Your job contains 1 sequence.
>psy4854
MDIYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNAND
QRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFVKSNYYT
PPKIRKVKKKGDEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHTPPKYFLKFLSFF
SGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKV
SVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTL
EDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQR
HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVK
LAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSS
TILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS
DEDVKLAGLGARDSL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4854
(555 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-041010-114 - symbol:amt "aminomethyltransfe... 622 9.0e-61 1
FB|FBgn0032287 - symbol:CG6415 species:7227 "Drosophila m... 603 9.3e-59 1
WB|WBGene00017765 - symbol:gcst-1 species:6239 "Caenorhab... 582 1.1e-58 2
UNIPROTKB|I3LIR4 - symbol:AMT "Aminomethyltransferase" sp... 594 8.4e-58 1
UNIPROTKB|P25285 - symbol:AMT "Aminomethyltransferase, mi... 590 2.2e-57 1
UNIPROTKB|P48728 - symbol:AMT "Aminomethyltransferase, mi... 589 2.8e-57 1
UNIPROTKB|H0Y695 - symbol:AMT "Aminomethyltransferase" sp... 589 2.8e-57 1
MGI|MGI:3646700 - symbol:Amt "aminomethyltransferase" spe... 588 3.6e-57 1
RGD|1359408 - symbol:Amt "aminomethyltransferase" species... 586 5.9e-57 1
UNIPROTKB|Q9TSZ7 - symbol:AMT "Aminomethyltransferase, mi... 580 2.5e-56 1
UNIPROTKB|P28337 - symbol:AMT "Aminomethyltransferase, mi... 565 9.9e-55 1
UNIPROTKB|P49364 - symbol:GDCST "Aminomethyltransferase, ... 525 1.7e-50 1
TAIR|locus:2008900 - symbol:AT1G11860 species:3702 "Arabi... 517 1.2e-49 1
DICTYBASE|DDB_G0292326 - symbol:gcvT "aminomethyltransfer... 509 8.5e-49 1
TIGR_CMR|CPS_3841 - symbol:CPS_3841 "glycine cleavage sys... 489 1.1e-46 1
POMBASE|SPAC31G5.14 - symbol:gcv1 "glycine decarboxylase ... 471 9.1e-45 1
ASPGD|ASPL0000056788 - symbol:AN1198 species:162425 "Emer... 438 2.8e-41 1
CGD|CAL0006098 - symbol:GCV1 species:5476 "Candida albica... 417 4.8e-39 1
UNIPROTKB|Q5AC31 - symbol:GCV1 "Aminomethyltransferase" s... 417 4.8e-39 1
TIGR_CMR|SPO_A0057 - symbol:SPO_A0057 "glycine cleavage s... 407 5.5e-38 1
SGD|S000002426 - symbol:GCV1 "T subunit of the mitochondr... 403 1.5e-37 1
UNIPROTKB|C9JXJ4 - symbol:AMT "Aminomethyltransferase, mi... 397 6.3e-37 1
TIGR_CMR|CHY_0489 - symbol:CHY_0489 "glycine cleavage sys... 382 2.4e-35 1
UNIPROTKB|B4DGG9 - symbol:AMT "Aminomethyltransferase" sp... 380 4.0e-35 1
TIGR_CMR|BA_4449 - symbol:BA_4449 "glycine cleavage syste... 345 3.8e-31 1
UNIPROTKB|P64220 - symbol:gcvT "Aminomethyltransferase" s... 303 2.1e-26 1
TIGR_CMR|GSU_0375 - symbol:GSU_0375 "glycine cleavage sys... 281 5.5e-24 1
TIGR_CMR|CPS_1274 - symbol:CPS_1274 "glycine cleavage sys... 280 7.1e-24 1
UNIPROTKB|P27248 - symbol:gcvT species:83333 "Escherichia... 277 1.5e-23 1
TIGR_CMR|CBU_1716 - symbol:CBU_1716 "glycine cleavage sys... 272 5.4e-23 1
TIGR_CMR|SO_0779 - symbol:SO_0779 "glycine cleavage syste... 254 9.5e-20 1
GENEDB_PFALCIPARUM|PF13_0345 - symbol:PF13_0345 "aminomet... 239 1.8e-17 1
UNIPROTKB|Q8I6T0 - symbol:PF13_0345 "Aminomethyltransfera... 239 1.8e-17 1
ASPGD|ASPL0000076695 - symbol:AN8654 species:162425 "Emer... 176 7.8e-10 2
UNIPROTKB|F1NBJ7 - symbol:SARDH "Uncharacterized protein"... 171 3.4e-09 1
ZFIN|ZDB-GENE-040426-996 - symbol:sardh "sarcosine dehydr... 167 9.4e-09 1
TIGR_CMR|SPO_A0310 - symbol:SPO_A0310 "aminomethyl transf... 163 2.1e-08 1
TIGR_CMR|CPS_2480 - symbol:CPS_2480 "sarcosine oxidase, a... 156 1.7e-07 1
TIGR_CMR|CPS_4034 - symbol:CPS_4034 "sarcosine oxidase, a... 156 1.7e-07 1
TIGR_CMR|SPO_2436 - symbol:SPO_2436 "FAD dependent oxidor... 154 2.1e-07 1
UNIPROTKB|Q48CP0 - symbol:soxA "Sarcosine oxidase, alpha ... 154 2.7e-07 1
UNIPROTKB|E1BB28 - symbol:SARDH "Uncharacterized protein"... 153 3.1e-07 1
UNIPROTKB|E2R5G7 - symbol:SARDH "Uncharacterized protein"... 151 5.1e-07 1
FB|FBgn0034276 - symbol:CG6385 species:7227 "Drosophila m... 159 6.5e-07 2
UNIPROTKB|Q4K4P9 - symbol:soxA "Sarcosine oxidase, alpha ... 150 7.4e-07 1
TIGR_CMR|SPO_1579 - symbol:SPO_1579 "aminomethyl transfer... 144 7.5e-07 1
UNIPROTKB|B4DPI2 - symbol:SARDH "Sarcosine dehydrogenase,... 145 1.8e-06 1
UNIPROTKB|F1S0R9 - symbol:SARDH "Uncharacterized protein"... 146 1.8e-06 1
TIGR_CMR|SPO_3396 - symbol:SPO_3396 "FAD dependent oxidor... 145 2.0e-06 1
TIGR_CMR|SPO_0635 - symbol:SPO_0635 "aminomethyl transfer... 145 2.0e-06 1
UNIPROTKB|Q9UL12 - symbol:SARDH "Sarcosine dehydrogenase,... 145 2.3e-06 1
ZFIN|ZDB-GENE-080227-8 - symbol:dmgdh "dimethylglycine de... 144 2.8e-06 1
TIGR_CMR|SPO_1592 - symbol:SPO_1592 "aminomethyl transfer... 142 4.2e-06 1
TIGR_CMR|SPO_0207 - symbol:SPO_0207 "aminomethyl transfer... 149 5.8e-06 2
MGI|MGI:2183102 - symbol:Sardh "sarcosine dehydrogenase" ... 139 1.0e-05 1
MGI|MGI:1921379 - symbol:Dmgdh "dimethylglycine dehydroge... 137 1.6e-05 1
TIGR_CMR|SPO_2345 - symbol:SPO_2345 "sarcosine oxidase, a... 136 2.4e-05 1
RGD|620453 - symbol:Dmgdh "dimethylglycine dehydrogenase"... 135 2.6e-05 1
UNIPROTKB|Q63342 - symbol:Dmgdh "Dimethylglycine dehydrog... 135 2.6e-05 1
RGD|621125 - symbol:Sardh "sarcosine dehydrogenase" speci... 134 3.6e-05 1
UNIPROTKB|Q64380 - symbol:Sardh "Sarcosine dehydrogenase,... 134 3.6e-05 1
UNIPROTKB|D4A9I9 - symbol:Sardh "Sarcosine dehydrogenase,... 134 3.6e-05 1
TIGR_CMR|SPO_3400 - symbol:SPO_3400 "aminomethyl transfer... 133 4.0e-05 1
UNIPROTKB|Q5SYV2 - symbol:SARDH "Sarcosine dehydrogenase,... 127 5.4e-05 1
UNIPROTKB|F1MDJ6 - symbol:DMGDH "Uncharacterized protein"... 129 0.00012 1
UNIPROTKB|B4E1J9 - symbol:DMGDH "cDNA FLJ50354, highly si... 122 0.00022 1
TIGR_CMR|SPO_1746 - symbol:SPO_1746 "sarcosine oxidase, a... 125 0.00037 1
UNIPROTKB|F8W6P8 - symbol:DMGDH "Dimethylglycine dehydrog... 122 0.00039 1
TIGR_CMR|SPO_1648 - symbol:SPO_1648 "aminomethyl transfer... 119 0.00041 1
UNIPROTKB|Q8TCC6 - symbol:DMGDH "Dimethylglycine dehydrog... 122 0.00043 1
UNIPROTKB|Q9UI17 - symbol:DMGDH "Dimethylglycine dehydrog... 122 0.00067 1
>ZFIN|ZDB-GENE-041010-114 [details] [associations]
symbol:amt "aminomethyltransferase" species:7955
"Danio rerio" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
ZFIN:ZDB-GENE-041010-114 GO:GO:0005737 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 CTD:275 HOVERGEN:HBG005822
EMBL:BC083400 EMBL:DQ104411 IPI:IPI00483251 RefSeq:NP_001006021.1
UniGene:Dr.78748 SMR:Q5XJA4 STRING:Q5XJA4 GeneID:450000
KEGG:dre:450000 InParanoid:Q5XJA4 NextBio:20832983 Uniprot:Q5XJA4
Length = 409
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 133/235 (56%), Positives = 162/235 (68%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++TPLYD H +HGGKMV FAG+SMPVQY IT SH+HTR S+FDVSHMLQT V GK
Sbjct: 41 RKTPLYDFHRAHGGKMVEFAGWSMPVQYKDSHIT-SHMHTRQHCSIFDVSHMLQTKVYGK 99
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R +++ES+ V D+ EL +GTLSLFTN +GGI DDLIVTKT +D L++VSNA D
Sbjct: 100 DRVKFIESLIVGDIAELKDNQGTLSLFTNSKGGIMDDLIVTKTDQDYLYVVSNAGCADKD 159
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
M A FKS G D+ L+F+ E LIA+QGP + +LQ+ DL L FMTS
Sbjct: 160 SAHMQARLQEFKSAGHDVDLEFM---EESLIALQGPSMARVLQKGVGDDLKKLTFMTSVL 216
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ GI C +TR GYTGEDGVEISVP + + E LL+D +VKLAGLGARDSL
Sbjct: 217 TPVFGIQGCRVTRCGYTGEDGVEISVPSKDVVLLTEKLLADSEVKLAGLGARDSL 271
Score = 264 (98.0 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 51/108 (47%), Positives = 67/108 (62%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR+ FPGA II QIK+ RKR G STG P+R I +++ + +G +TSGCP
Sbjct: 300 GKRRRQARDFPGADIIVPQIKAKTPRKRVGLISTGPPVRQHTPILSSDGRVIGEVTSGCP 359
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYY 119
SP LK+N+AMGY+E A+SK G + +KMPFV + YY
Sbjct: 360 SPCLKQNVAMGYVETAFSKAGTSIQVEVRKKAVPAVVSKMPFVPTKYY 407
Score = 257 (95.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 57/105 (54%), Positives = 70/105 (66%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
FKS G D+ L+F+ E LIA+QGP + +LQ+ DL L FMTS + GI C
Sbjct: 170 FKSAGHDVDLEFM---EESLIALQGPSMARVLQKGVGDDLKKLTFMTSVLTPVFGIQGCR 226
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+TR GYTGEDGVEISVP + + E LL+D +VKLAGLGARDSL
Sbjct: 227 VTRCGYTGEDGVEISVPSKDVVLLTEKLLADSEVKLAGLGARDSL 271
>FB|FBgn0032287 [details] [associations]
symbol:CG6415 species:7227 "Drosophila melanogaster"
[GO:0004047 "aminomethyltransferase activity" evidence=ISS]
[GO:0005960 "glycine cleavage complex" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] [GO:0005811 "lipid
particle" evidence=IDA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0008483 GO:GO:0005811
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
PANTHER:PTHR13847:SF5 eggNOG:COG0404 TIGRFAMs:TIGR00528
EMBL:BT021235 ProteinModelPortal:Q5BII9 STRING:Q5BII9 PaxDb:Q5BII9
PRIDE:Q5BII9 UCSC:CG6415-RA FlyBase:FBgn0032287 InParanoid:Q5BII9
OrthoDB:EOG4H44K8 ArrayExpress:Q5BII9 Bgee:Q5BII9 Uniprot:Q5BII9
Length = 409
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 128/244 (52%), Positives = 163/244 (66%)
Query: 191 SSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
SS + E QRT LYD H+ GGK+V F G+++PVQY SI ASHLHTR S+FDVSHML
Sbjct: 23 SSAAGEGQRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVSHML 82
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
Q+ + GK LES+C AD+ G G+L++FTNE GGI DDLIV K E L++VSN
Sbjct: 83 QSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSN 142
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTD--LDLS 367
A+ ++ DM +M A D FKS GKD+ ++FL+ ++ L+AVQGP + L + L
Sbjct: 143 AAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLD 202
Query: 368 SLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
LYFM+S T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGA
Sbjct: 203 QLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGA 262
Query: 427 RDSL 430
RDSL
Sbjct: 263 RDSL 266
Score = 267 (99.0 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 59/116 (50%), Positives = 76/116 (65%)
Query: 443 GSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTD--LDLSSLYFMTSR 500
G +K + D FKS GKD+ ++FL+P ++ L+AVQGP + L + L LYFM+S
Sbjct: 151 GIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLDQLYFMSSF 210
Query: 501 PCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
T+AGIP +TR GYTGEDGVEISV Q + E+LL +KLAGLGARDSL
Sbjct: 211 VTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGARDSL 266
Score = 250 (93.1 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 54/114 (47%), Positives = 65/114 (57%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGV---PIRPGYEIFNANDQRVGAITSG 69
KRRR T FPGA +I Q+K GVSR+R G G P R G IF+ Q+VG +TSG
Sbjct: 296 KRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVAIFSQG-QQVGQVTSG 354
Query: 70 CPSPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYTPPK 123
CPSPS +NIAMGY+ G ++ TKMPFVK+NYY PK
Sbjct: 355 CPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVKANYYNRPK 408
>WB|WBGene00017765 [details] [associations]
symbol:gcst-1 species:6239 "Caenorhabditis elegans"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528
GeneTree:ENSGT00510000047333 EMBL:FO080538 PIR:T25732
RefSeq:NP_504502.1 ProteinModelPortal:Q22968 SMR:Q22968
STRING:Q22968 PaxDb:Q22968 EnsemblMetazoa:F25B4.1.1
EnsemblMetazoa:F25B4.1.2 GeneID:178960 KEGG:cel:CELE_F25B4.1
UCSC:F25B4.1.1 CTD:178960 WormBase:F25B4.1 InParanoid:Q22968
NextBio:903294 Uniprot:Q22968
Length = 402
Score = 582 (209.9 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 127/247 (51%), Positives = 165/247 (66%)
Query: 187 FSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVS 246
FS + SA+Q T L + H HGGK+V FAG+ MP QY SI S +HTR VS+FDVS
Sbjct: 17 FSRTAEASAKQ-TCLIETHKKHGGKLVEFAGYDMPTQYADFSIKESTIHTRKHVSLFDVS 75
Query: 247 HMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL 306
HMLQT +TGK R ++ES+ ADV L GTLS+FTNE+GGI+DDLI+ KT +D LFL
Sbjct: 76 HMLQTYITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFL 135
Query: 307 VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
V+NA + D+ + ++S GKD+ ++ L + RGL+AVQGP + +LQ TD+DL
Sbjct: 136 VTNAGCIEKDLPYLQENAAAWRSKGKDVKIETL--DNRGLVAVQGPEMAKVLQEGTDIDL 193
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAG 423
S L FM + + GI C +TR GYTGEDGVEISV + +VE LL+ + VKLAG
Sbjct: 194 SKLTFMKTTVGKVFGIDGCRVTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGSVKLAG 253
Query: 424 LGARDSL 430
LGARD+L
Sbjct: 254 LGARDAL 260
Score = 245 (91.3 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 55/107 (51%), Positives = 73/107 (68%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CT 510
++S GKD+ ++ L + RGL+AVQGP + +LQ TD+DLS L FM + + GI C
Sbjct: 156 WRSKGKDVKIETL--DNRGLVAVQGPEMAKVLQEGTDIDLSKLTFMKTTVGKVFGIDGCR 213
Query: 511 LTRAGYTGEDGVEISVPGEQCTHIVEALLSDE--DVKLAGLGARDSL 555
+TR GYTGEDGVEISV + +VE LL+ + VKLAGLGARD+L
Sbjct: 214 VTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGSVKLAGLGARDAL 260
Score = 188 (71.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 45/121 (37%), Positives = 65/121 (53%)
Query: 3 IYSRLLIFPGKRRRETGGFPGASIIQSQIKS-GVSRKRTGFTS-TGVPIRPGYEIFNAND 60
I + L KRRRET FPGA I Q+K ++R G + G R + + D
Sbjct: 280 IEAGLAFVVAKRRRETLDFPGAEHIVKQLKEKSWPKRRVGLLAPAGRCPRSHLPLIDPLD 339
Query: 61 Q-RVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYY 119
+ +G +TSGCPSP+L KNIA+ Y++ ++SK+G + KMPFV +NY+
Sbjct: 340 KCSIGFVTSGCPSPTLGKNIAIAYVDKSHSKIGTKFVVDFGAKQAPVEVVKMPFVPTNYF 399
Query: 120 T 120
T
Sbjct: 400 T 400
Score = 38 (18.4 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 466 PEER-GLIAVQGPLSSTILQRHTDLDLSSLYFMTS 499
P+ R GL+A G + L LD S+ F+TS
Sbjct: 314 PKRRVGLLAPAGRCPRSHLPLIDPLDKCSIGFVTS 348
>UNIPROTKB|I3LIR4 [details] [associations]
symbol:AMT "Aminomethyltransferase" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0008483
"transaminase activity" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 OMA:KALYGGM
TIGRFAMs:TIGR00528 GeneTree:ENSGT00510000047333
RefSeq:NP_001231355.1 UniGene:Ssc.12062 Ensembl:ENSSSCT00000031431
GeneID:396679 KEGG:ssc:396679 Uniprot:I3LIR4
Length = 403
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 129/238 (54%), Positives = 161/238 (67%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRQHCSLFDVSHMLQTKIFGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA R+ D
Sbjct: 93 DRVKMMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCREKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QDR + L G DI L+ + + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LTLM---QDRVRELQNTGGDIGLEVM---DNALLALQGPTAAQVLQAGVTDDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP + + ALL + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVRLATALLENPEVKLAGLAARDSL 264
Score = 250 (93.1 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 50/109 (45%), Positives = 64/109 (58%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I Q+KS V R+R G T G P+R I + +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGASVIVPQLKSKVQRRRVGLTCEGAPVRAHSPILSTEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYT 120
SP LKKN+AMGY+ +S+ G L +KMPFV ++YYT
Sbjct: 353 SPCLKKNVAMGYVPYEHSRPGTLLLVEVRRKQQVAVVSKMPFVPTSYYT 401
Score = 229 (85.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 54/115 (46%), Positives = 70/115 (60%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L DR + L G DI L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LTLMQDRVRELQNTGGDIGLEVM---DNALLALQGPTAAQVLQAGVTDDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + + ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVRLATALLENPEVKLAGLAARDSL 264
>UNIPROTKB|P25285 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion"
evidence=IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=TAS] [GO:0031405 "lipoic acid binding" evidence=IDA]
[GO:0006546 "glycine catabolic process" evidence=TAS] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0008483
"transaminase activity" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0008483
GO:GO:0005743 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 GO:GO:0031405
eggNOG:COG0404 HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528
EMBL:M59799 IPI:IPI00700367 PIR:A23707 RefSeq:NP_803451.1
UniGene:Bt.7177 ProteinModelPortal:P25285 SMR:P25285 STRING:P25285
PRIDE:P25285 Ensembl:ENSBTAT00000002992 GeneID:280719
KEGG:bta:280719 CTD:275 GeneTree:ENSGT00510000047333
HOVERGEN:HBG005822 InParanoid:P25285 OrthoDB:EOG45MN5K
NextBio:20804898 Uniprot:P25285
Length = 397
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 127/237 (53%), Positives = 160/237 (67%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 29 RTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVN-SHLHTRQHCSLFDVSHMLQTKIFGCD 87
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT E L++VSNA R+ D+
Sbjct: 88 RVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTSASEGHLYVVSNAGCREKDL 147
Query: 318 DLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS 374
LM QD+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 148 TLM---QDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAGVADDLRKLPFMTS 201
Query: 375 RPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 202 AVMEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLKNPEVKLAGLAARDSL 258
Score = 250 (93.1 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 50/108 (46%), Positives = 62/108 (57%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I Q+KS R+R G G P+R I + +GA+TSGCP
Sbjct: 287 GKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCP 346
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYY 119
SP LKKN+AMGY+ YS+ G L +KMPFV +NYY
Sbjct: 347 SPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVSTNYY 394
Score = 234 (87.4 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 53/115 (46%), Positives = 71/115 (61%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 147 LTLMQDKVRELQNKGSDVALEVM---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 203
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP + H+ ALL + +VKLAGL ARDSL
Sbjct: 204 MEVFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLKNPEVKLAGLAARDSL 258
>UNIPROTKB|P48728 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9606 "Homo sapiens" [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0008483 "transaminase activity" evidence=IEA]
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739
GO:GO:0008483 DrugBank:DB00157 EMBL:CH471055 DrugBank:DB00116
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 MIM:605899
Orphanet:407 eggNOG:COG0404 HOGENOM:HOG000239380 OMA:KALYGGM
TIGRFAMs:TIGR00528 CTD:275 HOVERGEN:HBG005822 EMBL:D13811
EMBL:D14686 EMBL:AK290600 EMBL:AK293481 EMBL:AK296177 EMBL:BC007546
IPI:IPI00299300 IPI:IPI00793058 IPI:IPI00910686 IPI:IPI00925396
PIR:I54192 RefSeq:NP_000472.2 RefSeq:NP_001158182.1
RefSeq:NP_001158183.1 UniGene:Hs.102 PDB:1WSR PDB:1WSV PDBsum:1WSR
PDBsum:1WSV ProteinModelPortal:P48728 SMR:P48728 STRING:P48728
PhosphoSite:P48728 DMDM:1346122 PaxDb:P48728 PRIDE:P48728
Ensembl:ENST00000273588 Ensembl:ENST00000395338
Ensembl:ENST00000458307 Ensembl:ENST00000538581 GeneID:275
KEGG:hsa:275 UCSC:uc003cww.3 GeneCards:GC03M049429 HGNC:HGNC:473
HPA:HPA005566 MIM:238310 neXtProt:NX_P48728 PharmGKB:PA24780
InParanoid:P48728 PhylomeDB:P48728 SABIO-RK:P48728 ChiTaRS:AMT
EvolutionaryTrace:P48728 GenomeRNAi:275 NextBio:1109
ArrayExpress:P48728 Bgee:P48728 CleanEx:HS_AMT
Genevestigator:P48728 GermOnline:ENSG00000145020 Uniprot:P48728
Length = 403
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 129/238 (54%), Positives = 162/238 (68%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 152
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 153 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 206
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 207 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
Score = 259 (96.2 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 51/109 (46%), Positives = 63/109 (57%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L +KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
Score = 229 (85.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 53/115 (46%), Positives = 71/115 (61%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 264
>UNIPROTKB|H0Y695 [details] [associations]
symbol:AMT "Aminomethyltransferase" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0008483 "transaminase
activity" evidence=IEA] [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 HGNC:HGNC:473
ChiTaRS:AMT ProteinModelPortal:H0Y695 Ensembl:ENST00000427987
Uniprot:H0Y695
Length = 384
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 129/238 (54%), Positives = 162/238 (68%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY S T SHLHTR S+FDVSHMLQT + G
Sbjct: 32 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTRQHCSLFDVSHMLQTKILGS 90
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D
Sbjct: 91 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKD 150
Query: 317 MDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMT 373
+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMT
Sbjct: 151 LALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMT 204
Query: 374 SRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
S + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 205 SAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 262
Score = 229 (85.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 53/115 (46%), Positives = 71/115 (61%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 151 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 207
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 208 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 262
Score = 219 (82.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 42/84 (50%), Positives = 52/84 (61%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 291 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 350
Query: 72 SPSLKKNIAMGYIEPAYSKVGVEL 95
SPSLKKN+AMGY+ YS+ G L
Sbjct: 351 SPSLKKNVAMGYVPCEYSRPGTML 374
>MGI|MGI:3646700 [details] [associations]
symbol:Amt "aminomethyltransferase" species:10090 "Mus
musculus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006546 "glycine catabolic
process" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008483 "transaminase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 MGI:MGI:3646700 GO:GO:0005739
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528 CTD:275
GeneTree:ENSGT00510000047333 HOVERGEN:HBG005822 OrthoDB:EOG45MN5K
EMBL:AJ437692 IPI:IPI00229274 RefSeq:NP_001013836.1
UniGene:Mm.390225 ProteinModelPortal:Q8CFA2 SMR:Q8CFA2
STRING:Q8CFA2 PhosphoSite:Q8CFA2 PaxDb:Q8CFA2 PRIDE:Q8CFA2
Ensembl:ENSMUST00000035230 GeneID:434437 KEGG:mmu:434437
InParanoid:Q8CFA2 NextBio:409655 Bgee:Q8CFA2 CleanEx:MM_AMT
Genevestigator:Q8CFA2 GermOnline:ENSMUSG00000032607 Uniprot:Q8CFA2
Length = 403
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 135/285 (47%), Positives = 177/285 (62%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKIFGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + LES+ V D+ EL P +GTLSLFTNE GGI DDLIV+ T E L++VSNA R D
Sbjct: 93 DRVKLLESVVVGDIAELRPNQGTLSLFTNEAGGILDDLIVSNTSEGHLYVVSNAGCRDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM F++ G D+ L+ + E L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---ENALLALQGPTATQVLQAGVTDDMKKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL---SG 432
+ G+ C +TR GYTGEDGVEISVP H+ LL + +VKLAGL ARDSL +G
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPATGAVHLATTLLKNPEVKLAGLAARDSLRLEAG 269
Query: 433 ------DITLNTPVPHGSLKLSNDRFKSLGKDIH-LQFLSPEERG 470
DI +T GSL + + + + D + + P+ +G
Sbjct: 270 LCLYGNDIDEHTTPVEGSLSWTLGKRRRIAMDFPGAKIIVPQLKG 314
Score = 259 (96.2 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 52/109 (47%), Positives = 63/109 (57%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA II Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRIAMDFPGAKIIVPQLKGEVQRRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L +KMPFV +NYYT
Sbjct: 353 SPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYYT 401
Score = 227 (85.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 52/115 (45%), Positives = 70/115 (60%)
Query: 445 LKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ F++ G D+ L+ + E L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---ENALLALQGPTATQVLQAGVTDDMKKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ LL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPATGAVHLATTLLKNPEVKLAGLAARDSL 264
>RGD|1359408 [details] [associations]
symbol:Amt "aminomethyltransferase" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 RGD:1359408 GO:GO:0005737 GO:GO:0008483
EMBL:CH473954 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528
CTD:275 HOVERGEN:HBG005822 EMBL:BC083803 IPI:IPI00358872
RefSeq:NP_001014026.1 UniGene:Rn.162376 SMR:Q5XI85 GeneID:306586
KEGG:rno:306586 NextBio:656268 Genevestigator:Q5XI85 Uniprot:Q5XI85
Length = 403
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 125/235 (53%), Positives = 157/235 (66%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKIFGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R +E+I V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA R D
Sbjct: 93 DRVRLMENIVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCRDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM F++ G D+ L+ + + L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---DNALLALQGPTAAQVLQAGVTDDMRKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLKNPEVKLAGLAARDSL 264
Score = 251 (93.4 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 51/109 (46%), Positives = 62/109 (56%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA II Q+K V R+R G G P+R I N +G +TSGCP
Sbjct: 293 GKRRRVAMDFPGAKIIIPQLKGEVQRRRVGLICEGAPMRAHSPILNTEGAVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G +L +KMPFV + YYT
Sbjct: 353 SPSLKKNVAMGYVAFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTKYYT 401
Score = 227 (85.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 52/115 (45%), Positives = 71/115 (61%)
Query: 445 LKLSNDR---FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ F++ G D+ L+ + + L+A+QGP ++ +LQ D+ L FMTS
Sbjct: 153 LALMQDKVKEFQNRGLDVGLEVV---DNALLALQGPTAAQVLQAGVTDDMRKLPFMTSAV 209
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLKNPEVKLAGLAARDSL 264
>UNIPROTKB|Q9TSZ7 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9615 "Canis lupus familiaris" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0008483 "transaminase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 EMBL:AJ012166
KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
OMA:KALYGGM TIGRFAMs:TIGR00528 CTD:275 GeneTree:ENSGT00510000047333
HOVERGEN:HBG005822 RefSeq:NP_001029165.1 UniGene:Cfa.11059
ProteinModelPortal:Q9TSZ7 SMR:Q9TSZ7 STRING:Q9TSZ7 PRIDE:Q9TSZ7
Ensembl:ENSCAFT00000035669 GeneID:484770 KEGG:cfa:484770
InParanoid:Q9TSZ7 SABIO-RK:Q9TSZ7 NextBio:20858847 Uniprot:Q9TSZ7
Length = 403
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 123/235 (52%), Positives = 157/235 (66%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYD HL+HGGKMV FAG+S+PVQY + SHLHTR S+FDVSHMLQT + G
Sbjct: 34 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVD-SHLHTRRHCSLFDVSHMLQTKILGC 92
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
R + +ES+ V D+ EL P +GTLSLFTNE GGI+DDLIVT T E L++VSNA D
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGIEDDLIVTSTSEGYLYVVSNAGCWDKD 152
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ LM +++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 153 LALMQGKVRELQNMGSDVSLEVV---DNALLALQGPTATQVLQAGVADDLRKLPFMTSAV 209
Query: 377 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPAAAAVRLAAALLENPEVKLAGLAARDSL 264
Score = 265 (98.3 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 52/109 (47%), Positives = 64/109 (58%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGAS+I +Q+K V R+R G T G P+R I N +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGASVIIAQLKGKVQRRRVGLTCEGAPVRAHSPILNMEGTVIGTVTSGCP 352
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYT 120
SP LKKN+AMGY+ YS+ G L +KMPFV +NYYT
Sbjct: 353 SPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYYT 401
Score = 221 (82.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 48/104 (46%), Positives = 66/104 (63%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTL 511
+++G D+ L+ + + L+A+QGP ++ +LQ DL L FMTS + G+ C +
Sbjct: 164 QNMGSDVSLEVV---DNALLALQGPTATQVLQAGVADDLRKLPFMTSAVMEVFGVSGCRV 220
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TR GYTGEDGVEISVP + ALL + +VKLAGL ARDSL
Sbjct: 221 TRCGYTGEDGVEISVPAAAAVRLAAALLENPEVKLAGLAARDSL 264
>UNIPROTKB|P28337 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9031 "Gallus gallus" [GO:0006546 "glycine catabolic
process" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 CTD:275 HOVERGEN:HBG005822
EMBL:D11162 IPI:IPI00578487 PIR:A44167 RefSeq:NP_990119.1
UniGene:Gga.1002 ProteinModelPortal:P28337 SMR:P28337 PRIDE:P28337
GeneID:395566 KEGG:gga:395566 BioCyc:MetaCyc:MONOMER-12927
NextBio:20815640 Uniprot:P28337
Length = 392
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 123/241 (51%), Positives = 155/241 (64%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
S+P ++TPL LH + GG+MVPFAG+S+PVQYG + SHLHTR S+FDVSHMLQ
Sbjct: 17 SAPEGLKQTPLDALHRARGGRMVPFAGWSLPVQYGRGHLE-SHLHTRRHCSLFDVSHMLQ 75
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
T V G+ R +LES+ V D+ EL PG+GTL+L TNE+G I DDLIVT T ED L++VSNA
Sbjct: 76 TRVYGRDRVRFLESLVVGDIAELRPGQGTLTLLTNERGDIVDDLIVTNTAEDHLYVVSNA 135
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
D +M ++ G D+HL+ G VQGP + +LQ DL+ L
Sbjct: 136 GCADKDRAVMEGRAAELRAAGGDVHLEVSGQRAAG---VQGPSMAQVLQAGLPDDLTKLT 192
Query: 371 FMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDS 429
FMTS T+ G+P C +TR GYTGEDGVEISVP + + E LL +V AGL ARDS
Sbjct: 193 FMTSTATTVFGVPGCRVTRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDS 252
Query: 430 L 430
L
Sbjct: 253 L 253
Score = 265 (98.3 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 54/108 (50%), Positives = 64/108 (59%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA+II Q+K RKR G TS G P+RP I VG +TSGCP
Sbjct: 282 GKRRRTAMDFPGAAIIMEQVKEKPKRKRVGLTSVGPPLRPPAAILGPEGTPVGTVTSGCP 341
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYY 119
SPSL KNIAMGY++ A+S+ G L TKMPFV ++YY
Sbjct: 342 SPSLGKNIAMGYVQAAHSRPGTTLTVEVRKKQHPALVTKMPFVPTHYY 389
Score = 215 (80.7 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 49/104 (47%), Positives = 62/104 (59%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIP-CTL 511
++ G D+HL+ G VQGP + +LQ DL+ L FMTS T+ G+P C +
Sbjct: 153 RAAGGDVHLEVSGQRAAG---VQGPSMAQVLQAGLPDDLTKLTFMTSTATTVFGVPGCRV 209
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
TR GYTGEDGVEISVP + + E LL +V AGL ARDSL
Sbjct: 210 TRCGYTGEDGVEISVPAGRAVELAERLLGCPEVWPAGLAARDSL 253
>UNIPROTKB|P49364 [details] [associations]
symbol:GDCST "Aminomethyltransferase, mitochondrial"
species:3888 "Pisum sativum" [GO:0005960 "glycine cleavage complex"
evidence=IDA] InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005960
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 EMBL:X74793 EMBL:Z25861
EMBL:AJ222771 PIR:S38370 PIR:S56661 ProteinModelPortal:P49364
SMR:P49364 IntAct:P49364 PRIDE:P49364 Uniprot:P49364
Length = 408
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 117/242 (48%), Positives = 153/242 (63%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
++ S ++T LYD H++HGGKMVPFAG+SMP+QY SI S L+ R S+FDVSHM
Sbjct: 31 ATESELKKTVLYDFHVAHGGKMVPFAGWSMPIQYKD-SIMDSTLNCRQNGSLFDVSHMCG 89
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK +LE + +ADV L G GTL++FTNE+GG DD ++TK +D L+LV NA
Sbjct: 90 LSLKGKDVVSFLEKLVIADVAALAHGTGTLTVFTNEKGGAIDDSVITKVTDDHLYLVVNA 149
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R D+ + FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LY
Sbjct: 150 GCRDKDLAHIEEHMKAFKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLY 207
Query: 371 FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARD 428
F R I G C LTR GYTGEDG EISVP E + +ALL S+ ++L GLGARD
Sbjct: 208 FGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIRLTGLGARD 267
Query: 429 SL 430
SL
Sbjct: 268 SL 269
Score = 236 (88.1 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 54/106 (50%), Positives = 67/106 (63%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FK+ G D+ +ER L+A+QGPL++ +LQ T DLS LYF R I G C L
Sbjct: 166 FKAKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGEFRVLDINGSQCFL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +ALL S+ ++L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPSEHGVELAKALLEKSEGKIRLTGLGARDSL 269
Score = 223 (83.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 48/110 (43%), Positives = 61/110 (55%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+ G S +R GF S+G P R EI + +G +TSG
Sbjct: 298 GKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPPRSHSEIQDEGGNNIGEVTSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYTP 121
SP LKKNIA+GY++ K G ++ TKMPFV + YY P
Sbjct: 358 SPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKQNEGVVTKMPFVPTKYYKP 407
>TAIR|locus:2008900 [details] [associations]
symbol:AT1G11860 species:3702 "Arabidopsis thaliana"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006546 "glycine catabolic process"
evidence=IEA;RCA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0007389 "pattern specification process" evidence=RCA]
[GO:0008361 "regulation of cell size" evidence=RCA] [GO:0009658
"chloroplast organization" evidence=RCA] [GO:0009926 "auxin polar
transport" evidence=RCA] [GO:0010015 "root morphogenesis"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0048481
"ovule development" evidence=RCA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0046686 GO:GO:0009570
GO:GO:0008483 GO:GO:0016020 GO:GO:0048046 GO:GO:0009941
EMBL:AC002131 GO:GO:0009534 GO:GO:0022626 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 EMBL:AY125509 EMBL:BT006361 EMBL:Z26545
IPI:IPI00538278 PIR:H86252 RefSeq:NP_001184969.1 RefSeq:NP_172650.1
RefSeq:NP_849646.1 UniGene:At.47506 ProteinModelPortal:O65396
SMR:O65396 STRING:O65396 SWISS-2DPAGE:O65396 PaxDb:O65396
PRIDE:O65396 ProMEX:O65396 EnsemblPlants:AT1G11860.1
EnsemblPlants:AT1G11860.2 EnsemblPlants:AT1G11860.3 GeneID:837733
KEGG:ath:AT1G11860 GeneFarm:1742 TAIR:At1g11860 eggNOG:COG0404
HOGENOM:HOG000239380 InParanoid:O65396 OMA:KALYGGM PhylomeDB:O65396
ProtClustDB:PLN02319 Genevestigator:O65396 GermOnline:AT1G11860
TIGRFAMs:TIGR00528 Uniprot:O65396
Length = 408
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 113/236 (47%), Positives = 152/236 (64%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
++T LYD H++HGGKMVPFAG+SMP+QY SI S ++ R S+FDV+HM + GK
Sbjct: 37 KKTALYDFHVAHGGKMVPFAGWSMPIQYKD-SIMDSTVNCRENGSLFDVAHMCGLSLKGK 95
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+LE++ VADV L PG G+L++FTNE+GG DD ++TK ++ ++LV NA R D
Sbjct: 96 DCVPFLETLVVADVAGLAPGTGSLTVFTNEKGGAIDDSVITKVTDEHIYLVVNAGCRDKD 155
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + FKS G D+ +ER L+A+QGPL++ +LQ T DLS LYF +
Sbjct: 156 LAHIEEHMKAFKSKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGNFQI 213
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 430
I G C LTR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 214 LDINGSTCFLTRTGYTGEDGFEISVPDEHAVDLAKAILEKSEGKVRLTGLGARDSL 269
Score = 238 (88.8 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 49/110 (44%), Positives = 65/110 (59%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR GGF GA +I Q+K G + +R GF S+G P R E+ + + ++G ITSG
Sbjct: 298 GKRRRAEGGFLGADVILQQLKDGPTIRRVGFFSSGPPARSHSEVHDESGNKIGEITSGGF 357
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYTP 121
SP+LKKNIAMGY++ K G ++ TKMPFV + YY P
Sbjct: 358 SPNLKKNIAMGYVKSGQHKTGTKVKILVRGKPYEGSITKMPFVATKYYKP 407
Score = 235 (87.8 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 54/106 (50%), Positives = 67/106 (63%)
Query: 452 FKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTL 511
FKS G D+ +ER L+A+QGPL++ +LQ T DLS LYF + I G C L
Sbjct: 166 FKSKGGDVSWHI--HDERSLLALQGPLAAPVLQHLTKEDLSKLYFGNFQILDINGSTCFL 223
Query: 512 TRAGYTGEDGVEISVPGEQCTHIVEALL--SDEDVKLAGLGARDSL 555
TR GYTGEDG EISVP E + +A+L S+ V+L GLGARDSL
Sbjct: 224 TRTGYTGEDGFEISVPDEHAVDLAKAILEKSEGKVRLTGLGARDSL 269
>DICTYBASE|DDB_G0292326 [details] [associations]
symbol:gcvT "aminomethyltransferase" species:44689
"Dictyostelium discoideum" [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008483 "transaminase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
dictyBase:DDB_G0292326 GO:GO:0005739 GO:GO:0008483
GenomeReviews:CM000155_GR EMBL:AAFI02000189 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528
RefSeq:XP_629708.1 HSSP:P48728 ProteinModelPortal:Q54DD3
STRING:Q54DD3 PRIDE:Q54DD3 EnsemblProtists:DDB0231218
GeneID:8628622 KEGG:ddi:DDB_G0292326 ProtClustDB:CLSZ2429438
Uniprot:Q54DD3
Length = 403
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 116/249 (46%), Positives = 154/249 (61%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS + ++T L +LH G KMVPF G+ MPVQY A + HLH R + +FDVSHM Q
Sbjct: 19 SSSNELKKTALNELHKELGAKMVPFCGWEMPVQYPA-GVMKEHLHVRKESGLFDVSHMGQ 77
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
+ GK R ++ ESI VAD+ L G LS+FTNE+GGI DD ++T DSL++V NA
Sbjct: 78 LRIHGKDRVKFFESIVVADLQALPTGHSKLSVFTNEKGGIIDDTMITNA-GDSLYVVVNA 136
Query: 311 SRRKVDMDLMVAAQDRFKSLGK--DIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDLS 367
D+ + FKS+ D+ +Q L E+ LIA+QGP + +ILQ+ D D++
Sbjct: 137 GCADKDISHINEKIKEFKSVNPTHDVSMQLL--EDLSLIAIQGPTTESILQKFVKDQDIT 194
Query: 368 SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS------DEDVKL 421
++ FMT RP TIAGI C +TR GYTGEDG EISVP +Q + E L+ + +K
Sbjct: 195 NMEFMTQRPMTIAGIDCIVTRCGYTGEDGFEISVPSKQAVRLAELFLATSNASIESGIKP 254
Query: 422 AGLGARDSL 430
AGLGARDSL
Sbjct: 255 AGLGARDSL 263
Score = 250 (93.1 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 63/151 (41%), Positives = 88/151 (58%)
Query: 417 EDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDR---FKSLGK--DIHLQFLSPEERGL 471
+D + G DSL + +N + N++ FKS+ D+ +Q L E+ L
Sbjct: 119 DDTMITNAG--DSLY--VVVNAGCADKDISHINEKIKEFKSVNPTHDVSMQLL--EDLSL 172
Query: 472 IAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
IA+QGP + +ILQ+ D D++++ FMT RP TIAGI C +TR GYTGEDG EISVP +Q
Sbjct: 173 IAIQGPTTESILQKFVKDQDITNMEFMTQRPMTIAGIDCIVTRCGYTGEDGFEISVPSKQ 232
Query: 531 CTHIVEALLS------DEDVKLAGLGARDSL 555
+ E L+ + +K AGLGARDSL
Sbjct: 233 AVRLAELFLATSNASIESGIKPAGLGARDSL 263
Score = 221 (82.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 46/108 (42%), Positives = 65/108 (60%)
Query: 13 KRRRETGGFPGASIIQSQI-KSGVSRKRTGFTSTGVPIRPGYEIFN-ANDQRVGAITSGC 70
KRRRE GGFPGASIIQ Q+ K G +KR G G P R G I + + +Q +G +TSG
Sbjct: 293 KRRREEGGFPGASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSGT 352
Query: 71 PSPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNY 118
SP +++I+M Y++ +SK+G ++ +KMPFV +NY
Sbjct: 353 ISPITRQSISMAYVKTPFSKIGTQVNVSIRGKPITATISKMPFVPTNY 400
>TIGR_CMR|CPS_3841 [details] [associations]
symbol:CPS_3841 "glycine cleavage system T protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
RefSeq:YP_270503.1 ProteinModelPortal:Q47XG7 STRING:Q47XG7
GeneID:3518894 KEGG:cps:CPS_3841 PATRIC:21470589 OMA:QRYAMFT
ProtClustDB:CLSK910129 BioCyc:CPSY167879:GI48-3858-MONOMER
Uniprot:Q47XG7
Length = 375
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 105/233 (45%), Positives = 147/233 (63%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+TP YDLH+ GGKMVPFAG+ MPVQY + + HLHTR++ +FDVSHM Q + GK+
Sbjct: 10 KTPCYDLHIEAGGKMVPFAGYDMPVQY-EMGVKKEHLHTRAQAGLFDVSHMGQLKLVGKN 68
Query: 258 REEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDM 317
LE++ D+ +L GK +LFTN+QGG+ DDL+V+ D LF+V NA+ + D+
Sbjct: 69 AAAALETLVPVDIIDLPQGKQRYALFTNDQGGLLDDLMVSN-FGDHLFVVVNAACKAQDI 127
Query: 318 DLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPC 377
M K L D+ ++ L E R L+A+QGP + +L+R + + + FM SR
Sbjct: 128 AHMQ------KHLPADVEIEIL--EGRALLALQGPKAGEVLKRLLP-ESADMVFMDSRVV 178
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
AG C + RAGYTGEDG EIS+PGE I +L++E+++ GLGARDSL
Sbjct: 179 DFAGAQCIIGRAGYTGEDGFEISIPGEHAERITRLMLAEEEIEWIGLGARDSL 231
Score = 219 (82.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 46/103 (44%), Positives = 65/103 (63%)
Query: 453 KSLGKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLT 512
K L D+ ++ L E R L+A+QGP + +L+R + + + FM SR AG C +
Sbjct: 132 KHLPADVEIEIL--EGRALLALQGPKAGEVLKRLLP-ESADMVFMDSRVVDFAGAQCIIG 188
Query: 513 RAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
RAGYTGEDG EIS+PGE I +L++E+++ GLGARDSL
Sbjct: 189 RAGYTGEDGFEISIPGEHAERITRLMLAEEEIEWIGLGARDSL 231
Score = 193 (73.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 40/103 (38%), Positives = 56/103 (54%)
Query: 19 GGFPGASIIQSQIKS-GVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCPSPSLK 76
GGFPGA II QI + V+RKR G G P+R G ++FNA +G +TSG P+
Sbjct: 271 GGFPGADIILDQIATKDVARKRIGMVGLGKAPVREGIKLFNAQGDEIGVVTSGTAGPTKG 330
Query: 77 KNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYY 119
IAMGY++ Y+ + E++ KMPFV+ Y+
Sbjct: 331 SPIAMGYVQTQYAVLDTEIFAEVRGKKLPMLIQKMPFVEQRYF 373
>POMBASE|SPAC31G5.14 [details] [associations]
symbol:gcv1 "glycine decarboxylase T subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS;IDA] [GO:0005960 "glycine cleavage
complex" evidence=ISS] [GO:0008483 "transaminase activity"
evidence=ISS] [GO:0019464 "glycine decarboxylation via glycine
cleavage system" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
PomBase:SPAC31G5.14 GO:GO:0005739 GO:GO:0008483 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0004047 InterPro:IPR013977
Pfam:PF08669 GO:GO:0019464 GO:GO:0005960 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
OMA:KALYGGM TIGRFAMs:TIGR00528 EMBL:D84656 PIR:T38631
RefSeq:NP_594015.1 ProteinModelPortal:O14110 STRING:O14110
PRIDE:O14110 EnsemblFungi:SPAC31G5.14.1 GeneID:2543195
KEGG:spo:SPAC31G5.14 OrthoDB:EOG4WT0K6 NextBio:20804218
Uniprot:O14110
Length = 387
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/244 (43%), Positives = 151/244 (61%)
Query: 188 SPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSH 247
S ++ S+ +RTPLYDLHL G +VPFAGFSMPVQY +I+ASH TR +FDVSH
Sbjct: 14 SSTAASSSLKRTPLYDLHLKEGATIVPFAGFSMPVQYKGQTISASHKWTREHSGLFDVSH 73
Query: 248 MLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLV 307
M+Q V G++ +LESI + + EL P TLS FTNE GGI DD I++K E++ ++V
Sbjct: 74 MVQWFVRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDENTYYIV 133
Query: 308 SNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT-DLDL 366
+NA+ + D + + +K + L+ + R LIA+QGP +++++Q+ ++D
Sbjct: 134 TNAACSEKDEANLKKHIENWKG----VELE--RVQGRALIAIQGPETASVVQKLIPNVDF 187
Query: 367 SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
S L F S G+ C +R+GYTGEDG E+S+P E LL+D V+ GLGA
Sbjct: 188 SVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIPEEVSVDFASTLLADTRVRPIGLGA 247
Query: 427 RDSL 430
RD+L
Sbjct: 248 RDTL 251
Score = 226 (84.6 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 48/108 (44%), Positives = 62/108 (57%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR+ GGF G+S I ++K G SR+R GF VP R G + + VG +TSGCP
Sbjct: 280 GKRRRKEGGFVGSSRILKELKDGPSRRRVGFIVEKVPARHGSAV-EVDGVEVGQVTSGCP 338
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYY 119
SP+L KNIAMGYI +VG +MPFV+++YY
Sbjct: 339 SPTLGKNIAMGYISTGLHQVGTPAHIKVRNKLHPAQVVRMPFVETHYY 386
Score = 181 (68.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 469 RGLIAVQGPLSSTILQRHT-DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
R LIA+QGP +++++Q+ ++D S L F S G+ C +R+GYTGEDG E+S+P
Sbjct: 164 RALIAIQGPETASVVQKLIPNVDFSVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIP 223
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
E LL+D V+ GLGARD+L
Sbjct: 224 EEVSVDFASTLLADTRVRPIGLGARDTL 251
>ASPGD|ASPL0000056788 [details] [associations]
symbol:AN1198 species:162425 "Emericella nidulans"
[GO:0004047 "aminomethyltransferase activity" evidence=RCA]
[GO:0006520 "cellular amino acid metabolic process" evidence=RCA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004375 "glycine
dehydrogenase (decarboxylating) activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:BN001308 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528
EnsemblFungi:CADANIAT00001427 OMA:GNDITPD Uniprot:C8VSU4
Length = 480
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 111/267 (41%), Positives = 155/267 (58%)
Query: 181 SGLTFVFSPGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKV 240
+G+ + S +SP + ++T LYDLH++ G KMVPFAG+SMP+QY +S SH TR K
Sbjct: 62 NGVRYA-SSAASPGSLRKTQLYDLHIAKGAKMVPFAGYSMPLQYSDLSHVESHKWTREKA 120
Query: 241 SVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLS-LFTNEQGGIQDDLIVTKT 299
S+FDVSHM+Q ++G + L + + + +L+ TLS L GGI DD ++T+
Sbjct: 121 SLFDVSHMVQHRLSGPGALDLLMKVTPSSLDKLENNSSTLSCLLEPGTGGIVDDTVITRL 180
Query: 300 LEDSLFLVSNASRRKVDMDLMVAAQDRFKSL-G--KDIHLQFLSAEERGLIAVQGPLSST 356
D+ + V+NA RR D+ + A D FK+ G K+I + LS + LIA+QGP ++
Sbjct: 181 STDTFYFVTNAGRRDEDLAFLTAEIDAFKAAHGAEKEITWEILS--DHSLIALQGPEAAA 238
Query: 357 ILQR--HT---DLDLSSLYFMTSRPC-------TIAGIPCTLTRAGYTGEDGVEISVPGE 404
LQ H D DLS+LYF R T P ++R GYTGEDG EIS+P
Sbjct: 239 TLQPLIHNNGADSDLSTLYFGNCRSLHLNLPDGTQTQEPLLISRTGYTGEDGFEISIPPS 298
Query: 405 QC-THIVEALLSDEDVKLAGLGARDSL 430
+ I E LL + V+LAGL ARDSL
Sbjct: 299 VSPSTITELLLQNPSVRLAGLAARDSL 325
Score = 167 (63.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 44/110 (40%), Positives = 58/110 (52%)
Query: 21 FPGASIIQSQIKS---GVSRKRTGFT-STGVPIRPGYEIFNANDQ---RVGAITSGCPSP 73
F GA+ I Q+ S +S++R GFT G P R G I + ND+ ++G ITSG PSP
Sbjct: 369 FNGAATILPQLASPSKNLSQRRVGFTIEKGSPAREGAVIIDLNDESKTQIGVITSGLPSP 428
Query: 74 SLK-KNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYTPP 122
SL NIAMGYI+ K G E+ MP+V+S +Y P
Sbjct: 429 SLGGTNIAMGYIKQGLHKKGTEVGVVVRNKVRKATVVGMPWVESKFYRKP 478
Score = 165 (63.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 53/122 (43%), Positives = 67/122 (54%)
Query: 450 DRFKSL-G--KDIHLQFLSPEERGLIAVQGPLSSTILQR--HT---DLDLSSLYFMTSRP 501
D FK+ G K+I + LS + LIA+QGP ++ LQ H D DLS+LYF R
Sbjct: 206 DAFKAAHGAEKEITWEILS--DHSLIALQGPEAAATLQPLIHNNGADSDLSTLYFGNCRS 263
Query: 502 C-------TIAGIPCTLTRAGYTGEDGVEISVPGEQC-THIVEALLSDEDVKLAGLGARD 553
T P ++R GYTGEDG EIS+P + I E LL + V+LAGL ARD
Sbjct: 264 LHLNLPDGTQTQEPLLISRTGYTGEDGFEISIPPSVSPSTITELLLQNPSVRLAGLAARD 323
Query: 554 SL 555
SL
Sbjct: 324 SL 325
>CGD|CAL0006098 [details] [associations]
symbol:GCV1 species:5476 "Candida albicans" [GO:0004375
"glycine dehydrogenase (decarboxylating) activity"
evidence=IEA;NAS] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA]
[GO:0006544 "glycine metabolic process" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:AACQ01000034
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0004375 PANTHER:PTHR13847:SF5 eggNOG:COG0404
TIGRFAMs:TIGR00528 RefSeq:XP_719084.1 STRING:Q5AC31 GeneID:3639172
KEGG:cal:CaO19.5519 Uniprot:Q5AC31
Length = 394
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 102/250 (40%), Positives = 144/250 (57%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS S +TPL++ H+ GGKMVP+AGF MPV Y S SH RSKV +FDVSHMLQ
Sbjct: 11 SSTSNLLKTPLHEAHIELGGKMVPYAGFEMPVLYKGQSHIESHNWVRSKVGLFDVSHMLQ 70
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
++GK + L+ I D+ +L +LS+ N GG+ DD I+TK ED ++V+NA
Sbjct: 71 HNISGKDAQSLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDEYYMVTNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R+ D+ + +F S+ H F E L+A+QGP + ILQ+ T+ DLS +Y
Sbjct: 131 GCREKDVKFIKDEASQFNSVN---HNTF----EGTLLAIQGPKAQEILQQFTNEDLSKIY 183
Query: 371 FMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVPG------EQCTHIVEALLSD--EDVK 420
F ++ ++ I T L R+GYTGEDG E+S+P +Q L+++ + VK
Sbjct: 184 FGQTKFLKLSPIGATVYLARSGYTGEDGFELSIPSTTPEESKQALDFFYTLINEYPDVVK 243
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 244 PIGLAARDSL 253
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/116 (40%), Positives = 57/116 (49%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK--SGVSRKRTGFTSTGVPIRPGYEIFNANDQRV-GA 65
+ P RR E F GAS I SQIK S + +R G TS G R G +IFN + V G
Sbjct: 280 LIPKTRRDENNDFNGASKILSQIKDKSSFTHRRIGLTSKGPSPRDGNKIFNEDGTVVIGY 339
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYTP 121
+TSG PSP+L NIA YI + G + TK+PFV S Y P
Sbjct: 340 VTSGSPSPTLGGNIAQAYIAKXHXX-GSNVKIEIRNKLRDAVITKLPFVPSILYNP 394
Score = 153 (58.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 40/98 (40%), Positives = 58/98 (59%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEIS 525
E L+A+QGP + ILQ+ T+ DLS +YF ++ ++ I T L R+GYTGEDG E+S
Sbjct: 156 EGTLLAIQGPKAQEILQQFTNEDLSKIYFGQTKFLKLSPIGATVYLARSGYTGEDGFELS 215
Query: 526 VPG------EQCTHIVEALLSD--EDVKLAGLGARDSL 555
+P +Q L+++ + VK GL ARDSL
Sbjct: 216 IPSTTPEESKQALDFFYTLINEYPDVVKPIGLAARDSL 253
>UNIPROTKB|Q5AC31 [details] [associations]
symbol:GCV1 "Aminomethyltransferase" species:237561
"Candida albicans SC5314" [GO:0004375 "glycine dehydrogenase
(decarboxylating) activity" evidence=NAS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:AACQ01000034 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GO:GO:0004375 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 RefSeq:XP_719084.1 STRING:Q5AC31
GeneID:3639172 KEGG:cal:CaO19.5519 Uniprot:Q5AC31
Length = 394
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 102/250 (40%), Positives = 144/250 (57%)
Query: 191 SSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQ 250
SS S +TPL++ H+ GGKMVP+AGF MPV Y S SH RSKV +FDVSHMLQ
Sbjct: 11 SSTSNLLKTPLHEAHIELGGKMVPYAGFEMPVLYKGQSHIESHNWVRSKVGLFDVSHMLQ 70
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNA 310
++GK + L+ I D+ +L +LS+ N GG+ DD I+TK ED ++V+NA
Sbjct: 71 HNISGKDAQSLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDEYYMVTNA 130
Query: 311 SRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLY 370
R+ D+ + +F S+ H F E L+A+QGP + ILQ+ T+ DLS +Y
Sbjct: 131 GCREKDVKFIKDEASQFNSVN---HNTF----EGTLLAIQGPKAQEILQQFTNEDLSKIY 183
Query: 371 FMTSRPCTIAGIPCT--LTRAGYTGEDGVEISVPG------EQCTHIVEALLSD--EDVK 420
F ++ ++ I T L R+GYTGEDG E+S+P +Q L+++ + VK
Sbjct: 184 FGQTKFLKLSPIGATVYLARSGYTGEDGFELSIPSTTPEESKQALDFFYTLINEYPDVVK 243
Query: 421 LAGLGARDSL 430
GL ARDSL
Sbjct: 244 PIGLAARDSL 253
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/116 (40%), Positives = 57/116 (49%)
Query: 9 IFPGKRRRETGGFPGASIIQSQIK--SGVSRKRTGFTSTGVPIRPGYEIFNANDQRV-GA 65
+ P RR E F GAS I SQIK S + +R G TS G R G +IFN + V G
Sbjct: 280 LIPKTRRDENNDFNGASKILSQIKDKSSFTHRRIGLTSKGPSPRDGNKIFNEDGTVVIGY 339
Query: 66 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYTP 121
+TSG PSP+L NIA YI + G + TK+PFV S Y P
Sbjct: 340 VTSGSPSPTLGGNIAQAYIAKXHXX-GSNVKIEIRNKLRDAVITKLPFVPSILYNP 394
Score = 153 (58.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 40/98 (40%), Positives = 58/98 (59%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCT--LTRAGYTGEDGVEIS 525
E L+A+QGP + ILQ+ T+ DLS +YF ++ ++ I T L R+GYTGEDG E+S
Sbjct: 156 EGTLLAIQGPKAQEILQQFTNEDLSKIYFGQTKFLKLSPIGATVYLARSGYTGEDGFELS 215
Query: 526 VPG------EQCTHIVEALLSD--EDVKLAGLGARDSL 555
+P +Q L+++ + VK GL ARDSL
Sbjct: 216 IPSTTPEESKQALDFFYTLINEYPDVVKPIGLAARDSL 253
>TIGR_CMR|SPO_A0057 [details] [associations]
symbol:SPO_A0057 "glycine cleavage system T protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR KO:K00605
PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
OMA:QRYAMFT RefSeq:YP_164888.1 ProteinModelPortal:Q5LLH0
GeneID:3196668 KEGG:sil:SPOA0057 PATRIC:23381418 Uniprot:Q5LLH0
Length = 365
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 100/234 (42%), Positives = 130/234 (55%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLYDLH+ GGKMV FAG+ MPVQY + I H R K ++FDVSHM Q ++ G
Sbjct: 6 KRTPLYDLHVELGGKMVDFAGWEMPVQY-PMGIMGEHKQCREKAALFDVSHMGQVILRGD 64
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
LE +C L GK FTN +GGI DDLIV+ E F+V NA+ R D
Sbjct: 65 DIGAKLEKLCPQVFLTLPEGKARYGFFTNAEGGIMDDLIVSNAGE-YFFVVVNAALRHQD 123
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
+ + A D G ++ F +R L+AVQGP + ++ R L FM +
Sbjct: 124 IPHLAAHLD-----GVEVTEIF----DRALVAVQGPSAEDVVGRLCPA-ARDLKFMETML 173
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
I G+ C ++R GYTGEDG EIS+P + I L+ ED + AGLGARDSL
Sbjct: 174 GEIDGVDCRISRLGYTGEDGYEISIPEGEAIRISRLFLAHEDCEPAGLGARDSL 227
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 39/88 (44%), Positives = 52/88 (59%)
Query: 468 ERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 527
+R L+AVQGP + ++ R L FM + I G+ C ++R GYTGEDG EIS+P
Sbjct: 141 DRALVAVQGPSAEDVVGRLCPA-ARDLKFMETMLGEIDGVDCRISRLGYTGEDGYEISIP 199
Query: 528 GEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ I L+ ED + AGLGARDSL
Sbjct: 200 EGEAIRISRLFLAHEDCEPAGLGARDSL 227
Score = 164 (62.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 39/107 (36%), Positives = 52/107 (48%)
Query: 13 KRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTG-VPIRPGYEIFNANDQRVGAITSGCP 71
KRRRE GGFPGA I +I G RK G G P R EI + + +G ITSG
Sbjct: 257 KRRREEGGFPGAGRILKEIAEGAPRKLVGIKPEGRAPARQHVEIQSLGGETIGEITSGGF 316
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNY 118
P++ +AMGY+ A++ G ++ +PFV NY
Sbjct: 317 GPTVGAPVAMGYVASAHAAPGEKVNLIIRGKAQPAEIVALPFVAQNY 363
>SGD|S000002426 [details] [associations]
symbol:GCV1 "T subunit of the mitochondrial glycine
decarboxylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0006544 "glycine
metabolic process" evidence=IMP] [GO:0004375 "glycine dehydrogenase
(decarboxylating) activity" evidence=ISS;IMP] [GO:0006730
"one-carbon metabolic process" evidence=IGI;IMP] [GO:0006546
"glycine catabolic process" evidence=IEA;IC] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005960 "glycine cleavage complex" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 SGD:S000002426 GO:GO:0005739 GO:GO:0008483
EMBL:BK006938 GO:GO:0006730 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:X95966 EMBL:Z49770
GO:GO:0005960 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
GeneTree:ENSGT00510000047333 OMA:KPAFWGR OrthoDB:EOG4WT0K6
EMBL:L41522 EMBL:Z74315 PIR:S54642 RefSeq:NP_010302.1
ProteinModelPortal:P48015 SMR:P48015 IntAct:P48015 STRING:P48015
PaxDb:P48015 PeptideAtlas:P48015 EnsemblFungi:YDR019C GeneID:851582
KEGG:sce:YDR019C CYGD:YDR019c NextBio:969049 Genevestigator:P48015
GermOnline:YDR019C Uniprot:P48015
Length = 400
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 95/244 (38%), Positives = 138/244 (56%)
Query: 194 SAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVV 253
S ++T L+DLH+S GG MVP+AG+SMPV Y + SH TR+ +FDVSHMLQ+ +
Sbjct: 14 STLKKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNAGLFDVSHMLQSKL 73
Query: 254 TGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLF-LVSNASR 312
+G H ++L+ + D + L G GTLS+ N QGG+ DD I+TK +D+ F +V+NA
Sbjct: 74 SGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKENDDNEFYIVTNAGC 133
Query: 313 RKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ-----RHTDLDLS 367
+ D + D ++ G + Q+ E R L+A+QGP + +L+ DL
Sbjct: 134 AERDTEFF---HDELQN-GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPGKDLK 189
Query: 368 SLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGA 426
L+F + G + R GYTGEDG EIS+ E+ E LL++ +K GL A
Sbjct: 190 ELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPIGLAA 249
Query: 427 RDSL 430
RDSL
Sbjct: 250 RDSL 253
Score = 144 (55.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 41/128 (32%), Positives = 60/128 (46%)
Query: 434 ITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSPEERGLIAVQGPLSSTILQ-----RHTD 488
I N + +D ++ G + Q+ E R L+A+QGP + +L+
Sbjct: 127 IVTNAGCAERDTEFFHDELQN-GSTLDCQWKIIEGRSLLALQGPKAKDVLEPLLSKTAPG 185
Query: 489 LDLSSLYFMTSRPCTIA-GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLA 547
DL L+F + G + R GYTGEDG EIS+ E+ E LL++ +K
Sbjct: 186 KDLKELFFGQRHEFALKDGSLVQIARGGYTGEDGFEISIANEKAVEFAEQLLANPVMKPI 245
Query: 548 GLGARDSL 555
GL ARDSL
Sbjct: 246 GLAARDSL 253
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 34/104 (32%), Positives = 48/104 (46%)
Query: 21 FPGASIIQSQIKSGV-SRKRTGFT--STGVPIRPGYEIFNAN-DQRVGAITSGCPSPSLK 76
F G + I Q+ + S+ R GF G R G +IF + + VG +TSG SP+L
Sbjct: 295 FNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLN 354
Query: 77 K-NIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYY 119
NI Y++ Y K G +L KMP V ++YY
Sbjct: 355 NINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYY 398
>UNIPROTKB|C9JXJ4 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571 GO:GO:0005737
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 PANTHER:PTHR13847:SF5
HOGENOM:HOG000239380 IPI:IPI00925396 HGNC:HGNC:473 ChiTaRS:AMT
ProteinModelPortal:C9JXJ4 SMR:C9JXJ4 STRING:C9JXJ4
Ensembl:ENST00000430521 ArrayExpress:C9JXJ4 Bgee:C9JXJ4
Uniprot:C9JXJ4
Length = 262
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 91/185 (49%), Positives = 119/185 (64%)
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
QT + G R + +ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSN
Sbjct: 30 QTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSN 89
Query: 310 ASRRKVDMDLMVAAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL 366
A + D+ LM QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL
Sbjct: 90 AGCWEKDLALM---QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDL 143
Query: 367 SSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLG 425
L FMTS + G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL
Sbjct: 144 RKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLA 203
Query: 426 ARDSL 430
ARDSL
Sbjct: 204 ARDSL 208
Score = 229 (85.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 53/115 (46%), Positives = 71/115 (61%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 97 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 208
>TIGR_CMR|CHY_0489 [details] [associations]
symbol:CHY_0489 "glycine cleavage system T protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004047 "aminomethyltransferase activity" evidence=ISS]
[GO:0019464 "glycine decarboxylation via glycine cleavage system"
evidence=ISS] InterPro:IPR006222 InterPro:IPR006223
InterPro:IPR022903 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
TIGRFAMs:TIGR00528 HAMAP:MF_00259 RefSeq:YP_359347.1 HSSP:P27248
ProteinModelPortal:Q3AET7 SMR:Q3AET7 STRING:Q3AET7 GeneID:3727042
KEGG:chy:CHY_0489 PATRIC:21274127 OMA:KPAFWGR
BioCyc:CHYD246194:GJCN-490-MONOMER Uniprot:Q3AET7
Length = 360
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 94/234 (40%), Positives = 128/234 (54%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+RTPLY+ H+ G KMVPF G+ MPVQY I H+ R+ V +FDVSHM + +TGK
Sbjct: 5 KRTPLYEEHIKLGAKMVPFGGWEMPVQY--TGILEEHMAVRTDVGMFDVSHMGEIEITGK 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
E ++ + DV L+ G + GG DDL+ K + LV NA+ + D
Sbjct: 63 QAERFVNYLITNDVSRLNSGDVIYTTMCYPDGGTVDDLLAYKYSTERYLLVVNAANK--D 120
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 376
DL Q R+ D+ + LS +E IA+QGP + ILQ+ T DL+ + +
Sbjct: 121 KDLAHILQYRWD----DVTVTDLS-DETAEIALQGPRAQEILQKLTAFDLNQIKYFGFAE 175
Query: 377 CTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+AG+PC ++R GYTGEDG EI T I LL+ VK AGLGARD+L
Sbjct: 176 IEVAGVPCLVSRTGYTGEDGFEIYFAPNLATKIWNELLN-LGVKPAGLGARDTL 228
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 43/98 (43%), Positives = 58/98 (59%)
Query: 458 DIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYT 517
D+ + LS +E IA+QGP + ILQ+ T DL+ + + +AG+PC ++R GYT
Sbjct: 133 DVTVTDLS-DETAEIALQGPRAQEILQKLTAFDLNQIKYFGFAEIEVAGVPCLVSRTGYT 191
Query: 518 GEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
GEDG EI T I LL+ VK AGLGARD+L
Sbjct: 192 GEDGFEIYFAPNLATKIWNELLN-LGVKPAGLGARDTL 228
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 21 FPGASIIQSQIKSGVSRKRTGFTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 79
F G + +Q +G+ RK G G I R GYEI N + VG +TSG +P LKKN+
Sbjct: 263 FIGKEALLAQKNAGLKRKIVGLEMIGAGIPRQGYEIV-FNQRGVGFVTSGTFAPFLKKNL 321
Query: 80 AMGYIEPAYSKVGVEL 95
AM ++ +++G E+
Sbjct: 322 AMAMVDLEAAEIGTEV 337
>UNIPROTKB|B4DGG9 [details] [associations]
symbol:AMT "Aminomethyltransferase" species:9606 "Homo
sapiens" [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0008483 "transaminase activity" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528
HOVERGEN:HBG005822 UniGene:Hs.102 HGNC:HGNC:473 ChiTaRS:AMT
EMBL:AK294592 IPI:IPI01015421 SMR:B4DGG9 STRING:B4DGG9
Ensembl:ENST00000546031 Uniprot:B4DGG9
Length = 306
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 87/173 (50%), Positives = 113/173 (65%)
Query: 262 LESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMV 321
+ES+ V D+ EL P +GTLSLFTNE GGI DDLIVT T E L++VSNA + D+ LM
Sbjct: 1 MESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDLALM- 59
Query: 322 AAQDRFKSL---GKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCT 378
QD+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 60 --QDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAVME 114
Query: 379 IAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 115 VFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 167
Score = 259 (96.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 51/109 (46%), Positives = 63/109 (57%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFTSTGVPIRPGYEIFNANDQRVGAITSGCP 71
GKRRR FPGA +I Q+K V R+R G G P+R I N ++G +TSGCP
Sbjct: 196 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 255
Query: 72 SPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYYT 120
SPSLKKN+AMGY+ YS+ G L +KMPFV +NYYT
Sbjct: 256 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 304
Score = 229 (85.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 53/115 (46%), Positives = 71/115 (61%)
Query: 445 LKLSNDRFKSL---GKDIHLQFLSPEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRP 501
L L D+ + L G+D+ L+ L + L+A+QGP ++ +LQ DL L FMTS
Sbjct: 56 LALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 112
Query: 502 CTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 555
+ G+ C +TR GYTGEDGVEISVP H+ A+L + +VKLAGL ARDSL
Sbjct: 113 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSL 167
>TIGR_CMR|BA_4449 [details] [associations]
symbol:BA_4449 "glycine cleavage system T protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 TIGRFAMs:TIGR00528
RefSeq:NP_846677.1 RefSeq:YP_021093.1 RefSeq:YP_030380.1
ProteinModelPortal:Q81M06 SMR:Q81M06 IntAct:Q81M06 DNASU:1087845
EnsemblBacteria:EBBACT00000011986 EnsemblBacteria:EBBACT00000017692
EnsemblBacteria:EBBACT00000020316 GeneID:1087845 GeneID:2818765
GeneID:2849651 KEGG:ban:BA_4449 KEGG:bar:GBAA_4449 KEGG:bat:BAS4131
HOGENOM:HOG000239381 OMA:LGARDVC ProtClustDB:PRK00389
BioCyc:BANT260799:GJAJ-4187-MONOMER
BioCyc:BANT261594:GJ7F-4328-MONOMER HAMAP:MF_00259 Uniprot:Q81M06
Length = 366
Score = 345 (126.5 bits), Expect = 3.8e-31, P = 3.8e-31
Identities = 93/258 (36%), Positives = 136/258 (52%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
QRTPL+D++ +GGK + F G+ +PVQ+ SI H R+ +FDVSHM + V G
Sbjct: 5 QRTPLFDVYAKYGGKTIDFGGWELPVQFS--SIKEEHEAVRTAAGLFDVSHMGEVEVKGV 62
Query: 257 HREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+L+ + DV L G + E GG DDL++ K E+ LV NAS + D
Sbjct: 63 DSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKD 122
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSR 375
+ + + +G D + +S+E L A+QGP + ILQ+ DL + +F
Sbjct: 123 YEWLAS-----HVIG-DATVVNVSSEVAQL-AIQGPKAEGILQKVVSEDLKEIKFFKFKN 175
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSLSG 432
+ GIP ++R GYTGEDG EI E + E LL ++E +K GLGARD+L
Sbjct: 176 DILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRF 235
Query: 433 DITLNTPVPHGSLKLSND 450
+ TL P+ +G +LS D
Sbjct: 236 EATL--PL-YGQ-ELSKD 249
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/88 (40%), Positives = 50/88 (56%)
Query: 472 IAVQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 530
+A+QGP + ILQ+ DL + +F + GIP ++R GYTGEDG EI E
Sbjct: 146 LAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSED 205
Query: 531 CTHIVEALL---SDEDVKLAGLGARDSL 555
+ E LL ++E +K GLGARD+L
Sbjct: 206 AAKLWEKLLEVGAEEGLKACGLGARDTL 233
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 10 FPGKRRRETGGFPGASIIQSQIKSGVSRKRTGFT--STGVPIRPGYEIFNANDQRVGAIT 67
F K +E F G + ++ Q ++G RK G G+P R Y +F ++++G +T
Sbjct: 259 FAVKTNKEADFF-GKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVF-IGEEKIGEVT 315
Query: 68 SGCPSPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVK 115
SG SP+LKK+I + I+ Y+ V E+ PF K
Sbjct: 316 SGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKRVKAVVVPTPFYK 363
>UNIPROTKB|P64220 [details] [associations]
symbol:gcvT "Aminomethyltransferase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0040007 GO:GO:0005618
GO:GO:0008483 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842579 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 OMA:KPAFWGR PIR:D70786
RefSeq:NP_216727.1 RefSeq:NP_336739.1 RefSeq:YP_006515631.1
ProteinModelPortal:P64220 SMR:P64220
EnsemblBacteria:EBMYCT00000003464 EnsemblBacteria:EBMYCT00000070612
GeneID:13318900 GeneID:887233 GeneID:924158 KEGG:mtc:MT2267
KEGG:mtu:Rv2211c KEGG:mtv:RVBD_2211c PATRIC:18126736
TubercuList:Rv2211c Uniprot:P64220
Length = 367
Score = 303 (111.7 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 88/256 (34%), Positives = 131/256 (51%)
Query: 200 PLYDLHLSHGGKMVPFAGFSMPVQY-GAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
PL D H G F G+ MPV Y G VS H TR+ V +FDVSH+ + +V G
Sbjct: 11 PLEDRHRELGASFAEFGGWLMPVSYAGTVS---EHNATRTAVGLFDVSHLGKALVRGPGA 67
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+++ S D+ + PGK +L E GG+ DDLI +D +FLV NA+ +
Sbjct: 68 AQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIFLVPNAANTAAVVG 127
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDL-SSLYFMTSRPC 377
+ AA S+ ++H + ++AVQGP S+ +L T L L + + +M
Sbjct: 128 ALQAAAPGGLSI-TNLHRSY------AVLAVQGPCSTDVL---TALGLPTEMDYMGYADA 177
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDV---KLAGLGARDSLSGDI 434
+ +G+P + R GYTGE G E+ P E + +ALL+ + AGLGARD+L +
Sbjct: 178 SYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLRTE- 236
Query: 435 TLNTPVPHGSLKLSND 450
+ P+ HG +LS D
Sbjct: 237 -MGYPL-HGH-ELSLD 249
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/89 (38%), Positives = 51/89 (57%)
Query: 471 LIAVQGPLSSTILQRHTDLDL-SSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGE 529
++AVQGP S+ +L T L L + + +M + +G+P + R GYTGE G E+ P E
Sbjct: 148 VLAVQGPCSTDVL---TALGLPTEMDYMGYADASYSGVPVRVCRTGYTGEHGYELLPPWE 204
Query: 530 QCTHIVEALLSDEDV---KLAGLGARDSL 555
+ +ALL+ + AGLGARD+L
Sbjct: 205 SAGVVFDALLAAVSAAGGEPAGLGARDTL 233
>TIGR_CMR|GSU_0375 [details] [associations]
symbol:GSU_0375 "glycine cleavage system T protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
OMA:QRYAMFT RefSeq:NP_951434.1 ProteinModelPortal:Q74G72
GeneID:2685714 KEGG:gsu:GSU0375 PATRIC:22023494
ProtClustDB:CLSK924396 BioCyc:GSUL243231:GH27-391-MONOMER
Uniprot:Q74G72
Length = 362
Score = 281 (104.0 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 80/233 (34%), Positives = 115/233 (49%)
Query: 199 TPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHR 258
TPL H M PF G++MP+QY I A H R K S+FD+ HM + + TG
Sbjct: 7 TPLRIEHERLNALMAPFGGWNMPIQYEG--IIAEHRWCREKASLFDICHMGEFLFTGDII 64
Query: 259 EEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMD 318
+ LE + V + G+ N GGI DDLIV + ++ +V NA+ + D
Sbjct: 65 ADGLEDVFTFSVASIPVGRSRYGFLLNGDGGIMDDLIVFRLAQNEAMVVVNAAT--IGKD 122
Query: 319 LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL-YFMTSRPC 377
A R G Q +SA L +QGPLS +L +++++ YF R
Sbjct: 123 F-AAISARLGGGG----FQDISAATAKL-DLQGPLSREVLVEVIGPEIAAIPYFKFIRT- 175
Query: 378 TIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+ G ++R GYTGE G EI +P ++ + + LL+D V+ AGLGARD L
Sbjct: 176 KVLGADAIVSRTGYTGELGYEIFLPSDRVVELWQRLLADPRVRPAGLGARDVL 228
Score = 134 (52.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 474 VQGPLSSTILQRHTDLDLSSL-YFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCT 532
+QGPLS +L +++++ YF R + G ++R GYTGE G EI +P ++
Sbjct: 147 LQGPLSREVLVEVIGPEIAAIPYFKFIRT-KVLGADAIVSRTGYTGELGYEIFLPSDRVV 205
Query: 533 HIVEALLSDEDVKLAGLGARDSL 555
+ + LL+D V+ AGLGARD L
Sbjct: 206 ELWQRLLADPRVRPAGLGARDVL 228
>TIGR_CMR|CPS_1274 [details] [associations]
symbol:CPS_1274 "glycine cleavage system T protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 HSSP:P27248 RefSeq:YP_268017.1
ProteinModelPortal:Q486J8 SMR:Q486J8 STRING:Q486J8 GeneID:3522650
KEGG:cps:CPS_1274 PATRIC:21465783 OMA:WSIAWEP
BioCyc:CPSY167879:GI48-1355-MONOMER Uniprot:Q486J8
Length = 362
Score = 280 (103.6 bits), Expect = 7.1e-24, P = 7.1e-24
Identities = 84/242 (34%), Positives = 120/242 (49%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T L+ HL+ G KMV F G+ MP+ YG+ I H R+ +FDVSHM V G
Sbjct: 4 KTVLHAKHLASGAKMVDFFGWDMPINYGS-QIEEHHA-VRTDAGMFDVSHMTIVDVQGAD 61
Query: 258 REEWLESICVADVHEL-DPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVD 316
+ +L + + DV +L PGK + NE+GG+ DDLI+ + LV N++ R D
Sbjct: 62 AKAFLRRLVINDVAKLATPGKALYTGMLNEEGGVIDDLIIYFFSDTDYRLVVNSATRVKD 121
Query: 317 MDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGP-LSSTILQRHTDLDLSSLYFMTSR 375
+ M +S G DI + E G++AVQGP + + + T + ++ M
Sbjct: 122 LAWMTK-----QSTGFDITIT--ERPEFGMLAVQGPEAKAKVAKLLTAEQIEAVEGMKPF 174
Query: 376 PCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDIT 435
G + GYTGEDG EI VP + LL DE V GLGARD+L +
Sbjct: 175 FGVQVG-DLFIATTGYTGEDGYEIIVPNNSAEDFWQKLL-DEGVVPCGLGARDTLRLEAG 232
Query: 436 LN 437
+N
Sbjct: 233 MN 234
>UNIPROTKB|P27248 [details] [associations]
symbol:gcvT species:83333 "Escherichia coli K-12"
[GO:0019464 "glycine decarboxylation via glycine cleavage system"
evidence=ISS] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA;ISS;IDA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008483
"transaminase activity" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U28377 GO:GO:0004047 InterPro:IPR013977 Pfam:PF08669
GO:GO:0019464 KO:K00605 PANTHER:PTHR13847:SF5 EMBL:X73958
EMBL:M97263 PDB:3A8I PDB:3A8J PDB:3A8K PDBsum:3A8I PDBsum:3A8J
PDBsum:3A8K eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528
HOGENOM:HOG000239381 ProtClustDB:PRK00389 HAMAP:MF_00259 PIR:A56689
RefSeq:NP_417381.1 RefSeq:YP_491106.1 PDB:1VLO PDBsum:1VLO
ProteinModelPortal:P27248 SMR:P27248 IntAct:P27248 PaxDb:P27248
PRIDE:P27248 EnsemblBacteria:EBESCT00000001707
EnsemblBacteria:EBESCT00000016229 GeneID:12933349 GeneID:947390
KEGG:ecj:Y75_p2837 KEGG:eco:b2905 PATRIC:32121224 EchoBASE:EB1412
EcoGene:EG11442 BioCyc:EcoCyc:GCVT-MONOMER
BioCyc:ECOL316407:JW2873-MONOMER BioCyc:MetaCyc:GCVT-MONOMER
EvolutionaryTrace:P27248 Genevestigator:P27248 Uniprot:P27248
Length = 364
Score = 277 (102.6 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 83/243 (34%), Positives = 120/243 (49%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
Q+TPLY+ H G +MV F G+ MP+ YG+ I H R+ +FDVSHM + G
Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGS-QIDEHHA-VRTDAGMFDVSHMTIVDLRGS 60
Query: 257 HREEWLESICVADVHELDP-GKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
E+L + DV +L GK S N GG+ DDLIV ED LV N++ R+
Sbjct: 61 RTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGP-LSSTILQRHTDLDLSSLYFMTS 374
D+ + + F G +I ++ ++ +IAVQGP + D ++ M
Sbjct: 121 DLSWITQHAEPF---GIEITVR----DDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKP 173
Query: 375 RPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLSGDI 434
AG + GYTGE G EI++P E+ AL+ + VK GLGARD+L +
Sbjct: 174 FFGVQAG-DLFIATTGYTGEAGYEIALPNEKAADFWRALV-EAGVKPCGLGARDTLRLEA 231
Query: 435 TLN 437
+N
Sbjct: 232 GMN 234
>TIGR_CMR|CBU_1716 [details] [associations]
symbol:CBU_1716 "glycine cleavage system T protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 RefSeq:NP_820697.2
ProteinModelPortal:Q83B06 SMR:Q83B06 PRIDE:Q83B06 GeneID:1209627
KEGG:cbu:CBU_1716 PATRIC:17932163
BioCyc:CBUR227377:GJ7S-1688-MONOMER Uniprot:Q83B06
Length = 363
Score = 272 (100.8 bits), Expect = 5.4e-23, P = 5.4e-23
Identities = 84/247 (34%), Positives = 117/247 (47%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGK 256
+ +PLY+ H V FAG+ MP+ YG S H R + +FDVSHM + G+
Sbjct: 3 RHSPLYEEHAKAKAHFVDFAGWEMPLHYG--SQIEEHHQVRQRAGIFDVSHMGVIDLEGE 60
Query: 257 HREEWLESICVADVHEL-DPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKV 315
+L + DV +L D G+ + N QGG+ DDLIV + LV NA+ R
Sbjct: 61 EATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGYRLVVNAATR-- 118
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTS- 374
D D+ A + K G + + E ++AVQGP I + D +LY
Sbjct: 119 DKDI---AWIKEKGAGYKVSIS--ERPEMCILAVQGP--QAIAAAKSIFD-EALYAQLEA 170
Query: 375 -RPCTIAGIPCT---LTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSL 430
+P P + R GYTGEDG+EI VP + T + A + VK GLGARD+L
Sbjct: 171 LKPFHFISSPTRDLQIARTGYTGEDGLEIIVPASRATDLW-ARFVHQGVKPCGLGARDTL 229
Query: 431 SGDITLN 437
+ LN
Sbjct: 230 RLEAGLN 236
>TIGR_CMR|SO_0779 [details] [associations]
symbol:SO_0779 "glycine cleavage system T protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0005960
"glycine cleavage complex" evidence=ISS] [GO:0006546 "glycine
catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 RefSeq:NP_716410.1
ProteinModelPortal:Q8EIQ8 SMR:Q8EIQ8 GeneID:1168634
KEGG:son:SO_0779 PATRIC:23521231 Uniprot:Q8EIQ8
Length = 364
Score = 254 (94.5 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 83/246 (33%), Positives = 121/246 (49%)
Query: 198 RTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKH 257
+T L++ HL KMV F G+ MP+ YG+ I H R +FDVSHM VTG
Sbjct: 4 KTVLFNKHLESNAKMVDFHGWDMPLNYGS-QIEEHHA-VRQDAGMFDVSHMTVVDVTGTD 61
Query: 258 REEWLESICVADVHELD-PGKGTLSLFTNEQGGIQDDLIVTKTLEDSLF-LVSNASRRKV 315
+L + DV +L PGK ++ GI DDLI T L D+ + +V N++ R+
Sbjct: 62 ACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLI-TYYLTDTFYRVVVNSATREK 120
Query: 316 DMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGP----LSSTILQRHTDLDLSSLYF 371
D+ +A Q S G D+ + E +IAVQGP ++ + + + +
Sbjct: 121 DL-AWIAKQ----SQGFDVTVT--ERPELAMIAVQGPNAKAKAAAVFSSEQNAAIEGMKP 173
Query: 372 MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSDEDVKLAGLGARDSLS 431
+ AG + GYTGE G EI VP + + +ALL D+ VK GLGARD+L
Sbjct: 174 FFGKQ---AG-SLFIATTGYTGEAGYEIIVPETEAEALWQALL-DQGVKPCGLGARDTLR 228
Query: 432 GDITLN 437
+ +N
Sbjct: 229 LEAGMN 234
>GENEDB_PFALCIPARUM|PF13_0345 [details] [associations]
symbol:PF13_0345 "aminomethyltransferase,
mitochondrial precursor" species:5833 "Plasmodium falciparum"
[GO:0005739 "mitochondrion" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739
EMBL:AL844509 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380
OMA:KPAFWGR ProtClustDB:CLSZ2429438 RefSeq:XP_001350365.1
ProteinModelPortal:Q8I6T0 PRIDE:Q8I6T0
EnsemblProtists:PF13_0345:mRNA GeneID:814304 KEGG:pfa:PF13_0345
EuPathDB:PlasmoDB:PF3D7_1365500 Uniprot:Q8I6T0
Length = 406
Score = 239 (89.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 77/261 (29%), Positives = 126/261 (48%)
Query: 183 LTFV---FSPGSSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRS 238
LTF FS + P E ++T LYD H + GF +P +Y +++ S+LHTR+
Sbjct: 11 LTFFRKGFSTTNKPKVEIKKTILYDSHKKNNAIFKIQHGFYLPDEYKDITLITSNLHTRT 70
Query: 239 KVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK 298
S+FD ++ ++G+ + ++E +D+ L + +SL N++GGI DD+++
Sbjct: 71 NCSLFDYTYRPILKISGEDKINFIEKYVGSDIKGLWENECRISLLLNDKGGIIDDIMIIL 130
Query: 299 TLEDSLFLVSNAS-RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTI 357
E L L N + KV L +D+ GK + +Q I +QG SS +
Sbjct: 131 R-EKYLLLYLNIQCKEKVYKYL----KDKLLENGK-LQVQIEEFTSHSSICIQGSKSSDV 184
Query: 358 LQRHTDLD-------LSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHI 409
L+ D + L + FM+S I I C L R TGEDG +I +P + +
Sbjct: 185 LKELIDYNNESVETNLDNCSFMSSTLTKINKIDNCILNRYTCTGEDGFDILIPNKYVNDL 244
Query: 410 VEALLSDEDVKLAGLGARDSL 430
+L +E VK GL +++L
Sbjct: 245 YNLILKNELVKPGGLAVQNTL 265
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 37/111 (33%), Positives = 56/111 (50%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNAN--DQRVGAITS 68
G+RR + F GA II QIK+G KR G +T + + +I++ +Q +G ITS
Sbjct: 294 GQRRLKELNFNGAHIIMDQIKNGTKIKRVGILINTNIVPKENTKIYSHENAEQIIGYITS 353
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYY 119
SP L+K I MGY++ Y+ + + TK+PFV + Y
Sbjct: 354 SVFSPVLQKPICMGYVKSEYAHINNLIKVDCLNKLEIAQITKLPFVPLSIY 404
>UNIPROTKB|Q8I6T0 [details] [associations]
symbol:PF13_0345 "Aminomethyltransferase, mitochondrial"
species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739 EMBL:AL844509
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
KO:K00605 PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 OMA:KPAFWGR
ProtClustDB:CLSZ2429438 RefSeq:XP_001350365.1
ProteinModelPortal:Q8I6T0 PRIDE:Q8I6T0
EnsemblProtists:PF13_0345:mRNA GeneID:814304 KEGG:pfa:PF13_0345
EuPathDB:PlasmoDB:PF3D7_1365500 Uniprot:Q8I6T0
Length = 406
Score = 239 (89.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 77/261 (29%), Positives = 126/261 (48%)
Query: 183 LTFV---FSPGSSPSAE-QRTPLYDLHLSHGGKMVPFAGFSMPVQYGAVSITASHLHTRS 238
LTF FS + P E ++T LYD H + GF +P +Y +++ S+LHTR+
Sbjct: 11 LTFFRKGFSTTNKPKVEIKKTILYDSHKKNNAIFKIQHGFYLPDEYKDITLITSNLHTRT 70
Query: 239 KVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTK 298
S+FD ++ ++G+ + ++E +D+ L + +SL N++GGI DD+++
Sbjct: 71 NCSLFDYTYRPILKISGEDKINFIEKYVGSDIKGLWENECRISLLLNDKGGIIDDIMIIL 130
Query: 299 TLEDSLFLVSNAS-RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTI 357
E L L N + KV L +D+ GK + +Q I +QG SS +
Sbjct: 131 R-EKYLLLYLNIQCKEKVYKYL----KDKLLENGK-LQVQIEEFTSHSSICIQGSKSSDV 184
Query: 358 LQRHTDLD-------LSSLYFMTSRPCTIAGIP-CTLTRAGYTGEDGVEISVPGEQCTHI 409
L+ D + L + FM+S I I C L R TGEDG +I +P + +
Sbjct: 185 LKELIDYNNESVETNLDNCSFMSSTLTKINKIDNCILNRYTCTGEDGFDILIPNKYVNDL 244
Query: 410 VEALLSDEDVKLAGLGARDSL 430
+L +E VK GL +++L
Sbjct: 245 YNLILKNELVKPGGLAVQNTL 265
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 37/111 (33%), Positives = 56/111 (50%)
Query: 12 GKRRRETGGFPGASIIQSQIKSGVSRKRTGFT-STGVPIRPGYEIFNAN--DQRVGAITS 68
G+RR + F GA II QIK+G KR G +T + + +I++ +Q +G ITS
Sbjct: 294 GQRRLKELNFNGAHIIMDQIKNGTKIKRVGILINTNIVPKENTKIYSHENAEQIIGYITS 353
Query: 69 GCPSPSLKKNIAMGYIEPAYSKVGVELWXXXXXXXXXXXXTKMPFVKSNYY 119
SP L+K I MGY++ Y+ + + TK+PFV + Y
Sbjct: 354 SVFSPVLQKPICMGYVKSEYAHINNLIKVDCLNKLEIAQITKLPFVPLSIY 404
>ASPGD|ASPL0000076695 [details] [associations]
symbol:AN8654 species:162425 "Emericella nidulans"
[GO:0004047 "aminomethyltransferase activity" evidence=RCA]
[GO:0006520 "cellular amino acid metabolic process" evidence=RCA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 EMBL:BN001303
EMBL:AACD01000158 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 eggNOG:COG0665 HOGENOM:HOG000251716 RefSeq:XP_681923.1
ProteinModelPortal:Q5ASS6 SMR:Q5ASS6 STRING:Q5ASS6
EnsemblFungi:CADANIAT00006391 GeneID:2868571 KEGG:ani:AN8654.2
OMA:RRSPIHE OrthoDB:EOG4G4KZH Uniprot:Q5ASS6
Length = 948
Score = 176 (67.0 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 55/188 (29%), Positives = 91/188 (48%)
Query: 236 TRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLI 295
TR+ V+++D+S + +V+G L+ + DV ++ PG +L NE GGI D+
Sbjct: 589 TRNAVAMYDMSSFHRFIVSGPGAVALLQGLGTVDV-DVRPGTIVYALLLNENGGIYSDVF 647
Query: 296 VTKTLEDSLFLVSNASRRKVDMDLMVAAQDRF---KSLGKDIHLQFLSAEERGLIAVQGP 352
VT+ F + D+ + A + R+ KS +H++ ++ I + GP
Sbjct: 648 VTRL---GSFTYQIGANTATDLAYL-ARKARYQTQKSPADWVHVEDVTGGTCA-IGLWGP 702
Query: 353 LSSTILQ-----RHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCT 407
++ +L R TD+ SL +M ++ TIA IP TL R Y GE G EI E
Sbjct: 703 RAADVLHSLPLPRETDISNKSLPYMRAKAVTIASIPVTLFRKSYVGEYGWEIQTSAEHGA 762
Query: 408 HIVEALLS 415
+ EA+ +
Sbjct: 763 RLWEAIFN 770
Score = 49 (22.3 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 189 PGSSPSAEQRTPLYDLHLSHGGKMVPFAGFSMPVQYGA 226
P SP + +P Y + G + G+ P YGA
Sbjct: 516 PRESPRNLRVSPFYAQQMQLGAVFMELGGWERPFWYGA 553
>UNIPROTKB|F1NBJ7 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005739 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 OMA:PHHDVIK EMBL:AADN02026458
EMBL:AADN02026459 EMBL:AADN02026460 EMBL:AADN02026461
IPI:IPI00571388 ProteinModelPortal:F1NBJ7
Ensembl:ENSGALT00000004499 Uniprot:F1NBJ7
Length = 906
Score = 171 (65.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 61/212 (28%), Positives = 104/212 (49%)
Query: 234 LHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDD 293
L R+ V++F++S+ + + G + + ADV + PG + N++GG++ D
Sbjct: 550 LTCRNAVALFNMSYFGKFYLVGPEATKAANWLFSADVSKA-PGSTVYTCMLNKRGGVESD 608
Query: 294 LIVTKTLE-DSLFLVSNASRRK---VDMDLMVAAQD--RFKSLGKDIHLQFL---SAEER 344
L V++ D ++ A + + + VA + ++ +D+ LQ +EE
Sbjct: 609 LTVSRISPGDPSSPLAPAFQGDGYYLAIGGAVAQHNWSHITAVLQDMKLQCKLIDCSEEL 668
Query: 345 GLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVP 402
G++++QGPLS T+LQ D DLS+ F T R AG R + GE G E+ VP
Sbjct: 669 GMMSLQGPLSRTVLQELLDTDLSNEAFPFSTHRLVKAAGCTVRAMRLSFVGELGWELHVP 728
Query: 403 GEQCTHIVEALL---SDEDVKLAGLGARDSLS 431
E C + +A++ + + AG A DSLS
Sbjct: 729 REDCVRVYQAVMEAGARHGITNAGYRAIDSLS 760
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/94 (38%), Positives = 50/94 (53%)
Query: 467 EERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 524
EE G++++QGPLS T+LQ D DLS+ F T R AG R + GE G E+
Sbjct: 666 EELGMMSLQGPLSRTVLQELLDTDLSNEAFPFSTHRLVKAAGCTVRAMRLSFVGELGWEL 725
Query: 525 SVPGEQCTHIVEALL---SDEDVKLAGLGARDSL 555
VP E C + +A++ + + AG A DSL
Sbjct: 726 HVPREDCVRVYQAVMEAGARHGITNAGYRAIDSL 759
>ZFIN|ZDB-GENE-040426-996 [details] [associations]
symbol:sardh "sarcosine dehydrogenase" species:7955
"Danio rerio" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
ZFIN:ZDB-GENE-040426-996 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 EMBL:AL935290 EMBL:BX323065
EMBL:BX537125 EMBL:CU524648 IPI:IPI00481475
Ensembl:ENSDART00000080904 Ensembl:ENSDART00000131043
Uniprot:F1Q4Q8
Length = 924
Score = 167 (63.8 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 62/213 (29%), Positives = 105/213 (49%)
Query: 234 LHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDD 293
L R+ V+VFD+S+ + ++G ++ + + ADV++ PG + N++GG++ D
Sbjct: 559 LTCRNAVAVFDMSYFGKFYLSGPDAKKAADWLFTADVNKA-PGSTVYTCMLNQRGGVESD 617
Query: 294 LIVTKTLEDS---LFLVS--NASRRKVDMDLMVAAQD--RFKSLGKD--IHLQFLS-AEE 343
L V++ LE S L L N + + VA + +S+ +D + E+
Sbjct: 618 LTVSR-LEPSPSHLPLTPEFNGDAYYLAIGGGVAQHNWSHIQSVLQDQGFRCTLIDHTED 676
Query: 344 RGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 401
G+I++QGP S +LQ D +LS+ F T R + AG R + GE G E+ +
Sbjct: 677 MGMISIQGPKSRELLQEVLDSELSNEAFPFSTHRIVSAAGHQVRAMRLSFVGEMGWELHI 736
Query: 402 PGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
P E C + A+++ + AG A DSLS
Sbjct: 737 PKESCLPVYNAVMAAGAKYGICNAGYRAIDSLS 769
>TIGR_CMR|SPO_A0310 [details] [associations]
symbol:SPO_A0310 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR
HOGENOM:HOG000251716 ProtClustDB:CLSK863205 RefSeq:YP_165137.1
ProteinModelPortal:Q5LKS1 GeneID:3196699 KEGG:sil:SPOA0310
PATRIC:23381966 Uniprot:Q5LKS1
Length = 803
Score = 163 (62.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 67/260 (25%), Positives = 115/260 (44%)
Query: 236 TRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLI 295
TR+ V D+ Q +TG + L + + D G+ +L+ E+G + ++
Sbjct: 476 TRATAGVIDLCAFAQFEITGTDAGKLLNRLSANRIPHKD-GRMSLNHLLTEKGRFETEIT 534
Query: 296 VTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSS 355
+ + E+ F S +R D + + R G+D+ + SA+ G++A+ GP S
Sbjct: 535 IWRINENRYFTGSPITRANPDF-AWIKSHIR---PGEDVQMVNRSADW-GMLAMSGPASR 589
Query: 356 TILQRHTDLDLSSLYF--MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEAL 413
IL TD DLS+ F ++ + T+AG+PC R + GE G E+ + + +AL
Sbjct: 590 RILSELTDADLSNAAFPWLSGQEITVAGVPCYALRVSFVGELGWELHALLNRIPELYDAL 649
Query: 414 LSDEDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGK-DIHLQ-FLSPEERGL 471
DV A G D G N + + S + +G D+ L+ F+ E R
Sbjct: 650 F---DVGSAH-GLTDL--GSYAFNGMRMEKAYRASGELTTDIGPFDVGLERFVVTEGRDF 703
Query: 472 IAVQGPLSSTILQRHTDLDL 491
I + +LQR + +L
Sbjct: 704 IGKEA-----LLQRDPEWEL 718
>TIGR_CMR|CPS_2480 [details] [associations]
symbol:CPS_2480 "sarcosine oxidase, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008115
"sarcosine oxidase activity" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF01571 Pfam:PF07992 PIRSF:PIRSF037980
PRINTS:PR00368 PRINTS:PR00469 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0446 GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 RefSeq:YP_269196.1 RefSeq:YP_270692.1
ProteinModelPortal:Q47WX9 STRING:Q47WX9 GeneID:3521446
GeneID:3522790 KEGG:cps:CPS_2480 KEGG:cps:CPS_4034 PATRIC:21468029
HOGENOM:HOG000218134 KO:K00302 OMA:RECKAVR ProtClustDB:CLSK869336
BioCyc:CPSY167879:GI48-2543-MONOMER
BioCyc:CPSY167879:GI48-4047-MONOMER PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 Uniprot:Q47WX9
Length = 1007
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 53/213 (24%), Positives = 98/213 (46%)
Query: 218 FSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGK 277
F P + S+ L TR+ V + D S + + + GK E+L + +L GK
Sbjct: 645 FPQPGETMQQSLERECLATRNSVGILDASTLGKIDIQGKDAREFLNRVYTNPWSKLGVGK 704
Query: 278 GTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS--RRKVDMDLMVAAQDRFKSLGKDIH 335
+ E G + DD VT L+D+ F+++ + V L + Q + L +++
Sbjct: 705 CRYGVMCKEDGMVFDDG-VTVCLDDNRFIMTTTTGGAAGVLQWLELWHQTEWPEL--EVY 761
Query: 336 LQFLSAEERGLIAVQGPLSSTILQRHTDLDLS--SLYFMTSRPCTIAGIPCTLTRAGYTG 393
++ + + + GP S +L++ D+D+S S +M R T+AG+ + R +TG
Sbjct: 762 FSTVT-DHWSTMTISGPNSRKVLEKICDIDVSNDSFKYMDWRAATVAGVKARIFRISFTG 820
Query: 394 EDGVEISVPGEQCTHIVEALLS-DEDVKLAGLG 425
E EI+V H +A+++ E+ + G
Sbjct: 821 ELSFEINVQANYGMHAWKAVMAAGEEFNITPYG 853
>TIGR_CMR|CPS_4034 [details] [associations]
symbol:CPS_4034 "sarcosine oxidase, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008115
"sarcosine oxidase activity" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF01571 Pfam:PF07992 PIRSF:PIRSF037980
PRINTS:PR00368 PRINTS:PR00469 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0446 GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 RefSeq:YP_269196.1 RefSeq:YP_270692.1
ProteinModelPortal:Q47WX9 STRING:Q47WX9 GeneID:3521446
GeneID:3522790 KEGG:cps:CPS_2480 KEGG:cps:CPS_4034 PATRIC:21468029
HOGENOM:HOG000218134 KO:K00302 OMA:RECKAVR ProtClustDB:CLSK869336
BioCyc:CPSY167879:GI48-2543-MONOMER
BioCyc:CPSY167879:GI48-4047-MONOMER PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 Uniprot:Q47WX9
Length = 1007
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 53/213 (24%), Positives = 98/213 (46%)
Query: 218 FSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGK 277
F P + S+ L TR+ V + D S + + + GK E+L + +L GK
Sbjct: 645 FPQPGETMQQSLERECLATRNSVGILDASTLGKIDIQGKDAREFLNRVYTNPWSKLGVGK 704
Query: 278 GTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNAS--RRKVDMDLMVAAQDRFKSLGKDIH 335
+ E G + DD VT L+D+ F+++ + V L + Q + L +++
Sbjct: 705 CRYGVMCKEDGMVFDDG-VTVCLDDNRFIMTTTTGGAAGVLQWLELWHQTEWPEL--EVY 761
Query: 336 LQFLSAEERGLIAVQGPLSSTILQRHTDLDLS--SLYFMTSRPCTIAGIPCTLTRAGYTG 393
++ + + + GP S +L++ D+D+S S +M R T+AG+ + R +TG
Sbjct: 762 FSTVT-DHWSTMTISGPNSRKVLEKICDIDVSNDSFKYMDWRAATVAGVKARIFRISFTG 820
Query: 394 EDGVEISVPGEQCTHIVEALLS-DEDVKLAGLG 425
E EI+V H +A+++ E+ + G
Sbjct: 821 ELSFEINVQANYGMHAWKAVMAAGEEFNITPYG 853
>TIGR_CMR|SPO_2436 [details] [associations]
symbol:SPO_2436 "FAD dependent oxidoreductase/aminomethyl
transferase" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=ISS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_167653.1 ProteinModelPortal:Q5LQQ2
GeneID:3194123 KEGG:sil:SPO2436 PATRIC:23378269 OMA:FREVYDI
Uniprot:Q5LQQ2
Length = 812
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 52/199 (26%), Positives = 95/199 (47%)
Query: 237 RSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIV 296
R + D S + + +V G+ E +L+ C D+ L G+ +L N+ GGI+ D+ V
Sbjct: 479 RGAAGLIDYSMLGKLMVEGRDAEAFLQRACTNDM-ALPVGRVAYTLMLNDHGGIESDVTV 537
Query: 297 TKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSST 356
+ DS ++S S + D D + ++ + +D+ L+ ++ ++++ GP S
Sbjct: 538 ARHGPDSFMVMSAISHTRRDRDHL---RNLIRP-DEDVRLRDATSAY-AVLSLCGPKSRQ 592
Query: 357 ILQRHTDLDLSSLYFMTSRPCT--IAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL 414
IL D+DLS F + I P R YTG+ G EI V + H+ + L+
Sbjct: 593 ILADVADIDLSDAAFPFNSLARFHIGHAPVFAQRLSYTGDLGWEIFVTPDFAEHVFDVLM 652
Query: 415 SD---EDVKLAGLGARDSL 430
+ + ++L G A ++L
Sbjct: 653 ASGAPQGLRLVGGEALNAL 671
>UNIPROTKB|Q48CP0 [details] [associations]
symbol:soxA "Sarcosine oxidase, alpha subunit"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0008115 "sarcosine oxidase activity" evidence=ISS] [GO:0009063
"cellular amino acid catabolic process" evidence=ISS]
InterPro:IPR000103 InterPro:IPR006222 InterPro:IPR006277
InterPro:IPR013027 Pfam:PF01571 PIRSF:PIRSF037980 PRINTS:PR00368
PRINTS:PR00469 GO:GO:0005737 GO:GO:0009063 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG0446 GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 HOGENOM:HOG000218134 KO:K00302 OMA:RECKAVR
ProtClustDB:CLSK869336 PANTHER:PTHR13847:SF41 TIGRFAMs:TIGR01372
RefSeq:YP_276853.1 ProteinModelPortal:Q48CP0 STRING:Q48CP0
GeneID:3558593 KEGG:psp:PSPPH_4753 PATRIC:19979003 Uniprot:Q48CP0
Length = 1006
Score = 154 (59.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 237 RSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIV 296
R V + D S + + + G E+L I +LD GK L E G + DD V
Sbjct: 662 RDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDG-V 720
Query: 297 TKTLEDSLFLVSNAS--RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPL 353
T L D+ FL++ + +V L + Q + D+ + F S + + + GP
Sbjct: 721 TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWP----DLKVYFTSVTDHWATLTLSGPN 776
Query: 354 SSTILQRHTDLDLS--SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVE 411
S +L TD+DL + FMT + +AG+P + R +TGE E+++ + ++E
Sbjct: 777 SRKLLSEVTDIDLGREAFPFMTWKEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLE 836
Query: 412 AL 413
+
Sbjct: 837 KI 838
>UNIPROTKB|E1BB28 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 CTD:1757 KO:K00314
OMA:PHHDVIK EMBL:DAAA02032349 EMBL:DAAA02032350 IPI:IPI00707303
RefSeq:NP_001179970.1 UniGene:Bt.45831 ProteinModelPortal:E1BB28
Ensembl:ENSBTAT00000005925 GeneID:614603 KEGG:bta:614603
NextBio:20899187 Uniprot:E1BB28
Length = 919
Score = 153 (58.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 65/234 (27%), Positives = 99/234 (42%)
Query: 218 FSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGK 277
FS P + + L R +VFD+S+ + + G + + + ADV PG
Sbjct: 549 FSFPPHHDVIKKEC--LACRGAAAVFDMSYFGKFFLVGPDARKAADWLFSADVSR-PPGS 605
Query: 278 GTLSLFTNEQGGIQDDLIVTK------------TLE-DSLFL-VSNASRRKVDMDLMVAA 323
+ N +GG + DL V++ E D +L V A+ + +
Sbjct: 606 TVYTCMLNHRGGTESDLTVSRLAPGPQASPLAPAFEGDGYYLAVGGAAAQHNWSHIRTVL 665
Query: 324 QDRFKSLGKDIHLQFL-SAEERGLIAVQGPLSSTILQRHTDLDLS--SLYFMTSRPCTIA 380
QDR Q + S+E+ GLI+VQGP S +LQ + DLS + F T + A
Sbjct: 666 QDR------KFRCQLIDSSEDLGLISVQGPASRAVLQELLEADLSDDAFPFSTHKLVRAA 719
Query: 381 GIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
G R + GE G E+ P C + +AL++ + AG A DSLS
Sbjct: 720 GHLVRAVRLSFVGELGWELHAPRPSCLPVYQALMTAGAKHGLVNAGYRAIDSLS 773
>UNIPROTKB|E2R5G7 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 CTD:1757 KO:K00314
OMA:PHHDVIK EMBL:AAEX03006776 RefSeq:XP_548398.2
Ensembl:ENSCAFT00000031482 GeneID:491277 KEGG:cfa:491277
Uniprot:E2R5G7
Length = 914
Score = 151 (58.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 64/216 (29%), Positives = 99/216 (45%)
Query: 234 LHTRSKVSVFDVSHMLQTVVTG---KHREEWLESICVADVHELDPGKGTLSLFTNEQGGI 290
L R +VF++S+ + + G + +WL S ADV PG + N +GG
Sbjct: 558 LACRGAAAVFNMSYFGKFYLVGLDARKAADWLFS---ADVSR-PPGSTVYTCMLNHRGGT 613
Query: 291 QDDLIVTKTLEDSLFLVSNASRRKVD-MDLMVA---AQDRFKSLG-----KDIHLQFLS- 340
+ DL V++ L+ S + A + D L V AQ + + + Q +
Sbjct: 614 ESDLTVSR-LDPSPQASALAPAFEGDGYYLAVGGAVAQHNWSHISTVLQDQKFRCQLIDG 672
Query: 341 AEERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVE 398
+E+ G+I++QGP S TILQ D DLS+ F T + AG R + GE G E
Sbjct: 673 SEDLGMISIQGPASRTILQEVLDADLSNEAFPFSTHKLVRAAGHLVRAMRLSFVGELGWE 732
Query: 399 ISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
+ VP C + +A+++ + AG A DSLS
Sbjct: 733 LHVPRSACVPVYQAVMTAGTKHGLVNAGYRAIDSLS 768
>FB|FBgn0034276 [details] [associations]
symbol:CG6385 species:7227 "Drosophila melanogaster"
[GO:0008480 "sarcosine dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 FlyBase:FBgn0034276
EMBL:BT001625 ProteinModelPortal:Q8IGS5 STRING:Q8IGS5 PRIDE:Q8IGS5
InParanoid:Q8IGS5 Bgee:Q8IGS5 Uniprot:Q8IGS5
Length = 907
Score = 159 (61.0 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 57/222 (25%), Positives = 107/222 (48%)
Query: 229 ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQG 288
I + L R+ VF++S+ + ++ G +E + + A+ + DP K + N+ G
Sbjct: 540 IGSEALACRNNAVVFNMSYFAKLLLDGPQAQEAADWLFSANTNR-DPSKTVYTCALNDAG 598
Query: 289 GIQDDLIVTKTLEDS------------LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHL 336
G++ D+ +++ S ++V+ + +++A + R K G + L
Sbjct: 599 GVEADVTISRLAPGSGEVYNPKINGQGFYIVAGGASAFYTYSVLLA-EIRRK--GFNASL 655
Query: 337 QFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFM--TSRPCTIAGIPCTLTRAGYTGE 394
+ L+AE G+I++QGP S ILQ D DLS + ++R + L R + GE
Sbjct: 656 KDLTAE-LGVISIQGPNSRKILQPLIDCDLSDEHVAPNSTRLAKFGDVGLRLLRVSFVGE 714
Query: 395 DGVEISVPGEQCTHIVEALL---SDEDVKLAGLGARDSLSGD 433
G E+ VP + C + +L+ + ED++ AG + SLS +
Sbjct: 715 LGYELHVPKKDCAAVYRSLMKAGAGEDLRNAGYRSLYSLSSE 756
Score = 38 (18.4 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 12 GKRRRETGGF-PGAS 25
G RRE GF PGA+
Sbjct: 36 GGARREPSGFLPGAA 50
>UNIPROTKB|Q4K4P9 [details] [associations]
symbol:soxA "Sarcosine oxidase, alpha subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0008115 "sarcosine
oxidase activity" evidence=ISS] [GO:0009063 "cellular amino acid
catabolic process" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
Pfam:PF01571 PIRSF:PIRSF037980 PRINTS:PR00368 PRINTS:PR00469
GO:GO:0005737 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009063
eggNOG:COG0446 GO:GO:0046653 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GO:GO:0008115 HOGENOM:HOG000218134
KO:K00302 OMA:RECKAVR ProtClustDB:CLSK869336 PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 RefSeq:YP_262784.1 ProteinModelPortal:Q4K4P9
STRING:Q4K4P9 GeneID:3480098 KEGG:pfl:PFL_5726 PATRIC:19880953
BioCyc:PFLU220664:GIX8-5766-MONOMER Uniprot:Q4K4P9
Length = 1005
Score = 150 (57.9 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 237 RSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIV 296
R V + D S + + + G E+L I +LD GK L E G + DD V
Sbjct: 662 RDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDG-V 720
Query: 297 TKTLEDSLFLVSNAS--RRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEER-GLIAVQGPL 353
T L D+ FL++ + +V L + Q + D+ + F S + + + GP
Sbjct: 721 TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWP----DLKVYFTSVTDHWATMTLSGPN 776
Query: 354 SSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVE 411
S +L TD+DL FMT + + G+P + R +TGE E++V + ++E
Sbjct: 777 SRKLLSEVTDIDLDKDGFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLE 836
Query: 412 ALL 414
++
Sbjct: 837 QIV 839
>TIGR_CMR|SPO_1579 [details] [associations]
symbol:SPO_1579 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
HOGENOM:HOG000239381 RefSeq:YP_166820.1 ProteinModelPortal:Q5LT35
GeneID:3192995 KEGG:sil:SPO1579 PATRIC:23376481 OMA:MGTAWTY
ProtClustDB:CLSK864705 Uniprot:Q5LT35
Length = 381
Score = 144 (55.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 49/214 (22%), Positives = 93/214 (43%)
Query: 205 HLSHGGKMVPFAGFSMPVQYGAVS--ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWL 262
H GG++ + G Y A + R+K + DVS + + ++G H +
Sbjct: 14 HAEIGGELEDWNGMGTAWFYDHTDERAKADYEAVRTKAGLMDVSGLKKIHLSGPHAAAVI 73
Query: 263 ESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVA 322
+ +V +L PG+ + +++G DD ++ + ++ LV L +A
Sbjct: 74 DRATTRNVDKLMPGRAVYACMLDDRGLFIDDCVIYRLSVNNWMLVHGTGTGHES--LAMA 131
Query: 323 AQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSLYFMTSRPCTIAGI 382
A GK++ + F ++ +++QGP++ L +H + L + + G
Sbjct: 132 AY------GKNVSMIF--DDDLHDMSLQGPVAVDFLAKHVP-GIRDLAYFGIIQTKLFGK 182
Query: 383 PCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD 416
P ++R GYTGE G EI G + +A+L D
Sbjct: 183 PVMISRTGYTGERGYEIFCEGRHAIALWDAILED 216
>UNIPROTKB|B4DPI2 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0050660
GO:GO:0005759 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:AL365494 EMBL:AL590710
UniGene:Hs.198003 HGNC:HGNC:10536 HOVERGEN:HBG002326 EMBL:AK298348
EMBL:AK316494 IPI:IPI01011174 SMR:B4DPI2 STRING:B4DPI2
Ensembl:ENST00000422262 Uniprot:B4DPI2
Length = 750
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 64/231 (27%), Positives = 100/231 (43%)
Query: 218 FSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG---KHREEWLESICVADVHELD 274
F+ P + +I L R +VFD+S+ + + G + +WL S ADV
Sbjct: 380 FAFPPHHD--TIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFS---ADVSR-P 433
Query: 275 PGKGTLSLFTNEQGGIQDDLIVTKTLEDS----LFLVSNASRRKVDMDLMVAAQD--RFK 328
PG + N +GG + DL V++ L + M VA +
Sbjct: 434 PGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSHIT 493
Query: 329 SLGKD--IHLQFL-SAEERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIP 383
++ +D Q + S+E+ G+I++QGP S ILQ D DLS+ F T + AG
Sbjct: 494 TVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAAGHL 553
Query: 384 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
R + GE G E+ +P C + A+++ + AG A DSLS
Sbjct: 554 VRAMRLSFVGELGWELHIPKASCVPVYRAVMAAGAKHGLINAGYRAIDSLS 604
>UNIPROTKB|F1S0R9 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 CTD:1757 KO:K00314
OMA:PHHDVIK EMBL:CU572088 RefSeq:NP_001240851.1 UniGene:Ssc.32260
Ensembl:ENSSSCT00000006311 GeneID:100154338 KEGG:ssc:100154338
Uniprot:F1S0R9
Length = 918
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 63/218 (28%), Positives = 91/218 (41%)
Query: 234 LHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDD 293
L R +VFD+S+ + + G + + + ADV PG + N +GG + D
Sbjct: 562 LACRGAAAVFDMSYFGKFYLVGPDARKAADWLFSADVSR-PPGSTVYTCMLNHRGGTESD 620
Query: 294 LIV------------TKTLE-DSLFL-VSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFL 339
L V T E D +L V A + L QDR Q +
Sbjct: 621 LTVSRLAPSPQASPLTPAFEGDGYYLAVGGAVAQHNWCHLTTVLQDR------QFRCQLV 674
Query: 340 S-AEERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDG 396
+E+ GLI++QGP S ILQ D DLS+ F T + AG R + GE G
Sbjct: 675 DRSEDLGLISIQGPASRAILQEVLDADLSNEAFPFSTHKLVRAAGHLVRAIRLSFVGELG 734
Query: 397 VEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
E+ +P C + A+++ + AG A DSLS
Sbjct: 735 WELHIPRPSCLPVYRAVMTAGAKHGLVNAGYRAVDSLS 772
>TIGR_CMR|SPO_3396 [details] [associations]
symbol:SPO_3396 "FAD dependent oxidoreductase/aminomethyl
transferase" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=ISS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716 OMA:DWFDIVG
KO:K00314 ProtClustDB:CLSK863205 RefSeq:YP_168592.1
ProteinModelPortal:Q5LN16 GeneID:3195707 KEGG:sil:SPO3396
PATRIC:23380247 Uniprot:Q5LN16
Length = 816
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 53/206 (25%), Positives = 92/206 (44%)
Query: 228 SITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQ 287
++ H R+ + ++D+S + V G +L I ++ G+ + F N
Sbjct: 474 NVAEEHKAIRTGLGMYDMSSFGKIRVEGPDATAYLNHIAGGQF-DVPVGRIVYTQFLNVN 532
Query: 288 GGIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLI 347
GGI+ D+ VT+ E + +V+ A+ R D M+ F+ + D+ +A E G++
Sbjct: 533 GGIEADVTVTRLSETAYLVVTPAATRYADQTRMMRLVGDFRVVITDV-----TAGE-GVL 586
Query: 348 AVQGPLSSTILQRHTDLDLSSLY--FMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQ 405
AV GP + ++ R + D S+ F T++ + + R Y GE G EI V +
Sbjct: 587 AVMGPKARELMARVSPNDFSNDVNPFGTAQEIELGMGLARVHRVTYVGELGWEIYVSSDM 646
Query: 406 CTHIVEALLS---DEDVKLAGLGARD 428
H E L D +KL G+ D
Sbjct: 647 AGHAFETLFEAGQDLGMKLCGMHVMD 672
>TIGR_CMR|SPO_0635 [details] [associations]
symbol:SPO_0635 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_165890.1 ProteinModelPortal:Q5LVR5
GeneID:3195325 KEGG:sil:SPO0635 PATRIC:23374535 OMA:DEYMLYA
Uniprot:Q5LVR5
Length = 835
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/240 (25%), Positives = 112/240 (46%)
Query: 237 RSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIV 296
R+ V + D + + VV G ++L+ + ++ G+ L+ G + + +
Sbjct: 497 RNGVGLIDATAFTKHVVKGPGATQFLDWFTCNKLPKV--GRINLTYALTSAGTTRTEYTI 554
Query: 297 TKTLEDSLFLVSNASRRKVDMD-LMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSS 355
+ E++ ++VS + + D D L AA+D+ + G I +Q ++ + G+ A+ GP S
Sbjct: 555 VRNGENNYYIVSAGAWTEYDADFLRKAAEDKMEEFGY-IEIQDVTTQW-GVFAIAGPKSR 612
Query: 356 TILQRHT-DLD----LSSLYF--MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTH 408
+L+ D D LS+ F +++R + P R YTGE G E+ P E +
Sbjct: 613 DVLKEVIKDADPETALSNKRFPWLSARQIELGMCPVNAIRVAYTGELGWELHHPIEMQRY 672
Query: 409 IVEALLSDED---VKLAGLGARDSLSGDIT---LNTPVPHGSLKLSND--RFKSLGKDIH 460
+ + LL+ + +KL G A++ L + + T + + L D RF LGKD H
Sbjct: 673 LWDLLLAAGEKHGMKLVGARAQNWLRQEKSYRAFGTELGRDATPLEADLPRFVDLGKDFH 732
>UNIPROTKB|Q9UL12 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0008480 "sarcosine dehydrogenase activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISS] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005739 GO:GO:0050660 GO:GO:0005759 EMBL:CH471090
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 EMBL:AL365494 HOGENOM:HOG000251716 EMBL:AF095735
EMBL:AF162428 EMBL:AF140745 EMBL:AF140726 EMBL:AF140727
EMBL:AF140728 EMBL:AF140729 EMBL:AF140730 EMBL:AF140731
EMBL:AF140732 EMBL:AF140733 EMBL:AF140734 EMBL:AF140735
EMBL:AF140736 EMBL:AF140737 EMBL:AF140738 EMBL:AF140739
EMBL:AF140740 EMBL:AF140741 EMBL:AF140742 EMBL:AF140743
EMBL:AF140744 EMBL:AL590710 EMBL:BC136363 EMBL:BC136364
EMBL:BC144035 EMBL:AF129265 IPI:IPI00034308 RefSeq:NP_001128179.1
RefSeq:NP_009032.2 UniGene:Hs.198003 ProteinModelPortal:Q9UL12
SMR:Q9UL12 STRING:Q9UL12 PhosphoSite:Q9UL12 DMDM:52000845
PaxDb:Q9UL12 PRIDE:Q9UL12 Ensembl:ENST00000371872
Ensembl:ENST00000439388 GeneID:1757 KEGG:hsa:1757 UCSC:uc004ceo.3
CTD:1757 GeneCards:GC09M136528 H-InvDB:HIX0079029 HGNC:HGNC:10536
MIM:268900 MIM:604455 neXtProt:NX_Q9UL12 Orphanet:3129
PharmGKB:PA34944 HOVERGEN:HBG002326 InParanoid:Q9UL12 KO:K00314
OMA:PHHDVIK OrthoDB:EOG4XKV66 PhylomeDB:Q9UL12 GenomeRNAi:1757
NextBio:7153 ArrayExpress:Q9UL12 Bgee:Q9UL12 CleanEx:HS_SARDH
Genevestigator:Q9UL12 GermOnline:ENSG00000123453 GO:GO:0008480
Uniprot:Q9UL12
Length = 918
Score = 145 (56.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 64/231 (27%), Positives = 100/231 (43%)
Query: 218 FSMPVQYGAVSITASHLHTRSKVSVFDVSHMLQTVVTG---KHREEWLESICVADVHELD 274
F+ P + +I L R +VFD+S+ + + G + +WL S ADV
Sbjct: 548 FAFPPHHD--TIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFS---ADVSR-P 601
Query: 275 PGKGTLSLFTNEQGGIQDDLIVTKTLEDS----LFLVSNASRRKVDMDLMVAAQD--RFK 328
PG + N +GG + DL V++ L + M VA +
Sbjct: 602 PGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSHIT 661
Query: 329 SLGKD--IHLQFL-SAEERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIP 383
++ +D Q + S+E+ G+I++QGP S ILQ D DLS+ F T + AG
Sbjct: 662 TVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAAGHL 721
Query: 384 CTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
R + GE G E+ +P C + A+++ + AG A DSLS
Sbjct: 722 VRAMRLSFVGELGWELHIPKASCVPVYRAVMAAGAKHGLINAGYRAIDSLS 772
>ZFIN|ZDB-GENE-080227-8 [details] [associations]
symbol:dmgdh "dimethylglycine dehydrogenase"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 ZFIN:ZDB-GENE-080227-8
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 EMBL:BC155630 IPI:IPI00511660
UniGene:Dr.5571 ProteinModelPortal:A9JRE6 STRING:A9JRE6
Uniprot:A9JRE6
Length = 875
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 54/196 (27%), Positives = 93/196 (47%)
Query: 240 VSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKT 299
V V D+S + VTG E L+ + + ++ G+ +S +G + +L VT T
Sbjct: 540 VGVIDLSPFGKMKVTGADSERLLDRLLANTLPKV--GQTNISHMLTPRGRVYAELTVTHT 597
Query: 300 LEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQ 359
+ FL+ S ++ DL ++ G D+ + ++ +E G++ + GP + TILQ
Sbjct: 598 -QPGEFLLITGSGSELH-DLRWIEREAADG-GYDVCVTNVT-DEIGVLGIAGPKARTILQ 653
Query: 360 RHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS-- 415
+ T DLS F+ R +AG R YTGE G E+ + + + +AL+
Sbjct: 654 KLTSADLSESGFRFLQCRTIELAGATVQAIRISYTGELGWELYMDMRNMSAVYQALMEAG 713
Query: 416 -DEDVKLAGLGARDSL 430
DE++ G A +SL
Sbjct: 714 RDENIDDFGTYAMNSL 729
>TIGR_CMR|SPO_1592 [details] [associations]
symbol:SPO_1592 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_166833.1 ProteinModelPortal:Q5LT22
GeneID:3193241 KEGG:sil:SPO1592 PATRIC:23376507 OMA:AVWIDEC
Uniprot:Q5LT22
Length = 818
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 50/179 (27%), Positives = 83/179 (46%)
Query: 237 RSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIV 296
RS + D+S + V+G L+ + + + PG L+ N +G I+ + V
Sbjct: 484 RSAAGIMDISAFTKVEVSGPDAGALLDRLTANRLPQ-KPGGIALTHMLNRRGRIELETTV 542
Query: 297 TKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSST 356
K ED +LV A + +D + A + DI ++ LS + L A+ GP +
Sbjct: 543 VKLDEDRFYLVCAAFFEQRLLDHLAAHRGT-----ADITVRNLSTDWAAL-ALNGPHARD 596
Query: 357 ILQRHTDLDLSSLYF--MTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEAL 413
IL T+ DLS+ F +T++ T+AG R Y GE G E+ +P + + +AL
Sbjct: 597 ILAACTEADLSNARFKWLTAQQITVAGHSLWALRMSYAGELGWELHIPRDHALAVYDAL 655
>TIGR_CMR|SPO_0207 [details] [associations]
symbol:SPO_0207 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_165477.1
ProteinModelPortal:Q5LWZ7 GeneID:3195798 KEGG:sil:SPO0207
PATRIC:23373663 OMA:WHAAANI Uniprot:Q5LWZ7
Length = 805
Score = 149 (57.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 49/194 (25%), Positives = 83/194 (42%)
Query: 237 RSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIV 296
R +V V D+S+ + G +WL+ + V ++ G+ L+ +GGI D +
Sbjct: 475 REQVGVIDISNFANYEIKGPGAHDWLDRLVANRVPTVE-GRSCLTPLIGVRGGIAGDFTI 533
Query: 297 TKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSST 356
T T ED+ +V + + L + + + G V GP +
Sbjct: 534 TMTGEDAYMMVGSGMAERYHQRFF-----NMVDLPEGTTCEVATNRIAGY-NVAGPRARE 587
Query: 357 ILQRHTDLDLSSLYFMTSRPCTI--AGIPCTLTRAGYTGEDGVEIS-VPGEQCTHIVEAL 413
+LQR T+ DLS+ F R TI AG+ C R +TG+ G E+ G+Q +
Sbjct: 588 MLQRLTNADLSNAGFPFMRSATIEVAGVACLAIRVSFTGDLGCELHCAEGDQVRLYTALI 647
Query: 414 LSDEDVKLAGLGAR 427
+ +V +G+R
Sbjct: 648 AAAREVGGGPVGSR 661
Score = 38 (18.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 71 PSPSLKKNIAMGYIEPAYSKVG 92
P P L+ G I P +S+ G
Sbjct: 334 PVPELRNYFVCGGIIPGFSQSG 355
>MGI|MGI:2183102 [details] [associations]
symbol:Sardh "sarcosine dehydrogenase" species:10090 "Mus
musculus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005759 "mitochondrial matrix"
evidence=ISO] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008480
"sarcosine dehydrogenase activity" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=IEA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
MGI:MGI:2183102 GO:GO:0005739 GO:GO:0050660 GO:GO:0005759
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 HOGENOM:HOG000251716 GeneTree:ENSGT00530000063120
CTD:1757 HOVERGEN:HBG002326 KO:K00314 OMA:PHHDVIK OrthoDB:EOG4XKV66
GO:GO:0008480 EMBL:BC003456 IPI:IPI00136213 RefSeq:NP_619606.1
UniGene:Mm.278467 ProteinModelPortal:Q99LB7 SMR:Q99LB7
STRING:Q99LB7 PhosphoSite:Q99LB7 PaxDb:Q99LB7 PRIDE:Q99LB7
Ensembl:ENSMUST00000102886 GeneID:192166 KEGG:mmu:192166
InParanoid:Q99LB7 NextBio:371164 Bgee:Q99LB7 CleanEx:MM_SARDH
Genevestigator:Q99LB7 GermOnline:ENSMUSG00000009614 Uniprot:Q99LB7
Length = 919
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 60/215 (27%), Positives = 97/215 (45%)
Query: 234 LHTRSKVSVFDVSHMLQTVVTG---KHREEWLESICVADVHELDPGKGTLSLFTNEQGGI 290
L R +VF++S+ + + G + +WL S ADV+ PG + N++GG
Sbjct: 563 LACRGAAAVFNMSYFGKFYLLGVDARKAADWLFS---ADVNR-PPGSTVYTCMLNQRGGT 618
Query: 291 QDDLIVTK----TLEDSLFLVSNASRRKVDMDLMVAAQD--RFKSLGKD--IHLQFL-SA 341
+ DL V++ T L + + VA + ++ +D Q + S+
Sbjct: 619 ESDLTVSRLAPGTQASPLVPAFEGDCYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMDSS 678
Query: 342 EERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 399
E+ G++++QGP S ILQ D DLS+ F T + AG R + GE G E+
Sbjct: 679 EDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVGELGWEL 738
Query: 400 SVPGEQCTHIVEALLSD---EDVKLAGLGARDSLS 431
VP C + A+++ + AG A DSLS
Sbjct: 739 HVPRASCLPVYRAVMAAGARHGLVNAGYRAIDSLS 773
>MGI|MGI:1921379 [details] [associations]
symbol:Dmgdh "dimethylglycine dehydrogenase precursor"
species:10090 "Mus musculus" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005542 "folic acid binding"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006544 "glycine metabolic
process" evidence=ISO] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0047865 "dimethylglycine dehydrogenase activity" evidence=ISO]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
UniPathway:UPA00291 MGI:MGI:1921379 GO:GO:0005739 GO:GO:0050660
EMBL:AC131739 GO:GO:0006579 EMBL:CT030023 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005542
eggNOG:COG0665 CTD:29958 HOGENOM:HOG000251716 HOVERGEN:HBG081945
KO:K00315 OMA:REVGKMI OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:AK004755
EMBL:BC024126 IPI:IPI00120123 RefSeq:NP_083048.1 UniGene:Mm.21789
ProteinModelPortal:Q9DBT9 SMR:Q9DBT9 STRING:Q9DBT9
PhosphoSite:Q9DBT9 PaxDb:Q9DBT9 PRIDE:Q9DBT9
Ensembl:ENSMUST00000048001 GeneID:74129 KEGG:mmu:74129
UCSC:uc007rll.1 GeneTree:ENSGT00530000063120 InParanoid:B1B1D0
NextBio:339854 Bgee:Q9DBT9 CleanEx:MM_DMGDH Genevestigator:Q9DBT9
GermOnline:ENSMUSG00000042102 Uniprot:Q9DBT9
Length = 869
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 58/245 (23%), Positives = 113/245 (46%)
Query: 229 ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQG 288
+ + + +V V D+S + + G+ + L+ + + ++ G +S +G
Sbjct: 511 VGSEYKQVMQRVGVIDLSPFGKFNIKGRDSTQLLDHLFANVIPKV--GFTNISHMLTPRG 568
Query: 289 GIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIA 348
+ +L V++ L++ + D+ + A F+ G D+ +Q ++ +E G++
Sbjct: 569 RVYAELTVSQQSPGEFLLITGSGSELHDLRWIEEAA--FRG-GYDVEIQNIT-DEFGVLG 624
Query: 349 VQGPLSSTILQRHTDLDLS--SLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 406
V GP + +LQ+ T DLS + F+ ++ I+ IP T R YTGE G E+ E
Sbjct: 625 VAGPYARRVLQKLTSEDLSDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDS 684
Query: 407 THIVEALLSDEDVKLAGLGARDSLSGDITLNTPVPHGSLKLSNDRFKSLGKDIHLQFLSP 466
+ E ++S + G+G D G LN +L+L F++ G +++ +P
Sbjct: 685 ATLYERIMSAGQEE--GIG--DF--GTYALN------ALRLEK-AFRAWGSEMNCD-TNP 730
Query: 467 EERGL 471
E GL
Sbjct: 731 LEAGL 735
>TIGR_CMR|SPO_2345 [details] [associations]
symbol:SPO_2345 "sarcosine oxidase, alpha subunit family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016647
"oxidoreductase activity, acting on the CH-NH group of donors,
oxygen as acceptor" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
Pfam:PF01571 PIRSF:PIRSF037980 PRINTS:PR00368 PRINTS:PR00469
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 HOGENOM:HOG000218134 KO:K00302 PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 RefSeq:YP_167568.1 ProteinModelPortal:Q5LQY7
GeneID:3193813 KEGG:sil:SPO2345 PATRIC:23378057 OMA:RYGLALW
ProtClustDB:CLSK836134 Uniprot:Q5LQY7
Length = 1010
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 55/232 (23%), Positives = 101/232 (43%)
Query: 197 QRTPLYDLHLSHGGKMVPFAGFSMPVQY---G-AV--SITASHLHTRSKVSVFDVSHMLQ 250
++TP+YD ++G P + P Y G +V ++ +TR + + D S + +
Sbjct: 617 RKTPIYDWSNANGADWEPVGQWRRPFAYVRPGESVHDAVNREVKNTRENLGLLDASTLGK 676
Query: 251 TVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFL-VSN 309
+V G ++L+ + + L PGK L +E G + DD +V + ED+ +
Sbjct: 677 LIVKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDEDTFLCHTTT 736
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHT------- 362
++ + Q + +++ ++ E+ IAV GP + +L++
Sbjct: 737 GGAERIHGHMEEWLQTEWWDW--KVYVANVT-EQYAQIAVVGPKARKVLEKLNAKAGGGM 793
Query: 363 DLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALL 414
DL + +L FM R I R ++GE EI+VP Q EAL+
Sbjct: 794 DLSVEALPFMEWRDGRIGEFDARAYRISFSGELSYEIAVPASQGLAFWEALV 845
>RGD|620453 [details] [associations]
symbol:Dmgdh "dimethylglycine dehydrogenase" species:10116
"Rattus norvegicus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005542 "folic acid binding" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO;IDA;TAS] [GO:0006544
"glycine metabolic process" evidence=ISO] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0006579 "amino-acid betaine
catabolic process" evidence=IEA] [GO:0019695 "choline metabolic
process" evidence=TAS] [GO:0042426 "choline catabolic process"
evidence=TAS] [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA;ISO;IDA;TAS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA;TAS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291 RGD:620453
GO:GO:0005739 GO:GO:0050660 GO:GO:0042426 GO:GO:0006579
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0005542 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:X55995
IPI:IPI00207941 PIR:S16133 UniGene:Rn.3646
ProteinModelPortal:Q63342 STRING:Q63342 PhosphoSite:Q63342
PRIDE:Q63342 UCSC:RGD:620453 InParanoid:Q63342
BioCyc:MetaCyc:MONOMER-16117 BRENDA:1.5.99.2 ArrayExpress:Q63342
Genevestigator:Q63342 GermOnline:ENSRNOG00000023588 Uniprot:Q63342
Length = 857
Score = 135 (52.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 43/189 (22%), Positives = 87/189 (46%)
Query: 229 ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQG 288
+ + + +V V D+S + + G+ + L+ +C + ++ G +S +G
Sbjct: 511 VGSEYKQVMQRVGVIDLSPFGKFNIKGQDSTQLLDHLCANVIPKV--GFTNISHMLTPRG 568
Query: 289 GIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIA 348
+ +L V+ L++ + D+ + A R G D+ ++ ++ +E G++
Sbjct: 569 RVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEAAVRG---GYDVEIRNIT-DELGVLG 624
Query: 349 VQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 406
V GP + +LQ+ T DLS F+ ++ I+ IP T R YTGE G E+ E
Sbjct: 625 VAGPYARRVLQKLTSEDLSDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDS 684
Query: 407 THIVEALLS 415
+ E +++
Sbjct: 685 AALYERIMN 693
>UNIPROTKB|Q63342 [details] [associations]
symbol:Dmgdh "Dimethylglycine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291
RGD:620453 GO:GO:0005739 GO:GO:0050660 GO:GO:0042426 GO:GO:0006579
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0005542 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:X55995
IPI:IPI00207941 PIR:S16133 UniGene:Rn.3646
ProteinModelPortal:Q63342 STRING:Q63342 PhosphoSite:Q63342
PRIDE:Q63342 UCSC:RGD:620453 InParanoid:Q63342
BioCyc:MetaCyc:MONOMER-16117 BRENDA:1.5.99.2 ArrayExpress:Q63342
Genevestigator:Q63342 GermOnline:ENSRNOG00000023588 Uniprot:Q63342
Length = 857
Score = 135 (52.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 43/189 (22%), Positives = 87/189 (46%)
Query: 229 ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQG 288
+ + + +V V D+S + + G+ + L+ +C + ++ G +S +G
Sbjct: 511 VGSEYKQVMQRVGVIDLSPFGKFNIKGQDSTQLLDHLCANVIPKV--GFTNISHMLTPRG 568
Query: 289 GIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIA 348
+ +L V+ L++ + D+ + A R G D+ ++ ++ +E G++
Sbjct: 569 RVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEAAVRG---GYDVEIRNIT-DELGVLG 624
Query: 349 VQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 406
V GP + +LQ+ T DLS F+ ++ I+ IP T R YTGE G E+ E
Sbjct: 625 VAGPYARRVLQKLTSEDLSDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDS 684
Query: 407 THIVEALLS 415
+ E +++
Sbjct: 685 AALYERIMN 693
>RGD|621125 [details] [associations]
symbol:Sardh "sarcosine dehydrogenase" species:10116 "Rattus
norvegicus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;ISS] [GO:0005759 "mitochondrial
matrix" evidence=IDA] [GO:0006545 "glycine biosynthetic process"
evidence=TAS] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0008480 "sarcosine dehydrogenase activity" evidence=TAS]
[GO:0016491 "oxidoreductase activity" evidence=IEA;NAS] [GO:0042426
"choline catabolic process" evidence=NAS;TAS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IDA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
EMBL:AF067650 RGD:621125 GO:GO:0050660 GO:GO:0005759 GO:GO:0042426
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 GO:GO:0006545 HOGENOM:HOG000251716 CTD:1757
HOVERGEN:HBG002326 KO:K00314 OrthoDB:EOG4XKV66 GO:GO:0008480
EMBL:U62481 EMBL:L79910 IPI:IPI00209807 RefSeq:NP_446116.1
UniGene:Rn.89832 ProteinModelPortal:Q64380 STRING:Q64380
PRIDE:Q64380 GeneID:114123 KEGG:rno:114123 UCSC:RGD:621125
InParanoid:Q64380 BioCyc:MetaCyc:MONOMER-16116 NextBio:618353
ArrayExpress:Q64380 Genevestigator:Q64380
GermOnline:ENSRNOG00000006916 Uniprot:Q64380
Length = 919
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 61/216 (28%), Positives = 97/216 (44%)
Query: 234 LHTRSKVSVFDVSHMLQTVVTG---KHREEWLESICVADVHELDPGKGTLSLFTNEQGGI 290
L R+ +VF++S+ + + G + +WL S ADV+ PG + N++GG
Sbjct: 563 LACRTAAAVFNMSYFGKFYLLGADARKAPDWLFS---ADVNR-PPGSTVYTCMLNQRGGT 618
Query: 291 QDDLIVTKTLEDSLFLVSNASRRKVD-MDLMVA---AQDRFKSLG-----KDIHLQFLS- 340
+ DL V+ L A + D L V AQ + + ++ Q +
Sbjct: 619 ESDLTVS-CLAPGAQASPLAPAFEGDGYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMDC 677
Query: 341 AEERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVE 398
+E+ G++++QGP S ILQ D DLS+ F T + AG R + GE G E
Sbjct: 678 SEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVGELGWE 737
Query: 399 ISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
+ VP C + A+++ + AG A DSLS
Sbjct: 738 LHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLS 773
>UNIPROTKB|Q64380 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
EMBL:AF067650 RGD:621125 GO:GO:0050660 GO:GO:0005759 GO:GO:0042426
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 GO:GO:0006545 HOGENOM:HOG000251716 CTD:1757
HOVERGEN:HBG002326 KO:K00314 OrthoDB:EOG4XKV66 GO:GO:0008480
EMBL:U62481 EMBL:L79910 IPI:IPI00209807 RefSeq:NP_446116.1
UniGene:Rn.89832 ProteinModelPortal:Q64380 STRING:Q64380
PRIDE:Q64380 GeneID:114123 KEGG:rno:114123 UCSC:RGD:621125
InParanoid:Q64380 BioCyc:MetaCyc:MONOMER-16116 NextBio:618353
ArrayExpress:Q64380 Genevestigator:Q64380
GermOnline:ENSRNOG00000006916 Uniprot:Q64380
Length = 919
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 61/216 (28%), Positives = 97/216 (44%)
Query: 234 LHTRSKVSVFDVSHMLQTVVTG---KHREEWLESICVADVHELDPGKGTLSLFTNEQGGI 290
L R+ +VF++S+ + + G + +WL S ADV+ PG + N++GG
Sbjct: 563 LACRTAAAVFNMSYFGKFYLLGADARKAPDWLFS---ADVNR-PPGSTVYTCMLNQRGGT 618
Query: 291 QDDLIVTKTLEDSLFLVSNASRRKVD-MDLMVA---AQDRFKSLG-----KDIHLQFLS- 340
+ DL V+ L A + D L V AQ + + ++ Q +
Sbjct: 619 ESDLTVS-CLAPGAQASPLAPAFEGDGYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMDC 677
Query: 341 AEERGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVE 398
+E+ G++++QGP S ILQ D DLS+ F T + AG R + GE G E
Sbjct: 678 SEDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVGELGWE 737
Query: 399 ISVPGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
+ VP C + A+++ + AG A DSLS
Sbjct: 738 LHVPQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLS 773
>UNIPROTKB|D4A9I9 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 IPI:IPI00557713
ProteinModelPortal:D4A9I9 Ensembl:ENSRNOT00000043905
ArrayExpress:D4A9I9 Uniprot:D4A9I9
Length = 920
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 58/213 (27%), Positives = 95/213 (44%)
Query: 234 LHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDD 293
L R+ +VF++S+ + + G + + + ADV+ PG + N++GG + D
Sbjct: 564 LACRTAAAVFNMSYFGKFYLLGADARKAADWLFSADVNR-PPGSTVYTCMLNQRGGTESD 622
Query: 294 LIVTKTLEDSLFLVSNASRRKVD-MDLMVA---AQDRFKSLG-----KDIHLQFLS-AEE 343
L V+ L A + D L V AQ + + ++ Q + +E+
Sbjct: 623 LTVS-CLAPGAQASPLAPAFEGDGYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMDCSED 681
Query: 344 RGLIAVQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISV 401
G++++QGP S ILQ D DLS+ F T + AG R + GE G E+ V
Sbjct: 682 LGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVGELGWELHV 741
Query: 402 PGEQCTHIVEALLS---DEDVKLAGLGARDSLS 431
P C + A+++ + AG A DSLS
Sbjct: 742 PQASCLPVYRAVMAAGAKHGLVNAGYRAIDSLS 774
>TIGR_CMR|SPO_3400 [details] [associations]
symbol:SPO_3400 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_168596.1
ProteinModelPortal:Q5LN12 GeneID:3193141 KEGG:sil:SPO3400
PATRIC:23380255 OMA:DPMPEDF Uniprot:Q5LN12
Length = 815
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 50/194 (25%), Positives = 86/194 (44%)
Query: 237 RSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIV 296
R V D+ + +V G E L + + ++ G+ L + +G I ++
Sbjct: 493 RDHCGVLDLPGFSRFLVKGAGAAEALRGLITGGLPKV--GRMNLVYISESRGRILTEMSC 550
Query: 297 TKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSST 356
+ ED +++ A+ + D D+++ A ++ +D+ R + V GP S
Sbjct: 551 IRLGEDEFVMITAATAQWHDRDILLGAMPAGVTV-EDV------TTTRDTLIVTGPKSRE 603
Query: 357 ILQRHTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLSD 416
IL +D DLS + +T + T+AG P L R + GE G E+ E I +ALL
Sbjct: 604 ILAGLSDADLSQGW-LTHQAATVAGQPAFLIRVSFAGELGWEVHALNEHMPAIYDALLG- 661
Query: 417 EDVKLAGLGARDSL 430
K G+ A +SL
Sbjct: 662 AGAKPFGMWALNSL 675
>UNIPROTKB|Q5SYV2 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 EMBL:AL365494
EMBL:AL590710 HGNC:HGNC:10536 HOVERGEN:HBG002326 IPI:IPI00514525
SMR:Q5SYV2 Ensembl:ENST00000371868 UCSC:uc004cen.3 Uniprot:Q5SYV2
Length = 368
Score = 127 (49.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 54/186 (29%), Positives = 81/186 (43%)
Query: 260 EWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDS----LFLVSNASRRKV 315
+WL S ADV PG + N +GG + DL V++ L +
Sbjct: 19 DWLFS---ADVSR-PPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYL 74
Query: 316 DMDLMVAAQD--RFKSLGKD--IHLQFL-SAEERGLIAVQGPLSSTILQRHTDLDLSS-- 368
M VA + ++ +D Q + S+E+ G+I++QGP S ILQ D DLS+
Sbjct: 75 AMGGAVAQHNWSHITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEA 134
Query: 369 LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVEALLS---DEDVKLAGLG 425
F T + AG R + GE G E+ +P C + A+++ + AG
Sbjct: 135 FPFSTHKLLRAAGHLVRAMRLSFVGELGWELHIPKASCVPVYRAVMAAGAKHGLINAGYR 194
Query: 426 ARDSLS 431
A DSLS
Sbjct: 195 AIDSLS 200
>UNIPROTKB|F1MDJ6 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:DAAA02027819 IPI:IPI00715285 Ensembl:ENSBTAT00000036611
Uniprot:F1MDJ6
Length = 866
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 47/207 (22%), Positives = 94/207 (45%)
Query: 229 ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQG 288
+ + + +V V D+S + + G+ L+ + + ++ G +S +G
Sbjct: 518 VGSEYQQVMQRVGVIDLSPFGKFNIKGQDSIRLLDHLFANVIPKV--GFTNISHMLTPKG 575
Query: 289 GIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIA 348
+ +L V+ LV+ + DL ++ K G D+ ++ ++ +E G++
Sbjct: 576 RVYAELTVSHQSPGEFLLVTGSGSEL--HDLRWIEEEAIKG-GYDVEIKNIT-DELGVLG 631
Query: 349 VQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 406
V GP S +LQ+ T DLS F+ ++ ++ IP T R YTGE G E+ E
Sbjct: 632 VAGPYSRKVLQKLTSEDLSDNVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDS 691
Query: 407 THIVEALLS---DEDVKLAGLGARDSL 430
+ +A+++ +E + G A ++L
Sbjct: 692 AALYDAIMNAGQEEGIDNFGTYAMNAL 718
>UNIPROTKB|B4E1J9 [details] [associations]
symbol:DMGDH "cDNA FLJ50354, highly similar to
Dimethylglycine dehydrogenase, mitochondrial (EC 1.5.99.2)"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737 EMBL:AC020937
EMBL:AC008502 GO:GO:0004047 GO:GO:0006546 EMBL:AC016559
UniGene:Hs.655653 HGNC:HGNC:24475 EMBL:AK303873 IPI:IPI01013014
SMR:B4E1J9 STRING:B4E1J9 Ensembl:ENST00000540686 UCSC:uc011ctg.1
Uniprot:B4E1J9
Length = 394
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 45/207 (21%), Positives = 95/207 (45%)
Query: 229 ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQG 288
+ + + +V+V D+S + + G+ L+ + + ++ G +S +G
Sbjct: 138 VGSEYKQVMQRVAVTDLSPFGKFNIKGQDSIRLLDHLFANVIPKV--GFTNISHMLTPKG 195
Query: 289 GIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIA 348
+ +L V+ L++ + DL ++ K G D+ ++ ++ +E G++
Sbjct: 196 RVYAELTVSHQSPGEFLLITGSGSEL--HDLRWIEEEAVKG-GYDVEIKNIT-DELGVLG 251
Query: 349 VQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 406
V GP + +LQ+ T DLS F+ ++ ++ IP T R YTGE G E+ E
Sbjct: 252 VAGPQARKVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDS 311
Query: 407 THIVEALLS---DEDVKLAGLGARDSL 430
+ +A+++ +E + G A ++L
Sbjct: 312 VALYDAIMNAGQEEGIDNFGTYAMNAL 338
>TIGR_CMR|SPO_1746 [details] [associations]
symbol:SPO_1746 "sarcosine oxidase, alpha subunit family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016647
"oxidoreductase activity, acting on the CH-NH group of donors,
oxygen as acceptor" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
Pfam:PF01571 PRINTS:PR00368 PRINTS:PR00469 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046653 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0008115
HOGENOM:HOG000218134 KO:K00302 PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 RefSeq:YP_166984.1 ProteinModelPortal:Q5LSM1
GeneID:3193191 KEGG:sil:SPO1746 PATRIC:23376815 OMA:YGMEALN
ProtClustDB:CLSK2463880 Uniprot:Q5LSM1
Length = 977
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 235 HTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDL 294
+ R+ V V DVS + + + G L+ + L G+ L E G + DD
Sbjct: 634 YVRNAVGVADVSTLGKIDIQGTDAARLLDFVYTNMFSTLKVGRVRYGLMLREDGHVMDDG 693
Query: 295 IVTKTLEDS-LFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPL 353
+ ED L + A+ +V L AQ D+ + ++ E+ AV GP
Sbjct: 694 TTARLGEDHYLMTTTTAAAGQVMAHLEFVAQGLHPEW--DVSICSVT-EQWAQFAVAGPR 750
Query: 354 SSTILQR--HTDLDLSSLYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQCTHIVE 411
+ +L T +D + FM+ ++ G+ L R ++GE+G EI+VP + +
Sbjct: 751 AREVLNGLLDTPIDAAGWPFMSCGAVSVLGVGGRLFRISFSGEEGYEIAVPARYGASLFD 810
Query: 412 ALLSDEDVKLAGLGA 426
L++ V+ G GA
Sbjct: 811 LLVTR--VEALGGGA 823
>UNIPROTKB|F8W6P8 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 EMBL:AC020937 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 EMBL:AC016559 HGNC:HGNC:24475 IPI:IPI00178676
ProteinModelPortal:F8W6P8 PRIDE:F8W6P8 Ensembl:ENST00000380311
UCSC:uc011ctf.1 ArrayExpress:F8W6P8 Bgee:F8W6P8 Uniprot:F8W6P8
Length = 573
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 45/207 (21%), Positives = 95/207 (45%)
Query: 229 ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQG 288
+ + + +V+V D+S + + G+ L+ + + ++ G +S +G
Sbjct: 317 VGSEYKQVMQRVAVTDLSPFGKFNIKGQDSIRLLDHLFANVIPKV--GFTNISHMLTPKG 374
Query: 289 GIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIA 348
+ +L V+ L++ + DL ++ K G D+ ++ ++ +E G++
Sbjct: 375 RVYAELTVSHQSPGEFLLITGSGSEL--HDLRWIEEEAVKG-GYDVEIKNIT-DELGVLG 430
Query: 349 VQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 406
V GP + +LQ+ T DLS F+ ++ ++ IP T R YTGE G E+ E
Sbjct: 431 VAGPQARKVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDS 490
Query: 407 THIVEALLS---DEDVKLAGLGARDSL 430
+ +A+++ +E + G A ++L
Sbjct: 491 VALYDAIMNAGQEEGIDNFGTYAMNAL 517
>TIGR_CMR|SPO_1648 [details] [associations]
symbol:SPO_1648 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000253737 KO:K00605
PANTHER:PTHR13847:SF5 RefSeq:YP_166889.1 ProteinModelPortal:Q5LSW6
GeneID:3193889 KEGG:sil:SPO1648 PATRIC:23376621 OMA:GKYVPLC
ProtClustDB:CLSK2767249 Uniprot:Q5LSW6
Length = 367
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 53/210 (25%), Positives = 90/210 (42%)
Query: 192 SPSAEQR-TPLYDLHLSHGG-KMVPFAGFSMPVQYGAVSITASHLHTRSKVSVFDVSHML 249
SPS R +P Y+ L+ G M + MP YG + + VS++DV+
Sbjct: 5 SPSTRLRPSPFYEATLADGVCAMTTYNQMLMPTSYGHPE--EEYWRIINGVSMWDVAVER 62
Query: 250 QTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQGGIQDDLIVTKTLEDSLFLVSN 309
Q + G + + D+ + G+G N G + +D I+ K ED +L S
Sbjct: 63 QVQLMGPDAGRLAQILAPRDLSKCKIGQGKYVPLCNHNGVLINDPILLKLDEDRYWL-SI 121
Query: 310 ASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIAVQGPLSSTILQRHTDLDLSSL 369
A D ++ A+ + G + + S + +AVQGP + T++ + L
Sbjct: 122 A-----DSNIWFWAEAIARERGLKVEV---SEPDVSPLAVQGPKAETVVASIFGDWVRDL 173
Query: 370 YFMTSRPCTIAGIPCTLTRAGYTGEDGVEI 399
+ R I GIP + R+G++ + G EI
Sbjct: 174 KYFWFRETEIDGIPVAVARSGWSKQGGFEI 203
>UNIPROTKB|Q8TCC6 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 EMBL:AC020937 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 EMBL:AC016559 UniGene:Hs.655653 HGNC:HGNC:24475
HOGENOM:HOG000251716 EMBL:BC022388 IPI:IPI00985114 SMR:Q8TCC6
STRING:Q8TCC6 Ensembl:ENST00000523732 HOVERGEN:HBG103457
Uniprot:Q8TCC6
Length = 613
Score = 122 (48.0 bits), Expect = 0.00043, P = 0.00043
Identities = 45/207 (21%), Positives = 95/207 (45%)
Query: 229 ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQG 288
+ + + +V+V D+S + + G+ L+ + + ++ G +S +G
Sbjct: 357 VGSEYKQVMQRVAVTDLSPFGKFNIKGQDSIRLLDHLFANVIPKV--GFTNISHMLTPKG 414
Query: 289 GIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIA 348
+ +L V+ L++ + DL ++ K G D+ ++ ++ +E G++
Sbjct: 415 RVYAELTVSHQSPGEFLLITGSGSEL--HDLRWIEEEAVKG-GYDVEIKNIT-DELGVLG 470
Query: 349 VQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 406
V GP + +LQ+ T DLS F+ ++ ++ IP T R YTGE G E+ E
Sbjct: 471 VAGPQARKVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDS 530
Query: 407 THIVEALLS---DEDVKLAGLGARDSL 430
+ +A+++ +E + G A ++L
Sbjct: 531 VALYDAIMNAGQEEGIDNFGTYAMNAL 557
>UNIPROTKB|Q9UI17 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0006579 "amino-acid betaine catabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IMP]
[GO:0019695 "choline metabolic process" evidence=NAS] [GO:0005759
"mitochondrial matrix" evidence=NAS] [GO:0047865 "dimethylglycine
dehydrogenase activity" evidence=IMP] [GO:0009055 "electron carrier
activity" evidence=NAS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291 GO:GO:0009055
GO:GO:0050660 GO:GO:0005759 GO:GO:0019695 EMBL:AC020937
GO:GO:0006544 GO:GO:0006579 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005542
eggNOG:COG0665 EMBL:AF111858 EMBL:AK314736 IPI:IPI00296196
RefSeq:NP_037523.2 UniGene:Hs.655653 ProteinModelPortal:Q9UI17
SMR:Q9UI17 STRING:Q9UI17 PhosphoSite:Q9UI17 DMDM:296434575
PaxDb:Q9UI17 PRIDE:Q9UI17 DNASU:29958 Ensembl:ENST00000255189
GeneID:29958 KEGG:hsa:29958 UCSC:uc003kfs.3 CTD:29958
GeneCards:GC05M078293 H-InvDB:HIX0200737 HGNC:HGNC:24475
HPA:HPA036442 MIM:605849 MIM:605850 neXtProt:NX_Q9UI17
Orphanet:243343 PharmGKB:PA134947212 HOGENOM:HOG000251716
HOVERGEN:HBG081945 InParanoid:Q9UI17 KO:K00315 OMA:REVGKMI
OrthoDB:EOG466VK7 PhylomeDB:Q9UI17 GenomeRNAi:29958 NextBio:52675
ArrayExpress:Q9UI17 Bgee:Q9UI17 CleanEx:HS_DMGDH
Genevestigator:Q9UI17 GermOnline:ENSG00000132837 GO:GO:0047865
Uniprot:Q9UI17
Length = 866
Score = 122 (48.0 bits), Expect = 0.00067, P = 0.00067
Identities = 45/207 (21%), Positives = 95/207 (45%)
Query: 229 ITASHLHTRSKVSVFDVSHMLQTVVTGKHREEWLESICVADVHELDPGKGTLSLFTNEQG 288
+ + + +V+V D+S + + G+ L+ + + ++ G +S +G
Sbjct: 518 VGSEYKQVMQRVAVTDLSPFGKFNIKGQDSIRLLDHLFANVIPKV--GFTNISHMLTPKG 575
Query: 289 GIQDDLIVTKTLEDSLFLVSNASRRKVDMDLMVAAQDRFKSLGKDIHLQFLSAEERGLIA 348
+ +L V+ L++ + DL ++ K G D+ ++ ++ +E G++
Sbjct: 576 RVYAELTVSHQSPGEFLLITGSGSEL--HDLRWIEEEAVKG-GYDVEIKNIT-DELGVLG 631
Query: 349 VQGPLSSTILQRHTDLDLSS--LYFMTSRPCTIAGIPCTLTRAGYTGEDGVEISVPGEQC 406
V GP + +LQ+ T DLS F+ ++ ++ IP T R YTGE G E+ E
Sbjct: 632 VAGPQARKVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDS 691
Query: 407 THIVEALLS---DEDVKLAGLGARDSL 430
+ +A+++ +E + G A ++L
Sbjct: 692 VALYDAIMNAGQEEGIDNFGTYAMNAL 718
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 555 531 0.00092 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 71
No. of states in DFA: 610 (65 KB)
Total size of DFA: 268 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 42.47u 0.07s 42.54t Elapsed: 00:00:16
Total cpu time: 42.49u 0.08s 42.57t Elapsed: 00:00:17
Start: Thu Aug 15 14:06:56 2013 End: Thu Aug 15 14:07:13 2013