BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4854
(555 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48728|GCST_HUMAN Aminomethyltransferase, mitochondrial OS=Homo sapiens GN=AMT PE=1
SV=1
Length = 403
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 162/238 (68%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
>sp|Q8CFA2|GCST_MOUSE Aminomethyltransferase, mitochondrial OS=Mus musculus GN=Amt PE=2
SV=1
Length = 403
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 175/285 (61%), Gaps = 15/285 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHVDSHLHTRRHCSLFDVSHMLQTKIFGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + LES+ V D+ EL P +GTLSLFTNE GGI DDLIV+ T E L++VSNA R D
Sbjct: 93 DRVKLLESVVVGDIAELRPNQGTLSLFTNEAGGILDDLIVSNTSEGHLYVVSNAGCRDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM F++ G D+ L+ + E L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---ENALLALQGPTATQVLQAGVTDDMKKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL----- 430
+ G+ C +TR GYTGEDGVEISVP H+ LL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPATGAVHLATTLLKNPEVKLAGLAARDSLRLEAG 269
Query: 431 ----SGDITLNTPVPHGSLKLSNDRFKSLGKDI-HLQFLSPEERG 470
DI +T GSL + + + + D + + P+ +G
Sbjct: 270 LCLYGNDIDEHTTPVEGSLSWTLGKRRRIAMDFPGAKIIVPQLKG 314
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 69/109 (63%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA II Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRIAMDFPGAKIIVPQLKGEVQRRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYYT 401
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 445 LKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ F++ G D+ L+ + E L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---ENALLALQGPTATQVLQAGVTDDMKKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ LL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPATGAVHLATTLLKNPEVKLAGLAARDSL 264
>sp|P28337|GCST_CHICK Aminomethyltransferase, mitochondrial OS=Gallus gallus GN=AMT PE=2
SV=2
Length = 392
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 155/241 (64%), Gaps = 5/241 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+P ++TPL LH + GG+MVPFAG+S+PVQYG + SHLHTR S+FDVSHMLQ
Sbjct: 17 SAPEGLKQTPLDALHRARGGRMVPFAGWSLPVQYGRGHLE-SHLHTRRHCSLFDVSHMLQ 75
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V G+ R +LES+ V D+ EL PG+GTL+L TNE+G I DDLIVT T ED L++VSNA
Sbjct: 76 TRVYGRDRVRFLESLVVGDIAELRPGQGTLTLLTNERGDIVDDLIVTNTAEDHLYVVSNA 135
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
D +M ++ G D+HL+ G VQGP + +LQ DL+ L
Sbjct: 136 GCADKDRAVMEGRAAELRAAGGDVHLEVSGQRAAG---VQGPSMAQVLQAGLPDDLTKLT 192
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FMTS T+ G+P C +TR GYTGEDGVEISVP + + E LL +V AGL ARDS
Sbjct: 193 FMTSTATTVFGVPGCRVTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDS 252
Query: 430 L 430
L
Sbjct: 253 L 253
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 74/117 (63%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQR 62
+ + LL GKRRR FPGA+II Q+K RKR G TS G P+RP I
Sbjct: 273 VEAGLLWTLGKRRRTAMDFPGAAIIMEQVKEKPKRKRVGLTSVGPPLRPPAAILGPEGTP 332
Query: 63 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
VG +TSGCPSPSL KNIAMGY++ A+S+ G L V VR K+ VTKMPFV ++YY
Sbjct: 333 VGTVTSGCPSPSLGKNIAMGYVQAAHSRPGTTLTVEVRKKQHPALVTKMPFVPTHYY 389
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
++ G D+HL+ G VQGP + +LQ DL+ L FMTS T+ G+P C
Sbjct: 152 LRAAGGDVHLEVSGQRAAG---VQGPSMAQVLQAGLPDDLTKLTFMTSTATTVFGVPGCR 208
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + + E LL +V AGL ARDSL
Sbjct: 209 VTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDSL 253
>sp|P25285|GCST_BOVIN Aminomethyltransferase, mitochondrial OS=Bos taurus GN=AMT PE=1
SV=1
Length = 397
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 160/238 (67%), Gaps = 11/238 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 28 HRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVN-SHLHTRQHCSLFDVSHMLQTKIFGC 86
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT E L++VSNA R+ D
Sbjct: 87 DRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTSASEGHLYVVSNAGCREKD 146
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMT
Sbjct: 147 LTLM---QDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 200
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 201 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLKNPEVKLAGLAARDSL 258
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 68/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I Q+KS R+R G G P+R I + +GA+TSGCP
Sbjct: 287 GKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCP 346
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYY
Sbjct: 347 SPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVSTNYY 394
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 147 LTLMQDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 203
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 204 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLKNPEVKLAGLAARDSL 258
>sp|Q9TSZ7|GCST_CANFA Aminomethyltransferase, mitochondrial OS=Canis familiaris GN=AMT
PE=3 SV=1
Length = 403
Score = 221 bits (564), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 157/235 (66%), Gaps = 5/235 (2%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKILGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI+DDLIVT T E L++VSNA D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGIEDDLIVTSTSEGYLYVVSNAGCWDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM +++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQGKVRELQNMGSDVSLEVV---DNALLALQGPTATQVLQAGVADDLRKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAAAVRLAAALLENPEVKLAGLAARDSL 264
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 70/109 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I +Q+K V R+R G T G P+R I N +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGASVIIAQLKGKVQRRRVGLTCEGAPVRAHSPILNMEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPFV +NYYT
Sbjct: 353 SPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYYT 401
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
+++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS + G+ C
Sbjct: 163 LQNMGSDVSLEVV---DNALLALQGPTATQVLQAGVADDLRKLPFMTSAVMEVFGVSGCR 219
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 220 VTRCGYTGEDGVEISVPAAAAVRLAAALLENPEVKLAGLAARDSL 264
>sp|P49364|GCST_PEA Aminomethyltransferase, mitochondrial OS=Pisum sativum GN=GDCST
PE=1 SV=2
Length = 408
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ S ++T LYD H++HGGKMVPFAG+SMP+QY SI S L+ R S+FDVSHM
Sbjct: 31 ATESELKKTVLYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTLNCRQNGSLFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L G GTL++FTNE+GG DD ++TK +D L+LV NA
Sbjct: 90 LSLKGKDVVSFLEKLVIADVAALAHGTGTLTVFTNEKGGAIDDSVITKVTDDHLYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +ALL S+ ++L GLGARD
Sbjct: 208 FGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+ G S +R GF S+G P R EI + +G +TSG
Sbjct: 298 GKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPPRSHSEIQDEGGNNIGEVTSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIA+GY++ K G ++ + +R K+ + VTKMPFV + YY P
Sbjct: 358 SPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKQNEGVVTKMPFVPTKYYKP 407
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGEFRVLDINGSQCFL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +ALL S+ ++L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIRLTGLGARDSL 269
>sp|O49849|GCST_FLAAN Aminomethyltransferase, mitochondrial OS=Flaveria anomala GN=GDCST
PE=3 SV=1
Length = 407
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEADLKKTVLYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTINCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + VADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHIY--DERSLLALQGPLAGSTLQHLTKEDLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGDFRIIDINGSKCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI G + +R G STG P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNI MGY++ K G +L + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKP 406
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +YF R I G C L
Sbjct: 165 FKAKGGDVSWHIY--DERSLLALQGPLAGSTLQHLTKEDLSKMYFGDFRIIDINGSKCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 268
>sp|P54260|GCST_SOLTU Aminomethyltransferase, mitochondrial OS=Solanum tuberosum GN=GDCST
PE=2 SV=1
Length = 406
Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+ +GGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASDADLKKTVLYDFHVVNGGKMVPFAGWSMPIQY-KDSIMDSTVNCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L PG G+L++FTNE+GG DD +VTK D ++LV NA
Sbjct: 89 LSLKGKDTIPFLEKLVIADVAGLAPGTGSLTVFTNEKGGAIDDSVVTKVTNDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FKS G D+ +ER L+A+QGPL++ +LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKSFKSKGGDVSWHI--HDERSLLALQGPLAAPVLQYLTKDDLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G PC LTR GYTGEDG EISVP E + +ALL S+ ++L GLGARD
Sbjct: 207 FGEFRVLDINGAPCFLTRTGYTGEDGFEISVPSENALDLAKALLEKSEGKIRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 69/110 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI+ G +R GF S+G P R EI ++N Q +G ITSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRSHSEIQDSNGQNIGEITSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNIAMGY++ K G + + +R K D VTKMPFV + YY P
Sbjct: 357 SPCLKKNIAMGYVKTGNHKAGTNVKIVIRGKSYDGVVTKMPFVPTKYYKP 406
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FKS G D+ +ER L+A+QGPL++ +LQ T DLS +YF R I G PC L
Sbjct: 165 FKSKGGDVSWHI--HDERSLLALQGPLAAPVLQYLTKDDLSKMYFGEFRVLDINGAPCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +ALL S+ ++L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENALDLAKALLEKSEGKIRLTGLGARDSL 268
>sp|O23936|GCST_FLATR Aminomethyltransferase, mitochondrial OS=Flaveria trinervia
GN=GDCST PE=3 SV=1
Length = 407
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 154/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEADLKKTVLYDFHVANGGKMVPFAGWSMPIQY-KDSIMESTINCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + VADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDCVAFLEKLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEQHMKAFKAKGGDVSWHI--HDERSLLALQGPLAGSTLQHLTKDDLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I+G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGDFRIIDISGSKCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI G + +R G STG P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEQGENIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNI MGY++ K G +L + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKP 406
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +YF R I+G C L
Sbjct: 165 FKAKGGDVSWHI--HDERSLLALQGPLAGSTLQHLTKDDLSKMYFGDFRIIDISGSKCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 268
>sp|O65396|GCST_ARATH Aminomethyltransferase, mitochondrial OS=Arabidopsis thaliana
GN=GDCST PE=1 SV=1
Length = 408
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 155/242 (64%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDV+HM
Sbjct: 31 ASEADLKKTALYDFHVAHGGKMVPFAGWSMPIQY-KDSIMDSTVNCRENGSLFDVAHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE++ VADV L PG G+L++FTNE+GG DD ++TK ++ ++LV NA
Sbjct: 90 LSLKGKDCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FKS G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKSKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F + I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 208 FGNFQILDINGSTCFLTRTGYTGEDGFEISVPDEHAVDLAKAILEKSEGKVRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+K G + +R GF S+G P R E+ + + ++G ITSG
Sbjct: 298 GKRRRAEGGFLGADVILQQLKDGPTIRRVGFFSSGPPARSHSEVHDESGNKIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP+LKKNIAMGY++ K G ++ + VR K + +TKMPFV + YY P
Sbjct: 358 SPNLKKNIAMGYVKSGQHKTGTKVKILVRGKPYEGSITKMPFVATKYYKP 407
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FKS G D+ +ER L+A+QGPL++ +LQ T DLS LYF + I G C L
Sbjct: 166 FKSKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGNFQILDINGSTCFL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPDEHAVDLAKAILEKSEGKVRLTGLGARDSL 269
>sp|P49363|GCST_FLAPR Aminomethyltransferase, mitochondrial OS=Flaveria pringlei GN=GDCST
PE=2 SV=1
Length = 407
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 153/242 (63%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDVSHM
Sbjct: 30 ASEADLKKTVLYDFHVANGGKMVPFAGWSMPIQY-KDSIMESTINCRENGSLFDVSHMCG 88
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + VADV L PG G+L++FTNE+GG DD ++TK +D ++LV NA
Sbjct: 89 LSLKGKDCVPFLEKLVVADVAGLRPGTGSLTVFTNEKGGAIDDSVITKVTDDHIYLVVNA 148
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +Y
Sbjct: 149 GCRDKDLAHIEEHMKAFKAKGGDVSWHIY--DERSLLALQGPLAGSTLQHLTKEDLSKMY 206
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARD
Sbjct: 207 FGDFRIIDINGSKCFLTRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARD 266
Query: 429 SL 430
SL
Sbjct: 267 SL 268
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI G + +R G STG P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGF 356
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTP 121
SP LKKNI MGY++ K G +L + +R K + VTKMPFV + YY P
Sbjct: 357 SPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKP 406
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL+ + LQ T DLS +YF R I G C L
Sbjct: 165 FKAKGGDVSWHIY--DERSLLALQGPLAGSTLQHLTKEDLSKMYFGDFRIIDINGSKCFL 222
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 223 TRTGYTGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSL 268
>sp|Q54DD3|GCST_DICDI Aminomethyltransferase, mitochondrial OS=Dictyostelium discoideum
GN=gcvT PE=3 SV=1
Length = 403
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 154/249 (61%), Gaps = 13/249 (5%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS + ++T L +LH G KMVPF G+ MPVQY A + HLH R + +FDVSHM Q
Sbjct: 19 SSSNELKKTALNELHKELGAKMVPFCGWEMPVQYPA-GVMKEHLHVRKESGLFDVSHMGQ 77
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK R ++ ESI VAD+ L G LS+FTNE+GGI DD ++T DSL++V NA
Sbjct: 78 LRIHGKDRVKFFESIVVADLQALPTGHSKLSVFTNEKGGIIDDTMITNA-GDSLYVVVNA 136
Query: 311 SRRKVDMDLMVAAQDRFKSLG--KDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDLS 367
D+ + FKS+ D+ +Q L E+ LIA+QGP + +ILQ+ D D++
Sbjct: 137 GCADKDISHINEKIKEFKSVNPTHDVSMQLL--EDLSLIAIQGPTTESILQKFVKDQDIT 194
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED------VKL 421
++ FMT RP TIAGI C +TR GYTGEDG EISVP +Q + E L+ + +K
Sbjct: 195 NMEFMTQRPMTIAGIDCIVTRCGYTGEDGFEISVPSKQAVRLAELFLATSNASIESGIKP 254
Query: 422 AGLGARDSL 430
AGLGARDSL
Sbjct: 255 AGLGARDSL 263
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 11/114 (9%)
Query: 451 RFKSLG--KDIHLQFLSPEERGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGI 507
FKS+ D+ +Q L E+ LIA+QGP + +ILQ+ D D++++ FMT RP TIAGI
Sbjct: 152 EFKSVNPTHDVSMQLL--EDLSLIAIQGPTTESILQKFVKDQDITNMEFMTQRPMTIAGI 209
Query: 508 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDED------VKLAGLGARDSL 555
C +TR GYTGEDG EISVP +Q + E L+ + +K AGLGARDSL
Sbjct: 210 DCIVTRCGYTGEDGFEISVPSKQAVRLAELFLATSNASIESGIKPAGLGARDSL 263
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Query: 13 KRRRETGGFPGASIIQSQI-KSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
KRRRE GGFPGASIIQ Q+ K G +KR G G P R G I + + +Q +G +TSG
Sbjct: 293 KRRREEGGFPGASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSGT 352
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
SP +++I+M Y++ +SK+G ++ V +R K + ++KMPFV +NY
Sbjct: 353 ISPITRQSISMAYVKTPFSKIGTQVNVSIRGKPITATISKMPFVPTNY 400
>sp|P93256|GCST_MESCR Aminomethyltransferase, mitochondrial OS=Mesembryanthemum
crystallinum GN=GDCST PE=2 SV=1
Length = 408
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 151/242 (62%), Gaps = 5/242 (2%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
+S + ++T LYD H+++GGKMVPFAG+SMP+QY SI S ++ R S+FDV+HM
Sbjct: 31 ASEADLKKTALYDFHVANGGKMVPFAGWSMPIQY-KDSIMDSTINCRENGSLFDVAHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + V D+ L PG GTLS+ TNE+GG DD ++TK +D ++LV NA
Sbjct: 90 LSLKGKDCIPFLEKLVVGDIAGLAPGTGTLSVLTNEKGGAIDDTVITKVTDDHIYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R+ D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS Y
Sbjct: 150 GCREKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKFY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F I G PC LTR GYTGEDG EISVP E + +A+L S+ V+L G GARD
Sbjct: 208 FGQFTFLDINGFPCYLTRTGYTGEDGFEISVPNEYAVDLAKAMLEKSEGKVRLTGRGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 68/111 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I QI G ++R GF S+G P R EI N + +G ITSG
Sbjct: 298 GKRRRAEGGFLGAEVILKQIADGPPQRRVGFISSGPPARGHSEIQNEKGESIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPP 122
SP LKKNIAMGY++ K G ++ + VR K + VTKMPFV + YY P
Sbjct: 358 SPCLKKNIAMGYVKSGNHKAGTKVNILVRGKPYEGVVTKMPFVPTKYYKSP 408
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS YF I G PC L
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKFYFGQFTFLDINGFPCYL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L G GARDSL
Sbjct: 224 TRTGYTGEDGFEISVPNEYAVDLAKAMLEKSEGKVRLTGRGARDSL 269
>sp|O14110|GCST_SCHPO Probable aminomethyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gcv1 PE=3 SV=1
Length = 387
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 150/244 (61%), Gaps = 7/244 (2%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S ++ S+ +RTPLYDLHL G +VPFAGFSMPVQY +I+ASH TR +FDVSH
Sbjct: 14 SSTAASSSLKRTPLYDLHLKEGATIVPFAGFSMPVQYKGQTISASHKWTREHSGLFDVSH 73
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
M+Q V G++ +LESI + + EL P TLS FTNE GGI DD I++K E++ ++V
Sbjct: 74 MVQWFVRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDENTYYIV 133
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDL 366
+NA+ + D + + +K ++ + R LIA+QGP +++++Q+ ++D
Sbjct: 134 TNAACSEKDEANLKKHIENWKG------VELERVQGRALIAIQGPETASVVQKLIPNVDF 187
Query: 367 SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
S L F S G+ C +R+GYTGEDG E+S+P E LL+D V+ GLGA
Sbjct: 188 SVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIPEEVSVDFASTLLADTRVRPIGLGA 247
Query: 427 RDSL 430
RD+L
Sbjct: 248 RDTL 251
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR+ GGF G+S I ++K G SR+R GF VP R G + + VG +TSGCP
Sbjct: 280 GKRRRKEGGFVGSSRILKELKDGPSRRRVGFIVEKVPARHGSAV-EVDGVEVGQVTSGCP 338
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
SP+L KNIAMGYI +VG ++VR+K +V +MPFV+++YY
Sbjct: 339 SPTLGKNIAMGYISTGLHQVGTPAHIKVRNKLHPAQVVRMPFVETHYY 386
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 469 RGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP +++++Q+ ++D S L F S G+ C +R+GYTGEDG E+S+P
Sbjct: 164 RALIAIQGPETASVVQKLIPNVDFSVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIP 223
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E LL+D V+ GLGARD+L
Sbjct: 224 EEVSVDFASTLLADTRVRPIGLGARDTL 251
>sp|P48015|GCST_YEAST Aminomethyltransferase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GCV1 PE=1 SV=2
Length = 400
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 138/244 (56%), Gaps = 11/244 (4%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S ++T L+DLH+S GG MVP+AG+SMPV Y + SH TR+ +FDVSHMLQ+ +
Sbjct: 14 STLKKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKL 73
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS-LFLVSNASR 312
+G H ++L+ + D + L G GTLS+ N QGG+ DD I+TK +D+ ++V+NA
Sbjct: 74 SGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNAGC 133
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLS 367
+ D + D ++ G + Q+ E R L+A+QGP + +L+ DL
Sbjct: 134 AERDTEFF---HDELQN-GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLK 189
Query: 368 SLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
L+F + G + R GYTGEDG EIS+ E+ E LL++ +K GL A
Sbjct: 190 ELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAA 249
Query: 427 RDSL 430
RDSL
Sbjct: 250 RDSL 253
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 21 FPGASIIQSQIKSGV-SRKRTGFT--STGVPIRPGYEIFNAN-DQRVGAITSGCPSPSLK 76
F G + I Q+ + S+ R GF G R G +IF + + VG +TSG SP+L
Sbjct: 295 FNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLN 354
Query: 77 K-NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYY 119
NI Y++ Y K G +L V+VR+K +++ KMP V ++YY
Sbjct: 355 NINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYY 398
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 456 GKDIHLQFLSPEERGLIAVQGPLSSTILQ-----RHTDLDLSSLYFMTSRPCTIA-GIPC 509
G + Q+ E R L+A+QGP + +L+ DL L+F + G
Sbjct: 148 GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLKELFFGQRHEFALKDGSLV 207
Query: 510 TLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ R GYTGEDG EIS+ E+ E LL++ +K GL ARDSL
Sbjct: 208 QIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAARDSL 253
>sp|Q5SKX0|GCST_THET8 Aminomethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=gcvT PE=3 SV=1
Length = 349
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ HL G +MV FAG+ +P+QY SI HL R V VFDVSHM + +V GK
Sbjct: 2 KKTPLYEAHLRLGARMVDFAGYLLPLQY--TSIVEEHLAVRRAVGVFDVSHMGEFLVRGK 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ D +L G+ S+ NE+GG+ DD+ + + E+ +V NA+ D
Sbjct: 60 EALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ ++L K ++ A ER L+A+QGP ++++LQ TDLDLS
Sbjct: 120 L-------AHLQALAKGFRVELEDASERTALLALQGPKAASLLQGLTDLDLSQKRKNDVF 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
P +AG P L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 173 PARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 452 FKSLGKDIHLQFLSPEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
++L K ++ ER L+A+QGP ++++LQ TDLDLS P +AG P
Sbjct: 123 LQALAKGFRVELEDASERTALLALQGPKAASLLQGLTDLDLSQKRKNDVFPARVAGRPAR 182
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 183 LARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 46 GVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE--LWVRVRDKR 103
G+P R GY + + + VG +TSG SP L++ IA+ Y+E G E V VR +
Sbjct: 283 GIP-REGYRVLSGG-RPVGRVTSGGYSPLLQRGIALAYVEE-----GAEGPFQVEVRGRA 335
Query: 104 VDVKVTKMPFV 114
V ++ +PFV
Sbjct: 336 VPAALSPLPFV 346
>sp|Q3AET7|GCST_CARHZ Aminomethyltransferase OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=gcvT PE=3 SV=1
Length = 360
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 128/234 (54%), Gaps = 10/234 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ H+ G KMVPF G+ MPVQY I H+ R+ V +FDVSHM + +TGK
Sbjct: 5 KRTPLYEEHIKLGAKMVPFGGWEMPVQY--TGILEEHMAVRTDVGMFDVSHMGEIEITGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E ++ + DV L+ G + GG DDL+ K + LV NA+ + D
Sbjct: 63 QAERFVNYLITNDVSRLNSGDVIYTTMCYPDGGTVDDLLAYKYSTERYLLVVNAANK--D 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
DL Q R+ D+ + LS +E IA+QGP + ILQ+ T DL+ + +
Sbjct: 121 KDLAHILQYRWD----DVTVTDLS-DETAEIALQGPRAQEILQKLTAFDLNQIKYFGFAE 175
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+PC ++R GYTGEDG EI T I LL + VK AGLGARD+L
Sbjct: 176 IEVAGVPCLVSRTGYTGEDGFEIYFAPNLATKIWNELL-NLGVKPAGLGARDTL 228
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 398 EISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITLNTPV-PHG-------SLKLSN 449
EI + G+Q V L++++ +L SGD+ T P G + K S
Sbjct: 56 EIEITGKQAERFVNYLITNDVSRLN--------SGDVIYTTMCYPDGGTVDDLLAYKYST 107
Query: 450 DRF----KSLGKDIHLQFLS------------PEERGLIAVQGPLSSTILQRHTDLDLSS 493
+R+ + KD L + +E IA+QGP + ILQ+ T DL+
Sbjct: 108 ERYLLVVNAANKDKDLAHILQYRWDDVTVTDLSDETAEIALQGPRAQEILQKLTAFDLNQ 167
Query: 494 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARD 553
+ + +AG+PC ++R GYTGEDG EI T I LL + VK AGLGARD
Sbjct: 168 IKYFGFAEIEVAGVPCLVSRTGYTGEDGFEIYFAPNLATKIWNELL-NLGVKPAGLGARD 226
Query: 554 SL 555
+L
Sbjct: 227 TL 228
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + +Q +G+ RK G G I R GYEI N + VG +TSG +P LKKN+
Sbjct: 263 FIGKEALLAQKNAGLKRKIVGLEMIGAGIPRQGYEIV-FNQRGVGFVTSGTFAPFLKKNL 321
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
AM ++ +++G E+ V +R K V +V PF K
Sbjct: 322 AMAMVDLEAAEIGTEVDVIIRGKGVRARVISRPFYK 357
>sp|Q8RCV9|GCST_THETN Aminomethyltransferase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=gcvT PE=3
SV=1
Length = 374
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 156/290 (53%), Gaps = 26/290 (8%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+++ + K++ FAG++MPVQ+ SI + H R+ +FDVSHM + +V GK
Sbjct: 11 KKTPLYEIYPKYNAKIIDFAGWAMPVQFE--SIISEHEAVRNAAGLFDVSHMGEIIVKGK 68
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+++ D+ +L+ + + N GG+ DDL+V K + LV NA+ + D
Sbjct: 69 DAFPFLQNLLTNDLSKLNDNQVLYTFMCNHNGGVIDDLLVYKYSNNYYLLVVNAANIEKD 128
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M+ +K + ++ +S ++ +A+QGP + ILQ+ TD DLS + +F
Sbjct: 129 YKWMLNNAGIYK-----VEIENVS-DKIAELAIQGPKAEEILQKLTDEDLSQIKFFYFKD 182
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSG 432
IAG+ C ++R GYTGEDG EI +P E + E +L D +K AGLGARD+L
Sbjct: 183 KVKIAGVECLVSRTGYTGEDGFEIYMPNEHAVTLWEKILEAGKDYGLKPAGLGARDTLRF 242
Query: 433 DITLN----------TPVPHG-SLKLSNDRFKSLGKDIHLQFLSPEERGL 471
+ L TP+ G + D+ +GKD L +E+GL
Sbjct: 243 EAGLPLYGNELGEDITPLEAGLGFFVKFDKGNFIGKD---ALLKQKEQGL 289
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + ILQ+ TD DLS + +F IAG+ C ++R GYTGEDG EI +P E
Sbjct: 153 LAIQGPKAEEILQKLTDEDLSQIKFFYFKDKVKIAGVECLVSRTGYTGEDGFEIYMPNEH 212
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E +L D +K AGLGARD+L
Sbjct: 213 AVTLWEKILEAGKDYGLKPAGLGARDTL 240
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSP 73
+ + G F G + Q + G+ RK GF G I R GYE+ A++Q++G +T+G SP
Sbjct: 269 KFDKGNFIGKDALLKQKEQGLKRKLVGFEMIGNGIPRHGYEV-QADNQKIGYVTTGYFSP 327
Query: 74 SLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
+LKKNI + I+ Y+++G ++ V +R+K
Sbjct: 328 TLKKNIGLALIDSKYAQIGNQIEVIIRNK 356
>sp|Q72LB1|GCST_THET2 Aminomethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=gcvT PE=3 SV=1
Length = 349
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 129/235 (54%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLY+ HL G +MV FAG+ +P+QY SI HL R V VFDVSHM + +V G+
Sbjct: 2 KKTPLYEAHLRLGARMVDFAGYLLPLQY--TSIVEEHLAVRRAVGVFDVSHMGEFLVRGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ D +L G+ S+ NE+GG+ DD+ + + E+ +V NA+ D
Sbjct: 60 EALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSR 375
+ ++L K ++ A ER L+A+QGP + +LQ D+DLS+
Sbjct: 120 L-------AHLQALAKGFRVELEDASERTALLALQGPKAQALLQGLVDVDLSTKRKNDVF 172
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
P +AG P L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 173 PARVAGRPARLARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 452 FKSLGKDIHLQFLSPEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT 510
++L K ++ ER L+A+QGP + +LQ D+DLS+ P +AG P
Sbjct: 123 LQALAKGFRVELEDASERTALLALQGPKAQALLQGLVDVDLSTKRKNDVFPARVAGRPAR 182
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
L R GYTGEDG E+ + E + AL+ + K AGLGARDSL
Sbjct: 183 LARTGYTGEDGFELFLAPEDAEPVFLALV-EAGAKPAGLGARDSL 226
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 46 GVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVE--LWVRVRDKR 103
G+P R GY + + VG +TSG SP L++ IA+ Y+E G E V VR +
Sbjct: 283 GIP-REGYRVLSGGCP-VGRVTSGGYSPLLQRGIALAYVEE-----GAEGPFQVEVRGRA 335
Query: 104 VDVKVTKMPFV 114
V ++ +PFV
Sbjct: 336 VPAALSPLPFV 346
>sp|A6LP67|GCST_THEM4 Aminomethyltransferase OS=Thermosipho melanesiensis (strain BI429 /
DSM 12029) GN=gcvT PE=3 SV=1
Length = 363
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 8/240 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ TPLY+ H+ G KMV FAGF+MP+QY SI L R V +FDVSHM + +V GK
Sbjct: 2 KYTPLYEEHVKLGAKMVDFAGFNMPIQY--TSIKDEVLAVRKNVGMFDVSHMGEVIVEGK 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++++ + D L PG+ + NE GG DDL+ K E+ LV NAS + D
Sbjct: 60 DSTKFVDFLITNDFKNLKPGEIVYTAMCNENGGFVDDLLAYKISEEKAMLVINASNIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M + F D+ L+ S +E LIAVQGP + LQ+ T++DL + + T
Sbjct: 120 FSWMKKISESF-----DVTLENKS-DEYVLIAVQGPNAQKTLQKITNVDLEQIGYYTFTE 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDITL 436
+ I ++R GYTGEDG EI + + L + +V AGLGARD L + +L
Sbjct: 174 GNVLDIKAIISRTGYTGEDGFEIYTTDKDGIIKIWKKLLNLNVIPAGLGARDCLRLEASL 233
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E LIAVQGP + LQ+ T++DL + + T + I ++R GYTGEDG EI
Sbjct: 139 DEYVLIAVQGPNAQKTLQKITNVDLEQIGYYTFTEGNVLDIKAIISRTGYTGEDGFEIYT 198
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ + L + +V AGLGARD L
Sbjct: 199 TDKDGIIKIWKKLLNLNVIPAGLGARDCL 227
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 10/112 (8%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G ++ Q++ G SR+ GF I R GY++F + + +G +TSG SP+L + I
Sbjct: 261 FMGKEALKRQLEEGTSRRLKGFKIIDKGIARHGYKVFK-DGKEIGYVTSGTFSPTLNQAI 319
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYTPPKIRKVKKKG 131
M IE Y K G + + +R+K V ++ KMPF + + K KKKG
Sbjct: 320 GMALIEKGY-KSGEIIEIEIRNKLVKAEIVKMPFYRGSV-------KSKKKG 363
>sp|A6TMY6|GCST_ALKMQ Aminomethyltransferase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=gcvT PE=3 SV=1
Length = 369
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 133/244 (54%), Gaps = 12/244 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+ ++ H GK++ F G++MPVQ+ I H RS +FDVSHM + + GK
Sbjct: 5 KKTPLFTVYEKHKGKLIDFGGWAMPVQFEG--IIPEHEAVRSNAGLFDVSHMGEVEIKGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+++ + D +++ + S E GG+ DDL+V K ED +LV NA + D
Sbjct: 63 DALNFVQYLITNDASQMEKNQIIYSFMCYENGGVVDDLLVYKFEEDYFYLVINAGNIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+ M+ +S D+ + +S + L A+QGP + ILQ+ T+ DLS L +F R
Sbjct: 123 YEWMLK-----QSTAYDVEVNNISNDVSEL-ALQGPKAEKILQKLTETDLSQLQFFYLQR 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSG 432
TI G+ C ++R GYTGEDG EI V + E LL ++ +K GLGARD+L
Sbjct: 177 DVTIDGVNCLISRTGYTGEDGFEIYVNPSDAVQLWEKLLEVGQEDGLKPIGLGARDTLRF 236
Query: 433 DITL 436
+ L
Sbjct: 237 EAAL 240
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + ILQ+ T+ DLS L +F R TI G+ C ++R GYTGEDG EI V
Sbjct: 147 LALQGPKAEKILQKLTETDLSQLQFFYLQRDVTIDGVNCLISRTGYTGEDGFEIYVNPSD 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E LL ++ +K GLGARD+L
Sbjct: 207 AVQLWEKLLEVGQEDGLKPIGLGARDTL 234
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 10 FPGKRRRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAIT 67
F K ++E F G + Q ++G++RK GF G+P R YE+++ +++G +T
Sbjct: 260 FAVKLKKEVD-FLGKKALIEQKEAGLTRKLVGFEMKDRGIP-RSDYEVYHQG-EKIGFVT 316
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNY 118
+G SP+LK+NI + I+ Y+++G E+ + +R K+V ++ F K NY
Sbjct: 317 TGYFSPTLKRNIGLALIDAKYAELGNEVDILIRKKQVKAELISKTFYKKNY 367
>sp|B0K242|GCST_THEPX Aminomethyltransferase OS=Thermoanaerobacter sp. (strain X514)
GN=gcvT PE=3 SV=1
Length = 368
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 138/238 (57%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL++L+ + GK++ FAG+++PVQ+ SI + H R+ +FDVSHM + V G+
Sbjct: 5 KKTPLFELYKKYNGKIIDFAGWALPVQFE--SIISEHEAVRNAAGLFDVSHMGEITVKGR 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+++ D+ +L + + N GG+ DDL+V K ++ +LV NA+ + D
Sbjct: 63 EAFNFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDDLLVYKYSDEHFYLVVNAANIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + + ++ ++ +S +E +A+QGP + ILQ+ TD DLS + +F
Sbjct: 123 YKWMKDNKGVY-----EVEIENIS-DEVAELAIQGPKAEEILQKLTDTDLSEIKFFCFKD 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
IAGI C ++R GYTGEDG EI +P + + E ++ + +K AGLGARD+L
Sbjct: 177 NVKIAGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIVEVGKEYGLKPAGLGARDTL 234
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEIS 525
+E +A+QGP + ILQ+ TD DLS + +F IAGI C ++R GYTGEDG EI
Sbjct: 142 DEVAELAIQGPKAEEILQKLTDTDLSEIKFFCFKDNVKIAGIECLVSRTGYTGEDGFEIY 201
Query: 526 VPGEQCTHIVEALLS---DEDVKLAGLGARDSL 555
+P + + E ++ + +K AGLGARD+L
Sbjct: 202 MPNKYAVELWEKIVEVGKEYGLKPAGLGARDTL 234
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
+ + G F G + Q + G+ RK GF G+P R GYE+ A++Q++G +T+G S
Sbjct: 263 KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIP-RHGYEV-RAHNQKIGYVTTGYFS 320
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
P+LKKNI + I+ Y+++G ++ + +R+K
Sbjct: 321 PTLKKNIGLALIDSKYAQLGNQIEIVIRNK 350
>sp|B8DFY0|GCST_LISMH Aminomethyltransferase OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=gcvT PE=3 SV=1
Length = 362
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVEGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTAKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIQGDVSVTNVSS-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIQGDVSVTNVSSE-YGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F ND+ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNDEEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTELGQEVEVGIRNKKIKAKIVPTPFYK 359
>sp|Q71ZX4|GCST_LISMF Aminomethyltransferase OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=gcvT PE=3 SV=1
Length = 362
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPSAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIRGDVSVTNVSSE-YGQLALQGPSAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTEIGQEVEVGIRNKKIKAKIVPTPFYK 359
>sp|C1L2Q4|GCST_LISMC Aminomethyltransferase OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=gcvT PE=3 SV=1
Length = 362
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILAKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTL 511
K++ D+ + +S E G +A+QGP + IL + TD+DLSS+ +F +AG+ +
Sbjct: 128 KNIRGDVSVTNVSSE-YGQLALQGPNAEKILAKLTDVDLSSISFFGFVEDADVAGVKTII 186
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 187 SRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q + G++RK G G+P R Y +F N++ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEVGLNRKLVGIELIERGIP-RHDYPVF-LNEEEIGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTEIGQEVEVGIRNKKVKAKIVPTPFYK 359
>sp|A8MEG4|GCST_ALKOO Aminomethyltransferase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=gcvT PE=3 SV=1
Length = 368
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 132/244 (54%), Gaps = 12/244 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+D H +GGK+V FAG+ M VQ+ +TA H R+ +FDVSHM + V GK
Sbjct: 5 KRTPLFDAHNRYGGKLVDFAGWEMSVQFEG--LTAEHEAVRNAAGIFDVSHMGEIEVRGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E +++ + DV L+ + + GGI DDL+V K ++ +LV NAS D
Sbjct: 63 DAEAFVQYLVTNDVAALEDNQIVYTFMCYPDGGIVDDLLVYKFNKEYYYLVVNASNSDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + + D+ + +S + +AVQGP + I+Q TD DLS + +F
Sbjct: 123 FAWMNENKGAY-----DVEIINIS-DSVSQVAVQGPKAEEIVQELTDTDLSEIPFFYFKN 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSG 432
I G C ++R GYTGEDG EI V ++ + + ++ D +K AGLGARD+L
Sbjct: 177 DVVINGANCLISRTGYTGEDGFEIYVDNDKVDALWDKIIEVGKDRGLKPAGLGARDTLRF 236
Query: 433 DITL 436
+ TL
Sbjct: 237 EATL 240
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+AVQGP + I+Q TD DLS + +F I G C ++R GYTGEDG EI V ++
Sbjct: 147 VAVQGPKAEEIVQELTDTDLSEIPFFYFKNDVVINGANCLISRTGYTGEDGFEIYVDNDK 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ + ++ D +K AGLGARD+L
Sbjct: 207 VDALWDKIIEVGKDRGLKPAGLGARDTL 234
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q + G+ RK GF G+P R GYE+ D+ +G +T+G SP+LKKN
Sbjct: 269 FIGKDALVRQKEEGLKRKVVGFEMKENGIP-RQGYEV-KVGDKVIGVVTTGYNSPTLKKN 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPF 113
I I+ Y+ +G + ++VR K + +V F
Sbjct: 327 IGYALIDAEYAALGTPIDIQVRKKTLKAEVVSKKF 361
>sp|Q8Y7D5|GCST_LISMO Aminomethyltransferase OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=gcvT PE=3 SV=1
Length = 362
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV K++ D+ + +S+ E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------KNIRGDVSVTNVSS-EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI +P + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EYGQLALQGPNAEKILSKLTDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
P + EA+L+ E V GLGARD+L
Sbjct: 202 PSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F N++++G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEQIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+L NI + I+ AY+++G E+ V +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGINIGLALIDTAYTELGQEVEVGIRNKKVKAKIVPTPFYK 359
>sp|B0KD95|GCST_THEP3 Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=gcvT PE=3 SV=1
Length = 368
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 134/238 (56%), Gaps = 12/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPL+DL+ + GK++ FAG+++PVQ+ SI + H R+ +FDVSHM + V G+
Sbjct: 5 KKTPLFDLYKKYNGKIIDFAGWALPVQFE--SIISEHEAVRNAAGLFDVSHMGEITVKGR 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+++ D+ +L + + N GG+ DDL+V K ++ LV NA+ + D
Sbjct: 63 EAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDDLLVYKYSDEHFLLVVNAANIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
M + ++ +I ++E +AVQGP + ILQ+ T DLS + +F
Sbjct: 123 YKWMKDNKGVYEVEINNI------SDEISELAVQGPKAEEILQKLTYTDLSEIKFFYFKD 176
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
IAGI C ++R GYTGEDG EI +P + + E ++ + +K AGLGARD+L
Sbjct: 177 NVKIAGIECLVSRTGYTGEDGFEIYMPNKYAVELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+AVQGP + ILQ+ T DLS + +F IAGI C ++R GYTGEDG EI +P +
Sbjct: 147 LAVQGPKAEEILQKLTYTDLSEIKFFYFKDNVKIAGIECLVSRTGYTGEDGFEIYMPNKY 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ E ++ + +K AGLGARD+L
Sbjct: 207 AVELWEKIIEVGKEYGLKPAGLGARDTL 234
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 15 RRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPS 72
+ + G F G + Q + G+ RK GF G+P R GYE+ A++Q++G +T+G S
Sbjct: 263 KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIP-RHGYEV-RADNQKIGYVTTGYFS 320
Query: 73 PSLKKNIAMGYIEPAYSKVGVELWVRVRDK 102
P+LKKNI + I+ Y+++G ++ + +R+K
Sbjct: 321 PTLKKNIGLALIDSKYAQLGNQIEIVIRNK 350
>sp|A4J2F6|GCST_DESRM Aminomethyltransferase OS=Desulfotomaculum reducens (strain MI-1)
GN=gcvT PE=3 SV=1
Length = 364
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 129/243 (53%), Gaps = 12/243 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY++HL+ G KMV F G+ MPVQY I A H RS +FDVSHM + ++G
Sbjct: 5 KRTPLYNIHLAAGAKMVEFGGWLMPVQYEG--IIAEHQAVRSAAGLFDVSHMGEIQISGP 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + D+ L PG S N QGG DDL+V + + LV NAS D
Sbjct: 63 TAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQYLLVVNASNTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+V+ Q + +Q +S E +A+QGP + ILQR T +DLS +
Sbjct: 123 FHWIVSQQV------PGVEIQNVS-EVTCQLALQGPQAEKILQRLTAVDLSHIKSFCFVY 175
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSLSGD 433
+ GI C ++R GYTGE G E+ P + +A++ + + ++ GLGARD+L +
Sbjct: 176 GAVEGIHCLISRTGYTGEAGFELYFPASHAERVWQAIMATGATDGLRPVGLGARDTLRFE 235
Query: 434 ITL 436
L
Sbjct: 236 ACL 238
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q ++G + + G G+P R GY IF Q VG ITSG +P+L KN
Sbjct: 267 FVGKEPLLKQKEAGTTYQLVGLEMIDRGIP-RQGYAIFK-EGQEVGWITSGTFAPTLGKN 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+ +GY+E ++ VG EL + VR+K + ++ K PF K
Sbjct: 325 MGLGYVEIPFADVGKELNIMVRNKPLKARIVKKPFYK 361
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
+A+QGP + ILQR T +DLS + + GI C ++R GYTGE G E+ P
Sbjct: 146 LALQGPQAEKILQRLTAVDLSHIKSFCFVYGAVEGIHCLISRTGYTGEAGFELYFPASHA 205
Query: 532 THIVEALL---SDEDVKLAGLGARDSL 555
+ +A++ + + ++ GLGARD+L
Sbjct: 206 ERVWQAIMATGATDGLRPVGLGARDTL 232
>sp|A0AIE9|GCST_LISW6 Aminomethyltransferase OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=gcvT PE=3 SV=1
Length = 362
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVKGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ + D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKKSETEYILVVNAANTEKDF 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV +++ D+ + +SA E G +A+QGP + IL + TD+DLSS+ +F
Sbjct: 124 EWMV------QNVRGDVTVTNVSA-EYGQLALQGPSAEKILSKLTDVDLSSISFFGFIED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI + + EA+L+ E V GLGARD+L
Sbjct: 177 VEVAGVKTIISRSGYTGEDGFEIYMASADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD+DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EYGQLALQGPSAEKILSKLTDVDLSSISFFGFIEDVEVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EA+L+ E V GLGARD+L
Sbjct: 202 ASADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F ND+ VG
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLTRKLVGIELIERGIP-RHDYPVF-LNDKEVGI 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+TSG SP+ NI + I+ AY+++G EL V +R+K+V K+ + PF K
Sbjct: 310 VTSGTQSPTFGTNIGLALIDTAYAELGQELEVGIRNKKVKAKIVQTPFYK 359
>sp|A4IQV5|GCST_GEOTN Aminomethyltransferase OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=gcvT PE=3 SV=1
Length = 365
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 132/238 (55%), Gaps = 13/238 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+ ++ +G K V F G+ MPVQ+ SI H R++ +FDVSHM + +V G
Sbjct: 3 KRTPLFPVYARYGAKTVEFGGWEMPVQFS--SIKEEHNAVRTRAGLFDVSHMGEIIVRGG 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV +L PG+ +L +E G DDL++ + ED LV NA+ + D
Sbjct: 61 GSLPFLQKLMTNDVAKLRPGRVQYTLMCDESAGTVDDLLIYQKGEDDYLLVVNAANTEKD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
+ D D+ L+ +SA E L+A+QGP + +LQ+ TD+DLS+L F
Sbjct: 121 FAWLSEHAD------GDVELEDVSA-ETALLALQGPAAERVLQKLTDMDLSALRPFSFQD 173
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 430
+A + ++R GYTGEDG E+ E + EA+L +++ V GLGARD+L
Sbjct: 174 GVEVASVKTLVSRTGYTGEDGFELYCQAEDAITLWEAILTAGAEDGVLPCGLGARDTL 231
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGY 516
D+ L+ +S E L+A+QGP + +LQ+ TD+DLS+L F +A + ++R GY
Sbjct: 131 DVELEDVSAE-TALLALQGPAAERVLQKLTDMDLSALRPFSFQDGVEVASVKTLVSRTGY 189
Query: 517 TGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
TGEDG E+ E + EA+L +++ V GLGARD+L
Sbjct: 190 TGEDGFELYCQAEDAITLWEAILTAGAEDGVLPCGLGARDTL 231
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G ++++ Q ++G R+ G G+P R GY +F A ++ G +T+G SP+LKKN
Sbjct: 267 FIGQAVLKQQKEAGPPRRLVGIEMIDKGIP-RHGYRVFAAGEE-AGFVTTGTQSPTLKKN 324
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
I + ++ + +G E+ V +R KR+ + PF K
Sbjct: 325 IGLALVKAEVAAIGQEVEVDIRGKRLKATIVPTPFYK 361
>sp|C1FTW3|GCST_CLOBJ Aminomethyltransferase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=gcvT PE=3 SV=1
Length = 370
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEAMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + +S + +A QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMDHKGDF-----DVEIVDVS-DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFEIYCKPEDAKELWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVDGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKELWHAILNAGKEEGAQPIGLGARDTL 234
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K++
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKKL 353
>sp|B1KWD5|GCST_CLOBM Aminomethyltransferase OS=Clostridium botulinum (strain Loch Maree
/ Type A3) GN=gcvT PE=3 SV=1
Length = 370
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEAMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + +S + +A+QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMDHKGDF-----DVEIADVS-DSIAQLALQGPLAEEILQKIVDVDLQEIKFFKLRRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LALQGPLAEEILQKIVDVDLQEIKFFKLRRDVLVDGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKGLWHAILNAGKEEGAQPIGLGARDTL 234
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELIDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKEL 353
>sp|B2A2T4|GCST_NATTJ Aminomethyltransferase OS=Natranaerobius thermophilus (strain ATCC
BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=gcvT PE=3 SV=1
Length = 365
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 129/244 (52%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPLYD+H GGK++ F G+ +PVQ+ I + TR + +FDVSHM + +V G
Sbjct: 5 QKTPLYDIHKERGGKIIDFGGWYLPVQF--TGIIDEVMTTRKEAGLFDVSHMGEIIVEGP 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+L+ + DV L PGK + E GG DD ++ K E+ L+ NA+ D
Sbjct: 63 KALEYLQKMVPNDVARLKPGKILYTPMCYENGGTVDDFLIYKMDENKFLLIVNAANTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+ + + + L+ LS +E G IA+QGP + ILQR TD L + +F
Sbjct: 123 FEWLQENNT------EGVELKNLS-DEYGQIAIQGPKAEKILQRLTDTPLKEIKFFNFKE 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSLSG 432
+ G+ ++R GYTGE+G EI + E+ + E + ++ +K GLGARD L
Sbjct: 176 DVDLDGVKALISRTGYTGENGFEIYIKAEETAKLWEKIEDAGENDGLKPIGLGARDVLRF 235
Query: 433 DITL 436
++ L
Sbjct: 236 EVCL 239
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 459 IHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYT 517
+ L+ LS +E G IA+QGP + ILQR TD L + +F + G+ ++R GYT
Sbjct: 134 VELKNLS-DEYGQIAIQGPKAEKILQRLTDTPLKEIKFFNFKEDVDLDGVKALISRTGYT 192
Query: 518 GEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
GE+G EI + E+ + E + ++ +K GLGARD L
Sbjct: 193 GENGFEIYIKAEETAKLWEKIEDAGENDGLKPIGLGARDVL 233
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 11 PGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITS 68
P + +T F G ++ +Q + G+ R GF G+P R Y I + Q +G ++S
Sbjct: 259 PFVKLNKTEDFLGKDVLVNQKEQGLERVLVGFEMIDRGIP-RTNY-ILMKDGQEIGFVSS 316
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
G SP+L K + +G+I+P + + G E+ V++R K K+ K PF +
Sbjct: 317 GSQSPTLDKALGLGFIKPEHDQEGNEIEVKIRKKTAKAKIVKTPFYR 363
>sp|A7FRV3|GCST_CLOB1 Aminomethyltransferase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=gcvT PE=3 SV=1
Length = 370
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEAMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + +S + +A QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMDHKGDF-----DVEIVDVS-DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKGLWHAILNAGKEEGAQPIGLGARDTL 234
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKEL 353
>sp|A8F8M9|GCST_THELT Aminomethyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301
/ DSM 14385 / TMO) GN=gcvT PE=3 SV=1
Length = 362
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 126/235 (53%), Gaps = 12/235 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ H+S G KM+ FAG+ MP+QY SI R V++FDVSHM + V G+
Sbjct: 2 RRTPLYESHVSLGAKMIDFAGWEMPLQY--TSINDEVATVRKNVALFDVSHMGEIFVEGE 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E+++ + L G+ ++ NE GGI DDL+ + E LV NA+ + D
Sbjct: 60 DTVEFVDYLLTNSFKNLRIGQVMYTVMCNEMGGIIDDLLTYRFGEKQAMLVVNAANIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
D +V +F +++ Q+ GLIAVQGPLS L+ D+ SL + T
Sbjct: 120 FDWIVNQSKQFNVTVRNLSDQY------GLIAVQGPLSERFLKTFVS-DIDSLSYYTFAS 172
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARD 428
++ G C ++R GYTGEDG EI + + LL ++ VK AGLGARD
Sbjct: 173 YSVFGKNCIVSRTGYTGEDGFEIYCHWDDTFTVWNELLQRGNNFGVKPAGLGARD 227
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
++ GLIAVQGPLS L+ D+ SL + T ++ G C ++R GYTGEDG EI
Sbjct: 139 DQYGLIAVQGPLSERFLKTFVS-DIDSLSYYTFASYSVFGKNCIVSRTGYTGEDGFEIYC 197
Query: 527 PGEQCTHIVEALL---SDEDVKLAGLGARD 553
+ + LL ++ VK AGLGARD
Sbjct: 198 HWDDTFTVWNELLQRGNNFGVKPAGLGARD 227
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + Q + G+ ++ G + I R G +F ++RVG +TSG SP+L+K +
Sbjct: 263 FIGKDSLIKQKELGLQKRIRGLEISDRRIARHGMYVFKG-EKRVGVVTSGTFSPTLEKPV 321
Query: 80 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
A+ + K+ E+ V +R +V + K+PF +
Sbjct: 322 ALAMLSSEI-KISDEIEVDIRGSKVKAMIVKLPFYR 356
>sp|Q5KX76|GCST_GEOKA Aminomethyltransferase OS=Geobacillus kaustophilus (strain HTA426)
GN=gcvT PE=3 SV=1
Length = 364
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPL+ ++ G K + F G+ MPVQ+ SI H R++ +FDVSHM + VV G+
Sbjct: 3 KRTPLFSVYARCGAKTIEFGGWEMPVQFS--SIKEEHEAVRTRAGLFDVSHMGEIVVRGR 60
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV +L PG+ +L E GG DDL++ + E+ LV NA+ + D
Sbjct: 61 GSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYLLVVNAANTEKD 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
+ + D+ LQ +S+E L A+QGP + +LQR TD DL++L F +
Sbjct: 121 FAWLSG------HVEGDVELQDVSSETAQL-ALQGPAAERVLQRLTDFDLAALRPFSFAD 173
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSLSG 432
++G+ ++R GYTGEDG E+ E + EA+L+ + V GLGARD+L
Sbjct: 174 GVEVSGVKALVSRTGYTGEDGFELYCKAEDAAALWEAILAAGARDSVLPCGLGARDTLRF 233
Query: 433 DITL 436
+ L
Sbjct: 234 EACL 237
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGY 516
D+ LQ +S E L A+QGP + +LQR TD DL++L F + ++G+ ++R GY
Sbjct: 131 DVELQDVSSETAQL-ALQGPAAERVLQRLTDFDLAALRPFSFADGVEVSGVKALVSRTGY 189
Query: 517 TGEDGVEISVPGEQCTHIVEALLSD---EDVKLAGLGARDSL 555
TGEDG E+ E + EA+L+ + V GLGARD+L
Sbjct: 190 TGEDGFELYCKAEDAAALWEAILAAGARDSVLPCGLGARDTL 231
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K +ET F G ++++ Q + G R+ G G+P R GY +F A+ + VG
Sbjct: 255 LGFAVKTEKETP-FIGQAVLKRQKEEGPPRRLVGIEMIDRGIP-RHGYLVF-ADGEEVGF 311
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
+T+G SP+LKKNI + ++ + +G E+ V +R KR+ + +PF +
Sbjct: 312 VTTGTQSPTLKKNIGLALVKADVAAIGREVEVDIRGKRLKANIVPIPFYR 361
>sp|B1IEV3|GCST_CLOBK Aminomethyltransferase OS=Clostridium botulinum (strain Okra / Type
B1) GN=gcvT PE=3 SV=1
Length = 370
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 133/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEVMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K E+ FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINILKDNEVLYTFMCNEDGGVIDDLLVYKFAENEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + ++ +A+QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMDHKGDF-----DVEI-VDESDSIAQLALQGPLAEEILQKIVDIDLQEIKFFKLKRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E V+ GLGARD+L +
Sbjct: 179 LVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGVQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LALQGPLAEEILQKIVDIDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E V+ GLGARD+L
Sbjct: 207 AKGLWHAILNAGKEEGVQPIGLGARDTL 234
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKEL 353
>sp|B8FT33|GCST_DESHD Aminomethyltransferase OS=Desulfitobacterium hafniense (strain
DCB-2 / DSM 10664) GN=gcvT PE=3 SV=1
Length = 365
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 124/237 (52%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ H G K++ F G+ MPVQY V H RSK +FDVSHM + + GK
Sbjct: 5 KRTPLYEQHRRAGAKLIDFGGWEMPVQYAGV--IEEHKAVRSKAGLFDVSHMGEVELKGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV + + S GG+ DDL+V + + LV NAS D
Sbjct: 63 DSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFLLVVNASNTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M A + F +I L+ S + L A+QGP + ILQ+ T +DL+ + + +
Sbjct: 123 FAWMQAQAEGF-----EISLENRSGDFAQL-ALQGPWAEKILQKLTSMDLAQINYYWFKH 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+ G+ C ++R GYTGEDG EI +P E + E +L E V+ GLGARD+L
Sbjct: 177 GEVDGVLCLISRTGYTGEDGFEIYLPPEHAPRMWERILEVGGSEGVQPIGLGARDTL 233
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
+A+QGP + ILQ+ T +DL+ + + + + G+ C ++R GYTGEDG EI +P E
Sbjct: 147 LALQGPWAEKILQKLTSMDLAQINYYWFKHGEVDGVLCLISRTGYTGEDGFEIYLPPEHA 206
Query: 532 THIVEALLS---DEDVKLAGLGARDSL 555
+ E +L E V+ GLGARD+L
Sbjct: 207 PRMWERILEVGGSEGVQPIGLGARDTL 233
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 17 ETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
E F G + +Q + GV RK G I + + +G ITSG SP+L
Sbjct: 264 EKDNFIGKEALSAQKEKGVPRKLVGLEMIERGIARSHYPLQKEGKEIGFITSGSFSPTLN 323
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
KNIA+G I P Y+++G L V +R K V ++ F K
Sbjct: 324 KNIALGLIPPEYAQIGETLDVIIRGKAVKARIIPSLFYK 362
>sp|C1D0F7|GCST_DEIDV Aminomethyltransferase OS=Deinococcus deserti (strain VCD115 / DSM
17065 / LMG 22923) GN=gcvT PE=3 SV=1
Length = 357
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 126/238 (52%), Gaps = 11/238 (4%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
+A +RTPL+ HL G +MVPF G+ MPVQY + A H R VFDVSHM + +
Sbjct: 7 TALKRTPLHAAHLRAGARMVPFGGWDMPVQYSG--LKAEHQAVRESAGVFDVSHMGEFRI 64
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRR 313
G+ +L+ + DV +L PG+ + N++GG+ DD+ + E+ +V NAS
Sbjct: 65 QGEGALAFLQHVTPNDVSKLRPGRAQYNWLPNDRGGLVDDIYIYMVGENEYLMVVNAS-- 122
Query: 314 KVDMDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPLSSTILQRHTDLDLSSLYFM 372
+D D ++L + + +R L+AVQGP ++ +LQ H D+DL S
Sbjct: 123 NIDKDWA-----HLQTLAAGFGVTLTNESDRWALLAVQGPKAAEVLQPHVDVDLGSKKKN 177
Query: 373 TSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
P + G L R GYTGEDG E+ + + + + L++ V AGLGARD+L
Sbjct: 178 AYFPARLFGFNVHLARTGYTGEDGFEVFIDASEAETVWDKLMAI-GVTPAGLGARDTL 234
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
L+AVQGP ++ +LQ H D+DL S P + G L R GYTGEDG E+ + +
Sbjct: 151 LLAVQGPKAAEVLQPHVDVDLGSKKKNAYFPARLFGFNVHLARTGYTGEDGFEVFIDASE 210
Query: 531 CTHIVEALLSDEDVKLAGLGARDSL 555
+ + L++ V AGLGARD+L
Sbjct: 211 AETVWDKLMAI-GVTPAGLGARDTL 234
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 31 IKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSK 90
++ +K G VP+R GY + + Q VG +TSG SP+L IA+ ++ A +
Sbjct: 273 LQQPAQQKLIGLKLDKVPVREGYPVLQSG-QVVGHVTSGTSSPTLGHPIALALVQ-AGAA 330
Query: 91 VGVELWVRVRDKRVDVKVTKMPFVKS 116
+ V VR K T +PF K+
Sbjct: 331 DATDFEVEVRGKAHPATRTDVPFYKA 356
>sp|C3L1M5|GCST_CLOB6 Aminomethyltransferase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=gcvT PE=3 SV=1
Length = 370
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 131/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + V GK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEATVKGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+++++ + D++ L + + NE GG+ DDL+V K ED FLV NAS + D+
Sbjct: 65 QKFVQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + +S + +A QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WILDHKGDF-----DVEIVDVS-DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKGLWHAILNAGKEEGAQPIGLGARDTL 234
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q GV+RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGVTRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKEL 353
>sp|Q24TH3|GCST_DESHY Aminomethyltransferase OS=Desulfitobacterium hafniense (strain Y51)
GN=gcvT PE=3 SV=1
Length = 365
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ H G K++ F G+ MPVQY V H RSK +FDVSHM + + GK
Sbjct: 5 KRTPLYEQHRRAGAKLIDFGGWEMPVQYAGV--IEEHKAVRSKAGLFDVSHMGEVELKGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV + + S GG+ DDL+V + + LV NA+ D
Sbjct: 63 DSLAFLQYLLTNDVSRIQDNQIQYSPMCTSAGGVVDDLLVYRYSREHFLLVVNAANTDKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M A + F +I L+ S + L A+QGP + ILQ+ T +DL+ + + +
Sbjct: 123 FAWMQAQAEGF-----EISLENRSGDFAQL-ALQGPWAEKILQKLTSMDLAQINYYWFKH 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSL 430
+ G+ C ++R GYTGEDG EI +P E + E +L E V+ GLGARD+L
Sbjct: 177 GEVDGVLCLISRTGYTGEDGFEIYLPPEHAPRMWERILEVGGSEGVQPIGLGARDTL 233
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 531
+A+QGP + ILQ+ T +DL+ + + + + G+ C ++R GYTGEDG EI +P E
Sbjct: 147 LALQGPWAEKILQKLTSMDLAQINYYWFKHGEVDGVLCLISRTGYTGEDGFEIYLPPEHA 206
Query: 532 THIVEALLS---DEDVKLAGLGARDSL 555
+ E +L E V+ GLGARD+L
Sbjct: 207 PRMWERILEVGGSEGVQPIGLGARDTL 233
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 17 ETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
E F G + +Q + GV RK G I + + +G ITSG SP+L
Sbjct: 264 EKDNFIGKEALSAQKEKGVPRKLVGLEMIERGIARSHYPLQKEGKEIGFITSGSFSPTLN 323
Query: 77 KNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
KNIA+G I P Y+++G L V +R K V ++ F K
Sbjct: 324 KNIALGLIPPEYAQIGETLDVIIRGKAVKARIIPSLFYK 362
>sp|Q92C06|GCST_LISIN Aminomethyltransferase OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=gcvT PE=3 SV=1
Length = 362
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 131/234 (55%), Gaps = 11/234 (4%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP++ L+ +G K + F G+ +PVQ+ I A H R+ +FDVSHM + +V G
Sbjct: 6 KTPIHPLYAKYGAKTIDFGGWDLPVQFAG--IKAEHEAVRTDAGLFDVSHMGEILVEGPD 63
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
+L+ + D+ ++ GK ++ E GG DDL+V K E LV NA+ + D
Sbjct: 64 STSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTEKDY 123
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRP 376
+ MV +++ D+ ++ S+ E G +A+QGP + IL + TD DLSS+ +F
Sbjct: 124 EWMV------QNIVGDVTVKNASS-EFGQLALQGPNAEKILSKLTDADLSSISFFGFIED 176
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+ ++R+GYTGEDG EI + + EA+L+ E V GLGARD+L
Sbjct: 177 ADVAGVKTIISRSGYTGEDGFEIYMQSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E G +A+QGP + IL + TD DLSS+ +F +AG+ ++R+GYTGEDG EI +
Sbjct: 142 EFGQLALQGPNAEKILSKLTDADLSSISFFGFIEDADVAGVKTIISRSGYTGEDGFEIYM 201
Query: 527 PGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ EA+L+ E V GLGARD+L
Sbjct: 202 QSADAGKVFEAILA-EGVAPIGLGARDTL 229
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 8 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGA 65
L F K ++E F G + Q ++G++RK G G+P R Y +F ND+ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKQALIKQKEAGLTRKLVGIELIERGIP-RHDYPVF-LNDKEIGV 309
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
ITSG SP+L NI + I+ AY+++ EL V +R+K+V KV + PF K
Sbjct: 310 ITSGTQSPTLGTNIGLALIDTAYTELDQELEVGIRNKKVKAKVVQTPFYK 359
>sp|A7GB83|GCST_CLOBL Aminomethyltransferase OS=Clostridium botulinum (strain Langeland /
NCTC 10281 / Type F) GN=gcvT PE=3 SV=1
Length = 370
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 131/242 (54%), Gaps = 12/242 (4%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL ++ +GGK+V FAG+ +P Q+ H R K +FDVSHM + +VTGK
Sbjct: 7 TPLRGVYEEYGGKIVDFAGYELPTQFKG--FLHEHHTVREKAGLFDVSHMGEAMVTGKDA 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
++++ + D++ L + + NE GG+ DDL+V K D FLV NAS + D+
Sbjct: 65 GKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAGDEFFLVINASNKDKDVK 124
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
++ + F D+ + +S + +A QGPL+ ILQ+ D+DL + +F R
Sbjct: 125 WIMGHKGDF-----DVEIVDVS-DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLSGDI 434
+ G C ++R GYTGEDG EI E + A+L+ +E + GLGARD+L +
Sbjct: 179 LVDGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEGAQPIGLGARDTLRFEA 238
Query: 435 TL 436
+L
Sbjct: 239 SL 240
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A QGPL+ ILQ+ D+DL + +F R + G C ++R GYTGEDG EI E
Sbjct: 147 LAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVDGKKCLVSRTGYTGEDGFEIYCKPED 206
Query: 531 CTHIVEALLS---DEDVKLAGLGARDSL 555
+ A+L+ +E + GLGARD+L
Sbjct: 207 AKGLWHAILNAGKEEGAQPIGLGARDTL 234
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G + Q G++RK GF G+P R GYE+ + + +G +T+G SP+L K
Sbjct: 270 FIGKDALIKQKAEGITRKLVGFELLDKGIP-RHGYEVIK-DGKVIGHVTTGYKSPTLNKA 327
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRV 104
I + +E YSK+G E ++VR K +
Sbjct: 328 IGLALVEEQYSKIGTEFNIKVRKKEL 353
>sp|B0TZJ8|GCST_FRAP2 Aminomethyltransferase OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=gcvT PE=3 SV=1
Length = 358
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 138/278 (49%), Gaps = 25/278 (8%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TPLY+ HL+ KMV F+G+SMP+ YG S H + R VFDVSHML + GK
Sbjct: 3 KTPLYESHLAANAKMVDFSGWSMPINYG--SQIQEHNNVRENCGVFDVSHMLAVDIQGKD 60
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
E++L I DV +L+ GK N + GI DDLI K ++ +V NA R+ D+
Sbjct: 61 AEKFLRHILANDVAKLEAGKAQYGCMLNHEAGIVDDLITYKIDSENFRIVVNAGNRESDV 120
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
F+ +D+ ++ + ++AVQGP + I+ +HT + +P
Sbjct: 121 AW-------FRENSQDLDVKITPQQNLAIVAVQGPKAVEIV-KHTVTTEVAEEIAKLKPF 172
Query: 378 TIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL------ 430
T R GYTGEDG EI +P +Q + LL + + AGLGARD+L
Sbjct: 173 TFKFFSNWMFARTGYTGEDGFEIMLPADQVADFWDNLLEN-GAEPAGLGARDTLRLEAGM 231
Query: 431 ----SGDITLNTPVPHG---SLKLSNDRFKSLGKDIHL 461
S T TP+ G S+ LS++ +GK +L
Sbjct: 232 HLYGSDMNTTTTPLERGLGWSVDLSDENRDFIGKKAYL 269
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
F+ +D+ ++ + ++AVQGP + I+ +HT + +P T
Sbjct: 123 FRENSQDLDVKITPQQNLAIVAVQGPKAVEIV-KHTVTTEVAEEIAKLKPFTFKFFSNWM 181
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
R GYTGEDG EI +P +Q + LL + + AGLGARD+L
Sbjct: 182 FARTGYTGEDGFEIMLPADQVADFWDNLLEN-GAEPAGLGARDTL 225
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 17 ETGGFPGASIIQSQIKSGVSRKRTG--FTSTGVPIRPGYEIFNANDQRVGAITSGCPSPS 74
E F G ++ G++ K TG S GV +R G EI N ++ G ITSG SP+
Sbjct: 258 ENRDFIGKKAYLTKKSHGITTKWTGVVLKSKGV-LRAGQEIDFDNGEK-GYITSGSFSPT 315
Query: 75 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKS 116
LK IA+ Y+ K G V +R K ++V++ K FVK+
Sbjct: 316 LKVAIALAYV----PKEGANPIVNIRGKELEVELVKAKFVKN 353
>sp|A7GSN8|GCST_BACCN Aminomethyltransferase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=gcvT PE=3 SV=1
Length = 366
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
QRTPL+D++ +GGK + F G+ +PVQ+ SI H R+ +FDVSHM + VTG
Sbjct: 5 QRTPLFDVYAKYGGKTIDFGGWELPVQFS--SIKEEHEAVRTAAGLFDVSHMGEVEVTGA 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV L G + E GG DDL++ K E+ LV NAS + D
Sbjct: 63 DSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+ + + + D + +S E +A+QGP + ILQ+ DL + +F
Sbjct: 123 YEWLAS------HVIGDTKVVNVS-NEIAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKN 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSLSG 432
+ GIP ++R GYTGEDG EI E I E LL ++ +K GLGARD+L
Sbjct: 176 DVLVDGIPALVSRTGYTGEDGFEIYCKSEDAIKIWEKLLEVGEEDSLKPCGLGARDTLRF 235
Query: 433 DITL 436
+ TL
Sbjct: 236 EATL 239
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + ILQ+ DL + +F + GIP ++R GYTGEDG EI E
Sbjct: 146 LAIQGPKAEGILQKVVSEDLKEIKFFKFKNDVLVDGIPALVSRTGYTGEDGFEIYCKSED 205
Query: 531 CTHIVEALL---SDEDVKLAGLGARDSL 555
I E LL ++ +K GLGARD+L
Sbjct: 206 AIKIWEKLLEVGEEDSLKPCGLGARDTL 233
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 10 FPGKRRRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAIT 67
F K +E F G +++ ++G RK G G+P R Y ++ ++++G +T
Sbjct: 259 FAVKTNKE-ADFFGKEVLKEYKENGAPRKLVGIEVIERGIP-RTHYPVY-VGEEKIGEVT 315
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
SG SP+LKK+I + I+ Y+ + E+ + +R KRV V PF K
Sbjct: 316 SGTQSPTLKKSIGLALIDVKYAAIDTEVEIEIRKKRVKAVVVPTPFYK 363
>sp|O86567|GCST_STRCO Aminomethyltransferase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=gcvT PE=3 SV=1
Length = 372
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 122/237 (51%), Gaps = 11/237 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RT L H + G M FAG+ MP++YG S H+ R++ +FD+SHM + VTG
Sbjct: 7 RRTALDATHRALGATMTDFAGWDMPLRYG--SEREEHVAVRTRAGLFDLSHMGEITVTGP 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E L V ++ + PG+ ++ E GGI DDLIV + E +V+NAS +V
Sbjct: 65 QAAELLNFALVGNIGTVKPGRARYTMICREDGGILDDLIVYRLEEAEYMVVANASNAQVV 124
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+D + F + +D + L+AVQGP S IL TD DL L + P
Sbjct: 125 LDALTERAAGFDAEVRDDRDAY------ALLAVQGPESPGILASLTDADLDGLKYYAGLP 178
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL-SDEDVKL--AGLGARDSL 430
T+AG+P + R GYTGEDG E+ V E + +AL + E L GL RD+L
Sbjct: 179 GTVAGVPALIARTGYTGEDGFELFVKPEHAVGLWQALTGAGEAAGLIPCGLSCRDTL 235
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 471 LIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
L+AVQGP S IL TD DL L + P T+AG+P + R GYTGEDG E+ V E
Sbjct: 148 LLAVQGPESPGILASLTDADLDGLKYYAGLPGTVAGVPALIARTGYTGEDGFELFVKPEH 207
Query: 531 CTHIVEALL-SDEDVKL--AGLGARDSL 555
+ +AL + E L GL RD+L
Sbjct: 208 AVGLWQALTGAGEAAGLIPCGLSCRDTL 235
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 19 GGFPGASIIQSQIKSGVSRK---RTGFTSTG--VPIRPGYEIFNANDQRVGAITSGCPSP 73
G F G + + + SR G + G VP R GY + A + +G +TSG PSP
Sbjct: 269 GDFVGRAALTEAAERAASRPPRVLVGLVAEGRRVP-RSGYRVV-AGGEVIGEVTSGAPSP 326
Query: 74 SLKKNIAMGYIEPAYSKVGVE-LWVRVRDKRVDVKVTKMPFVK 115
+L + IAM Y++PA++ G E + V +R +V +PF K
Sbjct: 327 TLGRPIAMAYVDPAHAAPGTEGVGVDIRGSHEPYEVVALPFYK 369
>sp|B9DNN7|GCST_STACT Aminomethyltransferase OS=Staphylococcus carnosus (strain TM300)
GN=gcvT PE=3 SV=1
Length = 364
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 129/235 (54%), Gaps = 9/235 (3%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD + K+V F G++MPVQ+ SI H R + +FDVSHM + ++ GK
Sbjct: 6 KKTPLYDRFVESNAKIVEFGGWAMPVQFS--SIKEEHNAVREVMGIFDVSHMGEVLIEGK 63
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
++++ I D +L K + N++GGI DDLI K LV NA+ + D
Sbjct: 64 DASDFIQYILSNDTDQLTDNKAQYTALCNDKGGIIDDLITYKLDNQKYLLVVNAANTEKD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSR 375
+ + + + F D+ ++ +S ++ G +AVQGP + + D+D+S + F +
Sbjct: 124 YNWINSHSENF-----DVKVENVS-DQYGQLAVQGPEARDYVGSLVDVDVSEMKPFDFKK 177
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
TI G L+++GYTGEDG EI + I + LL +E++ AGLGARD+L
Sbjct: 178 DVTIFGKNIILSQSGYTGEDGFEIYCNSDDVVDIWDGLLENENLVPAGLGARDTL 232
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLY-FMTSRPCTIAGIPCTLTRAGY 516
D+ ++ +S ++ G +AVQGP + + D+D+S + F + TI G L+++GY
Sbjct: 135 DVKVENVS-DQYGQLAVQGPEARDYVGSLVDVDVSEMKPFDFKKDVTIFGKNIILSQSGY 193
Query: 517 TGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TGEDG EI + I + LL +E++ AGLGARD+L
Sbjct: 194 TGEDGFEIYCNSDDVVDIWDGLLENENLVPAGLGARDTL 232
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 78
F G +++ Q ++G + + G G+P R GY++ + + ++G +TSG SP+ K
Sbjct: 268 FIGKEVLKEQKENGSAERTIGLEMLDKGIP-RTGYDVLDLDGNKIGVVTSGTQSPATGKG 326
Query: 79 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTK 110
IA+ I ++G E+ V++R ++V K+ K
Sbjct: 327 IALAIINRDEFEMGREVLVQIRKRQVKAKIVK 358
>sp|B9K6R7|GCST_THENN Aminomethyltransferase OS=Thermotoga neapolitana (strain ATCC 49049
/ DSM 4359 / NS-E) GN=gcvT PE=3 SV=1
Length = 363
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 125/235 (53%), Gaps = 11/235 (4%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ H++ G KMV FAG+ MP+ Y SI + R V VFDVSHM + VV G+
Sbjct: 2 KRTPLYERHVALGAKMVDFAGWIMPLYYS--SIFEEVMAVRKSVGVFDVSHMGEIVVEGQ 59
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+++ + D + GK ++ NE GGI DDL+V + + +V NA+ + D
Sbjct: 60 ETVDFVNFLVTNDFSAIPEGKAMYTVMCNETGGIVDDLVVYRISHEKAIMVVNAANIEKD 119
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + F +++ ++E L+A QGP S LQR D+DL + + + +
Sbjct: 120 YEWIKVHAKNFNVEVRNV------SDETALVAFQGPKSQETLQRVVDIDLEGIGYYSFQW 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARD 428
+ G ++R GYTGEDG E+ + E I + L+ + D K AGLGARD
Sbjct: 174 GRLDGERVLVSRTGYTGEDGFELMMNAESAAKIWDTLVEIAGNVDGKPAGLGARD 228
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
+E L+A QGP S LQR D+DL + + + + + G ++R GYTGEDG E+ +
Sbjct: 139 DETALVAFQGPKSQETLQRVVDIDLEGIGYYSFQWGRLDGERVLVSRTGYTGEDGFELMM 198
Query: 527 PGEQCTHIVEALLS---DEDVKLAGLGARD 553
E I + L+ + D K AGLGARD
Sbjct: 199 NAESAAKIWDTLVEIAGNVDGKPAGLGARD 228
Score = 38.9 bits (89), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 30 QIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAY 88
++K V RK +G I R GY + + VG ITSG SP+L K+IA+ +
Sbjct: 272 KLKEKVERKLVALELSGRRIARKGYTVLKEGKE-VGKITSGNFSPTLGKSIALALVSRCV 330
Query: 89 SKVGVELWVRVRDKRVDVKVTKMPFVK 115
K G L V K V+ V K PF +
Sbjct: 331 -KTGDRLEVVFPGKNVEAHVVKKPFYR 356
>sp|B7IXL4|GCST_BACC2 Aminomethyltransferase OS=Bacillus cereus (strain G9842) GN=gcvT
PE=3 SV=1
Length = 366
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 125/244 (51%), Gaps = 13/244 (5%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
QRTPL+D++ +GGK + F G+ +PVQ+ SI H R+ +FDVSHM + V G
Sbjct: 5 QRTPLFDVYAKYGGKTIDFGGWELPVQFS--SIKEEHEAVRTAAGLFDVSHMGEVEVKGV 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV L G + E GG DDL++ K E+ LV NAS + D
Sbjct: 63 DSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+ + + +G + S E +A+QGP + ILQ+ DL + +F
Sbjct: 123 YEWLAS-----HVIGDATVVNVSS--EVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKN 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSLSG 432
+ GIP ++R GYTGEDG EI E + E LL ++E +K GLGARD+L
Sbjct: 176 NILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRF 235
Query: 433 DITL 436
+ TL
Sbjct: 236 EATL 239
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 526
E +A+QGP + ILQ+ DL + +F + GIP ++R GYTGEDG EI
Sbjct: 142 EVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNNILVDGIPALVSRTGYTGEDGFEIYC 201
Query: 527 PGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
E + E LL ++E +K GLGARD+L
Sbjct: 202 KSEDAAKLWEKLLEVGAEEGLKACGLGARDTL 233
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 10 FPGKRRRETGGFPGASIIQSQIKSGVSRKRTGF--TSTGVPIRPGYEIFNANDQRVGAIT 67
F K +E F G + ++ Q ++G RK G G+P R Y +F ++++G +T
Sbjct: 259 FAVKTNKEAD-FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVF-IGEEKIGEVT 315
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVK 115
SG SP+LKK+I + I+ Y+ V E+ + +R+KRV V PF K
Sbjct: 316 SGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKRVKAVVVPTPFYK 363
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,633,769
Number of Sequences: 539616
Number of extensions: 9183028
Number of successful extensions: 24086
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 21341
Number of HSP's gapped (non-prelim): 1202
length of query: 555
length of database: 191,569,459
effective HSP length: 123
effective length of query: 432
effective length of database: 125,196,691
effective search space: 54084970512
effective search space used: 54084970512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)