQGHALYITRSGYTGEDGFEISLP 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
GE +ALL+ +V GLGAR+SL
Sbjct: 208 GEAAEAFAQALLAQPEVAPIGLGARNSL 235
>gi|225011960|ref|ZP_03702398.1| glycine cleavage system T protein [Flavobacteria bacterium
MS024-2A]
gi|225004463|gb|EEG42435.1| glycine cleavage system T protein [Flavobacteria bacterium
MS024-2A]
Length = 361
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 131/238 (55%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LY+ HL+ KM PF G+ MPVQY + +T HL R+ V VFDVSHM + +V+G
Sbjct: 2 KKTTLYNTHLALNAKMTPFGGYEMPVQY--IGVTKEHLAVRNSVGVFDVSHMGEFLVSGA 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ L+ IC D+ +++ GK + F NE+GGI DDLIV + E LV NAS D
Sbjct: 60 KAFDLLQYICSNDISKINIGKAQYNYFPNEKGGIVDDLIVYRLKETEYLLVVNASNIDKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + F +L ++ +EE L+A+QGP + +Q+ T + L+ L +
Sbjct: 120 WNWVEKHNSNFGALLEN------KSEETALLAIQGPKAIEAMQKLTSIPLAELPYYAHTT 173
Query: 377 CTIAGIPCTL-TRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
T AG TL GYTG G+EI P + I +++ +D ++ AGL ARD+L
Sbjct: 174 ATFAGCENTLIATTGYTGAGGIEIYFPTNKAPEIWASIMKAGADYEITPAGLAARDTL 231
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
+ ETG F + I+ Q K G+S K GF + G+P R GYEI N + +G +TSG S
Sbjct: 260 KFETGTF-NSEILALQKKEGLSEKLVGFLLETRGIP-RSGYEIVNREGKIIGTVTSGTQS 317
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
P L + I +GY++ YSK G E+ +R+RDK + K+PF+K
Sbjct: 318 PILSQGIGLGYVKLEYSKPGSEIAIRIRDKDCPAIIIKLPFIK 360
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL-TRAGYTGEDGVEIS 525
EE L+A+QGP + +Q+ T + L+ L + T AG TL GYTG G+EI
Sbjct: 139 EETALLAIQGPKAIEAMQKLTSIPLAELPYYAHTTATFAGCENTLIATTGYTGAGGIEIY 198
Query: 526 VPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
P + I +++ +D ++ AGL ARD+L
Sbjct: 199 FPTNKAPEIWASIMKAGADYEITPAGLAARDTL 231
>gi|262277446|ref|ZP_06055239.1| glycine cleavage system T protein [alpha proteobacterium HIMB114]
gi|262224549|gb|EEY75008.1| glycine cleavage system T protein [alpha proteobacterium HIMB114]
Length = 369
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 133/244 (54%), Gaps = 17/244 (6%)
Query: 192 SPSAEQ----RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S +AE+ +T LYD H+S GGKMVPFAG+ MPVQY I HLH R+ +FDVSH
Sbjct: 2 SQNAEKITDLKTALYDFHVSVGGKMVPFAGYQMPVQY-PEGIMKEHLHVRANAGIFDVSH 60
Query: 248 MLQTVVTGKHREEW-LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
M Q + G E LE I D+ L+ + ++ N+ GGI DDLIVTK +E L +
Sbjct: 61 MGQFSIYGTEEEYLPLEKIVPIDLKSLNNNQSKYTVLMNKDGGIDDDLIVTK-IEGGLNI 119
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
V NA+ + D+ + D K+ +H E+ LIA+QGP + IL +
Sbjct: 120 VLNAACKHHDIKRIHEVIDPSKT---KLH------EDLSLIAIQGPKAVEILNNIIP-GV 169
Query: 367 SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
S+L FM +TR+GYTGEDG E+S+ + LL D +VKL GLGA
Sbjct: 170 SALTFMNGSKFKFNNEDIYVTRSGYTGEDGFEVSIKNSLAEKFCKTLLDDHNVKLIGLGA 229
Query: 427 RDSL 430
RDSL
Sbjct: 230 RDSL 233
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
K+ +E G F GASI++ QIK+G +KR G R G ++F D+ +G +TSG
Sbjct: 263 KKNKEEGNFLGASIVKDQIKNGALKKRVGIKPEKTIAREGSKVFKG-DKEIGVVTSGGFG 321
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PS+ +AMGY+ +S G +L + VR KR K+ KMPF K +Y
Sbjct: 322 PSVNGPVAMGYVLKEFSNEGEDLELEVRGKRHAAKIFKMPFYKKSY 367
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 433 DITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLS 492
+I LN H +K ++ +H E+ LIA+QGP + IL +S
Sbjct: 118 NIVLNAACKHHDIKRIHEVIDPSKTKLH------EDLSLIAIQGPKAVEILNNIIP-GVS 170
Query: 493 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 552
+L FM +TR+GYTGEDG E+S+ + LL D +VKL GLGAR
Sbjct: 171 ALTFMNGSKFKFNNEDIYVTRSGYTGEDGFEVSIKNSLAEKFCKTLLDDHNVKLIGLGAR 230
Query: 553 DSL 555
DSL
Sbjct: 231 DSL 233
>gi|71409827|ref|XP_807238.1| glycine cleavage T-protein [Trypanosoma cruzi strain CL Brener]
gi|70871196|gb|EAN85387.1| glycine cleavage T-protein, putative [Trypanosoma cruzi]
Length = 373
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 136/241 (56%), Gaps = 10/241 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L+ LHLS +M PFAG+ MP+ Y + HLHTR +FDVSH+ V G
Sbjct: 6 RRTVLHSLHLSRKARMGPFAGYDMPIHYQP-GVVQEHLHTRQAAGLFDVSHVGFFEVWGA 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R ++ E + + V EL G+ L+LF NE GG++DD IV+K + L +++ + K+
Sbjct: 65 DRHKFFEWVTPSGVTELQDGQSALTLFMNESGGVKDDCIVSKYSDHLLAVINAGCKGKII 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS-R 375
L +DR D L L +R ++++QGP +++++ + +L + FM R
Sbjct: 125 THL----KDRLAEFKGDATLVEL---DRAMVSLQGPKAASVMAPFVE-ELDRVKFMWGRR 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
+ GI TLTR Y+GEDG +I VP + VE LL + DV+LAGLGARDSL +
Sbjct: 177 SVCVKGIDITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQNPDVQLAGLGARDSLRTEAG 236
Query: 436 L 436
L
Sbjct: 237 L 237
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 449 NDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR-PCTIAGI 507
DR D L L +R ++++QGP +++++ + +L + FM R + GI
Sbjct: 128 KDRLAEFKGDATLVEL---DRAMVSLQGPKAASVMAPFVE-ELDRVKFMWGRRSVCVKGI 183
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TLTR Y+GEDG +I VP + VE LL + DV+LAGLGARDSL
Sbjct: 184 DITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQNPDVQLAGLGARDSL 231
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQS---QIKSGVSRKRTGFTST--GVPIRPGYEIFN 57
+ +RL+ KRR GGF G +Q+ + K V R R G S G R G I
Sbjct: 251 VAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKELVPRLRMGILSVARGPVARTGMPIL- 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D VG +TSG PSP+L +NIA+GYI+ A ++ G + + VR KR+ +VT FV
Sbjct: 310 VGDVVVGEVTSGVPSPTLSRNIAIGYIDRAKARAGETVELEVRGKRLPGEVTLPRFVPQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
>gi|221507757|gb|EEE33344.1| aminomethyltransferase, putative [Toxoplasma gondii VEG]
Length = 867
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 141/247 (57%), Gaps = 7/247 (2%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
SA + +PL+++H S G K V F G +P Y + +SHLHTR+ S+FD++ +
Sbjct: 452 SAVRPSPLHEVHASLGAKFVKFHGLLLPFAYEGEGVVSSHLHTRTCASLFDLAFRQHYRI 511
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G + ++LE + V D+ L + +LFTNEQGGI+DD+IV D L ++ NA +
Sbjct: 512 RGDNAAQFLERLVVGDIQSLLETESRFTLFTNEQGGIEDDVIVA-VHRDFLLIIGNACNK 570
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL---DLSSLY 370
+ + A + G+ + ++ + E+ L++VQGP + ++ + +L DL +
Sbjct: 571 SKILSRLDAEAAEARGRGQAVTVE--AVEDYTLLSVQGPQAMDVMSQAVNLSNADLVRMP 628
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED-VKLAGLGARDS 429
FM+S C++ G+ C LTR G++GEDG EIS+P + T I LL ++ AG+GARD+
Sbjct: 629 FMSSYLCSVEGVACVLTRCGFSGEDGFEISLPASEATRIFSILLEKSSLLRPAGVGARDT 688
Query: 430 LSGDITL 436
L + L
Sbjct: 689 LRQEAGL 695
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDL---DLSSLYFMTSRPC 502
+L + ++ G+ + + E+ L++VQGP + ++ + +L DL + FM+S C
Sbjct: 576 RLDAEAAEARGRGQAVTVEAVEDYTLLSVQGPQAMDVMSQAVNLSNADLVRMPFMSSYLC 635
Query: 503 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED-VKLAGLGARDSL 555
++ G+ C LTR G++GEDG EIS+P + T I LL ++ AG+GARD+L
Sbjct: 636 SVEGVACVLTRCGFSGEDGFEISLPASEATRIFSILLEKSSLLRPAGVGARDTL 689
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 48/153 (31%)
Query: 12 GKRRRETGGFPGASIIQ----------SQIKSG-------------------------VS 36
G+RRR+ FPGA+ I +Q + G +
Sbjct: 718 GRRRRQEANFPGAARILAQLAQQQLLQNQTRKGPGSVDALQKALAAEAEKAGLREENRLR 777
Query: 37 RKRTGF-------TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYS 89
RKR G +S GV +R + VG +TS C +PSL++ I M Y++ Y+
Sbjct: 778 RKRVGLCLPAGGGSSKGVTVR------EEGGKNVGIVTSSCFAPSLQRTIGMAYLDLPYT 831
Query: 90 KVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
+ + + +V +MPF+ YY P
Sbjct: 832 LPKTRVVLDTNLPTPEAQVCQMPFLPGAYYKVP 864
>gi|221483265|gb|EEE21584.1| aminomethyltransferase, putative [Toxoplasma gondii GT1]
Length = 867
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 141/247 (57%), Gaps = 7/247 (2%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
SA + +PL+++H S G K V F G +P Y + +SHLHTR+ S+FD++ +
Sbjct: 452 SAVRPSPLHEVHASLGAKFVKFHGLLLPFAYEGEGVVSSHLHTRTCASLFDLAFRQHYRI 511
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G + ++LE + V D+ L + +LFTNEQGGI+DD+IV D L ++ NA +
Sbjct: 512 RGDNAAQFLERLVVGDIQSLLETESRFTLFTNEQGGIEDDVIVA-VHRDFLLIIGNACNK 570
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL---DLSSLY 370
+ + A + G+ + ++ + E+ L++VQGP + ++ + +L DL +
Sbjct: 571 SKILSRLDAEAAEARGRGQAVTVE--AVEDYTLLSVQGPQAMDVMSQAVNLSNADLVRMP 628
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED-VKLAGLGARDS 429
FM+S C++ G+ C LTR G++GEDG EIS+P + T I LL ++ AG+GARD+
Sbjct: 629 FMSSYLCSVEGVACVLTRCGFSGEDGFEISLPASEATRIFSILLEKSSLLRPAGVGARDT 688
Query: 430 LSGDITL 436
L + L
Sbjct: 689 LRQEAGL 695
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDL---DLSSLYFMTSRPC 502
+L + ++ G+ + + E+ L++VQGP + ++ + +L DL + FM+S C
Sbjct: 576 RLDAEAAEARGRGQAVTVEAVEDYTLLSVQGPQAMDVMSQAVNLSNADLVRMPFMSSYLC 635
Query: 503 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED-VKLAGLGARDSL 555
++ G+ C LTR G++GEDG EIS+P + T I LL ++ AG+GARD+L
Sbjct: 636 SVEGVACVLTRCGFSGEDGFEISLPASEATRIFSILLEKSSLLRPAGVGARDTL 689
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 48/153 (31%)
Query: 12 GKRRRETGGFPGASIIQ----------SQIKSG-------------------------VS 36
G+RRR+ FPGA+ I +Q + G +
Sbjct: 718 GRRRRQEANFPGAARILAQLAQQQLLQNQTRKGPGSVDALQKALAAEAEKAGLREENRLR 777
Query: 37 RKRTGF-------TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYS 89
RKR G +S GV +R + VG +TS C +PSL++ I M Y++ Y+
Sbjct: 778 RKRVGLCLPAGGGSSKGVTVR------EEGGKNVGIVTSSCFAPSLQRTIGMAYLDLPYT 831
Query: 90 KVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
+ + + +V +MPF+ YY P
Sbjct: 832 LPKTRVVLDTNLPTPEAQVCQMPFLPGAYYKVP 864
>gi|384439179|ref|YP_005653903.1| aminomethyltransferase [Thermus sp. CCB_US3_UF1]
gi|359290312|gb|AEV15829.1| Aminomethyltransferase [Thermus sp. CCB_US3_UF1]
Length = 349
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 129/234 (55%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ HL HGG+MV FAG+++P+QY SI HL R VFDVSHM + +V G+
Sbjct: 2 KRTPLYEAHLRHGGRMVAFAGYALPLQY--TSIVEEHLAVRRGAGVFDVSHMGEFLVRGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ D +L G+ S+ N QGG+ DD+ + + E + LV NA+ D
Sbjct: 60 EALAFLQWATANDASKLRVGRAQYSMLLNAQGGVVDDIYLYRLEEAAYLLVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ F+ + L+ LS E L+A+QGP ++ ILQ T+ DLS
Sbjct: 120 WAHLQGLAQGFR-----VELEDLS-EGTALLALQGPKAAEILQGLTEADLSKKRKNDVFA 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG P L R GYTGEDG E+ + E + EALL+ V AGLGARD+L
Sbjct: 174 AQVAGRPARLARTGYTGEDGFELFLAPEDAEAVFEALLAAGAVP-AGLGARDTL 226
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
G + L+ LS E L+A+QGP ++ ILQ T+ DLS +AG P L R G
Sbjct: 129 GFRVELEDLS-EGTALLALQGPKAAEILQGLTEADLSKKRKNDVFAAQVAGRPARLARTG 187
Query: 516 YTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
YTGEDG E+ + E + EALL+ V AGLGARD+L
Sbjct: 188 YTGEDGFELFLAPEDAEAVFEALLAAGAVP-AGLGARDTL 226
>gi|407399782|gb|EKF28425.1| glycine synthase, putative [Trypanosoma cruzi marinkellei]
Length = 373
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 134/241 (55%), Gaps = 10/241 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L+ LHLS +M FAG+ MP+ Y + HLHTR +FDVSH+ V G
Sbjct: 6 RRTVLHSLHLSRKARMGSFAGYDMPIHYPP-GVVQEHLHTRQAAGLFDVSHVGFFEVRGA 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R ++ E + + V EL G+ L+LF NE GG++DD IV+K D L V NA +
Sbjct: 65 DRHKFFEWVTPSGVTELQEGQSALTLFMNESGGVKDDCIVSK-YSDHLLAVINAGCKG-- 121
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS-R 375
+M +DR D L L +R ++++QGP +++++ + +L + FM R
Sbjct: 122 -KIMTHLKDRLAEFKGDATLVEL---DRAMVSLQGPKAASVMAPFVE-ELDKVKFMWGRR 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
+ GI TLTR Y+GEDG +I VP E VE LL + DV+LAGLGARDSL +
Sbjct: 177 SVCVKGIDITLTRCSYSGEDGFDIIVPIEDAVQFVELLLQNSDVQLAGLGARDSLRTEAG 236
Query: 436 L 436
L
Sbjct: 237 L 237
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 449 NDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR-PCTIAGI 507
DR D L L +R ++++QGP +++++ + +L + FM R + GI
Sbjct: 128 KDRLAEFKGDATLVEL---DRAMVSLQGPKAASVMAPFVE-ELDKVKFMWGRRSVCVKGI 183
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TLTR Y+GEDG +I VP E VE LL + DV+LAGLGARDSL
Sbjct: 184 DITLTRCSYSGEDGFDIIVPIEDAVQFVELLLQNSDVQLAGLGARDSL 231
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQS---QIKSGVSRKRTGFTST--GVPIRPGYEIFN 57
+ +RL+ KRR GGF G +Q+ + K V R R G S G R G I
Sbjct: 251 VAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKELVPRLRMGILSVARGPVARTGMPILV 310
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
+D VG +TSG PSP+L +NIAMGYI+ A ++ G ++ + VR KR+ +VT FV
Sbjct: 311 GDDV-VGEVTSGVPSPTLSRNIAMGYIDRAKARAGEKVELDVRGKRLPGEVTLPRFVTQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
>gi|342186060|emb|CCC95545.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 375
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 138/243 (56%), Gaps = 11/243 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L+ HLS +M PFAG+ MP+ Y A ++ HLHTR S+FDVSH + G
Sbjct: 6 KRTALHAFHLSRRARMAPFAGYDMPINYEAGAVR-EHLHTREAASIFDVSHFGVVELRGA 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE + E + + L G+ L++F NE G++DD IVTK +D L +V NA ++
Sbjct: 65 DRERFFEWLTPSAPSRLAVGRAALTMFLNEHAGVKDDCIVTK-YDDYLAVVVNAGCKQKM 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M A FK D+ L+ +ER ++ +QGP ++ L + + +L L FM R
Sbjct: 124 IAYMQEACANFKG---DVGLEM---QERAIVTLQGPKAAEALAPYVE-NLDKLLFMHGRT 176
Query: 377 -CTIAGIPC-TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDI 434
+ G+ TLTR Y+GEDG +I + E T +VE LL + DV++AGLGARD+L +
Sbjct: 177 DVKVCGVTARTLTRCSYSGEDGFDIVMRDEDVTPMVELLLQNPDVQVAGLGARDTLRTEA 236
Query: 435 TLN 437
LN
Sbjct: 237 GLN 239
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 464 LSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP-CTIAGIPC-TLTRAGYTGEDG 521
L +ER ++ +QGP ++ L + + +L L FM R + G+ TLTR Y+GEDG
Sbjct: 140 LEMQERAIVTLQGPKAAEALAPYVE-NLDKLLFMHGRTDVKVCGVTARTLTRCSYSGEDG 198
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+I + E T +VE LL + DV++AGLGARD+L
Sbjct: 199 FDIVMRDEDVTPMVELLLQNPDVQVAGLGARDTL 232
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQI---KSGVSRKRTGFTST---GVPIRPGYEIF 56
+ +R + K R GGF G + +++ + KS + R R G + G R G +
Sbjct: 252 VAARCMWCVPKHRMAEGGFVGHARLKALVEDAKSLIPRLRVGMLAAPERGPIPRAGTSVL 311
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+ VG +TSG PSPSL +NIA+GY++ AY +G ++ + +R KRV +V FV
Sbjct: 312 -VEGKVVGVVTSGVPSPSLGRNIALGYVDRAYVSLGQKVELDIRGKRVQAEVVNPCFVAP 370
Query: 117 NYY 119
YY
Sbjct: 371 RYY 373
>gi|336425659|ref|ZP_08605678.1| glycine cleavage system T protein [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336011781|gb|EGN41722.1| glycine cleavage system T protein [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 366
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 132/242 (54%), Gaps = 11/242 (4%)
Query: 193 PSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTV 252
P E RT LYD H+ +GGKMVPFAGF +PVQY + H+ R+ +FDVSHM + +
Sbjct: 2 PMEECRTSLYDTHVKYGGKMVPFAGFLLPVQYEKTGVIKEHMAVRTGCGLFDVSHMGEIL 61
Query: 253 VTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
G+ L + D + G+ S N +GG+ DDLIV K E+ F+V NA+
Sbjct: 62 CEGEGVLANLNDLLTNDFTGMYDGQARYSPMCNGEGGVVDDLIVYKIRENRYFIVVNAAN 121
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-HTDLDLSSLYF 371
++ D + M+A Q R ++ DI + G IA+QGPL+ IL R + + Y+
Sbjct: 122 KEKDFEWMLAHQ-REGAIFTDISPKV------GQIALQGPLAQRILSRVSAEESIPGRYY 174
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARD 428
AGI C ++R GYTGEDG E+ + E+ + EAL+ ++ + GLGARD
Sbjct: 175 SCVAEGKAAGIECLISRTGYTGEDGFELYMDSEKAPALWEALMEAGKEDGLTPCGLGARD 234
Query: 429 SL 430
+L
Sbjct: 235 TL 236
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 470 GLIAVQGPLSSTILQR-HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
G IA+QGPL+ IL R + + Y+ AGI C ++R GYTGEDG E+ +
Sbjct: 147 GQIALQGPLAQRILSRVSAEESIPGRYYSCVAEGKAAGIECLISRTGYTGEDGFELYMDS 206
Query: 529 EQCTHIVEALLS---DEDVKLAGLGARDSL 555
E+ + EAL+ ++ + GLGARD+L
Sbjct: 207 EKAPALWEALMEAGKEDGLTPCGLGARDTL 236
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 10 FPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITS 68
F GK E G P +RKR G TG I R G +I+ D+R+G TS
Sbjct: 271 FIGKEALEKAGNP-------------TRKRVGLKVTGRGIIREGADIY-IGDERIGKSTS 316
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
G +P L +AM ++ + VG + VR +RV+ +V ++PF K
Sbjct: 317 GTHAPYLGYPVAMALVQAEKADVGSRVEADVRGRRVEAEVVELPFYK 363
>gi|402835711|ref|ZP_10884274.1| aminomethyltransferase [Mogibacterium sp. CM50]
gi|402273993|gb|EJU23183.1| aminomethyltransferase [Mogibacterium sp. CM50]
Length = 362
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 133/240 (55%), Gaps = 14/240 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
+++TPLYD H+ +GGK+V F GF++PVQY + I H+ R+ +FDVSHM + +V+G
Sbjct: 2 DKKTPLYDTHVKYGGKIVSFGGFALPVQYES-GIKQEHMAVRTACGLFDVSHMGEIIVSG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
++L I D +L + S NE GG DDLIV K E+ F+V NA R
Sbjct: 61 PKAVDFLNYILTNDFTDLKVDQARYSPMCNEHGGTVDDLIVYKRGENDYFVVVNAGNRDS 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSA-EERGLIAVQGPLSSTILQRHTDLDL-SSLYFMT 373
D MV R ++ ++A E+ G +A+QGP + IL + D L + Y+
Sbjct: 121 DFAWMV--DHRIDG------VELVNASEDWGQLALQGPKAEAILAKVADPALIPAGYYTA 172
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+ I GIPC L+R GYTGEDG EI + ++ I E L+ D+ + GLGARD+L
Sbjct: 173 NFDAEIKGIPCILSRTGYTGEDGFEIYMAADKAADIWEILIEAGKDDGLLPCGLGARDTL 232
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDL-SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVE 523
+ E+ G +A+QGP + IL + D L + Y+ + I GIPC L+R GYTGEDG E
Sbjct: 138 ASEDWGQLALQGPKAEAILAKVADPALIPAGYYTANFDAEIKGIPCILSRTGYTGEDGFE 197
Query: 524 ISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
I + ++ I E L+ D+ + GLGARD+L
Sbjct: 198 IYMAADKAADIWEILIEAGKDDGLLPCGLGARDTL 232
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIA 80
F G + I++ V R T G+ IR +++ + +++G ITSG P L +
Sbjct: 267 FIGKAAIEAATPLKVRRVGIKVTGRGI-IREECDVYR-DGEKIGYITSGTFLPYLGGSYG 324
Query: 81 MGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
M + ++G + V VR + VD ++ K+PF K
Sbjct: 325 MAIVNSDKREIGAAVQVDVRSRMVDAEMVKLPFYK 359
>gi|365093572|ref|ZP_09330636.1| glycine cleavage system T protein [Acidovorax sp. NO-1]
gi|363414259|gb|EHL21410.1| glycine cleavage system T protein [Acidovorax sp. NO-1]
Length = 381
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 140/271 (51%), Gaps = 23/271 (8%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH G +MVPFAG+SMPVQY A + A H+HTR+ +FDVSHM Q + G
Sbjct: 11 TPLNALHTELGARMVPFAGYSMPVQYPA-GLMAEHVHTRTAAGLFDVSHMGQLKLVGPDA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTL----EDSLFLVSNASRRK 314
E++ DV +L GK L ++G + DDL+ E +LF++ N + +
Sbjct: 70 AAAFETLMPVDVIDLPVGKQRYGLLLTDEGTVMDDLMFFNQGVVDGEPTLFVIVNGACKV 129
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
D+ + Q R K + + + GL+A+QGP ++T L R + L FMT
Sbjct: 130 GDIAHI---QARIGQRCKVVPM-----PDHGLLALQGPQAATALARLAP-GVEKLVFMTG 180
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL---- 430
+IAG C +TR+GYTGEDG EISVP Q + ALL+ +VK GLGAR+SL
Sbjct: 181 GAFSIAGCDCFVTRSGYTGEDGFEISVPAAQAETLARALLAQPEVKPIGLGARNSLRLEA 240
Query: 431 -----SGDITLNTPVPHGSLKLSNDRFKSLG 456
DI T P L + + + G
Sbjct: 241 GLCLYGNDIDTTTTPPEAGLNWAIQKVRRTG 271
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+ GL+A+QGP ++T L R + L FMT +IAG C +TR+GYTGEDG EISVP
Sbjct: 150 DHGLLALQGPQAATALARLAP-GVEKLVFMTGGAFSIAGCDCFVTRSGYTGEDGFEISVP 208
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
Q + ALL+ +VK GLGAR+SL
Sbjct: 209 AAQAETLARALLAQPEVKPIGLGARNSL 236
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIKSGVS--RKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +QI + S RKR G + VP+R E+ + + Q++G +TSG P+
Sbjct: 275 AGGFPGADKVLAQIDNPASLQRKRVGLVALERVPVREHTELQSTDGQKIGEVTSGLLGPT 334
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ + +AMGY+ PA++ +G + VR K V ++V +PFV +NY+
Sbjct: 335 VNEPVAMGYVTPAFAAIGTRVNAIVRGKAVPMEVRALPFVPANYF 379
>gi|326795437|ref|YP_004313257.1| glycine cleavage system protein T [Marinomonas mediterranea MMB-1]
gi|326546201|gb|ADZ91421.1| glycine cleavage system T protein [Marinomonas mediterranea MMB-1]
Length = 364
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 133/234 (56%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD H+ +MV FAG+ MPVQY + + HL R +FDVSHM Q +++G+
Sbjct: 2 KRTPLYDAHIDAQARMVEFAGYQMPVQY-PLGVKKEHLWVRENAGLFDVSHMGQVIISGE 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ ++ LESI DV L S FT +GGI DDL+ + D +F+V NA+ + D
Sbjct: 61 NAKQELESILPVDVLGLSLNTQRYSFFTTPEGGISDDLMFSN-WGDQVFMVVNAACKVQD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + AQ + S+ + E+R L+A+QGP + + +L+S+ FM S
Sbjct: 120 IAYL-KAQLKTSSV--------VEIEDRALLALQGPKARQAAKALIP-ELASMVFMQSIK 169
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
GI ++ +GYTGEDG EISVP Q + AL S E+V+ GLGARDSL
Sbjct: 170 VEWQGIELWVSCSGYTGEDGYEISVPANQAILLASALTSMEEVEWIGLGARDSL 223
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKK 77
GGF G+ +I Q + RKR GF + P+R G EI N ++ VG +TSG +PSL +
Sbjct: 263 GGFVGSEVILPQFGQTLDRKRVGFVVESKAPVREGVEIVNEANEPVGTVTSGGFAPSLGQ 322
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
I M Y+ A + L+ VR K++ + TKMPFV + +Y
Sbjct: 323 PIVMAYVNTA--DLNTPLFALVRGKQLPLTQTKMPFVPARFY 362
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + + +L+S+ FM S GI ++ +GYTGEDG EISV
Sbjct: 136 EDRALLALQGPKARQAAKALIP-ELASMVFMQSIKVEWQGIELWVSCSGYTGEDGYEISV 194
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P Q + AL S E+V+ GLGARDSL
Sbjct: 195 PANQAILLASALTSMEEVEWIGLGARDSL 223
>gi|239816273|ref|YP_002945183.1| glycine cleavage system T protein [Variovorax paradoxus S110]
gi|239802850|gb|ACS19917.1| glycine cleavage system T protein [Variovorax paradoxus S110]
Length = 392
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 132/233 (56%), Gaps = 10/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLY LH+ G +MVPFAG+SMPVQY A + A H HTR+ +FD+SHM Q + G
Sbjct: 15 KTPLYGLHVELGARMVPFAGYSMPVQYPA-GLMAEHRHTRNAAGLFDISHMGQLRLVGPD 73
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E++ DV +L PGK L N++GGI DDL+ S+F++ N + + D+
Sbjct: 74 AAAAFETLMPVDVIDLAPGKQRYGLLLNDEGGILDDLMFFNEGHGSIFVIVNGACKVADI 133
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + +G +Q + + L+A+QGP ++ +L R + + FMT
Sbjct: 134 AHIQ------QKIGARCDVQPMP--DHALLALQGPQAAAVLARLSP-GIERFVFMTGGAV 184
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GIP TR+GYTGEDG EISV G+ + LL+ +V+ GLGAR+SL
Sbjct: 185 QIGGIPAFATRSGYTGEDGFEISVAGQNAEALARLLLAQPEVEPIGLGARNSL 237
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+ L+A+QGP ++ +L R + + FMT I GIP TR+GYTGEDG EISV
Sbjct: 151 DHALLALQGPQAAAVLARLSP-GIERFVFMTGGAVQIGGIPAFATRSGYTGEDGFEISVA 209
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
G+ + LL+ +V+ GLGAR+SL
Sbjct: 210 GQNAEALARLLLAQPEVEPIGLGARNSL 237
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 13/114 (11%)
Query: 19 GGFPGASIIQSQIKSG------------VSRKRTGFTSTG-VPIRPGYEIFNANDQRVGA 65
GGFPGA+ + +Q+ + + RKR G + VP+R G + + + +G
Sbjct: 277 GGFPGAARVLAQLAAATAGAAGHTDHDTLKRKRVGLVALERVPVRDGTVLQSFEGKDIGF 336
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+TSG P+ + IAMGY+ AYS+ G + VR K V ++V+ +PFV + YY
Sbjct: 337 VTSGLLGPTADRPIAMGYVATAYSEPGTRVQAIVRGKPVPMEVSTLPFVPTRYY 390
>gi|326936022|ref|XP_003214058.1| PREDICTED: aminomethyltransferase, mitochondrial-like, partial
[Meleagris gallopavo]
Length = 205
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 113/179 (63%), Gaps = 4/179 (2%)
Query: 253 VTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
V G+ R +LES+ V D+ EL PG+GTL+L TNE GGI DDLIVT T+ED L++VSNA
Sbjct: 2 VYGRDRVRFLESLVVGDIAELLPGQGTLTLLTNECGGIVDDLIVTNTVEDHLYVVSNAGC 61
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
D +M ++ G D+HL+ + L+A+QGP + +LQ DL+ L FM
Sbjct: 62 ADKDRAVMEGRAAELRAAGSDVHLEV---SDNALLALQGPSMAQVLQAGLPDDLTKLTFM 118
Query: 373 TSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
TS T+ G+P C +TR GYTGEDGVEISVP + + E LL +V AGL ARDSL
Sbjct: 119 TSTATTVFGVPGCRVTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDSL 177
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 451 RFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-C 509
++ G D+HL+ + L+A+QGP + +LQ DL+ L FMTS T+ G+P C
Sbjct: 75 ELRAAGSDVHLEV---SDNALLALQGPSMAQVLQAGLPDDLTKLTFMTSTATTVFGVPGC 131
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + + E LL +V AGL ARDSL
Sbjct: 132 RVTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDSL 177
>gi|357404375|ref|YP_004916299.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Methylomicrobium
alcaliphilum 20Z]
gi|351717040|emb|CCE22705.1| glycine cleavage complex protein T, aminomethyltransferase,
tetrahydrofolate-dependent [Methylomicrobium
alcaliphilum 20Z]
Length = 374
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 134/234 (57%), Gaps = 11/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+T LY LH+ G KMVPFA + MP+QY I HLH R++ S+FD+SHM Q ++ G
Sbjct: 16 HKTALYGLHVELGAKMVPFADYQMPLQYSK-GIIHEHLHCRNQASLFDISHMGQCLLKGS 74
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LE + A + L G+ ++ TN GGI DD++VT+ L L +V NA+ ++ D
Sbjct: 75 SAAVGLEKLTPAIISRLGSGRQQYTVLTNSDGGIIDDIVVTR-LGQELTIVVNAACKEKD 133
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ K L D LQ L+ E L+A+QGP +S +LQ+ + L FM +
Sbjct: 134 FKHL------RKQLINDCQLQELT--EHTLLALQGPSASHVLQQIAP-EACRLQFMQACR 184
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I IPC ++R+GYTGEDG EIS+P + LL+ +V+ AGLGARD+L
Sbjct: 185 TEIDDIPCMISRSGYTGEDGFEISLPNRFAEKLARMLLNFPEVEPAGLGARDTL 238
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K L D LQ L+ E L+A+QGP +S +LQ+ + L FM + I IPC ++
Sbjct: 139 KQLINDCQLQELT--EHTLLALQGPSASHVLQQIAP-EACRLQFMQACRTEIDDIPCMIS 195
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EIS+P + LL+ +V+ AGLGARD+L
Sbjct: 196 RSGYTGEDGFEISLPNRFAEKLARMLLNFPEVEPAGLGARDTL 238
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
+PGA + +Q+++G +R G +P+R ++F++ D+ +G +TSG SPSL + I
Sbjct: 273 YPGAGTLLNQMQNGTEIQRVGLLVEAKMPVRENAQVFDSEDKLIGRVTSGSFSPSLGRPI 332
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
A+ I + +G L+ RVR+ + + V +PFV Y+
Sbjct: 333 ALALINTEAAVIGATLFTRVRNNLIKLTVCDLPFVPHRYH 372
>gi|443472504|ref|ZP_21062531.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas pseudoalcaligenes KF707]
gi|442902926|gb|ELS28360.1| Aminomethyltransferase (glycine cleavage system T protein)
[Pseudomonas pseudoalcaligenes KF707]
Length = 373
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 138/233 (59%), Gaps = 10/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ LHL G +MVPFAG+ MPVQY + + HLHTR + +FDVSHM Q ++ G+H
Sbjct: 8 KTPLHALHLELGARMVPFAGYDMPVQY-PLGVLKEHLHTREQAGLFDVSHMGQIILRGEH 66
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ +L G +LFT++ GGI DDL+V D L LV NA+ + D+
Sbjct: 67 AARALETLVPVDILDLPVGTQRYALFTDDNGGILDDLMVANA-GDHLVLVVNAACKDQDL 125
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ +G ++ L E R L+A+QGP ++ +L R ++ ++ FM
Sbjct: 126 AHLQ------THIGDQCEIESLF-ESRALLALQGPAAAEVLGRLAP-EVKNMTFMQFGSV 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G C ++R+GYTGEDG EISVP Q + ALL+ +V+ GLGARDSL
Sbjct: 178 RLEGAECYVSRSGYTGEDGYEISVPVAQAEALARALLAQPEVQPIGLGARDSL 230
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
G FPGA + +Q + GV+ KR G VP+R G EI +A +G +TSG PSL
Sbjct: 269 AGNFPGAGQVFAQQRDGVAEKRVGLLPQERVPVREGAEIVDAEGAVIGRVTSGGFGPSLG 328
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AMGY+ A++ + E+W VR KRV +KV K PFV YY
Sbjct: 329 APVAMGYLASAHAALDTEVWALVRGKRVAMKVAKTPFVPQRYY 371
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E R L+A+QGP ++ +L R ++ ++ FM + G C ++R+GYTGEDG EISV
Sbjct: 143 ESRALLALQGPAAAEVLGRLAP-EVKNMTFMQFGSVRLEGAECYVSRSGYTGEDGYEISV 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P Q + ALL+ +V+ GLGARDSL
Sbjct: 202 PVAQAEALARALLAQPEVQPIGLGARDSL 230
>gi|166032436|ref|ZP_02235265.1| hypothetical protein DORFOR_02151 [Dorea formicigenerans ATCC
27755]
gi|166028159|gb|EDR46916.1| aminomethyltransferase [Dorea formicigenerans ATCC 27755]
Length = 363
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 133/240 (55%), Gaps = 14/240 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLY H+ GGK+VPFAG+ +PVQYG IT H+ R K +FDVSHM + + G
Sbjct: 2 ELKTPLYGAHVKAGGKIVPFAGYLLPVQYGTGVIT-EHMAVREKAGLFDVSHMGEVLCQG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
K L+ + D + G+ S NE GG DDLIV K ++ F+V NA+ +
Sbjct: 61 KDALANLQKLLTNDFTNMVDGQARYSPMCNENGGTVDDLIVYKRGDNDYFIVVNAANKDK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSA-EERGLIAVQGPLSSTILQRHT-DLDLSSLYFMT 373
D M+ Q G+ + F A E G IA+QGP + IL++ T + ++ Y+
Sbjct: 121 DYQWMLDHQ-----FGE---VTFTDASSEYGQIALQGPKAMEILKKLTAEENIPKKYYHA 172
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+AGIPC +++ GYTGEDGVE+ + E + +ALL DE + GLGARD+L
Sbjct: 173 VFDTEVAGIPCIISKTGYTGEDGVELYLASENAEKMWDALLEAGKDEGLIPCGLGARDTL 232
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 468 ERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G IA+QGP + IL++ T + ++ Y+ +AGIPC +++ GYTGEDGVE+ +
Sbjct: 141 EYGQIALQGPKAMEILKKLTAEENIPKKYYHAVFDTEVAGIPCIISKTGYTGEDGVELYL 200
Query: 527 PGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
E + +ALL DE + GLGARD+L
Sbjct: 201 ASENAEKMWDALLEAGKDEGLIPCGLGARDTL 232
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 39 RTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVR 98
R G TG I ++ ++++G TSG P L IAM ++ ++G ++ V
Sbjct: 284 RIGLKVTGRGIIREHQDIYVGEKKIGHTTSGTHCPFLGYPIAMALVDAGSVEIGNKVEVD 343
Query: 99 VRDKRVDVKVTKMPFVK 115
VR ++V+ +V +PF K
Sbjct: 344 VRGRKVEAEVIALPFYK 360
>gi|418937641|ref|ZP_13491259.1| glycine cleavage system T protein [Rhizobium sp. PDO1-076]
gi|375055685|gb|EHS51927.1| glycine cleavage system T protein [Rhizobium sp. PDO1-076]
Length = 379
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 134/246 (54%), Gaps = 24/246 (9%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A +RTPLYDLHLS GGKMVPFAG+ MPVQY A + HL TRS +FDVSHM Q ++
Sbjct: 5 TALKRTPLYDLHLSLGGKMVPFAGYDMPVQYPA-GVLKEHLFTRSDAGLFDVSHMGQVLL 63
Query: 254 T---GKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
T GK + L E++ D+ L PG+ FTN+ GGI DDL++T D L +V
Sbjct: 64 TPKSGKVEDAALALETLVPVDILGLKPGRQRYGFFTNDSGGILDDLMITNR-GDHLLVVV 122
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAV----QGPLSSTILQRHTDL 364
NA+ + D+ M A HL E QGP + ++L
Sbjct: 123 NAACKDADVAHMKA------------HLSDTCTVELLDDRALLALQGPRAESVLGELW-A 169
Query: 365 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
+S + FM R + + C ++R+GY+GEDG EISVP + + +ALLS GL
Sbjct: 170 GVSGMKFMDVREIPLLDVDCIVSRSGYSGEDGFEISVPNHKAVALAKALLSHPHCAPIGL 229
Query: 425 GARDSL 430
GARDSL
Sbjct: 230 GARDSL 235
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSL 75
GGFPGA I ++++GVSR+R G G P+R ++F + R +G + SG P++
Sbjct: 275 GGFPGADRIIGELENGVSRRRVGLKPEGKAPVRTHVKLFADAEGRTEIGEVASGTFGPTV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AM + ++ G ++ VR K + + V +PFV Y
Sbjct: 335 EGPVAMAMLPIPHTAAGTRIFAEVRGKYLPLTVADLPFVTPTY 377
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 475 QGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHI 534
QGP + ++L +S + FM R + + C ++R+GY+GEDG EISVP + +
Sbjct: 156 QGPRAESVLGELW-AGVSGMKFMDVREIPLLDVDCIVSRSGYSGEDGFEISVPNHKAVAL 214
Query: 535 VEALLSDEDVKLAGLGARDSL 555
+ALLS GLGARDSL
Sbjct: 215 AKALLSHPHCAPIGLGARDSL 235
>gi|124266626|ref|YP_001020630.1| aminomethyltransferase [Methylibium petroleiphilum PM1]
gi|124259401|gb|ABM94395.1| aminomethyltransferase [Methylibium petroleiphilum PM1]
Length = 381
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 133/235 (56%), Gaps = 14/235 (5%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G KMVPFAG+ MPV Y + I A H R ++FDVSHM Q +
Sbjct: 15 TPLHALHRELGAKMVPFAGYDMPVNYPS-GILAEHRQCRDAAALFDVSHMGQIRLVADDL 73
Query: 259 EEW---LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
++ LE++ DV L GK + FTN GG+ DDL+VT+ E+ L L+ NA+ +
Sbjct: 74 QQAALALETLVPMDVLGLGVGKQRYAFFTNAGGGLLDDLMVTRR-ENDLLLIVNAACKDT 132
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
D+ + A +G +Q L ER L+A+QGP + T L R + +S+L FMT
Sbjct: 133 DLHHLQA------HIGHRCTVQPLP--ERALLALQGPKAVTALAR-LNPGVSALTFMTGG 183
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G C LTR+GYTGEDG EISVP + LL+ +V AGLGARD+L
Sbjct: 184 AFTLVGSDCYLTRSGYTGEDGFEISVPATHAEALARELLAQPEVAPAGLGARDTL 238
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGP + T L R + +S+L FMT T+ G C LTR+GYTGEDG EISVP
Sbjct: 152 ERALLALQGPKAVTALAR-LNPGVSALTFMTGGAFTLVGSDCYLTRSGYTGEDGFEISVP 210
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ LL+ +V AGLGARD+L
Sbjct: 211 ATHAEALARELLAQPEVAPAGLGARDTL 238
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
+PGA++I +Q+ GVS +R G VP+R G E+ ++ R+G +TSG P++ + I
Sbjct: 280 YPGATVIDAQLAGGVSERRVGLIGLERVPVREGTELVDSQGHRIGRVTSGTLGPTVNQPI 339
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
AM I ++ V E++ VR KR+ ++V +PF Y
Sbjct: 340 AMACIASNHATVSHEVFAMVRGKRLPMRVVALPFTPHRY 378
>gi|254440329|ref|ZP_05053823.1| glycine cleavage system T protein [Octadecabacter antarcticus 307]
gi|198255775|gb|EDY80089.1| glycine cleavage system T protein [Octadecabacter antarcticus 307]
Length = 373
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 128/235 (54%), Gaps = 15/235 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+DL++ G KMVPFAG++MPVQY + + H+HTR K +FDVSHM Q ++ G
Sbjct: 7 TPLHDLNVELGAKMVPFAGYAMPVQY-PMGVLQEHIHTREKAGLFDVSHMGQVIIKGDDY 65
Query: 259 EEW---LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
LE++ D+ L + FTN+ GGI DDL+V D +F+V NA+ +
Sbjct: 66 AVAALALETLVPVDILGLQQDRQRYGFFTNDAGGIMDDLMVANR-GDHIFVVVNAACKPA 124
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
D+ M A D + +R L+A+QGP + +L + + + FM
Sbjct: 125 DIAHMKAKLD---------GVTVTEITDRALLALQGPAAEAVLTA-LNPKAADMRFMDVA 174
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ C ++R+GYTGEDG EISVP Q + LLS +DV GLGARDSL
Sbjct: 175 TLMLGDAECWISRSGYTGEDGYEISVPAAQAVDLARHLLSHDDVAAIGLGARDSL 229
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 13 KRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQR-VGA 65
K RR GGFPGA ++ ++ +G KR G G P+R G +F N D+ +G
Sbjct: 259 KARRTGGARAGGFPGADVVLAEFTNGAPTKRVGLKPEGRAPMREGVVLFANTEDEVPIGE 318
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
ITSG P++ +AMGY+ A + G ++ +R KR+ + VTK+PF +N+
Sbjct: 319 ITSGGFGPTIGGPMAMGYVGTAQAVEGTVIYGELRGKRLPLTVTKLPFTPANF 371
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + +L + + + FM + C ++R+GYTGEDG EISVP
Sbjct: 143 DRALLALQGPAAEAVLTA-LNPKAADMRFMDVATLMLGDAECWISRSGYTGEDGYEISVP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
Q + LLS +DV GLGARDSL
Sbjct: 202 AAQAVDLARHLLSHDDVAAIGLGARDSL 229
>gi|346307394|ref|ZP_08849531.1| glycine cleavage system T protein [Dorea formicigenerans
4_6_53AFAA]
gi|345906118|gb|EGX75850.1| glycine cleavage system T protein [Dorea formicigenerans
4_6_53AFAA]
Length = 363
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 134/240 (55%), Gaps = 14/240 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLYD H+ GGK+VPFAG+ +PVQYG IT H+ R K +FDVSHM + + G
Sbjct: 2 ELKTPLYDAHVKAGGKIVPFAGYLLPVQYGTGVIT-EHMAVREKAGLFDVSHMGEVLCQG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
K L+ + D + G+ S NE GG DDLIV K ++ F+V NA+ +
Sbjct: 61 KDALANLQKLLTNDFTNMVDGQARYSPMCNENGGTFDDLIVYKRGDNDYFIVVNAANKDK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHT-DLDLSSLYFMT 373
D M+ Q G+ + F A + G IA+QGP + IL++ T + ++ Y+
Sbjct: 121 DYQWMLDHQ-----FGE---VTFTDASSQYGQIALQGPKAMEILKKLTAEENIPKKYYHA 172
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+AGIPC +++ GYTGEDGVE+ + E + +ALL D+ + GLGARD+L
Sbjct: 173 VFDTEVAGIPCIISKTGYTGEDGVELYLASENAEKMWDALLEAGKDDGLIPCGLGARDTL 232
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 468 ERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+ G IA+QGP + IL++ T + ++ Y+ +AGIPC +++ GYTGEDGVE+ +
Sbjct: 141 QYGQIALQGPKAMEILKKLTAEENIPKKYYHAVFDTEVAGIPCIISKTGYTGEDGVELYL 200
Query: 527 PGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
E + +ALL D+ + GLGARD+L
Sbjct: 201 ASENAEKMWDALLEAGKDDGLIPCGLGARDTL 232
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 39 RTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVR 98
R G TG I ++ ++++G TSG P L IAM ++ ++G ++ V
Sbjct: 284 RIGLKVTGRGIIREHQDIYIGEKKIGHTTSGTHCPFLGYPIAMALVDAGSVEIGNKVEVD 343
Query: 99 VRDKRVDVKVTKMPFVK 115
VR ++V+ +V +PF K
Sbjct: 344 VRGRKVEAEVIALPFYK 360
>gi|351728633|ref|ZP_08946324.1| glycine cleavage system T protein [Acidovorax radicis N35]
Length = 414
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 137/267 (51%), Gaps = 19/267 (7%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH+ G +MVPFAG+SMPVQY A + A H HTRS +FDVSHM Q + G
Sbjct: 48 TPLNALHIELGARMVPFAGYSMPVQYPA-GLMAEHQHTRSAAGLFDVSHMGQLKLVGPDA 106
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E++ DV +L GK L ++G + DDL+ LF++ N + + D+
Sbjct: 107 AAAFETLMPVDVIDLSVGKQRYGLLLTDEGTVIDDLMFFNKGNHELFVIVNGACKVGDIA 166
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A +G+ ++ + L+A+QGP + T L R + L FMT
Sbjct: 167 HIQA------RIGQRCNV--IPMPNHALLALQGPQAVTALARLAP-GVEKLIFMTGGDFA 217
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL-------- 430
IAG C +TR+GYTGEDG EISVP Q + ALL+ +VK GLGAR+SL
Sbjct: 218 IAGCDCFVTRSGYTGEDGFEISVPAAQADTLARALLAQPEVKPIGLGARNSLRLEAGLCL 277
Query: 431 -SGDITLNTPVPHGSLKLSNDRFKSLG 456
DI T P +L + + + G
Sbjct: 278 YGNDIDTTTTPPEAALNWAIQKVRRTG 304
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIK--SGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +QI + + RKR G + VP+R E+ + + Q++G +TSG P+
Sbjct: 308 AGGFPGADKVLAQIDNPATLQRKRVGLVALERVPVREHTELQSTDGQKIGEVTSGLLGPT 367
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ + +AMGY+ PA++ +G + VR K V ++V MPFV +NY+
Sbjct: 368 VNEPVAMGYVAPAFAAMGTRVNAIVRGKAVPMEVRAMPFVPANYF 412
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
L+A+QGP + T L R + L FMT IAG C +TR+GYTGEDG EISVP Q
Sbjct: 186 LLALQGPQAVTALARLAP-GVEKLIFMTGGDFAIAGCDCFVTRSGYTGEDGFEISVPAAQ 244
Query: 531 CTHIVEALLSDEDVKLAGLGARDSL 555
+ ALL+ +VK GLGAR+SL
Sbjct: 245 ADTLARALLAQPEVKPIGLGARNSL 269
>gi|402820383|ref|ZP_10869950.1| hypothetical protein IMCC14465_11840 [alpha proteobacterium
IMCC14465]
gi|402511126|gb|EJW21388.1| hypothetical protein IMCC14465_11840 [alpha proteobacterium
IMCC14465]
Length = 395
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 134/238 (56%), Gaps = 18/238 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLY++HL+ G KMVPFAG+ MPVQYG + + HLHTR K +FDVSHM Q + ++
Sbjct: 30 RTPLYEMHLALGAKMVPFAGYEMPVQYG-LGVMGEHLHTREKAGLFDVSHMGQAQLFPEN 88
Query: 258 REE----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+ E++ + L G + TNE GGI DDL+VT+ ++L+LV NA+ +
Sbjct: 89 ADSDVAPVFEALVPGGIISLKEGGIRYTQLTNEAGGILDDLMVTR-FGNTLWLVVNAACK 147
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQF-LSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
D F + + + + LS E R L+A+QGP + +L++H + L FM
Sbjct: 148 N----------DDFAHIAQSLAGKARLSVENRALLALQGPQAEDVLKQHLPA-AADLAFM 196
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G ++R GYTGEDG EIS+P + LL ++ V+ GLGARDSL
Sbjct: 197 QACHADYQGENVIISRCGYTGEDGFEISLPNDMAARFAAHLLENDAVEPIGLGARDSL 254
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
+RRRE+ FPGA + Q+ +R R G G P R G EI + ++ +G ITSG
Sbjct: 284 RRRRESLDFPGAHKVSQQLSQKPARLRVGIRPEGRAPAREGTEIHDMDNNPIGRITSGGF 343
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+P+L+ IAMGY+ ++ G ++ + +R K + +T MPFV+ NY
Sbjct: 344 APTLQAPIAMGYVNADHAAAGTQIQLIIRGKPMMAHITSMPFVEHNY 390
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 449 NDRFKSLGKDIHLQF-LSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI 507
ND F + + + + LS E R L+A+QGP + +L++H + L FM + G
Sbjct: 148 NDDFAHIAQSLAGKARLSVENRALLALQGPQAEDVLKQHLPA-AADLAFMQACHADYQGE 206
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
++R GYTGEDG EIS+P + LL ++ V+ GLGARDSL
Sbjct: 207 NVIISRCGYTGEDGFEISLPNDMAARFAAHLLENDAVEPIGLGARDSL 254
>gi|340777749|ref|ZP_08697692.1| glycine cleavage system protein T [Acetobacter aceti NBRC 14818]
Length = 377
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 16/238 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTV---VT 254
+TPL+ LH +G +MVPFAG++MP+QY A I A H HTR+ +FDVSHM Q +
Sbjct: 7 QTPLFSLHEEYGARMVPFAGYAMPLQY-ADGIMAEHQHTRTHAGLFDVSHMGQVALRPID 65
Query: 255 GKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
G L E I DV L G+ TN+ GGI DDL++ + +V NA+
Sbjct: 66 GDMNRVALALERIVPVDVLGLKAGRQRYGFLTNDAGGILDDLMIVN-MGTWFLVVVNAAC 124
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D+ LM + L D ++ L +R L+A+QGP + T L R ++++ FM
Sbjct: 125 KAQDIALMQ------RELSSDCTVEPLP--DRALLALQGPEAETALARIAPA-VTTMKFM 175
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
++ T+ G+ +TR+GYTGEDG EISVP ++ + LL+ +VK GLGARDSL
Sbjct: 176 DAKAVTLDGVEAIVTRSGYTGEDGFEISVPADKAEQVARNLLAQPEVKPIGLGARDSL 233
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA +I +Q++ G SR+R G + G P+R G E+F ++ +G +TSG P+
Sbjct: 272 AGGFPGADLILAQLEQGASRRRVGLLAEGRAPVRHGAELFAESEGGSPIGVVTSGAFGPT 331
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L+ +AMGY+E A++ VG +++ +R +R+ V V MPFV +
Sbjct: 332 LQAPVAMGYVETAFAPVGTKVFAELRGRRIPVTVAAMPFVPVGF 375
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + T L R ++++ FM ++ T+ G+ +TR+GYTGEDG EISVP
Sbjct: 147 DRALLALQGPEAETALARIAPA-VTTMKFMDAKAVTLDGVEAIVTRSGYTGEDGFEISVP 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL+ +VK GLGARDSL
Sbjct: 206 ADKAEQVARNLLAQPEVKPIGLGARDSL 233
>gi|453330112|dbj|GAC87835.1| glycine cleavage system protein T [Gluconobacter thailandicus NBRC
3255]
Length = 377
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/240 (42%), Positives = 134/240 (55%), Gaps = 18/240 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
QRTPL+ L+L G KMVPFAG+ MP+QY A + A HLHTRSK +FDVSHM Q +
Sbjct: 6 QRTPLHALNLEFGAKMVPFAGYEMPLQYPA-GLMAEHLHTRSKAGLFDVSHMGQIRIAAR 64
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G R+ L ES+ AD L G+ TN+ GI DDL+V + D LF+V NAS
Sbjct: 65 SGDVRDAALALESLIPADYAGLAKGRQRYGFLTNDAAGILDDLMVA-NMGDDLFVVVNAS 123
Query: 312 RRKVDMDLMVAA-QDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
++ D L+ AA DR + QF +R L+A+QGP + + + +
Sbjct: 124 CKEQDAALIEAALSDRCV-----VTRQF----DRALMALQGPQAQDAIAPLCPA-AADMR 173
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM +AG+P TL+R+GYTGEDG EI + ALL+ V GLGARDSL
Sbjct: 174 FMDVIETELAGVPVTLSRSGYTGEDGYEIGCAAADAETVARALLAQPQVLPIGLGARDSL 233
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 13 KRRRE----TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQR-VGA 65
K RRE GG+PGA I+ Q + GVSRKR G + G P+R G ++F +A Q+ +G
Sbjct: 263 KARREGGSREGGYPGAEIVLRQAREGVSRKRVGLMAEGRAPVRAGAKLFADAEGQKEIGL 322
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG P+++ +AMGY+ Y+ L+ +R K V V V MPFV +
Sbjct: 323 VTSGAFGPTVQAPVAMGYVATDYADKDTALFAELRGKFVPVHVRAMPFVAPGF 375
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + + + + FM +AG+P TL+R+GYTGEDG EI
Sbjct: 147 DRALMALQGPQAQDAIAPLCPA-AADMRFMDVIETELAGVPVTLSRSGYTGEDGYEIGCA 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ ALL+ V GLGARDSL
Sbjct: 206 AADAETVARALLAQPQVLPIGLGARDSL 233
>gi|88704858|ref|ZP_01102571.1| Glycine cleavage T protein (aminomethyl transferase)
[Congregibacter litoralis KT71]
gi|88701179|gb|EAQ98285.1| Glycine cleavage T protein (aminomethyl transferase)
[Congregibacter litoralis KT71]
Length = 370
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 131/237 (55%), Gaps = 16/237 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPL LH G +MVPFAG+ MPVQY I A H HTR + +FDVSHM Q ++ G
Sbjct: 4 KHTPLDGLHRELGARMVPFAGYDMPVQY-RDGIIAEHRHTRERAGLFDVSHMGQFILEGP 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LES+ D+ L + + +L TN++GG++DDLI+T+ D+ FLV NA+ + D
Sbjct: 63 GITTTLESLVPVDLEALGEHRQSYALLTNDEGGVRDDLIITRWGPDTFFLVVNAACKAED 122
Query: 317 ---MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
++ +A + L E +GL+AVQGP + +L L F+
Sbjct: 123 RAWIESQLAPGQTLREL-----------EGQGLLAVQGPKARAVLAELLPF-AEDLTFLQ 170
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G P +T +GYTGEDG E+SVP Q + +LL+ +DV GLGARDSL
Sbjct: 171 GAHGELNGAPIYVTCSGYTGEDGYELSVPEAQVEAVARSLLAHDDVAPIGLGARDSL 227
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 17 ETGGFPGASIIQSQIKSGVSRKRTGFTSTGV-PIRPGYEIFNANDQRVGAITSGCPSPSL 75
+ GG+PGA I ++ G SR R G G P+R G + NA + +GA++SG + ++
Sbjct: 265 KAGGYPGAERIAREMSEGTSRVRVGMRVLGKRPVREGQNVLNAAGEVIGAVSSGAFAATV 324
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+AM +++ +Y+ + EL V VR K + V V K+P V YY
Sbjct: 325 DAPVAMAFVDSSYAALDTELSVDVRGKALAVVVCKLPLVPQRYY 368
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E +GL+AVQGP + +L L F+ + G P +T +GYTGEDG E+SV
Sbjct: 140 EGQGLLAVQGPKARAVLAELLPF-AEDLTFLQGAHGELNGAPIYVTCSGYTGEDGYELSV 198
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P Q + +LL+ +DV GLGARDSL
Sbjct: 199 PEAQVEAVARSLLAHDDVAPIGLGARDSL 227
>gi|380495763|emb|CCF32143.1| glycine cleavage system T protein [Colletotrichum higginsianum]
Length = 479
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 139/258 (53%), Gaps = 23/258 (8%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S + +TPLYD H++HGGKMV F G MPVQY +S+ SH TR+ S+FDVSHM+Q
Sbjct: 74 SKQDKTPLYDFHIAHGGKMVIFGGHHMPVQYAGLSLADSHHFTRTHASLFDVSHMVQHRF 133
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSNA-S 311
TG +LE++ + V +++ LS F GGI DD ++T+ E+ LVSNA +
Sbjct: 134 TGPRAAAFLETVTPSSVADMEVNTSKLSTFLWPGTGGIVDDTMITRLGEEEFALVSNAGT 193
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD----LDLS 367
R KV L + GK+ + L E GLIA+QGP S+ ILQ D DL+
Sbjct: 194 REKVFEYLTEQTAELQNPEGKEFWWEVL--EGYGLIALQGPQSAEILQEVVDPADGADLT 251
Query: 368 SLYFMTSRPCTI----------AGIPCTLTRAGYTGEDGVEISVP--GEQCTHIVEALL- 414
SLYF + + ++R GYTGEDG EIS G + + L+
Sbjct: 252 SLYFGNTAFARLRYQVDGQWKSTSDKAMISRGGYTGEDGFEISFKSTGGEADPLARTLMK 311
Query: 415 --SDEDVKLAGLGARDSL 430
E ++LAGLGARDSL
Sbjct: 312 VAGPERLQLAGLGARDSL 329
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 13 KRRRETGGFPGASIIQSQI------KSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
K RR GGF GA +I QI +G+ R+R GF G P R G EIF + ++VG I
Sbjct: 359 KERRTKGGFHGAEVINKQIVPKSKGGTGIERRRVGFVVNGAPAREGAEIFTKDGEKVGVI 418
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
TSG PSP+L KNIAMGYI+ K G EL V VR ++ V KMPFV S Y+ P
Sbjct: 419 TSGSPSPTLGKNIAMGYIKEGLHKSGTELDVVVRGRKRAATVAKMPFVPSKYFKGP 474
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 21/119 (17%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD----LDLSSLYFMTSRPCTI------- 504
GK+ + L E GLIA+QGP S+ ILQ D DL+SLYF + +
Sbjct: 213 GKEFWWEVL--EGYGLIALQGPQSAEILQEVVDPADGADLTSLYFGNTAFARLRYQVDGQ 270
Query: 505 ---AGIPCTLTRAGYTGEDGVEISVP--GEQCTHIVEALL---SDEDVKLAGLGARDSL 555
++R GYTGEDG EIS G + + L+ E ++LAGLGARDSL
Sbjct: 271 WKSTSDKAMISRGGYTGEDGFEISFKSTGGEADPLARTLMKVAGPERLQLAGLGARDSL 329
>gi|94986005|ref|YP_605369.1| glycine cleavage system T protein [Deinococcus geothermalis DSM
11300]
gi|94556286|gb|ABF46200.1| glycine cleavage system T protein [Deinococcus geothermalis DSM
11300]
Length = 374
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 133/234 (56%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+ HL G +MVPF G+ MPVQY + A H R++ VFDVSHM + VTG
Sbjct: 27 KRTPLHAAHLRAGARMVPFGGWEMPVQY--TGVKAEHDAVRTRAGVFDVSHMGEFRVTGP 84
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E +L+ + DV +L PG+ + NE GG+ DD+ V + + LV NA+ + D
Sbjct: 85 DAEAFLQRVTTNDVTKLKPGRAQYNWLPNESGGLVDDIYVYRVGPEEFLLVVNAANIEKD 144
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A R+ S G D+ L S + GL+AVQGP S T+LQ HTD+DLS+ P
Sbjct: 145 W----AHLQRYAS-GFDVGLSDES-DRWGLLAVQGPQSETLLQPHTDVDLSAKKKNAYFP 198
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G L R GYTGEDG EI V E+ + EALL+ AGLGARD+L
Sbjct: 199 ATLLGFDVWLARTGYTGEDGFEIFVKAEEAEALWEALLALGLTP-AGLGARDTL 251
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 470 GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGE 529
GL+AVQGP S T+LQ HTD+DLS+ P T+ G L R GYTGEDG EI V E
Sbjct: 167 GLLAVQGPQSETLLQPHTDVDLSAKKKNAYFPATLLGFDVWLARTGYTGEDGFEIFVKAE 226
Query: 530 QCTHIVEALLSDEDVKLAGLGARDSL 555
+ + EALL+ AGLGARD+L
Sbjct: 227 EAEALWEALLALGLTP-AGLGARDTL 251
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 47 VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDV 106
VP+R GY + N +R+G +TSG SP+L IAM + + V VR K
Sbjct: 306 VPVREGYPVLLGN-ERIGHVTSGTSSPTLGHPIAMALVRADAADAEAYA-VEVRGKTHPA 363
Query: 107 KVTKMPFVK 115
+ +PF K
Sbjct: 364 RRVALPFYK 372
>gi|344942992|ref|ZP_08782279.1| glycine cleavage system T protein [Methylobacter tundripaludum
SV96]
gi|344260279|gb|EGW20551.1| glycine cleavage system T protein [Methylobacter tundripaludum
SV96]
Length = 360
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 135/234 (57%), Gaps = 11/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+LHL G +MVPFAG+ MPVQYG ++ HLH RS FD+SHM Q ++ G
Sbjct: 3 KQTPLYNLHLELGARMVPFAGYLMPVQYGNGTLH-EHLHCRSHAGFFDISHMGQCLILGD 61
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
L + +D+ L G ++ TN GGI DD+I+T+ ++ L +V NA+ + D
Sbjct: 62 DAVPELGQLIPSDISGLKSGDQKYTVLTNSDGGIMDDIIITR-IDTGLMIVVNAACKDKD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + LG L+++ L A+QGP +++I+++ + + L FM +
Sbjct: 121 F------KHLYSHLGGRCCFNELTSQ--ALFALQGPAAASIMEKFS-AQAAELSFMQACG 171
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI C ++R+GYTGEDG EISV + LL+++DV+ GL ARD+L
Sbjct: 172 TNIKGIKCNVSRSGYTGEDGFEISVGHHYAEQLARLLLAEDDVEPIGLAARDTL 225
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSGCPSP 73
++ FPGA I +Q++ G + R G + +P+R G I N+ VG +TSG SP
Sbjct: 254 KKADNNFPGAEKILAQLQHGSEKIRVGLLIDSKIPVREGSVICNSEGIAVGYVTSGSFSP 313
Query: 74 SLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
L + IAM ++P +G L+ VRD R+ V +T +PF+ YY
Sbjct: 314 CLDQPIAMAMLDPYTVDLGSPLYTMVRDHRITVTLTPLPFIPHRYY 359
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
+ L A+QGP +++I+++ + + L FM + I GI C ++R+GYTGEDG EISV
Sbjct: 140 QALFALQGPAAASIMEKFS-AQAAELSFMQACGTNIKGIKCNVSRSGYTGEDGFEISVGH 198
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
+ LL+++DV+ GL ARD+L
Sbjct: 199 HYAEQLARLLLAEDDVEPIGLAARDTL 225
>gi|406911269|gb|EKD51103.1| hypothetical protein ACD_62C00348G0009 [uncultured bacterium]
Length = 359
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLYD H G ++VPFAG+ MPVQY V H R++V +FDVSHM + +TG
Sbjct: 6 RTPLYDEHKKLGARLVPFAGWEMPVQYSGV--IGEHQAVRTRVGMFDVSHMGEFFITGDR 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
EE+L + DV +L G +L E G + DDLIV++ +S V NAS + D
Sbjct: 64 AEEFLNRVTTNDVTKLTDGACQYTLLCYENGTVVDDLIVSRVSVNSFIAVVNASNIQKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
D +V+ SL E GLIAVQGP S +++ D S L + R
Sbjct: 124 DWLVSQNKEGVSLVD-------KTREFGLIAVQGPKSQSVVNDILKADFSGLLYYHFRES 176
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G + R GYTGEDG E+ VP + + LL+ DV+ GLGARD+L
Sbjct: 177 SFLGHNIFVMRTGYTGEDGFELMVPSAKTPDLWRELLA-RDVQPVGLGARDTL 228
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E GLIAVQGP S +++ D S L + R + G + R GYTGEDG E+ VP
Sbjct: 142 EFGLIAVQGPKSQSVVNDILKADFSGLLYYHFRESSFLGHNIFVMRTGYTGEDGFELMVP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL+ DV+ GLGARD+L
Sbjct: 202 SAKTPDLWRELLA-RDVQPVGLGARDTL 228
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKK 77
G F G++++ SG+ RK GF I R +F D++VG +TSG SPSLKK
Sbjct: 261 GPFVGSAVLNQLKDSGLQRKVVGFEMLDPGIARADCGVF-LGDEQVGYVTSGTHSPSLKK 319
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPF 113
+I + ++ ++++G E V +R ++ V K PF
Sbjct: 320 SIGLALVKTGWTQIGTEFLVDIRGQKKKAVVVKTPF 355
>gi|312112826|ref|YP_004010422.1| glycine cleavage system protein T [Rhodomicrobium vannielii ATCC
17100]
gi|311217955|gb|ADP69323.1| glycine cleavage system T protein [Rhodomicrobium vannielii ATCC
17100]
Length = 383
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 131/238 (55%), Gaps = 14/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL LH G K+VPFAG+ MPV Y A I H H R + FDVSHM Q + G
Sbjct: 16 RQTPLAALHHELGAKLVPFAGYEMPVSY-ATGIVKEHAHVRERAGFFDVSHMGQARIAGP 74
Query: 257 H---REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS-LFLVSNASR 312
E + D+ L PG+ + N++GGI DDL+ T+ + + LFLV NASR
Sbjct: 75 DFATVAAAFERLVPGDIAGLKPGQIRYTQLLNDEGGIIDDLMATREADGTGLFLVVNASR 134
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
++VD + A L + L L+ +R L+A+QGP ++ +L+R + L FM
Sbjct: 135 KEVDFAHIAA------HLPPSVTLAPLA--DRSLVALQGPEAARVLKRQMP-EAGGLAFM 185
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ P G ++R+GYTGEDG EISVP + +LL+ +V GLGARD+L
Sbjct: 186 TAAPLDWRGTAVFVSRSGYTGEDGFEISVPADAAEAFARSLLAHPEVAPIGLGARDTL 243
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP ++ +L+R + L FMT+ P G ++R+GYTGEDG EISVP
Sbjct: 157 DRSLVALQGPEAARVLKRQMP-EAGGLAFMTAAPLDWRGTAVFVSRSGYTGEDGFEISVP 215
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ +LL+ +V GLGARD+L
Sbjct: 216 ADAAEAFARSLLAHPEVAPIGLGARDTL 243
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGC 70
GKRRR GGF GA +Q ++ G +R R G G R +I + + +G ITSG
Sbjct: 272 GKRRRRDGGFIGAERVQRELAEGPARVRVGLRLEGRSAARTHMKIASETGETMGEITSGA 331
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRKV 127
+P+ +IA GY+ P S G + V +R V +PFV Y +RKV
Sbjct: 332 YTPTAAASIAFGYVPPRSSTAGTRVAVEIRGAFQPALVVDLPFVPHRY-----VRKV 383
>gi|163744671|ref|ZP_02152031.1| glycine cleavage system T protein [Oceanibulbus indolifex HEL-45]
gi|161381489|gb|EDQ05898.1| glycine cleavage system T protein [Oceanibulbus indolifex HEL-45]
Length = 377
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 143/240 (59%), Gaps = 17/240 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
++T L+DLH+ G KMVPFAG++MPVQY + + HLHTR+ +FDVSHM Q VV
Sbjct: 5 KQTALHDLHVELGAKMVPFAGYAMPVQY-PLGVMKEHLHTRAAAGLFDVSHMGQVVVRAK 63
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G + + L E++ DV L + ++FT+ GGI DDL++ L D LF+V NA
Sbjct: 64 SGSYDDAALAMETLVPVDVLGLGEMRQRYAMFTDPNGGILDDLMLAN-LGDHLFVVVNAG 122
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ LM ++L + ++ L ++R L+A+QGP + L R L ++ + F
Sbjct: 123 CKDDDIALMK------EALSETCEIEVL--DDRALLALQGPQAEAALARLQPL-VADMKF 173
Query: 372 M-TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M ++ I GI TL+R+GYTGEDG EISV + LL+ E+V+ GLGARDSL
Sbjct: 174 MDVAKDVDIDGITVTLSRSGYTGEDGYEISVANADAEALARKLLALEEVEPIGLGARDSL 233
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA +I Q+ G RKR G G P+R G IF+A + VG +TSG P+
Sbjct: 272 AGGFPGAGVILQQLADGAPRKRVGLLPEGRAPMREGVAIFDAAEGGNEVGTVTSGGFGPT 331
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ ++KV LW VR KR+ + VTKMPFV +N+
Sbjct: 332 VGGPVAMGYVTAEHAKVDTPLWGEVRGKRLPLTVTKMPFVAANF 375
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFM-TSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
++R L+A+QGP + L R L ++ + FM ++ I GI TL+R+GYTGEDG EIS
Sbjct: 145 DDRALLALQGPQAEAALARLQPL-VADMKFMDVAKDVDIDGITVTLSRSGYTGEDGYEIS 203
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
V + LL+ E+V+ GLGARDSL
Sbjct: 204 VANADAEALARKLLALEEVEPIGLGARDSL 233
>gi|297566415|ref|YP_003685387.1| glycine cleavage system T protein [Meiothermus silvanus DSM 9946]
gi|296850864|gb|ADH63879.1| glycine cleavage system T protein [Meiothermus silvanus DSM 9946]
Length = 350
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 11/233 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++H G KM PFAG+ MP+QY SITA HL R VFDVSHM + V G
Sbjct: 4 TPLTEIHQQLGAKMAPFAGYLMPIQY--TSITAEHLAVRQGAGVFDVSHMGEFWVRGPQA 61
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++L+ + DV +L G+ S+ NE+GG+ DD+ + +T E+ +V NA+ + D
Sbjct: 62 LDFLQYATLNDVSKLKVGRAQYSMLPNERGGVVDDIYLYRTGEEEYLVVVNAANIEKDW- 120
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ L + ++ A ER GL+AVQGP ++ +LQ+ D+DLSS +
Sbjct: 121 ------SHLQRLAEGFSVRLEDASERTGLLAVQGPNAAKVLQKLCDVDLSSKKKNDTFTA 174
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+AG P L R GYTGEDG E+ + +ALL V GLGARD+L
Sbjct: 175 TVAGKPARLARTGYTGEDGFELFTEATDLRAVWDALLQ-AGVTPCGLGARDTL 226
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 524
+ E GL+AVQGP ++ +LQ+ D+DLSS + T+AG P L R GYTGEDG E+
Sbjct: 137 ASERTGLLAVQGPNAAKVLQKLCDVDLSSKKKNDTFTATVAGKPARLARTGYTGEDGFEL 196
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ +ALL V GLGARD+L
Sbjct: 197 FTEATDLRAVWDALLQ-AGVTPCGLGARDTL 226
>gi|401626349|gb|EJS44299.1| gcv1p [Saccharomyces arboricola H-6]
Length = 400
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 134/241 (55%), Gaps = 11/241 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L+DLH+S GG MVP+AG+SMPV Y + SH TR+ +FDVSHMLQ+ ++G
Sbjct: 17 KKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKLSGL 76
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK-TLEDSLFLVSNASRRKV 315
H ++L + D L G GTLS+ N +GG+ DD I+TK L + ++V+NA +
Sbjct: 77 HSVKFLHRVTPTDCDALSVGSGTLSVLLNPEGGVVDDTIITKENLNNDFYIVTNAGCAER 136
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTIL-----QRHTDLDLSSLY 370
D + +L D + + E R L+A+QGP + +L ++ L L+
Sbjct: 137 DTQFLRGELQNDPTL--DCRWEII--EGRSLLALQGPKAKDVLEALLEEKAHGKALKDLF 192
Query: 371 FMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
F ++ G + R GYTGEDG EISVP E+ E LL++ +K GL ARDS
Sbjct: 193 FGQRHEFSLKDGTLVQIARGGYTGEDGFEISVPNEKAVEFAEQLLANPVMKPIGLAARDS 252
Query: 430 L 430
L
Sbjct: 253 L 253
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 13 KRRR----ETGGFPGASIIQSQIKSGV-SRKRTGFT--STGVPIRPGYEIFNANDQ-RVG 64
K RR E F G + I Q+ + +R R F G R G +IF + Q VG
Sbjct: 283 KSRRDLTNEEDWFNGYTKIMDQLNNKTYNRIRVAFKYLKKGPAARNGIKIFLPDTQTEVG 342
Query: 65 AITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+TSG SPSL NI GY+E + K G +L V+VR+K +++ KMP V ++YY
Sbjct: 343 LVTSGSASPSLNNINIGQGYVEKGHHKRGTQLLVQVRNKFYPIELAKMPLVPTHYY 398
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 467 EERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPCTIA-GIPCTLTRAGYTGED 520
E R L+A+QGP + +L+ + L L+F ++ G + R GYTGED
Sbjct: 159 EGRSLLALQGPKAKDVLEALLEEKAHGKALKDLFFGQRHEFSLKDGTLVQIARGGYTGED 218
Query: 521 GVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G EISVP E+ E LL++ +K GL ARDSL
Sbjct: 219 GFEISVPNEKAVEFAEQLLANPVMKPIGLAARDSL 253
>gi|153005382|ref|YP_001379707.1| glycine cleavage system aminomethyltransferase T [Anaeromyxobacter
sp. Fw109-5]
gi|152028955|gb|ABS26723.1| glycine cleavage system T protein [Anaeromyxobacter sp. Fw109-5]
Length = 360
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 129/237 (54%), Gaps = 13/237 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
QRTPL+D H+ G +MV FAG+ MPVQY V A H R++ +FDVSHM + V G
Sbjct: 3 QRTPLFDTHVRSGARMVEFAGWEMPVQYAGV--LAEHEAVRTRAGLFDVSHMGEVVFRGP 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E L + D+ ++ G+ E GGI DD++V + D L + NA+ R+ D
Sbjct: 61 RALEALSRLFTNDLSKVADGQAQYGCLCRESGGIVDDVVVYRRAADDLLVCVNAANRQKD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + G D+ + ++E +A+QGPL++ +LQR T DL ++
Sbjct: 121 HEWLAG-----HAAGADVRNE---SDEWAQLALQGPLAARVLQRLTSADLPAIRTYRFAR 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 430
+AG+PC + R GYTGEDG E+ P + + +A++ E ++ GLGARDSL
Sbjct: 173 GEVAGVPCLIARTGYTGEDGFELFCPPDAAARLWDAVVDSGEPEGLQPCGLGARDSL 229
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E +A+QGPL++ +LQR T DL ++ +AG+PC + R GYTGEDG E+
Sbjct: 138 DEWAQLALQGPLAARVLQRLTSADLPAIRTYRFARGEVAGVPCLIARTGYTGEDGFELFC 197
Query: 527 PGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
P + + +A++ E ++ GLGARDSL
Sbjct: 198 PPDAAARLWDAVVDSGEPEGLQPCGLGARDSL 229
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 17 ETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSL 75
+ G F G + Q + G++RK GF T I R GY + + ++VG +TSG SPSL
Sbjct: 260 DKGEFVGRDALVRQKEQGLARKLVGFVLTDPGIARHGYPVVQ-DGRKVGEVTSGTRSPSL 318
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPF 113
+I + Y+ PA + G V +R + KV K PF
Sbjct: 319 GTSIGLAYVPPALAAEGSTFAVEIRGRPAAAKVVKTPF 356
>gi|338714889|ref|XP_003363164.1| PREDICTED: aminomethyltransferase, mitochondrial isoform 3 [Equus
caballus]
Length = 347
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 113/182 (62%), Gaps = 4/182 (2%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKIFGCDRVRLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A D+ LM +++G D+ L+ + + L+A+QGP ++ +LQ DL L
Sbjct: 90 AGCWDKDLALMQDKVRELQNIGSDVGLEVV---DNALLALQGPTAAQVLQAGVADDLKKL 146
Query: 370 YFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
FMTS + G+ C +TR GYTGEDGVEISVP + ALL + +VKLAGL ARD
Sbjct: 147 PFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAVGAVRLATALLENPEVKLAGLAARD 206
Query: 429 SL 430
SL
Sbjct: 207 SL 208
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 67/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA++I Q+K V R+R G G P+R I + +G +TSGCP
Sbjct: 237 GKRRRAAMDFPGATVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILSTEGTVIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYY
Sbjct: 297 SPCLKKNVAMGYVPCEYSRPGTPLLVEVRQKQQMAVVSKMPFVPTNYY 344
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNIGSDVGLEVV---DNALLALQGPTAAQVLQAGVADDLKKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPAVGAVRLATALLENPEVKLAGLAARDSL 208
>gi|58039556|ref|YP_191520.1| glycine cleavage system protein T [Gluconobacter oxydans 621H]
gi|58001970|gb|AAW60864.1| Aminomethyltransferase (Glycine cleavage system T protein)
[Gluconobacter oxydans 621H]
Length = 383
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/240 (42%), Positives = 133/240 (55%), Gaps = 18/240 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
QRTPLYDL+L G KMVPFAGF MP+Q+ A +T HLHTR K +FDVSHM Q + K
Sbjct: 12 QRTPLYDLNLELGAKMVPFAGFEMPIQFPAGLMT-EHLHTREKAGLFDVSHMGQIRIAAK 70
Query: 257 HRE-----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+ LE++ AD L G+ L TNE+GGI DDL+V +D L +V NA
Sbjct: 71 SGDVKDAAAALETLVPADFVGLAAGRQRYGLLTNEKGGILDDLMVANMGKD-LLVVVNAG 129
Query: 312 RRKVDMD-LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ D D + A DR + QF +R L+A+QGP + L + +
Sbjct: 130 CKVQDADRIEKALSDRCV-----VTRQF----DRALMALQGPAAEAALAPLCPA-VKDMR 179
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM +AG+P T++R+GYTGEDG EI G + A+L+ DV GLGARDSL
Sbjct: 180 FMDVIETELAGVPVTVSRSGYTGEDGFEIGCAGADAEKVARAILAQPDVLPIGLGARDSL 239
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 13 KRRRE----TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQR-VGA 65
K RRE GG+PGA ++ Q + GV+RKR G + G P+R G ++F +A Q+ +G
Sbjct: 269 KARREGGVREGGYPGADVVLKQTRDGVARKRVGLVADGRAPVRAGAKLFADAEGQKEIGV 328
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG PS+K +AMGY+ P Y+ V ++ +R K V + V MPFV +
Sbjct: 329 VTSGAFGPSVKAPVAMGYVTPEYAAVDTPVFAELRGKYVPLHVRAMPFVAPGF 381
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + L + + FM +AG+P T++R+GYTGEDG EI
Sbjct: 153 DRALMALQGPAAEAALAPLCPA-VKDMRFMDVIETELAGVPVTVSRSGYTGEDGFEIGCA 211
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
G + A+L+ DV GLGARDSL
Sbjct: 212 GADAEKVARAILAQPDVLPIGLGARDSL 239
>gi|383649226|ref|ZP_09959632.1| glycine cleavage system aminomethyltransferase T [Sphingomonas
elodea ATCC 31461]
Length = 387
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 134/238 (56%), Gaps = 17/238 (7%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE 259
PL H + GG+MVPFAG++MPVQY I A HL TR +FDVSHM Q + +G +
Sbjct: 19 PLDAWHRARGGRMVPFAGYAMPVQY--EGIMAEHLWTREHAGLFDVSHMGQLLFSGVAFD 76
Query: 260 EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDL 319
LE++ DV L G+ SL +E+GGI DDL++T+ D+ F + + + +
Sbjct: 77 AGLETLLPGDVKGLGEGRMRYSLLLSEEGGIHDDLMMTRLPADNAFEIDGGT-----IYM 131
Query: 320 MVAAQDRFKSLGKDIHLQFL-------SAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+V ++ LG + +FL E++ L+A+QGP + T L R + L FM
Sbjct: 132 VVNGATKWDDLG--VFREFLPDEVTINHLEDQALLALQGPEAVTALARVLP-GVEKLVFM 188
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+ G P ++R+GYTGEDG EIS+PGE +AL + +VK GLGARDSL
Sbjct: 189 TAAAFEWNGNPLWVSRSGYTGEDGYEISLPGEAAEAFADALTAQPEVKPIGLGARDSL 246
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGF GA I ++ + G + KR G G P+R G + +A VG +TSG
Sbjct: 276 KRRREEGGFAGAERILAEREQGSAMKRVGLIVEGRQPVREGAVVVDATGAEVGKVTSGGF 335
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+PS++K IAM Y+ A + G + + R K+ +V MPFV Y
Sbjct: 336 APSVQKPIAMAYVPSALAAAGTTITLVQRGKQHSAEVVAMPFVPHRY 382
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E++ L+A+QGP + T L R + L FMT+ G P ++R+GYTGEDG EIS+
Sbjct: 159 EDQALLALQGPEAVTALARVLP-GVEKLVFMTAAAFEWNGNPLWVSRSGYTGEDGYEISL 217
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
PGE +AL + +VK GLGARDSL
Sbjct: 218 PGEAAEAFADALTAQPEVKPIGLGARDSL 246
>gi|310657740|ref|YP_003935461.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [[Clostridium]
sticklandii]
gi|308824518|emb|CBH20556.1| aminomethyltransferase, tetrahydrofolate-dependent, subunit (T
protein) of glycine cleavage complex [[Clostridium]
sticklandii]
Length = 365
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 149/279 (53%), Gaps = 27/279 (9%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL++++ ++ K+VPFAG+ MP+++ IT H R+ +FDVSHM + V GK
Sbjct: 6 KRTPLFEVYGNYDPKIVPFAGWEMPIEFKG--ITEEHKMVRTSAGIFDVSHMGEIEVKGK 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
EE+ + IC D+ +L+ + S E G + DD++V K +D LV NA D
Sbjct: 64 DAEEFCQKICTNDISKLEDNQILYSFMCYENGTVVDDILVYKFSQDDFMLVVNAGNISKD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+ +V + G ++++ +S + G +AVQGP + ILQ+ TD DLS + +F R
Sbjct: 124 YEWIVN-----HTTGYEVNINNIS-DNIGQVAVQGPKAEAILQKFTDTDLSEIKFFYALR 177
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSG 432
I GI ++R GYTGEDG EI + + + +L +ED+ GLGARD+L
Sbjct: 178 NVDIKGINTIVSRTGYTGEDGFEIYCEAKDSVKLWKLILDESPEEDILPIGLGARDTLRF 237
Query: 433 DITLN----------TPVPHGS---LKLSNDRFKSLGKD 458
+ L TP+ G +KL D F +GK+
Sbjct: 238 EANLPLYGNELSDEITPIEAGYGYFVKLDKDDF--IGKE 274
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRA 514
G ++++ +S + G +AVQGP + ILQ+ TD DLS + +F R I GI ++R
Sbjct: 133 GYEVNINNIS-DNIGQVAVQGPKAEAILQKFTDTDLSEIKFFYALRNVDIKGINTIVSRT 191
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
GYTGEDG EI + + + +L +ED+ GLGARD+L
Sbjct: 192 GYTGEDGFEIYCEAKDSVKLWKLILDESPEEDILPIGLGARDTL 235
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G +++Q G+ RK GF I R GYE++ ND ++G +T+G SP+L+K+I
Sbjct: 270 FIGKEALKAQKSEGLKRKIVGFELLDKRISRHGYEVYLEND-KIGIVTTGYQSPTLQKSI 328
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ I+ Y +G E+++ +R+K+V K+ F K
Sbjct: 329 GLALIDAQYVALGNEIYIDIRNKKVPAKIVSRNFYK 364
>gi|334132621|ref|ZP_08506378.1| Glycine cleavage system T protein, GcvT [Methyloversatilis
universalis FAM5]
gi|333442587|gb|EGK70557.1| Glycine cleavage system T protein, GcvT [Methyloversatilis
universalis FAM5]
Length = 375
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 135/239 (56%), Gaps = 14/239 (5%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A +RTPL+ LHL+ G KMV FAG+ MP+QY I HLHTR+ +FDVSHM Q V
Sbjct: 7 AALRRTPLHPLHLAAGAKMVTFAGWDMPIQY-VPGILQEHLHTRTHAGLFDVSHMGQIEV 65
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+G WLES+ AD+ L G+ T +L TN+ GGI DDL++ K + +V NA+R
Sbjct: 66 SGPGACAWLESLTTADLVALPDGRQTYALLTNDAGGIIDDLMIQK-VGPVFHVVCNAARL 124
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
V AQ G D + E+R L+A+QGP + +LQ D++ L F+
Sbjct: 125 A-----QVQAQFAAHPPGADCSVTL--HEDRALLALQGPQAEAVLQPLA--DVAGLRFLD 175
Query: 374 SR--PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
R P +AG L+R+GYTGEDG EIS+P LL V+ GLGARD+L
Sbjct: 176 VREYPDAVAG-GLRLSRSGYTGEDGFEISLPAAAAPAFAARLLEHPQVRWIGLGARDTL 233
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 9 IFPGKRRR--ETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGA 65
+ P +R GGFPGA II ++ + ++ R G P R G I +A + +G
Sbjct: 261 VAPARRHGGPRAGGFPGADIILAEFAAPPAKVRVALLPDGRAPQRAGARIVDAEGRELGV 320
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
ITSG SP+L + IAM I A G L++ R ++V +T PFV + Y
Sbjct: 321 ITSGNHSPTLGRPIAMASIARAAKDAGTPLFIDSRGQKVAAALTAFPFVPNRY 373
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR--PCTIAGIPCTLTRAGYTGEDGVEI 524
E+R L+A+QGP + +LQ D+ + L F+ R P +AG L+R+GYTGEDG EI
Sbjct: 146 EDRALLALQGPQAEAVLQPLADV--AGLRFLDVREYPDAVAG-GLRLSRSGYTGEDGFEI 202
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S+P LL V+ GLGARD+L
Sbjct: 203 SLPAAAAPAFAARLLEHPQVRWIGLGARDTL 233
>gi|300855594|ref|YP_003780578.1| aminomethyltransferase [Clostridium ljungdahlii DSM 13528]
gi|300435709|gb|ADK15476.1| aminomethyltransferase [Clostridium ljungdahlii DSM 13528]
Length = 368
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 151/279 (54%), Gaps = 27/279 (9%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+D + +G K++ FAG+ MPVQ+ IT+ H R K +FDVSHM + +TGK
Sbjct: 5 KKTPLFDSYKKYGAKIIDFAGWDMPVQFEG--ITSEHQAVRKKAGLFDVSHMGEADITGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++++ D ++ + + +GGI DD++V K + FLV NA+ D
Sbjct: 63 DALEFVQNLITNDAAKIKENQILYTPMCYPEGGIVDDILVYKFTNEHFFLVINAANTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+D M ++ F+ K+I + +A+QGP + ILQ+ TD DL S+ ++ +
Sbjct: 123 IDWMKKNKENFQVDIKNISPSIIQ------LAIQGPNAQKILQKLTDTDLDSIKFYFFKK 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSG 432
+AG C ++R GYTGEDG EI E ++ + +L ++ +K GLGARD+L
Sbjct: 177 DVLVAGKRCMVSRTGYTGEDGFEIYSETENAEYLWDKILETGKEDGIKPIGLGARDTLRF 236
Query: 433 DITLN----------TPVPHG---SLKLSNDRFKSLGKD 458
+++L TP+ G +KL D F +GKD
Sbjct: 237 EVSLPLYGNELSKSITPLEAGIGIFVKLDKDNF--IGKD 273
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + ILQ+ TD DL S+ ++ + +AG C ++R GYTGEDG EI E
Sbjct: 147 LAIQGPNAQKILQKLTDTDLDSIKFYFFKKDVLVAGKRCMVSRTGYTGEDGFEIYSETEN 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
++ + +L ++ +K GLGARD+L
Sbjct: 207 AEYLWDKILETGKEDGIKPIGLGARDTL 234
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 20 GFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q K G+ RK GF I R GYE+F A ++++G +T+G SPSL KN
Sbjct: 268 NFIGKDALVKQKKEGLKRKIVGFEMKERGISRHGYEVF-AENKKIGEVTTGYRSPSLNKN 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
I I+ Y+ +G + ++VR+K ++ +V F NY
Sbjct: 327 IGFALIDSKYAPIGTSISIKVRNKLLNAEVVSKKFYNKNY 366
>gi|393772426|ref|ZP_10360872.1| aminomethyltransferase [Novosphingobium sp. Rr 2-17]
gi|392722107|gb|EIZ79526.1| aminomethyltransferase [Novosphingobium sp. Rr 2-17]
Length = 378
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 129/228 (56%), Gaps = 13/228 (5%)
Query: 205 HLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLES 264
H GG+MV FAG+ MPVQY I A HL TR +FDVSHM Q +++G E LE+
Sbjct: 25 HRERGGRMVEFAGYMMPVQY--EGIMAEHLWTRENAGLFDVSHMGQVLISGDEVEPALEA 82
Query: 265 ICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQ 324
D+ L G SL +EQGGI DDL+V + D +LV N + + D+ +
Sbjct: 83 ALPIDLSTLKLGAVRYSLLLDEQGGILDDLMVAR-WPDGFYLVVNGATKWDDIGTLR--- 138
Query: 325 DRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT--DLDLSSLYFMTSRPCTIAGI 382
+ L D+ L L ++R L+A+QGP + L+RH + LS+L FM T+ G+
Sbjct: 139 ---ELLPDDVTLNHL--DDRALLALQGPKAFAALERHATGEYPLSALTFMKGGRFTLGGV 193
Query: 383 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
++R+GYTGEDG EIS+P + + + L + +VK GLGARDSL
Sbjct: 194 DAWISRSGYTGEDGFEISIPADAAEAVAQLLCGEPEVKPIGLGARDSL 241
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR GGFPGA + +G SR R G + G + R G E+F +DQ+VG +TSG
Sbjct: 271 KRRRNEGGFPGAPRVLDDFANGTSRLRVGLSVEGRMAAREGAEVF-IDDQKVGVVTSGGF 329
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSL++ IAM Y++ A++ G +L + R KR++ V MPFV Y+
Sbjct: 330 SPSLQQPIAMAYVDAAFAAHGTKLTLETRGKRLNAHVVPMPFVPHRYH 377
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHT--DLDLSSLYFMTSRPCTIAGIPCTLT 512
L D+ L L ++R L+A+QGP + L+RH + LS+L FM T+ G+ ++
Sbjct: 141 LPDDVTLNHL--DDRALLALQGPKAFAALERHATGEYPLSALTFMKGGRFTLGGVDAWIS 198
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EIS+P + + + L + +VK GLGARDSL
Sbjct: 199 RSGYTGEDGFEISIPADAAEAVAQLLCGEPEVKPIGLGARDSL 241
>gi|254516183|ref|ZP_05128243.1| glycine cleavage system T protein [gamma proteobacterium NOR5-3]
gi|219675905|gb|EED32271.1| glycine cleavage system T protein [gamma proteobacterium NOR5-3]
Length = 370
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 133/237 (56%), Gaps = 16/237 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPL LH G +MVPFAG+ MPVQY + I A H HTR +FDVSHM Q ++ G
Sbjct: 4 KHTPLDSLHRELGARMVPFAGYDMPVQY-SKGIIAEHRHTREHAGLFDVSHMGQFILEGP 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E LES+ D+ L + + +L TN++GG++DDLI+T+ + FLV NAS +
Sbjct: 63 GITETLESLVPVDLQALGEHRQSYALLTNDEGGVRDDLIITRWGAHAFFLVVNASCK--- 119
Query: 317 MDLMVAAQDRF---KSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
AQDR +L L+ L + GL+A+QGP + +L + ++L F+
Sbjct: 120 ------AQDRTWIESNLSAGQSLRELDGQ--GLLALQGPRARDVLSSLLP-ETAALTFLQ 170
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
C + G+P +T +GYTGEDG E+S+ E LLS E + GLGARDSL
Sbjct: 171 GAHCELDGMPVYVTCSGYTGEDGYELSMAAEHTGIFARKLLSHEATEPVGLGARDSL 227
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTGV-PIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GG+PGA I Q+ G +R R G G P+R G E+ N + + VG ITSG + ++
Sbjct: 266 AGGYPGAERIARQLSEGTARVRIGMRVLGKRPVREGQEVLNGDGEVVGVITSGAYAATVD 325
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
IAM +++ AY+ + EL V VR K + V V K+P V YY
Sbjct: 326 APIAMAFVDSAYAALDTELGVYVRGKTLPVVVCKLPVVPQRYY 368
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
+GL+A+QGP + +L + ++L F+ C + G+P +T +GYTGEDG E+S+
Sbjct: 142 QGLLALQGPRARDVLSSLLP-ETAALTFLQGAHCELDGMPVYVTCSGYTGEDGYELSMAA 200
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
E LLS E + GLGARDSL
Sbjct: 201 EHTGIFARKLLSHEATEPVGLGARDSL 227
>gi|304320912|ref|YP_003854555.1| glycine cleavage system T protein [Parvularcula bermudensis
HTCC2503]
gi|303299814|gb|ADM09413.1| Glycine cleavage system T protein [Parvularcula bermudensis
HTCC2503]
Length = 387
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 138/250 (55%), Gaps = 23/250 (9%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S +R PL LH G KMVPFAG+ MP+QY I A HLH R K +FDVSHM Q +
Sbjct: 2 STTKRLPLDALHRELGAKMVPFAGYEMPIQYKE-GIKAEHLHVREKAGLFDVSHMGQAYL 60
Query: 254 T-------GKHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK--TLED 302
T H + +E++ ++ +L G+ ++ NE+GGI DDL++T+ T D
Sbjct: 61 TSDRVGSEADHAKVAAAIETLVPGEISQLKRGRIRYTVLLNEEGGILDDLMITRLPTAAD 120
Query: 303 S--LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR 360
LFLV NA+ + D D+M DR L L L ++R L+A+QGP + ++
Sbjct: 121 DGRLFLVVNAAVKSRDFDVMA---DR---LADQARLDVL--DQRALLALQGPKAHEVMAS 172
Query: 361 HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVK 420
+ FM++ + G+P ++R GYTGEDG E+SVP +Q + E LL E V+
Sbjct: 173 LIP-QTEEMPFMSAMDAELDGLPILVSRCGYTGEDGFELSVPADQARSVAERLLDHEAVE 231
Query: 421 LAGLGARDSL 430
GLGARDSL
Sbjct: 232 PIGLGARDSL 241
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGC 70
GKRRR GGFPGA + +++ G S+ R G G P R G EI + + +G +TSG
Sbjct: 270 GKRRRMEGGFPGAERVMAELTHGCSQVRVGLRPLGRAPAREGTEIHHNDGASIGIVTSGT 329
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P++ IAMGY++ YS+ G + + +R K ++ ++PF++ Y+
Sbjct: 330 FGPTVDGPIAMGYVDRDYSQPGQAVSLMIRGKAHPAEIVRLPFIEPRYF 378
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + ++ + FM++ + G+P ++R GYTGEDG E+SV
Sbjct: 154 DQRALLALQGPKAHEVMASLIP-QTEEMPFMSAMDAELDGLPILVSRCGYTGEDGFELSV 212
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P +Q + E LL E V+ GLGARDSL
Sbjct: 213 PADQARSVAERLLDHEAVEPIGLGARDSL 241
>gi|319793005|ref|YP_004154645.1| glycine cleavage system t protein [Variovorax paradoxus EPS]
gi|315595468|gb|ADU36534.1| glycine cleavage system T protein [Variovorax paradoxus EPS]
Length = 392
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 131/233 (56%), Gaps = 10/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLYDLH+ G +MVPFAG+SMPVQY A + A H HTR +FD+SHM Q + G
Sbjct: 15 KTPLYDLHVELGARMVPFAGYSMPVQYPA-GLMAEHKHTRDAAGLFDISHMGQLRLVGPD 73
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E++ DV +L GK L N++GGI DDL+ S+F++ N + + D+
Sbjct: 74 AAAAFETLMPVDVIDLPAGKQRYGLLLNDEGGILDDLMFFNEGHCSIFVIVNGACKVADI 133
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + +G +Q L + L+A+QGP ++ L R + + FMT
Sbjct: 134 AHIQ------QKIGARCEVQPLP--DHALLALQGPQAAATLARLSP-GIERFVFMTGGAV 184
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GIP +TR+GYTGEDG EISV G+ + LL+ +VK GLGAR+SL
Sbjct: 185 QIGGIPAFVTRSGYTGEDGFEISVAGKDADALARLLLAQPEVKPIGLGARNSL 237
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 13/114 (11%)
Query: 19 GGFPGASIIQSQIKSG------------VSRKRTGFTSTG-VPIRPGYEIFNANDQRVGA 65
GGFPGA I +Q+ + + RKR G + +P+R G + + Q +G
Sbjct: 277 GGFPGAGKILAQLTAATVGAAGHTDHDTLKRKRVGLVALERIPVRDGTMLQSFEGQDIGI 336
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+TSG PS + IAMGY+ A+S+ G + VR K V ++V+ MPFV + YY
Sbjct: 337 VTSGLLGPSADRCIAMGYVATAFSEPGTRVQAIVRGKPVPMEVSTMPFVPTRYY 390
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+ L+A+QGP ++ L R + + FMT I GIP +TR+GYTGEDG EISV
Sbjct: 151 DHALLALQGPQAAATLARLSP-GIERFVFMTGGAVQIGGIPAFVTRSGYTGEDGFEISVA 209
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
G+ + LL+ +VK GLGAR+SL
Sbjct: 210 GKDADALARLLLAQPEVKPIGLGARNSL 237
>gi|403217057|emb|CCK71552.1| hypothetical protein KNAG_0H01390 [Kazachstania naganishii CBS
8797]
Length = 380
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 129/227 (56%), Gaps = 11/227 (4%)
Query: 212 MVPFAGFSMPVQY-GAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADV 270
MVPFAG+SMP+ Y G + SH R +FDVSHMLQ+ +TG + L+ I D
Sbjct: 1 MVPFAGYSMPLLYPGIQTHVESHRWVRQHAGLFDVSHMLQSKLTGTGAVKLLDKITPTDF 60
Query: 271 HELDPGKGTLSLFTNEQGGIQDDLIVTKTLE----DSLFLVSNASRRKVDMDLMVAAQDR 326
+L P G+LS+ N+QGG+ DDL+V + E D ++V+NASR K D + + ++
Sbjct: 61 TQLQPCSGSLSVLLNKQGGVIDDLMVFREPEGFPGDGFYMVTNASRAKEDSEFI---RNE 117
Query: 327 FKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTIA-GIP 383
L ++ +Q+ S E LIA+QGP S+ +L+ DL L F T +A G
Sbjct: 118 LNELPENARIQWESIEGTALIALQGPSSAAVLESLVADPADLKKLTFGTRDYVHLADGTR 177
Query: 384 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ R GYTGEDG EI+VPG E LLS+ +VK GL ARDSL
Sbjct: 178 VGVMRGGYTGEDGFEIAVPGASAEKFAEQLLSNNEVKPIGLAARDSL 224
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTIA-G 506
+ L ++ +Q+ S E LIA+QGP S+ +L+ DL L F T +A G
Sbjct: 116 NELNELPENARIQWESIEGTALIALQGPSSAAVLESLVADPADLKKLTFGTRDYVHLADG 175
Query: 507 IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R GYTGEDG EI+VPG E LLS+ +VK GL ARDSL
Sbjct: 176 TRVGVMRGGYTGEDGFEIAVPGASAEKFAEQLLSNNEVKPIGLAARDSL 224
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 21 FPGASIIQSQIKSGV-SRKRTGF----TSTGVPIRPGYEIFNAND-QRVGAITSGCPSPS 74
F G + I Q+++ R R GF T+ R G I +A ++VG +TSG SPS
Sbjct: 267 FNGYAKIMDQLQNKTHGRVRVGFQYLETTPAPAARTGDRILDATSGEQVGTVTSGSVSPS 326
Query: 75 LKK-------NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
L NI Y+ + K G L V VR KR + V K+P V ++YY
Sbjct: 327 LSDEATKRTVNIGQAYVAQGHHKAGTGLVVEVRRKRFPITVAKLPLVPTHYY 378
>gi|225386602|ref|ZP_03756366.1| hypothetical protein CLOSTASPAR_00349 [Clostridium asparagiforme
DSM 15981]
gi|225047300|gb|EEG57546.1| hypothetical protein CLOSTASPAR_00349 [Clostridium asparagiforme
DSM 15981]
Length = 366
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 132/237 (55%), Gaps = 12/237 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLYD+H+ GGK+VPFAG+ +PVQYG + A H+ R+K +FDVSHM + ++ G
Sbjct: 9 KTPLYDIHVESGGKIVPFAGYLLPVQYG-TGVIAEHMAVRTKCGLFDVSHMGEIILKGPD 67
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ L + D + G+ S NE+GG+ DDLIV K +D F+V NA+ + D
Sbjct: 68 ALKNLNHLLTNDYTVMACGQARYSPMCNEEGGVVDDLIVYKVRDDCYFIVVNAANKDKDY 127
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-HTDLDLSSLYFMTSRP 376
M A + + L +SA L A+QGP + IL++ + D+ Y+
Sbjct: 128 AWMKA------HVSGEAQLSDISASVAQL-ALQGPKAMDILRKVAREEDIPEKYYTCKFH 180
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
CTI G+ C +++ GYTGEDGVEI + E + L+ DE + GLGARD+L
Sbjct: 181 CTIDGMDCIISKTGYTGEDGVEIYLASEDAPRLWRLLMEHGRDEGLIPCGLGARDTL 237
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQR-HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + IL++ + D+ Y+ CTI G+ C +++ GYTGEDGVEI + E
Sbjct: 150 LALQGPKAMDILRKVAREEDIPEKYYTCKFHCTIDGMDCIISKTGYTGEDGVEIYLASED 209
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ L+ DE + GLGARD+L
Sbjct: 210 APRLWRLLMEHGRDEGLIPCGLGARDTL 237
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIA 80
F G I++ K ++RKR G TG I ++ A + +G TSG P L +A
Sbjct: 272 FIGKKAIEA--KGPLTRKRVGLKVTGRGIVREHQAVYAGGEPIGVTTSGTHCPYLGYPVA 329
Query: 81 MGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
M ++ AY + G + V VR +RV ++ K+PF K
Sbjct: 330 MALLDIAYKEPGTAVEVDVRGRRVAAEIVKLPFYK 364
>gi|254482917|ref|ZP_05096153.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2148]
gi|214036789|gb|EEB77460.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2148]
Length = 369
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 129/232 (55%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH G KMVPFAG+ MPVQY A I HL TR +FDVSHM Q ++ G
Sbjct: 6 TPLDALHRELGAKMVPFAGYDMPVQYPA-GIIKEHLQTREAAGLFDVSHMGQVIIEGAGV 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ DV L T +L TN+QGG+ DDLI+T+ +D FLV NA+ ++ D+
Sbjct: 65 AAMLESLVPVDVEGLGINCQTYALLTNDQGGVLDDLIITRWAQDKFFLVVNAACKEQDI- 123
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A R G+ ++ LS ++ L+A+QGP + ++ + L FM T
Sbjct: 124 ----AHLRSHLAGQS--MKVLS--DQALLALQGPKAREVMSELCPAAV-ELVFMQGCAAT 174
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI +T +GYTGEDG E+S+P + +L E V+ GLGARDSL
Sbjct: 175 IDGIEVYITCSGYTGEDGFEVSMPNGAADVLARRILDFEQVEPIGLGARDSL 226
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRKRTGFTSTGV-PIRPGYEIFN 57
+ + LL K RR GGFPG+ I +I + +R G T G P+R G + N
Sbjct: 246 VQAGLLWSVSKSRRADGARAGGFPGSDTIFDRIINKPDLRRVGLTVDGKRPVREGQTVLN 305
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
AN + VG I S SL IAM Y++ G EL V VR K + V VTKMPF
Sbjct: 306 ANGEAVGEICSAAYGASLGGPIAMAYVQRQLGDPGTELAVDVRGKLLPVTVTKMPFSPQR 365
Query: 118 YY 119
YY
Sbjct: 366 YY 367
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
++ L+A+QGP + ++ + L FM TI GI +T +GYTGEDG E+S+P
Sbjct: 140 DQALLALQGPKAREVMSELCPAAVE-LVFMQGCAATIDGIEVYITCSGYTGEDGFEVSMP 198
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ +L E V+ GLGARDSL
Sbjct: 199 NGAADVLARRILDFEQVEPIGLGARDSL 226
>gi|323135588|ref|ZP_08070671.1| glycine cleavage system T protein [Methylocystis sp. ATCC 49242]
gi|322398679|gb|EFY01198.1| glycine cleavage system T protein [Methylocystis sp. ATCC 49242]
Length = 383
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 131/233 (56%), Gaps = 13/233 (5%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE 259
PL LH S G +M PFAG+ MPVQY A I A L TR K +FDVSHM Q ++ G
Sbjct: 16 PLDRLHRSLGARMAPFAGYDMPVQY-ASGIVAETLQTREKAGLFDVSHMGQAILAGAGAA 74
Query: 260 EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKT--LEDSLFLVSNASRRKVDM 317
LES+ AD+ L PG+ + +E GGI DDL+VT+ +E+ LFLV NASR+ D
Sbjct: 75 RALESLTPADLAGLAPGRTRYTQLLDESGGILDDLLVTRLPGVEERLFLVVNASRKTADF 134
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
L+ A F L L+ +R LIA+QGP +++IL L FM+ R
Sbjct: 135 ALIAARLPHFD-------LNILN--DRALIALQGPCAASILGALLP-GAEDLPFMSWRAF 184
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R GYTGEDG EIS+ ++ V LL+ EDV GLGARD+L
Sbjct: 185 DFDGASFFVSRTGYTGEDGFEISLRADRAEDFVMRLLAHEDVAPVGLGARDAL 237
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGC 70
GKRRR GGFPG + I + + G SR R G + P+R G + N + +G +TSG
Sbjct: 266 GKRRRAEGGFPGFARISAALGDGPSRLRVGLLPQSKAPVRDGATLLAPNGEEIGLVTSGG 325
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP+L++ IAMGY+ ++ G L VR KRVD+ VT +PFV Y+ P
Sbjct: 326 FSPTLQRPIAMGYVARGHASPGASLSTDVRGKRVDMIVTPLPFVAHRYHKP 376
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+R LIA+QGP +++IL L FM+ R G ++R GYTGEDG EIS+
Sbjct: 150 NDRALIALQGPCAASILGALLP-GAEDLPFMSWRAFDFDGASFFVSRTGYTGEDGFEISL 208
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ V LL+ EDV GLGARD+L
Sbjct: 209 RADRAEDFVMRLLAHEDVAPVGLGARDAL 237
>gi|376295233|ref|YP_005166463.1| glycine cleavage system T protein [Desulfovibrio desulfuricans
ND132]
gi|323457794|gb|EGB13659.1| glycine cleavage system T protein [Desulfovibrio desulfuricans
ND132]
Length = 361
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 126/238 (52%), Gaps = 9/238 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q TPL H +G KM PFAGF MPVQY + + H HTR K +FD+ HM + ++GK
Sbjct: 5 QTTPLTQWHRENGAKMAPFAGFDMPVQYKGIIV--EHKHTREKAGIFDICHMGEFKLSGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++ L +I D++ L PGK N GGI DDLIV ED LV N + R+ D
Sbjct: 63 GAKDALNTIVSHDLNTLAPGKCRYGFLLNASGGINDDLIVYCLAEDEYMLVVNGACRQKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
D +AA + DI ++E G I VQGP S ++ + L +
Sbjct: 123 FD-HIAANLPSGLVFTDI------SDETGKIDVQGPESLEVVNALLGCKWNHLKYFNFEQ 175
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDI 434
+ G P ++R GYTGE G E+ +P ++ + E L++DE V+ GLGARD+L +I
Sbjct: 176 TDVLGFPMIVSRTGYTGELGYELYLPSDKALDVWEKLMADERVEPVGLGARDTLRLEI 233
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E G I VQGP S ++ + L + + G P ++R GYTGE G E+ +
Sbjct: 141 DETGKIDVQGPESLEVVNALLGCKWNHLKYFNFEQTDVLGFPMIVSRTGYTGELGYELYL 200
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + E L++DE V+ GLGARD+L
Sbjct: 201 PSDKALDVWEKLMADERVEPVGLGARDTL 229
>gi|414342027|ref|YP_006983548.1| glycine cleavage system protein T [Gluconobacter oxydans H24]
gi|411027362|gb|AFW00617.1| glycine cleavage system protein T [Gluconobacter oxydans H24]
Length = 377
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 133/239 (55%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
QRTPL+ L+L G KMVPFAG+ MP+QY A + A HLHTRSK +FDVSHM Q +
Sbjct: 6 QRTPLHALNLELGAKMVPFAGYEMPLQYPA-GLMAEHLHTRSKAGLFDVSHMGQIRIAAR 64
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G R+ L ES+ AD L G+ TN+ GI DDL+V + D LF+V NAS
Sbjct: 65 SGDVRDAALALESLIPADYAGLAKGRQRYGFLTNDAAGILDDLMVA-NMGDDLFVVVNAS 123
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
++ D L+ AA + + QF +R L+A+QGP + + + + F
Sbjct: 124 CKEQDAALIEAALSDCCIVTR----QF----DRALMALQGPQAQEAIAPLCSA-AADMRF 174
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M +AG+P TL+R+GYTGEDG EI + ALL+ V GLGARDSL
Sbjct: 175 MDVIEAELAGVPVTLSRSGYTGEDGYEIGCAAADAEIVARALLAQSQVLPIGLGARDSL 233
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 13 KRRRE----TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQR-VGA 65
K RRE GG+PGA I+ Q++ GVSRKR G + G P+R G ++F +A Q+ +G
Sbjct: 263 KARREGGSREGGYPGAEIVLRQVREGVSRKRVGLMAEGRAPVRAGAKLFADAEGQKEIGL 322
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG P+++ +AMGY+E Y+ L+ +R K V V V MPFV +
Sbjct: 323 VTSGAFGPTVQAPVAMGYVETDYAGNDTALFAELRGKFVPVHVRAMPFVAPGF 375
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + + + + FM +AG+P TL+R+GYTGEDG EI
Sbjct: 147 DRALMALQGPQAQEAIAPLCSA-AADMRFMDVIEAELAGVPVTLSRSGYTGEDGYEIGCA 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ ALL+ V GLGARDSL
Sbjct: 206 AADAEIVARALLAQSQVLPIGLGARDSL 233
>gi|398810439|ref|ZP_10569254.1| glycine cleavage system T protein [Variovorax sp. CF313]
gi|398082616|gb|EJL73359.1| glycine cleavage system T protein [Variovorax sp. CF313]
Length = 406
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 130/233 (55%), Gaps = 10/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLYDLHL G +MVPFAG+SMPVQY A + A H HTR +FD+SHM Q + G
Sbjct: 29 KTPLYDLHLELGARMVPFAGYSMPVQYPA-GLMAEHKHTRDAAGLFDISHMGQLRLVGPD 87
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E++ DV +L GK L N++GGI DDL+ S+F++ N + + D+
Sbjct: 88 AAAAFETLMPVDVIDLPAGKQRYGLLLNDEGGIIDDLMFFNEGHGSIFVIVNGACKVADI 147
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + +G +Q L + L+A+QGP ++ L R + + FMT
Sbjct: 148 AHIQ------QKIGARCDVQPLP--DHALLALQGPQAAATLARLSP-GVERFVFMTGGAV 198
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GIP +TR+GYTGEDG EISV + + LL+ +VK GLGAR+SL
Sbjct: 199 QIGGIPAFVTRSGYTGEDGFEISVAAKDADALARLLLAQPEVKPIGLGARNSL 251
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 18 TGGFPGASIIQSQIKSG------------VSRKRTGFTSTG-VPIRPGYEIFNANDQRVG 64
GGFPGA+ + +Q+ + + RKR G + +P+R G + + Q +G
Sbjct: 290 AGGFPGAAKVLAQLTASTVGAAGHTDHDTLKRKRVGLVALERIPVRDGTVLQSFEGQDIG 349
Query: 65 AITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+TSG P+ + IAMGY+ A+++ G + VR K V ++V+ MPFV + YY
Sbjct: 350 LVTSGLLGPTADRCIAMGYVATAFAEPGTRIQAIVRGKPVPMEVSTMPFVPTRYY 404
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+ L+A+QGP ++ L R + + FMT I GIP +TR+GYTGEDG EISV
Sbjct: 165 DHALLALQGPQAAATLARLSP-GVERFVFMTGGAVQIGGIPAFVTRSGYTGEDGFEISVA 223
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL+ +VK GLGAR+SL
Sbjct: 224 AKDADALARLLLAQPEVKPIGLGARNSL 251
>gi|190349070|gb|EDK41653.2| hypothetical protein PGUG_05751 [Meyerozyma guilliermondii ATCC
6260]
Length = 393
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 135/244 (55%), Gaps = 20/244 (8%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLYD H+ GGKMV +AGF MPV Y + SH RSKV +FDVSHMLQ G
Sbjct: 18 RTPLYDCHVELGGKMVDYAGFEMPVLYKGQTHVESHNWVRSKVGLFDVSHMLQHKFKGAQ 77
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E L+ I D+ L +L++ N+ GG+ DD I+TK E+ ++V+NA R D+
Sbjct: 78 PRELLQKITPIDLAYLPINSSSLTVLLNKNGGVIDDCIITKHGENDYYMVTNAGCRTKDV 137
Query: 318 DLMVAAQDRFKSLGKDI-HLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ F D+ H F E L+A+QGP ++ +LQ+ T+ DLS + F ++
Sbjct: 138 KFIKEEAANF-----DVDHSTF----EGTLLAIQGPEAAGLLQKFTNEDLSKITFGNTKY 188
Query: 377 CTIA--GIPCTLTRAGYTGEDGVEISVP------GEQCTHIVEALLSD--EDVKLAGLGA 426
++ G L R+GYTGEDG E+S+P ++ + +L+ D + V+ GL A
Sbjct: 189 LKLSSIGADVHLARSGYTGEDGFELSIPSSTPQESQESQNFFRSLIEDYPDLVRPIGLAA 248
Query: 427 RDSL 430
RDSL
Sbjct: 249 RDSL 252
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 9 IFPGKRRRETGG-FPGASIIQSQIKSGV--SRKRTGFTSTGVPIRPGYEIFNANDQRVGA 65
+ P RR E F GAS I SQIK S+KR G S G R G ++F+ + + +G
Sbjct: 279 LIPKSRRDEKNATFNGASKILSQIKDKTLCSKKRIGLLSKGPSPRDGNKLFSEDGKEIGH 338
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
ITSG PSP+L N+A Y + K G +++ R K+ + V KMPFV+S +Y
Sbjct: 339 ITSGSPSPTLGGNVAQAYADKLL-KSGTKVFFESRGKKREAIVAKMPFVESKFY 391
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA--GIPCTLTRAGYTGEDGVEIS 525
E L+A+QGP ++ +LQ+ T+ DLS + F ++ ++ G L R+GYTGEDG E+S
Sbjct: 155 EGTLLAIQGPEAAGLLQKFTNEDLSKITFGNTKYLKLSSIGADVHLARSGYTGEDGFELS 214
Query: 526 VP------GEQCTHIVEALLSD--EDVKLAGLGARDSL 555
+P ++ + +L+ D + V+ GL ARDSL
Sbjct: 215 IPSSTPQESQESQNFFRSLIEDYPDLVRPIGLAARDSL 252
>gi|86281958|gb|ABC91021.1| aminomethyltransferase protein [Rhizobium etli CFN 42]
Length = 356
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 131/224 (58%), Gaps = 17/224 (7%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK--HREEW---LESIC 266
MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V K H E+ LES+
Sbjct: 1 MVPFAGYDMPVQYPA-GVMKEHLHTRTEAGLFDVSHMGQVIVKAKSGHYEDAALALESLV 59
Query: 267 VADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDR 326
D+ L G+ FT++ GGI DDL++T L+D LF+V NAS + D+ + A
Sbjct: 60 PVDILGLAEGRQRYGFFTDDTGGILDDLMITH-LDDHLFVVVNASCKDADLAHLRA---- 114
Query: 327 FKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 386
+ + L+ R LIA+QGP + +L D++++ FM R C + + C +
Sbjct: 115 --HISDQCDITLLN---RALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLV 168
Query: 387 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+R+GY+GEDG EISVP ++ + LL DV+ GLGARDSL
Sbjct: 169 SRSGYSGEDGFEISVPADKAEDVAMRLLEHPDVQAIGLGARDSL 212
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EISVP
Sbjct: 126 NRALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVP 184
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 185 ADKAEDVAMRLLEHPDVQAIGLGARDSL 212
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQ-RVGAITSGCPSPSLKK 77
FPG+ I S++++G +R+R G G P+R ++ +A Q +G +TSG PS+
Sbjct: 254 FPGSGRILSELENGAARRRVGLKPEGKAPVRGHARLYADAEGQTEIGEVTSGGFGPSVDG 313
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ +++ G ++ VR K + V ++ +PF+ Y
Sbjct: 314 PVAMGYVPVSHAAPGTLIYAEVRGKYLPVTISALPFITPTY 354
>gi|119184181|ref|XP_001243020.1| hypothetical protein CIMG_06916 [Coccidioides immitis RS]
Length = 1023
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 142/268 (52%), Gaps = 51/268 (19%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S +S SA +T LYDLH+ H KMVPFAG+SMP+QY S SH TR+ S+FDVSH
Sbjct: 561 SSTASKSALNKTELYDLHVEHKAKMVPFAGYSMPLQYADQSHLESHHWTRTHASLFDVSH 620
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLF-TNEQGGIQDDLIVTKTLEDSLFL 306
+L+ D H TLS F E GGI DD ++T+ +S +
Sbjct: 621 ILK------------------DNHS------TLSCFLEQETGGIVDDTVITRLGPESFYF 656
Query: 307 VSNASRRKVDMDLMVAAQDRFK------SLGKDIHLQFLSAEERGLIAVQGPLSSTILQR 360
V+NA RRK D++ + + F+ + IH L + R L+A+QGP S+ +LQ
Sbjct: 657 VTNAGRRKEDLEFLTNEIEAFRQTHDPSTRASVIHWSIL--DNRALLALQGPSSAAVLQS 714
Query: 361 -------HTDLDLSSLYFMTSRPCTI-----AGIPCTL--TRAGYTGEDGVEISVPGEQC 406
+ DL++L+F R + + P L +R GYTGEDG EIS+P +
Sbjct: 715 LVTQGEASVEGDLTTLHFGQCRQLHLDFPDGSHTPARLLISRTGYTGEDGFEISIPTDHD 774
Query: 407 TH----IVEALLSDEDVKLAGLGARDSL 430
H + E LLS+ +V+LAGL ARDSL
Sbjct: 775 PHLPRRVAELLLSNPEVRLAGLAARDSL 802
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 20/115 (17%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTI-----AG 506
IH L + R L+A+QGP S+ +LQ + DL++L+F R + +
Sbjct: 690 IHWSIL--DNRALLALQGPSSAAVLQSLVTQGEASVEGDLTTLHFGQCRQLHLDFPDGSH 747
Query: 507 IPCTL--TRAGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
P L +R GYTGEDG EIS+P + H + E LLS+ +V+LAGL ARDSL
Sbjct: 748 TPARLLISRTGYTGEDGFEISIPTDHDPHLPRRVAELLLSNPEVRLAGLAARDSL 802
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 13/105 (12%)
Query: 12 GKRRRE----TGGFPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNAN--DQ 61
GK RR+ F G+S+I Q+ S + +R G T G P R G I + N D
Sbjct: 831 GKDRRDPSSPLSSFNGSSVILPQLASPAKTLKERRVGLTIEAGAPAREGSPIVDINNPDT 890
Query: 62 RVGAITSGCPSPSLK-KNIAMGYIEPAYSKVGVELWV--RVRDKR 103
+G ITSG PSPSL NIAMGYI+ K G E+ V R+ D++
Sbjct: 891 HIGIITSGLPSPSLNGTNIAMGYIKQGLHKKGTEVGVLLRIEDRK 935
>gi|346320808|gb|EGX90408.1| aminomethyltransferase [Cordyceps militaris CM01]
Length = 437
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 142/261 (54%), Gaps = 26/261 (9%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ A ++TPLYDLH++ GGKMVPFAG+ MPVQY A S+T SH TR S+FDVSHM+Q
Sbjct: 36 AAGGALKKTPLYDLHVARGGKMVPFAGYHMPVQYSAQSLTDSHHFTRQHASLFDVSHMVQ 95
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTL-SLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
+ G +LE + + + L +L GGI DD ++T+ ED ++V+N
Sbjct: 96 HIFKGPRAAAFLERVTPSAWATQGAMQSKLTALLWPGTGGIVDDTVITRLGEDEYYVVTN 155
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTIL-----QRHTDL 364
+ D ++ G + L + GL A+QGP ++ IL + + D+
Sbjct: 156 GACLDKDTKYF---DEQLGQFGAGVEWTRL--DNSGLFALQGPQAAEILAQVLDREYADV 210
Query: 365 DLSSLYFMTSRPCTI------AGIPCTLTRAGYTGEDGVEISVPGEQ------CTHIVEA 412
+L LYF + + + P ++R GYTGEDG E+S G+Q T VEA
Sbjct: 211 NLERLYFGNAVWAQLKLADGSSTHPVLISRGGYTGEDGFEVSFNGQQYPAFDTTTPAVEA 270
Query: 413 LLSD---EDVKLAGLGARDSL 430
LL+ E ++LAGLGARDSL
Sbjct: 271 LLAAAGPERLQLAGLGARDSL 291
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
I P +RR GF GA ++ +Q+ +GV R+R GF G P R G + + ++
Sbjct: 318 IIPKERRAADAGFHGAEVLVAQMTPRSKGGAGVQRRRVGFVVEGAPAREGATV-EKDGEK 376
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+G +TSG PSP+L KNIAMGY++ K G E+ V VR ++ V KMPF+++ Y+
Sbjct: 377 IGDVTSGVPSPTLGKNIAMGYVKDGLHKAGTEVDVVVRGRKRKAVVAKMPFIQTRYW 433
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 22/130 (16%)
Query: 446 KLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTIL-----QRHTDLDLSSLYFMTSR 500
K +++ G + L + GL A+QGP ++ IL + + D++L LYF +
Sbjct: 164 KYFDEQLGQFGAGVEWTRL--DNSGLFALQGPQAAEILAQVLDREYADVNLERLYFGNAV 221
Query: 501 PCTI------AGIPCTLTRAGYTGEDGVEISVPGEQ------CTHIVEALLSD---EDVK 545
+ + P ++R GYTGEDG E+S G+Q T VEALL+ E ++
Sbjct: 222 WAQLKLADGSSTHPVLISRGGYTGEDGFEVSFNGQQYPAFDTTTPAVEALLAAAGPERLQ 281
Query: 546 LAGLGARDSL 555
LAGLGARDSL
Sbjct: 282 LAGLGARDSL 291
>gi|190891940|ref|YP_001978482.1| glycine cleavage system aminomethyltransferase T [Rhizobium etli
CIAT 652]
gi|190697219|gb|ACE91304.1| aminomethyltransferase protein [Rhizobium etli CIAT 652]
Length = 356
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 133/224 (59%), Gaps = 17/224 (7%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV---TGKHREEWL--ESIC 266
MVPFAG+ MPVQY A + HLHTR++ +FDVSHM Q +V +G + + L ES+
Sbjct: 1 MVPFAGYDMPVQYPA-GVMKEHLHTRTEAGLFDVSHMGQVIVKAKSGSYEDAALALESLV 59
Query: 267 VADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDR 326
D+ L G+ FT++ GGI DDL++T L+D LF+V NAS ++ D+ + A
Sbjct: 60 PVDILSLAEGRQRYGFFTDDTGGILDDLMITH-LDDHLFVVVNASCKEADLAHLQA---- 114
Query: 327 FKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 386
+G + L+ R LIA+QGP + +L D++++ FM R C + + C +
Sbjct: 115 --HIGDQCDITLLN---RALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLV 168
Query: 387 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+R+GY+GEDG EIS+P ++ + LL DV+ GLGARDSL
Sbjct: 169 SRSGYSGEDGFEISIPSDKAEDVTMRLLEHPDVQAIGLGARDSL 212
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
R LIA+QGP + +L D++++ FM R C + + C ++R+GY+GEDG EIS+P
Sbjct: 127 RALIALQGPRAVEVLAELW-ADVAAMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISIPS 185
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + LL DV+ GLGARDSL
Sbjct: 186 DKAEDVTMRLLEHPDVQAIGLGARDSL 212
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQ-RVGAITSGCPSPS 74
GGFPG+ I S++++G +R+R G G P+R ++ +A Q +G +TSG PS
Sbjct: 251 AGGFPGSGRILSELENGAARRRVGLKPEGKAPVRGHARLYADAEGQTEIGEVTSGGFGPS 310
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G +++ VR K + V V+ +PFV Y
Sbjct: 311 VEGPVAMGYVPVSHAAAGTQVYAEVRGKFLPVTVSALPFVTPTY 354
>gi|398353648|ref|YP_006399112.1| aminomethyltransferase GcvT [Sinorhizobium fredii USDA 257]
gi|390128974|gb|AFL52355.1| aminomethyltransferase GcvT [Sinorhizobium fredii USDA 257]
Length = 474
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 132/239 (55%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+ TPL+ LHLS G +MVPFAG+ MPVQY + HLHTR+ +FDVSHM Q +
Sbjct: 103 KHTPLHALHLSLGARMVPFAGYEMPVQY-PEGVLKEHLHTRAAAGLFDVSHMGQIAIRPK 161
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G+ + L E + DV L G+ LFTN +GGI DDL++ D LFLV NA+
Sbjct: 162 SGRIADAALALEKLVPVDVLGLAEGRQRYGLFTNPEGGILDDLMIANR-GDHLFLVVNAA 220
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + LG + L ++R L+A+QGP + +L D++S+ F
Sbjct: 221 CKDADHAHLK------DGLGDACDVTLL--DDRALVALQGPRAEAVLCELW-ADVASMRF 271
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + + C ++R+GYTGEDG EIS+P + + LL DV GLGARDSL
Sbjct: 272 MDLAEADLHDVACIISRSGYTGEDGFEISIPTASAVDVTQRLLEHPDVLAIGLGARDSL 330
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPS 74
GGFPGA I +++ G R+R G G P+R G ++F D V G++TSG PS
Sbjct: 369 AGGFPGADRILAELAGGTDRRRVGLKPEGRAPVRGGAKLFTDPDGTVLVGSVTSGGFGPS 428
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+E A+++ G +L+ VR K + + V+ +PFVK Y
Sbjct: 429 VDCPVAMGYVETAHARNGTKLFAEVRGKYLPITVSALPFVKQTY 472
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + +L D++S+ FM + + C ++R+GYTGEDG EIS+
Sbjct: 243 DDRALVALQGPRAEAVLCELW-ADVASMRFMDLAEADLHDVACIISRSGYTGEDGFEISI 301
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL DV GLGARDSL
Sbjct: 302 PTASAVDVTQRLLEHPDVLAIGLGARDSL 330
>gi|408673189|ref|YP_006872937.1| Aminomethyltransferase [Emticicia oligotrophica DSM 17448]
gi|387854813|gb|AFK02910.1| Aminomethyltransferase [Emticicia oligotrophica DSM 17448]
Length = 366
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 137/241 (56%), Gaps = 13/241 (5%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+ +R PL DLH GGKMVPF GF MPV+Y S H R+ V VFDVSHM + VV
Sbjct: 3 TENKRIPLNDLHEKLGGKMVPFGGFMMPVRYS--SDNEEHNCVRNGVGVFDVSHMGEFVV 60
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G+ E+L+ I DV L GK + F N +GG+ DDL+V + E+ +LV NAS
Sbjct: 61 RGERATEFLQYIVSNDVSALFDGKVQYAYFPNNEGGVVDDLLVYRWNENEYYLVVNASNI 120
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D + + ++ S G + L+ +S + L AVQGP + +Q+ TD+DLSS+ + T
Sbjct: 121 EKDWNWV----NQNNSFG--VELENIS-DNLCLFAVQGPKALATIQKLTDIDLSSMDYYT 173
Query: 374 SRPCTIAGIPCTLTRA-GYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDS 429
+ ++AGI + A GYTG G EI V + + A+ ++ D+K GLGARD+
Sbjct: 174 FKAGSVAGIDDVIVSATGYTGAGGFEIYVWNKDAEKMWNAIFEAGAEFDIKPIGLGARDT 233
Query: 430 L 430
L
Sbjct: 234 L 234
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
T F + +++Q ++G+ RK G G+P R YEI +A ++G +TSG SP+L
Sbjct: 265 TKNFINSENLKAQKEAGLKRKLVGIEMIDRGIP-RSHYEICDAEGNKLGEVTSGTQSPTL 323
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+K IAMG++ A+SK+G E++++VRDK + VTK+PFVK+
Sbjct: 324 QKGIAMGHVPTAFSKIGTEVYIKVRDKLLKGVVTKLPFVKA 364
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA-GYTGEDGVEISVPGE 529
L AVQGP + +Q+ TD+DLSS+ + T + ++AGI + A GYTG G EI V +
Sbjct: 146 LFAVQGPKALATIQKLTDIDLSSMDYYTFKAGSVAGIDDVIVSATGYTGAGGFEIYVWNK 205
Query: 530 QCTHIVEALL---SDEDVKLAGLGARDSL 555
+ A+ ++ D+K GLGARD+L
Sbjct: 206 DAEKMWNAIFEAGAEFDIKPIGLGARDTL 234
>gi|310793303|gb|EFQ28764.1| glycine cleavage system T protein [Glomerella graminicola M1.001]
Length = 483
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 139/258 (53%), Gaps = 23/258 (8%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S + +TPLYD H++HGGKMV F G MPVQY +S+T SH TR+ S+FDVSHM+Q
Sbjct: 78 SKQDKTPLYDFHIAHGGKMVIFGGHHMPVQYAGLSLTESHHFTRTHASLFDVSHMVQHRF 137
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSNA-S 311
TG +LE++ + V ++D LS F GGI DD ++T+ E+ +VSNA +
Sbjct: 138 TGPRAAAFLETVTPSSVADMDVNTSKLSTFLWPGTGGIVDDTMITRLGEEEFAVVSNAGT 197
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD----LDLS 367
R K+ L GK+ + L E GLIA+QGP S+ ILQ D +DL+
Sbjct: 198 REKIFKYLTEQTAGLQNPEGKEFWWEVL--EGYGLIALQGPQSAEILQEVVDPADSVDLT 255
Query: 368 SLYFMTSRPCTI----------AGIPCTLTRAGYTGEDGVEISVPGE--QCTHIVEALLS 415
SL+F + + ++R GYTGEDG EIS + + LL
Sbjct: 256 SLHFGNTAFARLRYQVDGQWRSTSDKAMISRGGYTGEDGFEISFKSTNGEADPLARTLLQ 315
Query: 416 ---DEDVKLAGLGARDSL 430
E ++LAGLGARDSL
Sbjct: 316 VAGPERLQLAGLGARDSL 333
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 13 KRRRETGGFPGASIIQSQI------KSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
K RR GGF GA +I QI +G+ R+R GF +G P R G +IF + ++VG I
Sbjct: 363 KERRTKGGFHGAEVINKQIVPKSKGGTGIERRRVGFVVSGAPAREGADIFTKDGEKVGVI 422
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
TSG PSP+L KNIAMGY++ K G EL V VR K+ V KMPFV S Y+ P
Sbjct: 423 TSGSPSPTLGKNIAMGYVKEGLHKSGTELDVVVRGKKRAATVAKMPFVPSKYFKGP 478
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 21/119 (17%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD----LDLSSLYFMTSRPCTI------- 504
GK+ + L E GLIA+QGP S+ ILQ D +DL+SL+F + +
Sbjct: 217 GKEFWWEVL--EGYGLIALQGPQSAEILQEVVDPADSVDLTSLHFGNTAFARLRYQVDGQ 274
Query: 505 ---AGIPCTLTRAGYTGEDGVEISVPGE--QCTHIVEALLS---DEDVKLAGLGARDSL 555
++R GYTGEDG EIS + + LL E ++LAGLGARDSL
Sbjct: 275 WRSTSDKAMISRGGYTGEDGFEISFKSTNGEADPLARTLLQVAGPERLQLAGLGARDSL 333
>gi|331211617|ref|XP_003307078.1| glycine cleavage system T protein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309297481|gb|EFP74072.1| glycine cleavage system T protein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 426
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 132/242 (54%), Gaps = 13/242 (5%)
Query: 197 QRTPLYDLHL--SHGGKMVPFAGFSMPVQYG-AVSITASHLHTRSKVSVFDVSHMLQTVV 253
++TP+Y LH+ S+G KMVPFAGF MP+ Y + A H R + +FDVSHM+Q+
Sbjct: 51 KKTPIYPLHVHPSNGAKMVPFAGFDMPLSYSKSGGQIAEHAAVRKECGLFDVSHMVQSRY 110
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
GK E+L + + + + TLS+ NE+GGI DD ++T+ E +LV+NA RR
Sbjct: 111 RGKSAVEFLSKLLPSSLSSMKAYSSTLSVIMNEKGGILDDCLITRWGEQDWYLVTNAGRR 170
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLSS 368
D+ + + F S LQ + GL+A+QGP +S ILQ R LD S
Sbjct: 171 DSDLAWIDKIRQEFPS----DSLQMDILDGWGLLALQGPKASKILQPLLDDRSLSLD-QS 225
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
L+F S +AG + R+GYTGEDG EISVP E L V L GL ARD
Sbjct: 226 LFFGQSIHTKVAGTEVHIARSGYTGEDGFEISVPPTDALGFAELLAKQPGVTLTGLAARD 285
Query: 429 SL 430
SL
Sbjct: 286 SL 287
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 16 RETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPS 74
+E GF G +++ + R+R G T G P R G I ++N Q VG +TSG PSPS
Sbjct: 317 KERSGFFGEGRTRAEKGELIKRRRVGLTVEKGPPARSGALITDSNGQEVGVVTSGIPSPS 376
Query: 75 LK-KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
L +NIAM Y+ K G ++ V VR K +V KMPFVKSNYY
Sbjct: 377 LAGQNIAMAYVSSGLHKPGSKVNVLVRGKPRQAEVVKMPFVKSNYY 422
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 470 GLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 524
GL+A+QGP +S ILQ R LD SL+F S +AG + R+GYTGEDG EI
Sbjct: 198 GLLALQGPKASKILQPLLDDRSLSLD-QSLFFGQSIHTKVAGTEVHIARSGYTGEDGFEI 256
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
SVP E L V L GL ARDSL
Sbjct: 257 SVPPTDALGFAELLAKQPGVTLTGLAARDSL 287
>gi|366988427|ref|XP_003673980.1| hypothetical protein NCAS_0A10410 [Naumovozyma castellii CBS 4309]
gi|342299843|emb|CCC67599.1| hypothetical protein NCAS_0A10410 [Naumovozyma castellii CBS 4309]
Length = 406
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 131/240 (54%), Gaps = 13/240 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYDLH+ G MVPFAG+SMP+ Y + SH TR+ +FDVSHMLQ+ + G
Sbjct: 27 KKTPLYDLHVQLGATMVPFAGYSMPLIYKDQTHIESHNWTRNNAGLFDVSHMLQSKLVGP 86
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLF-LVSNASRRKV 315
+L I D L G LS+F N +GGI DD I++K D F +V+NA R K
Sbjct: 87 GSVSFLNRITPTDFGALPRGYSHLSVFLNHEGGIIDDTIISKNCNDDDFTMVTNAGRVKE 146
Query: 316 DMDLMVAAQDRFKSLGKDIHL--QFLSAEERGLIAVQGPLSSTILQ--RHTDLDLSSLYF 371
D + KS K H + S +R L+A+QGP S IL+ L++ +F
Sbjct: 147 DSTFL-------KSELKLCHFDCNWESVNDRALLALQGPKSKDILEPLLMEGQTLTNFFF 199
Query: 372 MTSRPCTI-AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ + G+ ++R+GYTGEDG E+SVP + + LL + VK GL ARDSL
Sbjct: 200 GERKLFQLYNGVTIDISRSGYTGEDGFEMSVPEKNASEFASLLLDNSTVKPIGLAARDSL 259
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 3 IYSRLLIFPGKRRR----ETGGFPGASIIQSQIKSGVSRK-RTGF--TSTGVPIRPGYEI 55
+ +RL K RR E F G I +Q+ K R GF T G R G I
Sbjct: 279 VEARLNWIISKTRRNLPQENERFNGYEKIMTQLNEKKYEKLRVGFKYTKKGPAARTGSLI 338
Query: 56 FNAND-QRVGAITSGCPSPSLKK-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPF 113
F+++ +VG +TSG SPSL NI GY++ K G EL+V+VR+K +++ KMP
Sbjct: 339 FSSDGITQVGIVTSGSASPSLNNINIGQGYVDTGMHKNGSELFVQVRNKLFPIEIVKMPI 398
Query: 114 VKSNYY 119
V +NYY
Sbjct: 399 VPTNYY 404
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 465 SPEERGLIAVQGPLSSTILQ--RHTDLDLSSLYFMTSRPCTI-AGIPCTLTRAGYTGEDG 521
S +R L+A+QGP S IL+ L++ +F + + G+ ++R+GYTGEDG
Sbjct: 166 SVNDRALLALQGPKSKDILEPLLMEGQTLTNFFFGERKLFQLYNGVTIDISRSGYTGEDG 225
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
E+SVP + + LL + VK GL ARDSL
Sbjct: 226 FEMSVPEKNASEFASLLLDNSTVKPIGLAARDSL 259
>gi|251736945|gb|ACT10334.1| glycine cleavage system T protein [Sinorhizobium fredii]
Length = 387
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 132/239 (55%), Gaps = 16/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
+ TPL+ LHLS G +MVPFAG+ MPVQY + HLHTR+ +FDVSHM Q +
Sbjct: 16 KHTPLHALHLSLGARMVPFAGYEMPVQY-PEGVLKEHLHTRAAAGLFDVSHMGQIAIRPK 74
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G+ + L E + DV L G+ LFTN +GGI DDL++ D LFLV NA+
Sbjct: 75 SGRIADAALALEKLVPVDVLGLAEGRQRYGLFTNPEGGILDDLMIANR-GDHLFLVVNAA 133
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + LG + L ++R L+A+QGP + +L D++S+ F
Sbjct: 134 CKDADHAHLK------DGLGDACDVTLL--DDRALVALQGPRAEAVLCELW-ADVASMRF 184
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + + C ++R+GYTGEDG EIS+P + + LL DV GLGARDSL
Sbjct: 185 MDLAEADLHDVACIISRSGYTGEDGFEISIPTASAVDVTQRLLEHPDVLAIGLGARDSL 243
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRV--GAITSGCPSPS 74
GGFPGA I +++ G R+R G G P+R G ++F D V G++TSG PS
Sbjct: 282 AGGFPGADRILAELAGGTDRRRVGLKPEGRAPVRGGAKLFTDPDGTVLVGSVTSGGFGPS 341
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+E A+++ G +L+ VR K + + V+ +PFVK Y
Sbjct: 342 VDCPVAMGYVETAHARNGTKLFAEVRGKYLPITVSALPFVKQTY 385
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L+A+QGP + +L D++S+ FM + + C ++R+GYTGEDG EIS+
Sbjct: 156 DDRALVALQGPRAEAVLCELW-ADVASMRFMDLAEADLHDVACIISRSGYTGEDGFEISI 214
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + LL DV GLGARDSL
Sbjct: 215 PTASAVDVTQRLLEHPDVLAIGLGARDSL 243
>gi|103487355|ref|YP_616916.1| glycine cleavage system aminomethyltransferase T [Sphingopyxis
alaskensis RB2256]
gi|98977432|gb|ABF53583.1| glycine cleavage system T protein [Sphingopyxis alaskensis RB2256]
Length = 374
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 12/231 (5%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE 259
PL H + GG+MV FAG+ MP+QY I A HL TR +FDVSHM Q ++G+
Sbjct: 15 PLDAWHRAKGGRMVAFAGYWMPIQYD--GIMAEHLWTRENAGLFDVSHMGQLALSGEGVA 72
Query: 260 EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDL 319
+ LE++ D+ L PG+ SL N++GG+ DDL++T D +V N + + D+
Sbjct: 73 KALETLVPGDISALKPGRMRYSLLLNDEGGVLDDLMITNE-GDQFGIVVNGAVKWDDI-- 129
Query: 320 MVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 379
A R + L DI L E+ GL+A+QGP + T L R + + L FM + P T
Sbjct: 130 ---AHLR-EHLPDDITLNH--NEDYGLLALQGPKAVTALARLVP-EAADLVFMQAMPATW 182
Query: 380 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EIS+P + +AL + E+VK GLGARDSL
Sbjct: 183 NGHAIAISRSGYTGEDGFEISLPNDALESFADALCAMEEVKPIGLGARDSL 233
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPGA+ I + G RKR G G +P+R G ++F+ N + +G +TSG
Sbjct: 263 KRRREEGGFPGAARILGHLADGSPRKRVGLVIDGKLPVREGAKLFDGNTE-IGVVTSGGF 321
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+PS+ IAMGY+ S+ G + VR KRV VT MPF+ Y
Sbjct: 322 APSVGAPIAMGYVPTGLSEPGTAVAAEVRGKRVACTVTAMPFIPHRY 368
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+ GL+A+QGP + T L R + + L FM + P T G ++R+GYTGEDG EIS+
Sbjct: 146 EDYGLLALQGPKAVTALARLVP-EAADLVFMQAMPATWNGHAIAISRSGYTGEDGFEISL 204
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + +AL + E+VK GLGARDSL
Sbjct: 205 PNDALESFADALCAMEEVKPIGLGARDSL 233
>gi|218295168|ref|ZP_03496004.1| glycine cleavage system T protein [Thermus aquaticus Y51MC23]
gi|218244371|gb|EED10896.1| glycine cleavage system T protein [Thermus aquaticus Y51MC23]
Length = 349
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 129/232 (55%), Gaps = 9/232 (3%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPLY HL HGG+MV FAG ++P+QY SI HL R K +FDVSHM + ++ G+
Sbjct: 4 TPLYQAHLRHGGRMVAFAGCALPLQY--TSIVEEHLAVRRKAGLFDVSHMGEFLIRGEEA 61
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+L+ V DV +L G+ S+ +E+GG+ DD+ + + E +V NA+ D+D
Sbjct: 62 LPFLQWATVNDVGKLKVGRAQYSMLPSERGGVVDDIYLYRLGEAVYLMVVNAANIAKDLD 121
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ A F+ +D+ +E L+A+QGP ++ ILQ T DLS+
Sbjct: 122 HLKALARGFRVEVEDV------SEATALLALQGPEAAAILQSLTGADLSARRKNDVFEAQ 175
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG P L R GYTGEDG E+ + E I EALL+ + GLGARD+L
Sbjct: 176 VAGRPARLARTGYTGEDGFELFLAPEDAEAIFEALLA-AGARPCGLGARDTL 226
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 450 DRFKSLGKDIHLQFLS-PEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP 508
D K+L + ++ E L+A+QGP ++ ILQ T DLS+ +AG P
Sbjct: 121 DHLKALARGFRVEVEDVSEATALLALQGPEAAAILQSLTGADLSARRKNDVFEAQVAGRP 180
Query: 509 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
L R GYTGEDG E+ + E I EALL+ + GLGARD+L
Sbjct: 181 ARLARTGYTGEDGFELFLAPEDAEAIFEALLA-AGARPCGLGARDTL 226
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 28 QSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEP 86
++ + S K G TG+P R GY + + VG +TSG SP L+K IA+ Y+E
Sbjct: 264 EAMLASPCREKLVGLVLETGIP-REGYAVLSEKGP-VGRVTSGGYSPLLEKGIALAYVE- 320
Query: 87 AYSKVGVELWVRVRDKRVDVKVTKMPFV 114
+ +V VR + V ++ +PFV
Sbjct: 321 --KEAEGPFFVEVRGRAVPASISPLPFV 346
>gi|20806817|ref|NP_621988.1| glycine cleavage system aminomethyltransferase T
[Thermoanaerobacter tengcongensis MB4]
gi|254478933|ref|ZP_05092294.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM
12653]
gi|24636853|sp|Q8RCV9.1|GCST_THETN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|20515282|gb|AAM23592.1| Glycine cleavage system T protein (aminomethyltransferase)
[Thermoanaerobacter tengcongensis MB4]
gi|214035115|gb|EEB75828.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM
12653]
Length = 374
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 156/290 (53%), Gaps = 26/290 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+++ + K++ FAG++MPVQ+ SI + H R+ +FDVSHM + +V GK
Sbjct: 11 KKTPLYEIYPKYNAKIIDFAGWAMPVQFE--SIISEHEAVRNAAGLFDVSHMGEIIVKGK 68
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+++ D+ +L+ + + N GG+ DDL+V K + LV NA+ + D
Sbjct: 69 DAFPFLQNLLTNDLSKLNDNQVLYTFMCNHNGGVIDDLLVYKYSNNYYLLVVNAANIEKD 128
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M+ +K + ++ +S ++ +A+QGP + ILQ+ TD DLS + +F
Sbjct: 129 YKWMLNNAGIYK-----VEIENVS-DKIAELAIQGPKAEEILQKLTDEDLSQIKFFYFKD 182
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSG 432
IAG+ C ++R GYTGEDG EI +P E + E +L D +K AGLGARD+L
Sbjct: 183 KVKIAGVECLVSRTGYTGEDGFEIYMPNEHAVTLWEKILEAGKDYGLKPAGLGARDTLRF 242
Query: 433 DITLN----------TPVPHG-SLKLSNDRFKSLGKDIHLQFLSPEERGL 471
+ L TP+ G + D+ +GKD L +E+GL
Sbjct: 243 EAGLPLYGNELGEDITPLEAGLGFFVKFDKGNFIGKD---ALLKQKEQGL 289
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + ILQ+ TD DLS + +F IAG+ C ++R GYTGEDG EI +P E
Sbjct: 153 LAIQGPKAEEILQKLTDEDLSQIKFFYFKDKVKIAGVECLVSRTGYTGEDGFEIYMPNEH 212
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E +L D +K AGLGARD+L
Sbjct: 213 AVTLWEKILEAGKDYGLKPAGLGARDTL 240
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSP 73
+ + G F G + Q + G+ RK GF G I R GYE+ A++Q++G +T+G SP
Sbjct: 269 KFDKGNFIGKDALLKQKEQGLKRKLVGFEMIGNGIPRHGYEV-QADNQKIGYVTTGYFSP 327
Query: 74 SLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
+LKKNI + I+ Y+++G ++ V +R+K
Sbjct: 328 TLKKNIGLALIDSKYAQIGNQIEVIIRNK 356
>gi|194377664|dbj|BAG57780.1| unnamed protein product [Homo sapiens]
Length = 306
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 113/173 (65%), Gaps = 10/173 (5%)
Query: 262 LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMV 321
+ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D+ LM
Sbjct: 1 MESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDLALM- 59
Query: 322 AAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 60 --QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAVME 114
Query: 379 IAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 115 VFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 167
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 196 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 255
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 256 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 304
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 56 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 112
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 113 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 167
>gi|332188379|ref|ZP_08390104.1| glycine cleavage system T protein [Sphingomonas sp. S17]
gi|332011608|gb|EGI53688.1| glycine cleavage system T protein [Sphingomonas sp. S17]
Length = 391
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 130/241 (53%), Gaps = 18/241 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q PL H + GG+MVPFAG+ MPVQY I A HL TR +FDVSHM Q V TG+
Sbjct: 20 QTLPLDAWHRARGGRMVPFAGYHMPVQY--EGIMAEHLWTREAAGLFDVSHMGQVVFTGE 77
Query: 257 HRE----EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLED---SLFLVSN 309
+ LE + D+ L K SL NE+GGI DDL+VTK + D L++V N
Sbjct: 78 NGLGPVITALEKVLPGDITGLGDRKNRYSLLLNEEGGILDDLMVTKRILDGAEELYMVVN 137
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
+ + D+ + + D L L +E+ L+A+QGP + L R + +L
Sbjct: 138 GATKYDDIAYL------LDFIPDDATLNLL--DEQALLALQGPKAVDALSRIVS-GVENL 188
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FMT+ T +P ++R+GYTGEDG EIS+P E + L +VK GLGARDS
Sbjct: 189 VFMTAADFTWDDVPLWISRSGYTGEDGYEISIPAEHAAAFADLLCEQAEVKPIGLGARDS 248
Query: 430 L 430
L
Sbjct: 249 L 249
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E+ L+A+QGP + L R + +L FMT+ T +P ++R+GYTGEDG EIS+
Sbjct: 162 DEQALLALQGPKAVDALSRIVS-GVENLVFMTAADFTWDDVPLWISRSGYTGEDGYEISI 220
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + L +VK GLGARDSL
Sbjct: 221 PAEHAAAFADLLCEQAEVKPIGLGARDSL 249
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
K+RRE F GA I ++ +SG + KR G T G P+R G + + +G +TSG
Sbjct: 279 KKRREAADFLGAERILAERESGPAVKRVGLTVAGRQPVREGASVVAEDGSVIGRVTSGGF 338
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+PS+ IAM Y+ + G L + R K D VT MPFV Y
Sbjct: 339 APSMGAPIAMAYVPTELAAPGTALKLLQRGKTHDATVTAMPFVPHRY 385
>gi|291393683|ref|XP_002713228.1| PREDICTED: aminomethyltransferase isoform 2 [Oryctolagus cuniculus]
Length = 347
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 112/182 (61%), Gaps = 4/182 (2%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKIFGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGYLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A D+ LM ++ G D+ L+ + + L+A+QGP ++ +LQ DL L
Sbjct: 90 AGCWDKDLALMQNKVRELQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVAHDLRKL 146
Query: 370 YFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
FMTS + G+ C +TR GYTGEDG+EISVP + A L + +VKLAGL ARD
Sbjct: 147 PFMTSAVMEVFGVAGCRVTRCGYTGEDGMEISVPAPGAVRLATAFLENPEVKLAGLAARD 206
Query: 429 SL 430
SL
Sbjct: 207 SL 208
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 68/109 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N R+G +TSGCP
Sbjct: 237 GKRRRAAMDFPGAEVIVPQLKGKVQRRRVGLMCEGAPMRAHSPILNVEGTRIGTVTSGCP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 297 SPCLKKNVAMGYVPLEYSRPGTPLLVEVRRKQQMAVVSKMPFVPTNYYT 345
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L ++ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQNKVRELQNKGSDVGLEVV---DNALLALQGPTAAQVLQAGVAHDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDG+EISVP + A L + +VKLAGL ARDSL
Sbjct: 154 MEVFGVAGCRVTRCGYTGEDGMEISVPAPGAVRLATAFLENPEVKLAGLAARDSL 208
>gi|329888291|ref|ZP_08266889.1| glycine cleavage system T protein [Brevundimonas diminuta ATCC
11568]
gi|328846847|gb|EGF96409.1| glycine cleavage system T protein [Brevundimonas diminuta ATCC
11568]
Length = 349
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 117/219 (53%), Gaps = 12/219 (5%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MV F G+ MPVQY V A H TR +FDVSHM Q +TG E D
Sbjct: 1 MVGFGGYDMPVQYEGV--LAEHRWTREHAGLFDVSHMGQARITGADAIAQFERFVPGDYA 58
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG 331
+ PGK SL N QGGI DDL+ K ED L++V NA + D + A +L
Sbjct: 59 IVKPGKQKYSLLLNGQGGIMDDLMAGKPFEDGLYVVVNAGNKDADFAFLNA------NLS 112
Query: 332 KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 391
D L+ L +R L+A+QGP ++ ++ +H + L + FM R ++ C ++R+GY
Sbjct: 113 GDAKLEVL---DRALLAIQGPEAAEVMAKH-EPALGDMGFMDCRTISLFDEDCIVSRSGY 168
Query: 392 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
TGEDG EISVP + LL+D VK GLGARDSL
Sbjct: 169 TGEDGYEISVPAAAAERVWNLLLTDARVKPVGLGARDSL 207
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQRVGAITSGCP 71
K R+E F GA +I Q+ +R R G G P R G EI +A+ +G ITSG P
Sbjct: 237 KSRKERADFAGADVILKQLAESPARVRVGLHVKEGAPAREGAEIADADGVVIGKITSGGP 296
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
SP+L NIAMGY+ PA++++G L V VR + +V PFV + YY PK
Sbjct: 297 SPTLGHNIAMGYVPPAFAELGTVLKVLVRGRPAAAEVIATPFVATRYYRKPK 348
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L D L+ L +R L+A+QGP ++ ++ +H + L + FM R ++ C ++R
Sbjct: 110 NLSGDAKLEVL---DRALLAIQGPEAAEVMAKH-EPALGDMGFMDCRTISLFDEDCIVSR 165
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+GYTGEDG EISVP + LL+D VK GLGARDSL
Sbjct: 166 SGYTGEDGYEISVPAAAAERVWNLLLTDARVKPVGLGARDSL 207
>gi|71411618|ref|XP_808051.1| glycine cleavage T-protein [Trypanosoma cruzi strain CL Brener]
gi|70872174|gb|EAN86200.1| glycine cleavage T-protein, putative [Trypanosoma cruzi]
Length = 373
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 135/241 (56%), Gaps = 10/241 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L+ LHLS +M FAG+ MP+ Y + HLHTR +FDVSH+ V G
Sbjct: 6 RRTVLHSLHLSRKARMGSFAGYDMPIHYPP-GVVQEHLHTRQAAGLFDVSHVGFFEVRGA 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R ++ E + + V EL G+ L+LF NE GG++DD IV+K + L +++ + K+
Sbjct: 65 DRHKFFEWVTPSGVTELQDGQSALTLFMNESGGVKDDCIVSKYSDHLLAVINAGCKGKII 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS-R 375
L +DR D L L +R ++++QGP +++++ + +L + FM R
Sbjct: 125 THL----KDRLAEFKGDATLVEL---DRAMVSLQGPKAASVMAPFVE-ELDRVKFMWGRR 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
+ GI TLTR Y+GEDG +I VP + VE LL + DV+LAGLGARDSL +
Sbjct: 177 SVCVKGIDITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQNPDVQLAGLGARDSLRTEAG 236
Query: 436 L 436
L
Sbjct: 237 L 237
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 449 NDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR-PCTIAGI 507
DR D L L +R ++++QGP +++++ + +L + FM R + GI
Sbjct: 128 KDRLAEFKGDATLVEL---DRAMVSLQGPKAASVMAPFVE-ELDRVKFMWGRRSVCVKGI 183
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TLTR Y+GEDG +I VP + VE LL + DV+LAGLGARDSL
Sbjct: 184 DITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQNPDVQLAGLGARDSL 231
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQS---QIKSGVSRKRTGFTST--GVPIRPGYEIFN 57
+ +RL+ KRR GGF G +Q+ + K V R R G S G R G I
Sbjct: 251 VAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKELVPRLRMGILSVARGPVARTGMPIL- 309
Query: 58 ANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSN 117
D VG +TSG PSP+L +NIAMGYI+ A ++ G + + VR KR+ +VT FV
Sbjct: 310 VGDVVVGEVTSGVPSPTLSRNIAMGYIDRAKARAGETVELEVRGKRLPGEVTLPRFVPQR 369
Query: 118 YY 119
YY
Sbjct: 370 YY 371
>gi|152996304|ref|YP_001341139.1| glycine cleavage system T protein [Marinomonas sp. MWYL1]
gi|150837228|gb|ABR71204.1| glycine cleavage system T protein [Marinomonas sp. MWYL1]
Length = 366
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 130/234 (55%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L DLH++ G +MV FAG+ MPVQY + + HL TR V +FDVSHM Q ++ G+
Sbjct: 2 KRTALCDLHIASGARMVEFAGYEMPVQY-PLGVMKEHLWTRENVGLFDVSHMGQVILRGE 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + LE+I DV L G +FT E GGI DDL++ E+ +F+V NA ++ D
Sbjct: 61 NLKAKLEAILPVDVLGLAEGMQRYGMFTTENGGITDDLMLANWGEE-VFMVVNAGCKEQD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A ++R L+A+QGP + + R D S++ FM S
Sbjct: 120 FAYLKATLVDCDV---------DVIDDRALLAIQGPKAREVFARMVP-DASTMKFMQSLK 169
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G+ ++ +GYTGEDG E+SVP + ALL+ ++V+ GLGARDSL
Sbjct: 170 FEWLGVELWVSCSGYTGEDGYEVSVPNDHAEAFANALLAFDEVEWIGLGARDSL 223
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 14 RRRE---TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSG 69
RR E GGFPGA +I Q + RKR GF G P+R G EI +A+ + G +TSG
Sbjct: 255 RRLEGDRAGGFPGADVILPQFTNKPVRKRAGFLVDGRAPVREGVEIVDASGEVKGVVTSG 314
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSL + I M YI G L+ VR K + +K MPFV S YY
Sbjct: 315 GFSPSLAQPIVMAYISTQALDSGEPLFANVRGKSIPLKQAAMPFVPSRYY 364
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
R L+A+QGP + + R D S++ FM S G+ ++ +GYTGEDG E+SVP
Sbjct: 138 RALLAIQGPKAREVFARMVP-DASTMKFMQSLKFEWLGVELWVSCSGYTGEDGYEVSVPN 196
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
+ ALL+ ++V+ GLGARDSL
Sbjct: 197 DHAEAFANALLAFDEVEWIGLGARDSL 223
>gi|164656126|ref|XP_001729191.1| hypothetical protein MGL_3658 [Malassezia globosa CBS 7966]
gi|159103081|gb|EDP41977.1| hypothetical protein MGL_3658 [Malassezia globosa CBS 7966]
Length = 373
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 134/236 (56%), Gaps = 20/236 (8%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPF G+SMP+ Y V ASH H R +FDV HM+Q + G +L+ I A +
Sbjct: 1 MVPFGGYSMPLTYEGVGQVASHKHVREHAGLFDVGHMVQHMFEGPTALAFLQHITPASLS 60
Query: 272 E--LDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM----DLMVAAQD 325
L+ TLS+ +++GGI DDLI+TK + S ++V+NA RR D+ + + D
Sbjct: 61 NTALESFSSTLSVLLSKEGGILDDLIITKHSDTSFYVVTNAGRRTEDLAWIEEQLREWND 120
Query: 326 RFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTIA--- 380
KS G+ H E +GL+A+QGP S+ +L + +D DL++L F S ++
Sbjct: 121 AHKSEGETTHRVM---EGQGLVALQGPSSAAVLAKLVPSDFDLATLTFGRSAMIALSMKG 177
Query: 381 ------GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ C ++R GYTGEDG EIS+P E + +A+L + +V+LAGL ARDSL
Sbjct: 178 DGSGNERVLCHVSRGGYTGEDGFEISIPAEATETVTQAILDNPEVQLAGLAARDSL 233
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGF-TSTGVPIRPGYEIFNANDQ-RVGAITSG 69
GK RR TG F GA + ++K G R+R G S G P R G ++F + + +G ITSG
Sbjct: 262 GKDRRVTGDFLGAERVLRELKEGPPRRRVGLLVSPGSPAREGTKVFTPDGKTHIGRITSG 321
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
PSP+L +NIAM ++ + K L V VR+K + VT++PFV + +Y
Sbjct: 322 IPSPTLGQNIAMALVQNGHHKKDTPLLVEVRNKMREATVTRLPFVPNKFY 371
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 14/122 (11%)
Query: 445 LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPC 502
L+ ND KS G+ H E +GL+A+QGP S+ +L + +D DL++L F S
Sbjct: 115 LREWNDAHKSEGETTHRVM---EGQGLVALQGPSSAAVLAKLVPSDFDLATLTFGRSAMI 171
Query: 503 TIA---------GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 553
++ + C ++R GYTGEDG EIS+P E + +A+L + +V+LAGL ARD
Sbjct: 172 ALSMKGDGSGNERVLCHVSRGGYTGEDGFEISIPAEATETVTQAILDNPEVQLAGLAARD 231
Query: 554 SL 555
SL
Sbjct: 232 SL 233
>gi|381190252|ref|ZP_09897775.1| glycine cleavage system aminomethyltransferase T [Thermus sp. RL]
gi|380451845|gb|EIA39446.1| glycine cleavage system aminomethyltransferase T [Thermus sp. RL]
Length = 349
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 130/235 (55%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ HL G +MV FAG+ +P+QY SI HL R VFDVSHM + +V G+
Sbjct: 2 KKTPLYEAHLRLGARMVDFAGYLLPLQY--TSIVEEHLAVRRAAGVFDVSHMGEFLVRGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ V D +L G+ S+ NE+GG+ DD+ + + E+ +V NA+ D
Sbjct: 60 EALAFLQWATVNDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ ++L K ++ A ER L+A+QGP ++++LQ +LDLS
Sbjct: 120 L-------AHLQALAKGFRVELEDASERTALLALQGPKAASLLQGLXNLDLSQKRKNDVF 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
P +AG P L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 173 PARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 452 FKSLGKDIHLQFLSPEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
++L K ++ ER L+A+QGP ++++LQ +LDLS P +AG P
Sbjct: 123 LQALAKGFRVELEDASERTALLALQGPKAASLLQGLXNLDLSQKRKNDVFPARVAGRPAR 182
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 183 LARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 46 GVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE--LWVRVRDKR 103
G+P R GY + + + VG +TSG SP L++ IA+ Y+E G E V VR +
Sbjct: 283 GIP-REGYRVLSGG-RPVGRVTSGGYSPLLQRGIALAYVEE-----GAEGPFQVEVRGRA 335
Query: 104 VDVKVTKMPFV 114
V ++ +PFV
Sbjct: 336 VPAALSPLPFV 346
>gi|282856321|ref|ZP_06265601.1| aminomethyltransferase [Pyramidobacter piscolens W5455]
gi|282585824|gb|EFB91112.1| aminomethyltransferase [Pyramidobacter piscolens W5455]
Length = 368
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 129/238 (54%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTP+Y+ H++ GG+MV F G+ +PVQY A I HL+ R+K +FDVSHM + V G
Sbjct: 2 KRTPMYECHVAAGGRMVDFGGWELPVQYEATGIKTEHLNVRAKAGLFDVSHMGEVTVVGP 61
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E W+ S+ DV E+ G+ ++ GG+ DDL+V + ++ LV NA+ + D
Sbjct: 62 KAEAWISSLVTNDVAEMHDGQVQYNIMCTPTGGVVDDLLVYRYNKERYLLVINAANVEKD 121
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
D K ++ +AE +A+QGP + IL++ D D ++L +F
Sbjct: 122 WAWF---NDHLTDGVKIENISMQTAE----VALQGPNAEAILRKIVDFDPATLEFFHFKD 174
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISV---PGEQCTHIVEALLSDEDVKLAGLGARDSL 430
P + GI ++R GYTGEDG EI V G + +IV D + GLGARDSL
Sbjct: 175 PVDVKGIKAIVSRTGYTGEDGFEIYVDWSKGAELWNIVMEAGKDLGLMPIGLGARDSL 232
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV---P 527
+A+QGP + IL++ D D ++L +F P + GI ++R GYTGEDG EI V
Sbjct: 145 VALQGPNAEAILRKIVDFDPATLEFFHFKDPVDVKGIKAIVSRTGYTGEDGFEIYVDWSK 204
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
G + +IV D + GLGARDSL
Sbjct: 205 GAELWNIVMEAGKDLGLMPIGLGARDSL 232
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 17 ETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPS 74
+ GGF G +++ Q G+ RK GVP R E+ + + +G +T+G PS
Sbjct: 264 KAGGFIGQPVLKQQKADGLKRKIVAAKLIDKGVP-RHEMEVADKDGNIIGVVTTGGYGPS 322
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
L N+A + VG LW+ +R K +V K PF K +Y
Sbjct: 323 LDANLANCLVNVPAPAVGENLWIMIRGKAKKAEVVKKPFYKKSY 366
>gi|384430717|ref|YP_005640077.1| aminomethyltransferase [Thermus thermophilus SG0.5JP17-16]
gi|333966185|gb|AEG32950.1| Aminomethyltransferase [Thermus thermophilus SG0.5JP17-16]
Length = 349
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 131/235 (55%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ HL G +MV FAG+ +P+QY SI HL R VFDVSHM + +V G+
Sbjct: 2 KKTPLYEAHLRLGARMVDFAGYLLPLQY--TSIVEEHLAVRRAAGVFDVSHMGEFLVRGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ V D +L G+ S+ NE+GG+ DD+ + + E+ +V NA+ D
Sbjct: 60 EALAFLQWATVNDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ ++L K ++ A ER L+A+QGP ++++LQ D+DLS+
Sbjct: 120 L-------AHLQALAKGFRVELEDASERTALLALQGPKAASLLQGLVDVDLSTKRKNDVF 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
P +AG P L R GYTGEDG E+ + E + AL+ + K AGLGARD+L
Sbjct: 173 PARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDTL 226
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 452 FKSLGKDIHLQFLSPEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
++L K ++ ER L+A+QGP ++++LQ D+DLS+ P +AG P
Sbjct: 123 LQALAKGFRVELEDASERTALLALQGPKAASLLQGLVDVDLSTKRKNDVFPARVAGRPAR 182
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
L R GYTGEDG E+ + E + AL+ + K AGLGARD+L
Sbjct: 183 LARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDTL 226
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 46 GVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE--LWVRVRDKR 103
G+P R GY + + + VG +TSG SP L++ IA+ Y+E G E V VR +
Sbjct: 283 GIP-REGYRVLSGG-RPVGRVTSGGYSPLLQRGIALAYVEE-----GAEGPFQVEVRGRA 335
Query: 104 VDVKVTKMPFV 114
V ++ +PFV
Sbjct: 336 VPAALSPLPFV 346
>gi|329896457|ref|ZP_08271535.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma
proteobacterium IMCC3088]
gi|328921775|gb|EGG29147.1| Aminomethyltransferase (glycine cleavage system T protein) [gamma
proteobacterium IMCC3088]
Length = 369
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 131/234 (55%), Gaps = 15/234 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
PL LH + G K+VPFAG++MPVQY I HLHTR+ +FDVSHM Q VV+G+
Sbjct: 6 VPLESLHQTLGAKLVPFAGYNMPVQY-PTGIIKEHLHTRTAAGLFDVSHMGQVVVSGEGV 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LE++ AD+ L T SL TNE GG+ DDLIVT+ D LV NA + D+
Sbjct: 65 VSALEALMPADLEGLAVNAQTYSLLTNEAGGVIDDLIVTRWAADQFMLVINAGCKDKDL- 123
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL--DLSSLYFMTSRP 376
+ +S ++L+ LS + L+A+QGP + ++ DL + +L FMT
Sbjct: 124 ------EHLRSHLASVNLEVLS--QHSLLALQGPKARAVM---NDLLPETQNLVFMTGTW 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G +T +GYTGEDG EISVP + + LL+ DV GLGARDSL
Sbjct: 173 AQFEGEQVYVTCSGYTGEDGFEISVPNSHVEALAQKLLAHADVLPIGLGARDSL 226
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 14 RRRE---TGGFPGASIIQSQIKSGVSRKRTGFTSTGV-PIRPGYEIFNANDQRVGAITSG 69
RR E GG+ G++II++Q G R G G P+R G +F+A Q+VG + SG
Sbjct: 258 RRHEGARAGGYLGSAIIEAQWAEGTDTVRVGLKVLGKRPVREGAVVFDAQQQQVGTVCSG 317
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+L++ +AM Y+ + +G L+ VR K V+V+V K PFV Y+
Sbjct: 318 GFGATLEQPVAMAYVNADQAALGTHLFADVRGKLVEVEVAKTPFVAQRYF 367
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDL--DLSSLYFMTSRPCTIAGI 507
+ +S ++L+ LS + L+A+QGP + ++ DL + +L FMT G
Sbjct: 124 EHLRSHLASVNLEVLS--QHSLLALQGPKARAVM---NDLLPETQNLVFMTGTWAQFEGE 178
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+T +GYTGEDG EISVP + + LL+ DV GLGARDSL
Sbjct: 179 QVYVTCSGYTGEDGFEISVPNSHVEALAQKLLAHADVLPIGLGARDSL 226
>gi|110347067|ref|YP_665885.1| glycine cleavage system T protein [Chelativorans sp. BNC1]
gi|110283178|gb|ABG61238.1| glycine cleavage system T protein [Chelativorans sp. BNC1]
Length = 380
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 141/269 (52%), Gaps = 25/269 (9%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL + HGGKMVPFAG+ MPVQ+ + HL+ R+ +FDVSHM Q ++ K
Sbjct: 8 RQTPLTAFNRGHGGKMVPFAGYEMPVQF-PDGVLKEHLYCRAASGLFDVSHMGQVLLRPK 66
Query: 257 H-REE----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
R E LE + DV L G+ LFT E GGI DDL++ D LFLV NA+
Sbjct: 67 SGRIEDAALALERLVPVDVLGLKSGRQRYGLFTAEDGGILDDLMIANR-GDHLFLVVNAA 125
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D+ + LG D ++ L+ +R LIA+QGP + L +++ ++
Sbjct: 126 CKAQDVAHF------WAHLGNDCEVEELT--DRVLIALQGPDAEAALAVLAP-EVAKMHA 176
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL- 430
M + G PC + RAGYTGEDG EIS+P + EALL DE V+ GLGARD L
Sbjct: 177 MEVADVNLLGTPCIVARAGYTGEDGYEISLPASHAVALAEALLEDERVRPVGLGARDCLR 236
Query: 431 --------SGDITLNTPVPHGSLKLSNDR 451
DI T G+L+ + R
Sbjct: 237 LEAGMCLYGHDIDTTTTPAQGALEWAIQR 265
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
+ LG D ++ L+ +R LIA+QGP + L +++ ++ M + G PC +
Sbjct: 135 WAHLGNDCEVEELT--DRVLIALQGPDAEAALAVLAP-EVAKMHAMEVADVNLLGTPCIV 191
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
RAGYTGEDG EIS+P + EALL DE V+ GLGARD L
Sbjct: 192 ARAGYTGEDGYEISLPASHAVALAEALLEDERVRPVGLGARDCL 235
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAITSGCPSPS 74
GGFPGA I +++ G R+R G G PI G +F + VG +TSG P+
Sbjct: 274 AGGFPGAETILKELERGAFRRRVGLRIDGRAPICEGTALFADEVGGEPVGQVTSGGFGPA 333
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ ++AM ++ A S L+ VR KR+ V+ +PF+K Y
Sbjct: 334 VNASVAMAHVPTALSAADTPLFAEVRGKRLRFFVSPLPFIKQRY 377
>gi|429206990|ref|ZP_19198250.1| Aminomethyltransferase (glycine cleavage system T protein)
[Rhodobacter sp. AKP1]
gi|428189985|gb|EKX58537.1| Aminomethyltransferase (glycine cleavage system T protein)
[Rhodobacter sp. AKP1]
Length = 377
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 134/238 (56%), Gaps = 15/238 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R PL+DLH+ GG+MVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q ++ +
Sbjct: 9 RRLPLHDLHVRLGGRMVPFAGWEMPVQYPA-GVMKEHLHTRTAAGLFDVSHMGQLLLRPR 67
Query: 257 HREEWL----ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
L E + DV L G+ + TNE GGI+DDL+ D L++V NA+
Sbjct: 68 GGMAALGAAFERLMPVDVLGLAEGRQRYGILTNETGGIRDDLMFANR-GDHLYVVVNAAC 126
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
D + AA LG + ++ ++RGL+A+QGP + +L +++ FM
Sbjct: 127 VAEDTAHLRAA------LGDAA--EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFM 177
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP E T EALL+ E+V GLGARDSL
Sbjct: 178 DVIAADWQGAELWISRSGYTGEDGFEISVPVEAITAFAEALLAREEVAPIGLGARDSL 235
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSG 69
PG R GGF G I + +++G R R G + +G P+R G E+F + VG +TSG
Sbjct: 269 PGGTR--AGGFAGDQRILADLEAGPERLRVGLSPSGRAPMREGTELFTPDGTPVGRVTSG 326
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PS++ IAMGY+ +++ G L VR KR+ V V +PF S Y
Sbjct: 327 GFGPSVEAPIAMGYVATSHAAPGTGLMGEVRGKRLPVTVVDLPFRPSTY 375
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
+ ++ ++RGL+A+QGP + +L +++ FM G ++R+GYTGEDG
Sbjct: 143 EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFMDVIAADWQGAELWISRSGYTGEDG 201
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP E T EALL+ E+V GLGARDSL
Sbjct: 202 FEISVPVEAITAFAEALLAREEVAPIGLGARDSL 235
>gi|414160904|ref|ZP_11417167.1| aminomethyltransferase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876583|gb|EKS24481.1| aminomethyltransferase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 364
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 139/255 (54%), Gaps = 13/255 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD + G K+V F G++MPVQ+ SI H R + +FDVSHM + ++ GK
Sbjct: 6 KKTPLYDRFIESGAKIVEFGGWAMPVQFS--SIKEEHNAVREVMGIFDVSHMGEVLIEGK 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + D +L K + NE+GG+ DDLI K ++ LV NA+ D
Sbjct: 64 EASEFIQYVLSNDTDQLSDNKAQYTALCNEKGGVIDDLITYKLDDNKFLLVVNAANTDKD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
+ + + D+F D++++ +S ++ G +AVQGP + + D+D+S + F +
Sbjct: 124 YEWIKSHSDKF-----DVNVENVS-DQYGQLAVQGPKARDYVASLVDVDVSEMKPFEFKK 177
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
I G L+++GYTGEDG EI + I + LL + D+K AGLGARD+L
Sbjct: 178 DVEIFGKNVILSQSGYTGEDGFEIYCDSKDVVDIWDGLLENADLKPAGLGARDTLR---- 233
Query: 436 LNTPVPHGSLKLSND 450
L +P +LS D
Sbjct: 234 LEAGLPLHGQELSED 248
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 437 NTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLY- 495
NT + +K +D+F D++++ +S ++ G +AVQGP + + D+D+S +
Sbjct: 119 NTDKDYEWIKSHSDKF-----DVNVENVS-DQYGQLAVQGPKARDYVASLVDVDVSEMKP 172
Query: 496 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
F + I G L+++GYTGEDG EI + I + LL + D+K AGLGARD+L
Sbjct: 173 FEFKKDVEIFGKNVILSQSGYTGEDGFEIYCDSKDVVDIWDGLLENADLKPAGLGARDTL 232
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G +++ Q ++G + G G+P R GY++ + ++G +TSG SP+ K
Sbjct: 268 FIGKDVLKDQKENGAKLRSVGLEMIEKGIP-RTGYDVLDLKGNKIGQVTSGTQSPATGKG 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTK 110
IA+ I+ ++G E+ V+VR ++V K+ K
Sbjct: 327 IALAMIDRDEFEMGKEVIVQVRKRQVKAKIVK 358
>gi|408370807|ref|ZP_11168581.1| glycine cleavage system aminomethyltransferase T [Galbibacter sp.
ck-I2-15]
gi|407743799|gb|EKF55372.1| glycine cleavage system aminomethyltransferase T [Galbibacter sp.
ck-I2-15]
Length = 362
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 131/238 (55%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
T L ++H+ G KMVPFAG++MPVQY V TA H + R+ V VFDVSHM + +V+G+
Sbjct: 2 NNTALTNVHIELGAKMVPFAGYNMPVQYEGV--TAEHENVRNNVGVFDVSHMGEFLVSGQ 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ L+ +C DV +L GK + N+QGGI DDLI+ + ED LV NA+ + D
Sbjct: 60 NALALLQKVCSNDVSKLVVGKAQYNYLPNKQGGIVDDLIIYQIKEDQYLLVVNAANIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + F + ++I ++E L+A+QGP + +Q T +DLS++ F
Sbjct: 120 WEWITQHNEEFGADLRNI------SDEYSLLAIQGPKAIEAMQSLTTIDLSAIKFYQFEV 173
Query: 377 CTIAGIPCTLTRA-GYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
AGI + A GYTG G E+ E+ + E + D +K GL ARD+L
Sbjct: 174 GQFAGIENVIISATGYTGSGGFEVYCKNEEAGQLWEKVFEAGKDFGIKPIGLAARDTL 231
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G+ I+++Q + G++ K GF G+P R GY+I + N + +G +TSG +PSL
Sbjct: 265 FVGSDILKAQKERGLTNKLVGFQLEERGIP-RSGYQITDNNGKVIGNVTSGTMAPSLGIG 323
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
I MGY+ Y++ G + +++R +V V K+PF K+
Sbjct: 324 IGMGYVPVEYAEPGNTIGIQIRKNQVPATVVKLPFYKN 361
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA-GYTGEDGVEIS 525
+E L+A+QGP + +Q T +DLS++ F AGI + A GYTG G E+
Sbjct: 139 DEYSLLAIQGPKAIEAMQSLTTIDLSAIKFYQFEVGQFAGIENVIISATGYTGSGGFEVY 198
Query: 526 VPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
E+ + E + D +K GL ARD+L
Sbjct: 199 CKNEEAGQLWEKVFEAGKDFGIKPIGLAARDTL 231
>gi|296114894|ref|ZP_06833542.1| glycine cleavage system T protein [Gluconacetobacter hansenii ATCC
23769]
gi|295978600|gb|EFG85330.1| glycine cleavage system T protein [Gluconacetobacter hansenii ATCC
23769]
Length = 377
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 135/238 (56%), Gaps = 16/238 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV---T 254
RTPL+ LHL GG+MVPFAG+ MPVQY A + A HLHTR+ S+FDVSHM Q V +
Sbjct: 7 RTPLHALHLELGGRMVPFAGYDMPVQYEA-GVMAEHLHTRAAGSIFDVSHMGQVRVRPRS 65
Query: 255 GKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
G + L E + AD+ L PG+ +L E GGI DDL++ + LV NA+
Sbjct: 66 GVMADAALALERLVPADILALRPGRQRYALLMREDGGISDDLMIAN-MGTWFLLVVNAAC 124
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D L+ A + ++FLS +R LIA QGP + + +++ FM
Sbjct: 125 KDADFALIQA------GIADVCEVEFLS--DRALIAAQGPAAVAAMAELAPAT-AAMRFM 175
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
IAG+ C ++R+GYTGEDG EI +P Q + ALL+ D+ AGLGARDSL
Sbjct: 176 DVIETDIAGVACIVSRSGYTGEDGFEIGMPAGQAEDVARALLACTDIAAAGLGARDSL 233
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAIT 67
PG R GG+PGA I+ + G +R+R G G PIR G +F+ + +VG +T
Sbjct: 267 PGGVR--AGGYPGADIVAKHLSEGAARRRVGLRGEGRAPIRGGAPLFSDAEGTHQVGHVT 324
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SG PS+ ++MGY++ A + +G L+ VR + + V V +PFV +
Sbjct: 325 SGAFGPSVPGPVSMGYVDTASAAIGTPLFAGVRGRVLPVHVVALPFVAPTF 375
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 492 SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 551
+++ FM IAG+ C ++R+GYTGEDG EI +P Q + ALL+ D+ AGLGA
Sbjct: 170 AAMRFMDVIETDIAGVACIVSRSGYTGEDGFEIGMPAGQAEDVARALLACTDIAAAGLGA 229
Query: 552 RDSL 555
RDSL
Sbjct: 230 RDSL 233
>gi|114799925|ref|YP_761399.1| glycine cleavage system T protein [Hyphomonas neptunium ATCC 15444]
gi|114740099|gb|ABI78224.1| glycine cleavage system T protein [Hyphomonas neptunium ATCC 15444]
Length = 384
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 139/249 (55%), Gaps = 26/249 (10%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHM------LQ 250
+RTPL+D H+ GGK+V FAG+ MPVQ+ V A H+ TR++ +FDVSHM L+
Sbjct: 10 KRTPLFDSHVKMGGKLVAFAGYEMPVQFEGV--MAEHIWTRTQAGLFDVSHMGPCFLTLE 67
Query: 251 TVVTG---KHRE--EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTL----E 301
+ G H E +E++ +D+ L PG+ L++ NE GGI DDLI+T+ L +
Sbjct: 68 AGIGGGDAAHAEISALVETLVPSDITSLKPGQARLTVLLNEDGGILDDLIITRPLGEDAQ 127
Query: 302 DSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRH 361
+L++V N + ++ D + A GK + A++R L A+QGP + ++
Sbjct: 128 GTLYIVVNGAMKEQDWAIFEKAL-----AGKAV---LTRADDRILFALQGPKAVDVMADF 179
Query: 362 TDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKL 421
L FM P + G C ++R GYTGEDG E+ +P E ++E + +DE VK
Sbjct: 180 FP-GCEELTFMQHMPFEVNGQRCIVSRCGYTGEDGFEVLIPAEAGLPLIEEMYTDERVKP 238
Query: 422 AGLGARDSL 430
GLGARDSL
Sbjct: 239 IGLGARDSL 247
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE G FPGA I ++K G ++KR G P R G EI N + +G +TSG
Sbjct: 277 KRRREAGNFPGAERILRELKDGPAKKRVGIRPLERAPAREGAEI-QINGETIGVVTSGGF 335
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P+ +AMGY+ A++ G ++ + VR K +V +PFV NY
Sbjct: 336 GPTYDAPVAMGYVAAAHAAPGTKIDLIVRGKARPAEVAALPFVPQNY 382
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L A+QGP + ++ L FM P + G C ++R GYTGEDG E+ +
Sbjct: 160 DDRILFALQGPKAVDVMADFFP-GCEELTFMQHMPFEVNGQRCIVSRCGYTGEDGFEVLI 218
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E ++E + +DE VK GLGARDSL
Sbjct: 219 PAEAGLPLIEEMYTDERVKPIGLGARDSL 247
>gi|452994854|emb|CCQ93520.1| aminomethyltransferase (glycine cleavage system protein T)
[Clostridium ultunense Esp]
Length = 364
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H+ GGK+V +AG+ +PVQY + H R+ +FDVSHM + VV GK
Sbjct: 4 KKTPLYDEHVKLGGKIVDYAGWFLPVQYEG--LIPEHEAVRNAAGLFDVSHMGEIVVKGK 61
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + D+ ++ + + GG+ DD +V K E+ LV NA+ D
Sbjct: 62 DALAYLQYLLTNDIASIETDQIIYTFMCYPDGGVVDDFLVYKYSEEEYLLVVNAANTDKD 121
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
M+ + F + ++ +++ G +A+QGP S ILQ+ TD DLSS+ F +R
Sbjct: 122 FKWMIDNKKDFNIIIEN------KSDQIGEVAIQGPKSEKILQKLTDTDLSSIKPFHFNR 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
I+GI C ++R GYTGEDG E+ P E I +L ++ +K GLG RD+L
Sbjct: 176 KVNISGIECMVSRTGYTGEDGFEVYSPAEGIVKIWNDILEAGKEDGIKPTGLGCRDTL 233
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 470 GLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
G +A+QGP S ILQ+ TD DLSS+ F +R I+GI C ++R GYTGEDG E+ P
Sbjct: 144 GEVAIQGPKSEKILQKLTDTDLSSIKPFHFNRKVNISGIECMVSRTGYTGEDGFEVYSPA 203
Query: 529 EQCTHIVEALLS---DEDVKLAGLGARDSL 555
E I +L ++ +K GLG RD+L
Sbjct: 204 EGIVKIWNDILEAGKEDGIKPTGLGCRDTL 233
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q K G++RK GF G+P R GYE++ +++G +T+G SP+LKK+
Sbjct: 269 FIGKEALNKQWKEGLTRKVAGFELLERGIP-REGYEVYKEG-KKIGHVTTGYMSPTLKKS 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I I+ ++G E+ V +R++ V K+ F+K
Sbjct: 327 IGNALIDINEIELGNEVDVMIRNRPVKAKIISRKFLK 363
>gi|402574189|ref|YP_006623532.1| glycine cleavage system T protein [Desulfosporosinus meridiei DSM
13257]
gi|402255386|gb|AFQ45661.1| glycine cleavage system T protein [Desulfosporosinus meridiei DSM
13257]
Length = 370
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 134/237 (56%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ HL+H K++ F G+ MPVQY V + H R+K +FDVSHM + V G+
Sbjct: 5 KRTPLYEEHLAHKAKLIDFGGWEMPVQY--VGVIDEHHAVRTKAGLFDVSHMGEIEVRGQ 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + DV +L+ G+ S GGI DDL+V + +V NAS D
Sbjct: 63 DALEFIQMLITNDVSKLEDGRILYSPMCYPSGGIVDDLLVYRYNSQHFLIVVNASNTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
++ D F +++L +S ++ +A+QGPL+ T+LQR T+L+LS + + +
Sbjct: 123 YAWILKQADSF-----NVNLGNVS-DQYAQLALQGPLAETVLQRITELNLSQIKYYSFTH 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
I GI C ++R GYTGEDG EI V E + +L + E V+ GLGARD+L
Sbjct: 177 GNIDGISCLVSRTGYTGEDGFEIYVTPEHSRQLWRKILEVGALEGVQPIGLGARDTL 233
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
+A+QGPL+ T+LQR T+L+LS + + + I GI C ++R GYTGEDG EI V E
Sbjct: 147 LALQGPLAETVLQRITELNLSQIKYYSFTHGNIDGISCLVSRTGYTGEDGFEIYVTPEHS 206
Query: 532 THIVEALL---SDEDVKLAGLGARDSL 555
+ +L + E V+ GLGARD+L
Sbjct: 207 RQLWRKILEVGALEGVQPIGLGARDTL 233
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIA 80
F G +I +Q + GV RK G I + + Q +G +TSG SP+L KNIA
Sbjct: 268 FIGKEVILAQKEQGVPRKLVGLEMIERGIARSHYPLQKDGQEIGFVTSGSFSPTLNKNIA 327
Query: 81 MGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
+G ++ + G L V +R K V ++ F K + PK
Sbjct: 328 LGLVKADLAIQGQILDVMIRGKAVKARIVPSLFYKREDQSKPK 370
>gi|367006733|ref|XP_003688097.1| hypothetical protein TPHA_0M00880 [Tetrapisispora phaffii CBS 4417]
gi|357526404|emb|CCE65663.1| hypothetical protein TPHA_0M00880 [Tetrapisispora phaffii CBS 4417]
Length = 398
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 137/258 (53%), Gaps = 22/258 (8%)
Query: 184 TFVFSPGSSPSAE--QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVS 241
+F+ SS S++ ++T L+DLH+ G MVPFAG+SMP+ Y + SH TR+
Sbjct: 3 SFICKRFSSTSSQGLKKTALFDLHIELGATMVPFAGYSMPLLYKGQTHVESHKWTRTNAG 62
Query: 242 VFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLE 301
VFDVSHMLQ+ + G+ ++LE I D + +LS+F NE GGI DD ++TK
Sbjct: 63 VFDVSHMLQSSLQGEGSLKFLERITPTDFSLIKDHNASLSVFLNENGGIVDDTMITKVGA 122
Query: 302 DSLFLVSNASRRKVDMDLMVAAQDRFKSL------GKDIHLQFLSAEERGLIAVQGPLSS 355
D ++V+NA DR KS ++ +R L+A+QGP+SS
Sbjct: 123 DDFYIVNNA-----------GCADRVKSFIPEQLSKSGYECEWKMIPDRSLLALQGPMSS 171
Query: 356 TILQR--HTDLDLSSLYFMTSRPCTI-AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEA 412
ILQ L+SL F R + G+ + R+GYTGEDG EIS+ + +
Sbjct: 172 KILQNILAPSQTLNSLSFGQRRLFKLFNGVEIQVARSGYTGEDGFEISMLDKDAVDFAKL 231
Query: 413 LLSDEDVKLAGLGARDSL 430
+L +E K GL ARDSL
Sbjct: 232 ILDNELTKPIGLAARDSL 249
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 468 ERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTI-AGIPCTLTRAGYTGEDGVEI 524
+R L+A+QGP+SS ILQ L+SL F R + G+ + R+GYTGEDG EI
Sbjct: 159 DRSLLALQGPMSSKILQNILAPSQTLNSLSFGQRRLFKLFNGVEIQVARSGYTGEDGFEI 218
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
S+ + + +L +E K GL ARDSL
Sbjct: 219 SMLDKDAVDFAKLILDNELTKPIGLAARDSL 249
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 21 FPGASIIQSQIKSGVSRK-RTGF--TSTGVPIRPGYEIFNANDQR-VGAITSGCPSPSLK 76
F G I Q+K+ S++ R F T G R G +++ + Q +G +TSG SPSL
Sbjct: 292 FNGYEKIIDQLKNKSSKELRAAFKYTGRGPAARKGAKVYLPDKQTLIGTVTSGSASPSLN 351
Query: 77 K-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
NI Y++ Y K G EL V +R K + + K P V ++YY
Sbjct: 352 NINIGQVYVKNGYHKAGTELVVEIRGKFYPITIEKSPLVPTHYY 395
>gi|333896757|ref|YP_004470631.1| glycine cleavage system protein T [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112022|gb|AEF16959.1| Aminomethyltransferase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 369
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 129/237 (54%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD+H +G KM+ FAGF MPVQY SI H R +FDVSHM + +V GK
Sbjct: 8 KRTPLYDIHKKYGAKMIDFAGFEMPVQYE--SILKEHEAVRKNAGLFDVSHMGEIIVEGK 65
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + D+ ++ + S G DDL+V K + LV NAS D
Sbjct: 66 DSEKFINYMVTNDITKITENQAMYSPMCYHNGTTVDDLLVYKFSYEKYMLVVNASNIDKD 125
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ ++ F D+ ++ S E L A+QGP S IL++ T+ DL SL +
Sbjct: 126 YKWLWENKNGF-----DVEIKDESGEISEL-ALQGPKSQEILEKITNYDLDSLKYYHFDY 179
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+ GI C ++R+GYTGEDG EI + E ++ E +LS + +K AGLGARD+L
Sbjct: 180 MDLDGINCLVSRSGYTGEDGFEIFLKNEYVANMWEKILSVGENLGIKPAGLGARDTL 236
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
+A+QGP S IL++ T+ DL SL + + GI C ++R+GYTGEDG EI + E
Sbjct: 150 LALQGPKSQEILEKITNYDLDSLKYYHFDYMDLDGINCLVSRSGYTGEDGFEIFLKNEYV 209
Query: 532 THIVEALLS---DEDVKLAGLGARDSL 555
++ E +LS + +K AGLGARD+L
Sbjct: 210 ANMWEKILSVGENLGIKPAGLGARDTL 236
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + +Q + G+ RK GF I R GY+++ A +++G +T+G SP+LKKNI
Sbjct: 270 FIGKEALLNQKEEGLKRKIVGFEMADNAIPRHGYDVY-AEGEKIGYVTTGYLSPTLKKNI 328
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVT 109
M I+ ++ +G E+ + +R+K VT
Sbjct: 329 GMALIKSQFATIGNEINIIIRNKPYKAFVT 358
>gi|226323775|ref|ZP_03799293.1| hypothetical protein COPCOM_01550 [Coprococcus comes ATCC 27758]
gi|225207959|gb|EEG90313.1| aminomethyltransferase [Coprococcus comes ATCC 27758]
Length = 362
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 132/239 (55%), Gaps = 12/239 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLYD H+ GGK+VPFAG+ +PVQY + H+ R++ +FDVSHM + + G
Sbjct: 2 ELKTPLYDAHVKAGGKIVPFAGYLLPVQY-ETGVIKEHMAVRTQAGLFDVSHMGEILCEG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
K L+ I D + G+ S NE GG DDLIV K +D F+V NA+ +
Sbjct: 61 KDALVNLQHILTNDFTNMVDGQARYSPMCNENGGTVDDLIVYKRSDDHYFIVVNAANKDK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-HTDLDLSSLYFMTS 374
D M+A Q + D+ Q+ G IA+QGP + IL++ T+ ++ Y+
Sbjct: 121 DYQWMLAHQSGEVTF-TDVSDQY------GQIALQGPKAMEILRKLTTEENIPKKYYHAV 173
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+AG+PC +++ GYTGEDGVEI + + + E LL +E + GLGARD+L
Sbjct: 174 FGAEVAGMPCIVSKTGYTGEDGVEIYLASDLAEKMWETLLEAGKEEGLIPCGLGARDTL 232
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQR-HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
++ G IA+QGP + IL++ T+ ++ Y+ +AG+PC +++ GYTGEDGVEI
Sbjct: 140 DQYGQIALQGPKAMEILRKLTTEENIPKKYYHAVFGAEVAGMPCIVSKTGYTGEDGVEIY 199
Query: 526 VPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
+ + + E LL +E + GLGARD+L
Sbjct: 200 LASDLAEKMWETLLEAGKEEGLIPCGLGARDTL 232
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 38 KRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWV 97
+R G TG I ++ A DQ++G TSG P L IAM ++ +G ++
Sbjct: 282 ERIGLKVTGRGIIREHQDLYAGDQKIGHTTSGTHCPYLGYPIAMALVDAGSVAIGDKVEA 341
Query: 98 RVRDKRVDVKVTKMPFVK 115
VR +RV+ +V ++PF K
Sbjct: 342 DVRGRRVEAEVVQLPFYK 359
>gi|46198456|ref|YP_004123.1| glycine cleavage system aminomethyltransferase T [Thermus
thermophilus HB27]
gi|59797794|sp|Q72LB1.1|GCST_THET2 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|46196078|gb|AAS80496.1| aminomethyltransferase [Thermus thermophilus HB27]
Length = 349
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 129/235 (54%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ HL G +MV FAG+ +P+QY SI HL R V VFDVSHM + +V G+
Sbjct: 2 KKTPLYEAHLRLGARMVDFAGYLLPLQY--TSIVEEHLAVRRAVGVFDVSHMGEFLVRGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ D +L G+ S+ NE+GG+ DD+ + + E+ +V NA+ D
Sbjct: 60 EALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ ++L K ++ A ER L+A+QGP + +LQ D+DLS+
Sbjct: 120 L-------AHLQALAKGFRVELEDASERTALLALQGPKAQALLQGLVDVDLSTKRKNDVF 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
P +AG P L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 173 PARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 452 FKSLGKDIHLQFLSPEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
++L K ++ ER L+A+QGP + +LQ D+DLS+ P +AG P
Sbjct: 123 LQALAKGFRVELEDASERTALLALQGPKAQALLQGLVDVDLSTKRKNDVFPARVAGRPAR 182
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 183 LARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
>gi|225570253|ref|ZP_03779278.1| hypothetical protein CLOHYLEM_06349 [Clostridium hylemonae DSM
15053]
gi|225161048|gb|EEG73667.1| hypothetical protein CLOHYLEM_06349 [Clostridium hylemonae DSM
15053]
Length = 362
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 135/246 (54%), Gaps = 14/246 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLY+ H+ GGKMVPFAG+++PVQYG + H+ R + +FDVSHM + + G
Sbjct: 2 ELKTPLYEAHVRAGGKMVPFAGYTLPVQYG-TGVIKEHMAVRERAGLFDVSHMGEILCEG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ + L+ + + + G+ S NE+GG DDLIV K +D F+V NA+ +
Sbjct: 61 RDALDNLQMLLTNNFANMSDGQARYSPMCNEKGGTVDDLIVYKEADDRYFIVVNAANKDK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLD-LSSLYFMT 373
D + M+A Q + F ER +A+QGP + IL++ T + + Y+
Sbjct: 121 DYEWMLAHQSG--------EVTFTDVSERYAQLALQGPQAMKILRKITKEEHIPQKYYHA 172
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
GIPC +++ GYTGEDGVE+ + E+ + + LL +E + GLGARD+L
Sbjct: 173 VFDGEAGGIPCIISKTGYTGEDGVELYLDSEKAGEMWDLLLENGKEEGLIPCGLGARDTL 232
Query: 431 SGDITL 436
+ ++
Sbjct: 233 RMEASM 238
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLD-LSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
E +A+QGP + IL++ T + + Y+ GIPC +++ GYTGEDGVE+
Sbjct: 140 ERYAQLALQGPQAMKILRKITKEEHIPQKYYHAVFDGEAGGIPCIISKTGYTGEDGVELY 199
Query: 526 VPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
+ E+ + + LL +E + GLGARD+L
Sbjct: 200 LDSEKAGEMWDLLLENGKEEGLIPCGLGARDTL 232
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 10 FPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSG 69
F GK+ E G P RKR G TG I ++ A + +G TSG
Sbjct: 267 FIGKKAMEEQGEP-------------KRKRVGLKVTGRGIIREHQDVYAEGKLIGHTTSG 313
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
P L +AM + Y++ G + V VR + V+ K+ +PF K
Sbjct: 314 THCPYLGYPVAMALVSAKYAEPGRTVSVEVRGRMVEAKIVPLPFYK 359
>gi|119504941|ref|ZP_01627018.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2080]
gi|119459227|gb|EAW40325.1| glycine cleavage system T protein [marine gamma proteobacterium
HTCC2080]
Length = 366
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 132/234 (56%), Gaps = 15/234 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++ PL+ +H + GGK PFAG++MPVQY A + A HLHTR+K +FDVSHM Q +
Sbjct: 5 KQLPLHAVHQTAGGKFSPFAGYNMPVQYTA-GVMAEHLHTRTKAGLFDVSHMGQLKLPLS 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ LE + D+ L G+ SL T E GG+ DDL++ + ED L LV NASRR D
Sbjct: 64 AVDA-LEILLPTDIRALPIGRQCYSLLTTESGGVLDDLMIARRQEDYL-LVVNASRRDAD 121
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
++ LG+ I ++ ++R L+A+QGP + +L D++ + FM
Sbjct: 122 LE----------HLGRHIK-DVVTIDDRALLALQGPCAEAVLMPLIP-DVTHMRFMDVAV 169
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
++R+GYTGEDG EIS+ ALL +EDV L GLGARDSL
Sbjct: 170 VYWQAHEIWISRSGYTGEDGFEISILVSAAEDFTHALLENEDVALCGLGARDSL 223
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
+ LG+ I ++ ++R L+A+QGP + +L D++ + FM +
Sbjct: 122 LEHLGRHIK-DVVTIDDRALLALQGPCAEAVLMPLIP-DVTHMRFMDVAVVYWQAHEIWI 179
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EIS+ ALL +EDV L GLGARDSL
Sbjct: 180 SRSGYTGEDGFEISILVSAAEDFTHALLENEDVALCGLGARDSL 223
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 13 KRRRETGGFPG----ASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGA 65
+ RR TG FPG A I ++ G +R+R G G P+R G ++++ + + +G
Sbjct: 253 RSRRATGKFPGEFLGADRILRELDHGAARRRIGLKPQGRAPMRDGVLLYDSPEGSEPIGV 312
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
ITSG SPSL+ IAM I+ ++ VR +R++ + K F + NY
Sbjct: 313 ITSGGFSPSLRAPIAMALIKSEVDSRAT-VFGEVRGRRLEAQQVKPLFHQPNY 364
>gi|167758909|ref|ZP_02431036.1| hypothetical protein CLOSCI_01255 [Clostridium scindens ATCC 35704]
gi|167663316|gb|EDS07446.1| aminomethyltransferase [Clostridium scindens ATCC 35704]
Length = 362
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 181/367 (49%), Gaps = 39/367 (10%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLYD H+ GGKMVPF G+ +PVQY + H+ R + +FDVSHM + + G
Sbjct: 2 ELKTPLYDAHVKAGGKMVPFGGYILPVQY-PTGVIKEHMAVRRQAGLFDVSHMGEILCEG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ L+ I + + G+ S NE GG DDLIV K E+ F+V NA+ +
Sbjct: 61 EDALANLQMILTNNFDNMKDGQARYSPMCNENGGTVDDLIVYKKAENQYFIVVNAANKDK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-HTDLDLSSLYFMTS 374
D M+A Q S +D+ Q+ +A+QGP + IL++ + D+ Y+
Sbjct: 121 DYQWMLAHQFGKASF-RDVSDQYAQ------LALQGPKAMEILRKIAKEEDIPKKYYHAV 173
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
AGIPC +++ GYTGEDGVE+ + + + LL +E + GLGARD+L
Sbjct: 174 FDAKAAGIPCIISKTGYTGEDGVELYLDAGLAEKLWDILLEAGKEEGLIPCGLGARDTLR 233
Query: 432 GDITLN----------TPVPHG---SLKLSNDRFKSLGKDIHLQFLSPEERGL-IAVQGP 477
+ + TP+ G ++K++ + F +GKD + P+ + + + V G
Sbjct: 234 MEAAMPLYGHEMDDEVTPLETGLGFAVKMAKEDF--VGKDALIAQGEPKRKRIGLKVTG- 290
Query: 478 LSSTILQRHTD--LDLSSLYFMTS-RPCTIAGIPC--TLTRAGYTGEDGVEISVPGEQCT 532
I++ H D +D + TS C G P L A YT E+G ++ V E
Sbjct: 291 --RGIIREHQDVFVDGKVIGHTTSGTHCPFLGYPIGMALVDAAYT-EEGTKVEV--EVRG 345
Query: 533 HIVEALL 539
IVEA +
Sbjct: 346 RIVEAFV 352
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 36 SRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVEL 95
RKR G TG I ++ + + +G TSG P L I M ++ AY++ G ++
Sbjct: 280 KRKRIGLKVTGRGIIREHQDVFVDGKVIGHTTSGTHCPFLGYPIGMALVDAAYTEEGTKV 339
Query: 96 WVRVRDKRVDVKVTKMPFVK 115
V VR + V+ V +PF K
Sbjct: 340 EVEVRGRIVEAFVVALPFYK 359
>gi|405758395|ref|YP_006687671.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2479]
gi|404236277|emb|CBY57679.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2479]
Length = 362
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K LE LV NA+ D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKLETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIRGDVSVTNVSSE-YGQLALQGPNAEKILSKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++++G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEQIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGINIGLALIDTAYTELGQEVEVGIRNKKVKAKIVPTPFYK 359
>gi|410945003|ref|ZP_11376744.1| glycine cleavage system protein T [Gluconobacter frateurii NBRC
101659]
Length = 377
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 134/240 (55%), Gaps = 18/240 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV--- 253
QRTPL+ L+L G KMVPFAG+ MP+QY A + + HLHTRSK +FDVSHM Q +
Sbjct: 6 QRTPLHALNLELGAKMVPFAGYEMPLQYPA-GLMSEHLHTRSKAGLFDVSHMGQIRIAAR 64
Query: 254 TGKHREEWL--ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G R+ L ES+ AD L G+ TN+ GI DDL+V + D LF+V NAS
Sbjct: 65 SGDVRDAALALESLIPADYAGLAKGRQRYGFLTNDAAGILDDLMVAN-MGDDLFVVVNAS 123
Query: 312 RRKVDMDLMVAA-QDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
++ D L+ AA DR + QF +R L+A+QGP + + + +
Sbjct: 124 CKEQDAALIEAALSDRCV-----VTRQF----DRALMALQGPQAQDAIAPLCP-PAAEMR 173
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM +AG+P TL+R+GYTGEDG EI + A+L+ V GLGARDSL
Sbjct: 174 FMDVIETELAGVPVTLSRSGYTGEDGYEIGCAAADAETVARAVLAQPQVLPIGLGARDSL 233
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 13 KRRRE----TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF-NANDQR-VGA 65
K RRE GG+PGA I+ Q + GVSRKR G + G P+R G ++F +A Q+ +G
Sbjct: 263 KARREGGSREGGYPGAEIVLRQAREGVSRKRVGLMTEGRAPVRAGAKLFADAEGQKEIGV 322
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+TSG P+++ +AMGY+ Y+ L+ +R K V V + MPFV +
Sbjct: 323 VTSGAFGPTVQAPVAMGYVATDYAGNDTALFAELRGKFVPVHIRAMPFVAPGF 375
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + + + + FM +AG+P TL+R+GYTGEDG EI
Sbjct: 147 DRALMALQGPQAQDAIAPLCP-PAAEMRFMDVIETELAGVPVTLSRSGYTGEDGYEIGCA 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ A+L+ V GLGARDSL
Sbjct: 206 AADAETVARAVLAQPQVLPIGLGARDSL 233
>gi|313680530|ref|YP_004058269.1| aminomethyltransferase [Oceanithermus profundus DSM 14977]
gi|313153245|gb|ADR37096.1| aminomethyltransferase [Oceanithermus profundus DSM 14977]
Length = 357
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 128/234 (54%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD H GG++V FAG+++PVQY SIT HL R V +FDVSHM + V G
Sbjct: 6 KRTPLYDEHQKLGGRIVDFAGWALPVQY--TSITKEHLAVREAVGLFDVSHMGEFFVRGP 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L + D +L G+ S+ N++GG+ DD+ V +T E+ +V NA+ D
Sbjct: 64 QALAFLRWATLNDPAKLKVGRAQYSMLPNDRGGVVDDVYVYRTGEEEYLVVVNAANVAKD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A F D+ L+ S + L+A+QGP + LQ TD DLS + +
Sbjct: 124 WAHLNALVGSF-----DVELEDAS-DAWALMALQGPRAEGALQTLTDTDLSRVRKNATLA 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+AG+P + R GYTGEDG EI E + ALL + AGLGARD+L
Sbjct: 178 LTVAGVPARIARTGYTGEDGFEIFTAPEDAPAVWRALL-EAGATPAGLGARDTL 230
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
D+ L+ S + L+A+QGP + LQ TD DLS + + T+AG+P + R GYT
Sbjct: 135 DVELEDAS-DAWALMALQGPRAEGALQTLTDTDLSRVRKNATLALTVAGVPARIARTGYT 193
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EI E + ALL + AGLGARD+L
Sbjct: 194 GEDGFEIFTAPEDAPAVWRALL-EAGATPAGLGARDTL 230
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 46 GVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVD 105
G+P R GY + A G +TSG SP LKK IA+G++ ++ G EL V VR + +
Sbjct: 286 GIP-REGYPVL-AGGAPAGRVTSGTQSPVLKKGIALGWVRADLAEEGTELAVEVRGRALP 343
Query: 106 VKVTKMPFV 114
+V + PFV
Sbjct: 344 ARVVRPPFV 352
>gi|154246144|ref|YP_001417102.1| glycine cleavage system T protein [Xanthobacter autotrophicus Py2]
gi|154160229|gb|ABS67445.1| glycine cleavage system T protein [Xanthobacter autotrophicus Py2]
Length = 381
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 136/239 (56%), Gaps = 17/239 (7%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ H + G +MVPFAG+ MPVQY I A H TR++ +FDVSHM Q ++ G
Sbjct: 10 TPLFSAHRALGARMVPFAGYQMPVQY-PEGILAEHGWTRTRAGLFDVSHMGQALLKGSDH 68
Query: 259 E---EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTL----EDSLFLVSNAS 311
LE++ AD L PG+ S E GGI DD +VT+ L + +L LV NA+
Sbjct: 69 ATTARALEALAPADFLNLAPGRQRYSQLLAEDGGIIDDFMVTRPLAPEADGTLILVVNAA 128
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYF 371
+ D + A L + + L + ER L+A+QGP ++ ++ RH + ++L F
Sbjct: 129 CKAGDFAHIAA------HLPEGVAL--VERPERALLALQGPEAAAVMARHCP-EAATLDF 179
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M + P GIP ++R+GYTGEDG EISV E + ALL++ +VK GLGARDSL
Sbjct: 180 MAAIPTEFDGIPVEVSRSGYTGEDGFEISVENESAPLLWAALLAEPEVKAIGLGARDSL 238
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRR GGFPG + IQ ++ G +R R G G P R G EI + + VG +TSG
Sbjct: 268 KRRRTEGGFPGDARIQRELAQGPARVRVGLRLEGRAPAREGAEIAS-DGAVVGRVTSGGF 326
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
+P+L IAMGY+ PA S G L V VR K + V +PFV + Y PK
Sbjct: 327 APTLGAPIAMGYVPPALSAPGTRLDVLVRGKALAATVASLPFVPTRYARKPK 378
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 438 TPVPHGSLKLSNDRFKSLGKDIHLQFLSPE--------ERGLIAVQGPLSSTILQRHTDL 489
P G+L L + G H+ PE ER L+A+QGP ++ ++ RH
Sbjct: 114 APEADGTLILVVNAACKAGDFAHIAAHLPEGVALVERPERALLALQGPEAAAVMARHCP- 172
Query: 490 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 549
+ ++L FM + P GIP ++R+GYTGEDG EISV E + ALL++ +VK GL
Sbjct: 173 EAATLDFMAAIPTEFDGIPVEVSRSGYTGEDGFEISVENESAPLLWAALLAEPEVKAIGL 232
Query: 550 GARDSL 555
GARDSL
Sbjct: 233 GARDSL 238
>gi|320449768|ref|YP_004201864.1| glycine cleavage system T protein [Thermus scotoductus SA-01]
gi|320149937|gb|ADW21315.1| glycine cleavage system T protein [Thermus scotoductus SA-01]
Length = 349
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 129/234 (55%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY HL HGG+MV FAG+++P+QY SI HL R +FDVSHM + ++ G+
Sbjct: 2 KKTPLYQAHLRHGGRMVEFAGYALPLQY--TSIVEEHLAVRRGAGLFDVSHMGEFLIRGR 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ D +L G+ S+ N +GG+ DD+ + + E+ +V NA+ D
Sbjct: 60 EALAFLQWATANDAAKLKVGRAQYSMLPNARGGVVDDIYLYRLAEEEYLMVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
A + S G + L LS EE L+A+QGP ++++LQ TD DLS
Sbjct: 120 F-----AHLKELSRGFAVELTDLS-EETALLALQGPKAASLLQGLTDADLSQRKKNDVFS 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG P L R GYTGEDG E+ + + + EALL + AGLGARD+L
Sbjct: 174 ARVAGRPARLARTGYTGEDGFELFLAPKDAEAVFEALL-EAGATPAGLGARDTL 226
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
S G + L LS EE L+A+QGP ++++LQ TD DLS +AG P L R
Sbjct: 127 SRGFAVELTDLS-EETALLALQGPKAASLLQGLTDADLSQRKKNDVFSARVAGRPARLAR 185
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG E+ + + + EALL + AGLGARD+L
Sbjct: 186 TGYTGEDGFELFLAPKDAEAVFEALL-EAGATPAGLGARDTL 226
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 44 STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKR 103
G+P R GY +++ D+ VG +TSG SP L+K IA+ Y+E + +V VR ++
Sbjct: 281 EAGIP-REGYRVYS-GDRPVGRVTSGGYSPLLEKGIALAYVEKGAQE---PFFVEVRGRK 335
Query: 104 VDVKVTKMPFV 114
++ +PFV
Sbjct: 336 AGASLSPLPFV 346
>gi|336244345|ref|XP_003343275.1| hypothetical protein SMAC_10231 [Sordaria macrospora k-hell]
Length = 295
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 141/254 (55%), Gaps = 24/254 (9%)
Query: 190 GSSPSAE---QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
GS P E Q PL H + GG+MVPFAG++MPVQY I A HL TR +FDVS
Sbjct: 18 GSDPVEELPPQSLPLDAWHRAKGGRMVPFAGYTMPVQY--EGIMAEHLWTRDSAGLFDVS 75
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK-------- 298
HM Q ++ G LE++ D+ L P K SL ++QGGI DDL+VT+
Sbjct: 76 HMGQLLIHGPDATAALEALLPGDLKILKPAKMRYSLLLDDQGGILDDLMVTRLGSEQPFG 135
Query: 299 --TLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSST 356
+D+ ++V N + + D+ + ++L +I L L ++R L+A+QGP +
Sbjct: 136 EVEGDDAFYMVVNGATKYDDIGHLR------ENLADEITLNHL--DDRALLALQGPKAVD 187
Query: 357 ILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD 416
L R +++L FMT+ G ++R+GYTGEDG EIS+P + T +A+ ++
Sbjct: 188 ALDRILP-GVAALTFMTAGAFEWQGHALWVSRSGYTGEDGFEISLPEDAATAFADAICAE 246
Query: 417 EDVKLAGLGARDSL 430
+VK GLGARDSL
Sbjct: 247 PEVKPIGLGARDSL 260
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
++L +I L L ++R L+A+QGP + L R +++L FMT+ G ++
Sbjct: 161 ENLADEITLNHL--DDRALLALQGPKAVDALDRILP-GVAALTFMTAGAFEWQGHALWVS 217
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R+GYTGEDG EIS+P + T +A+ ++ +VK GLGARDSL
Sbjct: 218 RSGYTGEDGFEISLPEDAATAFADAICAEPEVKPIGLGARDSL 260
>gi|146412033|ref|XP_001481988.1| hypothetical protein PGUG_05751 [Meyerozyma guilliermondii ATCC
6260]
Length = 393
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 136/252 (53%), Gaps = 20/252 (7%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
S S RTPLYD H+ GGKMV +AGF MPV Y + SH RSKV +FDVSHML
Sbjct: 10 ASGASKLLRTPLYDCHVELGGKMVDYAGFEMPVLYKGQTHVESHNWVRSKVGLFDVSHML 69
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
Q G E L+ I D+ L +L++ N+ GG+ DD I+TK E+ ++V+N
Sbjct: 70 QHKFKGAQPRELLQKITPIDLAYLPINSSSLTVLLNKNGGVIDDCIITKHGENDYYMVTN 129
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDI-HLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
A R D+ + F D+ H F E L+A+QGP ++ +LQ+ T+ DLS
Sbjct: 130 AGCRTKDVKFIKEEAANF-----DVDHSTF----EGTLLAIQGPEAAGLLQKFTNEDLSK 180
Query: 369 LYFMTSR--PCTIAGIPCTLTRAGYTGEDGVEISVP------GEQCTHIVEALLSD--ED 418
+ F ++ ++ G L R+GYTGEDG E+ +P ++ + +L+ D +
Sbjct: 181 ITFGNTKYLKLSLIGADVHLARSGYTGEDGFELLIPSSTPQESQESQNFFRSLIEDYPDL 240
Query: 419 VKLAGLGARDSL 430
V+ GL ARDSL
Sbjct: 241 VRPIGLAARDSL 252
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 9 IFPGKRRRETGG-FPGASIIQSQIKSGV--SRKRTGFTSTGVPIRPGYEIFNANDQRVGA 65
+ P RR E F GAS I SQIK S+KR G S G R G ++F+ + + +G
Sbjct: 279 LIPKLRRDEKNATFNGASKILSQIKDKTLCSKKRIGLLSKGPSPRDGNKLFSEDGKEIGH 338
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
ITSG PSP+L N+A Y + K G +++ +R K+ + V KMPFV+S +Y
Sbjct: 339 ITSGSPSPTLGGNVAQAYADKLL-KSGTKVFFELRGKKREAIVAKMPFVESKFY 391
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR--PCTIAGIPCTLTRAGYTGEDGVEIS 525
E L+A+QGP ++ +LQ+ T+ DLS + F ++ ++ G L R+GYTGEDG E+
Sbjct: 155 EGTLLAIQGPEAAGLLQKFTNEDLSKITFGNTKYLKLSLIGADVHLARSGYTGEDGFELL 214
Query: 526 VP------GEQCTHIVEALLSD--EDVKLAGLGARDSL 555
+P ++ + +L+ D + V+ GL ARDSL
Sbjct: 215 IPSSTPQESQESQNFFRSLIEDYPDLVRPIGLAARDSL 252
>gi|429852342|gb|ELA27483.1| glycine cleavage system t protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 429
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 138/258 (53%), Gaps = 23/258 (8%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S + +TPLYD HL+HGGKMV F G MPVQY +S+ SH TR+ S+FDVSHM+Q
Sbjct: 24 SKQDKTPLYDFHLAHGGKMVIFGGHHMPVQYTGLSLAESHHFTRNHASLFDVSHMVQHRF 83
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLF-TNEQGGIQDDLIVTKTLEDSLFLVSNA-S 311
TG +LE++ + V +++ LS F + GGI DD ++T+ E+ +VSNA +
Sbjct: 84 TGPKAASFLETVTPSSVLDMEINSSKLSTFLWPKTGGIVDDTMITRLGENEYAVVSNAGT 143
Query: 312 RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD----LDLS 367
R K+ L D K D + L E GL+A+QGP ++ +LQ D L+L
Sbjct: 144 REKIFKYLTEQTADLQKPESNDFWWEVL--EGYGLVALQGPQAAEVLQEVIDPADGLNLE 201
Query: 368 SLYFMTSRPCTI----------AGIPCTLTRAGYTGEDGVEISVPGE--QCTHIVEALLS 415
LYF + + ++R GYTGEDG EIS + + E LL
Sbjct: 202 QLYFGNTGFAKLRYKVNGEWKTTSEKAMISRGGYTGEDGFEISFKSTNGEAQPLAETLLE 261
Query: 416 ---DEDVKLAGLGARDSL 430
E ++LAGLGARDSL
Sbjct: 262 VAGPERLQLAGLGARDSL 279
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 13 KRRRETGGFPGASIIQSQI------KSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
K RR GGF GA +I Q+ SG+ R+R GF G P R G EIF + ++VG I
Sbjct: 309 KERRTKGGFHGAEVITKQLVPKSKGGSGIERRRVGFLVAGAPAREGAEIFTKDGEKVGVI 368
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
TSG PSP+L KNIAMGY++ K G EL V VR K+ V KMP V S Y+ P
Sbjct: 369 TSGSPSPTLGKNIAMGYVKEGQHKSGTELDVVVRGKKRAATVAKMPLVPSKYFKGP 424
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 19/108 (17%)
Query: 467 EERGLIAVQGPLSSTILQRHTD----LDLSSLYFMTSRPCTI----------AGIPCTLT 512
E GL+A+QGP ++ +LQ D L+L LYF + + ++
Sbjct: 172 EGYGLVALQGPQAAEVLQEVIDPADGLNLEQLYFGNTGFAKLRYKVNGEWKTTSEKAMIS 231
Query: 513 RAGYTGEDGVEISVPGE--QCTHIVEALLS---DEDVKLAGLGARDSL 555
R GYTGEDG EIS + + E LL E ++LAGLGARDSL
Sbjct: 232 RGGYTGEDGFEISFKSTNGEAQPLAETLLEVAGPERLQLAGLGARDSL 279
>gi|384081703|ref|ZP_09992878.1| glycine cleavage system aminomethyltransferase T [gamma
proteobacterium HIMB30]
Length = 369
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 124/230 (53%), Gaps = 10/230 (4%)
Query: 201 LYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREE 260
L H G K PFAG+ MP+QY + + HLHTR V +FDVSHM Q +V G E
Sbjct: 9 LESFHTEQGAKFAPFAGYKMPIQY-PLGVKGEHLHTRESVGLFDVSHMGQLLVEGPGITE 67
Query: 261 WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLM 320
LE++ A + E+ PG+ S T GGI DDL++T+ + + LV N + + VDM+ M
Sbjct: 68 ALETLVPAALQEMAPGQIRYSQLTLNNGGILDDLMLTRWNDTTWGLVVNGACKHVDMEHM 127
Query: 321 VAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA 380
A L I + +L + LIAVQGP + L R + L FM + T +
Sbjct: 128 RAM------LPDSIQMNYL--DTHALIAVQGPRARDALTRMMP-EAGELVFMRAVQTTWS 178
Query: 381 GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G P TL+ GYTGEDG EIS+ + EAL + E+ GLGAR+SL
Sbjct: 179 GHPITLSCCGYTGEDGYEISIANTHAQELAEALTTLEETTWVGLGARNSL 228
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG--VPIRPGYEIFNAND 60
I + LL KRRR GGF GA I QI G RKR G P+R + N+
Sbjct: 248 IEADLLWSIQKRRRTNGGFLGADTILQQINDGPPRKRVGIAPADGRTPLRDHTLLKNSAG 307
Query: 61 QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
VG ITSG P+ + IAMGY+ S G EL+ VR K + V FV+ Y
Sbjct: 308 DEVGEITSGGFGPTFEGPIAMGYVTHNMSTPGTELFAEVRGKSLPCTVCDPIFVQQRY 365
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 455 LGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA 514
L I + +L + LIAVQGP + L R + L FM + T +G P TL+
Sbjct: 131 LPDSIQMNYL--DTHALIAVQGPRARDALTRMMP-EAGELVFMRAVQTTWSGHPITLSCC 187
Query: 515 GYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EIS+ + EAL + E+ GLGAR+SL
Sbjct: 188 GYTGEDGYEISIANTHAQELAEALTTLEETTWVGLGARNSL 228
>gi|403745004|ref|ZP_10954032.1| glycine cleavage system T protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121659|gb|EJY55936.1| glycine cleavage system T protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 457
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 134/254 (52%), Gaps = 13/254 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT LYD HL G K++ F GF MPVQY I H RS V +FDVSHM + V G+
Sbjct: 96 KRTSLYDAHLQLGAKVIDFHGFEMPVQYRG--IREEHASVRSAVGIFDVSHMGEIEVKGE 153
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ I DV L G+ +L +E GG+ DDL+V + EDS +LV NASR D
Sbjct: 154 DARRFLQYIVTNDVERLRVGRAMYTLMVDETGGVIDDLLVYQMAEDSYWLVVNASRVAED 213
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A D ++ KD ++E L+A+QGP ++T+LQ D+D++ L +
Sbjct: 214 DAWIRAHADGYEVTVKD------RSDEVALVAIQGPEAATLLQSVADVDVTELRPFSFVR 267
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITL 436
+ G P ++R GYTGEDG E+ + +L+ D GLGARD+L L
Sbjct: 268 TELYGNPSIISRTGYTGEDGFEVYASPTAVQRLFASLI-DHGALPCGLGARDTLR----L 322
Query: 437 NTPVPHGSLKLSND 450
+P +LS D
Sbjct: 323 EACLPLYGNELSRD 336
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 17 ETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSL 75
+ G F G + Q ++GVSRK G I R GY +++ ++ VG +TSG SP+L
Sbjct: 351 DKGPFIGRDALVRQHEAGVSRKLVGLQMDDRAIARAGYPVWH-GEKMVGQVTSGTLSPTL 409
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
IA+ ++ Y++VG +L V +R +R V + PF K
Sbjct: 410 GVPIALALVDANYAEVGQQLAVEIRSRRHGAHVVQTPFYK 449
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E L+A+QGP ++T+LQ D+D++ L + + G P ++R GYTGEDG E+
Sbjct: 233 DEVALVAIQGPEAATLLQSVADVDVTELRPFSFVRTELYGNPSIISRTGYTGEDGFEVYA 292
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ +L+ D GLGARD+L
Sbjct: 293 SPTAVQRLFASLI-DHGALPCGLGARDTL 320
>gi|294676692|ref|YP_003577307.1| glycine cleavage T protein [Rhodobacter capsulatus SB 1003]
gi|294475512|gb|ADE84900.1| glycine cleavage T protein-1 [Rhodobacter capsulatus SB 1003]
Length = 369
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 131/234 (55%), Gaps = 15/234 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L +LH+ G KMVPFAG+ MPVQY + + HLHTR+ +FDVSHM Q ++ +
Sbjct: 8 KRTALCNLHVELGAKMVPFAGWDMPVQY-PMGVLKEHLHTRAAAGLFDVSHMGQVILPIE 66
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LE++ D+ L + ++FTNE GGI DDL+V D LFLV NA+ + D
Sbjct: 67 AVAA-LEALVPVDIAGLGLNRQRYAMFTNEAGGILDDLMVANR-GDHLFLVVNAACAEAD 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A R G + E RGL+A+QGPL+ T L R ++++ FM S
Sbjct: 125 I-----AHLRAHVPGVTV------VEGRGLLALQGPLAETALARLVP-GVAAMRFMDSAR 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP ALL+ +V GLGARDSL
Sbjct: 173 FVWEGADLWVSRSGYTGEDGFEISVPDAVIEGFARALLAMAEVAPIGLGARDSL 226
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E RGL+A+QGPL+ T L R ++++ FM S G ++R+GYTGEDG EISV
Sbjct: 139 EGRGLLALQGPLAETALARLVP-GVAAMRFMDSARFVWEGADLWVSRSGYTGEDGFEISV 197
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ALL+ +V GLGARDSL
Sbjct: 198 PDAVIEGFARALLAMAEVAPIGLGARDSL 226
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAITSGCPSPSL 75
GGFPGA I ++ G +RKR G G P+R G EI+ +G +TSG PS+
Sbjct: 266 GGFPGADRILRELTEGAARKRIGLRPEGRAPMREGVEIYAEATGGSPIGRVTSGGFGPSI 325
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AM Y+ P G ++ VR KR+ +VT +PF ++Y
Sbjct: 326 DGPMAMAYL-PVDLAPGATVYGEVRGKRLPARVTDLPFHPTSY 367
>gi|336423469|ref|ZP_08603598.1| glycine cleavage system T protein [Lachnospiraceae bacterium
5_1_57FAA]
gi|336004502|gb|EGN34565.1| glycine cleavage system T protein [Lachnospiraceae bacterium
5_1_57FAA]
Length = 362
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 181/367 (49%), Gaps = 39/367 (10%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLYD H+ GGKMVPF G+ +PVQY + H+ R + +FDVSHM + + G
Sbjct: 2 ELKTPLYDAHVKAGGKMVPFGGYILPVQY-PTGVIKEHMAVRRQAGLFDVSHMGEILCEG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ L+ I + + G+ S NE GG DDLIV K E+ F+V NA+ +
Sbjct: 61 EDALANLQMILPNNFDNMKDGQARYSPMCNENGGTVDDLIVYKKAENQYFIVVNAANKDK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-HTDLDLSSLYFMTS 374
D M+A Q S +D+ Q+ +A+QGP + IL++ + D+ Y+
Sbjct: 121 DYQWMLAHQFGKASF-RDVSDQYAQ------LALQGPKAMEILRKIAKEEDIPKKYYHAV 173
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
AGIPC +++ GYTGEDGVE+ + + + LL +E + GLGARD+L
Sbjct: 174 FDAKAAGIPCIISKTGYTGEDGVELYLDAGLAEKLWDILLEAGKEEGLIPCGLGARDTLR 233
Query: 432 GDITLN----------TPVPHG---SLKLSNDRFKSLGKDIHLQFLSPEERGL-IAVQGP 477
+ + TP+ G ++K++ + F +GKD + P+ + + + V G
Sbjct: 234 MEAAMPLYGHEMDDEVTPLETGLGFAVKMAKEDF--VGKDALIARGEPKRKRIGLKVTG- 290
Query: 478 LSSTILQRHTD--LDLSSLYFMTS-RPCTIAGIPC--TLTRAGYTGEDGVEISVPGEQCT 532
I++ H D +D + TS C G P L A YT E+G ++ V E
Sbjct: 291 --RGIIREHQDVFVDGKVIGHTTSGTHCPFLGYPIGMALVDAAYT-EEGTKVEV--EVRG 345
Query: 533 HIVEALL 539
IVEA +
Sbjct: 346 RIVEAFV 352
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 36 SRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVEL 95
RKR G TG I ++ + + +G TSG P L I M ++ AY++ G ++
Sbjct: 280 KRKRIGLKVTGRGIIREHQDVFVDGKVIGHTTSGTHCPFLGYPIGMALVDAAYTEEGTKV 339
Query: 96 WVRVRDKRVDVKVTKMPFVK 115
V VR + V+ V +PF K
Sbjct: 340 EVEVRGRIVEAFVVALPFYK 359
>gi|407837782|gb|EKF99848.1| glycine synthase, putative [Trypanosoma cruzi]
Length = 373
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 134/241 (55%), Gaps = 10/241 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L+ LHLS +M FAG+ MP+ Y + HLHTR +FDVSH+ V G
Sbjct: 6 RRTVLHSLHLSRKARMGSFAGYDMPIHYQP-GVVQEHLHTRQAAGLFDVSHVGFFEVRGA 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R ++ E + + V EL G+ L+LF NE GG++DD IV+ + L +++ + K+
Sbjct: 65 DRHKFFEWVTPSGVTELQDGQSALTLFMNESGGVKDDCIVSNYSDHLLAVINAGCKGKII 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS-R 375
L +DR D L L +R ++++QGP +++++ + +L + FM R
Sbjct: 125 THL----KDRLAEFKGDATLVEL---DRAMVSLQGPKAASVMAPFVE-ELDRVKFMWGRR 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
+ GI TLTR Y+GEDG +I VP + VE LL + DV+LAGLGARDSL +
Sbjct: 177 SVRVKGIDITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQNPDVQLAGLGARDSLRTEAG 236
Query: 436 L 436
L
Sbjct: 237 L 237
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 449 NDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR-PCTIAGI 507
DR D L L +R ++++QGP +++++ + +L + FM R + GI
Sbjct: 128 KDRLAEFKGDATLVEL---DRAMVSLQGPKAASVMAPFVE-ELDRVKFMWGRRSVRVKGI 183
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TLTR Y+GEDG +I VP + VE LL + DV+LAGLGARDSL
Sbjct: 184 DITLTRCSYSGEDGFDIIVPIQDAVQFVELLLQNPDVQLAGLGARDSL 231
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 67/128 (52%), Gaps = 18/128 (14%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQS---QIKSGVSRKRTGFTS--------TGVPIRP 51
+ +RL+ KRR GGF G +Q+ + K V R R G S TG+PI
Sbjct: 251 VAARLMWCIPKRRMAEGGFIGHERLQTFVQRAKELVPRLRMGILSVARGPVARTGMPILV 310
Query: 52 GYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKM 111
G D VG +TSG PSP+L +NIAMGYI+ A ++ G + + VR KR+ +VT
Sbjct: 311 G-------DVVVGEVTSGVPSPTLSRNIAMGYIDRAKARAGETVELEVRGKRLPGEVTLP 363
Query: 112 PFVKSNYY 119
FV YY
Sbjct: 364 RFVPQRYY 371
>gi|326316924|ref|YP_004234596.1| glycine cleavage system T protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373760|gb|ADX46029.1| glycine cleavage system T protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 378
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 145/279 (51%), Gaps = 20/279 (7%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
S +SPSA TPL+ LHL G +MVPFAG+SMPVQY A + A HLHTR +FDVS
Sbjct: 1 MSADASPSALLSTPLHALHLELGARMVPFAGYSMPVQYPA-GLMAEHLHTRQAAGLFDVS 59
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
HM Q + G E++ DV L GK L N+ GGI DDL+ +D LF+
Sbjct: 60 HMGQLRLVGADAAAAFETLVPVDVIGLGVGKQRYGLLLNDAGGIIDDLMFVNRGDD-LFV 118
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
+ N + + D+ + Q R + + E+ L+A+QGP ++ L R
Sbjct: 119 IVNGACKAGDIAHI---QARIGH-----RCEVVPMPEQALLALQGPQAAAALARLAPATA 170
Query: 367 SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
+ + FMT IAG C +TR+GYTGEDG EISVP Q + ALL+ +VK GLGA
Sbjct: 171 ALV-FMTGGRFEIAGCDCFVTRSGYTGEDGFEISVPASQAEALARALLAQPEVKPIGLGA 229
Query: 427 RDSL---------SGDITLNTPVPHGSLKLSNDRFKSLG 456
R+SL DI T P +L + + + G
Sbjct: 230 RNSLRLEAGLCLYGNDIDTTTTPPEAALNWAIQKVRRTG 268
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIK--SGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +QI + ++R+R G + VP+R + + +G +TSG PS
Sbjct: 272 AGGFPGADQVLAQIDDPARLARRRVGLVARERVPVREHTALQSPEGAAIGEVTSGLLGPS 331
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ + IAMGY+ PA++++G + VR K V ++V +PF+ Y+
Sbjct: 332 VNQPIAMGYVAPAFAELGTVVHAIVRGKAVPMEVCALPFLPPRYH 376
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E+ L+A+QGP ++ L R + + FMT IAG C +TR+GYTGEDG EISVP
Sbjct: 147 EQALLALQGPQAAAALARLAPATAALV-FMTGGRFEIAGCDCFVTRSGYTGEDGFEISVP 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
Q + ALL+ +VK GLGAR+SL
Sbjct: 206 ASQAEALARALLAQPEVKPIGLGARNSL 233
>gi|126461637|ref|YP_001042751.1| glycine cleavage system aminomethyltransferase T [Rhodobacter
sphaeroides ATCC 17029]
gi|126103301|gb|ABN75979.1| glycine cleavage system T protein [Rhodobacter sphaeroides ATCC
17029]
Length = 377
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 134/238 (56%), Gaps = 15/238 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R PL+DLH+ GG++VPFAG+ MPVQY A + HLHTR+ +FDVSHM Q ++ +
Sbjct: 9 RRLPLHDLHVRLGGRLVPFAGWEMPVQYPA-GVMKEHLHTRTAAGLFDVSHMGQLLLRPR 67
Query: 257 HREEWL----ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
L E + DV L G+ + TNE GGI+DDL+ D L++V NA+
Sbjct: 68 GGMAALGAAFERLMPVDVLGLAEGRQRYGILTNETGGIRDDLMFANR-GDHLYVVVNAAC 126
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
D + AA LG + ++ ++RGL+A+QGP + +L +++ FM
Sbjct: 127 VAEDTAHLRAA------LGDAA--EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFM 177
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP E T EALL+ E+V GLGARDSL
Sbjct: 178 DVIAADWQGAELWISRSGYTGEDGFEISVPVEAITAFAEALLAREEVAPIGLGARDSL 235
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
+ ++ ++RGL+A+QGP + +L +++ FM G ++R+GYTGEDG
Sbjct: 143 EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFMDVIAADWQGAELWISRSGYTGEDG 201
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP E T EALL+ E+V GLGARDSL
Sbjct: 202 FEISVPVEAITAFAEALLAREEVAPIGLGARDSL 235
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 27 IQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIE 85
I + +++G R R G + +G P+R G E+F + VG +TSG PS++ IAMGY+
Sbjct: 283 ILADLEAGPERLRVGLSPSGRAPMREGTELFTPDGTPVGRVTSGGFGPSVEAPIAMGYVA 342
Query: 86 PAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+++ G L VR KR+ V V +PF S Y
Sbjct: 343 TSHAAPGTALVGEVRGKRLPVTVVDLPFRPSTY 375
>gi|417860114|ref|ZP_12505170.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
tumefaciens F2]
gi|338823178|gb|EGP57146.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
tumefaciens F2]
Length = 379
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 142/274 (51%), Gaps = 25/274 (9%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHLS G +MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q +V K
Sbjct: 10 TPLHSLHLSLGARMVPFAGYDMPVQYPA-GVLKEHLQTRTSAGLFDVSHMGQVIVKAKSG 68
Query: 259 EEW-----LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
LE + D+ L G+ FT+E G I DDL++T D LF+V NA+ +
Sbjct: 69 NNADAALALEKLVPVDILGLKEGRQRYGFFTDENGCILDDLMITNR-GDHLFVVVNAACK 127
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ M A L + + L ++R LIA+QGP + +L +S + FM
Sbjct: 128 DADVAHMKA------HLSDECEITLL--DDRALIALQGPRAEAVLAELW-AGVSEMKFMD 178
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL--- 430
+ +PC ++R+GY+GEDG EISVP + I +ALL D + GLGARDSL
Sbjct: 179 VLEVPLHDVPCIVSRSGYSGEDGFEISVPAAKAEEIAKALLEHPDCEPIGLGARDSLRLE 238
Query: 431 ------SGDITLNTPVPHGSLKLSNDRFKSLGKD 458
DI T SL+ + + + G D
Sbjct: 239 AGLCLYGNDIDTTTSPIEASLEWAIQKARRAGGD 272
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQR--VGAITSGCPSPSL 75
GGFPGA I ++K G SR+R G G P+R ++F + + +G +TSG PS+
Sbjct: 275 GGFPGAKRILGELKDGTSRRRVGLKPEGKAPVRGHSKLFADAEGKTEIGEVTSGGFGPSV 334
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ +AMGY+ AY+ G ++ VR K + V V +PF+K Y
Sbjct: 335 EGPVAMGYVPTAYTAPGTAIFAEVRGKYLPVTVAALPFIKPTY 377
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R LIA+QGP + +L +S + FM + +PC ++R+GY+GEDG EISV
Sbjct: 148 DDRALIALQGPRAEAVLAELW-AGVSEMKFMDVLEVPLHDVPCIVSRSGYSGEDGFEISV 206
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + I +ALL D + GLGARDSL
Sbjct: 207 PAAKAEEIAKALLEHPDCEPIGLGARDSL 235
>gi|381151591|ref|ZP_09863460.1| glycine cleavage system T protein [Methylomicrobium album BG8]
gi|380883563|gb|EIC29440.1| glycine cleavage system T protein [Methylomicrobium album BG8]
Length = 358
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 144/266 (54%), Gaps = 27/266 (10%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHRE 259
PL+ LHL G KM PFAG+ MP+ Y A I HLH RS+ + FD+SHM Q V G
Sbjct: 7 PLHALHLELGAKMAPFAGYEMPLHYPA-GIIREHLHCRSQAAFFDISHMGQFKVEGAEAA 65
Query: 260 EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDL 319
LE++ ++D+ L PG ++ T + GG+ DD+IV++T L ++ NA+R+ D
Sbjct: 66 GVLENLTLSDITGLRPGFQKYTVLTLDNGGLLDDIIVSRT-RTGLSIIVNAARKDRDFAH 124
Query: 320 MVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI 379
+ + ++L ++R L A+QGP + ++++ + + L FM +
Sbjct: 125 LSRSLPDLENL-----------QDRALFALQGPKAEAVIRKFSPAA-AELKFMQFAETEL 172
Query: 380 AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITLN-- 437
GI C+++R+GYTGEDG EISV + + LL+++ V AGLGARD+L + L
Sbjct: 173 DGIACSISRSGYTGEDGFEISVNISEAERLARLLLAEDAVAPAGLGARDTLRLEAGLCLY 232
Query: 438 --------TPVPHG---SLKLSNDRF 452
TPV G +K +DRF
Sbjct: 233 GHELNEMITPVEAGLAWIIKKGHDRF 258
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
FPGA I +Q + G + R G + G PIR G + N Q VG +TSG +PSL K +
Sbjct: 258 FPGAEKILAQRQHGPAFVRAGLIAEGKAPIREGATLLNDRGQSVGRVTSGSFAPSLAKPV 317
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
A+ +E AY++ G L+ VR++RV + V +PF+ Y
Sbjct: 318 ALARLETAYAEAGTTLFAEVRERRVMLSVVPLPFIPHRY 356
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R L A+QGP + ++++ + + L FM + GI C+++R+GYTGEDG EISV
Sbjct: 136 QDRALFALQGPKAEAVIRKFSPAA-AELKFMQFAETELDGIACSISRSGYTGEDGFEISV 194
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + LL+++ V AGLGARD+L
Sbjct: 195 NISEAERLARLLLAEDAVAPAGLGARDTL 223
>gi|291457947|ref|ZP_06597337.1| glycine cleavage system T protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419491|gb|EFE93210.1| glycine cleavage system T protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 363
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 130/242 (53%), Gaps = 18/242 (7%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLYD H+ GGK+VPFAGF +PVQY + H+ R K +FDVSHM + + G
Sbjct: 2 ELKTPLYDAHVKAGGKIVPFAGFLLPVQY-ETGVIKEHMAVREKAGLFDVSHMGEVLCQG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
L+ + + + G+ SL NE+GG DDLIV K E+ F+V NA+ +
Sbjct: 61 PDALANLQKLLTNNFDNMVDGQARYSLMCNEKGGCVDDLIVYKRGENDYFIVVNAANQDK 120
Query: 316 DMDLMVAAQ---DRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLD-LSSLYF 371
D M+ Q +F ++ KD IA+QGP + IL++ T D + Y+
Sbjct: 121 DFQWMLDHQFGDAKFTNVSKDY----------AQIALQGPKAMEILRKLTTEDNIPKKYY 170
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARD 428
+AG+PC +++ GYTGEDGVE+ + + + + LL +E + GLGARD
Sbjct: 171 HAVFNAEVAGMPCIVSKTGYTGEDGVELYLENQYAEKMWDKLLEAGKEEGLIPCGLGARD 230
Query: 429 SL 430
+L
Sbjct: 231 TL 232
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLD-LSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
IA+QGP + IL++ T D + Y+ +AG+PC +++ GYTGEDGVE+ + +
Sbjct: 145 IALQGPKAMEILRKLTTEDNIPKKYYHAVFNAEVAGMPCIVSKTGYTGEDGVELYLENQY 204
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ + LL +E + GLGARD+L
Sbjct: 205 AEKMWDKLLEAGKEEGLIPCGLGARDTL 232
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIA 80
F G + I+++ + + R T GV IR ++ A+ + VG TSG P L +A
Sbjct: 267 FIGKAAIEAKGEPKIKRVGLKVTGRGV-IREAEDVL-ADGKVVGHTTSGTHCPFLGYPVA 324
Query: 81 MGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
M ++P YS+VG +L V VR + V+ +V +PF K
Sbjct: 325 MALVDPKYSEVGQKLEVSVRGRSVEAEVVPLPFYK 359
>gi|358067628|ref|ZP_09154106.1| glycine cleavage system T protein [Johnsonella ignava ATCC 51276]
gi|356694281|gb|EHI55944.1| glycine cleavage system T protein [Johnsonella ignava ATCC 51276]
Length = 362
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 134/239 (56%), Gaps = 12/239 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLYD H+ GGK+VPFAGF +PVQY + H+ R++ +FDVSHM + + G
Sbjct: 2 ELKTPLYDAHVKAGGKIVPFAGFLLPVQY-ETGVIKEHMAVRTQAGLFDVSHMGEVLCKG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
K L+ I + + G+ S+ NE+GG DDLIV K E+ F+V NAS +
Sbjct: 61 KDALANLQKILTNNFENMVDGQARYSIMCNEKGGTVDDLIVYKKGENDYFIVVNASNTEK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-HTDLDLSSLYFMTS 374
D M+ +F D+ +SA+ L A+QGP + IL++ T+ ++ Y+
Sbjct: 121 DFKWML--DHKF----GDVEFINVSADYAQL-ALQGPKAMEILRKLTTEENIPKKYYHAV 173
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+AGIPC +++ GYTGEDGVE+ + + + + LL +E + GLGARD+L
Sbjct: 174 FDAEVAGIPCIVSKTGYTGEDGVELYLDSKYAEKMWDKLLEAGKEEGLIPCGLGARDTL 232
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQR-HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + IL++ T+ ++ Y+ +AGIPC +++ GYTGEDGVE+ + +
Sbjct: 145 LALQGPKAMEILRKLTTEENIPKKYYHAVFDAEVAGIPCIVSKTGYTGEDGVELYLDSKY 204
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ + LL +E + GLGARD+L
Sbjct: 205 AEKMWDKLLEAGKEEGLIPCGLGARDTL 232
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIA 80
F G + I+++ ++R GV IR EIF A + +G TSG P L +
Sbjct: 267 FIGKAAIEAKGTPKITRVGLKVLGRGV-IREEQEIF-AGGKLIGHTTSGTHCPFLGYPVG 324
Query: 81 MGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
M I+P Y+++G + V VR +R++V+V +PF K
Sbjct: 325 MALIDPEYAQLGTKFEVEVRGRRIEVEVVALPFYK 359
>gi|221638608|ref|YP_002524870.1| glycine cleavage system aminomethyltransferase T [Rhodobacter
sphaeroides KD131]
gi|221159389|gb|ACM00369.1| Aminomethyltransferase [Rhodobacter sphaeroides KD131]
Length = 377
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 133/238 (55%), Gaps = 15/238 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R PL+DLH+ GG+MVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q ++ +
Sbjct: 9 RRLPLHDLHVRLGGRMVPFAGWEMPVQYPA-GVMKEHLHTRTAAGLFDVSHMGQLLLRPR 67
Query: 257 HREEWL----ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
L E + DV L G+ + TNE GGI+DDL+ D L++V NA+
Sbjct: 68 GGMAALGAAFERLMPVDVLGLAEGRQRYGILTNETGGIRDDLMFANR-GDHLYVVVNAAC 126
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
D + AA LG + ++ ++RGL+A+QGP + +L +++ FM
Sbjct: 127 VAEDTAHLRAA------LGDAA--EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFM 177
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP E EALL+ E+V GLGARDSL
Sbjct: 178 DVIAADWQGAELWISRSGYTGEDGFEISVPVEAIAAFAEALLAREEVAPIGLGARDSL 235
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSG 69
PG R GGF G I + +++G R R G + +G P+R G E+F + VG +TSG
Sbjct: 269 PGGVR--AGGFAGDQRILADLEAGPERLRVGLSPSGRAPMREGTELFTPDGTPVGRVTSG 326
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PS++ IAMGY+ +++ G L VR KR+ V V +PF S Y
Sbjct: 327 GFGPSVEAPIAMGYVATSHAAPGTGLVGEVRGKRLPVTVVDLPFRPSTY 375
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
+ ++ ++RGL+A+QGP + +L +++ FM G ++R+GYTGEDG
Sbjct: 143 EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFMDVIAADWQGAELWISRSGYTGEDG 201
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP E EALL+ E+V GLGARDSL
Sbjct: 202 FEISVPVEAIAAFAEALLAREEVAPIGLGARDSL 235
>gi|426249543|ref|XP_004018509.1| PREDICTED: aminomethyltransferase, mitochondrial [Ovis aries]
Length = 328
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 122/190 (64%), Gaps = 10/190 (5%)
Query: 245 VSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSL 304
+S L+T + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT E L
Sbjct: 6 LSEELETKIFGCDRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTNASEGHL 65
Query: 305 FLVSNASRRKVDMDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRH 361
++VSNA R+ D+ LM QD+ + L G D+ L+ + + L+A+QGP ++ +LQ
Sbjct: 66 YVVSNAGCREKDLTLM---QDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAG 119
Query: 362 TDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVK 420
DL L FMTS + G+ C +TR GYTGEDGVEISVP + H+ ALL + +VK
Sbjct: 120 VADDLRKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLRNPEVK 179
Query: 421 LAGLGARDSL 430
LAGL ARDSL
Sbjct: 180 LAGLAARDSL 189
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 68/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I Q+KS R+R G G P+R I + +GA+TSGCP
Sbjct: 218 GKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCP 277
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYY
Sbjct: 278 SPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVPTNYY 325
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 78 LTLMQDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 134
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 135 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLRNPEVKLAGLAARDSL 189
>gi|77462745|ref|YP_352249.1| glycine cleavage system aminomethyltransferase T [Rhodobacter
sphaeroides 2.4.1]
gi|77387163|gb|ABA78348.1| aminomethyltransferase [Rhodobacter sphaeroides 2.4.1]
Length = 377
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 133/238 (55%), Gaps = 15/238 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R PL+DLH+ GG++VPFAG+ MPVQY A + HLHTR+ +FDVSHM Q V+ +
Sbjct: 9 RRLPLHDLHVRLGGRLVPFAGWEMPVQYPA-GVMKEHLHTRTAAGLFDVSHMGQLVLRPR 67
Query: 257 HREEWL----ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
L E + DV L G+ + TNE GGI+DDL+ D L++V NA+
Sbjct: 68 GGMAALGAAFERLMPVDVLGLAEGRQRYGILTNETGGIRDDLMFANR-GDHLYVVVNAAC 126
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
D + AA LG + ++ ++RGL+A+QGP + +L +++ FM
Sbjct: 127 VAEDTAHLRAA------LGDAA--EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFM 177
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP E EALL+ E+V GLGARDSL
Sbjct: 178 DVIAADWQGAELWISRSGYTGEDGFEISVPVEAIAAFAEALLAREEVAPIGLGARDSL 235
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
+ ++ ++RGL+A+QGP + +L +++ FM G ++R+GYTGEDG
Sbjct: 143 EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFMDVIAADWQGAELWISRSGYTGEDG 201
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP E EALL+ E+V GLGARDSL
Sbjct: 202 FEISVPVEAIAAFAEALLAREEVAPIGLGARDSL 235
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 27 IQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIE 85
I + +++G R R G + +G P+R G E+F + VG +TSG PS++ IAMGY+
Sbjct: 283 ILADLEAGPERLRVGLSPSGRAPMREGTELFTPDGTPVGRVTSGGFGPSVEAPIAMGYVA 342
Query: 86 PAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+++ G L VR KR+ V V +PF S Y
Sbjct: 343 TSHAAPGTALVGEVRGKRLPVTVVDLPFRPSTY 375
>gi|405755477|ref|YP_006678941.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2540]
gi|404224677|emb|CBY76039.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2540]
Length = 362
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYIPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIRGDVSVTNVSSE-YGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYIPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTEIGQEVEVGIRNKKIKAKIVPTPFYK 359
>gi|374339161|ref|YP_005095897.1| glycine cleavage system T protein [Marinitoga piezophila KA3]
gi|372100695|gb|AEX84599.1| glycine cleavage system T protein [Marinitoga piezophila KA3]
Length = 368
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 11/242 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD H+ G KMVPF G+ MPV Y S+ H R+ V +FDVSHM + + GK
Sbjct: 5 KRTPLYDEHVRLGAKMVPFGGWEMPVWYS--SLKEEHNAVRNNVGIFDVSHMGEIDIKGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+++ + +V ++ P + S NE GG+ DDL+ K ++ + LV NAS + D
Sbjct: 63 DAVKFVNYLITNNVEKIKPEEIVYSPMLNENGGVIDDLLAYKYSDEHILLVVNASNIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + F+ K+I ++ IAVQGP + +LQ + +DL ++ +
Sbjct: 123 YNWIAEKAKDFEVEVKNI------SDNIAQIAVQGPKAEEMLQEISGVDLKNISYYNFTE 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGD 433
I GI C ++R GYTGEDG EI + E + LL D K AGLGARD+L +
Sbjct: 177 GRINGIECLISRTGYTGEDGFEIYLDKEAAVPMWRKLLELLPKYDGKPAGLGARDTLRLE 236
Query: 434 IT 435
T
Sbjct: 237 AT 238
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
IAVQGP + +LQ + +DL ++ + I GI C ++R GYTGEDG EI + E
Sbjct: 147 IAVQGPKAEEMLQEISGVDLKNISYYNFTEGRINGIECLISRTGYTGEDGFEIYLDKEAA 206
Query: 532 THIVEALLS---DEDVKLAGLGARDSL 555
+ LL D K AGLGARD+L
Sbjct: 207 VPMWRKLLELLPKYDGKPAGLGARDTL 233
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + + + G+ R+ G G+P R GY++F D+ VG ITSG SP+L K
Sbjct: 267 FIGKEGLLKEKEVGIRRRLKGIEMLEKGIP-RHGYKVF-VGDEEVGFITSGTVSPTLNKP 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
IA+ + Y K E+ V +R+KRV KV K+PF + + T
Sbjct: 325 IALAMLNKPYYKKDTEIEVEIRNKRVKAKVIKIPFYRGSVKT 366
>gi|150021749|ref|YP_001307103.1| glycine cleavage system aminomethyltransferase T [Thermosipho
melanesiensis BI429]
gi|166221576|sp|A6LP67.1|GCST_THEM4 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|149794270|gb|ABR31718.1| glycine cleavage system T protein [Thermosipho melanesiensis BI429]
Length = 363
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 8/240 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPLY+ H+ G KMV FAGF+MP+QY SI L R V +FDVSHM + +V GK
Sbjct: 2 KYTPLYEEHVKLGAKMVDFAGFNMPIQY--TSIKDEVLAVRKNVGMFDVSHMGEVIVEGK 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++++ + D L PG+ + NE GG DDL+ K E+ LV NAS + D
Sbjct: 60 DSTKFVDFLITNDFKNLKPGEIVYTAMCNENGGFVDDLLAYKISEEKAMLVINASNIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M + F D+ L+ S +E LIAVQGP + LQ+ T++DL + + T
Sbjct: 120 FSWMKKISESF-----DVTLENKS-DEYVLIAVQGPNAQKTLQKITNVDLEQIGYYTFTE 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITL 436
+ I ++R GYTGEDG EI + + L + +V AGLGARD L + +L
Sbjct: 174 GNVLDIKAIISRTGYTGEDGFEIYTTDKDGIIKIWKKLLNLNVIPAGLGARDCLRLEASL 233
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E LIAVQGP + LQ+ T++DL + + T + I ++R GYTGEDG EI
Sbjct: 139 DEYVLIAVQGPNAQKTLQKITNVDLEQIGYYTFTEGNVLDIKAIISRTGYTGEDGFEIYT 198
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + L + +V AGLGARD L
Sbjct: 199 TDKDGIIKIWKKLLNLNVIPAGLGARDCL 227
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 10/112 (8%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G ++ Q++ G SR+ GF I R GY++F + + +G +TSG SP+L + I
Sbjct: 261 FMGKEALKRQLEEGTSRRLKGFKIIDKGIARHGYKVFK-DGKEIGYVTSGTFSPTLNQAI 319
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRKVKKKG 131
M IE Y K G + + +R+K V ++ KMPF + + K KKKG
Sbjct: 320 GMALIEKGY-KSGEIIEIEIRNKLVKAEIVKMPFYRGSV-------KSKKKG 363
>gi|264678308|ref|YP_003278215.1| glycine cleavage system protein T [Comamonas testosteroni CNB-2]
gi|262208821|gb|ACY32919.1| glycine cleavage system T protein [Comamonas testosteroni CNB-2]
Length = 378
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 130/232 (56%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G +MVPFAG+SMPVQY + A HLHTR +FDVSHM Q ++ G
Sbjct: 13 TPLFALHQKLGARMVPFAGYSMPVQY-PQGLMAEHLHTRKAAGLFDVSHMGQLLLRGPDA 71
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ DV +L K L +EQGGI DDL+ ED LFL+ N + ++ D
Sbjct: 72 AAALESLMPVDVMDLGLHKQRYGLLLDEQGGILDDLMFVNRGED-LFLIVNGACKEAD-- 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ Q+R S + + ER L+A+QGP + T L R ++ L FMT
Sbjct: 129 -IAHIQNRIGS-----RCEVVPLPERALLALQGPQAVTALSRLIP-GVTQLVFMTGNHFD 181
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G +TR+GYTGEDG EIS+PGE EALL+ +V GLGAR+SL
Sbjct: 182 WQGHALYITRSGYTGEDGFEISLPGEAAEAFAEALLAQPEVAPIGLGARNSL 233
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 19 GGFPGASIIQSQIKS--GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA+I+ Q+++ + RKR G + +P+R + N + Q +G ITSG SP+L
Sbjct: 273 GGFPGAAIVLEQLQNPQSLRRKRVGLIALERIPVREPAVLENMDGQHIGHITSGLLSPTL 332
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +A+ Y+EP Y+ + E++ VR K V +KV PFV + YY
Sbjct: 333 NQPVALAYVEPDYAAIDTEIFAMVRGKPVPMKVVATPFVPTRYY 376
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGP + T L R ++ L FMT G +TR+GYTGEDG EIS+P
Sbjct: 147 ERALLALQGPQAVTALSRLIP-GVTQLVFMTGNHFDWQGHALYITRSGYTGEDGFEISLP 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
GE EALL+ +V GLGAR+SL
Sbjct: 206 GEAAEAFAEALLAQPEVAPIGLGARNSL 233
>gi|289524103|ref|ZP_06440957.1| glycine cleavage system T protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289502759|gb|EFD23923.1| glycine cleavage system T protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 375
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ H++ GG++V F G+++PVQY I HL TR +FDVSHM + V GK
Sbjct: 12 RKTPLYEKHVALGGRVVDFFGWALPVQYSG--IVEEHLATRKAAGLFDVSHMGEITVEGK 69
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+++ + DV +L PGK S E GG+ DDL++ E+ LV NA+ + D
Sbjct: 70 DALKFINYLVTNDVTKLVPGKVMYSPMCYEHGGVVDDLLIYMYDENRFLLVVNAANKDKD 129
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+V +F +D+ ++ IA+QGP + ILQ+ TD+ L + F T +
Sbjct: 130 YQWIVDKSKKFDVKAEDV------SDSYAQIAIQGPKAEGILQKLTDVALDEMKFYTFKD 183
Query: 377 -CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
++ G+ L+R GYTGEDG E+ + HI + LL +E + AGLGARD+L
Sbjct: 184 RVSVGGVDLLLSRTGYTGEDGFELYLLPGDAGHIWDELLKAGKEEGLVPAGLGARDTL 241
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRP-CTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
IA+QGP + ILQ+ TD+ L + F T + ++ G+ L+R GYTGEDG E+ +
Sbjct: 154 IAIQGPKAEGILQKLTDVALDEMKFYTFKDRVSVGGVDLLLSRTGYTGEDGFELYLLPGD 213
Query: 531 CTHIVEALL---SDEDVKLAGLGARDSL 555
HI + LL +E + AGLGARD+L
Sbjct: 214 AGHIWDELLKAGKEEGLVPAGLGARDTL 241
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + + Q + G+ RK G GVP R GYE+ + + VG ITSG +PSL+K
Sbjct: 276 FIGRASLLEQKEKGLKRKIAGLEMVEKGVP-RHGYEV-KSQGKSVGVITSGSYAPSLEKY 333
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+A+ ++ Y ++G E+ V +R K KV + PF K Y
Sbjct: 334 LALALLDIDYVEIGREVHVDIRGKDRLAKVVETPFYKRRY 373
>gi|150389164|ref|YP_001319213.1| glycine cleavage system aminomethyltransferase T [Alkaliphilus
metalliredigens QYMF]
gi|166989722|sp|A6TMY6.1|GCST_ALKMQ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|149949026|gb|ABR47554.1| glycine cleavage system T protein [Alkaliphilus metalliredigens
QYMF]
Length = 369
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 133/244 (54%), Gaps = 12/244 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ ++ H GK++ F G++MPVQ+ I H RS +FDVSHM + + GK
Sbjct: 5 KKTPLFTVYEKHKGKLIDFGGWAMPVQFEG--IIPEHEAVRSNAGLFDVSHMGEVEIKGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+++ + D +++ + S E GG+ DDL+V K ED +LV NA + D
Sbjct: 63 DALNFVQYLITNDASQMEKNQIIYSFMCYENGGVVDDLLVYKFEEDYFYLVINAGNIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+ M+ +S D+ + +S + L A+QGP + ILQ+ T+ DLS L +F R
Sbjct: 123 YEWMLK-----QSTAYDVEVNNISNDVSEL-ALQGPKAEKILQKLTETDLSQLQFFYLQR 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSG 432
TI G+ C ++R GYTGEDG EI V + E LL ++ +K GLGARD+L
Sbjct: 177 DVTIDGVNCLISRTGYTGEDGFEIYVNPSDAVQLWEKLLEVGQEDGLKPIGLGARDTLRF 236
Query: 433 DITL 436
+ L
Sbjct: 237 EAAL 240
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + ILQ+ T+ DLS L +F R TI G+ C ++R GYTGEDG EI V
Sbjct: 147 LALQGPKAEKILQKLTETDLSQLQFFYLQRDVTIDGVNCLISRTGYTGEDGFEIYVNPSD 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E LL ++ +K GLGARD+L
Sbjct: 207 AVQLWEKLLEVGQEDGLKPIGLGARDTL 234
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 10 FPGKRRRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAIT 67
F K ++E F G + Q ++G++RK GF G+P R YE+++ +++G +T
Sbjct: 260 FAVKLKKEVD-FLGKKALIEQKEAGLTRKLVGFEMKDRGIP-RSDYEVYHQG-EKIGFVT 316
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+G SP+LK+NI + I+ Y+++G E+ + +R K+V ++ F K NY
Sbjct: 317 TGYFSPTLKRNIGLALIDAKYAELGNEVDILIRKKQVKAELISKTFYKKNY 367
>gi|322708654|gb|EFZ00231.1| glycine cleavage system T protein [Metarhizium anisopliae ARSEF 23]
Length = 444
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 140/252 (55%), Gaps = 23/252 (9%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYDLH++ GGKMVPFAG SMPVQY S+ SH TR+ S+FDVSHM+Q + G
Sbjct: 54 KKTPLYDLHIAQGGKMVPFAGHSMPVQYANASLAESHHFTRNHASLFDVSHMVQHIFKGP 113
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ +LE + + + L+ F GGI DD ++T+ ED ++V+N + +
Sbjct: 114 NAAAFLEKLTPSGWSNQGIMQSKLTTFLWPGTGGIVDDSVITRIGEDEYYVVTNGACFEK 173
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMT 373
D + +F + +++ + GL+A+QGP ++ IL+ ++++L LYF
Sbjct: 174 DCKYLDEELGKFGA-----GVEWTRLDGSGLVALQGPQAAEILKEALASEVNLDKLYFGN 228
Query: 374 SRPCTIAGI------PCTLTRAGYTGEDGVEISVPG------EQCTHIVEALL---SDED 418
+ + P ++R GYTGEDG EIS G E T VE+LL E
Sbjct: 229 AVYADLKLADGSKTHPVLISRGGYTGEDGFEISFNGKLYPALESTTPAVESLLKIAGPER 288
Query: 419 VKLAGLGARDSL 430
++LAGLGARDSL
Sbjct: 289 LQLAGLGARDSL 300
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 13 KRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
K RR TGGF GA +I Q+ +GV R+R GF G P R G E+ + + VG I
Sbjct: 330 KDRRATGGFHGAEVIIPQLTPKSKGGAGVERRRVGFVVQGAPARDGAEV-QKDGEPVGKI 388
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
TSG PSP+L KNIAMGY++ K G EL V VR ++ VTKMPFV S Y+
Sbjct: 389 TSGVPSPTLGKNIAMGYVKDGLQKAGTELDVVVRGRKRKGIVTKMPFVPSRYH 441
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 17/103 (16%)
Query: 470 GLIAVQGPLSSTILQRH--TDLDLSSLYFMTSRPCTIAGI------PCTLTRAGYTGEDG 521
GL+A+QGP ++ IL+ ++++L LYF + + P ++R GYTGEDG
Sbjct: 198 GLVALQGPQAAEILKEALASEVNLDKLYFGNAVYADLKLADGSKTHPVLISRGGYTGEDG 257
Query: 522 VEISVPG------EQCTHIVEALL---SDEDVKLAGLGARDSL 555
EIS G E T VE+LL E ++LAGLGARDSL
Sbjct: 258 FEISFNGKLYPALESTTPAVESLLKIAGPERLQLAGLGARDSL 300
>gi|406674201|ref|ZP_11081412.1| glycine cleavage system T protein [Bergeyella zoohelcum CCUG 30536]
gi|423317312|ref|ZP_17295217.1| glycine cleavage system T protein [Bergeyella zoohelcum ATCC 43767]
gi|405581445|gb|EKB55474.1| glycine cleavage system T protein [Bergeyella zoohelcum ATCC 43767]
gi|405584612|gb|EKB58502.1| glycine cleavage system T protein [Bergeyella zoohelcum CCUG 30536]
Length = 359
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 129/238 (54%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+T LY+ H+S G KMVPFAGF MPVQY +T H R K +FDVSHM Q + G+
Sbjct: 2 NKTALYNKHVSMGAKMVPFAGFEMPVQYSG--LTEEHFAVREKAGLFDVSHMGQFFIEGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
L+ + +V + G+ S NE GGI DDLIV K +D F+V NAS +D
Sbjct: 60 GALALLQKVTTNNVANIVDGQAQYSCLPNENGGIVDDLIVYKMADDKYFVVVNASN--ID 117
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
D A ++ S G ++ ++E L+A+QGPL++ ILQ+ TD LS + +
Sbjct: 118 KDW--AHISKYNSYGAEMK---NVSDEMSLLAIQGPLATQILQKLTDTALSEIPYYHFTI 172
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
T+AG+ ++ GYTG G EI E + + +L +E + GLGARD+L
Sbjct: 173 GTVAGVSDVIISNTGYTGSGGFEIYFKNEDAEKLWDTILEAGKEEGLLPCGLGARDTL 230
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F I + Q GV+RK GF T G+P R Y + +A +G +TSG SP LK
Sbjct: 264 FVSKEIFEQQKAEGVTRKLVGFEMTERGIP-RHDYPVVDAEGNVIGKVTSGTSSPMLKNG 322
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I M Y++ ++K+G E+++++R+K + KV KMPFVK
Sbjct: 323 IGMAYVDLPHNKLGTEIFIQIRNKNIGAKVVKMPFVK 359
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEIS 525
+E L+A+QGPL++ ILQ+ TD LS + + T+AG+ ++ GYTG G EI
Sbjct: 138 DEMSLLAIQGPLATQILQKLTDTALSEIPYYHFTIGTVAGVSDVIISNTGYTGSGGFEIY 197
Query: 526 VPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
E + + +L +E + GLGARD+L
Sbjct: 198 FKNEDAEKLWDTILEAGKEEGLLPCGLGARDTL 230
>gi|167038901|ref|YP_001661886.1| glycine cleavage system aminomethyltransferase T
[Thermoanaerobacter sp. X514]
gi|300913511|ref|ZP_07130828.1| glycine cleavage system T protein [Thermoanaerobacter sp. X561]
gi|307723474|ref|YP_003903225.1| glycine cleavage system T protein [Thermoanaerobacter sp. X513]
gi|345016726|ref|YP_004819079.1| aminomethyltransferase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939122|ref|ZP_10304766.1| glycine cleavage system T protein [Thermoanaerobacter siderophilus
SR4]
gi|238687585|sp|B0K242.1|GCST_THEPX RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166853141|gb|ABY91550.1| glycine cleavage system T protein [Thermoanaerobacter sp. X514]
gi|300890196|gb|EFK85341.1| glycine cleavage system T protein [Thermoanaerobacter sp. X561]
gi|307580535|gb|ADN53934.1| glycine cleavage system T protein [Thermoanaerobacter sp. X513]
gi|344032069|gb|AEM77795.1| Aminomethyltransferase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392290872|gb|EIV99315.1| glycine cleavage system T protein [Thermoanaerobacter siderophilus
SR4]
Length = 368
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 138/238 (57%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL++L+ + GK++ FAG+++PVQ+ SI + H R+ +FDVSHM + V G+
Sbjct: 5 KKTPLFELYKKYNGKIIDFAGWALPVQFE--SIISEHEAVRNAAGLFDVSHMGEITVKGR 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+++ D+ +L + + N GG+ DDL+V K ++ +LV NA+ + D
Sbjct: 63 EAFNFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDDLLVYKYSDEHFYLVVNAANIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + + ++ ++ +S +E +A+QGP + ILQ+ TD DLS + +F
Sbjct: 123 YKWMKDNKGVY-----EVEIENIS-DEVAELAIQGPKAEEILQKLTDTDLSEIKFFCFKD 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
IAGI C ++R GYTGEDG EI +P + + E ++ + +K AGLGARD+L
Sbjct: 177 NVKIAGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIVEVGKEYGLKPAGLGARDTL 234
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
+E +A+QGP + ILQ+ TD DLS + +F IAGI C ++R GYTGEDG EI
Sbjct: 142 DEVAELAIQGPKAEEILQKLTDTDLSEIKFFCFKDNVKIAGIECLVSRTGYTGEDGFEIY 201
Query: 526 VPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
+P + + E ++ + +K AGLGARD+L
Sbjct: 202 MPNKYAVELWEKIVEVGKEYGLKPAGLGARDTL 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
+ + G F G + Q + G+ RK GF G+P R GYE+ A++Q++G +T+G S
Sbjct: 263 KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIP-RHGYEV-RAHNQKIGYVTTGYFS 320
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
P+LKKNI + I+ Y+++G ++ + +R+K
Sbjct: 321 PTLKKNIGLALIDSKYAQLGNQIEIVIRNK 350
>gi|390355351|ref|XP_001201403.2| PREDICTED: aminomethyltransferase, mitochondrial-like, partial
[Strongylocentrotus purpuratus]
Length = 196
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 3/155 (1%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL D H+ HG KMVPFAG+SMPVQY + + HLH RS ++FDVSHMLQ+ + GK
Sbjct: 37 KRTPLSDFHVEHGAKMVPFAGYSMPVQYKS-GLVKEHLHCRSSAAIFDVSHMLQSRIYGK 95
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R +++ES+ VADV L P GTLSLF N+ GGI DDLI+ +T ED L++VSNA D
Sbjct: 96 DRVKFIESLTVADVEALKPNTGTLSLFINDHGGIIDDLIINQTSEDHLYIVSNAGCADKD 155
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQG 351
+ + F + G D+ F + LIA+QG
Sbjct: 156 QAHIKNKLELFVAEGHDV--SFEPITDMALIALQG 188
>gi|322698018|gb|EFY89792.1| glycine cleavage system T protein [Metarhizium acridum CQMa 102]
Length = 444
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 140/252 (55%), Gaps = 23/252 (9%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYDLH++ GGKMVPFAG SMPVQY S+ SH TR+ S+FDVSHM+Q + G
Sbjct: 54 KKTPLYDLHIAQGGKMVPFAGHSMPVQYANASLAESHHFTRNHASLFDVSHMVQHIFKGP 113
Query: 257 HREEWLESICVADVHELDPGKGTLSLFT-NEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ +LE + + + L+ F GGI DD ++T+ ED ++V+N + +
Sbjct: 114 NAAAFLEKLTPSGWRNQGVMQSKLTTFLWPGTGGIVDDSVITRIGEDEYYVVTNGACFEK 173
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMT 373
D + +F + +++ + GL+A+QGP ++ IL+ ++++L LYF
Sbjct: 174 DCKYLDEELGKFGA-----GVEWTRLDGSGLVALQGPQAAEILKEALASEVNLDKLYFGN 228
Query: 374 SRPCTI------AGIPCTLTRAGYTGEDGVEISVPG------EQCTHIVEALL---SDED 418
+ + P ++R GYTGEDG EIS G E T VE+LL E
Sbjct: 229 AVYADLKLSDGGKTHPVLISRGGYTGEDGFEISFNGKLYPALESTTPAVESLLKIAGPER 288
Query: 419 VKLAGLGARDSL 430
++LAGLGARDSL
Sbjct: 289 LQLAGLGARDSL 300
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query: 13 KRRRETGGFPGASIIQSQIK------SGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAI 66
K RR TGGF GA +I Q+ +GV R+R GF G P R G E+ N + VG I
Sbjct: 330 KDRRATGGFHGAEVIIPQLTPKSKGGAGVERRRVGFVVQGAPARDGAEV-QKNGETVGKI 388
Query: 67 TSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
TSG PSP+L KNIAMGY++ K G EL V VR ++ VTKMPFV S Y+ P
Sbjct: 389 TSGVPSPTLGKNIAMGYVKDGLQKAGTELDVVVRGRKRRGIVTKMPFVPSRYHKP 443
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 17/103 (16%)
Query: 470 GLIAVQGPLSSTILQRH--TDLDLSSLYFMTSRPCTIA------GIPCTLTRAGYTGEDG 521
GL+A+QGP ++ IL+ ++++L LYF + + P ++R GYTGEDG
Sbjct: 198 GLVALQGPQAAEILKEALASEVNLDKLYFGNAVYADLKLSDGGKTHPVLISRGGYTGEDG 257
Query: 522 VEISVPG------EQCTHIVEALL---SDEDVKLAGLGARDSL 555
EIS G E T VE+LL E ++LAGLGARDSL
Sbjct: 258 FEISFNGKLYPALESTTPAVESLLKIAGPERLQLAGLGARDSL 300
>gi|422809428|ref|ZP_16857839.1| Aminomethyltransferase [Listeria monocytogenes FSL J1-208]
gi|378753042|gb|EHY63627.1| Aminomethyltransferase [Listeria monocytogenes FSL J1-208]
Length = 363
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 7 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 64
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ + D
Sbjct: 65 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTEKDF 124
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 125 EWMV------KNIQGDVTVTNVSS-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 178 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 230
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 129 KNIQGDVTVTNVSSE-YGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 187
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 188 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 230
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F ND+ +G
Sbjct: 254 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNDEEIGI 310
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 311 VTSGTQSPTLGTNIGLALIDTAYTELGQEVEVGIRNKKIKAKIVPTPFYK 360
>gi|290893543|ref|ZP_06556526.1| glycine cleavage system T protein [Listeria monocytogenes FSL
J2-071]
gi|404407785|ref|YP_006690500.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2376]
gi|290556888|gb|EFD90419.1| glycine cleavage system T protein [Listeria monocytogenes FSL
J2-071]
gi|404241934|emb|CBY63334.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2376]
Length = 362
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVEGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTAKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIQGDVSVTNVSS-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIQGDVSVTNVSSE-YGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F ND+ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNDKEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTELGQEVEVGIRNKKIKAKIVPTPFYK 359
>gi|433655555|ref|YP_007299263.1| glycine cleavage system T protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293744|gb|AGB19566.1| glycine cleavage system T protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 367
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 128/237 (54%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD HL +G KM+ FAGFSMPVQY SI H R +FDVSHM + ++ GK
Sbjct: 6 KKTPLYDTHLKYGAKMIDFAGFSMPVQYE--SILKEHEAVRKSAGLFDVSHMGEIIIEGK 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ I ++ ++ + S G DDL+V K + LV NAS D
Sbjct: 64 DSEKFINYIISNNIAKISDNQAMYSPMCYANGTTVDDLLVYKFSNEKYMLVVNASNIDKD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ ++ + + K+I + E +A+QGP + ILQ+ T+ +L + +
Sbjct: 124 YNWIIENKSGYNIAVKNI------SNEVSELALQGPKAQEILQKMTEYNLDDMKYYHFDK 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+AG+ C ++R+GYTGEDG EI + + E +L+ + +K AGLGARD+L
Sbjct: 178 INLAGVSCLISRSGYTGEDGFEIFLKNVDAQSMWEKILAVGEEFGIKPAGLGARDTL 234
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
G +I ++ +S E L A+QGP + ILQ+ T+ +L + + +AG+ C ++R+G
Sbjct: 133 GYNIAVKNISNEVSEL-ALQGPKAQEILQKMTEYNLDDMKYYHFDKINLAGVSCLISRSG 191
Query: 516 YTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
YTGEDG EI + + E +L+ + +K AGLGARD+L
Sbjct: 192 YTGEDGFEIFLKNVDAQSMWEKILAVGEEFGIKPAGLGARDTL 234
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q + G+ RK GF G+P R GY++ A +++G +T+G SP+LKKN
Sbjct: 268 FIGRDALFKQKQDGLKRKIVGFEMIENGIP-RHGYDVC-AQGEKIGYVTTGYLSPTLKKN 325
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVT 109
I M I ++ +G E+ + +R+K + VT
Sbjct: 326 IGMALISSKFANIGNEISIIIRNKPLKAIVT 356
>gi|326391263|ref|ZP_08212805.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
JW 200]
gi|325992711|gb|EGD51161.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 368
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 137/238 (57%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL++L+ + GK++ FAG+++PVQ+ SI + H R+ +FDVSHM + V G+
Sbjct: 5 KKTPLFELYKKYNGKIIDFAGWALPVQFE--SIISEHEAVRNAAGLFDVSHMGEITVKGR 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++L+++ D+ +L + + N GG+ DDL+V K ++ +LV NA+ + D
Sbjct: 63 EAFKFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDDLLVYKYSDEHFYLVVNAANIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + ++ +I ++E +A+QGP + ILQ+ TD DLS + +F
Sbjct: 123 YKWMKDNKGVYEVEINNI------SDEISELAIQGPKAEEILQKLTDTDLSQIKFFCFKD 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
IAGI C ++R GYTGEDG EI +P + + E ++ + +K AGLGARD+L
Sbjct: 177 NVKIAGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIVEVGKEYGLKPAGLGARDTL 234
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + ILQ+ TD DLS + +F IAGI C ++R GYTGEDG EI +P +
Sbjct: 147 LAIQGPKAEEILQKLTDTDLSQIKFFCFKDNVKIAGIECLVSRTGYTGEDGFEIYMPNKY 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E ++ + +K AGLGARD+L
Sbjct: 207 AVELWEKIVEVGKEYGLKPAGLGARDTL 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
+ + G F G + Q + G+ RK GF G+P R GYE+ A++Q++G +T+G S
Sbjct: 263 KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIP-RHGYEV-RAHNQKIGYVTTGYFS 320
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
P+LKKNI + I+ Y+++G ++ + +R+K
Sbjct: 321 PTLKKNIGLALIDSKYAQLGNQIEIVIRNK 350
>gi|254852603|ref|ZP_05241951.1| glycine cleavage system T protein [Listeria monocytogenes FSL
R2-503]
gi|254932337|ref|ZP_05265696.1| glycine cleavage system T protein [Listeria monocytogenes HPB2262]
gi|300765412|ref|ZP_07075394.1| glycine cleavage system T protein [Listeria monocytogenes FSL
N1-017]
gi|404280902|ref|YP_006681800.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2755]
gi|404286767|ref|YP_006693353.1| glycine cleavage system T protein [Listeria monocytogenes serotype
7 str. SLCC2482]
gi|405749690|ref|YP_006673156.1| glycine cleavage system T protein [Listeria monocytogenes ATCC
19117]
gi|417317495|ref|ZP_12104112.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes J1-220]
gi|424823109|ref|ZP_18248122.1| Aminomethyltransferase [Listeria monocytogenes str. Scott A]
gi|258605917|gb|EEW18525.1| glycine cleavage system T protein [Listeria monocytogenes FSL
R2-503]
gi|293583893|gb|EFF95925.1| glycine cleavage system T protein [Listeria monocytogenes HPB2262]
gi|300513849|gb|EFK40914.1| glycine cleavage system T protein [Listeria monocytogenes FSL
N1-017]
gi|328475065|gb|EGF45853.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes J1-220]
gi|332311789|gb|EGJ24884.1| Aminomethyltransferase [Listeria monocytogenes str. Scott A]
gi|404218890|emb|CBY70254.1| glycine cleavage system T protein [Listeria monocytogenes ATCC
19117]
gi|404227537|emb|CBY48942.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2755]
gi|404245696|emb|CBY03921.1| glycine cleavage system T protein [Listeria monocytogenes serotype
7 str. SLCC2482]
Length = 362
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIRGDVSVTNVSSE-YGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTEIGQEVEVGIRNKKVKAKIVPTPFYK 359
>gi|333908054|ref|YP_004481640.1| glycine cleavage system T protein [Marinomonas posidonica
IVIA-Po-181]
gi|333478060|gb|AEF54721.1| glycine cleavage system T protein [Marinomonas posidonica
IVIA-Po-181]
Length = 366
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 147/280 (52%), Gaps = 21/280 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L++ HL+ +MV FAG+ MPVQY + + HL TR + +FDVSHM Q ++ G
Sbjct: 2 KRTALHEQHLASDARMVEFAGYEMPVQY-PLGVKKEHLWTREQAGLFDVSHMGQVILKGD 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + LE+I DV L G +FT ++GGI DDL+ +F+V NA+ ++ D
Sbjct: 61 NVKSELEAILPVDVLGLAKGMQRYGMFTTKEGGITDDLMFA-NWGSEVFMVVNAACKEQD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + +D+ + ++ E+R L+A+QGP + + R + + + FM S
Sbjct: 120 IAYL---KDQLPTSQVEV------IEDRALLAIQGPKAREVFARLIP-EAAEMTFMQSLV 169
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL------ 430
G+ ++ +GYTGEDG EISVP +ALLS ++V+ GLGARDSL
Sbjct: 170 FVWQGVEVWVSCSGYTGEDGYEISVPDAHAAEFAQALLSQDEVEWIGLGARDSLRLEAGL 229
Query: 431 ---SGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPE 467
DI NT SL + + + L + QF+ +
Sbjct: 230 CLYGHDIDTNTTPVEASLNWAIQKVRRLEGERAGQFVGAD 269
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+R L+A+QGP + + R + + + FM S G+ ++ +GYTGEDG EISV
Sbjct: 136 EDRALLAIQGPKAREVFARLIP-EAAEMTFMQSLVFVWQGVEVWVSCSGYTGEDGYEISV 194
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P +ALLS ++V+ GLGARDSL
Sbjct: 195 PDAHAAEFAQALLSQDEVEWIGLGARDSL 223
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 14 RRRE---TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSG 69
RR E G F GA +I SQ ++KR G+ G P+R G E+ A+ +VG +TSG
Sbjct: 255 RRLEGERAGQFVGADVILSQFAQKPAQKRVGYLVDGRAPVREGVELVAADGNKVGRVTSG 314
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SPSL + I M Y+ + + ++ +R K++ + MPFV S YY
Sbjct: 315 GFSPSLSQPILMAYVSTSVLESDEPVFAEMRGKQIALTRASMPFVPSRYY 364
>gi|300778775|ref|ZP_07088633.1| aminomethyltransferase [Chryseobacterium gleum ATCC 35910]
gi|300504285|gb|EFK35425.1| aminomethyltransferase [Chryseobacterium gleum ATCC 35910]
Length = 358
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 131/238 (55%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+S G K+VPFAGF MPVQY V T H R K +FDVSHM Q + G
Sbjct: 2 KKTALYDKHVSLGAKIVPFAGFEMPVQYSGV--TEEHFAVREKAGLFDVSHMGQFFIEGP 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++ L+ + +V L+ GK S NE GGI DDLIV K +D F+V NAS D
Sbjct: 60 GSKDLLQFVTTNNVDTLENGKAQYSCLPNENGGIVDDLIVYKMEDDKYFVVVNASNIDKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + ++ + G + +++E L+AVQGP ++ ILQ+ TD++LS + +
Sbjct: 120 WNHI----SKYNTFGAKMT---NASDEMSLLAVQGPKATEILQKLTDVNLSEIPYYHFTV 172
Query: 377 CTIAG-IPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
++AG ++ GYTG G EI E + +A++ +E + GL ARD+L
Sbjct: 173 GSVAGENDVIISNTGYTGSGGFEIYFKNESAEKLWDAVMEAGQEEGIIPCGLAARDTL 230
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F + Q + GVSRK GF T GVP R Y + +A +G +TSG SP K
Sbjct: 264 FVSKDVFAKQKEEGVSRKLVGFELTDKGVP-RHDYPVVDAEGNVIGKVTSGTQSPMKKVG 322
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFV 114
+ + Y++ + K+G E++++VR+K + KV K PFV
Sbjct: 323 LGLAYVDKPHFKLGSEIFIQVRNKNIPAKVVKAPFV 358
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAG-IPCTLTRAGYTGEDGVE 523
+ +E L+AVQGP ++ ILQ+ TD++LS + + ++AG ++ GYTG G E
Sbjct: 136 ASDEMSLLAVQGPKATEILQKLTDVNLSEIPYYHFTVGSVAGENDVIISNTGYTGSGGFE 195
Query: 524 ISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
I E + +A++ +E + GL ARD+L
Sbjct: 196 IYFKNESAEKLWDAVMEAGQEEGIIPCGLAARDTL 230
>gi|254824593|ref|ZP_05229594.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL J1-194]
gi|255520218|ref|ZP_05387455.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL J1-175]
gi|293593831|gb|EFG01592.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL J1-194]
Length = 362
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIRGDVSVTNVSSE-YGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTEIGQEVEVGIRNKKIKAKIVPTPFYK 359
>gi|217964506|ref|YP_002350184.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes HCC23]
gi|386008119|ref|YP_005926397.1| glycine cleavage system T protein [Listeria monocytogenes L99]
gi|386026720|ref|YP_005947496.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes M7]
gi|254797876|sp|B8DFY0.1|GCST_LISMH RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|217333776|gb|ACK39570.1| glycine cleavage system T protein [Listeria monocytogenes HCC23]
gi|307570929|emb|CAR84108.1| glycine cleavage system T protein [Listeria monocytogenes L99]
gi|336023301|gb|AEH92438.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes M7]
Length = 362
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVEGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTAKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIQGDVSVTNVSS-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIQGDVSVTNVSSE-YGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F ND+ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNDEEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTELGQEVEVGIRNKKIKAKIVPTPFYK 359
>gi|46907574|ref|YP_013963.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes serotype 4b str. F2365]
gi|47093626|ref|ZP_00231383.1| glycine cleavage system T protein [Listeria monocytogenes str. 4b
H7858]
gi|254992321|ref|ZP_05274511.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL J2-064]
gi|405752565|ref|YP_006676030.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2378]
gi|424714222|ref|YP_007014937.1| Aminomethyltransferase [Listeria monocytogenes serotype 4b str.
LL195]
gi|59797786|sp|Q71ZX4.1|GCST_LISMF RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|46880842|gb|AAT04140.1| glycine cleavage system T protein [Listeria monocytogenes serotype
4b str. F2365]
gi|47018002|gb|EAL08778.1| glycine cleavage system T protein [Listeria monocytogenes str. 4b
H7858]
gi|404221765|emb|CBY73128.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2378]
gi|424013406|emb|CCO63946.1| Aminomethyltransferase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 362
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPSAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIRGDVSVTNVSSE-YGQLALQGPSAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTEIGQEVEVGIRNKKIKAKIVPTPFYK 359
>gi|303246601|ref|ZP_07332879.1| glycine cleavage system T protein [Desulfovibrio fructosovorans JJ]
gi|302491941|gb|EFL51819.1| glycine cleavage system T protein [Desulfovibrio fructosovorans JJ]
Length = 362
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 125/235 (53%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL D + HGGKMVPFAGF MPVQY SI A H TR+K +VFD+ HM + ++G+
Sbjct: 5 EKTPLSDWNREHGGKMVPFAGFDMPVQY--ASILAEHEQTRNKAAVFDICHMGEFHLSGE 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
L D+ L PGK N+ GG+ DDLI+ DS LV N +R VD
Sbjct: 63 GAASALGLAVTHDLETLAPGKCRYGFLLNDAGGVVDDLIIYCLDVDSYMLVVNGARIAVD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAE-ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ + + R + L F A E I +QGPL+ +L+ D S L +
Sbjct: 123 FETV---KSRLPA-----GLTFTDASAETAKIDLQGPLAFDVLRDRVPGDFSGLKYFNFA 174
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R GYTGE G E+ +P ++ + EALL+D V AGLGARD+L
Sbjct: 175 WTDFDGQKLMVSRTGYTGELGYELFLPADKAVALWEALLADPRVAPAGLGARDTL 229
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E I +QGPL+ +L+ D S L + G ++R GYTGE G E+ +P
Sbjct: 142 ETAKIDLQGPLAFDVLRDRVPGDFSGLKYFNFAWTDFDGQKLMVSRTGYTGELGYELFLP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + EALL+D V AGLGARD+L
Sbjct: 202 ADKAVALWEALLADPRVAPAGLGARDTL 229
>gi|261334973|emb|CBH17967.1| aminomethyltransferase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 375
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 136/244 (55%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ T L+ H+ +M PF+G+ MP+ Y A ++ HLHTR S+FDVSH V G
Sbjct: 6 RHTALHAFHVGRRARMAPFSGYDMPINYAAGAVR-EHLHTREAASIFDVSHFGVVEVFGA 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE++LE + + L GK L++F N++ G++DD IVT+ +D L +V NA +
Sbjct: 65 DREKFLEWLTPSAPSRLPSGKAALTMFLNDRAGVKDDCIVTR-YDDRLVVVVNAGCK--- 120
Query: 317 MDLMVA-AQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
D M+A + D+ L+ E+R ++ VQGP +++ L H + DL L FM R
Sbjct: 121 -DKMIAYMRQSVADFTGDVALEM---EDRAIVTVQGPKAASALAPHVE-DLDKLLFMQGR 175
Query: 376 P-CTIAGIPC-TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGD 433
I G+ TLTR Y+GEDG +I + E IVE LL + DV+ AGL ARD+L +
Sbjct: 176 QDVDIRGMRIKTLTRCSYSGEDGFDIVMREEDALPIVELLLQNPDVQAAGLAARDTLRTE 235
Query: 434 ITLN 437
LN
Sbjct: 236 AGLN 239
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 464 LSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP-CTIAGIPC-TLTRAGYTGEDG 521
L E+R ++ VQGP +++ L H + DL L FM R I G+ TLTR Y+GEDG
Sbjct: 140 LEMEDRAIVTVQGPKAASALAPHVE-DLDKLLFMQGRQDVDIRGMRIKTLTRCSYSGEDG 198
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+I + E IVE LL + DV+ AGL ARD+L
Sbjct: 199 FDIVMREEDALPIVELLLQNPDVQAAGLAARDTL 232
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSG---VSRKRTGFTST---GVPIRPGYEIF 56
+ +R + K R GGF G + +K V R R G + G R G +
Sbjct: 252 VAARCMWCVPKHRMTEGGFVGHERLAQLVKKAKELVPRVRVGILAAPERGPIPRNGTPVL 311
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+ VG +TSG PSP+L +NIA+GY++ +YS +G ++ + VR K V ++ FV
Sbjct: 312 -VEGKCVGVVTSGVPSPTLGRNIALGYVDRSYSNIGQQVGLDVRGKLVKAEIVNSRFVAP 370
Query: 117 NYY 119
YY
Sbjct: 371 RYY 373
>gi|226223949|ref|YP_002758056.1| aminomethyltransferase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|386732086|ref|YP_006205582.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 07PF0776]
gi|406704119|ref|YP_006754473.1| glycine cleavage system T protein [Listeria monocytogenes L312]
gi|259647494|sp|C1L2Q4.1|GCST_LISMC RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|225876411|emb|CAS05120.1| Putative aminomethyltransferase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|384390844|gb|AFH79914.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 07PF0776]
gi|406361149|emb|CBY67422.1| glycine cleavage system T protein [Listeria monocytogenes L312]
Length = 362
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIRGDVSVTNVSSE-YGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q + G++RK G G+P R Y +F N++ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEVGLNRKLVGIELIERGIP-RHDYPVF-LNEEEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTEIGQEVEVGIRNKKVKAKIVPTPFYK 359
>gi|158319124|ref|YP_001511631.1| glycine cleavage system aminomethyltransferase T [Alkaliphilus
oremlandii OhILAs]
gi|166989723|sp|A8MEG4.1|GCST_ALKOO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|158139323|gb|ABW17635.1| glycine cleavage system T protein [Alkaliphilus oremlandii OhILAs]
Length = 368
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 132/244 (54%), Gaps = 12/244 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+D H +GGK+V FAG+ M VQ+ +TA H R+ +FDVSHM + V GK
Sbjct: 5 KRTPLFDAHNRYGGKLVDFAGWEMSVQFEG--LTAEHEAVRNAAGIFDVSHMGEIEVRGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E +++ + DV L+ + + GGI DDL+V K ++ +LV NAS D
Sbjct: 63 DAEAFVQYLVTNDVAALEDNQIVYTFMCYPDGGIVDDLLVYKFNKEYYYLVVNASNSDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + + D+ + +S + +AVQGP + I+Q TD DLS + +F
Sbjct: 123 FAWMNENKGAY-----DVEIINIS-DSVSQVAVQGPKAEEIVQELTDTDLSEIPFFYFKN 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSG 432
I G C ++R GYTGEDG EI V ++ + + ++ D +K AGLGARD+L
Sbjct: 177 DVVINGANCLISRTGYTGEDGFEIYVDNDKVDALWDKIIEVGKDRGLKPAGLGARDTLRF 236
Query: 433 DITL 436
+ TL
Sbjct: 237 EATL 240
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+AVQGP + I+Q TD DLS + +F I G C ++R GYTGEDG EI V ++
Sbjct: 147 VAVQGPKAEEIVQELTDTDLSEIPFFYFKNDVVINGANCLISRTGYTGEDGFEIYVDNDK 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ + ++ D +K AGLGARD+L
Sbjct: 207 VDALWDKIIEVGKDRGLKPAGLGARDTL 234
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q + G+ RK GF G+P R GYE+ D+ +G +T+G SP+LKKN
Sbjct: 269 FIGKDALVRQKEEGLKRKVVGFEMKENGIP-RQGYEV-KVGDKVIGVVTTGYNSPTLKKN 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPF 113
I I+ Y+ +G + ++VR K + +V F
Sbjct: 327 IGYALIDAEYAALGTPIDIQVRKKTLKAEVVSKKF 361
>gi|166064247|gb|ABY79046.1| glycine cleavage system T protein [endosymbiont of Ridgeia
piscesae]
Length = 380
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 137/246 (55%), Gaps = 17/246 (6%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
G S QRT LYDLHL G +MVPFAG+ MPVQY + + H+HTR++ +FDVSHM
Sbjct: 3 GRDMSDLQRTGLYDLHLELGARMVPFAGYEMPVQY-PMGVMKEHIHTRTQAGLFDVSHMG 61
Query: 250 QTVVTGK-----HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSL 304
Q +V K + E++ + L G+ ++FTNE GGI DDL+V D L
Sbjct: 62 QVIVRPKSGDLANAALAFEALVPVSLLALKDGRQRYAMFTNEDGGIMDDLMVANR-GDHL 120
Query: 305 FLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL 364
F+V NA+ ++ D+ M A +L ++ ++ +R L+A+QGPL+ L ++
Sbjct: 121 FVVVNAACKEADIAHMQA------NLSDTCEIEVIT--DRALLALQGPLAEAAL--NSIA 170
Query: 365 DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGL 424
++ + FM ++R+GYTGEDG E+SV +Q ALL+ + V GL
Sbjct: 171 PVAEMKFMDVAVIGSDFGDMWISRSGYTGEDGYEVSVANDQAVAFARALLAMDGVMPIGL 230
Query: 425 GARDSL 430
GARDSL
Sbjct: 231 GARDSL 236
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPS 74
GGFPGA I +++++G +++R G G P+R +F D + +G +TSG P+
Sbjct: 275 AGGFPGAVRILNELENGTAKRRVGILPNGRAPMRAHTMLFANADGGEPMGEVTSGAFGPT 334
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+++ ++MGY+ +++ G ++ VR KR+ V MPF S Y
Sbjct: 335 IERPMSMGYVATEFAETGTTIYAEVRGKRLPATVADMPFRPSTY 378
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGPL+ L ++ ++ + FM ++R+GYTGEDG E+SV
Sbjct: 151 DRALLALQGPLAEAAL--NSIAPVAEMKFMDVAVIGSDFGDMWISRSGYTGEDGYEVSVA 208
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+Q ALL+ + V GLGARDSL
Sbjct: 209 NDQAVAFARALLAMDGVMPIGLGARDSL 236
>gi|410668053|ref|YP_006920424.1| glycine cleavage system aminomethyltransferase T [Thermacetogenium
phaeum DSM 12270]
gi|409105800|gb|AFV11925.1| glycine cleavage system aminomethyltransferase T [Thermacetogenium
phaeum DSM 12270]
Length = 365
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 126/237 (53%), Gaps = 10/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY +H HGG M+ F G+ +PV+Y A I A H R K +FDVSHM + + G+
Sbjct: 4 KRTPLYPMHQKHGGNMIDFGGWELPVEYKATGIIAEHHQVRQKAGLFDVSHMGEVDIRGE 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
EE+++ + D+ L + S GG DDL++ K + FLV NA+ D
Sbjct: 64 KAEEFVQELITNDISALKENQVCYSPMCYPDGGCVDDLLIYKYDRNHYFLVINAA--NTD 121
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
D + + + L+ +S E +A+QGPL+ +LQ D DL + + RP
Sbjct: 122 KDFAWMQEHKLPG----VTLENVS-ETYAELALQGPLAEEVLQSICDTDLKEINYYWFRP 176
Query: 377 CT-IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 430
+AGI C ++R GYTGEDG E+ ++ + EA+L +V GLGARD+L
Sbjct: 177 AVKVAGIECIVSRTGYTGEDGFELYTSPDKACELWEAILEAGKGEVLPIGLGARDTL 233
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT-IAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGPL+ +LQ D DL + + RP +AGI C ++R GYTGEDG E+ ++
Sbjct: 147 LALQGPLAEEVLQSICDTDLKEINYYWFRPAVKVAGIECIVSRTGYTGEDGFELYTSPDK 206
Query: 531 CTHIVEALLS--DEDVKLAGLGARDSL 555
+ EA+L +V GLGARD+L
Sbjct: 207 ACELWEAILEAGKGEVLPIGLGARDTL 233
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + Q + G R TG I R GYEI N Q++G +TSG +P+L KN+
Sbjct: 268 FIGKEALAKQKEKGPDRLLVELEMTGRGIPRAGYEI-QKNGQKIGWVTSGGYAPTLGKNL 326
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ +E Y+ G E+ + +R+K V + + F K
Sbjct: 327 GLALVEKEYAVPGEEIDIIIRNKPVKARTGEGLFYK 362
>gi|456011691|gb|EMF45428.1| Aminomethyltransferase [Planococcus halocryophilus Or1]
Length = 366
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 128/238 (53%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
RTPL++ + +GGK + F G+ +PVQ+ SI H R+K +FDVSHM + VTG
Sbjct: 5 NRTPLFETYSKYGGKTIDFGGWELPVQFS--SIKEEHEAVRTKAGLFDVSHMGEIFVTGA 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++L+ + DV ++ G+ + E GG DDL+V K + LV NAS + D
Sbjct: 63 DSLDYLQHLVTNDVSKIQDGQAQYTAMCYEDGGTVDDLLVYKIADQHYLLVVNASNIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
M A++ SL ++E GL+A QGPLS +LQR TD DLS++ F
Sbjct: 123 FKWMEASKTGDVSLDN-------ASERYGLLAFQGPLSEKVLQRLTDEDLSTIKPFRFKN 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 430
+AG L+R GYTGE+G EI E + E +LS+ E V GLGARD+L
Sbjct: 176 DVKVAGQNVILSRTGYTGENGFEIYAAPESLITLWEKILSEGEAEGVLPVGLGARDTL 233
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + +Q ++GV RK G G+P R GY ++ DQ++G +T+G SP+LKKN
Sbjct: 269 FLGKKALAAQKEAGVPRKLVGIEMIDKGIP-RHGYPVY-MGDQKIGEVTTGTQSPTLKKN 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I + + Y+++G+EL V +R+KR+ K + PF K
Sbjct: 327 IGLALVSSEYAELGIELEVEIRNKRLKAKTVETPFYK 363
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGYTGEDGVE 523
+ E GL+A QGPLS +LQR TD DLS++ F +AG L+R GYTGE+G E
Sbjct: 139 ASERYGLLAFQGPLSEKVLQRLTDEDLSTIKPFRFKNDVKVAGQNVILSRTGYTGENGFE 198
Query: 524 ISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
I E + E +LS+ E V GLGARD+L
Sbjct: 199 IYAAPESLITLWEKILSEGEAEGVLPVGLGARDTL 233
>gi|99082233|ref|YP_614387.1| glycine cleavage system T protein [Ruegeria sp. TM1040]
gi|99038513|gb|ABF65125.1| glycine cleavage system T protein [Ruegeria sp. TM1040]
Length = 374
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 134/237 (56%), Gaps = 14/237 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPL +LH S G KMVPFAG+SMPVQY + I H HTR K +FDVSHM Q ++ G+
Sbjct: 5 KTTPLTELHESLGAKMVPFAGYSMPVQY-PLGIMKEHTHTREKAGLFDVSHMGQVILRGE 63
Query: 257 HREEW---LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
E E + DV L G+ LFTN+ GGI+DDL+ D LF+V NA+ +
Sbjct: 64 SYEALAAAFEKLVPMDVLGLSEGRQRYGLFTNDTGGIEDDLMFANR-GDHLFVVVNAACK 122
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
D+ M AA L ++ ++ ++ +R L+A+QGP + L+ ++++ FM
Sbjct: 123 DADIARMKAA------LEPEVTVEPVT--DRALLALQGPAAEAALEALVP-GVAAMKFMD 173
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISV +ALL+ DV+ GLGARDSL
Sbjct: 174 VATFAYEGGELWISRSGYTGEDGYEISVAEAGAEAFAKALLAHADVEAIGLGARDSL 230
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAIT 67
PG R GGFPGA I + + RKR G G P+R G ++ + + +G IT
Sbjct: 264 PGGDR--AGGFPGADAIFADLGGKAPRKRVGLKPEGRAPMREGVVLYASAEGGDPIGTIT 321
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SG P++ +AMGY+ ++ + +++ +R KRV V V K+PFV +N+
Sbjct: 322 SGGFGPTVGGPVAMGYVTAEHAALDTQVFGELRGKRVPVTVAKLPFVAANF 372
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + L+ ++++ FM G ++R+GYTGEDG EISV
Sbjct: 144 DRALLALQGPAAEAALEALVP-GVAAMKFMDVATFAYEGGELWISRSGYTGEDGYEISVA 202
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ALL+ DV+ GLGARDSL
Sbjct: 203 EAGAEAFAKALLAHADVEAIGLGARDSL 230
>gi|258405679|ref|YP_003198421.1| glycine cleavage system T protein [Desulfohalobium retbaense DSM
5692]
gi|257797906|gb|ACV68843.1| glycine cleavage system T protein [Desulfohalobium retbaense DSM
5692]
Length = 359
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 145/304 (47%), Gaps = 23/304 (7%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL D H HG KM PFAG++MP+QY I A H HTR++ ++FD+ HM + +TG
Sbjct: 7 TPLTDWHQDHGAKMAPFAGWNMPIQY--EGILAEHKHTRTQAALFDICHMGECRITGPGA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ L+ I ++ L PG+ + +G +QDDLIV ED LV NA+ ++ D
Sbjct: 65 RDGLDRIVTHNLERLRPGRCSYGFLLTPEGTVQDDLIVYCLDEDDFMLVVNAACQETDFT 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ + L + + +S E I +QGP S L+R L F P +
Sbjct: 125 WLR------EHLPAGVAFEDIS-EATAKIDLQGPTSIAALERVLPGAWRELKFFGHCPSS 177
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITL-- 436
G ++R GYTGE G EI +P EQ + E L EDVK AGLGARD+L + L
Sbjct: 178 FGGQSLRVSRTGYTGELGYEIYLPREQAVSLWEQFLDGEDVKPAGLGARDTLRLEAGLLL 237
Query: 437 --------NTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD 488
+TP G + + +GKD L L+A+Q T T
Sbjct: 238 YGQDLDREHTPAEAGYAGMLTSQAPYIGKDNALTVRDK----LVALQFEGRRTAHHHDTV 293
Query: 489 LDLS 492
LD S
Sbjct: 294 LDAS 297
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 46/89 (51%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E I +QGP S L+R L F P + G ++R GYTGE G EI +
Sbjct: 141 EATAKIDLQGPTSIAALERVLPGAWRELKFFGHCPSSFGGQSLRVSRTGYTGELGYEIYL 200
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P EQ + E L EDVK AGLGARD+L
Sbjct: 201 PREQAVSLWEQFLDGEDVKPAGLGARDTL 229
>gi|399023873|ref|ZP_10725924.1| glycine cleavage system T protein [Chryseobacterium sp. CF314]
gi|398081954|gb|EJL72721.1| glycine cleavage system T protein [Chryseobacterium sp. CF314]
Length = 358
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 131/238 (55%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H+S G K+VPFAGF MPVQY V T H R K +FDVSHM Q + G
Sbjct: 2 KKTALYDKHVSLGAKIVPFAGFEMPVQYSGV--TEEHFAVREKAGLFDVSHMGQFFIEGP 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++ L+ + +V L+ GK S NE GGI DDLIV K +D F+V NAS D
Sbjct: 60 GSKDLLQLVTTNNVDALENGKAQYSCLPNENGGIVDDLIVYKMEDDKYFVVVNASNIDKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + ++ + G + +++E L+A+QGP ++ ILQ+ T+ +LS + +
Sbjct: 120 WNHI----SKYNTFGAKMT---NASDEMSLLAIQGPKATEILQKLTEANLSEIPYYNFTV 172
Query: 377 CTIAGI-PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
++AG+ ++ GYTG G EI + +A+++ E + AGL ARD+L
Sbjct: 173 GSVAGVNNVIISNTGYTGSGGFEIYFNNGNAKQLWDAIINAGETEGIIPAGLAARDTL 230
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F Q + GV+RK GF GVP R Y + +A +G +TSG SP K
Sbjct: 264 FVSKDTFAQQKEEGVTRKLVGFELQDKGVP-RHDYPVVDAEGNVIGKVTSGTQSPMKKIG 322
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFV 114
+ + Y++ + K+G E++++VR+K + KV K PFV
Sbjct: 323 LGLAYVDKPHFKLGSEIFIQVRNKNIPAKVVKAPFV 358
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI-PCTLTRAGYTGEDGVE 523
+ +E L+A+QGP ++ ILQ+ T+ +LS + + ++AG+ ++ GYTG G E
Sbjct: 136 ASDEMSLLAIQGPKATEILQKLTEANLSEIPYYNFTVGSVAGVNNVIISNTGYTGSGGFE 195
Query: 524 ISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
I + +A+++ E + AGL ARD+L
Sbjct: 196 IYFNNGNAKQLWDAIINAGETEGIIPAGLAARDTL 230
>gi|436842315|ref|YP_007326693.1| Aminomethyltransferase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432171221|emb|CCO24592.1| Aminomethyltransferase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 353
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 126/237 (53%), Gaps = 9/237 (3%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
SA + TPL + H +G K+VPFAGF MPVQY I H HTR K VFD+SHM + +
Sbjct: 2 SALRTTPLTEWHRENGAKLVPFAGFEMPVQYKG--IIVEHKHTREKAGVFDISHMGEFKL 59
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+GK ++ L I ++ L PGK N++GG+ DDLI+ EDS LV N S
Sbjct: 60 SGKGAKDALNKIVTQNLDTLAPGKCRYGFLPNDKGGVLDDLIIYCLAEDSYMLVVNGSCE 119
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D + + + L + ++ +S E I +QGPL+ IL++ D L +
Sbjct: 120 EGDFNWIDS------RLPEGLNFDNVSY-ETAKIDLQGPLALDILEKVFGRDFKHLKYFN 172
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R GYTGE G E +P ++ + E ++DE V+ GLGARD+L
Sbjct: 173 FEETEFDGYKLIISRTGYTGELGYEFYLPADKAQSLWEKFIADERVEPIGLGARDTL 229
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E I +QGPL+ IL++ D L + G ++R GYTGE G E +P
Sbjct: 142 ETAKIDLQGPLALDILEKVFGRDFKHLKYFNFEETEFDGYKLIISRTGYTGELGYEFYLP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + E ++DE V+ GLGARD+L
Sbjct: 202 ADKAQSLWEKFIADERVEPIGLGARDTL 229
>gi|419760870|ref|ZP_14287132.1| glycine cleavage system aminomethyltransferase T [Thermosipho
africanus H17ap60334]
gi|407513961|gb|EKF48829.1| glycine cleavage system aminomethyltransferase T [Thermosipho
africanus H17ap60334]
Length = 436
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 130/241 (53%), Gaps = 10/241 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPLY+ HL G KMV FAGF MP+QY I + R V +FDVSHM Q +V GK
Sbjct: 75 KYTPLYEQHLKLGAKMVEFAGFQMPIQY--TGIKDEVIAVRKDVGMFDVSHMGQVLVEGK 132
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++ + D L G+ + NE GG DDL+ K ++ FLV NA+ + D
Sbjct: 133 DSTNFVNYLITNDFKNLSNGEIVYTAMCNENGGFIDDLLAYKISDEKAFLVINAANIEKD 192
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M +L D+ L+ S ++ LIA+QGP + LQ+ TD+DL S+ + T
Sbjct: 193 FEWMKNV-----ALNFDVKLENKS-DDYALIAIQGPNAQKTLQKLTDIDLESIGYYTFVF 246
Query: 377 CTIAGIPCTLTRAGYTGEDGVEI-SVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
+ + ++R GYTGEDG EI + + I E LL + VK AGLGARD+L + +
Sbjct: 247 GKVKDVEALISRTGYTGEDGFEIYTTDKDGIVKIWEELL-NLGVKPAGLGARDTLRLEAS 305
Query: 436 L 436
L
Sbjct: 306 L 306
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L D+ L+ S ++ LIA+QGP + LQ+ TD+DL S+ + T + + ++R
Sbjct: 200 ALNFDVKLENKS-DDYALIAIQGPNAQKTLQKLTDIDLESIGYYTFVFGKVKDVEALISR 258
Query: 514 AGYTGEDGVEI-SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EI + + I E LL + VK AGLGARD+L
Sbjct: 259 TGYTGEDGFEIYTTDKDGIVKIWEELL-NLGVKPAGLGARDTL 300
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + ++ Q++ G+ R+ GF I R GY++F + + +G +TSG SP+L ++I
Sbjct: 334 FVGKAALEKQLEEGLKRRLKGFKLIDKGIARHGYKVFK-DGREIGVVTSGTFSPTLDESI 392
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRKVKKK 130
M IE Y K G + + +R+K V ++ KMPF + + +R KKK
Sbjct: 393 GMALIETGY-KSGDIIEIEIRNKLVKAEIVKMPFYRGS------VRSKKKK 436
>gi|323488913|ref|ZP_08094150.1| glycine cleavage system T protein [Planococcus donghaensis MPA1U2]
gi|323397305|gb|EGA90114.1| glycine cleavage system T protein [Planococcus donghaensis MPA1U2]
Length = 366
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 132/239 (55%), Gaps = 15/239 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL++ + +GGK + F G+ +PVQ+ SI H R+K +FDVSHM + VTG
Sbjct: 5 KRTPLFETYSKYGGKTIDFGGWELPVQFS--SIKEEHEAVRTKAGLFDVSHMGEIFVTGA 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++L+ + DV ++ G+ + E GG DDL+V K + LV NAS + D
Sbjct: 63 DSLDYLQHLVTNDVSKIQDGQAQYTAMCYEDGGTVDDLLVYKIADQHYLLVVNASNIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLY-FMTS 374
D M A++ D+ L +A ER GL+A QGPLS +LQR T+ DLS++ F
Sbjct: 123 FDWMEASKT------GDVTLD--NASERFGLLAFQGPLSEQVLQRLTEEDLSTIKPFRFK 174
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 430
+AG L+R GYTGE+G EI E + E +L++ E V GLGARD+L
Sbjct: 175 NDVEVAGQKVILSRTGYTGENGFEIYAAPEALVSLWEKILTEGEPEGVLPVGLGARDTL 233
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + +Q ++GV RK G G+P R GY ++ DQ++G +T+G SP+LKKN
Sbjct: 269 FLGKKALAAQKEAGVPRKLVGIEMIDKGIP-RHGYPVY-VGDQKIGEVTTGTQSPTLKKN 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I + + Y+++G+EL V +R+KR+ K + PF K
Sbjct: 327 IGLALVSSEYAELGIELEVEIRNKRLKAKTVETPFYK 363
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGYTGEDGVE 523
+ E GL+A QGPLS +LQR T+ DLS++ F +AG L+R GYTGE+G E
Sbjct: 139 ASERFGLLAFQGPLSEQVLQRLTEEDLSTIKPFRFKNDVEVAGQKVILSRTGYTGENGFE 198
Query: 524 ISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
I E + E +L++ E V GLGARD+L
Sbjct: 199 IYAAPEALVSLWEKILTEGEPEGVLPVGLGARDTL 233
>gi|91762206|ref|ZP_01264171.1| glycine cleavage system protein T2 [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718008|gb|EAS84658.1| glycine cleavage system protein T2 [Candidatus Pelagibacter ubique
HTCC1002]
Length = 368
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 127/235 (54%), Gaps = 15/235 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LY LH HG K VPFAG+ MP+QY + I H TR +FDVSHM Q + G
Sbjct: 5 KTALYSLHQKHGAKFVPFAGYQMPIQY-SKGIIEEHKSTRENAGIFDVSHMGQLFIKGDD 63
Query: 258 R-EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + LE I A++ + + S N++ GI DDLI+TK +E +V NA+ + D
Sbjct: 64 KLAKDLEKIFPAELSKAKLNQSKYSFLMNDEAGIYDDLIITK-VEGGFNIVLNAACKNTD 122
Query: 317 MDLMVA-AQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
L+ +D++ + + +EE LIA+QGP + IL++ + +S L FM
Sbjct: 123 FKLLTKLLEDKY---------EMILSEELSLIAIQGPKAVQILEKIIN-GVSDLKFMNGD 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+TR+GYTGEDG EIS+ E V+ L+ DE L GLGARD+L
Sbjct: 173 TFNYLKEDVYITRSGYTGEDGFEISIKNENAEAFVQKLI-DEGANLIGLGARDTL 226
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCP 71
K R GGF G I+SQI+ GVS+ R G G I R IF+ +D+ +G ITSG
Sbjct: 256 KNRILEGGFIGYEKIKSQIEKGVSKIRVGIKPEGRIIAREKTSIFSEDDKNIGEITSGTF 315
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PS++ +AMGY+E ++SK+ ++++ VR K+ ++ +PF K +Y
Sbjct: 316 GPSVQAPVAMGYVENSFSKIDTKVFLEVRGKKYPAIISNLPFYKKSY 362
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 433 DITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLS 492
+I LN + KL L +D + LS EE LIA+QGP + IL++ + +S
Sbjct: 111 NIVLNAACKNTDFKL----LTKLLEDKYEMILS-EELSLIAIQGPKAVQILEKIIN-GVS 164
Query: 493 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 552
L FM +TR+GYTGEDG EIS+ E V+ L+ DE L GLGAR
Sbjct: 165 DLKFMNGDTFNYLKEDVYITRSGYTGEDGFEISIKNENAEAFVQKLI-DEGANLIGLGAR 223
Query: 553 DSL 555
D+L
Sbjct: 224 DTL 226
>gi|390935438|ref|YP_006392943.1| aminomethyltransferase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570939|gb|AFK87344.1| Aminomethyltransferase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 366
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 128/237 (54%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD+H +G KM+ FAGF MPVQY SI H R +FDVSHM + +V G+
Sbjct: 5 KRTPLYDIHKKYGAKMIDFAGFEMPVQYE--SILKEHEAVRKNAGLFDVSHMGEIIVEGR 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + D+ ++ + S G DDL+V K + LV NAS D
Sbjct: 63 DSEKFINYMVTNDITKISANQAMYSPMCYPNGTTVDDLLVYKFSCEKYMLVVNASNIDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ ++ F D+ ++ S E L A+QGP S IL++ T+ DL SL +
Sbjct: 123 YKWLWKNKNGF-----DVEIKDESGEISEL-ALQGPKSQEILEKITNYDLDSLKYYHFDY 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDV---KLAGLGARDSL 430
+ GI C ++R+GYTGEDG EI + E + E +LS +V K AGLGARD+L
Sbjct: 177 MDLDGINCLISRSGYTGEDGFEIFLKNEYVAKMWEKILSVGEVLGIKPAGLGARDTL 233
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
+A+QGP S IL++ T+ DL SL + + GI C ++R+GYTGEDG EI + E
Sbjct: 147 LALQGPKSQEILEKITNYDLDSLKYYHFDYMDLDGINCLISRSGYTGEDGFEIFLKNEYV 206
Query: 532 THIVEALLSDEDV---KLAGLGARDSL 555
+ E +LS +V K AGLGARD+L
Sbjct: 207 AKMWEKILSVGEVLGIKPAGLGARDTL 233
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + +Q + G+ RK GF T +P R GY+++ A +++G +T+G +P+LKKN
Sbjct: 267 FIGKEALLNQKEGGLKRKIVGFEIADTAIP-RHGYDVY-AEGEKIGYVTTGYLAPTLKKN 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVT 109
I M I+ ++ +G E+ + +R+K VT
Sbjct: 325 IGMALIKSQFTTIGNEINIIIRNKPYKAFVT 355
>gi|395009944|ref|ZP_10393378.1| glycine cleavage system T protein [Acidovorax sp. CF316]
gi|394311999|gb|EJE49266.1| glycine cleavage system T protein [Acidovorax sp. CF316]
Length = 380
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 137/262 (52%), Gaps = 19/262 (7%)
Query: 204 LHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLE 263
LHL G +MVPFAG+SMPVQY A + A H+HTR+ +FDVSHM Q + G E
Sbjct: 19 LHLELGARMVPFAGYSMPVQYPA-GLMAEHVHTRTAAGLFDVSHMGQLQLVGPDAAAAFE 77
Query: 264 SICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAA 323
++ DV +L GK L ++G I DDL+ D+LF++ N + + D+ + A
Sbjct: 78 TLVPVDVVDLPVGKQRYGLLLTDEGTIIDDLMFFNQGNDTLFVIVNGACKVGDIAHIQA- 136
Query: 324 QDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP 383
+G+ + + L+A+QGP + T L R + L FMT TIAG
Sbjct: 137 -----RIGQ--RCDVVPMPDHALLALQGPQAVTALARLAP-GIEKLVFMTGGSYTIAGCD 188
Query: 384 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL---------SGDI 434
C +TR+GYTGEDG EISVP Q + ALL+ +VK GLGAR+SL DI
Sbjct: 189 CFVTRSGYTGEDGFEISVPAAQADTLARALLAQPEVKPIGLGARNSLRLEAGLCLYGNDI 248
Query: 435 TLNTPVPHGSLKLSNDRFKSLG 456
T P +L + + + G
Sbjct: 249 DTTTTPPEAALNWAIQKVRRTG 270
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIKSGVS--RKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +QI + S RKR G + VP+R E+ + + Q++G +TSG P+
Sbjct: 274 AGGFPGADKVLAQIDNPASLPRKRVGLVALERVPVREHTELQSTDGQKIGEVTSGLLGPT 333
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ + +AMGY+ PA++ +G + VR K V ++V MPF +NY+
Sbjct: 334 VNEPVAMGYVSPAFAAIGTRVNAIVRGKAVAMEVRAMPFTPANYF 378
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+ L+A+QGP + T L R + L FMT TIAG C +TR+GYTGEDG EISVP
Sbjct: 149 DHALLALQGPQAVTALARLAP-GIEKLVFMTGGSYTIAGCDCFVTRSGYTGEDGFEISVP 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
Q + ALL+ +VK GLGAR+SL
Sbjct: 208 AAQADTLARALLAQPEVKPIGLGARNSL 235
>gi|347548733|ref|YP_004855061.1| putative aminomethyltransferase [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981804|emb|CBW85777.1| Putative aminomethyltransferase [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 362
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 136/234 (58%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + V G
Sbjct: 6 KTPIHPLYEKYGAKTIDFGGWDLPVQFSG--IKAEHEAVRTNAGLFDVSHMGEIFVEGAE 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V + E LV NA+ + D
Sbjct: 64 STAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYRLSETKYLLVVNAANTEKDY 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
D +V K++ D+ + +S+ + G +A+QGP + IL + T++DLS++ +F
Sbjct: 124 DWIV------KNIKGDVTVSNVSS-KYGQLALQGPDAEKILTKLTNVDLSAISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
IAG+ ++R+GYTGEDG EI +P E T + EA++++E + + GLGARD+L
Sbjct: 177 ADIAGVKTIISRSGYTGEDGFEIYMPSEDATKVFEAIMAEEVLPI-GLGARDTL 229
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Query: 470 GLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
G +A+QGP + IL + T++DLS++ +F IAG+ ++R+GYTGEDG EI +P
Sbjct: 144 GQLALQGPDAEKILTKLTNVDLSAISFFGFVEDADIAGVKTIISRSGYTGEDGFEIYMPS 203
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
E T + EA++++E + + GLGARD+L
Sbjct: 204 EDATKVFEAIMAEEVLPI-GLGARDTL 229
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N + +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLTRKLVGIELIERGIP-RHDYPVF-LNGKEIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ A++++G E+ + +R+K++ KV PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDIAHTELGQEVEIGIRNKKIKAKVVATPFYK 359
>gi|452851148|ref|YP_007492832.1| Aminomethyltransferase [Desulfovibrio piezophilus]
gi|451894802|emb|CCH47681.1| Aminomethyltransferase [Desulfovibrio piezophilus]
Length = 361
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 123/237 (51%), Gaps = 9/237 (3%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL D H +G KM PFAGF MPVQY + I H HTR++ +FD+SHM + +TGK
Sbjct: 6 KTPLTDWHRENGAKMAPFAGFDMPVQYKGIMI--EHKHTRTQTGIFDISHMGEFALTGKG 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+ L + D+ L P K NE+GGI DDLI+ ED LV N + R+ D
Sbjct: 64 AMKALNKVVSHDLETLAPNKCRYGFLLNERGGIHDDLIIYCLAEDEYMLVVNGACREKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+ + + L + L +S E+ I VQGP S +L + L +
Sbjct: 124 NHIQS------HLPDSLFLADIS-EQTAKIDVQGPQSLDVLNTLLGSQWNQLKYFCFAND 176
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDI 434
G P ++R GYTGE G E+ +P E I E L+ DE V+ GLGARD+L +I
Sbjct: 177 DSQGFPMIVSRTGYTGELGYELYLPSEAALGIWEKLIKDERVQPIGLGARDTLRLEI 233
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E+ I VQGP S +L + L + G P ++R GYTGE G E+ +
Sbjct: 141 EQTAKIDVQGPQSLDVLNTLLGSQWNQLKYFCFANDDSQGFPMIVSRTGYTGELGYELYL 200
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E I E L+ DE V+ GLGARD+L
Sbjct: 201 PSEAALGIWEKLIKDERVQPIGLGARDTL 229
>gi|284801733|ref|YP_003413598.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 08-5578]
gi|284994875|ref|YP_003416643.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 08-5923]
gi|284057295|gb|ADB68236.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 08-5578]
gi|284060342|gb|ADB71281.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes 08-5923]
Length = 384
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 28 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 85
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 86 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 145
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 146 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVED 198
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 199 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 251
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 164 EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYM 223
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EA+L+ E V GLGARD+L
Sbjct: 224 PSADAGKVFEAILA-EGVAPIGLGARDTL 251
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++++G
Sbjct: 275 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEQIGV 331
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ + +R+K+V K+ PF K
Sbjct: 332 VTSGTQSPTLGINIGLALIDTAYTELGQEVEIGIRNKKVKAKIVPTPFYK 381
>gi|386043659|ref|YP_005962464.1| glycine cleavage system T protein [Listeria monocytogenes 10403S]
gi|404410646|ref|YP_006696234.1| glycine cleavage system T protein [Listeria monocytogenes SLCC5850]
gi|345536893|gb|AEO06333.1| glycine cleavage system T protein [Listeria monocytogenes 10403S]
gi|404230472|emb|CBY51876.1| glycine cleavage system T protein [Listeria monocytogenes SLCC5850]
Length = 362
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EA+L+ E V GLGARD+L
Sbjct: 202 PSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++++G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEQIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ + +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGINIGLALIDTAYTELGQEVEIGIRNKKVKAKIVPTPFYK 359
>gi|16803388|ref|NP_464873.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes EGD-e]
gi|254827609|ref|ZP_05232296.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL N3-165]
gi|386050324|ref|YP_005968315.1| glycine cleavage system T protein [Listeria monocytogenes FSL
R2-561]
gi|404283839|ref|YP_006684736.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2372]
gi|24636859|sp|Q8Y7D5.1|GCST_LISMO RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|16410764|emb|CAC99426.1| lmo1348 [Listeria monocytogenes EGD-e]
gi|258599987|gb|EEW13312.1| glycine cleavage system aminomethyltransferase T [Listeria
monocytogenes FSL N3-165]
gi|346424170|gb|AEO25695.1| glycine cleavage system T protein [Listeria monocytogenes FSL
R2-561]
gi|404233341|emb|CBY54744.1| glycine cleavage system T protein [Listeria monocytogenes SLCC2372]
Length = 362
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EA+L+ E V GLGARD+L
Sbjct: 202 PSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++++G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEQIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGINIGLALIDTAYTELGQEVEVGIRNKKVKAKIVPTPFYK 359
>gi|384919275|ref|ZP_10019331.1| glycine cleavage system T protein [Citreicella sp. 357]
gi|384466886|gb|EIE51375.1| glycine cleavage system T protein [Citreicella sp. 357]
Length = 374
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 136/240 (56%), Gaps = 23/240 (9%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTV---V 253
+TPLYDLHLS G KMVPFAG+ MPVQY + + HLHTR+ +FDVSHM Q + +
Sbjct: 8 HQTPLYDLHLSLGAKMVPFAGYDMPVQY-RMGVMKEHLHTRAACGLFDVSHMGQVILRPL 66
Query: 254 TGKHREE--WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS 311
+G + LE + DV L G+ ++FT+E GG+ DDL+V + +D+LFLV NA+
Sbjct: 67 SGDVADAALALERLVPVDVLGLKTGRQRYAMFTDEAGGMLDDLMVAR-WDDALFLVVNAA 125
Query: 312 RRKVDM-DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
+ D+ L A D + L +D R LIA+QGP ++ L R + ++
Sbjct: 126 CKDADIAHLRAALSDTCEILVQD----------RALIALQGPDAAAALARLVP-GIETMR 174
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
FM +R A ++R+GYTGEDG EIS+P LL +V GLGARDSL
Sbjct: 175 FMDAR----AFGDLWISRSGYTGEDGYEISLPAAGVHDFATRLLDMPEVAPIGLGARDSL 230
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIF--NANDQRVGAITSGCPSPSLKK 77
FPGA +I +Q+ G R G G P+R G +F + +G +TSG PS+
Sbjct: 272 FPGADVILAQLSDGAETARVGLRPEGRAPMREGVALFADGTGGEPIGRVTSGGFGPSVGG 331
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+AMGY+ S G ++ VR KR+ V V +PFV+ Y
Sbjct: 332 PVAMGYLPAPLSSPGTRVYGEVRGKRMAVDVAALPFVQQGY 372
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R LIA+QGP ++ L R + ++ FM +R A ++R+GYTGEDG EIS+
Sbjct: 147 QDRALIALQGPDAAAALARLVP-GIETMRFMDAR----AFGDLWISRSGYTGEDGYEISL 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P LL +V GLGARDSL
Sbjct: 202 PAAGVHDFATRLLDMPEVAPIGLGARDSL 230
>gi|124003958|ref|ZP_01688805.1| glycine cleavage system T protein [Microscilla marina ATCC 23134]
gi|123990537|gb|EAY30017.1| glycine cleavage system T protein [Microscilla marina ATCC 23134]
Length = 365
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 132/238 (55%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T L D+H++ GGKMV FAG+SMPV+Y S H R V VFDVSHM + ++ G+
Sbjct: 9 KQTALNDIHVALGGKMVEFAGYSMPVRY--TSDKEEHFAVRENVGVFDVSHMGEFLLKGE 66
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ ++ + D +L PG+ S N+QGGI DDL++ E+ +LV NAS + D
Sbjct: 67 GALDLIQKVSSNDASKLYPGRVQYSCLPNDQGGIVDDLVIYMIAENEYYLVVNASNVQKD 126
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
D + + + G + + LS ++ ++A+QGP ++ LQ TD+ L + F T
Sbjct: 127 WDWI----SKHNTYG--VEMTNLS-DQTSMLAIQGPKATQALQSLTDVKLDDMKFYTFEK 179
Query: 377 CTIAGIPCTLTRA-GYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
T AG+P + A GYTG GVE+ VP E I + D ++ GLGARD+L
Sbjct: 180 ATFAGVPDVIISATGYTGLGGVELYVPNEHAETIWNKIFEAGKDYHIQAIGLGARDTL 237
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
T F + ++ Q + GV RK F G+P R GYE+ + + + +G +TSG SPSL
Sbjct: 268 TKDFVNSEALKKQKEEGVKRKLVAFKMVDKGIP-RHGYELLDTDGKNIGKVTSGSMSPSL 326
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFV 114
I +GY+ SK G E+ V+VR+K++ +V K+PF+
Sbjct: 327 NIGIGLGYVTKELSKPGNEIMVQVRNKQLKAEVIKLPFI 365
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA-GYTGEDGVEIS 525
++ ++A+QGP ++ LQ TD+ L + F T T AG+P + A GYTG GVE+
Sbjct: 145 DQTSMLAIQGPKATQALQSLTDVKLDDMKFYTFEKATFAGVPDVIISATGYTGLGGVELY 204
Query: 526 VPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
VP E I + D ++ GLGARD+L
Sbjct: 205 VPNEHAETIWNKIFEAGKDYHIQAIGLGARDTL 237
>gi|453050706|gb|EME98236.1| glycine cleavage system aminomethyltransferase T [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 383
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 132/243 (54%), Gaps = 11/243 (4%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S +A +RT L LH + G M FAG+ MP++YG S H+ R++ +FD+SHM +
Sbjct: 10 SETAAPRRTALDALHRALGATMTDFAGWDMPLRYG--SERDEHVAVRTRAGLFDLSHMGE 67
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+TG + L+ V ++ L PG+ ++ +E+GGI DDLIV + +++ +V+NA
Sbjct: 68 ITLTGPQAGQALDHALVGNLSALKPGRARYTMICDERGGILDDLIVYRLADETYMVVANA 127
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
S +V +D + F++ +D E L+AVQGP S IL+ TD DL L
Sbjct: 128 SNAQVVLDALTERAAGFETEVRD------DRENYALLAVQGPASPAILKSVTDADLDGLK 181
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGAR 427
+ P T+AG+P + R GYTGEDG E+ V + +AL +D + GL R
Sbjct: 182 YYAGLPGTVAGVPALIARTGYTGEDGFELFVAPADAEKLWQALTEAGADAGLVPCGLSCR 241
Query: 428 DSL 430
D+L
Sbjct: 242 DTL 244
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E L+AVQGP S IL+ TD DL L + P T+AG+P + R GYTGEDG E+ V
Sbjct: 153 ENYALLAVQGPASPAILKSVTDADLDGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFV 212
Query: 527 PGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
+ +AL +D + GL RD+L
Sbjct: 213 APADAEKLWQALTEAGADAGLVPCGLSCRDTL 244
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 37 RKRTGFTSTG--VPIRPGYEIFNANDQRV-GAITSGCPSPSLKKNIAMGYIEPAYSKVGV 93
RK G +TG VP R GY + +A V G +TSG PSP+L K IA+ Y++ A++ G
Sbjct: 299 RKLVGLVATGRRVP-RAGYPVVDAASGAVIGEVTSGAPSPTLGKPIAIAYVDAAHAAPGT 357
Query: 94 E-LWVRVRDKRVDVKVTKMPFVK 115
+ V +R +V +PF K
Sbjct: 358 AGVAVDIRGSHEPYEVVALPFYK 380
>gi|358063605|ref|ZP_09150214.1| glycine cleavage system T protein [Clostridium hathewayi WAL-18680]
gi|356698231|gb|EHI59782.1| glycine cleavage system T protein [Clostridium hathewayi WAL-18680]
Length = 362
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 132/239 (55%), Gaps = 12/239 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E +TPLYD+H ++GGK+VPFAG+ +PVQYG+ + A H+ R +FDVSHM + G
Sbjct: 2 ELKTPLYDIHSTYGGKIVPFAGYLLPVQYGS-GVIAEHMAVRKDCGLFDVSHMGEITCIG 60
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+ L + D + G+ S N+ GG+ DDLIV K +D F+V NAS +
Sbjct: 61 SDALKNLNHLLTNDFTSMKDGQARYSPMCNDGGGVVDDLIVYKIRDDHYFIVVNASNKDK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL-DLSSLYFMTS 374
D M A + ++ +DI +E G IA+QGP + IL + ++ Y+
Sbjct: 121 DYAWM-KAHEFGDAVFEDI------SETVGQIALQGPKAHEILAKLAKAEEIPEKYYSAV 173
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+AG+PC +++ GYTGEDG E+ + + EAL++ +E + GLGARD+L
Sbjct: 174 FDGHVAGVPCIISKTGYTGEDGYELYMAAADAPALWEALMAAGKEEGLIPCGLGARDTL 232
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLD-LSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
E G IA+QGP + IL + + + Y+ +AG+PC +++ GYTGEDG E+
Sbjct: 140 ETVGQIALQGPKAHEILAKLAKAEEIPEKYYSAVFDGHVAGVPCIISKTGYTGEDGYELY 199
Query: 526 VPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
+ + EAL++ +E + GLGARD+L
Sbjct: 200 MAAADAPALWEALMAAGKEEGLIPCGLGARDTL 232
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 35 VSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE 94
++RKR G TG I +E D+ VG TSG P L +AM ++ AY++VG +
Sbjct: 279 LTRKRVGLKVTGRGIIREHENVFVGDKLVGQTTSGTHCPYLGYPVAMALLDIAYTEVGTQ 338
Query: 95 LWVRVRDKRVDVKVTKMPFVK 115
+ VR +RV +V +PF K
Sbjct: 339 VEAEVRGRRVPAEVVALPFYK 359
>gi|386053601|ref|YP_005971159.1| glycine cleavage system T protein [Listeria monocytogenes Finland
1998]
gi|346646252|gb|AEO38877.1| glycine cleavage system T protein [Listeria monocytogenes Finland
1998]
Length = 362
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EA+L+ E V GLGARD+L
Sbjct: 202 PSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++++G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEQIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E + +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGINIGLALIDTAYTELGQEAEIGIRNKKVKAKIVPTPFYK 359
>gi|89069346|ref|ZP_01156705.1| predicted aminomethyltransferase, tetrahydrofolate dependent
[Oceanicola granulosus HTCC2516]
gi|89045113|gb|EAR51184.1| predicted aminomethyltransferase, tetrahydrofolate dependent
[Oceanicola granulosus HTCC2516]
Length = 372
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 135/239 (56%), Gaps = 22/239 (9%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV---- 253
RTPL+ LH+ G +MV FAG+ MP+QY + + HLHTR++ +FDVSHM Q ++
Sbjct: 6 RTPLHALHVELGARMVVFAGYEMPLQY-PMGVMQEHLHTRARAGLFDVSHMGQVILRADS 64
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
T E + V DV L G+ LFT++ GG+ DDL++ D LFLV NA+R+
Sbjct: 65 TAAAAEALETLVPV-DVAGLAEGRQRYGLFTDDSGGLLDDLMLANR-GDHLFLVVNAARK 122
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDL--DLSSLYF 371
D+ + Q G ++H +R L+A+QGP + +L DL + + + F
Sbjct: 123 AHDLAHLRTLQ------GVEVH----EITDRALLALQGPAAEAVL---ADLAPEAADMRF 169
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
M T+ G C ++R+GYTGEDG EISVP ++ + LL+ DV GLGARDSL
Sbjct: 170 MDVATLTLEGAECWVSRSGYTGEDGYEISVPADRAEALARRLLAHGDVAPIGLGARDSL 228
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDL--DLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
+R L+A+QGP + +L DL + + + FM T+ G C ++R+GYTGEDG EIS
Sbjct: 142 DRALLALQGPAAEAVL---ADLAPEAADMRFMDVATLTLEGAECWVSRSGYTGEDGYEIS 198
Query: 526 VPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
VP ++ + LL+ DV GLGARDSL
Sbjct: 199 VPADRAEALARRLLAHGDVAPIGLGARDSL 228
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 14 RRRE---TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNA--NDQRVGAIT 67
RRR+ GGFPGA I ++ G +R+R G G P+R G ++ +D VG IT
Sbjct: 260 RRRDGARAGGFPGAETILRELADGPARRRVGLRPEGRAPMREGVPLYAGADDDTPVGRIT 319
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SG P++ +AMGY+ + G + +R KR+ + VT +PF +N+
Sbjct: 320 SGGFGPTVGGPVAMGYVPAELAAPGTVVHGELRGKRLPLTVTALPFTPANF 370
>gi|404413424|ref|YP_006699011.1| glycine cleavage system T protein [Listeria monocytogenes SLCC7179]
gi|404239123|emb|CBY60524.1| glycine cleavage system T protein [Listeria monocytogenes SLCC7179]
Length = 362
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EA+L+ E V GLGARD+L
Sbjct: 202 PSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++++G
Sbjct: 253 LNFAVKLKKEAD-FIGKKALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEQIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E + +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGINIGLALIDTAYTELGQEAEIGIRNKKVKAKIVPTPFYK 359
>gi|222086091|ref|YP_002544623.1| glycine cleavage system aminomethyltransferase T [Agrobacterium
radiobacter K84]
gi|221723539|gb|ACM26695.1| glycine cleavage system T protein [Agrobacterium radiobacter K84]
Length = 356
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 131/224 (58%), Gaps = 17/224 (7%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV---TGKHREEWL--ESIC 266
MVPFAG+ MPVQY A + HL TR+ +FDVSHM Q + +G + + L ES+
Sbjct: 1 MVPFAGYDMPVQYPA-GVMKEHLWTRASAGLFDVSHMGQVTIRARSGTYEDAALALESLV 59
Query: 267 VADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDR 326
D+ L G+ FT++ GGI DDL++T ++D LF+V NAS ++ D+ + QD
Sbjct: 60 PIDILGLAEGRQRYGFFTDDNGGILDDLMITH-MDDYLFVVVNASCKEADLKHL---QDH 115
Query: 327 FKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 386
+G + L +R LIA+QGP + +L DL+ + FM R C + + C +
Sbjct: 116 ---IGDTCEVTLL---DRALIALQGPRAVAVLAELW-ADLAYMKFMDVRHCRLHDVSCLV 168
Query: 387 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+R+GY+GEDG EISVP ++ I + LL DV+ GLGARDSL
Sbjct: 169 SRSGYSGEDGFEISVPADKAEDIAKRLLEHPDVQPIGLGARDSL 212
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R LIA+QGP + +L DL+ + FM R C + + C ++R+GY+GEDG EISVP
Sbjct: 126 DRALIALQGPRAVAVLAELW-ADLAYMKFMDVRHCRLHDVSCLVSRSGYSGEDGFEISVP 184
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ I + LL DV+ GLGARDSL
Sbjct: 185 ADKAEDIAKRLLEHPDVQPIGLGARDSL 212
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFN--ANDQRVGAITSGCPSPS 74
GGFPG++ I +++ +G SR+R G G P+R +++ +G +TSG PS
Sbjct: 251 AGGFPGSTRILAELDNGASRRRVGLKPEGKAPVRGHAKLYADAGGKTEIGEVTSGGFGPS 310
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
++ +AMGY+ +++ G ++ VR K + V V +PF+ Y
Sbjct: 311 VESPVAMGYVPVSFAAPGTPIFAEVRGKYLPVTVAALPFITPTY 354
>gi|256751104|ref|ZP_05491986.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|256750010|gb|EEU63032.1| glycine cleavage system T protein [Thermoanaerobacter ethanolicus
CCSD1]
Length = 368
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 134/238 (56%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+DL+ + GK++ FAG+++PVQ+ SI + H R+ +FDVSHM + V G+
Sbjct: 5 KKTPLFDLYKKYNGKIIDFAGWALPVQFE--SIISEHEAVRNAAGLFDVSHMGEITVKGR 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+++ D+ +L + + N GG+ DDL+V K ++ LV NA+ + D
Sbjct: 63 EAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDDLLVYKYSDEHFLLVVNAANIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + ++ +I ++E +AVQGP + ILQ+ T DLS + +F
Sbjct: 123 YKWMKDNKGVYEVEINNI------SDEISELAVQGPKAEEILQKLTYTDLSEIKFFYFKD 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
IAGI C ++R GYTGEDG EI +P + + E ++ + +K AGLGARD+L
Sbjct: 177 NVKIAGIECLVSRTGYTGEDGFEIYIPNKYAIELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+AVQGP + ILQ+ T DLS + +F IAGI C ++R GYTGEDG EI +P +
Sbjct: 147 LAVQGPKAEEILQKLTYTDLSEIKFFYFKDNVKIAGIECLVSRTGYTGEDGFEIYIPNKY 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E ++ + +K AGLGARD+L
Sbjct: 207 AIELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
+ + G F G + Q + G+ RK GF G+P R GYE+ A++Q++G +T+G S
Sbjct: 263 KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIP-RHGYEV-RADNQKIGYVTTGYFS 320
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
P+LKKNI + I+ Y+++G ++ + +R+K
Sbjct: 321 PTLKKNIGLALIDSKYAQLGNQIEIVIRNK 350
>gi|226227905|ref|YP_002762011.1| aminomethyltransferase [Gemmatimonas aurantiaca T-27]
gi|226091096|dbj|BAH39541.1| aminomethyltransferase [Gemmatimonas aurantiaca T-27]
Length = 374
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 128/241 (53%), Gaps = 8/241 (3%)
Query: 190 GSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
G+ SA +RTPL+D+H++ G K+VPFAG+ MPVQY A IT H R +FDVSHM
Sbjct: 7 GAQGSALKRTPLHDVHVALGAKIVPFAGYEMPVQYPA-GITVEHKAVRESCGMFDVSHMG 65
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
+ +V G ++ S+ DV L G+ S G I DDL+V + D L LV N
Sbjct: 66 EVIVRGPDAIRFVSSVTSNDVAALGIGQVQYSTLLRADGTIVDDLLVYR-FADHLMLVIN 124
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
AS R D+ + A F +DI ++ L+AVQGP + I+ D+ L +
Sbjct: 125 ASNRDKDLAHLQAHLAGFDCTMEDI------SDATALLAVQGPQAPAIVAALADVPLDGV 178
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
+ +AG+PC ++R GYTGE G E+ T + A+++ V GLGARD+
Sbjct: 179 KYYWFTEGRVAGVPCIISRTGYTGELGFELYFDATHATAVWNAVMAAGAVTPCGLGARDT 238
Query: 430 L 430
L
Sbjct: 239 L 239
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
G D ++ +S + L+AVQGP + I+ D+ L + + +AG+PC ++R G
Sbjct: 141 GFDCTMEDIS-DATALLAVQGPQAPAIVAALADVPLDGVKYYWFTEGRVAGVPCIISRTG 199
Query: 516 YTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
YTGE G E+ T + A+++ V GLGARD+L
Sbjct: 200 YTGELGFELYFDATHATAVWNAVMAAGAVTPCGLGARDTL 239
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G ++ Q + G RK GFT +P R GY + G + SG SP+L
Sbjct: 275 FLGKDVLVRQHQDGTDRKLVGFTFEERAIP-RHGYPVVYGG-VAFGEVRSGTMSPTLGIP 332
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ Y+ A + G V +R KRV +V K+PF K
Sbjct: 333 VGTCYLPSAAAVEGTRFDVDIRGKRVPARVVKLPFYK 369
>gi|320582443|gb|EFW96660.1| putative nuclear cohesin complex SMC ATPase [Ogataea parapolymorpha
DL-1]
Length = 1518
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 122/224 (54%), Gaps = 9/224 (4%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MV FAG+SMPV Y + SH R+ VFDVSHMLQ + G + +L+ +C D+
Sbjct: 1 MVDFAGYSMPVLYKGQTHIESHKWVRANCGVFDVSHMLQHRIKGPNTTSFLQKLCPTDLR 60
Query: 272 ELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLG 331
L P TLS+ N GG+ DD ++TK EDS ++V+NA R D++ + + +
Sbjct: 61 SLKPFHSTLSVLLNNNGGVIDDCMITKHDEDSFYIVTNAGCRAKDIEFIKSELSNYNEGS 120
Query: 332 KDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT----LT 387
H F E GL+A+QGP + ++ + T DLS+LYF SR + G + +
Sbjct: 121 GIEHNTF----EGGLLAIQGPKAQEVVSKFTSSDLSTLYFGQSRFIPLDGFGSSEKFHIA 176
Query: 388 RAGYTGEDGVEISVPGEQCTH-IVEALLSDEDVKLAGLGARDSL 430
R GYTGEDG EIS+P ALL + VK GL ARDSL
Sbjct: 177 RGGYTGEDGFEISIPEIGVARDFFLALLQSDVVKPIGLAARDSL 220
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT----LTRAGYTGEDGVE 523
E GL+A+QGP + ++ + T DLS+LYF SR + G + + R GYTGEDG E
Sbjct: 128 EGGLLAIQGPKAQEVVSKFTSSDLSTLYFGQSRFIPLDGFGSSEKFHIARGGYTGEDGFE 187
Query: 524 ISVPGEQCTH-IVEALLSDEDVKLAGLGARDSL 555
IS+P ALL + VK GL ARDSL
Sbjct: 188 ISIPEIGVARDFFLALLQSDVVKPIGLAARDSL 220
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 14 RRRETGGFPGASIIQSQIKS--GVSRKRTGFTSTGVPIRPGYEIFNANDQ--RVGAITSG 69
+ R + F G+ I SQ+++ VS KR G S G R G +IF +++Q ++G + SG
Sbjct: 250 KSRRSDSFNGSEKILSQLENPKSVSFKRVGIKSKGPSPRQGNKIFASDNQSKQIGVVCSG 309
Query: 70 CPSPSLKKNI 79
PSP+L N+
Sbjct: 310 SPSPTLGGNV 319
>gi|347819572|ref|ZP_08873006.1| glycine cleavage system T protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 379
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 134/267 (50%), Gaps = 19/267 (7%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH+ G +M+PFAG+ +PVQY A + A H HTR +FDVSHM Q + G
Sbjct: 4 TPLDALHVELGARMLPFAGYRLPVQYPA-GLLAEHRHTRQAAGLFDVSHMGQLRLVGADA 62
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ DV L G+ L N+ GGI DDL+ + +F++ N + + D+
Sbjct: 63 AAALESLMPMDVIGLPVGQQRYGLLLNDAGGIIDDLMFCNQGPEGIFVIVNGACKAGDVA 122
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ Q R + + L+A+QGP ++T L R + L FM +
Sbjct: 123 HI---QARIGA-----RCALIPLPGHALLALQGPQAATALARLAP-GVEGLPFMRGAKHS 173
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL-------- 430
IAG C LTR+GYTGEDG EIS+P Q + ALL+ +V GLGAR+SL
Sbjct: 174 IAGCDCFLTRSGYTGEDGFEISLPAAQAETLARALLAQPEVLPIGLGARNSLRLEAGLCL 233
Query: 431 -SGDITLNTPVPHGSLKLSNDRFKSLG 456
DI T P +L + + + G
Sbjct: 234 YGNDIDAGTTPPEAALGWAIPKLRRTG 260
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 17 ETGGFPGASIIQSQIKSGVS--RKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSP 73
GGFPGA + +QI S R+R G + VP+R E+ + + Q++GA+TSG P
Sbjct: 263 RAGGFPGADRVLAQIDDPASLPRQRVGLRALERVPVREHSELQSTDGQKIGAVTSGLLGP 322
Query: 74 SLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
++ +AMGY+ PA + VG + VR K V ++V +PFV +NY+ P
Sbjct: 323 TVDAPVAMGYVPPALATVGTRVNAIVRGKAVPMQVHALPFVPANYFRVP 371
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
L+A+QGP ++T L R + L FM +IAG C LTR+GYTGEDG EIS+P Q
Sbjct: 142 LLALQGPQAATALARLAP-GVEGLPFMRGAKHSIAGCDCFLTRSGYTGEDGFEISLPAAQ 200
Query: 531 CTHIVEALLSDEDVKLAGLGARDSL 555
+ ALL+ +V GLGAR+SL
Sbjct: 201 AETLARALLAQPEVLPIGLGARNSL 225
>gi|145543448|ref|XP_001457410.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425226|emb|CAK90013.1| unnamed protein product [Paramecium tetraurelia]
Length = 395
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 127/233 (54%), Gaps = 11/233 (4%)
Query: 201 LYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREE 260
L+D H++ KMVPFAG+ MPVQY + HL+ R +FDVSHM Q V G+ R +
Sbjct: 26 LHDYHVNLKAKMVPFAGYEMPVQY-PQGVLKEHLYCRESCGLFDVSHMGQVKVFGEDRMK 84
Query: 261 WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLM 320
++E++ D G+ L L NE+ GI DD IV K +D + +V NA + +DM M
Sbjct: 85 FVETLTTGDFQTKKSGQSVLCLILNEKAGIIDDTIVAKR-DDHIHIVVNAGNKFIDMKQM 143
Query: 321 VAAQDR-FKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPC 377
D+ K + ++L +++ LIAVQGP + +L T+ +L + FM
Sbjct: 144 ----DKIIKDYNYKVQYEYL--KDKPLIAVQGPNAHKVLNEVFGTEYNLDKIPFMFMVNI 197
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
GI + R GYTGEDG EISV + + + LL+ + + GLGARDSL
Sbjct: 198 KKNGIDYQINRCGYTGEDGYEISVESSKAQELCDQLLATKMAQFCGLGARDSL 250
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 461 LQFLSPEERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTG 518
+Q+ +++ LIAVQGP + +L T+ +L + FM GI + R GYTG
Sbjct: 154 VQYEYLKDKPLIAVQGPNAHKVLNEVFGTEYNLDKIPFMFMVNIKKNGIDYQINRCGYTG 213
Query: 519 EDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EDG EISV + + + LL+ + + GLGARDSL
Sbjct: 214 EDGYEISVESSKAQELCDQLLATKMAQFCGLGARDSL 250
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 14 RRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSP 73
+ E+ F G + Q + KR GF + RP +I Q+VG++TSG SP
Sbjct: 287 KYNESAAFIGRDAL-PQRQKDAKFKRMGFITQSGIARPPCDI-EFQGQKVGSVTSGTYSP 344
Query: 74 SLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPK 123
+LKK + +I Y+K G +L +R +V++ ++ PFV YY P K
Sbjct: 345 NLKKGLGFAFINNEYAKDGTQLQADIRGSKVNITLSPTPFVPQRYYKPEK 394
>gi|410584364|ref|ZP_11321467.1| glycine cleavage system T protein [Thermaerobacter subterraneus DSM
13965]
gi|410504299|gb|EKP93810.1| glycine cleavage system T protein [Thermaerobacter subterraneus DSM
13965]
Length = 372
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 130/239 (54%), Gaps = 18/239 (7%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+ G +MVPFAG++MP+QY I H R +FDVSHM + ++G
Sbjct: 12 RRTPLYDEHLALGARMVPFAGWAMPLQY--TGIMEEHRAVRQAAGLFDVSHMGEIEISGP 69
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ L+ + DV L PG+ ++ +GGI DDL+V + E LV NA+ D
Sbjct: 70 GARQALQRLVTNDVERLAPGRALYTVMCTPEGGIVDDLLVYQVAEQRYMLVVNAANTASD 129
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD-LDLSSLYFMTSR 375
+D + R G ++ + S E LIA+QGP + IL R TD +DL SL R
Sbjct: 130 LDWV-----REHVAGPEVTVADRSLET-ALIALQGPRAQAILARVTDGIDLESL-----R 178
Query: 376 PCT-IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
P + G ++R GYTGEDG EI + E I +L+ DE + AGLGARD+L
Sbjct: 179 PFHFVGGWEGMISRTGYTGEDGFEIFLSWEGAPAIWRGILAAGQDEGLVPAGLGARDTL 237
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 468 ERGLIAVQGPLSSTILQRHTD-LDLSSLYFMTSRPCT-IAGIPCTLTRAGYTGEDGVEIS 525
E LIA+QGP + IL R TD +DL SL RP + G ++R GYTGEDG EI
Sbjct: 150 ETALIALQGPRAQAILARVTDGIDLESL-----RPFHFVGGWEGMISRTGYTGEDGFEIF 204
Query: 526 VPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
+ E I +L+ DE + AGLGARD+L
Sbjct: 205 LSWEGAPAIWRGILAAGQDEGLVPAGLGARDTL 237
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 17 ETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPS 74
+ G F G + Q + G+ +K G GV R GY + + + VG +TSG +P+
Sbjct: 268 DKGPFIGREALLRQREQGLRKKLVGLRLLEPGV-ARTGYPVLDDEGREVGRVTSGTVAPT 326
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
L ++A+ Y+ P+ + G L V +R + V +V + PF +
Sbjct: 327 LGASLALAYVPPSLAVPGRRLAVGIRGRAVAAQVVETPFYR 367
>gi|410079645|ref|XP_003957403.1| hypothetical protein KAFR_0E01140 [Kazachstania africana CBS 2517]
gi|372463989|emb|CCF58268.1| hypothetical protein KAFR_0E01140 [Kazachstania africana CBS 2517]
Length = 397
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 135/241 (56%), Gaps = 8/241 (3%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAV-SITASHLHTRSKVSVFDVSHMLQTV 252
+A ++T LYDLH+ K+VPFAG+ MP+ Y + + SHL TR +FDVSHMLQ+
Sbjct: 13 AAVKKTALYDLHVDLEAKLVPFAGYEMPLLYPNIQNHVQSHLWTRKHAGLFDVSHMLQSR 72
Query: 253 VTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
+ G L + + +L G G LS+ N+QGGI DDLI+ + + +VSNASR
Sbjct: 73 LMGTDAIALLNLVTPSKFSKLQEGSGQLSVLLNDQGGIIDDLIIVRE-RNGFAIVSNASR 131
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
R ++ ++ Q R + G +I + E + LIA+QGP +S +L+ + DL+ L+F
Sbjct: 132 RD-EVSRFISQQIRDRLPGCNIVWE--PIENKSLIALQGPTASRVLKEFVEGDLNKLFFG 188
Query: 373 TSRPCTI---AGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
+ + + I + R GYTGEDG EI++ LL++E VK GL RDS
Sbjct: 189 QRQVFPLKDHSDININVMRGGYTGEDGFEIAINESVSPDFASDLLANEQVKPIGLAGRDS 248
Query: 430 L 430
L
Sbjct: 249 L 249
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTI---AGIPCTLTRAGYTGEDGVE 523
E + LIA+QGP +S +L+ + DL+ L+F + + + I + R GYTGEDG E
Sbjct: 158 ENKSLIALQGPTASRVLKEFVEGDLNKLFFGQRQVFPLKDHSDININVMRGGYTGEDGFE 217
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
I++ LL++E VK GL RDSL
Sbjct: 218 IAINESVSPDFASDLLANEQVKPIGLAGRDSL 249
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 21 FPGASIIQSQIKSGVSRK-RTGFTSTG----VPIRPGYEIFNAND--QRVGAITSGCPSP 73
F G I Q+K+ + R GF +G R G IFN ND +G +TSG SP
Sbjct: 291 FNGYDKIIDQLKNKTNEWVRVGFKFSGDTPSPAARHGATIFN-NDGITEIGQVTSGSVSP 349
Query: 74 SLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
L NI Y++ K+G + V+VR K +++T+MPFV ++YY
Sbjct: 350 CLSINIGQAYVKNGEHKIGTKHLVQVRKKLFPIEITRMPFVPTHYY 395
>gi|349592197|gb|AEP95750.1| glycine decarboxylase complex subunit T [Cicer arietinum]
Length = 177
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 228 SITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQ 287
SI S L+ R S+FDVSHM + GK +LE + +ADV L PG GTL++FTNE+
Sbjct: 5 SIMDSTLNCRQNGSLFDVSHMCGLSLKGKDAVTFLEKLVIADVAALAPGTGTLTVFTNEK 64
Query: 288 GGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLI 347
GG DD ++TK +D ++LV NA R D+ + FK+ G D+ +ER LI
Sbjct: 65 GGAIDDSVITKVTDDHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLI 122
Query: 348 AVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 402
A+QGPL++ +LQ T DLS LYF R I G C LTR GYTGEDG EISVP
Sbjct: 123 ALQGPLAAPVLQHLTKDDLSKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVP 177
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER LIA+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 104 FKAKGGDVSWHI--HDERSLIALQGPLAAPVLQHLTKDDLSKLYFGEFRVLDINGSQCFL 161
Query: 512 TRAGYTGEDGVEISVP 527
TR GYTGEDG EISVP
Sbjct: 162 TRTGYTGEDGFEISVP 177
>gi|92113938|ref|YP_573866.1| glycine cleavage system T protein [Chromohalobacter salexigens DSM
3043]
gi|91797028|gb|ABE59167.1| glycine cleavage system T protein [Chromohalobacter salexigens DSM
3043]
Length = 379
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 131/234 (55%), Gaps = 12/234 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+TPL+DLHLS G KMVPFAG+SMPVQY A+ + H HTR+ +FDVSHM Q +++G
Sbjct: 14 HQTPLHDLHLSLGAKMVPFAGYSMPVQY-ALGVKKEHEHTRNACGLFDVSHMGQLLISGP 72
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ +E++ AD+ +L G +LFT +GGI DDL++ +D L++V NA+ + D
Sbjct: 73 TPAQAIETLVPADIVDLPAGMQRYALFTGNEGGILDDLMIVNRGDD-LYVVVNAACKDQD 131
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + D + +R L+A+QGP + ++ R L FM
Sbjct: 132 VTHLRTGLDAAHQ---------VEVLDRSLLALQGPQAKDVMARLCPA-ACDLVFMRHGQ 181
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISV + + L+ +V+ GLGARDSL
Sbjct: 182 FDALGTTLWISRSGYTGEDGFEISVSRDAAETLARWLVEQPEVEPIGLGARDSL 235
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 5 SRLLIFPGKRRR----ETGGFPGASIIQSQIKSG-VSRKRTGFTSTG-VPIRPGYEIFNA 58
+ L+ GK RR GGFPGA +I QI + + RKR G G P+R G +++
Sbjct: 257 ASLIWAVGKARRIGGEREGGFPGADVILPQIDTKRIVRKRVGLVGEGRAPVREGTRLYDD 316
Query: 59 NDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
D+ VG +TSG P+L K +AM Y++ ++ V L+ VR KR+ ++VT+MPFV +NY
Sbjct: 317 ADRHVGQVTSGSFGPTLGKPVAMAYVDVEWAGVETTLYADVRGKRLPMRVTRMPFVPANY 376
Query: 119 Y 119
Y
Sbjct: 377 Y 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+A+QGP + ++ R L FM G ++R+GYTGEDG EISV
Sbjct: 149 DRSLLALQGPQAKDVMARLCPA-ACDLVFMRHGQFDALGTTLWISRSGYTGEDGFEISVS 207
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + L+ +V+ GLGARDSL
Sbjct: 208 RDAAETLARWLVEQPEVEPIGLGARDSL 235
>gi|71083370|ref|YP_266089.1| glycine cleavage system protein T2 [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062483|gb|AAZ21486.1| glycine cleavage system protein T2 [Candidatus Pelagibacter ubique
HTCC1062]
Length = 368
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 127/235 (54%), Gaps = 15/235 (6%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T LY LH HG K VPFAG+ MP+QY + I H TR +FDVSHM Q + G
Sbjct: 5 KTALYSLHQKHGAKFVPFAGYQMPIQY-SKGIIEEHKSTRENAGIFDVSHMGQLFIKGDD 63
Query: 258 R-EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + LE I A++ + + S N++ GI DDLI+TK +E +V NA+ + D
Sbjct: 64 KLAKDLEKIFPAELSKAKLNQSKYSFLMNDEAGIYDDLIITK-VEGGFNIVLNAACKNTD 122
Query: 317 MDLMVA-AQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
L+ +D++ + + +EE LIA+QGP + IL++ + +S L FM
Sbjct: 123 FKLLTKLLEDKY---------EMILSEELSLIAIQGPKAVQILEKIIN-GVSDLKFMNGD 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+TR+GYTGEDG EIS+ E V+ L+ DE L GLGARD+L
Sbjct: 173 TFNYLKEDIYITRSGYTGEDGFEISIKNENAEVFVQKLI-DEGANLIGLGARDTL 226
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCP 71
K R GGF G I+SQI+ GVS+ R G G I R IF+ +D+ +G ITSG
Sbjct: 256 KNRILEGGFIGCEKIKSQIEKGVSKIRVGIKPEGRIIAREKTSIFSEDDKNIGEITSGTF 315
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
PS++ +AMGY+E ++SK+ ++++ VR K+ ++ +PF K +Y
Sbjct: 316 GPSVQAPVAMGYVENSFSKIDTKVFLEVRGKKYPAIISNLPFYKKSY 362
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 433 DITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLS 492
+I LN + KL L +D + LS EE LIA+QGP + IL++ + +S
Sbjct: 111 NIVLNAACKNTDFKL----LTKLLEDKYEMILS-EELSLIAIQGPKAVQILEKIIN-GVS 164
Query: 493 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 552
L FM +TR+GYTGEDG EIS+ E V+ L+ DE L GLGAR
Sbjct: 165 DLKFMNGDTFNYLKEDIYITRSGYTGEDGFEISIKNENAEVFVQKLI-DEGANLIGLGAR 223
Query: 553 DSL 555
D+L
Sbjct: 224 DTL 226
>gi|47095931|ref|ZP_00233534.1| glycine cleavage system T protein [Listeria monocytogenes str. 1/2a
F6854]
gi|254912022|ref|ZP_05262034.1| glycine cleavage system T protein [Listeria monocytogenes J2818]
gi|254936349|ref|ZP_05268046.1| glycine cleavage system T protein [Listeria monocytogenes F6900]
gi|386047000|ref|YP_005965332.1| glycine cleavage system T protein [Listeria monocytogenes J0161]
gi|47015677|gb|EAL06607.1| glycine cleavage system T protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258608940|gb|EEW21548.1| glycine cleavage system T protein [Listeria monocytogenes F6900]
gi|293589988|gb|EFF98322.1| glycine cleavage system T protein [Listeria monocytogenes J2818]
gi|345533991|gb|AEO03432.1| glycine cleavage system T protein [Listeria monocytogenes J0161]
gi|441471022|emb|CCQ20777.1| Aminomethyltransferase [Listeria monocytogenes]
gi|441474149|emb|CCQ23903.1| Aminomethyltransferase [Listeria monocytogenes N53-1]
Length = 362
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSEMEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EA+L+ E V GLGARD+L
Sbjct: 202 PSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++++G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEQIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGINIGLALIDTAYTELGQEVEVGIRNKKVKAKIVPTPFYK 359
>gi|388568563|ref|ZP_10154978.1| glycine cleavage system T protein [Hydrogenophaga sp. PBC]
gi|388264174|gb|EIK89749.1| glycine cleavage system T protein [Hydrogenophaga sp. PBC]
Length = 385
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 131/238 (55%), Gaps = 14/238 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGA--VSITASHLHTRSKVSVFDVSHMLQTVVTG 255
+TPL+ LHL G +MVPFAG+SMPVQY + + A HLHTRS +FDVSHM Q + G
Sbjct: 12 QTPLHALHLELGARMVPFAGYSMPVQYQGPGMGLMAEHLHTRSAAGLFDVSHMGQLRLIG 71
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLI-VTKTLEDS--LFLVSNASR 312
ES+ DV L PGK L ++G + DDL+ V + + + LF++ N +
Sbjct: 72 PDAAAAFESLMPVDVIGLAPGKQRYGLLLTDEGMVIDDLMFVNRDVANGGDLFVIVNGAC 131
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D+ +V DR + + QF +RGL+A+QGP + LQR + L FM
Sbjct: 132 KHGDLKHIV---DRIGAR-CTVEPQF----DRGLLALQGPQAVAALQRLVP-GVEKLVFM 182
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T + P +TR+GYTGEDG EIS+ ALL +VK GLGAR+SL
Sbjct: 183 TGGAFSWQDKPLFVTRSGYTGEDGFEISLAAADTEAFARALLQQPEVKPVGLGARNSL 240
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIKSG--VSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +Q+ V R R G + VP+R E+ + +R+G +TSG PS
Sbjct: 279 AGGFPGADRVLAQLDGSLPVQRVRVGLIAQERVPVREHTELHSEAGERLGEVTSGLLGPS 338
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ + IAMGY+ PA++ VG L VR K V ++V+ +PFV + Y+
Sbjct: 339 INQPIAMGYVPPAFAAVGTRLNAMVRGKAVPMQVSALPFVPNRYH 383
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 402 PGEQCTHIVEALLSDEDVKLAGLG--ARDSLSGD---ITLNTPVPHGSLKLSNDRFKSLG 456
PG+Q + LL+DE + + L RD +G + +N HG LK DR +
Sbjct: 91 PGKQRYGL---LLTDEGMVIDDLMFVNRDVANGGDLFVIVNGACKHGDLKHIVDRIGAR- 146
Query: 457 KDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGY 516
+ QF +RGL+A+QGP + LQR + L FMT + P +TR+GY
Sbjct: 147 CTVEPQF----DRGLLALQGPQAVAALQRLVP-GVEKLVFMTGGAFSWQDKPLFVTRSGY 201
Query: 517 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TGEDG EIS+ ALL +VK GLGAR+SL
Sbjct: 202 TGEDGFEISLAAADTEAFARALLQQPEVKPVGLGARNSL 240
>gi|167038372|ref|YP_001665950.1| glycine cleavage system aminomethyltransferase T
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116776|ref|YP_004186935.1| glycine cleavage system T protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|238687722|sp|B0KD95.1|GCST_THEP3 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|166857206|gb|ABY95614.1| glycine cleavage system T protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929867|gb|ADV80552.1| glycine cleavage system T protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 368
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 134/238 (56%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+DL+ + GK++ FAG+++PVQ+ SI + H R+ +FDVSHM + V G+
Sbjct: 5 KKTPLFDLYKKYNGKIIDFAGWALPVQFE--SIISEHEAVRNAAGLFDVSHMGEITVKGR 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+++ D+ +L + + N GG+ DDL+V K ++ LV NA+ + D
Sbjct: 63 EAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDDLLVYKYSDEHFLLVVNAANIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + ++ +I ++E +AVQGP + ILQ+ T DLS + +F
Sbjct: 123 YKWMKDNKGVYEVEINNI------SDEISELAVQGPKAEEILQKLTYTDLSEIKFFYFKD 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
IAGI C ++R GYTGEDG EI +P + + E ++ + +K AGLGARD+L
Sbjct: 177 NVKIAGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+AVQGP + ILQ+ T DLS + +F IAGI C ++R GYTGEDG EI +P +
Sbjct: 147 LAVQGPKAEEILQKLTYTDLSEIKFFYFKDNVKIAGIECLVSRTGYTGEDGFEIYMPNKY 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E ++ + +K AGLGARD+L
Sbjct: 207 AVELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
+ + G F G + Q + G+ RK GF G+P R GYE+ A++Q++G +T+G S
Sbjct: 263 KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIP-RHGYEV-RADNQKIGYVTTGYFS 320
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
P+LKKNI + I+ Y+++G ++ + +R+K
Sbjct: 321 PTLKKNIGLALIDSKYAQLGNQIEIVIRNK 350
>gi|332557630|ref|ZP_08411952.1| glycine cleavage system aminomethyltransferase T [Rhodobacter
sphaeroides WS8N]
gi|332275342|gb|EGJ20657.1| glycine cleavage system aminomethyltransferase T [Rhodobacter
sphaeroides WS8N]
Length = 377
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 132/238 (55%), Gaps = 15/238 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R PL+DLH+ GG+MVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q ++ +
Sbjct: 9 RRLPLHDLHVRLGGRMVPFAGWEMPVQYPA-GVMKEHLHTRTAAGLFDVSHMGQLLLRPR 67
Query: 257 HREEWL----ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
L E + DV L G+ + TNE GGI+DDL+ D L +V NA+
Sbjct: 68 GGLAALGAAFERLMPVDVLGLAEGRQRYGILTNETGGIRDDLMFANR-GDHLHVVVNAAC 126
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
D + AA LG + ++ ++RGL+A+QGP + +L +++ FM
Sbjct: 127 VAEDTAHLRAA------LGDAA--EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFM 177
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP E EALL+ E+V GLGARDSL
Sbjct: 178 DVIAADWQGADLWISRSGYTGEDGFEISVPVEAIAAFAEALLAREEVAPIGLGARDSL 235
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
+ ++ ++RGL+A+QGP + +L +++ FM G ++R+GYTGEDG
Sbjct: 143 EVVTVDDRGLLALQGPAAEAVLASLVPA-AAAMRFMDVIAADWQGADLWISRSGYTGEDG 201
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP E EALL+ E+V GLGARDSL
Sbjct: 202 FEISVPVEAIAAFAEALLAREEVAPIGLGARDSL 235
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 27 IQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIE 85
I +++G R R G + +G P+R G E+F + VG +TSG PS++ IAMGY+
Sbjct: 283 ILGDLEAGPERLRVGLSPSGRAPMREGTELFTPDGTPVGRVTSGGFGPSVEAPIAMGYVA 342
Query: 86 PAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+++ G L VR KR+ V V +PF S Y
Sbjct: 343 TSHAASGTALVGEVRGKRLPVTVVDLPFRPSTY 375
>gi|289577512|ref|YP_003476139.1| glycine cleavage system protein T [Thermoanaerobacter italicus Ab9]
gi|289527225|gb|ADD01577.1| glycine cleavage system T protein [Thermoanaerobacter italicus Ab9]
Length = 374
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 134/238 (56%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+DL+ + GK++ FAG+++PVQ+ SI + H R+ +FDVSHM + +V G+
Sbjct: 5 KKTPLFDLYKKYNGKIIDFAGWALPVQFE--SIISEHEAVRNAAGLFDVSHMGEIIVKGR 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+++ D+ +L + + N GG+ DDL+V K ++ LV NA+ + D
Sbjct: 63 EAFAFLQNLITNDLSKLKENQVLYTFMCNYNGGVVDDLLVYKYSDEHFLLVVNAANIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + + +I ++E +A+QGP + +LQ+ TD DLS + +F
Sbjct: 123 YKWMKDNKGVYAVEINNI------SDEISELAIQGPKAEEVLQKLTDTDLSQIKFFYFKD 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
IAGI ++R GYTGEDG EI +P + + E ++ + +K AGLGARD+L
Sbjct: 177 NVKIAGINSLISRTGYTGEDGFEIYIPNKYAIELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + +LQ+ TD DLS + +F IAGI ++R GYTGEDG EI +P +
Sbjct: 147 LAIQGPKAEEVLQKLTDTDLSQIKFFYFKDNVKIAGINSLISRTGYTGEDGFEIYIPNKY 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E ++ + +K AGLGARD+L
Sbjct: 207 AIELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
+ + G F G + Q + GV RK GF G+P R GYE+ A++Q++G +T+G S
Sbjct: 263 KFDKGNFIGKDALLKQKEEGVKRKIVGFEMIDNGIP-RHGYEV-RADNQKIGYVTTGYFS 320
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P+LKKNI + I+ Y+++G ++ + +R+K + + F K NY
Sbjct: 321 PTLKKNIGLALIDSKYAQLGNQIEIVIRNKPLKASIISKNFYKKNY 366
>gi|315303009|ref|ZP_07873723.1| glycine cleavage system T protein [Listeria ivanovii FSL F6-596]
gi|313628616|gb|EFR97035.1| glycine cleavage system T protein [Listeria ivanovii FSL F6-596]
Length = 362
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 136/234 (58%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+K +FDVSHM + +V G
Sbjct: 6 KTPIHPLYEKYGAKTIDFGGWDLPVQFSG--IKAEHEAVRTKAGLFDVSHMGEIIVEGAE 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V + E LV NA+ + D
Sbjct: 64 STAYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYRLSETKYLLVVNAANTEKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
D +V K++ D+ + +S+ + G +A+QGP + IL + T++DL+++ +F
Sbjct: 124 DWIV------KNVRGDVTVSDVSS-KYGQLALQGPDAEKILAKLTNIDLNAISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
IAG+ ++R+GYTGEDG EI +P + T + EA+++ E V GLGARD+L
Sbjct: 177 AEIAGVKTIISRSGYTGEDGFEIYMPSDDATKVFEAIMA-EKVLPIGLGARDTL 229
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 470 GLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
G +A+QGP + IL + T++DL+++ +F IAG+ ++R+GYTGEDG EI +P
Sbjct: 144 GQLALQGPDAEKILAKLTNIDLNAISFFGFVEDAEIAGVKTIISRSGYTGEDGFEIYMPS 203
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
+ T + EA+++ E V GLGARD+L
Sbjct: 204 DDATKVFEAIMA-EKVLPIGLGARDTL 229
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F + +++G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLTRKLVGIELIERGIP-RHDYPVF-LDGKQIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ A++++G E+ + +R+K+V KV PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDIAHTELGQEIEIGIRNKKVKAKVVATPFYK 359
>gi|217076311|ref|YP_002334027.1| glycine cleavage system aminomethyltransferase T [Thermosipho
africanus TCF52B]
gi|217036164|gb|ACJ74686.1| glycine cleavage system T protein [Thermosipho africanus TCF52B]
Length = 436
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 130/241 (53%), Gaps = 10/241 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPLY+ H+ G KMV FAGF MP+QY I + R V +FDVSHM Q +V GK
Sbjct: 75 KYTPLYEQHVKLGAKMVEFAGFQMPIQY--TGIKDEVIAVRKDVGMFDVSHMGQVLVEGK 132
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++ + D L G+ + NE GG DDL+ K ++ FLV NA+ + D
Sbjct: 133 DSTNFVNYLITNDFKNLSNGEIVYTAMCNENGGFIDDLLAYKISDEKAFLVINAANIEKD 192
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M +L D+ L+ S ++ LIA+QGP + LQ+ TD+DL S+ + T
Sbjct: 193 FEWMKNV-----ALNFDVKLENKS-DDYALIAIQGPNAQKTLQKLTDIDLESIGYYTFVF 246
Query: 377 CTIAGIPCTLTRAGYTGEDGVEI-SVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
+ + ++R GYTGEDG EI + + I E LL + VK AGLGARD+L + +
Sbjct: 247 GKVKDVEALISRTGYTGEDGFEIYTTDKDGIVKIWEELL-NLGVKPAGLGARDTLRLEAS 305
Query: 436 L 436
L
Sbjct: 306 L 306
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+L D+ L+ S ++ LIA+QGP + LQ+ TD+DL S+ + T + + ++R
Sbjct: 200 ALNFDVKLENKS-DDYALIAIQGPNAQKTLQKLTDIDLESIGYYTFVFGKVKDVEALISR 258
Query: 514 AGYTGEDGVEI-SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG EI + + I E LL + VK AGLGARD+L
Sbjct: 259 TGYTGEDGFEIYTTDKDGIVKIWEELL-NLGVKPAGLGARDTL 300
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + ++ Q++ G+ R+ GF I R GY++F + + +G +TSG SP+L ++I
Sbjct: 334 FVGKAALEKQLEEGLKRRLKGFKLIDKGIARHGYKVFK-DGREIGVVTSGTFSPTLDESI 392
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRKVKKK 130
M IE Y K G + + +R+K V ++ KMPF + + +R KKK
Sbjct: 393 GMALIETGY-KSGDIIEIEIRNKLVKAEIVKMPFYRGS------VRSKKKK 436
>gi|134298588|ref|YP_001112084.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1]
gi|172044257|sp|A4J2F6.1|GCST_DESRM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|134051288|gb|ABO49259.1| glycine cleavage system T protein [Desulfotomaculum reducens MI-1]
Length = 364
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 129/243 (53%), Gaps = 12/243 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY++HL+ G KMV F G+ MPVQY I A H RS +FDVSHM + ++G
Sbjct: 5 KRTPLYNIHLAAGAKMVEFGGWLMPVQYEG--IIAEHQAVRSAAGLFDVSHMGEIQISGP 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + D+ L PG S N QGG DDL+V + + LV NAS D
Sbjct: 63 TAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQYLLVVNASNTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+V+ Q + +Q +S E +A+QGP + ILQR T +DLS +
Sbjct: 123 FHWIVSQQV------PGVEIQNVS-EVTCQLALQGPQAEKILQRLTAVDLSHIKSFCFVY 175
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSLSGD 433
+ GI C ++R GYTGE G E+ P + +A++ + + ++ GLGARD+L +
Sbjct: 176 GAVEGIHCLISRTGYTGEAGFELYFPASHAERVWQAIMATGATDGLRPVGLGARDTLRFE 235
Query: 434 ITL 436
L
Sbjct: 236 ACL 238
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q ++G + + G G+P R GY IF Q VG ITSG +P+L KN
Sbjct: 267 FVGKEPLLKQKEAGTTYQLVGLEMIDRGIP-RQGYAIFK-EGQEVGWITSGTFAPTLGKN 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ +GY+E ++ VG EL + VR+K + ++ K PF K
Sbjct: 325 MGLGYVEIPFADVGKELNIMVRNKPLKARIVKKPFYK 361
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
+A+QGP + ILQR T +DLS + + GI C ++R GYTGE G E+ P
Sbjct: 146 LALQGPQAEKILQRLTAVDLSHIKSFCFVYGAVEGIHCLISRTGYTGEAGFELYFPASHA 205
Query: 532 THIVEALL---SDEDVKLAGLGARDSL 555
+ +A++ + + ++ GLGARD+L
Sbjct: 206 ERVWQAIMATGATDGLRPVGLGARDTL 232
>gi|392394889|ref|YP_006431491.1| glycine cleavage system T protein [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525967|gb|AFM01698.1| glycine cleavage system T protein [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 363
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 131/237 (55%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ H G K++ F G+ MPVQY V H RSK +FDVSHM + + GK
Sbjct: 5 KRTPLYEKHQQLGAKLIDFGGWEMPVQYAGV--LEEHKTVRSKAGLFDVSHMGEVELKGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ I DV + + S GG+ DDL+V + ++ +V NAS D
Sbjct: 63 DSLAFLQYILTNDVSRIQDNQIQYSPMCAPDGGVVDDLLVYRYSQEHFLIVVNASNTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M QD K+ G +IHL+ S E+ +A+QGPL+ ILQ+ T LDLS + +
Sbjct: 123 FAWM---QD--KAQGFEIHLENRS-EDFAQLALQGPLAEKILQKLTRLDLSQIKYYWFTH 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
+ G+ C ++R GYTGEDG E+ +P + + + +L ++E V+ GLGARD+L
Sbjct: 177 GEVDGVLCLISRTGYTGEDGFEVYLPPDHAPRMWDRILAVGAEEGVQPIGLGARDTL 233
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K+ G +IHL+ S E+ +A+QGPL+ ILQ+ T LDLS + + + G+ C ++
Sbjct: 129 KAQGFEIHLENRS-EDFAQLALQGPLAEKILQKLTRLDLSQIKYYWFTHGEVDGVLCLIS 187
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
R GYTGEDG E+ +P + + + +L ++E V+ GLGARD+L
Sbjct: 188 RTGYTGEDGFEVYLPPDHAPRMWDRILAVGAEEGVQPIGLGARDTL 233
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPS 74
R E F G + +Q + G+ RK G I + + +G ITSG SP+
Sbjct: 262 RLEKEHFVGKEALSAQKEKGIPRKLVGLEMIERGIARSHYPLQKVGKEIGFITSGSFSPT 321
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
L KNIA+G I P Y+++G L V +R K V ++ F K
Sbjct: 322 LNKNIALGLIPPEYAQIGETLDVIIRGKAVKARIIPSQFYK 362
>gi|424844572|ref|ZP_18269183.1| glycine cleavage system T protein [Jonquetella anthropi DSM 22815]
gi|363986010|gb|EHM12840.1| glycine cleavage system T protein [Jonquetella anthropi DSM 22815]
Length = 367
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 132/239 (55%), Gaps = 14/239 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTP+YD H++ GG MV F G+ +PVQY + + HL+ RSK +FDVSHM + V GK
Sbjct: 2 RRTPMYDRHVAAGGTMVDFGGWELPVQYEGIKV--EHLNVRSKAGLFDVSHMGEVTVVGK 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E WL S+ DV + G+ ++ E GG+ DDL+V + + LV NA+ + D
Sbjct: 60 DSEAWLNSLLTNDVTTMHDGQVLYTIMCRENGGVVDDLLVYRYNTERYLLVINAANVEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD-LDLSSL-YFMTS 374
+ L D+ + +SA + +A+QGPL+ IL + + D + L +F
Sbjct: 120 WAWF------NEHLKGDVKIDNISA-KTAEVALQGPLAEKILCKIAEGFDPTKLVFFHFV 172
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 430
+AGIP ++R GYTGEDG EI V + + +A+++ E + GLGARDSL
Sbjct: 173 DGVKVAGIPAIVSRTGYTGEDGFEIYVDWSKGAELWDAIIAAGKPEGLMPIGLGARDSL 231
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 472 IAVQGPLSSTILQRHTD-LDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGE 529
+A+QGPL+ IL + + D + L +F +AGIP ++R GYTGEDG EI V
Sbjct: 143 VALQGPLAEKILCKIAEGFDPTKLVFFHFVDGVKVAGIPAIVSRTGYTGEDGFEIYVDWS 202
Query: 530 QCTHIVEALLSD---EDVKLAGLGARDSL 555
+ + +A+++ E + GLGARDSL
Sbjct: 203 KGAELWDAIIAAGKPEGLMPIGLGARDSL 231
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 20 GFPGASIIQSQIKSGVSRK--RTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKK 77
GF G +++ Q G+ RK T GVP R E+ +A+ + VG +T+G +PSL
Sbjct: 266 GFIGQKVLRQQKAEGLKRKIVFTKMIDKGVP-RHEMEVADASGKVVGCVTTGGYAPSLDA 324
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVT 109
NIA + VG LW+ +R K V+V
Sbjct: 325 NIASCLVNMPVPAVGENLWILIRGKAKKVEVV 356
>gi|302383825|ref|YP_003819648.1| glycine cleavage system protein T [Brevundimonas subvibrioides ATCC
15264]
gi|302194453|gb|ADL02025.1| glycine cleavage system T protein [Brevundimonas subvibrioides ATCC
15264]
Length = 371
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 118/232 (50%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
T L H + G +MV F G+ MPVQY V A H TR +FDVSHM Q +TG
Sbjct: 9 TVLNAAHRALGARMVGFGGYDMPVQYEGV--LAEHRWTREHAGLFDVSHMGQCKITGADA 66
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E D L G+ SL NE GGI DDL+ K D L++V NA + D
Sbjct: 67 IAQFERFVPGDYAALKAGRQKYSLLLNEDGGIIDDLMAGKPDHDGLYVVVNAGNKDEDFA 126
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
A L D L L ++R LIA+QGP ++ ++ H + L+ FM
Sbjct: 127 FWRA------HLSGDATLTVL--DDRALIAIQGPEAAEVMIAHEPV-LAEFGFMDCARLM 177
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C ++R+GYTGEDG EISVP + + +L D VK GLGARDSL
Sbjct: 178 LFGVDCFVSRSGYTGEDGYEISVPAAEAERVWNTILEDARVKPIGLGARDSL 229
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNANDQRVGAITSGCP 71
K R E F GA+ I + G +R R G + G P R G EI +AN +G +TSG P
Sbjct: 259 KSRMEAADFNGAARILKERAEGPARVRVGLSVKEGAPAREGAEIADANGTVIGTVTSGGP 318
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKI 124
SP+L +NIAMGY+ P+++ +G +L V VR + +V PFV Y+ PK+
Sbjct: 319 SPTLGRNIAMGYVPPSHAALGTDLQVIVRGRAAAAEVIDTPFVAQRYFRKPKV 371
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++R LIA+QGP ++ ++ H + L+ FM + G+ C ++R+GYTGEDG EISV
Sbjct: 142 DDRALIAIQGPEAAEVMIAHEPV-LAEFGFMDCARLMLFGVDCFVSRSGYTGEDGYEISV 200
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + + +L D VK GLGARDSL
Sbjct: 201 PAAEAERVWNTILEDARVKPIGLGARDSL 229
>gi|258568996|ref|XP_002585242.1| glycine cleavage system T protein [Uncinocarpus reesii 1704]
gi|237906688|gb|EEP81089.1| glycine cleavage system T protein [Uncinocarpus reesii 1704]
Length = 391
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 135/244 (55%), Gaps = 27/244 (11%)
Query: 212 MVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVH 271
MVPFAG+SMP+QY S SH TR+ S+FDVSHM+Q + G +++L I + +
Sbjct: 1 MVPFAGYSMPLQYADQSHLESHHWTRAHASLFDVSHMVQHHLIGPGAQDFLMKITPSSLD 60
Query: 272 ELDPGKGTLSLFTNE-QGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFK-- 328
+L TLS E GGI DD ++T+ +S + V+NA RRK D++ + + F+
Sbjct: 61 KLKDNHSTLSCLLEEGTGGIVDDTVITRLGPESFYFVTNAGRRKEDLEFLSKEIEAFRQT 120
Query: 329 ----SLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-------RHTDLDLSSLYFMTSRPC 377
+ IH L + R L+A+QGP S+ +LQ + DLS+L+F R
Sbjct: 121 HDPSARASVIHWSIL--DNRALLALQGPSSAAVLQALVTQGEASVESDLSTLHFGQCRQL 178
Query: 378 TI-----AGIPCTL--TRAGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGA 426
+ + P L +R GYTGEDG EIS+P EQ I E LLS+ +V+LAGL A
Sbjct: 179 HLSFPDGSHTPARLLISRTGYTGEDGFEISIPTEQDAQLPRRIAELLLSNPEVRLAGLAA 238
Query: 427 RDSL 430
RDSL
Sbjct: 239 RDSL 242
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 64/115 (55%), Gaps = 20/115 (17%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQR-------HTDLDLSSLYFMTSRPCTIA-----G 506
IH L + R L+A+QGP S+ +LQ + DLS+L+F R ++
Sbjct: 130 IHWSIL--DNRALLALQGPSSAAVLQALVTQGEASVESDLSTLHFGQCRQLHLSFPDGSH 187
Query: 507 IPCTL--TRAGYTGEDGVEISVPGEQCTH----IVEALLSDEDVKLAGLGARDSL 555
P L +R GYTGEDG EIS+P EQ I E LLS+ +V+LAGL ARDSL
Sbjct: 188 TPARLLISRTGYTGEDGFEISIPTEQDAQLPRRIAELLLSNPEVRLAGLAARDSL 242
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 35 VSRKRTGFT-STGVPIRPGYEIFNANDQR--VGAITSGCPSPSLK-KNIAMGYIEPAYSK 90
+ +R G T G P R G I + D + VG ITSG PSP+L NIAMGYI K
Sbjct: 301 LKERRIGLTIEAGAPAREGAAIVDLADGKTQVGVITSGLPSPTLNGANIAMGYINQGLHK 360
Query: 91 VGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
G E+ V VR K VT MP+++S +Y
Sbjct: 361 KGTEVGVLVRKKLRKATVTPMPWIESKFY 389
>gi|114567495|ref|YP_754649.1| aminomethyltransferase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338430|gb|ABI69278.1| aminomethyltransferase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 366
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 135/243 (55%), Gaps = 12/243 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L+ +H + G+MV F G+ +P+QY SI H R K +FDVSHM + V G+
Sbjct: 4 KRTALFPVHQKYNGRMVDFGGWELPIQYE--SIIKEHHMVRKKAGLFDVSHMGEIEVRGE 61
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E +L+ + D++++ PG+ ++ GG+ DDL+V K + LV NA+ D
Sbjct: 62 KAEAFLQYLLSNDINKIAPGQVQYNIMCYPDGGVVDDLLVYKYTTEHYLLVVNAA--NTD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
D ++ F + ++ LS ++ +A+QGPL+ ILQ+ TDL+L S+ Y+
Sbjct: 120 KDFEWIKKNAFPG----VEIENLS-DDYAQMAIQGPLAEQILQKLTDLELHSIKYYWFQA 174
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSLSGD 433
IAG ++R GYTGEDG EI + E + EA+L+ ED+ GLGARDSL +
Sbjct: 175 NVEIAGKIAIISRTGYTGEDGFEIYLAPEDAIDVWEAILAAGGEDIAPIGLGARDSLRFE 234
Query: 434 ITL 436
L
Sbjct: 235 AKL 237
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGPL+ ILQ+ TDL+L S+ Y+ IAG ++R GYTGEDG EI + E
Sbjct: 145 MAIQGPLAEQILQKLTDLELHSIKYYWFQANVEIAGKIAIISRTGYTGEDGFEIYLAPED 204
Query: 531 CTHIVEALLS--DEDVKLAGLGARDSL 555
+ EA+L+ ED+ GLGARDSL
Sbjct: 205 AIDVWEAILAAGGEDIAPIGLGARDSL 231
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 5 SRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQR 62
+RL IF + + G F G + Q +S R + G+P R YE+ +
Sbjct: 253 ARLGIFV---KFDCGDFIGREALLRQKESQPPRVQAELLMLERGIP-RSHYEVCQEG-KV 307
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+G ++SG +PSL+KN+A+ ++ Y + G E+ V +R+K V ++ F +
Sbjct: 308 IGQLSSGGLAPSLEKNLALALVDREYYQPGAEVEVMIRNKPVKAQIVTGAFYR 360
>gi|299532151|ref|ZP_07045545.1| glycine cleavage system T protein [Comamonas testosteroni S44]
gi|298719813|gb|EFI60776.1| glycine cleavage system T protein [Comamonas testosteroni S44]
Length = 378
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 128/232 (55%), Gaps = 11/232 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LH G +MVPFAG++MPVQY + A HLHTR +FDVSHM Q ++ G
Sbjct: 13 TPLFALHQKLGARMVPFAGYAMPVQY-PQGLMAEHLHTRKAAGLFDVSHMGQLLLRGPDA 71
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
LES+ DV +L K L +EQGGI DDL+ D LFL+ N + ++ D
Sbjct: 72 AAALESLMPVDVMDLGLHKQRYGLLLDEQGGILDDLMFVNR-GDDLFLIVNGACKEAD-- 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ Q R S + + ER L+A+QGP + T L R ++ L FMT
Sbjct: 129 -IAHIQSRIAS-----RCEVVPLPERALLALQGPQAVTALSRLIP-GVTQLLFMTGNYFD 181
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G +TR+GYTGEDG EIS+PGE EALL+ +V GLGAR+SL
Sbjct: 182 WQGHALYITRSGYTGEDGFEISLPGEAAEAFAEALLAQPEVAPIGLGARNSL 233
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 19 GGFPGASIIQSQIKS--GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSL 75
GGFPGA+I+ Q+++ + RKR G + +P+R + N + Q +G ITSG SP+L
Sbjct: 273 GGFPGAAIVLEQLQNPQSLRRKRVGLIALERIPVREPAVLENMDGQHIGHITSGLLSPTL 332
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ +A+ Y+EP Y+ + E++ VR K V +KV PFV + YY
Sbjct: 333 NQPVALAYVEPDYAAIDTEIFAMVRGKPVPMKVVATPFVPTRYY 376
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
ER L+A+QGP + T L R ++ L FMT G +TR+GYTGEDG EIS+P
Sbjct: 147 ERALLALQGPQAVTALSRLIP-GVTQLLFMTGNYFDWQGHALYITRSGYTGEDGFEISLP 205
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
GE EALL+ +V GLGAR+SL
Sbjct: 206 GEAAEAFAEALLAQPEVAPIGLGARNSL 233
>gi|297623317|ref|YP_003704751.1| glycine cleavage system T protein [Truepera radiovictrix DSM 17093]
gi|297164497|gb|ADI14208.1| glycine cleavage system T protein [Truepera radiovictrix DSM 17093]
Length = 362
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 126/234 (53%), Gaps = 8/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+DLHL HG +MV FAG+ MP+QY I HL R V +FDVSHM + VTG
Sbjct: 2 KRTPLFDLHLEHGARMVDFAGWEMPLQY-RTGIHTEHLAVREGVGLFDVSHMGEVRVTGP 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E +L + D L P +G S+ N++GG+ DDL V + ++ +V NA+ R+
Sbjct: 61 GAEAFLRYATLNDPSRLKPQQGQYSMLPNDRGGLIDDLYVYRDAPEAFLIVCNAANREAV 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + + D ++ L+A+QGP ++ + RH + +L++L +
Sbjct: 121 VAHLTRLSYDYDATVTD------ESDAWALLALQGPGAALLAGRHAEAELTALKKNRTLQ 174
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
T+AG TL R GYTGEDG EI E + AL+ GLGARD+L
Sbjct: 175 TTLAGCAVTLARTGYTGEDGFEIFCRPEDAPTLWRALVG-AGATPCGLGARDTL 227
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
L+A+QGP ++ + RH + +L++L + T+AG TL R GYTGEDG EI E
Sbjct: 144 LLALQGPGAALLAGRHAEAELTALKKNRTLQTTLAGCAVTLARTGYTGEDGFEIFCRPED 203
Query: 531 CTHIVEALLSDEDVKLAGLGARDSL 555
+ AL+ GLGARD+L
Sbjct: 204 APTLWRALVG-AGATPCGLGARDTL 227
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 50 RPGYEIF-NAND---------QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRV 99
RPGY + A D +VG +TSG SP ++ IAM ++ AYS+ G EL V +
Sbjct: 287 RPGYRVLAGAADVLEAESDEGTKVGEVTSGTISPLTREGIAMAWVRRAYSEPGTELAVEI 346
Query: 100 RDK 102
R +
Sbjct: 347 RGQ 349
>gi|414154549|ref|ZP_11410867.1| Aminomethyltransferase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453946|emb|CCO08771.1| Aminomethyltransferase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 364
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 12/237 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY HL+ GGKMV F G+ MPVQY I H RS +FDVSHM + ++GK
Sbjct: 5 KRTPLYHAHLAAGGKMVEFGGWLMPVQY--EGIIKEHQVVRSAAGLFDVSHMGEIKISGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + DV L PG +L N QGG DDL+V + + LV NA+ D
Sbjct: 63 GAGEFVQKVITNDVFRLRPGCAMYALLCNPQGGTIDDLLVYQLAPEQYLLVVNAANTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ G ++ +E +A+QGP + ILQ+ T +L ++ +
Sbjct: 123 YQWLA----NLAPAGVEVD---NVSETICQLALQGPAAQAILQKITAAELGAIRYFCFIN 175
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+AG+ C ++R GYTGEDG E+ + T + + +L + +K AGLGARD+L
Sbjct: 176 GQVAGVECMISRTGYTGEDGFELYFAAAKATTVWQTILEAGREAGIKPAGLGARDTL 232
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
+A+QGP + ILQ+ T +L ++ + +AG+ C ++R GYTGEDG E+ +
Sbjct: 146 LALQGPAAQAILQKITAAELGAIRYFCFINGQVAGVECMISRTGYTGEDGFELYFAAAKA 205
Query: 532 THIVEALLS---DEDVKLAGLGARDSL 555
T + + +L + +K AGLGARD+L
Sbjct: 206 TTVWQTILEAGREAGIKPAGLGARDTL 232
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + + ++G + + G G+P R GY+I + VG +TSG +P+L KN
Sbjct: 267 FIGREALLQEKQAGATHRLVGLEMIDRGIP-RQGYQICK-DGLPVGWVTSGSFAPTLNKN 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+A+GY+ ++ G EL V VR+K + +V + PF K
Sbjct: 325 LALGYVAAQWTDTGSELEVMVRNKPLKARVVQKPFYK 361
>gi|332292910|ref|YP_004431519.1| glycine cleavage system T protein [Krokinobacter sp. 4H-3-7-5]
gi|332170996|gb|AEE20251.1| glycine cleavage system T protein [Krokinobacter sp. 4H-3-7-5]
Length = 363
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 134/239 (56%), Gaps = 12/239 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ T L ++H S G KMVPFAG++MPV Y V++ H R+ V VFDVSHM + +V+G+
Sbjct: 2 KNTALTEVHESLGAKMVPFAGYNMPVSYEGVNV--EHEVVRNGVGVFDVSHMGEFLVSGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ L+ +C DV +++ G + F N+ GGI DDLIV + ED LV NAS +D
Sbjct: 60 NALSLLQWVCSNDVSKINVGGAQYNCFPNDTGGIVDDLIVYRIKEDQYMLVVNASN--ID 117
Query: 317 MDL-MVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
D + Q+ KS D L+ +S + L+A+QGP + +Q T++DL+S+ F T
Sbjct: 118 KDWAWLETQNTLKSF--DAELRNIS-DGHSLLAIQGPKAIEAMQSLTEVDLASIKFYTFE 174
Query: 376 PCTIAGIPCTLTRA-GYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
AGI + A GYTG G EI E + E + +D ++K GL ARD+L
Sbjct: 175 VAPFAGIENVIISATGYTGSGGFEIYCKNEDAAQLWENVFKAGADWNIKPIGLAARDTL 233
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 27 IQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYI 84
+++Q + G+ +K GF T G+P R GY+I + ++ ++G +TSG PS+ K I MGY+
Sbjct: 273 LKAQKEQGLRQKLVGFELTERGIP-RQGYDIVDGDNNKIGNVTSGTMGPSVNKGIGMGYV 331
Query: 85 EPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ A++K ++++++R V V K PF K
Sbjct: 332 DTAFAKADSKIFIQIRKNLVPATVVKTPFYK 362
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA-GYTGEDGVEISVPGE 529
L+A+QGP + +Q T++DL+S+ F T AGI + A GYTG G EI E
Sbjct: 145 LLAIQGPKAIEAMQSLTEVDLASIKFYTFEVAPFAGIENVIISATGYTGSGGFEIYCKNE 204
Query: 530 QCTHIVEALL---SDEDVKLAGLGARDSL 555
+ E + +D ++K GL ARD+L
Sbjct: 205 DAAQLWENVFKAGADWNIKPIGLAARDTL 233
>gi|301629455|ref|XP_002943855.1| PREDICTED: hypothetical protein LOC100488488 [Xenopus (Silurana)
tropicalis]
Length = 829
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 142/277 (51%), Gaps = 21/277 (7%)
Query: 191 SSPSAEQR--TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHM 248
S+P+A TPL LH+ G +MVPFAG+SMPVQY + A HLHTR +FDVSHM
Sbjct: 453 STPAAASLLITPLNALHVELGARMVPFAGYSMPVQY-PTGLMAEHLHTRQAAGLFDVSHM 511
Query: 249 LQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS 308
Q + G E++ DV L GK L N+ GGI DDL+ D+LF++
Sbjct: 512 GQLKLVGPGAAAAFETLVPVDVIGLPEGKQRYGLLLNDAGGIIDDLMFFNQGGDTLFVIV 571
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
N + + D+ + Q R + L + GL+A+QGP ++T L R +
Sbjct: 572 NGACKAGDVAHI---QARIGD-----RCRVLPMPDYGLLALQGPQAATALSRLVP-GVEK 622
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
FM+ T G+ +TR+GYTGEDG EISVP Q + ALL+ +VK GLGAR+
Sbjct: 623 HSFMSGGGVTWKGVDLFITRSGYTGEDGFEISVPSAQAEALARALLAQPEVKPIGLGARN 682
Query: 429 SL---------SGDITLNTPVPHGSLKLSNDRFKSLG 456
SL DI T P G+L + + + G
Sbjct: 683 SLRLEAGLCLYGNDIDTTTTPPEGALHWAIQKVRRSG 719
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 13 KRRR----ETGGFPGASIIQSQIK--SGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGA 65
K RR GGFPGA + +QI + ++RKR G + VP+R + N + Q +G
Sbjct: 714 KVRRSGGARAGGFPGADKVLAQIDDPALLTRKRVGLIAQERVPVREPAALQNRDGQAIGQ 773
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+TSG SP+L + IA+ + P Y+ G E++ VR K V + V PFV + YY
Sbjct: 774 VTSGLLSPTLNQPIALASVRPDYAAPGTEVFAMVRGKPVPMVVAPTPFVPTRYY 827
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+ GL+A+QGP ++T L R + FM+ T G+ +TR+GYTGEDG EISVP
Sbjct: 598 DYGLLALQGPQAATALSRLVP-GVEKHSFMSGGGVTWKGVDLFITRSGYTGEDGFEISVP 656
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
Q + ALL+ +VK GLGAR+SL
Sbjct: 657 SAQAEALARALLAQPEVKPIGLGARNSL 684
>gi|341613601|ref|ZP_08700470.1| glycine cleavage system aminomethyltransferase T [Citromicrobium
sp. JLT1363]
Length = 372
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 126/226 (55%), Gaps = 12/226 (5%)
Query: 205 HLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLES 264
H +HG +MVPFAG+ MP+QY I A H TR+ +FDVSHM Q ++G + LE+
Sbjct: 20 HRAHGARMVPFAGYEMPIQY--EGIVAEHDWTRAHAGLFDVSHMGQLTLSGDGAAQALEA 77
Query: 265 ICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQ 324
+ V L PGK SL E GGI DDL++T T E + LV N + + D+ +
Sbjct: 78 LVPGLVSSLKPGKMRYSLLLAEDGGILDDLMITNTGE-HIALVVNGACKWDDIAFL---- 132
Query: 325 DRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 384
+ L +I L +E+ L+A+QGP + L + L FMT+ G+P
Sbjct: 133 --REHLPDEITLTH--HDEQALLALQGPEAVDALGELVP-GAAELVFMTAGYYDWNGVPL 187
Query: 385 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
++RAGYTGEDG EISVP E + AL+ D+ VK GLGARDSL
Sbjct: 188 WISRAGYTGEDGFEISVPAEHAEKLATALVEDKRVKPIGLGARDSL 233
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
K+RRE+GG+ G I + + G R R G G +P R G EIF A D +VG +TSG
Sbjct: 263 KKRRESGGYHGHERISAALLDGSQRTRIGLVLDGRLPAREGSEIF-AGDTQVGTVTSGGF 321
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L IAMGY+E +++G L V+VR KR+ +V +MPFV YY
Sbjct: 322 SPTLGHPIAMGYVEAGRAEIGTALEVQVRSKRLPARVAQMPFVPHRYY 369
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E+ L+A+QGP + L + L FMT+ G+P ++RAGYTGEDG EISV
Sbjct: 146 DEQALLALQGPEAVDALGELVP-GAAELVFMTAGYYDWNGVPLWISRAGYTGEDGFEISV 204
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E + AL+ D+ VK GLGARDSL
Sbjct: 205 PAEHAEKLATALVEDKRVKPIGLGARDSL 233
>gi|83950575|ref|ZP_00959308.1| hypothetical protein ISM_05735 [Roseovarius nubinhibens ISM]
gi|83838474|gb|EAP77770.1| hypothetical protein ISM_05735 [Roseovarius nubinhibens ISM]
Length = 374
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 127/243 (52%), Gaps = 30/243 (12%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL LH G KMVPFAG+ MPVQY + + HLH R++ +FDVSHM Q ++
Sbjct: 7 TPLNALHRELGAKMVPFAGYDMPVQY-KLGVMKEHLHCRAEAGLFDVSHMGQVILRHPDG 65
Query: 259 EEW----LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRK 314
E LES+ DV L G+ FTNE GGI DDL++ D LF+V NA+ ++
Sbjct: 66 VEAAALALESLVPVDVAGLASGRQRYGFFTNEAGGIMDDLMLANR-GDHLFVVVNAACKE 124
Query: 315 VDMDLMVAAQDRFKSLGKDIHLQFLSAEE---RGLIAVQGPLSSTILQRH----TDLDLS 367
D+ M A HL EE R L+A+QGP + +L+ D+
Sbjct: 125 ADIAHMRA------------HLTGCEVEEISDRALLALQGPKAEAVLEALVPGVADMRFM 172
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
+ M S + ++R+GYTGEDG EISVP + ALLS E V+ GLGAR
Sbjct: 173 DVAIMASEYGEL-----WISRSGYTGEDGYEISVPASEAEEFARALLSHEAVEPIGLGAR 227
Query: 428 DSL 430
DSL
Sbjct: 228 DSL 230
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 19 GGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNAND--QRVGAITSGCPSPSL 75
GGFPGA I +++ G +R R G G P+R G E++ + +G +TSG P++
Sbjct: 270 GGFPGAERILAELSDGAARHRVGLRPEGRAPMREGTELYAEAEGGTPIGRVTSGAFGPTI 329
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+ ++MGY+ S G +L+ VR KR V V +PF +N+
Sbjct: 330 EAPMSMGYVPKDVSAEGTQLFGDVRGKRQPVTVAALPFTPANF 372
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 468 ERGLIAVQGPLSSTILQRH----TDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVE 523
+R L+A+QGP + +L+ D+ + M S + ++R+GYTGEDG E
Sbjct: 144 DRALLALQGPKAEAVLEALVPGVADMRFMDVAIMASEYGEL-----WISRSGYTGEDGYE 198
Query: 524 ISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
ISVP + ALLS E V+ GLGARDSL
Sbjct: 199 ISVPASEAEEFARALLSHEAVEPIGLGARDSL 230
>gi|340504004|gb|EGR30497.1| hypothetical protein IMG5_130480 [Ichthyophthirius multifiliis]
Length = 939
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 127/214 (59%), Gaps = 6/214 (2%)
Query: 218 FSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGK 277
+ MPVQY + HLHTR S+FDVSHM Q + GK +++E + V D+ +
Sbjct: 591 YEMPVQYPE-GVLKEHLHTRQSSSLFDVSHMGQIKIYGKDSVDFIEKLVVGDIRGKKEQE 649
Query: 278 GTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQ 337
G LSL NE+ GI DD IVTK E+ + +V N + + +D++ M ++++ DI +Q
Sbjct: 650 GFLSLILNEKAGIIDDTIVTK-FENHIHMVVNGANKFIDLEHMQKLKEQYFP-KADIKIQ 707
Query: 338 FLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA-GIPCTLTRAGYTGEDG 396
+ +++ LIA+QGP + + Q+ T++DLS + FM + + G+ R GYTGEDG
Sbjct: 708 Y--EDQKSLIAIQGPKTEEVFQQLTNVDLSKILFMQHQKIQLKNGLEVLACRCGYTGEDG 765
Query: 397 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
E+S+ ++ + + LL + +K AGLGARDSL
Sbjct: 766 FELSIENDKIVQLTDLLLQNPLIKPAGLGARDSL 799
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCP 71
+ + E F G ++ Q K GV +KR GF G I RP ++F+ N +VG + SG
Sbjct: 830 QSKEEKQCFLGNDVLAKQRKEGVKQKRVGFLIKGSGILRPVCDVFDQNKNKVGYVCSGTY 889
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SP LKK I M Y+ + S VG EL V + K +++ KMPFV++ Y
Sbjct: 890 SPMLKKGIGMMYVSTSLSSVGQELIVNQKGKDYPIQIVKMPFVEAKY 936
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIA-GIPCTLTRAGY 516
DI +Q+ +++ LIA+QGP + + Q+ T++DLS + FM + + G+ R GY
Sbjct: 703 DIKIQY--EDQKSLIAIQGPKTEEVFQQLTNVDLSKILFMQHQKIQLKNGLEVLACRCGY 760
Query: 517 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TGEDG E+S+ ++ + + LL + +K AGLGARDSL
Sbjct: 761 TGEDGFELSIENDKIVQLTDLLLQNPLIKPAGLGARDSL 799
>gi|328950310|ref|YP_004367645.1| aminomethyltransferase [Marinithermus hydrothermalis DSM 14884]
gi|328450634|gb|AEB11535.1| Aminomethyltransferase [Marinithermus hydrothermalis DSM 14884]
Length = 354
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 125/234 (53%), Gaps = 9/234 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPLY+ H G +MV FAG++MP+QY SI A HL R V VFDVSHM + V G
Sbjct: 2 KHTPLYENHQKLGARMVDFAGWAMPIQY--TSINAEHLAVRQGVGVFDVSHMGEFWVRGP 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+L+ + + D L G+ S+ N GG+ DD+ + +T E +V NA+ + D
Sbjct: 60 EALEFLQYVTLNDAARLKVGRAQYSMLPNANGGVVDDVYLYRTGEREYLMVVNAANIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ A R+K + L+ SA + L+AVQGP + +L D+ L+ +
Sbjct: 120 FAHLAAIAPRYK-----VELEDASA-DWALLAVQGPQAEALLAGLVDVPLAEKRKNSVFE 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG P L R GYTGEDG E+ V E + EALL V GLGARD+L
Sbjct: 174 ARLAGRPARLARTGYTGEDGFEVFVRPEDAPAVWEALLEAGAVP-CGLGARDTL 226
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 417 EDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQG 476
+DV L G R+ L N L R+K +D + L+AVQG
Sbjct: 95 DDVYLYRTGEREYLMVVNAANIEKDFAHLAAIAPRYKVELEDASADW------ALLAVQG 148
Query: 477 PLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVE 536
P + +L D+ L+ + +AG P L R GYTGEDG E+ V E + E
Sbjct: 149 PQAEALLAGLVDVPLAEKRKNSVFEARLAGRPARLARTGYTGEDGFEVFVRPEDAPAVWE 208
Query: 537 ALLSDEDVKLAGLGARDSL 555
ALL V GLGARD+L
Sbjct: 209 ALLEAGAVP-CGLGARDTL 226
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 46 GVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVD 105
GVP R GY + + VG +TSG SP L+K IA+ Y+E A+++ G EL V VR K
Sbjct: 283 GVP-RAGYTVLR-EGRPVGRVTSGTMSPVLRKGIALAYVEEAFAEEGTELLVEVRGKPYP 340
Query: 106 VKVTKMPFV 114
+V K PFV
Sbjct: 341 ARVVKPPFV 349
>gi|15807654|ref|NP_295535.1| aminomethyltransferase, putative [Deinococcus radiodurans R1]
Length = 447
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 138/282 (48%), Gaps = 11/282 (3%)
Query: 151 RVDVKVTKMPFLKSNYHTPPKYFLKFLSFFSGLTFVFSPGSSPSAE--QRTPLYDLHLSH 208
R + TK P PPK + + P + P A +RTPL+ H
Sbjct: 85 RREAPATKGPPQLQYAAKPPKVSVHTARTCAPPVAYSFPVTQPDATPLRRTPLHAAHQKA 144
Query: 209 GGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVA 268
G +MVPF G+ MPVQY V A H R VFDVSHM + VTG ++L+ +
Sbjct: 145 GARMVPFGGWDMPVQYAGVK--AEHEAVRKNAGVFDVSHMGEFRVTGPDALKFLQHVTPN 202
Query: 269 DVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFK 328
DV +L PG+ + NE+GG+ DD+ + D +V NA +D D A
Sbjct: 203 DVSKLRPGRAQYNWLPNERGGLVDDIYIYMAAPDEYLMVVNAG--NIDKDW---AHLNAL 257
Query: 329 SLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 388
+ G D+ L S + L+AVQGP ++ +LQ HTD+DLS+ + G L R
Sbjct: 258 TAGYDVQLANES-DNWALLAVQGPQAAALLQPHTDVDLSAKKKNAYFAAKLFGHDVRLAR 316
Query: 389 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
GYTGEDG E+ V Q + + LL+ + AGLGARD+L
Sbjct: 317 TGYTGEDGFEVFVDAAQAEALWDELLA-LGITPAGLGARDTL 357
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 454 SLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTR 513
+ G D+ L S + L+AVQGP ++ +LQ HTD+DLS+ + G L R
Sbjct: 258 TAGYDVQLANES-DNWALLAVQGPQAAALLQPHTDVDLSAKKKNAYFAAKLFGHDVRLAR 316
Query: 514 AGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GYTGEDG E+ V Q + + LL+ + AGLGARD+L
Sbjct: 317 TGYTGEDGFEVFVDAAQAEALWDELLA-LGITPAGLGARDTL 357
>gi|239624330|ref|ZP_04667361.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520716|gb|EEQ60582.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 384
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 131/239 (54%), Gaps = 12/239 (5%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E++TPLYD H+ + GK+VPFAG+ +PVQY + H+ R++ +FDVSHM + + G
Sbjct: 26 ERKTPLYDTHVKYKGKIVPFAGYLLPVQYDT-GVIGEHMAVRTRCGLFDVSHMGEIICKG 84
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
K + L + D + G+ S NE+GG+ DDLIV K +D F+V NAS +
Sbjct: 85 KDALKNLNMLLTNDYTVMAEGQARYSPMCNEEGGVVDDLIVYKVRDDCYFIVVNASNKDK 144
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR-HTDLDLSSLYFMTS 374
D M A Q D+ + +S + +A+QGP + +L++ + ++ Y+
Sbjct: 145 DYAWMKAHQS------GDVVFEDIS-DRVAQLALQGPKAMDVLKKVAKEEEIPDKYYTCR 197
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 430
C I + C +++ GYTGEDGVEI + E + E L+ + E + GLGARD+L
Sbjct: 198 FDCMIGDVRCIISKTGYTGEDGVEIYMAPEDAPGMWELLMDNGREEGLIPCGLGARDTL 256
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQR-HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + +L++ + ++ Y+ C I + C +++ GYTGEDGVEI + E
Sbjct: 169 LALQGPKAMDVLKKVAKEEEIPDKYYTCRFDCMIGDVRCIISKTGYTGEDGVEIYMAPED 228
Query: 531 CTHIVEALLSD---EDVKLAGLGARDSL 555
+ E L+ + E + GLGARD+L
Sbjct: 229 APGMWELLMDNGREEGLIPCGLGARDTL 256
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 32 KSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKV 91
K ++RKR G TG I ++ D+++G TSG P L AM ++ Y +
Sbjct: 300 KGPLTRKRVGLKVTGRGIIREHQPVYIGDRQIGMTTSGTHCPYLGYPAAMALVDIGYKEP 359
Query: 92 GVELWVRVRDKRVDVKVTKMPFVK 115
G + V VR +RV +V K+PF K
Sbjct: 360 GTAVEVEVRGRRVAAEVVKLPFYK 383
>gi|375011682|ref|YP_004988670.1| glycine cleavage system T protein [Owenweeksia hongkongensis DSM
17368]
gi|359347606|gb|AEV32025.1| glycine cleavage system T protein [Owenweeksia hongkongensis DSM
17368]
Length = 359
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 129/238 (54%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ L DLH+ G KMVPFAG++MP+QY +++ HLH RSKV +FDVSHM + V+G
Sbjct: 2 KNIELNDLHIELGAKMVPFAGYNMPLQYEGLNV--EHLHVRSKVGIFDVSHMGEFFVSGD 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++L+ + DV +L GK S N++GGI DDL+V + E LV NAS + D
Sbjct: 60 GALDFLQKVTTNDVSKLTDGKVQYSCMPNDKGGIVDDLLVYRISEKEYMLVVNASNIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + D L +++ L AVQGP + LQ T+++L + + T
Sbjct: 120 WNWLSSHNDTGA-------LMVDESDDYSLFAVQGPEAVKALQSLTEINLEEMVYYTFDR 172
Query: 377 CTIAGIPCTLTRA-GYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
T AG+ A GYTG G EI V + + + ++ ++ D+K GL ARD+L
Sbjct: 173 GTFAGVDNVFVSATGYTGSGGFEIYVKNKDAKKVWDKIMEAGAEHDIKPIGLAARDTL 230
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 18 TGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSL 75
T F G+ + Q + G S++ GF G+P R Y I N + +G +TSG +PSL
Sbjct: 261 TKDFIGSEGFKKQKEEGASKRLVGFEMIDRGIP-RKDYAIKNEGGEVIGRVTSGTQAPSL 319
Query: 76 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ I +GY++ AY E+++ +R+K V KV KMPFVK
Sbjct: 320 GQAIGIGYVDTAYKAADTEIYIDIRNKMVKAKVVKMPFVK 359
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA-GYTGEDGVEIS 525
++ L AVQGP + LQ T+++L + + T T AG+ A GYTG G EI
Sbjct: 138 DDYSLFAVQGPEAVKALQSLTEINLEEMVYYTFDRGTFAGVDNVFVSATGYTGSGGFEIY 197
Query: 526 VPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
V + + + ++ ++ D+K GL ARD+L
Sbjct: 198 VKNKDAKKVWDKIMEAGAEHDIKPIGLAARDTL 230
>gi|330813961|ref|YP_004358200.1| glycine cleavage system protein T [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487056|gb|AEA81461.1| aminomethyltransferase (glycine cleavage system T protein)
[Candidatus Pelagibacter sp. IMCC9063]
Length = 364
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 130/234 (55%), Gaps = 12/234 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T L+D H+S G KMVPFAG+ MP+QY + I H R+ +FDVSHM Q + G
Sbjct: 5 KTALFDFHVSQGAKMVPFAGYEMPIQY-SFGIINEHDKVRAAAGIFDVSHMGQFSIVGDD 63
Query: 258 RE-EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+E I D+ L + S NEQGGI DDLIVT+ +++ + +V NA+ + D
Sbjct: 64 SVCSAIEKIIPIDLSVLKMNQSKYSFLMNEQGGIDDDLIVTR-VKNGINIVLNAACKHSD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + K++ + L + LIAVQGPL+ +IL+ ++ L FM
Sbjct: 123 VKTL-------KNILPNPDCATLH-DHLALIAVQGPLAVSILEEIVP-GVADLKFMNGGE 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G +TR+GYTGEDG EIS+ E+ T + E LLS + + GLGARDSL
Sbjct: 174 FSYNGETIYITRSGYTGEDGYEISISNEKITKLCEELLSKNKIAMIGLGARDSL 227
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQ 61
I + L+ K RR T F G ++++ ++ GV+RKR G G I R G +IF + ++
Sbjct: 247 IEADLMFGIAKNRRATFDFVGGDVVKAHVEKGVTRKRVGIKLEGKIIAREGAKIFQS-EK 305
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
VG +TSGC PS+ + +GY+ S+ G + + VR K+ K+ +PF K +Y
Sbjct: 306 EVGVVTSGCFGPSVGSAVVIGYVNFDCSEEGTSVELEVRGKQYPAKICLLPFYKKSY 362
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
LIAVQGPL+ +IL+ ++ L FM + G +TR+GYTGEDG EIS+ E+
Sbjct: 144 LIAVQGPLAVSILEEIVP-GVADLKFMNGGEFSYNGETIYITRSGYTGEDGYEISISNEK 202
Query: 531 CTHIVEALLSDEDVKLAGLGARDSL 555
T + E LLS + + GLGARDSL
Sbjct: 203 ITKLCEELLSKNKIAMIGLGARDSL 227
>gi|373954660|ref|ZP_09614620.1| Aminomethyltransferase [Mucilaginibacter paludis DSM 18603]
gi|373891260|gb|EHQ27157.1| Aminomethyltransferase [Mucilaginibacter paludis DSM 18603]
Length = 359
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ T L D H++ G KMVPFAG++MPVQY I A H R V VFDVSHM + ++ G
Sbjct: 2 KNTALTDTHINLGAKMVPFAGYNMPVQYAG--INAEHETVRKAVGVFDVSHMGEFILKGD 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
H + ++ + D +L GK S NE GGI DDL+V + + LV NAS + D
Sbjct: 60 HALDLIQKVTSNDASKLYDGKVQYSCLPNEDGGIVDDLLVYRVDAKTYMLVVNASNIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
D + ++ + G D+ ++ L+A+QGP ++ LQ TDLDL+S+ + T
Sbjct: 120 WDWI----SKYNTFGVDMK---NISDRTSLLAIQGPKAAEALQSLTDLDLASMEYYTFSK 172
Query: 377 CTIAGIPCTLTRA-GYTGEDGVEISVPGEQCTHIVEALLSDED---VKLAGLGARDSL 430
AG+ L A GYTG G E+ E I +A+ + +K GLGARD+L
Sbjct: 173 GKFAGVDNVLVSATGYTGAGGFEVYFDNEYAEEIWKAIFKAGEPFGIKPIGLGARDTL 230
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F ++ +Q+Q ++GVSR+ G G+P R YEI +A+ +G +TSG SPSL+K
Sbjct: 264 FTNSAALQAQKQAGVSRRLVGIEMIDRGIP-RHDYEITDADGNTIGKVTSGTQSPSLQKP 322
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I MGY+ ++K G E+++++RD ++ KV K PF K
Sbjct: 323 IGMGYVNTEFAKEGTEIYIKIRDNQIKAKVAKPPFYK 359
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA-GYTGEDGVEISVPGE 529
L+A+QGP ++ LQ TDLDL+S+ + T AG+ L A GYTG G E+ E
Sbjct: 142 LLAIQGPKAAEALQSLTDLDLASMEYYTFSKGKFAGVDNVLVSATGYTGAGGFEVYFDNE 201
Query: 530 QCTHIVEALLSDED---VKLAGLGARDSL 555
I +A+ + +K GLGARD+L
Sbjct: 202 YAEEIWKAIFKAGEPFGIKPIGLGARDTL 230
>gi|242279398|ref|YP_002991527.1| glycine cleavage system T protein [Desulfovibrio salexigens DSM
2638]
gi|242122292|gb|ACS79988.1| glycine cleavage system T protein [Desulfovibrio salexigens DSM
2638]
Length = 353
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 128/237 (54%), Gaps = 9/237 (3%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A + TPL + H +G K+VPFAGF MPVQY I A H TR KV VFD+SHM + +
Sbjct: 2 TALRTTPLTEWHRENGAKLVPFAGFEMPVQYAG--IIAEHKQTREKVGVFDISHMGEFKL 59
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
+GK ++ L + ++ L PGK N++GG+ DDLI+ EDS LV N +
Sbjct: 60 SGKGAKDGLNKLVSQNLDTLAPGKCRYGFLPNDKGGVLDDLIIYCLAEDSYMLVVNGACE 119
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D + + + L + ++ + +S E I +QGPL+ +L+ D L +
Sbjct: 120 EGDFNWIDS------RLPEGLNFENISY-ETAKIDLQGPLALDVLESVFGRDFKHLKYFN 172
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R GYTGE G E +P ++ + E L++DE V+ GLGARD+L
Sbjct: 173 FEETEFDGYKLIISRTGYTGELGYEFYLPADKALSLWEKLVADERVEPIGLGARDTL 229
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E I +QGPL+ +L+ D L + G ++R GYTGE G E +P
Sbjct: 142 ETAKIDLQGPLALDVLESVFGRDFKHLKYFNFEETEFDGYKLIISRTGYTGELGYEFYLP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
++ + E L++DE V+ GLGARD+L
Sbjct: 202 ADKALSLWEKLVADERVEPIGLGARDTL 229
>gi|120611805|ref|YP_971483.1| glycine cleavage system T protein [Acidovorax citrulli AAC00-1]
gi|120590269|gb|ABM33709.1| glycine cleavage system T protein [Acidovorax citrulli AAC00-1]
Length = 376
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 142/267 (53%), Gaps = 20/267 (7%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL+ LHL G +MVPFAG+SMPVQY A + A HLHTR +FDVSHM Q + G
Sbjct: 11 TPLHALHLELGARMVPFAGYSMPVQYPA-GLMAEHLHTRQAAGLFDVSHMGQLRLVGPDA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
E++ DV L GK L N++GGI DDL+ +D LF++ N + + D+
Sbjct: 70 AAAFETLIPVDVIGLGIGKQRYGLLLNDEGGIIDDLMFVNRGDD-LFVIVNGACKAGDIA 128
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
+ Q+R + + ++ L+A+QGP ++ L R +SL FMT
Sbjct: 129 HI---QERIGG-----RCEVIPLPDQALLALQGPQAAAALARLAP-GTASLVFMTGGRFE 179
Query: 379 IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL-------- 430
IAG C +TR+GYTGEDG EISVP Q + ALL+ +VK GLGAR+SL
Sbjct: 180 IAGCDCYVTRSGYTGEDGFEISVPAAQAEALARALLAQPEVKPIGLGARNSLRLEAGLCL 239
Query: 431 -SGDITLNTPVPHGSLKLSNDRFKSLG 456
DI T P +L + + + G
Sbjct: 240 YGNDIDTTTTPPEAALNWAIQKVRRTG 266
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 18 TGGFPGASIIQSQIK--SGVSRKRTGFTS-TGVPIRPGYEIFNANDQRVGAITSGCPSPS 74
GGFPGA + +QI S ++R+R G + VP+R + + + +G +TSG PS
Sbjct: 270 AGGFPGAEKVLAQIDDPSLLARRRVGLVARERVPVREHTALQSTDGAAIGEVTSGLLGPS 329
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ + IAM Y+ P ++ G + VR K V ++V MPF+ Y+
Sbjct: 330 VNQPIAMAYVAPEFAAAGTVVHAIVRGKAVPMEVGPMPFLPPRYH 374
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
++ L+A+QGP ++ L R +SL FMT IAG C +TR+GYTGEDG EISVP
Sbjct: 145 DQALLALQGPQAAAALARLAP-GTASLVFMTGGRFEIAGCDCYVTRSGYTGEDGFEISVP 203
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
Q + ALL+ +VK GLGAR+SL
Sbjct: 204 AAQAEALARALLAQPEVKPIGLGARNSL 231
>gi|87199867|ref|YP_497124.1| glycine cleavage system aminomethyltransferase T [Novosphingobium
aromaticivorans DSM 12444]
gi|87135548|gb|ABD26290.1| aminomethyltransferase [Novosphingobium aromaticivorans DSM 12444]
Length = 388
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 127/242 (52%), Gaps = 13/242 (5%)
Query: 193 PSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVS--ITASHLHTRSKVSVFDVSHMLQ 250
P+ PL H + GG+MV FAG+ MPVQY I A HL TR FDVSHM Q
Sbjct: 15 PTGPLALPLDQWHRARGGRMVDFAGYWMPVQYNGEGGGIIAEHLWTRESAGFFDVSHMGQ 74
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
V+G+ E LE+I D+ L G SL NE GGI DDL+VT+ +LV N
Sbjct: 75 IYVSGEGAEAALEAILPIDLSTLPLGGARYSLLLNEDGGILDDLMVTR-WGTGFYLVVNG 133
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR--HTDLDLSS 368
+ + D+ + + L ++ L L E+ L A+QGP + L+ + LS+
Sbjct: 134 ATKWDDIGHLR------EYLPDEVTLNHL--EDNALFALQGPAACAALEPLVKGEQPLSA 185
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
L FM + G+ ++R+GYTGEDG EISVP + + + + + VK GLGARD
Sbjct: 186 LTFMRGAAFRLGGVDAWISRSGYTGEDGFEISVPSTKAAELADLICAQPQVKTIGLGARD 245
Query: 429 SL 430
SL
Sbjct: 246 SL 247
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQ 61
+ + LL KRRR GGF GA + I SG + +R G G + R G + + ND
Sbjct: 267 VSADLLFGINKRRRNEGGFVGADKVLPLIASGAATRRVGLAIEGRMAAREGATVLS-NDA 325
Query: 62 RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSG SPSL++ IAM Y+ + G L + VR +++ V MPFV Y+
Sbjct: 326 EVGTVTSGGFSPSLERPIAMAYVPVDLAAPGTALSIDVRGRKLAASVVSMPFVPHRYH 383
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 467 EERGLIAVQGPLSSTILQR--HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 524
E+ L A+QGP + L+ + LS+L FM + G+ ++R+GYTGEDG EI
Sbjct: 157 EDNALFALQGPAACAALEPLVKGEQPLSALTFMRGAAFRLGGVDAWISRSGYTGEDGFEI 216
Query: 525 SVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
SVP + + + + + VK GLGARDSL
Sbjct: 217 SVPSTKAAELADLICAQPQVKTIGLGARDSL 247
>gi|255534670|ref|YP_003095041.1| glycine cleavage system aminomethyltransferase T [Flavobacteriaceae
bacterium 3519-10]
gi|255340866|gb|ACU06979.1| Aminomethyltransferase (glycine cleavage system T protein)
[Flavobacteriaceae bacterium 3519-10]
Length = 359
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
RT L+D H++ G K+VPFAGF MPVQY +T H+ R KV +FDVSHM Q V G
Sbjct: 2 NRTALFDKHVALGAKIVPFAGFDMPVQY--TGVTEEHMAVREKVGIFDVSHMGQFWVEGP 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++ L+ + +V L+ GK + N GGI DDLI+ K ++ F+V NAS + D
Sbjct: 60 TAKDLLQYVTTNNVDSLETGKAQYTCLPNGNGGIVDDLIIYKMSDEKYFVVVNASNIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+ + ++F + ++ ++E LIAVQGP +S LQ+ T+ +L+ L Y+ ++
Sbjct: 120 WNHITKYNEKFGAKLTNV------SDELSLIAVQGPKASETLQKLTETNLAELPYYHFTQ 173
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEAL-LSDEDVKL--AGLGARDSL 430
+ ++ GYTG G EI E I EAL + E L GL ARD+L
Sbjct: 174 GSVASVADVIISNTGYTGSGGFEIYFKNENAVAIWEALTAAGEKFGLLPCGLAARDTL 231
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F Q + GV+RK GF I R GY + +A +G +TSG SP I
Sbjct: 265 FVDKEFFAKQKEEGVTRKLVGFEMQERAIPRHGYAVVDAEGNEIGTVTSGTMSPMKNIGI 324
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFV 114
+GY+ ++ KVG E+++++R+K V +V K+PFV
Sbjct: 325 GLGYVAKSHLKVGSEIFIKIRNKNVPAQVVKLPFV 359
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
+E LIAVQGP +S LQ+ T+ +L+ L Y+ ++ + ++ GYTG G EI
Sbjct: 139 DELSLIAVQGPKASETLQKLTETNLAELPYYHFTQGSVASVADVIISNTGYTGSGGFEIY 198
Query: 526 VPGEQCTHIVEAL-LSDEDVKL--AGLGARDSL 555
E I EAL + E L GL ARD+L
Sbjct: 199 FKNENAVAIWEALTAAGEKFGLLPCGLAARDTL 231
>gi|229916267|ref|YP_002884913.1| glycine cleavage system T protein [Exiguobacterium sp. AT1b]
gi|229467696|gb|ACQ69468.1| glycine cleavage system T protein [Exiguobacterium sp. AT1b]
Length = 362
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 132/243 (54%), Gaps = 29/243 (11%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+DL + KMV FAGF MP+ + SI HL R V +FDVSHM + + G
Sbjct: 11 KRTPLFDL-IEPKAKMVDFAGFEMPIMFS--SIKEEHLAVRQNVGMFDVSHMGEIRIEGP 67
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS----- 311
E ++++ D+ ++ G+ +L E GG+ DDL+V + ED+ +LV NAS
Sbjct: 68 DALEQVQNLVTNDISKIKVGQAQYNLLCLEDGGVVDDLLVYRLDEDAYWLVVNASNIEKD 127
Query: 312 ----RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLS 367
RR V D++V + ++E G IA+QGP + ++LQ T++ L
Sbjct: 128 EAHIRRYVKGDVVVTNE----------------SDEYGQIAIQGPNAQSVLQTITNVALD 171
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
+ F +AG+P ++R+GYTGEDG EI E + I EAL + E V GLGAR
Sbjct: 172 EIGFFKFMNGDVAGVPSIISRSGYTGEDGFEIYARAEAISAIWEALEA-EGVTPCGLGAR 230
Query: 428 DSL 430
D+L
Sbjct: 231 DTL 233
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E G IA+QGP + ++LQ T++ L + F +AG+P ++R+GYTGEDG EI
Sbjct: 146 DEYGQIAIQGPNAQSVLQTITNVALDEIGFFKFMNGDVAGVPSIISRSGYTGEDGFEIYA 205
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
E + I EAL + E V GLGARD+L
Sbjct: 206 RAEAISAIWEALEA-EGVTPCGLGARDTL 233
>gi|452818971|gb|EME26095.1| aminomethyltransferase, partial [Galdieria sulphuraria]
Length = 318
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
M Q + G+HR +LE + V D+ L P LSL TNEQGGI DD IVT + D + +V
Sbjct: 1 MGQVRIYGRHRVSFLERLVVGDIAALPPYHAVLSLLTNEQGGIIDDTIVT-NMGDHINMV 59
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLS 367
NA R DM + ++ +S G+++ ++ E+RGL+A+QGP + +L +H DLS
Sbjct: 60 INACCRDKDMSHLQHYAEQARSKGEEVIVEL--QEQRGLVALQGPNAMKVLSKHVTEDLS 117
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGAR 427
LYFM +R + G+ C ++R GYTGEDG EISVP + I + L V+ +GLGAR
Sbjct: 118 MLYFMNARMMWVDGVECLVSRCGYTGEDGFEISVPNDSIQRIFDGLCDSSMVRPSGLGAR 177
Query: 428 DSL 430
DSL
Sbjct: 178 DSL 180
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
K RRE+GGF G +I Q+K GV R+R GF G P R G+E ++Q +G +TSG S
Sbjct: 210 KSRRESGGFLGDKVILKQLKEGVERRRVGFLLQGAPAR-GHESILVDNQVIGQVTSGVFS 268
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
P L K I MGY+E ++K G + V +R K+V ++ KMPFV ++YY
Sbjct: 269 PCLGKPIGMGYVEKKWAKSGTCIQVEIRQKQVSGELVKMPFVPNHYY 315
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 450 DRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPC 509
++ +S G+++ ++ E+RGL+A+QGP + +L +H DLS LYFM +R + G+ C
Sbjct: 77 EQARSKGEEVIVEL--QEQRGLVALQGPNAMKVLSKHVTEDLSMLYFMNARMMWVDGVEC 134
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
++R GYTGEDG EISVP + I + L V+ +GLGARDSL
Sbjct: 135 LVSRCGYTGEDGFEISVPNDSIQRIFDGLCDSSMVRPSGLGARDSL 180
>gi|448238706|ref|YP_007402764.1| aminomethyltransferase [Geobacillus sp. GHH01]
gi|445207548|gb|AGE23013.1| aminomethyltransferase [Geobacillus sp. GHH01]
Length = 364
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 134/244 (54%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+ ++ +G K + F G+ MPVQ+ SI H R++ +FDVSHM + VV G+
Sbjct: 3 KRTPLFSVYARYGAKTIEFGGWEMPVQFS--SIKEEHEAVRTRAGLFDVSHMGEIVVRGR 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV +L PG+ +L E GG DDL++ + E+ LV NA+ + D
Sbjct: 61 GSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYLLVVNAANTEKD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
+ + D+ LQ +S+E L A+QGP + +LQR TD DL++L F +
Sbjct: 121 FAWLSG------HVEGDVELQDVSSETAQL-ALQGPAAERVLQRLTDFDLAALRPFSFAD 173
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSLSG 432
++G+ ++R GYTGEDG E+ E + EA+L+ + V GLGARD+L
Sbjct: 174 GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILAAGARDSVLPCGLGARDTLRF 233
Query: 433 DITL 436
+ L
Sbjct: 234 EACL 237
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGY 516
D+ LQ +S E L A+QGP + +LQR TD DL++L F + ++G+ ++R GY
Sbjct: 131 DVELQDVSSETAQL-ALQGPAAERVLQRLTDFDLAALRPFSFADGVEVSGVKALVSRTGY 189
Query: 517 TGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
TGEDG E+ E + EA+L+ + V GLGARD+L
Sbjct: 190 TGEDGFELYCKAEDAAALWEAILAAGARDSVLPCGLGARDTL 231
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G ++++ Q + G R+ G G+P R GY +F A+ + VG +T+G SP+LKKN
Sbjct: 267 FIGQAVLKRQKEEGPPRRLVGIEMIDRGIP-RHGYLVF-ADGEEVGFVTTGTQSPTLKKN 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I + ++ + +G E+ V +R KR+ + +PF +
Sbjct: 325 IGLALVKADVAAIGREVEVDIRGKRLKANIVPIPFYR 361
>gi|116872779|ref|YP_849560.1| glycine cleavage system aminomethyltransferase T [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|123463749|sp|A0AIE9.1|GCST_LISW6 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|116741657|emb|CAK20781.1| glycine cleavage system T protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 362
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ + D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKKSETEYILVVNAANTEKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV +++ D+ + +SA E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------QNVRGDVTVTNVSA-EYGQLALQGPSAEKILSKLTDVDLSSISFFGFIED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI + + EA+L+ E V GLGARD+L
Sbjct: 177 VEVAGVKTIISRSGYTGEDGFEIYMASADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EYGQLALQGPSAEKILSKLTDVDLSSISFFGFIEDVEVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EA+L+ E V GLGARD+L
Sbjct: 202 ASADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F ND+ VG
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLTRKLVGIELIERGIP-RHDYPVF-LNDKEVGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+ NI + I+ AY+++G EL V +R+K+V K+ + PF K
Sbjct: 310 VTSGTQSPTFGTNIGLALIDTAYAELGQELEVGIRNKKVKAKIVQTPFYK 359
>gi|297543822|ref|YP_003676124.1| glycine cleavage system T protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841597|gb|ADH60113.1| glycine cleavage system T protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 368
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 134/238 (56%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+DL+ + GK++ FAG+++PVQ+ SI + H R+ +FDVSHM + +V G+
Sbjct: 5 KKTPLFDLYKKYNGKIIDFAGWALPVQFE--SIISEHEAVRNAAGLFDVSHMGEIIVKGR 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+++ D+ +L + + N GG+ DDL++ K ++ LV NA+ + D
Sbjct: 63 EAFAFLQNLITNDLSKLKENQVLYTFMCNYNGGVVDDLLIYKYSDEHFLLVVNAANIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + + +I ++E +A+QGP + +L++ TD DLS + +F
Sbjct: 123 YKWMNDNKGVYAVEINNI------SDEISELAIQGPKAEEVLEKLTDTDLSQIKFFYFKD 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
IAGI ++R GYTGEDG EI +P + + E ++ + +K AGLGARD+L
Sbjct: 177 NVKIAGINSLISRTGYTGEDGFEIYIPNKYAVELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + +L++ TD DLS + +F IAGI ++R GYTGEDG EI +P +
Sbjct: 147 LAIQGPKAEEVLEKLTDTDLSQIKFFYFKDNVKIAGINSLISRTGYTGEDGFEIYIPNKY 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E ++ + +K AGLGARD+L
Sbjct: 207 AVELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
+ + G F G + Q + G+ RK GF G+P R GYE+ A++Q++G +T+G S
Sbjct: 263 KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIP-RHGYEV-RAHNQKIGYVTTGYFS 320
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
P+LKKNI + I+ Y+K+G ++ + VR+K
Sbjct: 321 PTLKKNIGLALIDVKYAKLGNQIEIVVRNK 350
>gi|392408206|ref|YP_006444814.1| glycine cleavage system T protein [Anaerobaculum mobile DSM 13181]
gi|390621342|gb|AFM22489.1| glycine cleavage system T protein [Anaerobaculum mobile DSM 13181]
Length = 365
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 156/293 (53%), Gaps = 32/293 (10%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H++ GG++V F+G+++PVQY I HL TR+ +FDVSHM + V GK
Sbjct: 2 RKTPLYDKHVALGGRIVDFSGWALPVQYSG--IVEEHLATRNAAGLFDVSHMGEITVEGK 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++++ + DV +L P K S E GG DDL++ E LV NA+ + D
Sbjct: 60 DALKFIDYLVTNDVTKLVPQKVMYSPMCYEHGGAVDDLLIYMHDESHFLLVVNAANKDKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ +F +D+ ++ IA+QGP + ILQ+ TD+ LS + F T +
Sbjct: 120 YQWIADKSKKFDVRVEDV------SDSYAQIALQGPKAEAILQKLTDVPLSDMKFYTFKD 173
Query: 377 -CTIAGIPCTLTRAGYTGEDGVEISV-PGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
++ G L+R GYTGEDG E+ + P + C+ I + LL DE + AGLGARD+L
Sbjct: 174 NASVGGARLLLSRTGYTGEDGFELYLSPADACS-IWDKLLEAGKDEGLLPAGLGARDTLR 232
Query: 432 GDITLN----------TPVPHG---SLKLSNDRFKSLGKDIHLQFLSPEERGL 471
+ L TP+ G +KL+ + F +GK + L +E+GL
Sbjct: 233 FEACLPLYGQELSEEITPLEAGLGFFVKLTKEDF--IGK---AKLLEQKEKGL 280
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRP-CTIAGIPCTLTRAGYTGEDGVEISV-PGE 529
IA+QGP + ILQ+ TD+ LS + F T + ++ G L+R GYTGEDG E+ + P +
Sbjct: 144 IALQGPKAEAILQKLTDVPLSDMKFYTFKDNASVGGARLLLSRTGYTGEDGFELYLSPAD 203
Query: 530 QCTHIVEALLS---DEDVKLAGLGARDSL 555
C+ I + LL DE + AGLGARD+L
Sbjct: 204 ACS-IWDKLLEAGKDEGLLPAGLGARDTL 231
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + + Q + G+ RK G GVP R GYE+ +R+G ITSG +P L+K
Sbjct: 266 FIGKAKLLEQKEKGLKRKIAGLEMVEKGVP-RHGYEV-RLQGKRIGTITSGSFAPYLEKY 323
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+A+ ++ Y+++G E++V +R K KV + PF K Y
Sbjct: 324 LALALLDMGYTEIGQEVYVDIRGKEKLAKVVETPFYKRRY 363
>gi|333983872|ref|YP_004513082.1| glycine cleavage system T protein [Methylomonas methanica MC09]
gi|333807913|gb|AEG00583.1| glycine cleavage system T protein [Methylomonas methanica MC09]
Length = 362
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 132/233 (56%), Gaps = 11/233 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLY LHL G KM FAG++MP+ Y A I HLH RS+ +FD+SHM Q ++ G+
Sbjct: 6 KTPLYGLHLELGAKMTAFAGYAMPLHY-ANGIIREHLHCRSQAGLFDISHMGQCLILGER 64
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E LE++ + EL G ++ TN GG+ DD+IV + ++ L L+ NA + D
Sbjct: 65 AAEVLENLTPGGIVELAIGAQKYTVLTNPAGGVIDDIIVAR-IDRGLSLIVNAGCK--DK 121
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
D AQ L + LQ E L+A+QGP ++ ++ R + + +L FM +
Sbjct: 122 DYAYLAQ----RLPDNCVLQI--RPELALLALQGPEAAVVMNRFSA-EAVALDFMQTCRT 174
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I GI C ++R+GYTGEDG EISV I LL++ V+ GLGARD+L
Sbjct: 175 RIDGIDCRISRSGYTGEDGFEISVRQTDAETIARLLLAEPCVEPIGLGARDTL 227
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
FPGA+ I S++ GV + R G G +P+R G + + Q+ G +TSG SPSL++ +
Sbjct: 262 FPGATKILSEL-DGVPQTRVGLLVVGKIPVREGCAVTDEQGQQQGIVTSGSFSPSLQRPV 320
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
AM I +K+G L+ +VR + + V V +PFV Y+
Sbjct: 321 AMALIHSDMAKIGKNLFAQVRGQSIAVTVAHLPFVPHRYH 360
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E L+A+QGP ++ ++ R + + +L FM + I GI C ++R+GYTGEDG EISV
Sbjct: 141 ELALLALQGPEAAVVMNRFSA-EAVALDFMQTCRTRIDGIDCRISRSGYTGEDGFEISVR 199
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
I LL++ V+ GLGARD+L
Sbjct: 200 QTDAETIARLLLAEPCVEPIGLGARDTL 227
>gi|261417713|ref|YP_003251395.1| glycine cleavage system aminomethyltransferase T [Geobacillus sp.
Y412MC61]
gi|319767478|ref|YP_004132979.1| glycine cleavage system protein T [Geobacillus sp. Y412MC52]
gi|261374170|gb|ACX76913.1| glycine cleavage system T protein [Geobacillus sp. Y412MC61]
gi|317112344|gb|ADU94836.1| glycine cleavage system T protein [Geobacillus sp. Y412MC52]
Length = 364
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 134/244 (54%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+ ++ +G K + F G+ MPVQ+ SI H R++ +FDVSHM + VV G+
Sbjct: 3 KRTPLFSVYARYGAKTIEFGGWEMPVQFS--SIKEEHEAVRTRAGLFDVSHMGEIVVRGR 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV +L PG+ +L E GG DDL++ + E+ LV NA+ + D
Sbjct: 61 GSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYLLVVNAANTEKD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
+ + D+ LQ +S+E L A+QGP + +LQR TD DL++L F +
Sbjct: 121 FAWLSG------HVEGDVELQDVSSETAQL-ALQGPAAERVLQRLTDFDLAALRPFSFAD 173
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSLSG 432
++G+ ++R GYTGEDG E+ E + EA+L+ + V GLGARD+L
Sbjct: 174 GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILAAGARDGVLPCGLGARDTLRF 233
Query: 433 DITL 436
+ L
Sbjct: 234 EACL 237
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGY 516
D+ LQ +S E L A+QGP + +LQR TD DL++L F + ++G+ ++R GY
Sbjct: 131 DVELQDVSSETAQL-ALQGPAAERVLQRLTDFDLAALRPFSFADGVEVSGVKALVSRTGY 189
Query: 517 TGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
TGEDG E+ E + EA+L+ + V GLGARD+L
Sbjct: 190 TGEDGFELYCKAEDAAALWEAILAAGARDGVLPCGLGARDTL 231
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G ++++ Q + G R+ G G+P R GY +F A+ + VG +T+G SP+LKKN
Sbjct: 267 FIGQAVLKRQKEEGPPRRIVGIEMIDRGIP-RHGYLVF-ADGEEVGFVTTGTQSPTLKKN 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I + ++ + +G E+ V +R KR+ + +PF +
Sbjct: 325 IGLALVKADVAAIGREVEVDIRGKRLKANIVPIPFYR 361
>gi|297529406|ref|YP_003670681.1| glycine cleavage system protein T [Geobacillus sp. C56-T3]
gi|297252658|gb|ADI26104.1| glycine cleavage system T protein [Geobacillus sp. C56-T3]
Length = 364
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 134/244 (54%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+ ++ +G K + F G+ MPVQ+ SI H R++ +FDVSHM + VV G+
Sbjct: 3 KRTPLFSVYARYGAKTIEFGGWEMPVQFS--SIKEEHEAVRTRAGLFDVSHMGEIVVRGR 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV +L PG+ +L E GG DDL++ + E+ LV NA+ + D
Sbjct: 61 GSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYLLVVNAANTEKD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
+ + D+ LQ +S+E L A+QGP + +LQR TD DL++L F +
Sbjct: 121 FAWLSG------HVEGDVELQDVSSETAQL-ALQGPAAERVLQRLTDFDLAALRPFSFAD 173
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSLSG 432
++G+ ++R GYTGEDG E+ E + EA+L+ + V GLGARD+L
Sbjct: 174 GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILAAGARDGVLPCGLGARDTLRF 233
Query: 433 DITL 436
+ L
Sbjct: 234 EACL 237
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGY 516
D+ LQ +S E L A+QGP + +LQR TD DL++L F + ++G+ ++R GY
Sbjct: 131 DVELQDVSSETAQL-ALQGPAAERVLQRLTDFDLAALRPFSFADGVEVSGVKALVSRTGY 189
Query: 517 TGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
TGEDG E+ E + EA+L+ + V GLGARD+L
Sbjct: 190 TGEDGFELYCKAEDAAALWEAILAAGARDGVLPCGLGARDTL 231
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G ++++ Q + G R+ G G+P R GY +F A+ + VG +T+G SP+LKKN
Sbjct: 267 FIGQAVLKRQKEEGPPRRLVGIEMIDRGIP-RHGYLVF-ADGEEVGFVTTGTQSPTLKKN 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I + ++ + +G E+ V +R KR+ + +PF +
Sbjct: 325 IGLALVKADVAAIGREVEVDIRGKRLKANIVPIPFYR 361
>gi|335429323|ref|ZP_08556221.1| glycine cleavage system aminomethyltransferase T [Haloplasma
contractile SSD-17B]
gi|334889333|gb|EGM27618.1| glycine cleavage system aminomethyltransferase T [Haloplasma
contractile SSD-17B]
Length = 368
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 12/244 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTP+Y+ H+ G K+V FA + MP+QY IT HL R+ V +FDVSHM + +VTG+
Sbjct: 5 KRTPIYEEHIKLGAKIVDFASWEMPIQYEG--ITDEHLTVRNHVGLFDVSHMGEILVTGQ 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++ + DV ++ + +L E GGI DDL+V + E+ LV NAS D
Sbjct: 63 EAIRFINKLVTNDVTKIKDNQVMYTLMCYEDGGIVDDLLVYRFNEEKFLLVVNASNIDQD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
D ++ A F+ ++ + G +A+QG + +L+ T +L + +F
Sbjct: 123 FDWILNAAKSFRVQVEN------QSNYYGQVAIQGKKAQAVLKEATKTNLDEIKFFYFLD 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED---VKLAGLGARDSLSG 432
I GI C ++R GYTGEDG EI +Q +I LL+ + +K GLGARD+L
Sbjct: 177 DVEINGIKCLVSRTGYTGEDGFEIYAKSDQIVNIWRTLLNVGEAFGIKPIGLGARDTLRF 236
Query: 433 DITL 436
+ +L
Sbjct: 237 EASL 240
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 470 GLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
G +A+QG + +L+ T +L + +F I GI C ++R GYTGEDG EI
Sbjct: 145 GQVAIQGKKAQAVLKEATKTNLDEIKFFYFLDDVEINGIKCLVSRTGYTGEDGFEIYAKS 204
Query: 529 EQCTHIVEALLSDED---VKLAGLGARDSL 555
+Q +I LL+ + +K GLGARD+L
Sbjct: 205 DQIVNIWRTLLNVGEAFGIKPIGLGARDTL 234
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G ++ Q + G++RK G G+P R GY + N ++ +G IT+G P +
Sbjct: 268 FIGRDALREQKEQGLTRKLVGLELHGKGIP-RHGYPVLNEAEEEIGVITTGYMLPGHENP 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+A+ I Y+ +G E+ +++R + VD KV F+ NY
Sbjct: 327 LALALININYTTLGEEIKIKIRKRLVDTKVVSKKFINKNY 366
>gi|74024930|ref|XP_829031.1| aminomethyltransferase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834417|gb|EAN79919.1| aminomethyltransferase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 375
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 135/244 (55%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ T L+ H+ +M PF+G+ MP+ Y A ++ HLHTR S+FDVSH V G
Sbjct: 6 RHTALHAFHVGRRARMAPFSGYDMPINYAAGAVR-EHLHTREAASIFDVSHFGVVEVFGA 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
RE++LE + + + GK L++F N++ G++DD IVT+ +D L +V NA +
Sbjct: 65 DREKFLEWLTPSAPSRMPSGKAALTMFLNDRAGVKDDCIVTR-YDDRLVVVVNAGCK--- 120
Query: 317 MDLMVA-AQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
D M+A + D+ L+ E+R ++ VQGP +++ L H + L L FM R
Sbjct: 121 -DKMIAYMRQSVADFTGDVALEM---EDRAIVTVQGPKAASALAPHVE-GLDKLLFMQGR 175
Query: 376 P-CTIAGIPC-TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGD 433
I G+ TLTR Y+GEDG +I + E IVE LL + DV+ AGL ARD+L +
Sbjct: 176 QDVDIRGMRIKTLTRCSYSGEDGFDIVMREEDALPIVELLLQNPDVQAAGLAARDTLRTE 235
Query: 434 ITLN 437
LN
Sbjct: 236 AGLN 239
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 464 LSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP-CTIAGIPC-TLTRAGYTGEDG 521
L E+R ++ VQGP +++ L H + L L FM R I G+ TLTR Y+GEDG
Sbjct: 140 LEMEDRAIVTVQGPKAASALAPHVE-GLDKLLFMQGRQDVDIRGMRIKTLTRCSYSGEDG 198
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+I + E IVE LL + DV+ AGL ARD+L
Sbjct: 199 FDIVMREEDALPIVELLLQNPDVQAAGLAARDTL 232
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSG---VSRKRTGFTST---GVPIRPGYEIF 56
+ +R + K R GGF G + +K V R R G + G R G +
Sbjct: 252 VAARCMWCVPKHRMTEGGFVGHERLAQLVKKAKELVPRVRVGILAAPERGPIPRNGTPVL 311
Query: 57 NANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
+ VG +TSG PSP+L +NIA+GY++ +YS +G ++ + VR K V ++ FV
Sbjct: 312 -VEGKCVGVVTSGVPSPTLGRNIALGYVDRSYSNIGQQVGLDVRGKLVKAEIVNSRFVAP 370
Query: 117 NYY 119
YY
Sbjct: 371 RYY 373
>gi|85374842|ref|YP_458904.1| glycine cleavage system aminomethyltransferase T [Erythrobacter
litoralis HTCC2594]
gi|84787925|gb|ABC64107.1| glycine cleavage system T protein [Erythrobacter litoralis
HTCC2594]
Length = 379
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 129/238 (54%), Gaps = 13/238 (5%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVS--ITASHLHTRSKVSVFDVSHMLQTVVTG 255
+ PL H + G +MVPFAG+ MP+QY S I A H TR S+FDVSHM Q V++G
Sbjct: 11 KLPLDAWHRAQGARMVPFAGYEMPIQYTGPSGGIVAEHNWTRESASLFDVSHMGQLVISG 70
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK-TLED--SLFLVSNASR 312
+ E LE++ + L PG +L NE GGI DDL+VT + ED +LV N +
Sbjct: 71 EGATEALEALVPGKLSSLKPGNIRYTLLLNEDGGILDDLMVTNMSREDVEEFYLVVNGAT 130
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+ D+ A R + L +I + L RGL+A+QGP ++ L+ L FM
Sbjct: 131 KWDDI-----AHLR-EHLPDEITMNHLDG--RGLVALQGPKAAEALETVFPGVAERLVFM 182
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G + R GYTGEDG EI++ + EAL++D+ V+ AGLGARDSL
Sbjct: 183 QGTGFEWRGDMIGVARCGYTGEDGFEINISASHIEQLAEALVADDRVRPAGLGARDSL 240
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
K RRETGG+ G I + SG KR G G +P R G ++ D +G +TSG
Sbjct: 270 KSRRETGGWMGHGRIAQALMSGPETKRVGLKIEGRMPAREGALVY-IGDAEIGRVTSGGF 328
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L IAM YI + G E+ + VR+KR+ V MPFV YY
Sbjct: 329 SPTLGYPIAMAYIAREQAIEGTEVEIEVRNKRLPATVVPMPFVPHRYY 376
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%)
Query: 469 RGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPG 528
RGL+A+QGP ++ L+ L FM G + R GYTGEDG EI++
Sbjct: 154 RGLVALQGPKAAEALETVFPGVAERLVFMQGTGFEWRGDMIGVARCGYTGEDGFEINISA 213
Query: 529 EQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EAL++D+ V+ AGLGARDSL
Sbjct: 214 SHIEQLAEALVADDRVRPAGLGARDSL 240
>gi|221632760|ref|YP_002521982.1| glycine cleavage system T protein [Thermomicrobium roseum DSM 5159]
gi|221155637|gb|ACM04764.1| glycine cleavage system T protein [Thermomicrobium roseum DSM 5159]
Length = 375
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 11/241 (4%)
Query: 195 AEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVT 254
A + TPLY+ H S G + + FAG+ MPVQY I HL RS+ +FD+ HM Q VV
Sbjct: 2 AAKVTPLYERHRSLGARFIEFAGWLMPVQY--TGIVDEHLAVRSRAGLFDLGHMGQVVVR 59
Query: 255 GKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVS-NASRR 313
G + +L+ + DV L PG+ S+ GG+ DD+++ + + +LV NA+
Sbjct: 60 GSDAQAFLQWLTPNDVAALRPGRAQYSMLLYPHGGVVDDIMIYRRPDREEYLVVVNAANT 119
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ D+ ++ + R + + + ++ +SA G++A+QGP S ILQR T DLS++
Sbjct: 120 EKDVAWLL--EHRAERVEWRVEIEDVSAST-GMLALQGPRSEAILQRLTPADLSAVQSFD 176
Query: 374 SRPCTIAGIPCTLTRAGYTGEDGVEISVP----GEQCTHIVEALLSDEDVKLAGLGARDS 429
+ T+AG+P + R GYTGEDG E+ P G+ ++EA SD V + GLGARD+
Sbjct: 177 AIVSTVAGVPTLIARTGYTGEDGFELYFPIDHVGDLWDRLLEAGESDGIVPV-GLGARDT 235
Query: 430 L 430
L
Sbjct: 236 L 236
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 470 GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP-- 527
G++A+QGP S ILQR T DLS++ + T+AG+P + R GYTGEDG E+ P
Sbjct: 148 GMLALQGPRSEAILQRLTPADLSAVQSFDAIVSTVAGVPTLIARTGYTGEDGFELYFPID 207
Query: 528 --GEQCTHIVEALLSDEDVKLAGLGARDSL 555
G+ ++EA SD V + GLGARD+L
Sbjct: 208 HVGDLWDRLLEAGESDGIVPV-GLGARDTL 236
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 17 ETGGFPGASIIQSQIKSGVSRKRTGFT---STGVPIRPGYEIFNANDQRVGAITSGCPSP 73
+ G F G ++ Q + G R+ GF G+P R GYE+ +RVG +TSG SP
Sbjct: 267 DKGPFIGREALERQRQEGPPRRLVGFELVERGGIP-RTGYEV-RQEGERVGYVTSGTNSP 324
Query: 74 SLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ K I + ++ + +G EL V +R + V + PF +
Sbjct: 325 TFGKPIGLALVDRRAAGIGRELSVVIRGRDVRAVQVRTPFYR 366
>gi|423083610|ref|ZP_17072140.1| aminomethyltransferase [Clostridium difficile 002-P50-2011]
gi|423088340|ref|ZP_17076723.1| aminomethyltransferase [Clostridium difficile 050-P50-2011]
gi|357542912|gb|EHJ24947.1| aminomethyltransferase [Clostridium difficile 050-P50-2011]
gi|357544370|gb|EHJ26374.1| aminomethyltransferase [Clostridium difficile 002-P50-2011]
Length = 824
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 132/243 (54%), Gaps = 11/243 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R LY++H G K+V FAG+ MP++Y I H R +FDVSHM + + G
Sbjct: 5 KRVSLYNIHKELGAKLVEFAGWEMPLEYEG--INKEHEMVRKSAGIFDVSHMGEVQIKGV 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E++++++ D+ L+ + E GG+ DDL++ K E+ LV NA D
Sbjct: 63 ESEKFIQNLVTNDISTLNINDIIYTPMCYENGGVVDDLLIYKFGEEEYLLVINAGNIDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ ++ +S G ++ ++ +S+E L A+QGP + ILQ+ TD+DL+S+ F S P
Sbjct: 123 VAWIIK-----QSEGYNVDIKNISSEVSQL-AIQGPKAEEILQKITDIDLNSIKFYKSIP 176
Query: 377 CT-IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSLSGD 433
T + G PC ++R GYTGEDG EI + I +L ED+ AGLG RD+L +
Sbjct: 177 STKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTLRFE 236
Query: 434 ITL 436
L
Sbjct: 237 AAL 239
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT-IAGIPCTL 511
+S G ++ ++ +S E L A+QGP + ILQ+ TD+DL+S+ F S P T + G PC +
Sbjct: 129 QSEGYNVDIKNISSEVSQL-AIQGPKAEEILQKITDIDLNSIKFYKSIPSTKVCGCPCLV 187
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 555
+R GYTGEDG EI + I +L ED+ AGLG RD+L
Sbjct: 188 SRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTL 233
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G SI+ + +SG RK GF G + R GY+I D+ VG +T+GC SP+ K +
Sbjct: 268 FIGKSILSKEKESGAKRKLVGFEMQGKGMPRNGYDI-RIGDKIVGFVTTGCASPTTGKIL 326
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
MG I+ Y+KVG E+ + +R K V + K PF K Y
Sbjct: 327 GMGIIDSEYAKVGNEIGIAIRKKVVPAVIVKKPFYKKQY 365
>gi|304317374|ref|YP_003852519.1| glycine cleavage system protein T [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778876|gb|ADL69435.1| glycine cleavage system T protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 367
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ HL +G KM+ FAGF+MPVQY SI H R +FDVSHM + ++ GK
Sbjct: 6 KKTPLYETHLKYGAKMIDFAGFAMPVQYE--SILKEHEAVRKSAGLFDVSHMGELIIEGK 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ I ++ ++ + S G DDL+V K + LV NAS D
Sbjct: 64 DSEKFINYIISNNIAKISDNQAMYSPMCYANGTTVDDLLVYKFSNEKYMLVVNASNIDKD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + + + K+I + E +A+QGP + ILQ+ T+ +L + +
Sbjct: 124 YNWIFENKSGYNIAVKNI------SNEVSELALQGPKAQEILQKTTEYNLDDMKYYHFDK 177
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+AG+ C ++R GYTGEDG EI + + + E +L+ + +K AGLGARD+L
Sbjct: 178 INLAGVNCLISRTGYTGEDGFEIFLRNDYAQSMWEKILAVGEEFGIKPAGLGARDTL 234
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
G +I ++ +S E L A+QGP + ILQ+ T+ +L + + +AG+ C ++R G
Sbjct: 133 GYNIAVKNISNEVSEL-ALQGPKAQEILQKTTEYNLDDMKYYHFDKINLAGVNCLISRTG 191
Query: 516 YTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
YTGEDG EI + + + E +L+ + +K AGLGARD+L
Sbjct: 192 YTGEDGFEIFLRNDYAQSMWEKILAVGEEFGIKPAGLGARDTL 234
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 20 GFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKK 77
F G + Q + G+ RK GF G+P R GY++ A +++G +T+G SP+LKK
Sbjct: 267 AFIGRDALFKQKQDGLKRKIVGFEMIENGIP-RHGYDVC-AQGEKIGYVTTGYLSPTLKK 324
Query: 78 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVT 109
NI M I ++ +G E+ + +R+K + VT
Sbjct: 325 NIGMALISSKFANIGNEISIIIRNKPLKAIVT 356
>gi|255100785|ref|ZP_05329762.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-63q42]
gi|255306669|ref|ZP_05350840.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile ATCC 43255]
gi|423091645|ref|ZP_17079766.1| aminomethyltransferase [Clostridium difficile 70-100-2010]
gi|357554852|gb|EHJ36551.1| aminomethyltransferase [Clostridium difficile 70-100-2010]
Length = 824
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 131/243 (53%), Gaps = 11/243 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R LY++H G K+V FAG+ MP++Y I H R +FDVSHM + + G
Sbjct: 5 KRVSLYNIHKELGAKLVEFAGWEMPLEYEG--INKEHEKVRKSAGIFDVSHMGEVQIKGA 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E++++++ D+ L + E GG+ DDL++ K E+ LV NA D
Sbjct: 63 ESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYLLVINAGNIDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ ++ +S G ++ ++ +S+E L A+QGP + ILQ+ TD+DL+S+ F S P
Sbjct: 123 VAWIIK-----QSEGYNVDIKNISSEVSQL-AIQGPKAEEILQKITDIDLNSIKFYKSIP 176
Query: 377 CT-IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSLSGD 433
T + G PC ++R GYTGEDG EI + I +L ED+ AGLG RD+L +
Sbjct: 177 STKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTLRFE 236
Query: 434 ITL 436
L
Sbjct: 237 AAL 239
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT-IAGIPCTL 511
+S G ++ ++ +S E L A+QGP + ILQ+ TD+DL+S+ F S P T + G PC +
Sbjct: 129 QSEGYNVDIKNISSEVSQL-AIQGPKAEEILQKITDIDLNSIKFYKSIPSTKVCGCPCLV 187
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 555
+R GYTGEDG EI + I +L ED+ AGLG RD+L
Sbjct: 188 SRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTL 233
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G SI+ + +SG RK GF G + R GY+I D+ VG +T+GC SP+ K +
Sbjct: 268 FIGKSILSKEKESGAKRKLVGFEMQGKGMPRNGYDI-RIGDKTVGFVTTGCASPTTGKIL 326
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
MG I+ Y+KVG E+ + +R K V + K PF K Y
Sbjct: 327 GMGIIDSEYAKVGNEIGIAIRKKVVPAVIVKKPFYKKQY 365
>gi|433542442|ref|ZP_20498869.1| aminomethyltransferase [Brevibacillus agri BAB-2500]
gi|432186253|gb|ELK43727.1| aminomethyltransferase [Brevibacillus agri BAB-2500]
Length = 367
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 132/238 (55%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+D + +G K + F G+ +PVQ+ SI H R+K +FDVSHM + V G+
Sbjct: 5 KRTPLFDSYAKYGAKTIDFGGWELPVQFS--SIGQEHEAVRTKAGLFDVSHMGEVDVKGE 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+L+ + DV +L G+ S+ GG DDL+V K +D LV NA +D
Sbjct: 63 SALEYLQRVTTNDVSKLAVGQAQYSVLCYPDGGTVDDLLVYKYADDHYLLVINAGN--ID 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
D + L + ++ +S + IA+QGPL+ +ILQ+ T DLS + +F R
Sbjct: 121 KDFAWLEE----HLIPGVTIENISP-QTAQIAIQGPLAESILQKLTATDLSKIGFFRFER 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKL-AGLGARDSL 430
+AGI ++R GYTGEDG EI +P E+ + +ALL ED L GLGARD+L
Sbjct: 176 DVEVAGISALVSRTGYTGEDGFEIYLPAERAAELWDALLEAGKEDGLLPCGLGARDTL 233
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYT 517
+ ++ +SP+ IA+QGPL+ +ILQ+ T DLS + +F R +AGI ++R GYT
Sbjct: 134 VTIENISPQ-TAQIAIQGPLAESILQKLTATDLSKIGFFRFERDVEVAGISALVSRTGYT 192
Query: 518 GEDGVEISVPGEQCTHIVEALLS--DEDVKL-AGLGARDSL 555
GEDG EI +P E+ + +ALL ED L GLGARD+L
Sbjct: 193 GEDGFEIYLPAERAAELWDALLEAGKEDGLLPCGLGARDTL 233
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G ++++Q ++G RK G G+P R Y ++ ++ VG +T+G SP+LKKN
Sbjct: 269 FIGQEVLKAQKENGAPRKLVGIEMIDRGIP-RTHYPVY-VGEELVGEVTTGTQSPTLKKN 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ + ++ ++ +G +L V +R KR+ +V PF K
Sbjct: 327 VGLALVKSEHAALGTQLEVEIRGKRLKAEVVAAPFYK 363
>gi|395774420|ref|ZP_10454935.1| glycine cleavage system aminomethyltransferase T [Streptomyces
acidiscabies 84-104]
Length = 370
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 123/240 (51%), Gaps = 9/240 (3%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS + +RT L LH S G M FAG+ MP++YG S H R++ +FD+SHM +
Sbjct: 3 SSSAVPRRTALDALHRSLGATMTDFAGWDMPLRYG--SEREEHTAVRTRAGLFDLSHMGE 60
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
VTG L V D+ + G+ ++ GGI DDLIV + E +V+NA
Sbjct: 61 ITVTGPEAAALLNYALVGDLAAVKVGRARYTMICRADGGILDDLIVYRLAETEFMVVANA 120
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
S +V +D + F +L +D + LIAVQGP +S +L TD DL+ L
Sbjct: 121 SNAQVVLDALTERAAGFDALVRDDRDAY------ALIAVQGPEASAVLGALTDADLAGLK 174
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ P T+AG+P + R GYTGEDG E+ V + EAL + V GL RD+L
Sbjct: 175 YYAGLPGTVAGVPALIARTGYTGEDGFELFVAPSDAVALWEALAAQGPVPC-GLSCRDTL 233
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
LIAVQGP +S +L TD DL+ L + P T+AG+P + R GYTGEDG E+ V
Sbjct: 150 LIAVQGPEASAVLGALTDADLAGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVAPSD 209
Query: 531 CTHIVEALLSDEDVKLAGLGARDSL 555
+ EAL + V GL RD+L
Sbjct: 210 AVALWEALAAQGPVPC-GLSCRDTL 233
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37 RKRTGFTSTG--VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE 94
R G + G VP R GYE+ A +G +TSG PSP+L K IAM Y++ A++ G +
Sbjct: 288 RVLVGLVAAGRRVP-RAGYEVV-AGGAVIGEVTSGAPSPTLGKPIAMAYVDAAHAAPGTD 345
Query: 95 -LWVRVRDKRVDVKVTKMPFVK 115
+ V +R +V +PF K
Sbjct: 346 GVGVDIRGSHEAYEVVALPFYK 367
>gi|182415175|ref|YP_001820241.1| glycine cleavage system T protein [Opitutus terrae PB90-1]
gi|177842389|gb|ACB76641.1| glycine cleavage system T protein [Opitutus terrae PB90-1]
Length = 369
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL D H +HG ++V FAG+ MPVQY SI H R +FDVSHM + V G
Sbjct: 5 KRTPLRDFHAAHGARLVDFAGWEMPVQY--RSILEEHKAVRRTAGLFDVSHMGEVDVHGP 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L + DV +L PG+ S GG+ DDL+V + FL NAS D
Sbjct: 63 DAARFLNRLVTNDVAKLFPGRVLYSPMCYPNGGVVDDLLVYMREPNRYFLCVNASNVAKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ M R ++ G D+ + S ++ L+AVQGP ++ I+Q T L +L +
Sbjct: 123 LAWM-----REQASGFDVTITDRS-DDYALLAVQGPAAAAIVQSLTGAKLGALGYYHFGE 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
T+AG+ C ++R GYTGEDG E+ + EALL + ++LAGLGARDSL
Sbjct: 177 GTVAGVQCLISRTGYTGEDGFELYHAPADAVTLAEALLRAGAPHGLELAGLGARDSL 233
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++ L+AVQGP ++ I+Q T L +L + T+AG+ C ++R GYTGEDG E+
Sbjct: 142 DDYALLAVQGPAAAAIVQSLTGAKLGALGYYHFGEGTVAGVQCLISRTGYTGEDGFELYH 201
Query: 527 PGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
+ EALL + ++LAGLGARDSL
Sbjct: 202 APADAVTLAEALLRAGAPHGLELAGLGARDSL 233
>gi|254975289|ref|ZP_05271761.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-66c26]
gi|255092679|ref|ZP_05322157.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile CIP 107932]
gi|255314416|ref|ZP_05355999.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-76w55]
gi|255517094|ref|ZP_05384770.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-97b34]
gi|255650198|ref|ZP_05397100.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-37x79]
gi|260683322|ref|YP_003214607.1| bi-functional glycine dehydrogenase/aminomethyl transferase protein
[Clostridium difficile CD196]
gi|260686918|ref|YP_003218051.1| bifunctional glycine dehydrogenase/aminomethyl transferase protein
[Clostridium difficile R20291]
gi|306520184|ref|ZP_07406531.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-32g58]
gi|384360931|ref|YP_006198783.1| bifunctional glycine dehydrogenase/aminomethyl transferase protein
[Clostridium difficile BI1]
gi|260209485|emb|CBA63027.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile CD196]
gi|260212934|emb|CBE04200.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile R20291]
Length = 824
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 131/243 (53%), Gaps = 11/243 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R LY++H G K+V FAG+ MP++Y I H R +FDVSHM + + G
Sbjct: 5 KRVSLYNIHKELGAKLVEFAGWEMPLEYEG--INKEHEKVRKSAGIFDVSHMGEVQIKGA 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E++++++ D+ L + E GG+ DDL++ K E+ LV NA D
Sbjct: 63 ESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYLLVINAGNIDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ ++ +S G ++ ++ +S+E L A+QGP + ILQ+ TD+DL+S+ F S P
Sbjct: 123 VAWIIK-----QSEGYNVDIKNISSEVSQL-AIQGPKAEEILQKITDIDLNSIKFYKSIP 176
Query: 377 CT-IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSLSGD 433
T + G PC ++R GYTGEDG EI + I +L ED+ AGLG RD+L +
Sbjct: 177 STKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTLRFE 236
Query: 434 ITL 436
L
Sbjct: 237 AAL 239
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT-IAGIPCTL 511
+S G ++ ++ +S E L A+QGP + ILQ+ TD+DL+S+ F S P T + G PC +
Sbjct: 129 QSEGYNVDIKNISSEVSQL-AIQGPKAEEILQKITDIDLNSIKFYKSIPSTKVCGCPCLV 187
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSL 555
+R GYTGEDG EI + I +L ED+ AGLG RD+L
Sbjct: 188 SRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTL 233
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G SI+ + +SG RK GF G + R GY+I D+ VG +T+GC SP+ K +
Sbjct: 268 FIGKSILSKEKESGAKRKLVGFEMQGKGMPRNGYDI-RIGDKTVGFVTTGCASPTTGKIL 326
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
MG I+ Y+KVG E+ + +R K V + K PF K Y
Sbjct: 327 GMGIIDSEYAKVGNEIGIAIRKKVVPAVIVKKPFYKKQY 365
>gi|149277085|ref|ZP_01883227.1| glycine cleavage system aminomethyltransferase T [Pedobacter sp.
BAL39]
gi|149231962|gb|EDM37339.1| glycine cleavage system aminomethyltransferase T [Pedobacter sp.
BAL39]
Length = 359
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ T L D H+S G KMVPFAG++MPVQY I A H RS V VFDVSHM + ++ G+
Sbjct: 2 KNTALTDKHISLGAKMVPFAGYNMPVQYEG--INAEHAVVRSAVGVFDVSHMGEFILKGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ + ++ + D +L GK S NE GGI DDL+V + E + LV NAS + D
Sbjct: 60 NALDLIQRVTSNDASKLYDGKVQYSCLPNEDGGIVDDLLVYRIDELTYMLVVNASNIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + D+ G ++H +++ L+A+QGP ++ LQ T++DL+S+ + +
Sbjct: 120 WNWIQKYNDK----GVEMH---NISDKTSLLAIQGPKAAEALQSLTEVDLASMEYYSFTK 172
Query: 377 CTIAGIPCTLTRA-GYTGEDGVEISVPGEQCTHIVEALLSDE---DVKLAGLGARDSL 430
T AG+ + A GYTG G EI E I EA+ + ++K GLGARD+L
Sbjct: 173 GTFAGVGNVVISATGYTGAGGFEIYFDNEHANEIWEAIFAAGAALNIKPIGLGARDTL 230
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F + +Q+Q ++GVSRK GF G+P R YEI +A Q +G +TSG +PSL+K
Sbjct: 264 FTNSEALQAQKEAGVSRKLIGFEMIDRGIP-RHDYEIVDAEGQVIGRVTSGTQAPSLQKA 322
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I MGYI+ A++K G E+++ +R+ R+ KV K PF K
Sbjct: 323 IGMGYIDKAFAKEGTEIFINIRNSRIKAKVVKFPFYK 359
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRA-GYTGEDGVEISVPGE 529
L+A+QGP ++ LQ T++DL+S+ + + T AG+ + A GYTG G EI E
Sbjct: 142 LLAIQGPKAAEALQSLTEVDLASMEYYSFTKGTFAGVGNVVISATGYTGAGGFEIYFDNE 201
Query: 530 QCTHIVEALLSDE---DVKLAGLGARDSL 555
I EA+ + ++K GLGARD+L
Sbjct: 202 HANEIWEAIFAAGAALNIKPIGLGARDTL 230
>gi|422409565|ref|ZP_16486526.1| glycine cleavage system T protein [Listeria monocytogenes FSL
F2-208]
gi|313608964|gb|EFR84713.1| glycine cleavage system T protein [Listeria monocytogenes FSL
F2-208]
Length = 369
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 130/234 (55%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 13 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVEGPD 70
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 71 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTAKDF 130
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 131 EWMV------KNIQGDVSVTNVSL-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 183
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI + + EA+L+ E V GLGARD+L
Sbjct: 184 ADVAGVKTIISRSGYTGEDGFEIYMQSADAGKVFEAILA-EGVAPIGLGARDTL 236
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 149 EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYM 208
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EA+L+ E V GLGARD+L
Sbjct: 209 QSADAGKVFEAILA-EGVAPIGLGARDTL 236
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F ND+ +G
Sbjct: 260 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNDEEIGI 316
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 317 VTSGTQSPTLGTNIGLALIDTAYTELGQEVEVGIRNKKIKAKIVPTPFYK 366
>gi|255655674|ref|ZP_05401083.1| putative bi-functional glycine dehydrogenase/aminomethyl
transferase protein [Clostridium difficile QCD-23m63]
gi|296451676|ref|ZP_06893409.1| glycine dehydrogenase [Clostridium difficile NAP08]
gi|296878920|ref|ZP_06902920.1| glycine dehydrogenase [Clostridium difficile NAP07]
gi|296259507|gb|EFH06369.1| glycine dehydrogenase [Clostridium difficile NAP08]
gi|296430192|gb|EFH16039.1| glycine dehydrogenase [Clostridium difficile NAP07]
Length = 824
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 131/243 (53%), Gaps = 11/243 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R LY++H G K+V FAG+ MP++Y I H R +FDVSHM + + G
Sbjct: 5 KRVSLYNIHKELGAKLVEFAGWEMPLEYEG--INKEHDMVRKSAGIFDVSHMGEVQIKGV 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E++++++ D+ L+ + E GG+ DDL++ K E+ LV NA D
Sbjct: 63 ESEKFIQNLVTNDISTLNINDIIYTPMCYENGGVVDDLLIYKFGEEDYLLVINAGNIDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ ++ +R+ ++ ++ +S+E L A+QGP + ILQ+ TD+DL+S+ F S P
Sbjct: 123 VAWIIKQSERY-----NVDIKNISSEVSQL-AIQGPKAEEILQKITDIDLNSIKFYKSIP 176
Query: 377 CT-IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKLAGLGARDSLSGD 433
+ G PC ++R GYTGEDG EI + I +L ED+ AGLG RD+L +
Sbjct: 177 SVKVCGCPCLVSRTGYTGEDGFEIYCENKYAEIIWNEVLKVGGEDICPAGLGCRDTLRFE 236
Query: 434 ITL 436
L
Sbjct: 237 AAL 239
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT-IAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + ILQ+ TD+DL+S+ F S P + G PC ++R GYTGEDG EI +
Sbjct: 147 LAIQGPKAEEILQKITDIDLNSIKFYKSIPSVKVCGCPCLVSRTGYTGEDGFEIYCENKY 206
Query: 531 CTHIVEALLS--DEDVKLAGLGARDSL 555
I +L ED+ AGLG RD+L
Sbjct: 207 AEIIWNEVLKVGGEDICPAGLGCRDTL 233
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G SI+ + ++G RK GF G + R GY+I D+ VG +T+GC SP+ K +
Sbjct: 268 FIGKSILSKEKENGAKRKLVGFEMQGKGMPRNGYDI-RIGDKIVGFVTTGCASPTTGKIL 326
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
MG I+ Y+KVG E+ + +R K V + K PF K Y
Sbjct: 327 GMGIIDSEYAKVGNEIGIAIRKKVVPAVIAKKPFYKKQY 365
>gi|421835344|ref|ZP_16270135.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum CFSAN001627]
gi|409743034|gb|EKN42176.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum CFSAN001627]
Length = 370
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 132/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGIFDVSHMGEVMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + ++ +A+QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMDHKGDF-----DVEI-VDESDSIAQLALQGPLAEEILQKIVDIDLQEIKFFKLKRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LALQGPLAEEILQKIVDIDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKGLWHAILNAGKEEGAQPIGLGARDTL 234
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKEL 353
>gi|359407025|ref|ZP_09199661.1| aminomethyltransferase [Prevotella stercorea DSM 18206]
gi|357553773|gb|EHJ35511.1| aminomethyltransferase [Prevotella stercorea DSM 18206]
Length = 362
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 124/241 (51%), Gaps = 8/241 (3%)
Query: 196 EQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG 255
E++T LYD H++ G M PF GF MP+QY +IT H R VFDVSHM + V G
Sbjct: 2 EKKTCLYDKHVALGALMQPFGGFIMPIQYS--NITDEHNTVRQHCGVFDVSHMGEVTVKG 59
Query: 256 KHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
E ++ I DV +PGK + E GG DDL+V K E+ FLV NA+
Sbjct: 60 PDAERYVSHIFTNDVRGAEPGKIFYGMMCYENGGTVDDLLVYKMAENDFFLVINAANIDK 119
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
D++ M + + F D+ + S E G +AVQGP + +++ L+ L F T++
Sbjct: 120 DVEWMKSHLEGF-----DVEFENRS-EYYGQLAVQGPEAEQVVEEVLGLECKDLVFYTTK 173
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
+AG ++R GYTGEDG EI + L++ K GLG RD+L ++
Sbjct: 174 TIDVAGETVIISRTGYTGEDGFEIYASHAFINEQWDKLMASGRCKPCGLGCRDTLRFEVG 233
Query: 436 L 436
L
Sbjct: 234 L 234
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAG 515
G D+ + S E G +AVQGP + +++ L+ L F T++ +AG ++R G
Sbjct: 130 GFDVEFENRS-EYYGQLAVQGPEAEQVVEEVLGLECKDLVFYTTKTIDVAGETVIISRTG 188
Query: 516 YTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
YTGEDG EI + L++ K GLG RD+L
Sbjct: 189 YTGEDGFEIYASHAFINEQWDKLMASGRCKPCGLGCRDTL 228
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + +Q GV +K G + I R GY++ + ++ +G +T+G + S K++
Sbjct: 263 FIGKEALAAQKAEGVKQKVVGIELSDRAIPRHGYKVLHEGEE-IGEVTTGYHTISSDKSV 321
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
M I+ ++K+G EL +++R K V K F +Y
Sbjct: 322 CMALIDARFAKLGTELEIQIRKKTFPGVVVKKKFYDKHY 360
>gi|239906460|ref|YP_002953201.1| aminomethyltransferase [Desulfovibrio magneticus RS-1]
gi|239796326|dbj|BAH75315.1| aminomethyltransferase [Desulfovibrio magneticus RS-1]
Length = 362
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 120/235 (51%), Gaps = 15/235 (6%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL D + HG KMVPFAGF MPVQY SI A H TR+K +VFD+ HM + ++G
Sbjct: 7 TPLTDWNREHGAKMVPFAGFDMPVQY--TSILAEHEQTRNKAAVFDICHMGEFTLSGDGA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ L D+ L PGK NE GG+ DDLI+ D LV N SR VD +
Sbjct: 65 AQALGKAVTHDLATLAPGKCRYGFLLNENGGVIDDLIIYCLGVDDYMLVVNGSRIVVDFE 124
Query: 319 LM---VAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ + A F+++ + E I +QGPL+ +L+ D S L +
Sbjct: 125 TIKGRLPAGSNFRNV----------SAETAKIDLQGPLAFEVLRDRLPGDFSGLKYFNFV 174
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G+ ++R GYTGE G E+ +P + EA+ +D V AGLGARD++
Sbjct: 175 WTDFQGVKMMVSRTGYTGELGYELFLPASHAVALWEAITADPRVAPAGLGARDTI 229
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
E I +QGPL+ +L+ D S L + G+ ++R GYTGE G E+ +P
Sbjct: 142 ETAKIDLQGPLAFEVLRDRLPGDFSGLKYFNFVWTDFQGVKMMVSRTGYTGELGYELFLP 201
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EA+ +D V AGLGARD++
Sbjct: 202 ASHAVALWEAITADPRVAPAGLGARDTI 229
>gi|389696943|ref|ZP_10184585.1| glycine cleavage system T protein [Microvirga sp. WSM3557]
gi|388585749|gb|EIM26044.1| glycine cleavage system T protein [Microvirga sp. WSM3557]
Length = 382
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 131/242 (54%), Gaps = 19/242 (7%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPL+ H++ G +MVPFAG+ MPVQY I H TR +FDVSHM Q +
Sbjct: 13 QTPLHAEHVALGARMVPFAGYDMPVQY-PTGILTEHNWTREHAGLFDVSHMGQAFLVADD 71
Query: 258 REE-----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKT----LEDSLFLVS 308
+ +E++ ADV L P + S E GGI DDL+VT+ E L+LV
Sbjct: 72 KSHETVARAIEALIPADVLNLKPNQQRYSQLLAEDGGILDDLMVTRVGAPGHEGWLYLVV 131
Query: 309 NASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSS 368
NAS ++ D + A L K + L+ ++ GL+A+QGP + +L R + +
Sbjct: 132 NASMKEQDYAHIEA------RLPKGVALR--RKDDLGLMALQGPSAEAVLARLVP-EAAG 182
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 428
L FM S I I C ++R+GYTGEDG EIS G+ + LL+D +VK GLGARD
Sbjct: 183 LAFMMSADVQIDAIWCHVSRSGYTGEDGFEISCQGKDAPALWNKLLADPEVKAIGLGARD 242
Query: 429 SL 430
SL
Sbjct: 243 SL 244
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPGA +Q +IK G +R R G G P R G I + VG +TSG
Sbjct: 274 KRRREEGGFPGAERVQREIKDGAARVRVGIRPEGRAPAREGTIITTPDGHEVGIVTSGGF 333
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
P++ +AMGY+ S VG +L + VR K + KV MPF Y
Sbjct: 334 GPTVNGPVAMGYVAKEVSAVGTDLHLIVRGKPLPAKVAAMPFAPHRY 380
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++ GL+A+QGP + +L R + + L FM S I I C ++R+GYTGEDG EIS
Sbjct: 157 DDLGLMALQGPSAEAVLARLVP-EAAGLAFMMSADVQIDAIWCHVSRSGYTGEDGFEISC 215
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
G+ + LL+D +VK GLGARDSL
Sbjct: 216 QGKDAPALWNKLLADPEVKAIGLGARDSL 244
>gi|365874830|ref|ZP_09414362.1| glycine cleavage system aminomethyltransferase T [Elizabethkingia
anophelis Ag1]
gi|442588941|ref|ZP_21007750.1| glycine cleavage system aminomethyltransferase T [Elizabethkingia
anophelis R26]
gi|365757603|gb|EHM99510.1| glycine cleavage system aminomethyltransferase T [Elizabethkingia
anophelis Ag1]
gi|442561179|gb|ELR78405.1| glycine cleavage system aminomethyltransferase T [Elizabethkingia
anophelis R26]
Length = 358
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 129/238 (54%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L+D H+S G K+VPFAGF MPVQY V T H R K +FDVSHM Q + G
Sbjct: 2 KRTALFDKHVSLGAKIVPFAGFEMPVQYSGV--TEEHFAVREKAGMFDVSHMGQFFIEGP 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+E L+ + +V L+ GK S NE GGI DDLIV K ++ F+V NAS D
Sbjct: 60 GSKELLQKVTTNNVDALEDGKAQYSCLPNENGGIVDDLIVYKIADEKYFVVVNASNIDKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + ++ + G + ++++ LIA+QGP ++ ILQ+ TD L+ + +
Sbjct: 120 WNHI----SKYNTFGAKMT---NASDDMSLIAIQGPKATEILQKLTDTQLADIPYYNFTI 172
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALL-SDEDVKL--AGLGARDSL 430
+AG+ ++ GYTG G EI + + +AL + E+ + GL +RD+L
Sbjct: 173 GAVAGVQDVIISNTGYTGSGGFEIYFKNDNAVKLWDALTEAGEEFGMIPCGLASRDTL 230
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F + Q + G++RK GF I R YE+ +A +G +TSG SP K +
Sbjct: 264 FVSKEVFAKQKEEGITRKLVGFEMQEKAIPRHDYEVVDAEGNVIGKVTSGTMSPMKKIGV 323
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFV 114
+ Y+ + K+G ++++R+R+K + KV K+PFV
Sbjct: 324 GLAYVAKPHFKLGSDIFIRIRNKDIPAKVVKLPFV 358
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVE 523
+ ++ LIA+QGP ++ ILQ+ TD L+ + + +AG+ ++ GYTG G E
Sbjct: 136 ASDDMSLIAIQGPKATEILQKLTDTQLADIPYYNFTIGAVAGVQDVIISNTGYTGSGGFE 195
Query: 524 ISVPGEQCTHIVEALL-SDEDVKL--AGLGARDSL 555
I + + +AL + E+ + GL +RD+L
Sbjct: 196 IYFKNDNAVKLWDALTEAGEEFGMIPCGLASRDTL 230
>gi|254293417|ref|YP_003059440.1| glycine cleavage system protein T [Hirschia baltica ATCC 49814]
gi|254041948|gb|ACT58743.1| glycine cleavage system T protein [Hirschia baltica ATCC 49814]
Length = 403
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 133/251 (52%), Gaps = 30/251 (11%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHM---------- 248
TPL L+ S GGKMV FAG+SMP+Q+ + I H H R K +FDVSHM
Sbjct: 25 TPLSKLNHSMGGKMVDFAGYSMPIQFDS-GIIPEHHHVREKCGLFDVSHMGPAFLKLEEM 83
Query: 249 -LQTVVTGKHREEWL----ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTL--- 300
+T +TG + E + D+ L PG+ +L N+ GGI DDL+VT+
Sbjct: 84 GSETALTGDAAHAKIAGIFEQLVCGDIAGLAPGEMRYTLLLNDDGGILDDLMVTRPFAPE 143
Query: 301 -EDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ 359
+ L++V NA ++ D L+ K G + A++ LIAVQGPL+ ++
Sbjct: 144 EQGCLYIVVNAGCKEEDFALISE-----KCEGAVLE----RADDNALIAVQGPLTRKLMA 194
Query: 360 RHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDV 419
++ L+ + FMT++ + G+ C + +GYTGEDG EI VP E I + LL D +
Sbjct: 195 KYAP-QLADMVFMTAKRVDVCGVNCLASCSGYTGEDGYEILVPAEHAETITKTLLEDSGI 253
Query: 420 KLAGLGARDSL 430
GLGARDSL
Sbjct: 254 APIGLGARDSL 264
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
K RR+ FPG I +QI++G KR G T P R G EI + + +G ITSG
Sbjct: 294 KVRRDEADFPGGEKIIAQIENGTDMKRIGLTLIDKAPAREGSEIATKDGKIIGVITSGGH 353
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
+ K +AMGY++ Y++ G EL V VR+K V++MPFVK NYY
Sbjct: 354 GHTAGKPVAMGYVQRGYTQAGTELDVLVRNKPRAAVVSRMPFVKQNYY 401
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++ LIAVQGPL+ ++ ++ L+ + FMT++ + G+ C + +GYTGEDG EI V
Sbjct: 177 DDNALIAVQGPLTRKLMAKYAP-QLADMVFMTAKRVDVCGVNCLASCSGYTGEDGYEILV 235
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P E I + LL D + GLGARDSL
Sbjct: 236 PAEHAETITKTLLEDSGIAPIGLGARDSL 264
>gi|422415842|ref|ZP_16492799.1| glycine cleavage system T protein [Listeria innocua FSL J1-023]
gi|313623891|gb|EFR94005.1| glycine cleavage system T protein [Listeria innocua FSL J1-023]
Length = 362
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVEGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ + D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTEKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV +++ D+ ++ +S+ E G +A+QGP + IL + TD +LSS+ +F
Sbjct: 124 EWMV------QNIVGDVTVKNVSS-EFGQLALQGPNAEKILSKLTDANLSSISFFGFIED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD +LSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EFGQLALQGPNAEKILSKLTDANLSSISFFGFIEDADVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EA+L+ E V GLGARD+L
Sbjct: 202 PSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + +Q ++G++RK G G+P R Y +F ND+ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKQALINQKEAGLTRKLVGIELIERGIP-RHDYPVF-LNDKEIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
ITSG SP+L NI + I+ AY+++G EL V +R+K+V KV PF K
Sbjct: 310 ITSGTQSPTLGTNIGLALIDTAYTELGQELEVGIRNKKVKAKVVPTPFYK 359
>gi|138896001|ref|YP_001126454.1| glycine cleavage system aminomethyltransferase T [Geobacillus
thermodenitrificans NG80-2]
gi|196248894|ref|ZP_03147594.1| glycine cleavage system T protein [Geobacillus sp. G11MC16]
gi|166221553|sp|A4IQV5.1|GCST_GEOTN RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|134267514|gb|ABO67709.1| Aminomethyltransferase, glycine cleavage system protein T
[Geobacillus thermodenitrificans NG80-2]
gi|196211770|gb|EDY06529.1| glycine cleavage system T protein [Geobacillus sp. G11MC16]
Length = 365
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 132/238 (55%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+ ++ +G K V F G+ MPVQ+ SI H R++ +FDVSHM + +V G
Sbjct: 3 KRTPLFPVYARYGAKTVEFGGWEMPVQFS--SIKEEHNAVRTRAGLFDVSHMGEIIVRGG 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV +L PG+ +L +E G DDL++ + ED LV NA+ + D
Sbjct: 61 GSLPFLQKLMTNDVAKLRPGRVQYTLMCDESAGTVDDLLIYQKGEDDYLLVVNAANTEKD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
+ D D+ L+ +SA E L+A+QGP + +LQ+ TD+DLS+L F
Sbjct: 121 FAWLSEHAD------GDVELEDVSA-ETALLALQGPAAERVLQKLTDMDLSALRPFSFQD 173
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
+A + ++R GYTGEDG E+ E + EA+L +++ V GLGARD+L
Sbjct: 174 GVEVASVKTLVSRTGYTGEDGFELYCQAEDAITLWEAILTAGAEDGVLPCGLGARDTL 231
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGY 516
D+ L+ +S E L+A+QGP + +LQ+ TD+DLS+L F +A + ++R GY
Sbjct: 131 DVELEDVSAE-TALLALQGPAAERVLQKLTDMDLSALRPFSFQDGVEVASVKTLVSRTGY 189
Query: 517 TGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
TGEDG E+ E + EA+L +++ V GLGARD+L
Sbjct: 190 TGEDGFELYCQAEDAITLWEAILTAGAEDGVLPCGLGARDTL 231
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G ++++ Q ++G R+ G G+P R GY +F A ++ G +T+G SP+LKKN
Sbjct: 267 FIGQAVLKQQKEAGPPRRLVGIEMIDKGIP-RHGYRVFAAGEE-AGFVTTGTQSPTLKKN 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I + ++ + +G E+ V +R KR+ + PF K
Sbjct: 325 IGLALVKAEVAAIGQEVEVDIRGKRLKATIVPTPFYK 361
>gi|399053528|ref|ZP_10742380.1| glycine cleavage system T protein [Brevibacillus sp. CF112]
gi|398048893|gb|EJL41359.1| glycine cleavage system T protein [Brevibacillus sp. CF112]
Length = 367
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 132/238 (55%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+D + +G K + F G+ +PVQ+ SI H R+K +FDVSHM + V G+
Sbjct: 5 KRTPLFDSYAKYGAKTIDFGGWELPVQFS--SIGQEHEAVRTKAGLFDVSHMGEVDVKGE 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+L+ + DV +L G+ S+ GG DDL+V K +D LV NA +D
Sbjct: 63 SALEYLQRVTTNDVSKLAVGQAQYSVLCYPDGGTVDDLLVYKYADDHYLLVINAGN--ID 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
D + L + ++ +S + IA+QGPL+ +ILQ+ T DLS + +F R
Sbjct: 121 KDYAWLEE----HLIPGVTIENISP-QTAQIAIQGPLAESILQKLTATDLSKIGFFRFER 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS--DEDVKL-AGLGARDSL 430
+AGI ++R GYTGEDG EI +P E+ + +ALL ED L GLGARD+L
Sbjct: 176 DVEVAGISALVSRTGYTGEDGFEIYLPAERAAELWDALLEAGKEDGLLPCGLGARDTL 233
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYT 517
+ ++ +SP+ IA+QGPL+ +ILQ+ T DLS + +F R +AGI ++R GYT
Sbjct: 134 VTIENISPQ-TAQIAIQGPLAESILQKLTATDLSKIGFFRFERDVEVAGISALVSRTGYT 192
Query: 518 GEDGVEISVPGEQCTHIVEALLS--DEDVKL-AGLGARDSL 555
GEDG EI +P E+ + +ALL ED L GLGARD+L
Sbjct: 193 GEDGFEIYLPAERAAELWDALLEAGKEDGLLPCGLGARDTL 233
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G ++++Q ++G RK G G+P R Y ++ ++ VG +TSG SP+LKKN
Sbjct: 269 FIGQEVLKAQKENGAPRKLVGIEMIDRGIP-RTHYPVY-VGEELVGEVTSGTQSPTLKKN 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ + ++ ++ +G +L V +R KR+ +V PF K
Sbjct: 327 VGLALVKSEHAALGTQLEVEIRGKRLKAEVVAAPFYK 363
>gi|229269508|ref|YP_001168493.2| glycine cleavage system aminomethyltransferase T [Rhodobacter
sphaeroides ATCC 17025]
Length = 377
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 131/238 (55%), Gaps = 15/238 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R PL+DLH+S G +MVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q ++ K
Sbjct: 9 RRLPLHDLHVSLGARMVPFAGWEMPVQYPA-GVMKEHLHTRAAAGLFDVSHMGQLLLRPK 67
Query: 257 HREE----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
LE + DV L G+ + T++ GGI DDL+ D +F+V NA+
Sbjct: 68 GAMADLGAALERLMPVDVLGLPEGRQRYGILTSDTGGILDDLMFANR-GDHVFVVVNAAC 126
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
D + ++ + + + S E RGL+A+QGP + T L R +++L FM
Sbjct: 127 VANDTAHL---REELREVA-----EVASVESRGLLALQGPAAETALARLVPA-VAALRFM 177
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP EALL+ E+V GLGARDSL
Sbjct: 178 DFAVADWQGEALWISRSGYTGEDGFEISVPRGIIAPFAEALLAMEEVAPIGLGARDSL 235
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
+ S E RGL+A+QGP + T L R +++L FM G ++R+GYTGEDG
Sbjct: 143 EVASVESRGLLALQGPAAETALARLVPA-VAALRFMDFAVADWQGEALWISRSGYTGEDG 201
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP EALL+ E+V GLGARDSL
Sbjct: 202 FEISVPRGIIAPFAEALLAMEEVAPIGLGARDSL 235
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 27 IQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIE 85
I ++++G R R G G P+R G E++ + VG +TSG +PSL+ +AMGY+
Sbjct: 283 ILRELEAGPERLRVGLRPEGRAPMREGTELYTPDGTPVGRVTSGGFAPSLEAPVAMGYVA 342
Query: 86 PAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
A + G L VR KR+ V VT +PF S Y
Sbjct: 343 TAQAAPGTALAGEVRGKRLPVMVTDLPFRPSTY 375
>gi|226947956|ref|YP_002803047.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum A2 str. Kyoto]
gi|254797868|sp|C1FTW3.1|GCST_CLOBJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|226843176|gb|ACO85842.1| glycine cleavage system T protein [Clostridium botulinum A2 str.
Kyoto]
Length = 370
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEAMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + +S + +A QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMDHKGDF-----DVEIVDVS-DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFEIYCKPEDAKELWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVDGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKELWHAILNAGKEEGAQPIGLGARDTL 234
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K++
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKKL 353
>gi|170760490|ref|YP_001786048.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum A3 str. Loch Maree]
gi|238688514|sp|B1KWD5.1|GCST_CLOBM RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|169407479|gb|ACA55890.1| glycine cleavage system T protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 370
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEAMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + +S + +A+QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMDHKGDF-----DVEIADVS-DSIAQLALQGPLAEEILQKIVDVDLQEIKFFKLRRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LALQGPLAEEILQKIVDVDLQEIKFFKLRRDVLVDGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKGLWHAILNAGKEEGAQPIGLGARDTL 234
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELIDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKEL 353
>gi|375088763|ref|ZP_09735101.1| glycine cleavage system T protein [Dolosigranulum pigrum ATCC
51524]
gi|374561728|gb|EHR33067.1| glycine cleavage system T protein [Dolosigranulum pigrum ATCC
51524]
Length = 367
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 130/239 (54%), Gaps = 14/239 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD ++S K++ F G+++PV+Y +I H R KV +FDVSHM + +TG+
Sbjct: 6 KKTPLYDYNVSQDLKLIDFGGWALPVKY--TNIQEEHHAVREKVGMFDVSHMGEIFITGE 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
EW+ + D+ ++ + + T E GG+ DDLI K ED ++ NAS +
Sbjct: 64 KATEWINGLITNDLTKMSVNQCQYTALTYEDGGMIDDLIFFKFAEDKYYVTPNASNKDKV 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + D + +++ GLIA+QGP + +L + TD DLS + F +P
Sbjct: 124 LKWLQDHNDGSVEIDD-------QSDDTGLIALQGPDAEAVLSKVTDTDLSEIKFYRFKP 176
Query: 377 CTIAGIPCTL--TRAGYTGEDGVEISVPGEQCTHIVEALLSDED---VKLAGLGARDSL 430
G T+ +R GYTGEDG EI VPGE+ + + LL + ++ GLGARD+L
Sbjct: 177 AVQVGEVETILVSRTGYTGEDGFEIYVPGEKLEDVWKLLLEAGEAFGLQECGLGARDTL 235
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL--TRAGYTGEDGVEI 524
++ GLIA+QGP + +L + TD DLS + F +P G T+ +R GYTGEDG EI
Sbjct: 142 DDTGLIALQGPDAEAVLSKVTDTDLSEIKFYRFKPAVQVGEVETILVSRTGYTGEDGFEI 201
Query: 525 SVPGEQCTHIVEALLSDED---VKLAGLGARDSL 555
VPGE+ + + LL + ++ GLGARD+L
Sbjct: 202 YVPGEKLEDVWKLLLEAGEAFGLQECGLGARDTL 235
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 36 SRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE 94
R GF TG I R G ++ + + +G +TSG SP+L K I M ++ + +G E
Sbjct: 287 ERVSRGFDVTGKGIVREGAKVL-LDGEEIGEVTSGTKSPTLDKAIGMAIVDRKKAPIGTE 345
Query: 95 LWVRVRDKRVDVKVTKMPFVK 115
+ VR + + +TK ++K
Sbjct: 346 VEFEVRRRTIPGIITKKDWLK 366
>gi|345860005|ref|ZP_08812334.1| glycine cleavage system T protein [Desulfosporosinus sp. OT]
gi|344326866|gb|EGW38315.1| glycine cleavage system T protein [Desulfosporosinus sp. OT]
Length = 365
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ H K++ F G+ MPVQY V H R+K +FDVSHM + V GK
Sbjct: 5 KRTPLYEGHQVAKAKLIDFGGWEMPVQYAGV--IEEHQTVRTKAGLFDVSHMGEIDVHGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + DV +L+ GK S GGI DDL+V + + F+V NAS D
Sbjct: 63 EALEFVQMLITNDVSKLEDGKILYSPMCYPDGGIVDDLLVYRYDSNHFFIVVNASNTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M+ F ++ Q+ IA+QGPL+ TILQR ++++LS + + +
Sbjct: 123 YTWMLKQVKNFDVSVDNVTDQYAQ------IALQGPLAETILQRISNINLSKIKYYAFQH 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
I + C ++R GYTGEDG EI V E + + +L + E V+ GLGARD+L
Sbjct: 177 GKIDSVQCLISRTGYTGEDGFEIYVAPEYVRQLWQRILEIGAAEGVEPIGLGARDTL 233
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
IA+QGPL+ TILQR ++++LS + + + I + C ++R GYTGEDG EI V E
Sbjct: 147 IALQGPLAETILQRISNINLSKIKYYAFQHGKIDSVQCLISRTGYTGEDGFEIYVAPEYV 206
Query: 532 THIVEALL---SDEDVKLAGLGARDSL 555
+ + +L + E V+ GLGARD+L
Sbjct: 207 RQLWQRILEIGAAEGVEPIGLGARDTL 233
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIA 80
F G +Q+Q + G+ RK G G I + N + +G +TSG SP+L KNIA
Sbjct: 268 FIGRDALQAQKEQGIPRKLVGLEMIGRGIARSHYPLQKNGENIGFVTSGSFSPTLNKNIA 327
Query: 81 MGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+G I + G L V +R K V K+ F K
Sbjct: 328 LGLIRADLAVQGDSLDVLIRGKTVQAKMIPTLFYK 362
>gi|317153275|ref|YP_004121323.1| glycine cleavage system T protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943526|gb|ADU62577.1| glycine cleavage system T protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 360
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 141/304 (46%), Gaps = 33/304 (10%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TP+ H HG KM PFAGF MPVQY + I H HTRSK +FD+ HM + + G
Sbjct: 7 TPITKWHREHGAKMAPFAGFDMPVQYKGIII--EHKHTRSKAGIFDICHMGEFKLAGPGA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
L ++ D+ L PGK N GGI DDLI+ ED LV N + R D
Sbjct: 65 MNALNTVVSHDLTTLGPGKCRYGFLLNASGGIIDDLIIYCLAEDEYMLVVNGACRDKDF- 123
Query: 319 LMVAAQDRFKSLGKDIHLQFLS-AEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
+Q + LG L F ++E G I VQGP S ++ T + L +
Sbjct: 124 ----SQIKANLLGG---LSFTDISDETGKIDVQGPESLDVINALTGRKWNELKYFNFEAT 176
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITL- 436
G P ++R GYTGE G E+ +P ++ + E L +D V+ GLGARD+L +I
Sbjct: 177 DCLGFPMLISRTGYTGELGYELYLPADKALAVWEKLAADTRVEPVGLGARDTLRLEIGYP 236
Query: 437 ---------NTPVPHGS---LKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQ 484
+TPV G+ LK D G Q L P +A++G ++
Sbjct: 237 LYGQDLDDEHTPVEAGAGFFLKKETDYIGRAGLGTVRQMLVP-----LAIEGRRTA---- 287
Query: 485 RHTD 488
RH D
Sbjct: 288 RHYD 291
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E G I VQGP S ++ T + L + G P ++R GYTGE G E+ +
Sbjct: 141 DETGKIDVQGPESLDVINALTGRKWNELKYFNFEATDCLGFPMLISRTGYTGELGYELYL 200
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P ++ + E L +D V+ GLGARD+L
Sbjct: 201 PADKALAVWEKLAADTRVEPVGLGARDTL 229
>gi|168178072|ref|ZP_02612736.1| glycine cleavage system T protein [Clostridium botulinum NCTC 2916]
gi|182671482|gb|EDT83456.1| glycine cleavage system T protein [Clostridium botulinum NCTC 2916]
Length = 370
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 132/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGIFDVSHMGEVMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINILKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + ++ +A+QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMDHKGDF-----DVEI-VDESDSIAQLALQGPLAEEILQKIVDIDLQEIKFFKLKRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LALQGPLAEEILQKIVDIDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKGLWHAILNAGKEEGAQPIGLGARDTL 234
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKEL 353
>gi|145556575|gb|ABP71188.1| glycine cleavage system T protein [Rhodobacter sphaeroides ATCC
17025]
Length = 392
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 131/238 (55%), Gaps = 15/238 (6%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+R PL+DLH+S G +MVPFAG+ MPVQY A + HLHTR+ +FDVSHM Q ++ K
Sbjct: 24 RRLPLHDLHVSLGARMVPFAGWEMPVQYPA-GVMKEHLHTRAAAGLFDVSHMGQLLLRPK 82
Query: 257 HREE----WLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASR 312
LE + DV L G+ + T++ GGI DDL+ D +F+V NA+
Sbjct: 83 GAMADLGAALERLMPVDVLGLPEGRQRYGILTSDTGGILDDLMFANR-GDHVFVVVNAAC 141
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM 372
D + ++ + + + S E RGL+A+QGP + T L R +++L FM
Sbjct: 142 VANDTAHL---REELREVA-----EVASVESRGLLALQGPAAETALARLVPA-VAALRFM 192
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
G ++R+GYTGEDG EISVP EALL+ E+V GLGARDSL
Sbjct: 193 DFAVADWQGEALWISRSGYTGEDGFEISVPRGIIAPFAEALLAMEEVAPIGLGARDSL 250
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 462 QFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDG 521
+ S E RGL+A+QGP + T L R +++L FM G ++R+GYTGEDG
Sbjct: 158 EVASVESRGLLALQGPAAETALARLVPA-VAALRFMDFAVADWQGEALWISRSGYTGEDG 216
Query: 522 VEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
EISVP EALL+ E+V GLGARDSL
Sbjct: 217 FEISVPRGIIAPFAEALLAMEEVAPIGLGARDSL 250
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 27 IQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIE 85
I ++++G R R G G P+R G E++ + VG +TSG +PSL+ +AMGY+
Sbjct: 298 ILRELEAGPERLRVGLRPEGRAPMREGTELYTPDGTPVGRVTSGGFAPSLEAPVAMGYVA 357
Query: 86 PAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
A + G L VR KR+ V VT +PF S Y
Sbjct: 358 TAQAAPGTALAGEVRGKRLPVMVTDLPFRPSTY 390
>gi|410696736|gb|AFV75804.1| glycine cleavage system T protein [Thermus oshimai JL-2]
Length = 349
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 122/235 (51%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPLY HL GG+MV FAG+++P+QY SI HL R VFDVSHM + + G+
Sbjct: 2 KETPLYQAHLRRGGRMVEFAGYALPLQY--TSIKEEHLAVRRGAGVFDVSHMGEFFIRGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV L G+ S+ NE+GG+ DD+ + + E +V NA+ D
Sbjct: 60 EALAFLQWVTANDVGRLRVGRAQYSMLPNEKGGVVDDIYLYRLGEGEYLMVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLS-AEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
K+L + ++ L +E L+A+QGP + +LQ TD DLS
Sbjct: 120 W-------AHLKALAQGFRVELLDRSEATALLALQGPKAVEVLQALTDQDLSQRKKNDVF 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG L R GYTGEDG E+ + E + EALL V GLGARD+L
Sbjct: 173 RAEVAGKEALLARTGYTGEDGFELFLAPEDAEAVFEALLEGGAVP-CGLGARDTL 226
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 452 FKSLGKDIHLQFLS-PEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
K+L + ++ L E L+A+QGP + +LQ TD DLS +AG
Sbjct: 123 LKALAQGFRVELLDRSEATALLALQGPKAVEVLQALTDQDLSQRKKNDVFRAEVAGKEAL 182
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
L R GYTGEDG E+ + E + EALL V GLGARD+L
Sbjct: 183 LARTGYTGEDGFELFLAPEDAEAVFEALLEGGAVP-CGLGARDTL 226
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Query: 44 STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE--LWVRVRD 101
TG+P R GY + + ++RVG +TSG SP L+K IA+ Y+ G E +V VR
Sbjct: 281 ETGIP-REGYPVLS-GEERVGRVTSGGFSPLLEKGIALAYVAE-----GAEGPFFVEVRG 333
Query: 102 KRVDVKVTKMPFV 114
++V ++ +PFV
Sbjct: 334 RKVPASLSPLPFV 346
>gi|188587345|ref|YP_001918890.1| aminomethyltransferase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|229807551|sp|B2A2T4.1|GCST_NATTJ RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|179352032|gb|ACB86302.1| aminomethyltransferase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 365
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 129/244 (52%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPLYD+H GGK++ F G+ +PVQ+ I + TR + +FDVSHM + +V G
Sbjct: 5 QKTPLYDIHKERGGKIIDFGGWYLPVQF--TGIIDEVMTTRKEAGLFDVSHMGEIIVEGP 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+L+ + DV L PGK + E GG DD ++ K E+ L+ NA+ D
Sbjct: 63 KALEYLQKMVPNDVARLKPGKILYTPMCYENGGTVDDFLIYKMDENKFLLIVNAANTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+ + + + L+ LS +E G IA+QGP + ILQR TD L + +F
Sbjct: 123 FEWLQENNT------EGVELKNLS-DEYGQIAIQGPKAEKILQRLTDTPLKEIKFFNFKE 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSLSG 432
+ G+ ++R GYTGE+G EI + E+ + E + ++ +K GLGARD L
Sbjct: 176 DVDLDGVKALISRTGYTGENGFEIYIKAEETAKLWEKIEDAGENDGLKPIGLGARDVLRF 235
Query: 433 DITL 436
++ L
Sbjct: 236 EVCL 239
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYT 517
+ L+ LS +E G IA+QGP + ILQR TD L + +F + G+ ++R GYT
Sbjct: 134 VELKNLS-DEYGQIAIQGPKAEKILQRLTDTPLKEIKFFNFKEDVDLDGVKALISRTGYT 192
Query: 518 GEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
GE+G EI + E+ + E + ++ +K GLGARD L
Sbjct: 193 GENGFEIYIKAEETAKLWEKIEDAGENDGLKPIGLGARDVL 233
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITS 68
P + +T F G ++ +Q + G+ R GF G+P R Y I + Q +G ++S
Sbjct: 259 PFVKLNKTEDFLGKDVLVNQKEQGLERVLVGFEMIDRGIP-RTNY-ILMKDGQEIGFVSS 316
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
G SP+L K + +G+I+P + + G E+ V++R K K+ K PF +
Sbjct: 317 GSQSPTLDKALGLGFIKPEHDQEGNEIEVKIRKKTAKAKIVKTPFYR 363
>gi|315282209|ref|ZP_07870666.1| glycine cleavage system T protein [Listeria marthii FSL S4-120]
gi|313614144|gb|EFR87831.1| glycine cleavage system T protein [Listeria marthii FSL S4-120]
Length = 362
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ + D
Sbjct: 64 STSYLQYLLSNDIEKIKVGKAQYNIMCYETGGTVDDLVVYKKAETEYILVVNAANTEKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLS++ +F
Sbjct: 124 EWMV------KNVRGDVTVTNVSS-EFGQLALQGPNAEKILSKLTDVDLSAISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI + + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMQSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLS++ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EFGQLALQGPNAEKILSKLTDVDLSAISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EA+L+ E V GLGARD+L
Sbjct: 202 QSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N+Q +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIDQKEAGLARKLVGIELIERGIP-RHDYPVF-LNEQEIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++ EL V +R+K++ KV +PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTELDQELEVGIRNKKIKAKVVPIPFYK 359
>gi|389818555|ref|ZP_10208836.1| glycine cleavage system T protein [Planococcus antarcticus DSM
14505]
gi|388463838|gb|EIM06181.1| glycine cleavage system T protein [Planococcus antarcticus DSM
14505]
Length = 366
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL++ + +GGK + F G+ +PVQ+ SI H R+K +FDVSHM + VTG
Sbjct: 5 KRTPLFETYSKYGGKTIDFGGWELPVQFS--SIKEEHEAVRTKAGLFDVSHMGEIFVTGA 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++L+ + DV ++ G+ + E GG DDL+V K + LV NAS + D
Sbjct: 63 DSLDYLQHLVTNDVSKIQGGQAQYTAMCYEDGGTVDDLLVYKLADQHYLLVVNASNIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
+ M ++ K+ D+ L S E GL+A+QGPL+ T+LQR TD DLS++ F +
Sbjct: 123 FNWM----EQVKT--GDVTLDNAS-ERYGLLALQGPLAETVLQRLTDEDLSAIKPFRFKQ 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 430
I G L+R GYTGE G EI + + + +LS+ E V GLGARD+L
Sbjct: 176 DVEIIGHKVILSRTGYTGESGFEIYAAPDALVDLWDGILSEGKSEGVVPVGLGARDTL 233
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G +++Q ++GV RK G G+P R GY I+ A +Q++G +T+G SP+LKKN
Sbjct: 269 FNGKKALEAQKEAGVPRKLMGIEMIDKGIP-RNGYPIY-AGNQKIGEVTTGTQSPTLKKN 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I + + Y+++GVEL V +R KR+ K + PF K
Sbjct: 327 IGLALVSSDYAELGVELEVEIRGKRLKAKTVETPFYK 363
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 465 SPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGYTGEDGVE 523
+ E GL+A+QGPL+ T+LQR TD DLS++ F + I G L+R GYTGE G E
Sbjct: 139 ASERYGLLALQGPLAETVLQRLTDEDLSAIKPFRFKQDVEIIGHKVILSRTGYTGESGFE 198
Query: 524 ISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
I + + + +LS+ E V GLGARD+L
Sbjct: 199 IYAAPDALVDLWDGILSEGKSEGVVPVGLGARDTL 233
>gi|153932816|ref|YP_001383080.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum A str. ATCC 19397]
gi|153934598|ref|YP_001386629.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum A str. Hall]
gi|166221546|sp|A7FRV3.1|GCST_CLOB1 RecName: Full=Aminomethyltransferase; AltName: Full=Glycine
cleavage system T protein
gi|152928860|gb|ABS34360.1| glycine cleavage system T protein [Clostridium botulinum A str.
ATCC 19397]
gi|152930512|gb|ABS36011.1| glycine cleavage system T protein [Clostridium botulinum A str.
Hall]
Length = 370
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEAMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + +S + +A QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMDHKGDF-----DVEIVDVS-DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKGLWHAILNAGKEEGAQPIGLGARDTL 234
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKEL 353
>gi|148378696|ref|YP_001253237.1| glycine cleavage system aminomethyltransferase T [Clostridium
botulinum A str. ATCC 3502]
gi|148288180|emb|CAL82248.1| aminomethyltransferase [Clostridium botulinum A str. ATCC 3502]
Length = 375
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 12 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEAMVTGKDA 69
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 70 GKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 129
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + +S + +A QGPL+ ILQ+ D+DL + +F R
Sbjct: 130 WIMDHKGDF-----DVEIVDVS-DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 183
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 184 LVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTLRFEA 243
Query: 435 TL 436
+L
Sbjct: 244 SL 245
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 152 LAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPED 211
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 212 AKGLWHAILNAGKEEGAQPIGLGARDTL 239
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 275 FIGKDALIKQKAEGVTRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 332
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 333 IGLALVEEQYSKIGTEFNIKVRKKEL 358
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,908,151,148
Number of Sequences: 23463169
Number of extensions: 384973673
Number of successful extensions: 838995
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3078
Number of HSP's successfully gapped in prelim test: 2329
Number of HSP's that attempted gapping in prelim test: 808491
Number of HSP's gapped (non-prelim): 17172
length of query: 555
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 407
effective length of database: 8,886,646,355
effective search space: 3616865066485
effective search space used: 3616865066485
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)