Your job contains 1 sequence.
>psy4856
LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR
VILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDSLYPLH
ATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDGDTVAV
RLLPESQWSAPLELVLEDEGSGEDEEGEDGKLIKGNKTVPPAERRPTGQIVGIIKRKWRQ
YCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWPRHSRYPQGH
FVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPWEKSTGRPWCSGTSIGLSQ
ISTGVISVGLEQGFPSLLKPRTTFVFYDFPRTTRTNFILLFLFQAVYFSSGMLQQSDFHH
YGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHY
GLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNLPGCTDIDD
ALHCRPLPNGNIEVTYPSLGMSQSCKDIQACLLELGYNLNYRNRQAQYAGRASVALHTHL
FFRRKSITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEVTYPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4856
(654 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039183 - symbol:Dis3 "Dis3" species:7227 "Drosoph... 927 4.0e-128 3
UNIPROTKB|E1BXX6 - symbol:DIS3 "Uncharacterized protein" ... 784 2.4e-116 3
UNIPROTKB|E2RNY6 - symbol:DIS3 "Uncharacterized protein" ... 806 2.8e-115 3
UNIPROTKB|F1N1R4 - symbol:DIS3 "Uncharacterized protein" ... 802 7.3e-115 3
MGI|MGI:1919912 - symbol:Dis3 "DIS3 mitotic control homol... 817 1.5e-108 2
UNIPROTKB|Q9Y2L1 - symbol:DIS3 "Exosome complex exonuclea... 815 6.4e-108 2
ZFIN|ZDB-GENE-080213-3 - symbol:dis3 "DIS3 mitotic contro... 807 6.4e-108 2
RGD|1304646 - symbol:Dis3 "DIS3 mitotic control homolog (... 819 2.0e-100 2
UNIPROTKB|F2Z2C0 - symbol:DIS3 "Exosome complex exonuclea... 815 1.8e-99 2
UNIPROTKB|F1RHF7 - symbol:DIS3 "Uncharacterized protein" ... 593 6.9e-93 3
UNIPROTKB|G3V1J5 - symbol:DIS3 "Exosome complex exonuclea... 656 3.8e-91 2
DICTYBASE|DDB_G0293614 - symbol:DDB_G0293614 "putative ex... 626 4.2e-80 2
POMBASE|SPBC26H8.10 - symbol:dis3 "3'-5' exoribonuclease ... 620 2.6e-79 2
ASPGD|ASPL0000011287 - symbol:AN3657 species:162425 "Emer... 387 3.5e-78 4
WB|WBGene00001001 - symbol:dis-3 species:6239 "Caenorhabd... 571 3.3e-75 2
UNIPROTKB|G4NDV8 - symbol:MGG_00193 "Mitotic control prot... 360 1.0e-74 4
SGD|S000005381 - symbol:DIS3 "Exosome core complex cataly... 359 4.4e-70 4
CGD|CAL0003527 - symbol:orf19.5229 species:5476 "Candida ... 351 1.6e-66 3
UNIPROTKB|F1NKN5 - symbol:LOC100857630 "Uncharacterized p... 392 6.2e-49 3
ZFIN|ZDB-GENE-070209-95 - symbol:dis3l "DIS3 mitotic cont... 382 1.9e-47 3
UNIPROTKB|A0JN80 - symbol:DIS3L "DIS3-like exonuclease 1"... 371 5.6e-47 4
UNIPROTKB|F1MEA6 - symbol:DIS3L "DIS3-like exonuclease 1"... 371 5.6e-47 4
MGI|MGI:2143272 - symbol:Dis3l "DIS3 mitotic control homo... 366 4.7e-46 4
UNIPROTKB|Q5R5N8 - symbol:DIS3L "DIS3-like exonuclease 1"... 360 8.1e-46 4
RGD|1308959 - symbol:Dis3l "DIS3 mitotic control homolog ... 365 1.0e-45 4
UNIPROTKB|Q8TF46 - symbol:DIS3L "DIS3-like exonuclease 1"... 358 3.6e-45 4
UNIPROTKB|Q0P4R5 - symbol:dis3l "DIS3-like exonuclease 1"... 349 1.6e-43 3
UNIPROTKB|Q6GN11 - symbol:dis3l "DIS3-like exonuclease 1"... 341 5.9e-42 3
DICTYBASE|DDB_G0268186 - symbol:DDB_G0268186 species:4468... 291 1.0e-36 4
UNIPROTKB|I3LEH1 - symbol:DIS3L "Uncharacterized protein"... 269 2.0e-34 4
UNIPROTKB|F1SJJ9 - symbol:DIS3L "Uncharacterized protein"... 266 4.3e-34 4
MGI|MGI:2442555 - symbol:Dis3l2 "DIS3 mitotic control hom... 189 1.5e-26 3
RGD|1560168 - symbol:Dis3l2 "DIS3 mitotic control homolog... 190 4.1e-26 3
UNIPROTKB|E2QZ40 - symbol:DIS3L2 "Uncharacterized protein... 183 1.1e-25 3
UNIPROTKB|F6XKS7 - symbol:DIS3L2 "Uncharacterized protein... 183 1.2e-25 3
GENEDB_PFALCIPARUM|MAL13P1.289 - symbol:MAL13P1.289 "mito... 170 9.9e-25 5
UNIPROTKB|Q8IDB6 - symbol:MAL13P1.289 "Mitotic control pr... 170 9.9e-25 5
UNIPROTKB|E1B7R0 - symbol:DIS3L2 "Uncharacterized protein... 171 1.2e-24 3
UNIPROTKB|Q8IYB7 - symbol:DIS3L2 "DIS3-like exonuclease 2... 178 4.6e-24 3
ZFIN|ZDB-GENE-070705-171 - symbol:si:ch211-273k1.4 "si:ch... 163 1.3e-21 3
UNIPROTKB|E1C372 - symbol:DIS3L2 "Uncharacterized protein... 179 3.9e-21 3
WB|WBGene00018612 - symbol:F48E8.6 species:6239 "Caenorha... 145 6.3e-21 3
POMBASE|SPAC2C4.07c - symbol:SPAC2C4.07c "ribonuclease II... 150 4.5e-19 3
UNIPROTKB|F1PK78 - symbol:DIS3L "Uncharacterized protein"... 178 8.6e-18 4
TAIR|locus:2203231 - symbol:AT1G77680 species:3702 "Arabi... 173 4.4e-17 4
ASPGD|ASPL0000054659 - symbol:AN1158 species:162425 "Emer... 146 6.7e-17 3
SGD|S000002701 - symbol:SSD1 "Translational repressor wit... 148 3.4e-14 3
CGD|CAL0003016 - symbol:SSD1 species:5476 "Candida albica... 138 4.2e-13 3
UNIPROTKB|Q5AK62 - symbol:SSD1 "Putative uncharacterized ... 138 4.2e-13 3
DICTYBASE|DDB_G0278757 - symbol:DDB_G0278757 "DIS3-like e... 160 4.5e-13 4
UNIPROTKB|H7C440 - symbol:DIS3L2 "DIS3-like exonuclease 2... 178 1.7e-10 1
UNIPROTKB|I3LLL5 - symbol:I3LLL5 "Uncharacterized protein... 171 1.0e-09 1
POMBASE|SPBC609.01 - symbol:SPBC609.01 "ribonuclease II (... 93 1.8e-08 3
FB|FBgn0035111 - symbol:CG16940 species:7227 "Drosophila ... 161 6.6e-08 1
TIGR_CMR|GSU_1485 - symbol:GSU_1485 "ribonuclease R, puta... 118 1.0e-07 2
TIGR_CMR|CHY_0289 - symbol:CHY_0289 "ribonuclease R" spec... 114 3.9e-07 2
TIGR_CMR|BA_5334 - symbol:BA_5334 "ribonuclease R" specie... 120 7.9e-07 3
POMBASE|SPCC16C4.09 - symbol:sts5 "RNB-like protein" spec... 96 1.8e-06 4
TIGR_CMR|CBU_1091 - symbol:CBU_1091 "ribonuclease R" spec... 100 4.1e-06 2
TIGR_CMR|CPS_4617 - symbol:CPS_4617 "ribonuclease R" spec... 128 6.4e-06 2
GENEDB_PFALCIPARUM|PFF0745c - symbol:PFF0745c "ribonuclea... 115 6.4e-06 4
>FB|FBgn0039183 [details] [associations]
symbol:Dis3 "Dis3" species:7227 "Drosophila melanogaster"
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=ISS] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=ISS;IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005652 "nuclear lamina" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0071027 "nuclear RNA
surveillance" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0022008 GO:GO:0003723 GO:GO:0004540 GO:GO:0010468
GO:GO:0005652 GO:GO:0000176 InterPro:IPR022966 PROSITE:PS01175
SMART:SM00670 GO:GO:0071027 FlyBase:FBgn0039183 EMBL:AJ276897
ProteinModelPortal:Q9BI20 STRING:Q9BI20 PRIDE:Q9BI20
InParanoid:Q9BI20 ArrayExpress:Q9BI20 Bgee:Q9BI20 Uniprot:Q9BI20
Length = 983
Score = 927 (331.4 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 185/359 (51%), Positives = 242/359 (67%)
Query: 3 DLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWY----------VKYE 52
+++ + +R FYVFVNEHH ETY ++EP E+ NDRNDRA+R WY ++E
Sbjct: 109 EIVHDRTRNFYVFVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFE 168
Query: 53 EHLESAVRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSV 112
++A RV+LL++D NR A G+L ++ Y+ +L + L+DKLS K S
Sbjct: 169 RSGKAATRVVLLTDDAANRAKAEAEGILVTTAAEYVKSLEDFPLLMDKLSHKTF---DSE 225
Query: 113 KDSL--YPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLN 170
K+ L YP H + E+ G++ LLQG+FQASREN+LEG VN E ++K IL+QGRE LN
Sbjct: 226 KNGLPQYPPHLSMKELLEGLRQNKLLQGTFQASRENYLEGTVNVEKFEKGILIQGRESLN 285
Query: 171 RAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPP-------AE 223
RA+DGD VAV LLPE++WSAP + N+ + AE
Sbjct: 286 RAVDGDLVAVELLPEAEWSAPSEIVLEEKNVYADEVPSEERAKDENEMLNQVRAAALSAE 345
Query: 224 RRPTGQIVGIIKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRI 283
R PTG+IVGI++RKWRQYCGILQP+ + ++RH+FVPA+RKIP+IR+ETRQ A L QRI
Sbjct: 346 RTPTGRIVGIVRRKWRQYCGILQPSLIEDTNRHIFVPADRKIPRIRIETRQAAMLQNQRI 405
Query: 284 VVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
+V ID+WPR+SRYP GHFVR+LGP+GD TENEV+LLEHDVPH KFSD VLS+LP MPW
Sbjct: 406 IVTIDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPW 464
Score = 278 (102.9 bits), Expect = 2.2e-120, Sum P(2) = 2.2e-120
Identities = 52/78 (66%), Positives = 64/78 (82%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ QAVYF SG LQ+ +F HYGLA PIYTHFTSPIRRY+DI+VHRLLAA IGAD+TY LL
Sbjct: 756 MMQAVYFISGSLQKEEFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTYAQLL 815
Query: 462 DKKASTALCYNLVSDFHH 479
D+K++ LC+NL ++ H
Sbjct: 816 DRKSNEELCHNL--NYRH 831
Score = 232 (86.7 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 42/57 (73%), Positives = 50/57 (87%)
Query: 476 DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNL 532
+F HYGLA PIYTHFTSPIRRY+DI+VHRLLAA IGAD+TY LLD+K++ LC+NL
Sbjct: 771 EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTYAQLLDRKSNEELCHNL 827
Score = 192 (72.6 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 33/45 (73%), Positives = 40/45 (88%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+IT+E+ ++R DLR L +CSVDPPGCTDIDDALHCR LPNGN+EV
Sbjct: 465 TITDEDYSKRVDLRDLYICSVDPPGCTDIDDALHCRELPNGNLEV 509
Score = 134 (52.2 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 574 ELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEE 610
EL +NLNYR++ AQYAGRASVAL+THLFFR K EE
Sbjct: 822 ELCHNLNYRHKMAQYAGRASVALNTHLFFRGKEEDEE 858
Score = 121 (47.7 bits), Expect = 1.9e-116, Sum P(3) = 1.9e-116
Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 513 DATYPSLLDKKASTALCYNLPGCTDIDDALHCRPLPNGNIEV 554
D Y +D + + PGCTDIDDALHCR LPNGN+EV
Sbjct: 468 DEDYSKRVDLRDLYICSVDPPGCTDIDDALHCRELPNGNLEV 509
>UNIPROTKB|E1BXX6 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0016075 "rRNA catabolic process" evidence=IEA]
[GO:0071034 "CUT catabolic process" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005654 GO:GO:0003723 GO:GO:0005085 GO:GO:0004519
GO:GO:0016075 GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 CTD:22894 EMBL:AADN02042596
IPI:IPI00592352 RefSeq:XP_417016.2 ProteinModelPortal:E1BXX6
Ensembl:ENSGALT00000027368 GeneID:418821 KEGG:gga:418821
NextBio:20821959 Uniprot:E1BXX6
Length = 963
Score = 784 (281.0 bits), Expect = 2.4e-116, Sum P(3) = 2.4e-116
Identities = 159/353 (45%), Positives = 222/353 (62%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESA-- 58
++D+I NP + FY F NEHH ETY++QE GES NDRNDRA+R WY ++ + +++
Sbjct: 110 IRDVIGNPEKHFYSFTNEHHRETYIQQEQGESSNDRNDRAIRVAVKWYSEHLKKIQNEEN 169
Query: 59 --VRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDS 115
++VI L+ D N++ A + G+ + E YI +L + L+D+L+ + E
Sbjct: 170 EDIQVIFLTNDRNNKEKALEEGITAYTCEEYIKSLIDNPDLVDRLACVSDEGKEIESGKI 229
Query: 116 LYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEG---YDKPILVQGREGLNRA 172
++P H S++ GIK+ LQG+++ASREN+LE V G +K I++QG + LNRA
Sbjct: 230 IFPEHIPLSKLQQGIKSGIYLQGTYRASRENYLEATVWVHGDAEENKEIIIQGLKHLNRA 289
Query: 173 IDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXK---LIKGNKTVPPAERRPTGQ 229
+ D VAV LL + +W AP + ++K + V RPTG+
Sbjct: 290 VHEDIVAVELLAKDEWVAPSSVVLQDDGQNEDDIEMEEEKENILKAS--VNKNMLRPTGK 347
Query: 230 IVGIIKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDS 289
+VGIIKR WR +CG+L + + + RHLF+PA+R IP+IR+ETRQ L GQRI+VAID
Sbjct: 348 VVGIIKRNWRPFCGMLSKSQIKEARRHLFIPADRSIPRIRIETRQADKLEGQRIIVAIDG 407
Query: 290 WPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
WPR+SRYP GHFV+ LG GDK+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 408 WPRNSRYPNGHFVKNLGSAGDKETETEVLLLEHDVPHQPFSQNVLSFLPKMPW 460
Score = 278 (102.9 bits), Expect = 2.4e-116, Sum P(3) = 2.4e-116
Identities = 60/94 (63%), Positives = 65/94 (69%)
Query: 388 DFPRTTRTNFILLF--LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHR 445
DFP IL + QAVYF SGM SDFHHYGLA+PIYTHFTSPIRRYADIIVHR
Sbjct: 735 DFPYLNTLLRILTTRCMMQAVYFCSGM--DSDFHHYGLASPIYTHFTSPIRRYADIIVHR 792
Query: 446 LLAACIGADATYPSLLDKKASTALCYNLVSDFHH 479
LLA IGAD+TYP L DK LC NL ++ H
Sbjct: 793 LLAVAIGADSTYPELTDKHKLADLCKNL--NYRH 824
Score = 250 (93.1 bits), Expect = 2.2e-113, Sum P(3) = 2.2e-113
Identities = 47/63 (74%), Positives = 50/63 (79%)
Query: 470 CYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
C + SDFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD+TYP L DK LC
Sbjct: 758 CSGMDSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTYPELTDKHKLADLC 817
Query: 530 YNL 532
NL
Sbjct: 818 KNL 820
Score = 189 (71.6 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SITE+++ R DLRHL VCSVDPPGCTDIDDALHCR + NGN+EV
Sbjct: 461 SITEKDMKYREDLRHLYVCSVDPPGCTDIDDALHCREIENGNLEV 505
Score = 119 (46.9 bits), Expect = 2.4e-116, Sum P(3) = 2.4e-116
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L +L NLNYR++ AQYA RASVA HT LFF+ K + E+
Sbjct: 813 LADLCKNLNYRHKMAQYAQRASVAFHTQLFFKTKGVVNED 852
Score = 108 (43.1 bits), Expect = 1.9e-98, Sum P(3) = 1.9e-98
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR + NGN+EV
Sbjct: 484 PGCTDIDDALHCREIENGNLEV 505
>UNIPROTKB|E2RNY6 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071034 "CUT catabolic process" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005654 GO:GO:0003723 GO:GO:0005085 GO:GO:0004519
GO:GO:0016075 GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 CTD:22894 EMBL:AAEX03013240
RefSeq:XP_542610.3 Ensembl:ENSCAFT00000008080 GeneID:485491
KEGG:cfa:485491 NextBio:20859485 Uniprot:E2RNY6
Length = 958
Score = 806 (288.8 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 161/349 (46%), Positives = 226/349 (64%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHL--ESA 58
++D+ +N + FY F NEHH ETYVEQE GE+ NDRNDRA+R A WY ++ + + E+
Sbjct: 109 IRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSAENH 168
Query: 59 VRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLY 117
++VI ++ D +N++ A + G+ + E Y+ +L+ L+D+L+ E E ++
Sbjct: 169 LQVIFITNDRKNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIENGRIIF 228
Query: 118 PLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEG---YDKPILVQGREGLNRAID 174
H S++ GIK+ + LQG+F+ASREN+LE V G DK I++QG + LNRA+
Sbjct: 229 SEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWVHGDTEEDKEIILQGLKHLNRAVH 288
Query: 175 GDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKT-VPPAERRPTGQIVGI 233
D VA+ LLP++QW AP + + KT V +PTG++VGI
Sbjct: 289 EDIVAIELLPKNQWVAPSSVVLHDEGQNEDDVEKEEERERILKTAVSEKMLKPTGRVVGI 348
Query: 234 IKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWPRH 293
IKR WR YCG+L + + S RHLF PA+R+IP+IR+ETRQ + L G+RI+VAID WPR+
Sbjct: 349 IKRNWRPYCGMLSKSDIKESRRHLFTPADRRIPRIRIETRQASALEGRRIIVAIDGWPRN 408
Query: 294 SRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
SRYP GHFV+ LG +G+K+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 409 SRYPNGHFVKNLGEVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPW 457
Score = 275 (101.9 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 55/78 (70%), Positives = 59/78 (75%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ QAVYF SGM +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD TYP L
Sbjct: 748 MMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELT 805
Query: 462 DKKASTALCYNLVSDFHH 479
DK LC NL +F H
Sbjct: 806 DKHKLADLCKNL--NFRH 821
Score = 246 (91.7 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 46/63 (73%), Positives = 49/63 (77%)
Query: 470 CYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
C + +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD TYP L DK LC
Sbjct: 755 CSGMDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELTDKHKLADLC 814
Query: 530 YNL 532
NL
Sbjct: 815 KNL 817
Score = 193 (73.0 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SITE+++ R DLRHL VCSVDPPGCTDIDDALHCR L NGN+EV
Sbjct: 458 SITEKDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELENGNLEV 502
Score = 119 (46.9 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L +L NLN+R++ AQYA RASVA HT LFF+ K I EE
Sbjct: 810 LADLCKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEE 849
Score = 110 (43.8 bits), Expect = 5.6e-101, Sum P(3) = 5.6e-101
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR L NGN+EV
Sbjct: 481 PGCTDIDDALHCRELENGNLEV 502
Score = 38 (18.4 bits), Expect = 2.8e-82, Sum P(2) = 2.8e-82
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 310 DKDTENEVLLLEHDVPHSKFSDLV 333
+KD L+ + +VP K D V
Sbjct: 877 EKDKPKPKLIYDDEVPSLKIEDTV 900
>UNIPROTKB|F1N1R4 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071034 "CUT catabolic process" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005654 GO:GO:0003723 GO:GO:0005085 GO:GO:0004519
GO:GO:0016075 GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 EMBL:DAAA02033486 EMBL:DAAA02033485
IPI:IPI01017508 Ensembl:ENSBTAT00000026500 Uniprot:F1N1R4
Length = 951
Score = 802 (287.4 bits), Expect = 7.3e-115, Sum P(3) = 7.3e-115
Identities = 163/349 (46%), Positives = 225/349 (64%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHL--ESA 58
++D+ +N + FY F NEHH ETYVEQ GE+ NDRNDRA+R A WY ++ +++ E+
Sbjct: 109 IRDMTNNQEKHFYTFTNEHHRETYVEQLQGENSNDRNDRAIRVAAKWYNEHLKNMSAENR 168
Query: 59 VRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLY 117
++VI ++ D +N++ A + G+ + E YI +L+ L+D+L+ E E +++
Sbjct: 169 LQVIFITNDRKNKEKAIEEGIPAFTCEEYIKSLTANPELIDRLACLSEEGNEIESGKTIF 228
Query: 118 PLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYD---KPILVQGREGLNRAID 174
H S++ GIK+ + LQG+F+ASREN+LE V D K IL+QG + LNRAI
Sbjct: 229 SEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWVHSDDEDNKEILLQGLKNLNRAIH 288
Query: 175 GDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKT-VPPAERRPTGQIVGI 233
D VAV LLP+ QW AP + KT V +PTG++VGI
Sbjct: 289 EDIVAVELLPKHQWVAPSSVVLQDEGQNEDDIEKEEERECILKTAVNEKMLKPTGRVVGI 348
Query: 234 IKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWPRH 293
IKR WR YCG+L + + S RHLF PA+++IP+IR+ETRQ +TL G+RI+VA+D WPR+
Sbjct: 349 IKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRIIVAVDGWPRN 408
Query: 294 SRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
SRYP GHFV+ LG +GDK+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 409 SRYPNGHFVKNLGEVGDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPW 457
Score = 275 (101.9 bits), Expect = 7.2e-107, Sum P(2) = 7.2e-107
Identities = 55/78 (70%), Positives = 59/78 (75%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ QAVYF SGM +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD TYP L
Sbjct: 741 MMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELT 798
Query: 462 DKKASTALCYNLVSDFHH 479
DK LC NL +F H
Sbjct: 799 DKHKLADLCKNL--NFRH 814
Score = 246 (91.7 bits), Expect = 7.3e-115, Sum P(3) = 7.3e-115
Identities = 46/63 (73%), Positives = 49/63 (77%)
Query: 470 CYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
C + +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD TYP L DK LC
Sbjct: 748 CSGMDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELTDKHKLADLC 807
Query: 530 YNL 532
NL
Sbjct: 808 KNL 810
Score = 193 (73.0 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SITE+++ R DLRHL VCSVDPPGCTDIDDALHCR L NGN+EV
Sbjct: 458 SITEKDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELENGNLEV 502
Score = 119 (46.9 bits), Expect = 7.3e-115, Sum P(3) = 7.3e-115
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L +L NLN+R++ AQYA RASVA HT LFF+ K I EE
Sbjct: 803 LADLCKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEE 842
Score = 110 (43.8 bits), Expect = 1.5e-100, Sum P(3) = 1.5e-100
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR L NGN+EV
Sbjct: 481 PGCTDIDDALHCRELENGNLEV 502
Score = 42 (19.8 bits), Expect = 2.8e-82, Sum P(2) = 2.8e-82
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 310 DKDTENEVLLLEHDVPHSKFSDLV 333
+KD N L+ + ++P K D V
Sbjct: 870 EKDKPNPRLIYDDEIPSLKIEDTV 893
>MGI|MGI:1919912 [details] [associations]
symbol:Dis3 "DIS3 mitotic control homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=ISO] [GO:0000176 "nuclear exosome (RNase
complex)" evidence=ISO] [GO:0000178 "exosome (RNase complex)"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=ISO] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0016075 "rRNA
catabolic process" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0071034 "CUT catabolic process" evidence=ISO]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 MGI:MGI:1919912
InterPro:IPR006596 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0003723 GO:GO:0005085 GO:GO:0004519 GO:GO:0016075
GO:GO:0006364 GO:GO:0000176 GO:GO:0000175 eggNOG:COG0557
HOGENOM:HOG000191945 HOVERGEN:HBG059397 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 GO:GO:0071034 CTD:22894 OrthoDB:EOG45B1DT
EMBL:AK012840 EMBL:AK032091 EMBL:AK129259 IPI:IPI00407764
RefSeq:NP_082591.2 UniGene:Mm.163339 ProteinModelPortal:Q9CSH3
SMR:Q9CSH3 STRING:Q9CSH3 PhosphoSite:Q9CSH3 PaxDb:Q9CSH3
PRIDE:Q9CSH3 Ensembl:ENSMUST00000042471 GeneID:72662 KEGG:mmu:72662
UCSC:uc007uuw.1 InParanoid:Q9CSH3 NextBio:336687 Bgee:Q9CSH3
CleanEx:MM_DIS3 Genevestigator:Q9CSH3 Uniprot:Q9CSH3
Length = 958
Score = 817 (292.7 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 164/349 (46%), Positives = 226/349 (64%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHL--ESA 58
++D+ +N + FY F NEHH ETY+EQE GE+ NDRNDRA+R A WY ++ + + +S
Sbjct: 109 IRDVTNNQEKHFYTFTNEHHKETYIEQEQGENANDRNDRAIRVAAKWYNEHLKRVAADSQ 168
Query: 59 VRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSK-KEAVVETSVKDSLY 117
++VIL++ D +N++ A Q G+ + E Y+ +L+ L+D+L+ + + E ++
Sbjct: 169 LQVILITNDRKNKEKAVQEGIPAFTCEEYVKSLTANPELIDRLAYLSDEMNEIESGKIIF 228
Query: 118 PLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEG---YDKPILVQGREGLNRAID 174
H S++ GIK+ S LQG+F+ASREN+LE V G +K IL+QG + LNRA+
Sbjct: 229 SEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNRAVH 288
Query: 175 GDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKT-VPPAERRPTGQIVGI 233
D VAV LLP SQW AP + KT V RPTG++VGI
Sbjct: 289 EDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKMLRPTGRVVGI 348
Query: 234 IKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWPRH 293
IKR WR YCG+L + + S RHLF PA+++IP+IR+ETRQ + L G+RI+VAID WPR+
Sbjct: 349 IKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRIIVAIDGWPRN 408
Query: 294 SRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
SRYP GHFV+ LG +G+K+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 409 SRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPW 457
Score = 276 (102.2 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 59/94 (62%), Positives = 65/94 (69%)
Query: 388 DFPRTTRTNFILLF--LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHR 445
DFP IL + QAVYF SGM +DFHHYGLA+PIYTHFTSPIRRYADIIVHR
Sbjct: 732 DFPYLNTLLRILATRCMMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADIIVHR 789
Query: 446 LLAACIGADATYPSLLDKKASTALCYNLVSDFHH 479
LLA IGAD TYP L DK + +C NL +F H
Sbjct: 790 LLAVAIGADCTYPELTDKHKLSDICKNL--NFRH 821
Score = 245 (91.3 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 45/63 (71%), Positives = 50/63 (79%)
Query: 470 CYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
C + +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD TYP L DK + +C
Sbjct: 755 CSGMDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELTDKHKLSDIC 814
Query: 530 YNL 532
NL
Sbjct: 815 KNL 817
Score = 197 (74.4 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 36/45 (80%), Positives = 39/45 (86%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SITEE++ R DLRHL VCSVDPPGCTDIDDALHCR L NGN+EV
Sbjct: 458 SITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEV 502
Score = 122 (48.0 bits), Expect = 1.9e-102, Sum P(3) = 1.9e-102
Identities = 29/59 (49%), Positives = 34/59 (57%)
Query: 553 EVTYPSLGMSQSCKDIQACLLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
+ TYP L DI C NLN+R++ AQYA RASVA HT LFF+ K I EE
Sbjct: 798 DCTYPELTDKHKLSDI--CK-----NLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEE 849
Score = 110 (43.8 bits), Expect = 1.9e-102, Sum P(3) = 1.9e-102
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR L NGN+EV
Sbjct: 481 PGCTDIDDALHCRELSNGNLEV 502
>UNIPROTKB|Q9Y2L1 [details] [associations]
symbol:DIS3 "Exosome complex exonuclease RRP44"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0000178 "exosome (RNase complex)" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0000176 "nuclear exosome (RNase complex)" evidence=IDA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IMP]
[GO:0004519 "endonuclease activity" evidence=IMP] [GO:0016075 "rRNA
catabolic process" evidence=IMP] [GO:0071034 "CUT catabolic
process" evidence=IMP] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0043928
"exonucleolytic nuclear-transcribed mRNA catabolic process involved
in deadenylation-dependent decay" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
InterPro:IPR006596 GO:GO:0005829 GO:GO:0005654 GO:GO:0003723
GO:GO:0005085 GO:GO:0004519 GO:GO:0016075 GO:GO:0006364
EMBL:AL138695 GO:GO:0000176 GO:GO:0000175 GO:GO:0043928
eggNOG:COG0557 HOVERGEN:HBG059397 InterPro:IPR022966
PROSITE:PS01175 KO:K12585 OMA:MPWSITE SMART:SM00670 EMBL:CH471093
GO:GO:0071034 EMBL:AL391384 EMBL:AF330044 EMBL:AB023225
EMBL:AL832266 EMBL:AK314715 EMBL:AL080158 EMBL:BC056143
IPI:IPI00183462 IPI:IPI00746351 PIR:JE0110 RefSeq:NP_001121698.1
RefSeq:NP_055768.3 UniGene:Hs.740506 ProteinModelPortal:Q9Y2L1
SMR:Q9Y2L1 IntAct:Q9Y2L1 STRING:Q9Y2L1 PhosphoSite:Q9Y2L1
DMDM:73620993 SWISS-2DPAGE:Q9Y2L1 PaxDb:Q9Y2L1 PRIDE:Q9Y2L1
Ensembl:ENST00000377767 Ensembl:ENST00000377780 GeneID:22894
KEGG:hsa:22894 UCSC:uc001vix.4 UCSC:uc001viy.4 CTD:22894
GeneCards:GC13M073329 H-InvDB:HIX0011365 HGNC:HGNC:20604
HPA:HPA039281 MIM:607533 neXtProt:NX_Q9Y2L1 PharmGKB:PA162383628
InParanoid:Q9Y2L1 OrthoDB:EOG45B1DT PhylomeDB:Q9Y2L1 ChiTaRS:DIS3
GenomeRNAi:22894 NextBio:43511 ArrayExpress:Q9Y2L1 Bgee:Q9Y2L1
CleanEx:HS_DIS3 Genevestigator:Q9Y2L1 GermOnline:ENSG00000083520
Uniprot:Q9Y2L1
Length = 958
Score = 815 (292.0 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 163/349 (46%), Positives = 227/349 (65%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHL--ESA 58
++D+ +N + FY F NEHH ETYVEQE GE+ NDRNDRA+R A WY ++ + + ++
Sbjct: 109 IRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQ 168
Query: 59 VRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLY 117
++VI ++ D RN++ A + G+ + E Y+ +L+ L+D+L+ E E ++
Sbjct: 169 LQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIESGKIIF 228
Query: 118 PLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEG---YDKPILVQGREGLNRAID 174
H S++ GIK+ + LQG+F+ASREN+LE V G +K I++QG + LNRA+
Sbjct: 229 SEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWIHGDNEENKEIILQGLKHLNRAVH 288
Query: 175 GDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKT-VPPAERRPTGQIVGI 233
D VAV LLP+SQW AP + + KT V +PTG++VGI
Sbjct: 289 EDIVAVELLPKSQWVAPSSVVLHDEGQNEEDVEKEEETERMLKTAVSEKMLKPTGRVVGI 348
Query: 234 IKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWPRH 293
IKR WR YCG+L + + S RHLF PA+++IP+IR+ETRQ +TL G+RI+VAID WPR+
Sbjct: 349 IKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRN 408
Query: 294 SRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
SRYP GHFVR LG +G+K+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 409 SRYPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPW 457
Score = 272 (100.8 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 53/78 (67%), Positives = 59/78 (75%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ QAVYF SGM +DFHHYGLA+PIYTHFTSPIRRYAD+IVHRLLA IGAD TYP L
Sbjct: 748 MMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELT 805
Query: 462 DKKASTALCYNLVSDFHH 479
DK +C NL +F H
Sbjct: 806 DKHKLADICKNL--NFRH 821
Score = 243 (90.6 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 44/63 (69%), Positives = 49/63 (77%)
Query: 470 CYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
C + +DFHHYGLA+PIYTHFTSPIRRYAD+IVHRLLA IGAD TYP L DK +C
Sbjct: 755 CSGMDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTDKHKLADIC 814
Query: 530 YNL 532
NL
Sbjct: 815 KNL 817
Score = 192 (72.6 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SITE+++ R DLRHL +CSVDPPGCTDIDDALHCR L NGN+EV
Sbjct: 458 SITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLEV 502
Score = 121 (47.7 bits), Expect = 3.9e-102, Sum P(3) = 3.9e-102
Identities = 29/59 (49%), Positives = 34/59 (57%)
Query: 553 EVTYPSLGMSQSCKDIQACLLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
+ TYP L DI C NLN+R++ AQYA RASVA HT LFF+ K I EE
Sbjct: 798 DCTYPELTDKHKLADI--CK-----NLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEE 849
Score = 110 (43.8 bits), Expect = 3.9e-102, Sum P(3) = 3.9e-102
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR L NGN+EV
Sbjct: 481 PGCTDIDDALHCRELENGNLEV 502
Score = 43 (20.2 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 310 DKDTENEVLLLEHDVPHSKFSDLV 333
+KD N L+ + ++P K D V
Sbjct: 877 EKDKPNPQLIYDDEIPSLKIEDTV 900
>ZFIN|ZDB-GENE-080213-3 [details] [associations]
symbol:dis3 "DIS3 mitotic control homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
ZFIN:ZDB-GENE-080213-3 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
KO:K12585 SMART:SM00670 CTD:22894 EMBL:BX571717 IPI:IPI00803594
RefSeq:XP_001336850.2 UniGene:Dr.51536 ProteinModelPortal:E7FE01
Ensembl:ENSDART00000085454 GeneID:100003553 KEGG:dre:100003553
NextBio:20785882 Bgee:E7FE01 Uniprot:E7FE01
Length = 950
Score = 807 (289.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 167/352 (47%), Positives = 218/352 (61%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESA-- 58
+KD I + FY F NEHH ET++E+E GES NDRNDRA+R A WY +HL A
Sbjct: 106 IKDAIHEKEKHFYTFTNEHHRETFIEREQGESANDRNDRAIRVAAKWYT---DHLAKATD 162
Query: 59 ---VRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSK-KEAVVETSVKD 114
++V+LL+ D N++ A Q GL E YI +L L+D+L+ + E +
Sbjct: 163 GGTLKVVLLTNDRANKEKAEQFGLTVYRCEEYIKSLVGNPELVDRLAMTSDDQNEITGSK 222
Query: 115 SLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQV--NCEGYD-KPILVQGREGLNR 171
L+P H S I GIKN +QG+F A+R+N+LEG V N EG D IL+QG + LNR
Sbjct: 223 LLFPEHLPLSRIQTGIKNGVFIQGTFHANRDNYLEGTVFVNREGEDINEILLQGLQNLNR 282
Query: 172 AIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPAE-RRPTGQI 230
A++ D VAV L P+ +W AP K + +PTG++
Sbjct: 283 AVNQDVVAVELFPKDRWVAPSSVVLQDDNLNDEDTEEDENDSKLKSVASESSVLKPTGRV 342
Query: 231 VGIIKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSW 290
VGIIKR WR +CG+L + + ++RHLF PA+R+IP+IR+ETRQ ATL GQRI+VAID W
Sbjct: 343 VGIIKRNWRPFCGMLAQSQIKEATRHLFTPADRRIPRIRIETRQAATLIGQRIMVAIDGW 402
Query: 291 PRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
P++SRYP GHFV+ LG GDK+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 403 PKNSRYPNGHFVKNLGTAGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPW 454
Score = 280 (103.6 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 54/78 (69%), Positives = 62/78 (79%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ QAVYF SGM SDFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA I AD+TYP L+
Sbjct: 745 MMQAVYFCSGM--DSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAINADSTYPDLM 802
Query: 462 DKKASTALCYNLVSDFHH 479
DK +ALC N+ ++ H
Sbjct: 803 DKHKQSALCNNI--NYRH 818
Score = 254 (94.5 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 46/63 (73%), Positives = 52/63 (82%)
Query: 470 CYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
C + SDFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA I AD+TYP L+DK +ALC
Sbjct: 752 CSGMDSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAINADSTYPDLMDKHKQSALC 811
Query: 530 YNL 532
N+
Sbjct: 812 NNI 814
Score = 191 (72.3 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
Identities = 35/44 (79%), Positives = 38/44 (86%)
Query: 607 ITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
ITEE++ R DLRHL VCSVDPPGCTDIDDALHCR L NGN+EV
Sbjct: 456 ITEEDLKVRADLRHLCVCSVDPPGCTDIDDALHCRELENGNLEV 499
Score = 125 (49.1 bits), Expect = 1.0e-101, Sum P(3) = 1.0e-101
Identities = 31/61 (50%), Positives = 37/61 (60%)
Query: 551 NIEVTYPSLGMSQSCKDIQACLLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEE 610
N + TYP L M K Q+ L N+NYR++ AQYA RASVA HT LFF+ K I E
Sbjct: 793 NADSTYPDL-MD---KHKQSALCN---NINYRHKMAQYAQRASVAFHTQLFFKNKGIINE 845
Query: 611 E 611
E
Sbjct: 846 E 846
Score = 110 (43.8 bits), Expect = 1.0e-101, Sum P(3) = 1.0e-101
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR L NGN+EV
Sbjct: 478 PGCTDIDDALHCRELENGNLEV 499
>RGD|1304646 [details] [associations]
symbol:Dis3 "DIS3 mitotic control homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=ISO]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0016075 "rRNA catabolic
process" evidence=ISO] [GO:0071034 "CUT catabolic process"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001900 Pfam:PF00773 InterPro:IPR006596 RGD:1304646
GO:GO:0003723 GO:GO:0004540 SMART:SM00670 IPI:IPI00392641
PRIDE:D3ZAM5 Ensembl:ENSRNOT00000012182 UCSC:RGD:1304646
Uniprot:D3ZAM5
Length = 565
Score = 819 (293.4 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 167/351 (47%), Positives = 226/351 (64%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHL----E 56
++D+ +N + FY F NEHH ETY+EQE GE+ NDRNDRA+R A WY EHL E
Sbjct: 109 IRDVTNNQEKHFYTFTNEHHKETYIEQEQGENANDRNDRAIRVAAKWY---NEHLKMSAE 165
Query: 57 SAVRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDS 115
+ ++VIL++ D +N++ A + G+ + E Y+ +L+ L+D+L+ + + E
Sbjct: 166 NQLQVILITNDKKNKEKAAEEGIPAFTCEEYVKSLTANPELIDRLACLSDEMNEIESGKI 225
Query: 116 LYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGY---DKPILVQGREGLNRA 172
++ H S++ GIK+ S LQG+F+ASREN+LE V G +K IL+QG + LNRA
Sbjct: 226 IFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEDEKEILIQGLKHLNRA 285
Query: 173 IDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKT-VPPAERRPTGQIV 231
I D VAV LLP+SQW AP + KT V RPTG++V
Sbjct: 286 IHEDIVAVELLPKSQWVAPSSVVLHDEGQNEDDVEKDEERELLLKTAVSEKMLRPTGRVV 345
Query: 232 GIIKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWP 291
GIIKR WR YCG+L + + S RHLF PA+++IP+IR+ETRQ + L G+RI+VAID WP
Sbjct: 346 GIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRIIVAIDGWP 405
Query: 292 RHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
R+SRYP GHFV+ LG +G+K+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 406 RNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPW 456
Score = 197 (74.4 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 36/45 (80%), Positives = 39/45 (86%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SITEE++ R DLRHL VCSVDPPGCTDIDDALHCR L NGN+EV
Sbjct: 457 SITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEV 501
Score = 110 (43.8 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR L NGN+EV
Sbjct: 480 PGCTDIDDALHCRELSNGNLEV 501
>UNIPROTKB|F2Z2C0 [details] [associations]
symbol:DIS3 "Exosome complex exonuclease RRP44"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 InterPro:IPR006596 GO:GO:0003723
GO:GO:0004540 EMBL:AL138695 SMART:SM00670 EMBL:AL391384
HGNC:HGNC:20604 ChiTaRS:DIS3 IPI:IPI00978109
ProteinModelPortal:F2Z2C0 SMR:F2Z2C0 PRIDE:F2Z2C0
Ensembl:ENST00000490646 ArrayExpress:F2Z2C0 Bgee:F2Z2C0
Uniprot:F2Z2C0
Length = 559
Score = 815 (292.0 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 163/349 (46%), Positives = 227/349 (65%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHL--ESA 58
++D+ +N + FY F NEHH ETYVEQE GE+ NDRNDRA+R A WY ++ + + ++
Sbjct: 109 IRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQ 168
Query: 59 VRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKDSLY 117
++VI ++ D RN++ A + G+ + E Y+ +L+ L+D+L+ E E ++
Sbjct: 169 LQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIESGKIIF 228
Query: 118 PLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEG---YDKPILVQGREGLNRAID 174
H S++ GIK+ + LQG+F+ASREN+LE V G +K I++QG + LNRA+
Sbjct: 229 SEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWIHGDNEENKEIILQGLKHLNRAVH 288
Query: 175 GDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKT-VPPAERRPTGQIVGI 233
D VAV LLP+SQW AP + + KT V +PTG++VGI
Sbjct: 289 EDIVAVELLPKSQWVAPSSVVLHDEGQNEEDVEKEEETERMLKTAVSEKMLKPTGRVVGI 348
Query: 234 IKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWPRH 293
IKR WR YCG+L + + S RHLF PA+++IP+IR+ETRQ +TL G+RI+VAID WPR+
Sbjct: 349 IKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRN 408
Query: 294 SRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
SRYP GHFVR LG +G+K+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 409 SRYPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPW 457
Score = 192 (72.6 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SITE+++ R DLRHL +CSVDPPGCTDIDDALHCR L NGN+EV
Sbjct: 458 SITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLEV 502
Score = 110 (43.8 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR L NGN+EV
Sbjct: 481 PGCTDIDDALHCRELENGNLEV 502
>UNIPROTKB|F1RHF7 [details] [associations]
symbol:DIS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071034 "CUT catabolic process" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0005654
GO:GO:0003723 GO:GO:0005085 GO:GO:0004519 GO:GO:0016075
GO:GO:0000176 GO:GO:0000175 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 OMA:MPWSITE GO:GO:0071034
EMBL:FP101966 Ensembl:ENSSSCT00000010370 Uniprot:F1RHF7
Length = 752
Score = 593 (213.8 bits), Expect = 6.9e-93, Sum P(3) = 6.9e-93
Identities = 117/231 (50%), Positives = 155/231 (67%)
Query: 116 LYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEG---YDKPILVQGREGLNRA 172
++ H S++ GIK+ + LQG+F+ASREN+LE V G +K I++QG + LNRA
Sbjct: 21 IFSEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWVHGDTEENKEIILQGLKNLNRA 80
Query: 173 IDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKT-VPPAERRPTGQIV 231
+ D VAV LLP++QW AP + + KT V +PTG++V
Sbjct: 81 VHEDIVAVELLPKNQWVAPSSVVLHDEGQNEDDVEKEEERERILKTAVNEKMLKPTGRVV 140
Query: 232 GIIKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWP 291
GIIKR WR YCG+L + + S RHLF PA+++IP+IR+ETRQ +TL G+RI+V+ID WP
Sbjct: 141 GIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRIIVSIDGWP 200
Query: 292 RHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
R+SRYP GHFV+ LG +GDK+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 201 RNSRYPNGHFVKNLGEVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPW 251
Score = 275 (101.9 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 55/78 (70%), Positives = 59/78 (75%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ QAVYF SGM +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD TYP L
Sbjct: 542 MMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELT 599
Query: 462 DKKASTALCYNLVSDFHH 479
DK LC NL +F H
Sbjct: 600 DKHKLADLCKNL--NFRH 615
Score = 246 (91.7 bits), Expect = 6.9e-93, Sum P(3) = 6.9e-93
Identities = 46/63 (73%), Positives = 49/63 (77%)
Query: 470 CYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
C + +DFHHYGLA+PIYTHFTSPIRRYADIIVHRLLA IGAD TYP L DK LC
Sbjct: 549 CSGMDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELTDKHKLADLC 608
Query: 530 YNL 532
NL
Sbjct: 609 KNL 611
Score = 188 (71.2 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SITE+++ R DLRHL VCSVDPPGCTDIDDALHCR L NG++EV
Sbjct: 252 SITEKDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELENGDLEV 296
Score = 119 (46.9 bits), Expect = 6.9e-93, Sum P(3) = 6.9e-93
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L +L NLN+R++ AQYA RASVA HT LFF+ K I EE
Sbjct: 604 LADLCKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEE 643
Score = 105 (42.0 bits), Expect = 4.4e-78, Sum P(3) = 4.4e-78
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR L NG++EV
Sbjct: 275 PGCTDIDDALHCRELENGDLEV 296
>UNIPROTKB|G3V1J5 [details] [associations]
symbol:DIS3 "Exosome complex exonuclease RRP44"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0003723
GO:GO:0004540 EMBL:AL138695 InterPro:IPR022966 PROSITE:PS01175
EMBL:CH471093 EMBL:AL391384 UniGene:Hs.740506 HGNC:HGNC:20604
ChiTaRS:DIS3 ProteinModelPortal:G3V1J5 SMR:G3V1J5
Ensembl:ENST00000545453 ArrayExpress:G3V1J5 Bgee:G3V1J5
Uniprot:G3V1J5
Length = 796
Score = 656 (236.0 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 134/292 (45%), Positives = 187/292 (64%)
Query: 56 ESAVRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLS-KKEAVVETSVKD 114
++ ++VI ++ D RN++ A + G+ + E Y+ +L+ L+D+L+ E E
Sbjct: 4 DNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIESGK 63
Query: 115 SLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEG---YDKPILVQGREGLNR 171
++ H S++ GIK+ + LQG+F+ASREN+LE V G +K I++QG + LNR
Sbjct: 64 IIFSEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWIHGDNEENKEIILQGLKHLNR 123
Query: 172 AIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKT-VPPAERRPTGQI 230
A+ D VAV LLP+SQW AP + + KT V +PTG++
Sbjct: 124 AVHEDIVAVELLPKSQWVAPSSVVLHDEGQNEEDVEKEEETERMLKTAVSEKMLKPTGRV 183
Query: 231 VGIIKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSW 290
VGIIKR WR YCG+L + + S RHLF PA+++IP+IR+ETRQ +TL G+RI+VAID W
Sbjct: 184 VGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGW 243
Query: 291 PRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
PR+SRYP GHFVR LG +G+K+TE EVLLLEHDVPH FS VLS+LP MPW
Sbjct: 244 PRNSRYPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPW 295
Score = 272 (100.8 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 53/78 (67%), Positives = 59/78 (75%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ QAVYF SGM +DFHHYGLA+PIYTHFTSPIRRYAD+IVHRLLA IGAD TYP L
Sbjct: 586 MMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELT 643
Query: 462 DKKASTALCYNLVSDFHH 479
DK +C NL +F H
Sbjct: 644 DKHKLADICKNL--NFRH 659
Score = 243 (90.6 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 44/63 (69%), Positives = 49/63 (77%)
Query: 470 CYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
C + +DFHHYGLA+PIYTHFTSPIRRYAD+IVHRLLA IGAD TYP L DK +C
Sbjct: 593 CSGMDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTDKHKLADIC 652
Query: 530 YNL 532
NL
Sbjct: 653 KNL 655
Score = 192 (72.6 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SITE+++ R DLRHL +CSVDPPGCTDIDDALHCR L NGN+EV
Sbjct: 296 SITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLEV 340
Score = 121 (47.7 bits), Expect = 2.0e-85, Sum P(3) = 2.0e-85
Identities = 29/59 (49%), Positives = 34/59 (57%)
Query: 553 EVTYPSLGMSQSCKDIQACLLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
+ TYP L DI C NLN+R++ AQYA RASVA HT LFF+ K I EE
Sbjct: 636 DCTYPELTDKHKLADI--CK-----NLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEE 687
Score = 110 (43.8 bits), Expect = 2.0e-85, Sum P(3) = 2.0e-85
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALHCR L NGN+EV
Sbjct: 319 PGCTDIDDALHCRELENGNLEV 340
>DICTYBASE|DDB_G0293614 [details] [associations]
symbol:DDB_G0293614 "putative exoribonuclease"
species:44689 "Dictyostelium discoideum" [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000176 "nuclear exosome (RNase complex)" evidence=ISS]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
dictyBase:DDB_G0293614 InterPro:IPR006596 GO:GO:0003723
GO:GO:0004540 EMBL:AAFI02000218 GO:GO:0000176 eggNOG:COG0557
InterPro:IPR022966 PROSITE:PS01175 KO:K12585 OMA:MPWSITE
SMART:SM00670 RefSeq:XP_629050.1 ProteinModelPortal:Q54BH9
STRING:Q54BH9 EnsemblProtists:DDB0234145 GeneID:8629340
KEGG:ddi:DDB_G0293614 InParanoid:Q54BH9 ProtClustDB:CLSZ2429248
Uniprot:Q54BH9
Length = 1006
Score = 626 (225.4 bits), Expect = 4.2e-80, Sum P(2) = 4.2e-80
Identities = 140/355 (39%), Positives = 209/355 (58%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLES-AV 59
++D+I SRKFYV+ NE+ T + +E GES NDRNDRA+R WY + HL ++
Sbjct: 111 IRDVIKESSRKFYVYSNEYSTFTSITRENGESPNDRNDRAIRVATQWY---KSHLHKYSI 167
Query: 60 RVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEP-LLDKLSKKEAVVETSVKDS--- 115
+V+L++ D N A GL +I+ + LS+ P L+DKLS +++ KD+
Sbjct: 168 KVLLITNDKDNLKKAKSLGLDCQTIQDLVFELSDKNPSLVDKLSDPND--DSNEKDNDES 225
Query: 116 ---LYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRA 172
Y H S + GIK L+QG F+ S N+ E V+ +K IL+QG E +NRA
Sbjct: 226 KRFQYQEHKPMSMLTEGIKGGKLIQGIFRTSITNYREATVSNREMEKEILIQGIENINRA 285
Query: 173 IDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPAERRPTGQIVG 232
+DGD VAV L +S+W+ P K + + ++++PTG++VG
Sbjct: 286 VDGDIVAVELFDQSKWNTPSTLIMLENEGVEEDDDSIAK----DSLI--SKKQPTGKVVG 339
Query: 233 IIKRKWRQYCGILQ-----PNPLAGSSRHL----FVPAERKIPKIRVETRQIATLSGQRI 283
IIKR W+ YCG ++ N +S L F+P +++IPKIR+++RQ++ L G+RI
Sbjct: 340 IIKRNWKPYCGAVEFKQDDNNTTTKTSTGLHFLYFMPIDKRIPKIRIKSRQVSNLIGKRI 399
Query: 284 VVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP 338
VVAID W ++S+YP GHFV+ LGP+GDK+TE++VLLL+ D+PH F V+ LP
Sbjct: 400 VVAIDQWDKNSKYPSGHFVKDLGPLGDKETESQVLLLQFDIPHHPFGAAVMKCLP 454
Score = 210 (79.0 bits), Expect = 4.2e-80, Sum P(2) = 4.2e-80
Identities = 47/76 (61%), Positives = 54/76 (71%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSL-LDK 463
A YFSSG L DF+HYGLAT IYTHFTSPIRRY DIIVHRLLA+ IG + SL L+
Sbjct: 755 AKYFSSGSLPYEDFNHYGLATDIYTHFTSPIRRYPDIIVHRLLASAIGIQSV--SLNLEN 812
Query: 464 KASTALCYNLVSDFHH 479
K +AL N ++F H
Sbjct: 813 KTISALTEN--NNFRH 826
Score = 175 (66.7 bits), Expect = 2.1e-76, Sum P(2) = 2.1e-76
Identities = 38/57 (66%), Positives = 43/57 (75%)
Query: 476 DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSL-LDKKASTALCYN 531
DF+HYGLAT IYTHFTSPIRRY DIIVHRLLA+ IG + SL L+ K +AL N
Sbjct: 767 DFNHYGLATDIYTHFTSPIRRYPDIIVHRLLASAIGIQSV--SLNLENKTISALTEN 821
Score = 122 (48.0 bits), Expect = 8.0e-71, Sum P(2) = 8.0e-71
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 607 ITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+T ++ R DLR + SVDPPGCTDIDDALH + L G +EV
Sbjct: 462 VTSADMVGRKDLRKECIFSVDPPGCTDIDDALHIKDLGKGIMEV 505
Score = 92 (37.4 bits), Expect = 4.3e-74, Sum P(3) = 4.3e-74
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 558 SLGMSQSCKDIQACLLELGYNLNYRNRQAQYAGRASVALHTHLFFR-RKSITEEEVAR 614
S+ ++ K I A L E N N+R++ AQYA R S LHT +FF+ RKS+ + + R
Sbjct: 805 SVSLNLENKTISA-LTE---NNNFRHKMAQYASRGSTQLHTLIFFKGRKSVEDAYIIR 858
Score = 80 (33.2 bits), Expect = 4.3e-74, Sum P(3) = 4.3e-74
Identities = 15/22 (68%), Positives = 17/22 (77%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGCTDIDDALH + L G +EV
Sbjct: 484 PGCTDIDDALHIKDLGKGIMEV 505
>POMBASE|SPBC26H8.10 [details] [associations]
symbol:dis3 "3'-5' exoribonuclease subunit Dis3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000176 "nuclear
exosome (RNase complex)" evidence=ISO] [GO:0000177 "cytoplasmic
exosome (RNase complex)" evidence=ISO] [GO:0000465 "exonucleolytic
trimming to generate mature 5'-end of 5.8S rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000467 "exonucleolytic trimming to generate mature 3'-end of
5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008536 "Ran GTPase binding" evidence=IPI] [GO:0032853
"positive regulation of Ran GTPase activity" evidence=IMP]
[GO:0034661 "ncRNA catabolic process" evidence=ISO] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=ISO] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=ISO] [GO:0070651 "nonfunctional rRNA decay" evidence=ISO]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=ISO] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=ISO]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=ISO] InterPro:IPR001900 InterPro:IPR003029
Pfam:PF00773 PROSITE:PS50126 SMART:SM00955 PomBase:SPBC26H8.10
InterPro:IPR006596 GO:GO:0051301 GO:GO:0007067 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0040008 GO:GO:0004521
GO:GO:0071035 GO:GO:0071038 GO:GO:0000176 GO:GO:0000175
GO:GO:0000177 GO:GO:0000467 GO:GO:0070651 GO:GO:0071042
GO:GO:0070478 GO:GO:0070481 eggNOG:COG0557 HOGENOM:HOG000191945
InterPro:IPR022966 PROSITE:PS01175 EMBL:M74094 PIR:A41944
RefSeq:NP_596653.1 ProteinModelPortal:P37202 SMR:P37202
STRING:P37202 PRIDE:P37202 EnsemblFungi:SPBC26H8.10.1
GeneID:2540398 KEGG:spo:SPBC26H8.10 KO:K12585 OMA:MPWSITE
OrthoDB:EOG4VHPFH BRENDA:3.1.13.1 NextBio:20801525 GO:GO:0000465
GO:GO:0032853 SMART:SM00670 Uniprot:P37202
Length = 970
Score = 620 (223.3 bits), Expect = 2.6e-79, Sum P(2) = 2.6e-79
Identities = 140/352 (39%), Positives = 197/352 (55%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLES-AV 59
+K L +++F F NE +T+VE+ ES NDRNDRA+R A+W+ HL S +
Sbjct: 129 MKRLCQEKTKRFTPFSNEFFVDTFVERLDDESANDRNDRAIRNAASWFAS---HLASLGI 185
Query: 60 RVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSK-KEAV-----VETSVK 113
+++LL++D N LA + G+ S+++ Y+ L + E LLD +S +A+ VE+ K
Sbjct: 186 KIVLLTDDRENARLAAEQGIQVSTLKDYVQYLPDSEILLDMVSAIADAIASKEQVESGTK 245
Query: 114 DSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAI 173
+ +Y LH + S + A IKN + +G S N+LEG V GY+KP+LV GRE LNRA+
Sbjct: 246 N-VYELHWSMSRLLACIKNGEVHKGLINISTYNYLEGSVVVPGYNKPVLVSGRENLNRAV 304
Query: 174 DGDTVAVRLLPESQWS--APXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPAERRPTGQIV 231
GD V +++LP+ QW A I + + PT ++V
Sbjct: 305 QGDIVCIQILPQDQWKTEAEEIADDDEDVVVSTAAEPDSARINDLELITKRNAHPTAKVV 364
Query: 232 GIIKRKWRQYCGILQPNPLA---GSSRH--LFVPAERKIPKIRVETRQIATLSGQRIVVA 286
GI+KR WR Y G + +A G S+ L P +R++PKIR TRQ L G+RIVVA
Sbjct: 365 GILKRNWRPYVGHVDNATIAQSKGGSQQTVLLTPMDRRVPKIRFRTRQAPRLVGRRIVVA 424
Query: 287 IDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP 338
ID W SRYP+GHFVR LG + K+ E E LLLE+DV H F VL LP
Sbjct: 425 IDLWDASSRYPEGHFVRDLGEMETKEAETEALLLEYDVQHRPFPKAVLDCLP 476
Score = 207 (77.9 bits), Expect = 2.6e-79, Sum P(2) = 2.6e-79
Identities = 40/78 (51%), Positives = 49/78 (62%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ A YF SG DF HYGLA+PIYTHFTSPIRRYAD++ HR LAA I + PSL
Sbjct: 778 MLSAEYFCSGTFAPPDFRHYGLASPIYTHFTSPIRRYADVLAHRQLAAAIDYETINPSLS 837
Query: 462 DKKASTALCYNLVSDFHH 479
DK +C + ++ H
Sbjct: 838 DKSRLIEICNGI--NYRH 853
Score = 184 (69.8 bits), Expect = 6.8e-77, Sum P(2) = 6.8e-77
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 476 DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
DF HYGLA+PIYTHFTSPIRRYAD++ HR LAA I + PSL DK +C
Sbjct: 793 DFRHYGLASPIYTHFTSPIRRYADVLAHRQLAAAIDYETINPSLSDKSRLIEIC 846
Score = 131 (51.2 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 615 RTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
R D R +CS+DPPGC DIDDALH LPNGN EV
Sbjct: 496 RKDFRDKLICSIDPPGCQDIDDALHACVLPNGNYEV 531
Score = 102 (41.0 bits), Expect = 1.0e-73, Sum P(3) = 1.0e-73
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 510 IGADATYPSLLDKK--ASTALC-YNLPGCTDIDDALHCRPLPNGNIEV 554
+ AD T+P ++K +C + PGC DIDDALH LPNGN EV
Sbjct: 484 VPADKTHPLWKNRKDFRDKLICSIDPPGCQDIDDALHACVLPNGNYEV 531
Score = 70 (29.7 bits), Expect = 1.0e-73, Sum P(3) = 1.0e-73
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 554 VTYPSLGMSQSCKDIQACLLELGYNLNYRNRQAQYAGRASV 594
+ Y ++ S S K + L+E+ +NYR+R AQ AGRAS+
Sbjct: 827 IDYETINPSLSDK---SRLIEICNGINYRHRMAQMAGRASI 864
>ASPGD|ASPL0000011287 [details] [associations]
symbol:AN3657 species:162425 "Emericella nidulans"
[GO:0071028 "nuclear mRNA surveillance" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IEA] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IEA]
[GO:0070651 "nonfunctional rRNA decay" evidence=IEA] [GO:0071038
"nuclear polyadenylation-dependent tRNA catabolic process"
evidence=IEA] [GO:0004521 "endoribonuclease activity" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0000176 "nuclear exosome (RNase
complex)" evidence=IEA] [GO:0000177 "cytoplasmic exosome (RNase
complex)" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 InterPro:IPR006596
GO:GO:0005730 EMBL:BN001302 EMBL:AACD01000061 GO:GO:0004521
GO:GO:0000049 GO:GO:0071039 GO:GO:0071035 GO:GO:0071038
GO:GO:0000467 GO:GO:0070651 eggNOG:COG0557 HOGENOM:HOG000191945
InterPro:IPR022966 PROSITE:PS01175 KO:K12585 OMA:MPWSITE
OrthoDB:EOG4VHPFH SMART:SM00670 GO:GO:0071028 RefSeq:XP_661261.1
ProteinModelPortal:Q5B723 SMR:Q5B723 STRING:Q5B723
EnsemblFungi:CADANIAT00005078 GeneID:2873078 KEGG:ani:AN3657.2
Uniprot:Q5B723
Length = 1015
Score = 387 (141.3 bits), Expect = 3.5e-78, Sum P(4) = 3.5e-78
Identities = 92/272 (33%), Positives = 142/272 (52%)
Query: 4 LISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKY-----EEHLESA 58
LI ++FY+F NE ET+V +E ES+NDRNDRA+R VA WY+ + + E +
Sbjct: 119 LIKTDEKRFYLFFNEFRLETHVRREQDESINDRNDRAVRTVAKWYMDHLRAVTKSKKEKS 178
Query: 59 V-RVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSK-KEAVVETSVKDSL 116
+ ++++++D N A + + S+E Y+S L + + LLD +++ +EA + L
Sbjct: 179 IPAIVVITDDKENLRKAKEESVTALSLENYVSGLEDADRLLDMINESREAREAKEARGEL 238
Query: 117 Y-PLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDG 175
Y P + + S+I G++ +L QG F S N+LEGQV +DKP+++ GR NRAI G
Sbjct: 239 YYPEYYSMSKIMTGLRAGNLHQGVFNVSPYNYLEGQVKVAAFDKPLIIMGRHNSNRAISG 298
Query: 176 DTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTV-PPAERR--------- 225
D V V +LP+ QW +P + N+TV ERR
Sbjct: 299 DVVVVEILPKDQWKSPSTKIVDEEAVTKNDNPEG----EDNETVITEKERRALQEEVRQA 354
Query: 226 ----------PTGQIVGIIKRKWRQYCGILQP 247
PT ++VG++KR WRQY G + P
Sbjct: 355 HGKNHEGRPQPTAKVVGVVKRNWRQYVGTVDP 386
Score = 305 (112.4 bits), Expect = 3.5e-78, Sum P(4) = 3.5e-78
Identities = 60/121 (49%), Positives = 78/121 (64%)
Query: 225 RPTGQIVGIIKRKWRQYCGILQPNPLAGSS-----RHLFV-PAERKIPKIRVETRQIATL 278
+PT ++VG++KR WRQY G + P + +++FV P E+K+PKIRV TRQ L
Sbjct: 364 QPTAKVVGVVKRNWRQYVGTVDPTSTGSQTTGRRQQNVFVLPMEKKVPKIRVRTRQATEL 423
Query: 279 SGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP 338
GQRI+V ID+W R SRYP GHF+R+LG + K E E LLLE DV + F VL LP
Sbjct: 424 LGQRILVTIDAWNRDSRYPTGHFIRSLGELETKSAETEALLLEWDVQYKPFPKAVLECLP 483
Query: 339 P 339
P
Sbjct: 484 P 484
Score = 186 (70.5 bits), Expect = 3.5e-78, Sum P(4) = 3.5e-78
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACI---GAD--ATYPS 459
A YF +G +S+F HYGLA+PIYTHFTSPIRRYAD++VHR LAA I G D AT
Sbjct: 790 AEYFCAGAHAESEFRHYGLASPIYTHFTSPIRRYADLLVHRQLAAAINYEGEDGRATIEG 849
Query: 460 LLDKKASTALCYNLVSDFHH 479
+ + +C N+ ++ H
Sbjct: 850 SITRNRLEDICRNI--NYRH 867
Score = 167 (63.8 bits), Expect = 3.4e-76, Sum P(4) = 3.4e-76
Identities = 35/63 (55%), Positives = 43/63 (68%)
Query: 475 SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACI---GAD--ATYPSLLDKKASTALC 529
S+F HYGLA+PIYTHFTSPIRRYAD++VHR LAA I G D AT + + +C
Sbjct: 801 SEFRHYGLASPIYTHFTSPIRRYADLLVHRQLAAAINYEGEDGRATIEGSITRNRLEDIC 860
Query: 530 YNL 532
N+
Sbjct: 861 RNI 863
Score = 151 (58.2 bits), Expect = 2.8e-71, Sum P(3) = 2.8e-71
Identities = 27/36 (75%), Positives = 29/36 (80%)
Query: 615 RTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
R DLR L +CS+DPPGC DIDDALH R LPNGN EV
Sbjct: 503 RRDLRDLLICSIDPPGCQDIDDALHARKLPNGNFEV 538
Score = 103 (41.3 bits), Expect = 1.6e-69, Sum P(4) = 1.6e-69
Identities = 23/42 (54%), Positives = 24/42 (57%)
Query: 533 PGCTDIDDALHCRPLPNGNIEVTYPSLGMSQSCKDIQACLLE 574
PGC DIDDALH R LPNGN EV +S K A LE
Sbjct: 517 PGCQDIDDALHARKLPNGNFEVGVHIADVSHFVKPNNAMDLE 558
Score = 70 (29.7 bits), Expect = 3.5e-78, Sum P(4) = 3.5e-78
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 578 NLNYRNRQAQYAGRASVALHTHLFFRRKS 606
N+NYR+R AQ+AGRAS+ + + +S
Sbjct: 862 NINYRHRNAQHAGRASIEYYVGQALKARS 890
Score = 54 (24.1 bits), Expect = 2.0e-64, Sum P(4) = 2.0e-64
Identities = 26/87 (29%), Positives = 37/87 (42%)
Query: 460 LLDKKASTALCYN-LVSDF--H-HYGLATPIYTHF--TSPIRRYADIIVHRLLAACIGAD 513
L D K L N LV +F H + +A IY+ F T+ +RR+A
Sbjct: 686 LADVKTKAMLATNSLVEEFMLHANITVAAKIYSTFPQTAMLRRHATPPPQNFEELINQLT 745
Query: 514 ATYPSLLDKKASTALCYNLPGCTDIDD 540
LD +S AL +L CTD ++
Sbjct: 746 KKRDMRLDVSSSRALADSLDRCTDAEN 772
>WB|WBGene00001001 [details] [associations]
symbol:dis-3 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
InterPro:IPR006596 GO:GO:0005737 GO:GO:0040010 GO:GO:0005730
GO:GO:0040018 GO:GO:0000003 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 GO:GO:0000178 GO:GO:0004540 GO:GO:0006364
eggNOG:COG0557 HOGENOM:HOG000191945 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 KO:K12585 OMA:MPWSITE
SMART:SM00670 EMBL:Z70718 PIR:T18925 RefSeq:NP_501835.2
ProteinModelPortal:Q17632 SMR:Q17632 STRING:Q17632 PaxDb:Q17632
EnsemblMetazoa:C04G2.6 GeneID:177875 KEGG:cel:CELE_C04G2.6
UCSC:C04G2.6 CTD:177875 WormBase:C04G2.6 InParanoid:Q17632
NextBio:898756 Uniprot:Q17632
Length = 961
Score = 571 (206.1 bits), Expect = 3.3e-75, Sum P(2) = 3.3e-75
Identities = 135/346 (39%), Positives = 199/346 (57%)
Query: 11 KFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVK--YEEHLESAVRVILLSEDV 68
+F+VF+NE H ET+ E E ++ R + L A Y+K +++H + V V++ ED
Sbjct: 129 RFHVFMNEFHCETFSESSKFEDLS-RGEELLLSTAL-YLKTHWQKHNVAPV-VLVFDEDS 185
Query: 69 RNRDLATQSGLLTSSIEGYISTLSN-G-EPLLDKLSKKEAVVETSVKDSLYPLHATPSEI 126
+ R ++ ++ YI L + G + LLD+++ E+ + K ++ + + I
Sbjct: 186 KKRMENHYQHVMY--LKEYIQNLEDPGKQALLDQMAAYESSGNGNEKQ-IFDEYLSHDRI 242
Query: 127 HAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDGDTVAVRLLPES 186
GI + ++ +G+F SREN+ E V + + G NRA++GDTVAV+LLPE
Sbjct: 243 MEGIASGTIKRGNFSVSRENYREATVIIDDQLTSWFITGNN-CNRAVNGDTVAVQLLPED 301
Query: 187 QWSAPXXXXXXXXXXXXXXXXXXX----KLIKGNKTVPPAERRP-----TGQIVGIIKRK 237
QW+AP + P A++ T ++VGIIKR
Sbjct: 302 QWTAPEKKIRLRDVEEYVKTADDMGNEDEENDDENDEPKAKKSKKMTVSTAKVVGIIKRN 361
Query: 238 WRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWPRHSRYP 297
WR+YCG+L P+ + G+ RHLF PAER IP+IR+ET Q TLS QRIVVAID WPR S+YP
Sbjct: 362 WREYCGMLLPSTVKGARRHLFCPAERLIPRIRIETEQAETLSQQRIVVAIDHWPRDSKYP 421
Query: 298 QGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPWE 343
GH+VR++G +G ++TENEVLLLEHD+PH+ FS+ VL LP WE
Sbjct: 422 LGHYVRSIGEMGSRETENEVLLLEHDIPHAPFSESVLDCLPREEWE 467
Score = 220 (82.5 bits), Expect = 3.3e-75, Sum P(2) = 3.3e-75
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 404 QAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK 463
QAVYFS+G + + H+GLA IYTHFTSPIRRYAD+IVHRLLAA IGAD LL++
Sbjct: 762 QAVYFSAGTVPVPQYQHFGLACAIYTHFTSPIRRYADVIVHRLLAAAIGADDIQSGLLNQ 821
Query: 464 KASTALCYNLVSDFHH 479
T +C N+ ++ H
Sbjct: 822 ARCTKICTNI--NYRH 835
Score = 189 (71.6 bits), Expect = 6.1e-72, Sum P(2) = 6.1e-72
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 474 VSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNL 532
V + H+GLA IYTHFTSPIRRYAD+IVHRLLAA IGAD LL++ T +C N+
Sbjct: 773 VPQYQHFGLACAIYTHFTSPIRRYADVIVHRLLAAAIGADDIQSGLLNQARCTKICTNI 831
Score = 125 (49.1 bits), Expect = 3.4e-65, Sum P(2) = 3.4e-65
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 615 RTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
R DLR L +CSVDP GCTDIDDALHC+ + EV
Sbjct: 479 RVDLRDLTICSVDPLGCTDIDDALHCKQIGEDLFEV 514
Score = 93 (37.8 bits), Expect = 1.8e-67, Sum P(3) = 1.8e-67
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 569 QACLLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEE 610
QA ++ N+NYR++QAQYAGRASV L+ +F+ K T E
Sbjct: 821 QARCTKICTNINYRHKQAQYAGRASVQLNVVRYFKGKVETCE 862
Score = 73 (30.8 bits), Expect = 1.8e-67, Sum P(3) = 1.8e-67
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 534 GCTDIDDALHCRPLPNGNIEV 554
GCTDIDDALHC+ + EV
Sbjct: 494 GCTDIDDALHCKQIGEDLFEV 514
>UNIPROTKB|G4NDV8 [details] [associations]
symbol:MGG_00193 "Mitotic control protein dis3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001900 InterPro:IPR003029 Pfam:PF00773
PROSITE:PS50126 SMART:SM00955 InterPro:IPR006596 GO:GO:0005730
EMBL:CM001235 GO:GO:0004521 GO:GO:0000049 GO:GO:0071039
GO:GO:0071035 GO:GO:0071038 GO:GO:0000176 GO:GO:0000175
GO:GO:0000177 GO:GO:0000467 GO:GO:0070651 InterPro:IPR022967
SMART:SM00316 InterPro:IPR022966 PROSITE:PS01175 KO:K12585
SMART:SM00670 GO:GO:0071028 RefSeq:XP_003718924.1
ProteinModelPortal:G4NDV8 SMR:G4NDV8 EnsemblFungi:MGG_00193T0
GeneID:2674544 KEGG:mgr:MGG_00193 Uniprot:G4NDV8
Length = 990
Score = 360 (131.8 bits), Expect = 1.0e-74, Sum P(4) = 1.0e-74
Identities = 78/198 (39%), Positives = 116/198 (58%)
Query: 4 LISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWY--------VKYEEHL 55
L + ++FYVF NE ET+V + ES+NDRNDRA+RR A WY K ++
Sbjct: 134 LTKSDEKRFYVFFNEFRLETHVSRGQDESINDRNDRAVRRAAKWYSEHLAGGSAKSKKKG 193
Query: 56 ESAVRVILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDS 115
++ V++LS D N A + G+ S+ Y+S L + E L+D + + + TSVK S
Sbjct: 194 QNLPAVVMLSNDRANLRKAKEEGIPACSLAQYVSGLKDSERLMDLVPESQDDEITSVKSS 253
Query: 116 --LYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAI 173
+YP + T S++ G+K+ L QG F S N+LEG + ++K +L+ GRE +NRAI
Sbjct: 254 GHVYPEYFTMSKMMTGVKSGLLHQGIFNVSPYNYLEGTIRVPAFEKALLILGRENINRAI 313
Query: 174 DGDTVAVRLLPESQWSAP 191
DGD+V V +LP+ QW P
Sbjct: 314 DGDSVVVEVLPKDQWKVP 331
Score = 287 (106.1 bits), Expect = 1.0e-74, Sum P(4) = 1.0e-74
Identities = 58/124 (46%), Positives = 82/124 (66%)
Query: 222 AERRPTGQIVGIIKRKWRQYCGILQPNPLAGSSRH------LF-VPAERKIPKIRVETRQ 274
A+ +PT ++VG+IKR WRQY G + + ++ S+ +F +P ++KIPKIR+ TRQ
Sbjct: 380 AQAQPTAKVVGVIKRNWRQYVGHIDQSSVSKSATQGRKQEVVFLIPMDKKIPKIRLRTRQ 439
Query: 275 IATLSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVL 334
+ L G+RI+V ID+W R SR+P GHFVR+LG + K E E LLLE+DV + F VL
Sbjct: 440 VGELLGKRILVTIDAWDRDSRHPVGHFVRSLGELETKAAETEALLLEYDVQYRPFPKTVL 499
Query: 335 SYLP 338
LP
Sbjct: 500 DCLP 503
Score = 204 (76.9 bits), Expect = 1.0e-74, Sum P(4) = 1.0e-74
Identities = 38/72 (52%), Positives = 49/72 (68%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ A YF SG +F HYGLA+ IYTHFTSPIRRYAD++ HR LAA IG +A +PS+
Sbjct: 805 MMSAEYFCSGTQAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAVHPSVR 864
Query: 462 DKKASTALCYNL 473
+ A+C N+
Sbjct: 865 SRGRLEAVCRNI 876
Score = 184 (69.8 bits), Expect = 1.2e-72, Sum P(4) = 1.2e-72
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 476 DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNL 532
+F HYGLA+ IYTHFTSPIRRYAD++ HR LAA IG +A +PS+ + A+C N+
Sbjct: 820 EFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAVHPSVRSRGRLEAVCRNI 876
Score = 149 (57.5 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 40/95 (42%), Positives = 52/95 (54%)
Query: 558 SLG-MSQSCKDIQACLLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEEVAR-R 615
SLG + + +A LLE Y++ YR H ++ + T++ R R
Sbjct: 469 SLGELETKAAETEALLLE--YDVQYRPFPKTVLDCLPKEGHD---WKVPASTDDPGWRDR 523
Query: 616 TDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
DLR L +CS+DP GC DIDDALH RPLPNGN EV
Sbjct: 524 EDLRGLLICSIDPIGCQDIDDALHARPLPNGNFEV 558
Score = 102 (41.0 bits), Expect = 4.3e-64, Sum P(4) = 4.3e-64
Identities = 18/21 (85%), Positives = 18/21 (85%)
Query: 534 GCTDIDDALHCRPLPNGNIEV 554
GC DIDDALH RPLPNGN EV
Sbjct: 538 GCQDIDDALHARPLPNGNFEV 558
Score = 69 (29.3 bits), Expect = 1.0e-74, Sum P(4) = 1.0e-74
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 578 NLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
N+N R+R AQ AGRASVA + + K + EE+
Sbjct: 875 NINVRHRNAQLAGRASVAYYVGQSLKGK-VAEED 907
Score = 39 (18.8 bits), Expect = 3.4e-40, Sum P(4) = 3.4e-40
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 53 EHLESAVRVILLS---EDVRNRDLATQSGL--LTSSIE 85
E +S VI+L E+VRNR L + L LT S E
Sbjct: 102 EQSDSFCDVIVLQIVLEEVRNRSLPLYNRLIGLTKSDE 139
>SGD|S000005381 [details] [associations]
symbol:DIS3 "Exosome core complex catalytic subunit"
species:4932 "Saccharomyces cerevisiae" [GO:0000467 "exonucleolytic
trimming to generate mature 3'-end of 5.8S rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IC] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IDA] [GO:0000177 "cytoplasmic exosome (RNase complex)"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IMP;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0071028 "nuclear mRNA surveillance" evidence=IMP]
[GO:0070651 "nonfunctional rRNA decay" evidence=IMP] [GO:0004521
"endoribonuclease activity" evidence=IMP;IDA] [GO:0000178 "exosome
(RNase complex)" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016075 "rRNA
catabolic process" evidence=IMP] [GO:0071035 "nuclear
polyadenylation-dependent rRNA catabolic process" evidence=IMP]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IGI;IMP;IDA] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IMP]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0000049 "tRNA
binding" evidence=IDA;IMP] [GO:0070481 "nuclear-transcribed mRNA
catabolic process, non-stop decay" evidence=IC] [GO:0043628 "ncRNA
3'-end processing" evidence=IMP] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IC]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IC]
InterPro:IPR001900 InterPro:IPR003029 Pfam:PF00773 PROSITE:PS50126
SMART:SM00955 SGD:S000005381 InterPro:IPR006596 GO:GO:0005739
GO:GO:0005730 EMBL:BK006948 GO:GO:0004521 GO:GO:0000049
GO:GO:0071039 GO:GO:0071035 GO:GO:0071038 GO:GO:0000176
GO:GO:0000175 GO:GO:0000177 GO:GO:0000467 GO:GO:0070651
GO:GO:0071042 GO:GO:0070478 GO:GO:0070481 InterPro:IPR022967
SMART:SM00316 GO:GO:0071051 eggNOG:COG0557 HOGENOM:HOG000191945
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
KO:K12585 OMA:MPWSITE OrthoDB:EOG4VHPFH SMART:SM00670 GO:GO:0071028
PDB:2WP8 PDBsum:2WP8 EMBL:D76430 EMBL:Z74763 PIR:S66704
RefSeq:NP_014621.1 PDB:2VNU PDBsum:2VNU ProteinModelPortal:Q08162
SMR:Q08162 DIP:DIP-2355N IntAct:Q08162 MINT:MINT-614156
STRING:Q08162 PaxDb:Q08162 PeptideAtlas:Q08162 EnsemblFungi:YOL021C
GeneID:854138 KEGG:sce:YOL021C CYGD:YOL021c
EvolutionaryTrace:Q08162 NextBio:975871 Genevestigator:Q08162
GermOnline:YOL021C Uniprot:Q08162
Length = 1001
Score = 359 (131.4 bits), Expect = 4.4e-70, Sum P(4) = 4.4e-70
Identities = 74/194 (38%), Positives = 118/194 (60%)
Query: 6 SNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESA-VRVILL 64
S+ ++F VF NE T+VE+ P E++NDRNDRA+R+ WY EHL+ + V+L+
Sbjct: 139 SDDHKRFIVFHNEFSEHTFVERLPNETINDRNDRAIRKTCQWY---SEHLKPYDINVVLV 195
Query: 65 SEDVRNRDLAT---QSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDSL----Y 117
+ D NR+ AT +S ++T S+ YI L N + + D + + ++ + +D+ +
Sbjct: 196 TNDRLNREAATKEVESNIITKSLVQYIELLPNADDIRDSIPQMDSFDKDLERDTFSDFTF 255
Query: 118 PLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDGDT 177
P + + + + G+KN L QG+ Q S NFLEG V+ + KP+L+ G++ LNRA +GD
Sbjct: 256 PEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGDQ 315
Query: 178 VAVRLLPESQWSAP 191
V V LLP+S+W AP
Sbjct: 316 VIVELLPQSEWKAP 329
Score = 270 (100.1 bits), Expect = 4.4e-70, Sum P(4) = 4.4e-70
Identities = 57/118 (48%), Positives = 76/118 (64%)
Query: 225 RPTGQIVGIIKRKWRQYCGILQPN---PLAGSSRHLFVPAERK-IPKIRVETRQIATLSG 280
+PT ++V I +R WRQY G L P+ P + S++++FV K +PK+R+ TR+ A L
Sbjct: 387 QPTAKVVYIQRRSWRQYVGQLAPSSVDPQSSSTQNVFVILMDKCLPKVRIRTRRAAELLD 446
Query: 281 QRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP 338
+RIV++IDSWP +YP GHFVR LG I E E LLLEHDV + FS VL LP
Sbjct: 447 KRIVISIDSWPTTHKYPLGHFVRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLP 504
Score = 181 (68.8 bits), Expect = 4.4e-70, Sum P(4) = 4.4e-70
Identities = 35/72 (48%), Positives = 42/72 (58%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ A YF SG DF HYGLA IYTHFTSPIRRY D++ HR LA IG + +
Sbjct: 813 MMAAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHR 872
Query: 462 DKKASTALCYNL 473
DK +C N+
Sbjct: 873 DKNKMDMICRNI 884
Score = 161 (61.7 bits), Expect = 5.4e-68, Sum P(4) = 5.4e-68
Identities = 30/57 (52%), Positives = 36/57 (63%)
Query: 476 DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNL 532
DF HYGLA IYTHFTSPIRRY D++ HR LA IG + + DK +C N+
Sbjct: 828 DFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNKMDMICRNI 884
Score = 143 (55.4 bits), Expect = 2.1e-63, Sum P(3) = 2.1e-63
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 612 VARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+ +R DLR +CS+DPPGC DIDDALH + LPNGN EV
Sbjct: 528 LTKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGNWEV 566
Score = 96 (38.9 bits), Expect = 3.2e-61, Sum P(4) = 3.2e-61
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
PGC DIDDALH + LPNGN EV
Sbjct: 545 PGCVDIDDALHAKKLPNGNWEV 566
Score = 66 (28.3 bits), Expect = 4.4e-70, Sum P(4) = 4.4e-70
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 578 NLNYRNRQAQYAGRASVALHTHLFFRRKSITE 609
N+N ++R AQ+AGRAS+ + R TE
Sbjct: 883 NINRKHRNAQFAGRASIEYYVGQVMRNNESTE 914
>CGD|CAL0003527 [details] [associations]
symbol:orf19.5229 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000176 "nuclear exosome (RNase
complex)" evidence=IEA] [GO:0000177 "cytoplasmic exosome (RNase
complex)" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=IEA] [GO:0071028 "nuclear mRNA surveillance"
evidence=IEA] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0071035 "nuclear
polyadenylation-dependent rRNA catabolic process" evidence=IEA]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IEA] [GO:0070651 "nonfunctional rRNA decay"
evidence=IEA] [GO:0071038 "nuclear polyadenylation-dependent tRNA
catabolic process" evidence=IEA] InterPro:IPR001900
InterPro:IPR003029 Pfam:PF00773 PROSITE:PS50126 SMART:SM00955
CGD:CAL0003527 InterPro:IPR006596 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 KO:K12585 SMART:SM00670 EMBL:AACQ01000070
EMBL:AACQ01000071 RefSeq:XP_716298.1 RefSeq:XP_716360.1
ProteinModelPortal:Q5A3P1 SMR:Q5A3P1 STRING:Q5A3P1 GeneID:3641956
GeneID:3642063 KEGG:cal:CaO19.12694 KEGG:cal:CaO19.5229
Uniprot:Q5A3P1
Length = 1004
Score = 351 (128.6 bits), Expect = 1.6e-66, Sum P(3) = 1.6e-66
Identities = 71/202 (35%), Positives = 121/202 (59%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + ++F VF NE++ +TY+ + E++NDRNDRA+R+VA WY + HL S ++
Sbjct: 131 LRNLVKSEDKRFIVFHNEYNEQTYINRNKNETINDRNDRAIRKVAQWY---QTHLPSKIK 187
Query: 61 VILLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVE-----TSV--- 112
+ D NR+ A + G+ S+ YI +L N + L D + + ++ E T+
Sbjct: 188 TFFICNDKDNRNKAIKEGIDARSLVEYIESLPNADDLSDLIPQDDSTFENDKNSTTATAG 247
Query: 113 ---KDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGL 169
+++ +P + + + I AGIKN +L QG S N+L+G+V+ + KP+L+QG + L
Sbjct: 248 SDDEETSFPEYYSNARIMAGIKNGTLYQGILNVSSYNYLQGEVSVPAFKKPLLIQGSKNL 307
Query: 170 NRAIDGDTVAVRLLPESQWSAP 191
NRA + D+V V LLP+ +W P
Sbjct: 308 NRAFNSDSVIVELLPKDKWKEP 329
Score = 285 (105.4 bits), Expect = 1.6e-66, Sum P(3) = 1.6e-66
Identities = 61/121 (50%), Positives = 78/121 (64%)
Query: 225 RPTGQIVGIIKRKWRQYCGILQPNPL-----AG-SSRHLFVPA-ERKIPKIRVETRQIAT 277
+PT +IVG+++R WR Y G + P+ + G +SR FV + K+PKIR+ TR+
Sbjct: 392 QPTAKIVGVMRRSWRYYVGQIAPSSVNLDDKTGHASRSCFVILMDPKLPKIRIRTRKARE 451
Query: 278 LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYL 337
GQRIVV +DSWP +SRYP GHFVRALG I + E E LLLEHDV + FS VL L
Sbjct: 452 YLGQRIVVVVDSWPINSRYPNGHFVRALGEIESAEAETEALLLEHDVEYRPFSKNVLDCL 511
Query: 338 P 338
P
Sbjct: 512 P 512
Score = 167 (63.8 bits), Expect = 1.6e-66, Sum P(3) = 1.6e-66
Identities = 34/72 (47%), Positives = 41/72 (56%)
Query: 402 LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLL 461
+ A YF SG +F HYGLA IYTHFTSPIRRY D++ HR LA IG + S
Sbjct: 818 MMAAEYFPSGSYGYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHR 877
Query: 462 DKKASTALCYNL 473
DK + N+
Sbjct: 878 DKSKMEMIVRNI 889
Score = 148 (57.2 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 29/57 (50%), Positives = 35/57 (61%)
Query: 476 DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNL 532
+F HYGLA IYTHFTSPIRRY D++ HR LA IG + S DK + N+
Sbjct: 833 EFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKSKMEMIVRNI 889
Score = 145 (56.1 bits), Expect = 3.2e-64, Sum P(3) = 3.2e-64
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 608 TEE-EVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
TE+ ++ +R DLR VCS+DPP C DIDDALH + LPNGN EV
Sbjct: 527 TEDPQLQKRVDLRDKLVCSIDPPNCVDIDDALHAKQLPNGNYEV 570
Score = 92 (37.4 bits), Expect = 4.7e-61, Sum P(4) = 4.7e-61
Identities = 16/22 (72%), Positives = 17/22 (77%)
Query: 533 PGCTDIDDALHCRPLPNGNIEV 554
P C DIDDALH + LPNGN EV
Sbjct: 549 PNCVDIDDALHAKQLPNGNYEV 570
Score = 63 (27.2 bits), Expect = 4.7e-61, Sum P(4) = 4.7e-61
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 554 VTYPSLGMSQSCKDIQACLLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEE 610
+ Y +L +S K ++ N+N R+R AQ+AGR+S+ + R E
Sbjct: 867 IGYENLDLSHRDKSKMEMIVR---NINKRHRNAQFAGRSSIEYYVGQVMRNNESEHE 920
>UNIPROTKB|F1NKN5 [details] [associations]
symbol:LOC100857630 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016075 "rRNA catabolic process" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177
InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:AADN02038918 EMBL:AADN02038919
EMBL:AADN02038920 IPI:IPI00571818 Ensembl:ENSGALT00000012364
Uniprot:F1NKN5
Length = 1082
Score = 392 (143.0 bits), Expect = 6.2e-49, Sum P(3) = 6.2e-49
Identities = 114/374 (30%), Positives = 174/374 (46%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++LI + VF NE H +Y +E GES+ R++ A WY Y H +
Sbjct: 128 LRNLIKDARHDCTVFANEFHQNSYQPREKGESMEKWQTRSIYNAAVWY--YN-HCLGQMP 184
Query: 61 VILLSED---VRNRDLATQSGLLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS 111
V++++ED +R T G+ S + Y+ L L D + +++E +E+
Sbjct: 185 VVMVTEDEDAIRQYGNET-GGVFVISFKNYLDNFWPDLKAAHELFDSILQARREREIESQ 243
Query: 112 VKDSL-YPLHATPSEIHAGIKNQSLLQGSFQASRENF-LEGQVNCEGY-------DKPIL 162
+ YP H + AGIK+ +QG+ ++ LE V +G+ IL
Sbjct: 244 ENNGKEYPEHLPMEVLEAGIKSGRYIQGALNVNKHRAQLEAFVRLQGFGSKETELQSDIL 303
Query: 163 VQGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPA 222
+ G + NRAI GD VAV LLP +W + T P
Sbjct: 304 IYGAKARNRAIHGDVVAVELLPSHEWKGRTVALCENETEDKA---------PADTTGDPM 354
Query: 223 ERRPTGQIVGIIKRKWRQYCGILQPN--PLAGSSRH----LFVPAERKIPKIRVETRQIA 276
PTG++VGII++ WR Y + P+ R+ L P + +IPKIR+ T+Q
Sbjct: 355 ---PTGKVVGIIQKNWRDYV-VTFPSREECQSQGRNAQKILVTPWDYRIPKIRISTQQAE 410
Query: 277 TLSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSY 336
L R+VV IDSW S YP GHFVR LG IGD + E +L+E+ + + FS++ ++
Sbjct: 411 ALQEYRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIAAILVENSITVAPFSEIQMNE 470
Query: 337 LPPMPWEKSTGRPW 350
+P S+ PW
Sbjct: 471 MPV----SSSKNPW 480
Score = 178 (67.7 bits), Expect = 6.2e-49, Sum P(3) = 6.2e-49
Identities = 33/45 (73%), Positives = 37/45 (82%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAA 449
A+YFS+G + +FHHYGLA YTHFTSPIRRYADIIVHRLL A
Sbjct: 794 ALYFSTGSCSEEEFHHYGLALDKYTHFTSPIRRYADIIVHRLLMA 838
Score = 154 (59.3 bits), Expect = 2.0e-46, Sum P(3) = 2.0e-46
Identities = 38/69 (55%), Positives = 44/69 (63%)
Query: 440 DIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHYGLATPIYTHFTSPIRRYAD 499
D IV++LL + + A +L ST C +FHHYGLA YTHFTSPIRRYAD
Sbjct: 776 DPIVNKLLRS-MATQAMSNALY---FSTGSCSE--EEFHHYGLALDKYTHFTSPIRRYAD 829
Query: 500 IIVHRLLAA 508
IIVHRLL A
Sbjct: 830 IIVHRLLMA 838
Score = 119 (46.9 bits), Expect = 8.3e-41, Sum P(2) = 8.3e-41
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+ EE +R +LR HL + S+DP GC D+DDAL R LPNGN+E+
Sbjct: 482 VNPEEEKKRLNLRDTHL-IFSIDPKGCEDVDDALSVRTLPNGNLEL 526
Score = 83 (34.3 bits), Expect = 4.9e-39, Sum P(3) = 4.9e-39
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 526 TALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
T L +++ P GC D+DDAL R LPNGN+E+
Sbjct: 496 THLIFSIDPKGCEDVDDALSVRTLPNGNLEL 526
Score = 60 (26.2 bits), Expect = 6.2e-49, Sum P(3) = 6.2e-49
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 578 NLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
++N RNR AQ+A + S L ++F+ KS +E
Sbjct: 863 HINNRNRAAQHAQKQSTELFQCMYFKDKSPETDE 896
>ZFIN|ZDB-GENE-070209-95 [details] [associations]
symbol:dis3l "DIS3 mitotic control homolog (S.
cerevisiae)-like" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase complex)"
evidence=ISS] [GO:0000178 "exosome (RNase complex)" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
ZFIN:ZDB-GENE-070209-95 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:CABZ01003662 IPI:IPI00493157
ProteinModelPortal:F1Q9I9 Ensembl:ENSDART00000075176 Bgee:F1Q9I9
Uniprot:F1Q9I9
Length = 1057
Score = 382 (139.5 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 108/367 (29%), Positives = 172/367 (46%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L+ L+ +P +F NE +Y +E GES + + R + A WY Y HL
Sbjct: 100 LRSLLKDPRHDCVLFANEFQQYSYCPREKGESQDKWHTRNVYNAAVWY--YN-HLAGLQP 156
Query: 61 VILLSED--VRNRDLATQSGLLTSSIEGYI----STLSNGEPLLDKLSKKEAVVETSVKD 114
V++++ED + A+ SG+ S + Y+ L L +++ E +
Sbjct: 157 VVMITEDRDAISEFSASNSGVFVISTQEYLLGFWPDLQAAHDLYHSIAQTLQERENDGAE 216
Query: 115 SLYPLHATPSEIHAGIKNQSLLQG-----SFQASRENFL--EGQV--NCEGYDKPILVQG 165
+Y H + AGIK+ +QG +A E F+ EG N E + +L+ G
Sbjct: 217 KVYTEHLPAEVLEAGIKSGMYIQGILSVNKHRAQHEAFVRYEGSASKNTE-LNSDVLING 275
Query: 166 REGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPAERR 225
+ NRA+ GD V + L P ++W + ++ ++ P
Sbjct: 276 AKHRNRAVHGDVVVIELFPRNEWKG--------RTMALTEGQGEERPLEDTQSQP----M 323
Query: 226 PTGQIVGIIKRKWRQYCGILQP-NPLAGSSRH----LFVPAERKIPKIRVETRQIATLSG 280
PTG++VGI++R WR Y L P + SR+ L VP + +IPKIR+ T+Q L
Sbjct: 324 PTGRVVGILQRNWRDYVVTLPPFEEMQSQSRNSQKILVVPWDYRIPKIRISTQQAEALQD 383
Query: 281 QRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP-- 338
QR++V +DSW S YP GHFVR LG G+ +TE + +L+E+ + FS+ L +P
Sbjct: 384 QRVIVRLDSWESTSVYPNGHFVRVLGKSGELETEIQTILVENCIHVPPFSEAQLREMPVN 443
Query: 339 --PMPWE 343
PW+
Sbjct: 444 TEENPWQ 450
Score = 168 (64.2 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACI 451
A+YFS+G + ++HYGLA YTHFTSPIRRYAD+IVHRLL A +
Sbjct: 761 ALYFSTGSCPEEQYYHYGLALARYTHFTSPIRRYADVIVHRLLMAAV 807
Score = 144 (55.7 bits), Expect = 6.2e-45, Sum P(3) = 6.2e-45
Identities = 39/106 (36%), Positives = 54/106 (50%)
Query: 408 FSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADI---IVHRLLAACIGADATYPSLLDKK 464
F + ++ + H + + T + R D +V+RLL + A +L
Sbjct: 708 FFNHLIDSAKAHGFSIDTRSNRALADSLERAVDPRDPLVNRLLRM-MATQAMSNALY--- 763
Query: 465 ASTALCYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACI 510
ST C ++HYGLA YTHFTSPIRRYAD+IVHRLL A +
Sbjct: 764 FSTGSCPE--EQYYHYGLALARYTHFTSPIRRYADVIVHRLLMAAV 807
Score = 93 (37.8 bits), Expect = 6.2e-37, Sum P(2) = 6.2e-37
Identities = 21/38 (55%), Positives = 24/38 (63%)
Query: 611 EVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNG 646
EV+ R DLR HL V S+DP GC D+DD L R P G
Sbjct: 455 EVSSRRDLRDSHL-VFSIDPKGCEDVDDTLSVRTQPGG 491
Score = 67 (28.6 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRK-SITEE 610
L EL ++N +NR AQ++ + S+ L ++FR K S T+E
Sbjct: 825 LEELAQHINNKNRAAQHSQKQSIELFQCMYFRDKDSHTDE 864
Score = 52 (23.4 bits), Expect = 2.3e-35, Sum P(3) = 2.3e-35
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 534 GCTDIDDALHCRPLPNG 550
GC D+DD L R P G
Sbjct: 475 GCEDVDDTLSVRTQPGG 491
>UNIPROTKB|A0JN80 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9913 "Bos
taurus" [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0000175
GO:GO:0000177 EMBL:BC126555 IPI:IPI00701147 RefSeq:NP_001071624.1
UniGene:Bt.10856 ProteinModelPortal:A0JN80 STRING:A0JN80
PRIDE:A0JN80 GeneID:777771 KEGG:bta:777771 CTD:115752
eggNOG:COG0557 HOGENOM:HOG000191945 HOVERGEN:HBG059397
InParanoid:A0JN80 OrthoDB:EOG4229HZ NextBio:20924325
InterPro:IPR022966 PROSITE:PS01175 Uniprot:A0JN80
Length = 1053
Score = 371 (135.7 bits), Expect = 5.6e-47, Sum P(4) = 5.6e-47
Identities = 106/372 (28%), Positives = 176/372 (47%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + +F NE Y+ +E GES+ R++ A WY Y H + +
Sbjct: 103 LRNLLKDARHDCVLFANEFQQSCYLPRERGESMEKWQSRSIYNAAAWY--YH-HCQDRMP 159
Query: 61 VILLSEDVRN-RDLATQSG-LLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSV 112
+++++ED + +++G + S + Y+ L L + + S++E E+
Sbjct: 160 IVMVTEDEEAIQQYGSETGGVFVISFKNYLDNFWPDLKAAHELCESILQSRRERENESQE 219
Query: 113 KDSL-YPLHATPSEIHAGIKNQSLLQGSFQASRENF-LEGQVNCEGYDKP-------ILV 163
YP H + AGIK+ +QG+ ++ +E V +G +L+
Sbjct: 220 SHGKEYPEHVPLEVLEAGIKSGRYIQGTLNVNKHRAQIEAFVRLQGASSKDSDLVSDVLI 279
Query: 164 QGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPAE 223
G + NR+I GD V V LLP+S+W K + G P+E
Sbjct: 280 HGMKARNRSIHGDVVVVELLPKSEWKG--------RTTALGENDGDDKAL-GES---PSE 327
Query: 224 RRPTGQIVGIIKRKWRQYC----GILQPNPLAGSSRHLFV-PAERKIPKIRVETRQIATL 278
PTG++VGI+++ WR Y I + +++ + V P + +IPKIR+ T+Q L
Sbjct: 328 PMPTGRVVGILQKNWRDYVVTFPSIEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAEAL 387
Query: 279 SGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP 338
R+VV IDSW S YP GHFVR LG IGD + E +L+E+ + FS+ + +P
Sbjct: 388 QDFRVVVRIDSWESTSMYPNGHFVRVLGRIGDLEGEIATILVENSISVVPFSEAQMCEMP 447
Query: 339 ---PM-PWEKST 346
P PW+ S+
Sbjct: 448 VNTPENPWKVSS 459
Score = 184 (69.8 bits), Expect = 5.6e-47, Sum P(4) = 5.6e-47
Identities = 38/72 (52%), Positives = 46/72 (63%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SLL 461
A+YFS+G + +FHHYGLA YTHFTSPIRRY+DIIVHRLL A I D +L
Sbjct: 769 ALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDKKMEIQENLF 828
Query: 462 DKKASTALCYNL 473
K LC ++
Sbjct: 829 SNKDLEELCRHI 840
Score = 161 (61.7 bits), Expect = 1.3e-44, Sum P(4) = 1.3e-44
Identities = 43/96 (44%), Positives = 53/96 (55%)
Query: 440 DIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHYGLATPIYTHFTSPIRRYAD 499
D IV++LL + + A +L ST C +FHHYGLA YTHFTSPIRRY+D
Sbjct: 751 DPIVNKLLRS-MATQAMSNALY---FSTGSCAE--EEFHHYGLALDKYTHFTSPIRRYSD 804
Query: 500 IIVHRLLAACIGADATYP---SLLDKKASTALCYNL 532
IIVHRLL A I D +L K LC ++
Sbjct: 805 IIVHRLLMAAISKDKKMEIQENLFSNKDLEELCRHI 840
Score = 110 (43.8 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
++ +E R DLR HL V S+DP GC D+DD L R L NGN+E+
Sbjct: 457 VSSQEEREREDLRKTHL-VFSIDPSGCEDVDDTLSVRALDNGNLEL 501
Score = 71 (30.1 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 526 TALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
T L +++ P GC D+DD L R L NGN+E+
Sbjct: 471 THLVFSIDPSGCEDVDDTLSVRALDNGNLEL 501
Score = 61 (26.5 bits), Expect = 5.6e-47, Sum P(4) = 5.6e-47
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L EL ++N RNR AQ++ + S L ++F+ K EE
Sbjct: 833 LEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPETEE 872
Score = 37 (18.1 bits), Expect = 5.6e-47, Sum P(4) = 5.6e-47
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 315 NEVLLLEHDVPHSKF-SDL 332
++ LL H PH +F S+L
Sbjct: 702 HQALLRRHPPPHQEFFSEL 720
>UNIPROTKB|F1MEA6 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9913 "Bos
taurus" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0016075
"rRNA catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177
IPI:IPI00701147 InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:DAAA02027893
Ensembl:ENSBTAT00000000481 Uniprot:F1MEA6
Length = 1053
Score = 371 (135.7 bits), Expect = 5.6e-47, Sum P(4) = 5.6e-47
Identities = 106/372 (28%), Positives = 176/372 (47%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + +F NE Y+ +E GES+ R++ A WY Y H + +
Sbjct: 103 LRNLLKDARHDCVLFANEFQQSCYLPRERGESMEKWQSRSIYNAAAWY--YH-HCQDRMP 159
Query: 61 VILLSEDVRN-RDLATQSG-LLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETSV 112
+++++ED + +++G + S + Y+ L L + + S++E E+
Sbjct: 160 IVMVTEDEEAIQQYGSETGGVFVISFKNYLDNFWPDLKAAHELCESILQSRRERENESQE 219
Query: 113 KDSL-YPLHATPSEIHAGIKNQSLLQGSFQASRENF-LEGQVNCEGYDKP-------ILV 163
YP H + AGIK+ +QG+ ++ +E V +G +L+
Sbjct: 220 SHGKEYPEHVPLEVLEAGIKSGRYIQGTLNVNKHRAQIEAFVRLQGASSKDSDLVSDVLI 279
Query: 164 QGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPAE 223
G + NR+I GD V V LLP+S+W K + G P+E
Sbjct: 280 HGMKARNRSIHGDVVVVELLPKSEWKG--------RTTALGENDGDDKAL-GES---PSE 327
Query: 224 RRPTGQIVGIIKRKWRQYC----GILQPNPLAGSSRHLFV-PAERKIPKIRVETRQIATL 278
PTG++VGI+++ WR Y I + +++ + V P + +IPKIR+ T+Q L
Sbjct: 328 PMPTGRVVGILQKNWRDYVVTFPSIEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAEAL 387
Query: 279 SGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP 338
R+VV IDSW S YP GHFVR LG IGD + E +L+E+ + FS+ + +P
Sbjct: 388 QDFRVVVRIDSWESTSMYPNGHFVRVLGRIGDLEGEIATILVENSISVVPFSEAQMCEMP 447
Query: 339 ---PM-PWEKST 346
P PW+ S+
Sbjct: 448 VNTPENPWKVSS 459
Score = 184 (69.8 bits), Expect = 5.6e-47, Sum P(4) = 5.6e-47
Identities = 38/72 (52%), Positives = 46/72 (63%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SLL 461
A+YFS+G + +FHHYGLA YTHFTSPIRRY+DIIVHRLL A I D +L
Sbjct: 769 ALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDKKMEIQENLF 828
Query: 462 DKKASTALCYNL 473
K LC ++
Sbjct: 829 SNKDLEELCRHI 840
Score = 161 (61.7 bits), Expect = 1.3e-44, Sum P(4) = 1.3e-44
Identities = 43/96 (44%), Positives = 53/96 (55%)
Query: 440 DIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHYGLATPIYTHFTSPIRRYAD 499
D IV++LL + + A +L ST C +FHHYGLA YTHFTSPIRRY+D
Sbjct: 751 DPIVNKLLRS-MATQAMSNALY---FSTGSCAE--EEFHHYGLALDKYTHFTSPIRRYSD 804
Query: 500 IIVHRLLAACIGADATYP---SLLDKKASTALCYNL 532
IIVHRLL A I D +L K LC ++
Sbjct: 805 IIVHRLLMAAISKDKKMEIQENLFSNKDLEELCRHI 840
Score = 110 (43.8 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
++ +E R DLR HL V S+DP GC D+DD L R L NGN+E+
Sbjct: 457 VSSQEEREREDLRKTHL-VFSIDPSGCEDVDDTLSVRALDNGNLEL 501
Score = 71 (30.1 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 526 TALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
T L +++ P GC D+DD L R L NGN+E+
Sbjct: 471 THLVFSIDPSGCEDVDDTLSVRALDNGNLEL 501
Score = 61 (26.5 bits), Expect = 5.6e-47, Sum P(4) = 5.6e-47
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L EL ++N RNR AQ++ + S L ++F+ K EE
Sbjct: 833 LEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPETEE 872
Score = 37 (18.1 bits), Expect = 5.6e-47, Sum P(4) = 5.6e-47
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 315 NEVLLLEHDVPHSKF-SDL 332
++ LL H PH +F S+L
Sbjct: 702 HQALLRRHPPPHQEFFSEL 720
>MGI|MGI:2143272 [details] [associations]
symbol:Dis3l "DIS3 mitotic control homolog (S.
cerevisiae)-like" species:10090 "Mus musculus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=ISO] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016075 "rRNA catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 MGI:MGI:2143272 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177 CTD:115752
eggNOG:COG0557 HOGENOM:HOG000191945 HOVERGEN:HBG059397
OrthoDB:EOG4229HZ InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
EMBL:AK173310 EMBL:AK029974 EMBL:BC056939 IPI:IPI00223964
IPI:IPI00881768 RefSeq:NP_001001295.2 RefSeq:NP_001171255.1
RefSeq:NP_766107.1 UniGene:Mm.268341 ProteinModelPortal:Q8C0S1
SMR:Q8C0S1 STRING:Q8C0S1 PhosphoSite:Q8C0S1 PaxDb:Q8C0S1
PRIDE:Q8C0S1 Ensembl:ENSMUST00000068367 Ensembl:ENSMUST00000113890
Ensembl:ENSMUST00000120760 Ensembl:ENSMUST00000168844 GeneID:213550
KEGG:mmu:213550 UCSC:uc009qbu.2 UCSC:uc009qbw.2
GeneTree:ENSGT00530000063106 InParanoid:Q8C0S1 NextBio:374039
Bgee:Q8C0S1 CleanEx:MM_DIS3L Genevestigator:Q8C0S1 Uniprot:Q8C0S1
Length = 1053
Score = 366 (133.9 bits), Expect = 4.7e-46, Sum P(4) = 4.7e-46
Identities = 109/372 (29%), Positives = 170/372 (45%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + +F NE Y+ +E GE++ R++ A WY Y H E +
Sbjct: 103 LRNLLKDARHDCVLFANEFQQHCYLPREKGEAMEKWQTRSIYNSAVWY--YH-HCEDRMP 159
Query: 61 VILLSED---VRNRDLATQSGLLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS 111
+++++ED ++ T+ G+ S + Y+ L L D + S++E E+
Sbjct: 160 IVMVTEDEEAIQKYGSETE-GVFVISFKNYLDNFWPDLKAAHDLCDSILQSRRERETESQ 218
Query: 112 -VKDSLYPLHATPSEIHAGIKNQSLLQGSFQASR-----ENF--LEGQVNCE-GYDKPIL 162
YP H + AGIK+ +QG ++ E F L G + + G IL
Sbjct: 219 ETHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDIL 278
Query: 163 VQGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPA 222
+ G + NR+I GD V V +LP+S+W G P+
Sbjct: 279 IHGSKARNRSIHGDVVVVEMLPKSEWKGRTAALGENDSDDKAS---------GES---PS 326
Query: 223 ERRPTGQIVGIIKRKWRQYCGILQPNPLAGSS-----RHLFVPAERKIPKIRVETRQIAT 277
E PTG++VGI+++ WR Y S + L P + +IPKIR+ T+Q
Sbjct: 327 EPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAEA 386
Query: 278 LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYL 337
L R+VV IDSW S YP GHFVR LG IGD + E +L+E+ + FS+ + +
Sbjct: 387 LQDFRVVVRIDSWEATSVYPNGHFVRVLGRIGDLEGEIATILVENSISVVPFSEAQMCEM 446
Query: 338 P---PM-PWEKS 345
P P PW+ S
Sbjct: 447 PVNTPENPWKVS 458
Score = 183 (69.5 bits), Expect = 4.7e-46, Sum P(4) = 4.7e-46
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SLL 461
A+YFS+G + +FHHYGLA YTHFTSPIRRY+DI+VHRLL A I D +L
Sbjct: 769 ALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKENLF 828
Query: 462 DKKASTALCYNL 473
K LC ++
Sbjct: 829 SNKNLEELCRHI 840
Score = 158 (60.7 bits), Expect = 1.8e-43, Sum P(4) = 1.8e-43
Identities = 35/70 (50%), Positives = 41/70 (58%)
Query: 466 STALCYNLVSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SLLDK 522
ST C +FHHYGLA YTHFTSPIRRY+DI+VHRLL A I D +L
Sbjct: 773 STGSCAE--EEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKENLFSN 830
Query: 523 KASTALCYNL 532
K LC ++
Sbjct: 831 KNLEELCRHI 840
Score = 107 (42.7 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
++ +E R DLR HL V S+DP GC D+DD L R L NGN+E+
Sbjct: 457 VSPKEEQERKDLRTTHL-VFSIDPKGCEDVDDTLSVRTLNNGNLEL 501
Score = 71 (30.1 bits), Expect = 2.2e-34, Sum P(3) = 2.2e-34
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 525 STALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
+T L +++ P GC D+DD L R L NGN+E+
Sbjct: 470 TTHLVFSIDPKGCEDVDDTLSVRTLNNGNLEL 501
Score = 57 (25.1 bits), Expect = 4.7e-46, Sum P(4) = 4.7e-46
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFR-RKSITEE 610
L EL ++N RNR AQ + + S L ++F+ R + TEE
Sbjct: 833 LEELCRHINNRNRAAQRSQKQSTELFQCMYFKDRDAETEE 872
Score = 39 (18.8 bits), Expect = 4.7e-46, Sum P(4) = 4.7e-46
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 315 NEVLLLEHDVPHSKF-SDL 332
++ LL +H PH +F S+L
Sbjct: 702 HQALLRQHPPPHQEFFSEL 720
>UNIPROTKB|Q5R5N8 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9601 "Pongo
abelii" [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0003723
GO:GO:0000175 GO:GO:0000177 CTD:115752 HOGENOM:HOG000191945
HOVERGEN:HBG059397 InterPro:IPR022966 PROSITE:PS01175 EMBL:CR860819
RefSeq:NP_001126723.1 UniGene:Pab.8044 ProteinModelPortal:Q5R5N8
GeneID:100173724 KEGG:pon:100173724 Uniprot:Q5R5N8
Length = 1054
Score = 360 (131.8 bits), Expect = 8.1e-46, Sum P(4) = 8.1e-46
Identities = 108/372 (29%), Positives = 169/372 (45%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + +F NE Y+ +E GES+ R++ A WY Y H + +
Sbjct: 103 LRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSIYNAAVWY--YH-HCQDRMP 159
Query: 61 VILLSED---VRNRDLATQSGLLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS 111
+++++ED ++ T+ G+ S + Y+ L L D + S++E E+
Sbjct: 160 IVMVTEDEEAIQQYGSETE-GVFVISFKNYLDNFWPDLKAAHELCDSILQSRRERENESQ 218
Query: 112 VKDSL-YPLHATPSEIHAGIKNQSLLQGSFQASRENF-LEGQVNCEGYDKP-------IL 162
YP H + AGIK+ +QG ++ +E V +G IL
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 278
Query: 163 VQGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPA 222
+ G + NR+I GD V V LLP+++W G P+
Sbjct: 279 IHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKAS---------GES---PS 326
Query: 223 ERRPTGQIVGIIKRKWRQYCGILQPNPLAGSS-----RHLFVPAERKIPKIRVETRQIAT 277
E PTG++VGI+++ WR Y S + L P + +IPKIR+ T+Q T
Sbjct: 327 EPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAET 386
Query: 278 LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYL 337
L R+VV IDSW S YP GHFVR LG IGD + E +L+E+ + FS+ + +
Sbjct: 387 LQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQMCEM 446
Query: 338 P---PM-PWEKS 345
P P PW+ S
Sbjct: 447 PVNTPENPWKVS 458
Score = 183 (69.5 bits), Expect = 8.1e-46, Sum P(4) = 8.1e-46
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SLL 461
A+YFS+G + +FHHYGLA YTHFTSPIRRY+DI+VHRLL A I D +L
Sbjct: 769 ALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLF 828
Query: 462 DKKASTALCYNL 473
K LC ++
Sbjct: 829 SNKDLEELCRHI 840
Score = 163 (62.4 bits), Expect = 9.5e-44, Sum P(4) = 9.5e-44
Identities = 43/96 (44%), Positives = 53/96 (55%)
Query: 440 DIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHYGLATPIYTHFTSPIRRYAD 499
D IV+RLL + + A +L ST C +FHHYGLA YTHFTSPIRRY+D
Sbjct: 751 DPIVNRLLRS-MATQAMSNALY---FSTGSCAE--EEFHHYGLALDKYTHFTSPIRRYSD 804
Query: 500 IIVHRLLAACIGADATYP---SLLDKKASTALCYNL 532
I+VHRLL A I D +L K LC ++
Sbjct: 805 IVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHI 840
Score = 113 (44.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
++ EE +R DLR HL V S+DP GC D+DD L R L NGN+E+
Sbjct: 457 VSPEEEQKRKDLRKSHL-VFSIDPKGCEDVDDTLSVRTLNNGNLEL 501
Score = 70 (29.7 bits), Expect = 4.5e-34, Sum P(3) = 4.5e-34
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 522 KKASTALCYNLPGCTDIDDALHCRPLPNGNIEV 554
+K+ + GC D+DD L R L NGN+E+
Sbjct: 469 RKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLEL 501
Score = 62 (26.9 bits), Expect = 8.1e-46, Sum P(4) = 8.1e-46
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L EL ++N RNR AQ++ + S L ++F+ K EE
Sbjct: 833 LEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPATEE 872
Score = 39 (18.8 bits), Expect = 8.1e-46, Sum P(4) = 8.1e-46
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 315 NEVLLLEHDVPHSKF-SDL 332
++ LL +H PH +F S+L
Sbjct: 702 HQALLRQHPPPHQEFFSEL 720
>RGD|1308959 [details] [associations]
symbol:Dis3l "DIS3 mitotic control homolog (S. cerevisiae)-like"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO;ISS] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=ISO;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0016075 "rRNA catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=IEA;ISO]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 RGD:1308959
GO:GO:0005886 GO:GO:0005813 GO:GO:0003723 GO:GO:0016075
GO:GO:0000175 GO:GO:0000177 CTD:115752 eggNOG:COG0557
HOGENOM:HOG000191945 HOVERGEN:HBG059397 OrthoDB:EOG4229HZ
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
EMBL:BC085932 IPI:IPI00366657 RefSeq:NP_001008381.1
UniGene:Rn.24884 ProteinModelPortal:Q5U2P0 STRING:Q5U2P0
PRIDE:Q5U2P0 Ensembl:ENSRNOT00000014071 GeneID:363077
KEGG:rno:363077 UCSC:RGD:1308959 InParanoid:Q5U2P0 NextBio:682358
Genevestigator:Q5U2P0 Uniprot:Q5U2P0
Length = 1054
Score = 365 (133.5 bits), Expect = 1.0e-45, Sum P(4) = 1.0e-45
Identities = 109/372 (29%), Positives = 170/372 (45%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + +F NE Y+ +E GE++ R++ A WY Y H E +
Sbjct: 103 LRNLLKDARHDCVLFANEFQQHCYLPREKGEAMEKWQTRSIYNSAVWY--YH-HCEDRMP 159
Query: 61 VILLSED---VRNRDLATQSGLLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS 111
+++++ED ++ T+ G+ S + Y+ L L D + S++E E+
Sbjct: 160 IVMVTEDEEAIQQYGSETE-GVFVISFKNYLDNFWPDLKAAHELCDSIIQSRRERESESQ 218
Query: 112 -VKDSLYPLHATPSEIHAGIKNQSLLQGSFQASR-----ENF--LEGQVNCE-GYDKPIL 162
YP H + AGIK+ +QG ++ E F L+G + + G IL
Sbjct: 219 ETHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSGLVSDIL 278
Query: 163 VQGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPA 222
+ G + NR+I GD V V LLP+S+W G P+
Sbjct: 279 IHGSKARNRSIHGDVVVVELLPKSEWKGRTAALCENDSEDKAS---------GES---PS 326
Query: 223 ERRPTGQIVGIIKRKWRQYCGILQPNPLAGSS-----RHLFVPAERKIPKIRVETRQIAT 277
E PTG++VGI+++ WR Y S + L P + +IPKIR+ T+Q
Sbjct: 327 EPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAEA 386
Query: 278 LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYL 337
L R+VV IDSW S YP GHFVR LG IGD + E +L+E+ + FS+ + +
Sbjct: 387 LQDFRVVVRIDSWETTSVYPNGHFVRVLGRIGDLEGEIATILVENSINVVPFSEAQMCEM 446
Query: 338 P----PMPWEKS 345
P PW+ S
Sbjct: 447 PVNTAENPWKVS 458
Score = 183 (69.5 bits), Expect = 1.0e-45, Sum P(4) = 1.0e-45
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SLL 461
A+YFS+G + +FHHYGLA YTHFTSPIRRY+DI+VHRLL A I D +L
Sbjct: 769 ALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKVEIKENLF 828
Query: 462 DKKASTALCYNL 473
K LC ++
Sbjct: 829 SNKNLEELCRHI 840
Score = 159 (61.0 bits), Expect = 3.1e-43, Sum P(4) = 3.1e-43
Identities = 41/97 (42%), Positives = 54/97 (55%)
Query: 439 ADIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHYGLATPIYTHFTSPIRRYA 498
+D +V++LL + + A +L ST C +FHHYGLA YTHFTSPIRRY+
Sbjct: 750 SDPLVNKLLRS-MATQAMSNALY---FSTGSCAE--EEFHHYGLALDKYTHFTSPIRRYS 803
Query: 499 DIIVHRLLAACIGADATYP---SLLDKKASTALCYNL 532
DI+VHRLL A I D +L K LC ++
Sbjct: 804 DIVVHRLLMAAISKDKKVEIKENLFSNKNLEELCRHI 840
Score = 111 (44.1 bits), Expect = 7.5e-37, Sum P(2) = 7.5e-37
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
++ +E R DLR HL V S+DP GC D+DDAL R L NGN+E+
Sbjct: 457 VSPKEEQERRDLRSTHL-VFSIDPKGCEDVDDALSVRTLNNGNLEL 501
Score = 78 (32.5 bits), Expect = 9.0e-35, Sum P(3) = 9.0e-35
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 525 STALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
ST L +++ P GC D+DDAL R L NGN+E+
Sbjct: 470 STHLVFSIDPKGCEDVDDALSVRTLNNGNLEL 501
Score = 55 (24.4 bits), Expect = 1.0e-45, Sum P(4) = 1.0e-45
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFR-RKSITEE 610
L EL ++N RNR AQ + + S L ++F+ R TEE
Sbjct: 833 LEELCRHINNRNRAAQRSQKQSTELFQCMYFKDRDPETEE 872
Score = 39 (18.8 bits), Expect = 1.0e-45, Sum P(4) = 1.0e-45
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 315 NEVLLLEHDVPHSKF-SDL 332
++ LL +H PH +F S+L
Sbjct: 702 HQALLRQHPPPHQEFFSEL 720
>UNIPROTKB|Q8TF46 [details] [associations]
symbol:DIS3L "DIS3-like exonuclease 1" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP;IDA] [GO:0016075
"rRNA catabolic process" evidence=IMP;IDA] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 GO:GO:0005886
GO:GO:0005813 GO:GO:0003723 GO:GO:0016075 EMBL:CH471082
GO:GO:0000175 GO:GO:0000177 CTD:115752 eggNOG:COG0557
HOGENOM:HOG000191945 HOVERGEN:HBG059397 InterPro:IPR022966
PROSITE:PS01175 EMBL:AB075835 EMBL:AK095407 EMBL:AC055855
EMBL:BC014124 EMBL:BC022089 IPI:IPI00291003 IPI:IPI00295876
IPI:IPI00879677 IPI:IPI00879828 RefSeq:NP_001137160.1
RefSeq:NP_588616.1 UniGene:Hs.446251 ProteinModelPortal:Q8TF46
SMR:Q8TF46 IntAct:Q8TF46 STRING:Q8TF46 PhosphoSite:Q8TF46
DMDM:166201903 PaxDb:Q8TF46 PeptideAtlas:Q8TF46 PRIDE:Q8TF46
DNASU:115752 Ensembl:ENST00000319194 Ensembl:ENST00000319212
GeneID:115752 KEGG:hsa:115752 UCSC:uc002app.3 UCSC:uc002apq.2
GeneCards:GC15P066585 HGNC:HGNC:28698 HPA:HPA041805 MIM:614183
neXtProt:NX_Q8TF46 PharmGKB:PA162383675 InParanoid:Q8TF46
OMA:IPRFGIK ChiTaRS:DIS3L GenomeRNAi:115752 NextBio:79674
ArrayExpress:Q8TF46 Bgee:Q8TF46 CleanEx:HS_DIS3L
Genevestigator:Q8TF46 Uniprot:Q8TF46
Length = 1054
Score = 358 (131.1 bits), Expect = 3.6e-45, Sum P(4) = 3.6e-45
Identities = 107/372 (28%), Positives = 169/372 (45%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + +F NE Y+ +E GES+ R++ A WY Y H + +
Sbjct: 103 LRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSIYNAAVWY--YH-HCQDRMP 159
Query: 61 VILLSED---VRNRDLATQSGLLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS 111
+++++ED ++ T+ G+ + + Y+ L L D + S++E E+
Sbjct: 160 IVMVTEDEEAIQQYGSETE-GVFVITFKNYLDNFWPDLKAAHELCDSILQSRRERENESQ 218
Query: 112 VKDSL-YPLHATPSEIHAGIKNQSLLQGSFQASRENF-LEGQVNCEGYDKP-------IL 162
YP H + AGIK+ +QG ++ +E V +G IL
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 278
Query: 163 VQGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPA 222
+ G + NR+I GD V V LLP+++W G P+
Sbjct: 279 IHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKAS---------GES---PS 326
Query: 223 ERRPTGQIVGIIKRKWRQYCGILQPNPLAGSS-----RHLFVPAERKIPKIRVETRQIAT 277
E PTG++VGI+++ WR Y S + L P + +IPKIR+ T+Q T
Sbjct: 327 EPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAET 386
Query: 278 LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYL 337
L R+VV IDSW S YP GHFVR LG IGD + E +L+E+ + FS+ + +
Sbjct: 387 LQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQMCEM 446
Query: 338 P---P-MPWEKS 345
P P PW+ S
Sbjct: 447 PVNTPESPWKVS 458
Score = 183 (69.5 bits), Expect = 3.6e-45, Sum P(4) = 3.6e-45
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SLL 461
A+YFS+G + +FHHYGLA YTHFTSPIRRY+DI+VHRLL A I D +L
Sbjct: 769 ALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLF 828
Query: 462 DKKASTALCYNL 473
K LC ++
Sbjct: 829 SNKDLEELCRHI 840
Score = 163 (62.4 bits), Expect = 4.2e-43, Sum P(4) = 4.2e-43
Identities = 43/96 (44%), Positives = 53/96 (55%)
Query: 440 DIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHYGLATPIYTHFTSPIRRYAD 499
D IV+RLL + + A +L ST C +FHHYGLA YTHFTSPIRRY+D
Sbjct: 751 DPIVNRLLRS-MATQAMSNALY---FSTGSCAE--EEFHHYGLALDKYTHFTSPIRRYSD 804
Query: 500 IIVHRLLAACIGADATYP---SLLDKKASTALCYNL 532
I+VHRLL A I D +L K LC ++
Sbjct: 805 IVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHI 840
Score = 113 (44.8 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
++ EE +R DLR HL V S+DP GC D+DD L R L NGN+E+
Sbjct: 457 VSPEEEQKRKDLRKSHL-VFSIDPKGCEDVDDTLSVRTLNNGNLEL 501
Score = 70 (29.7 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 522 KKASTALCYNLPGCTDIDDALHCRPLPNGNIEV 554
+K+ + GC D+DD L R L NGN+E+
Sbjct: 469 RKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLEL 501
Score = 58 (25.5 bits), Expect = 3.6e-45, Sum P(4) = 3.6e-45
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L EL ++N RN+ AQ++ + S L ++F+ K EE
Sbjct: 833 LEELCRHINNRNQAAQHSQKQSTELFQCMYFKDKDPATEE 872
Score = 39 (18.8 bits), Expect = 3.6e-45, Sum P(4) = 3.6e-45
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 315 NEVLLLEHDVPHSKF-SDL 332
++ LL +H PH +F S+L
Sbjct: 702 HQALLRQHPPPHQEFFSEL 720
>UNIPROTKB|Q0P4R5 [details] [associations]
symbol:dis3l "DIS3-like exonuclease 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase
complex)" evidence=ISS] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0003723 GO:GO:0000175 GO:GO:0000177 CTD:115752
eggNOG:COG0557 HOGENOM:HOG000191945 HOVERGEN:HBG059397
InterPro:IPR022966 PROSITE:PS01175 EMBL:BC121935
RefSeq:NP_001072835.1 UniGene:Str.52789 ProteinModelPortal:Q0P4R5
STRING:Q0P4R5 GeneID:780296 KEGG:xtr:780296 Xenbase:XB-GENE-1013178
Uniprot:Q0P4R5
Length = 1039
Score = 349 (127.9 bits), Expect = 1.6e-43, Sum P(3) = 1.6e-43
Identities = 114/370 (30%), Positives = 167/370 (45%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L L+ + +F NE Y+ +E GES R + WY Y+ H + +
Sbjct: 98 LCSLLRDTRHDCILFSNEFQNHAYLPREMGESALAWQTRCIYNSCVWY--YQ-HCQKKIP 154
Query: 61 VILLSED---VRNRDLATQSGLLTSS---IEGYISTLSNGEPLLDKLSK--KEAVVETSV 112
V++++ED +R + TQ + S +E + L L L + +E +E+
Sbjct: 155 VVMVTEDKSVIRQYNTETQEVYVVSFQIYLETFWPNLKGALELYKSLKETHRERELESRE 214
Query: 113 KDSL-YPLHATPSEI-HAGIKNQSLLQGSFQASRENF-LEGQVNCEGY-------DKPIL 162
+ YP H P EI AGIK+ QG ++ LEG V +G IL
Sbjct: 215 GNGKEYPEHL-PLEILEAGIKSGRYQQGVLSVNKHRAQLEGFVRLQGLGGKETDIQSDIL 273
Query: 163 VQGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPA 222
+ G + NRAI GD VAV LL S+W K + A
Sbjct: 274 IYGTKPRNRAIHGDLVAVELLSRSEWKG--------RNGALCENETDEKAVDAQ-----A 320
Query: 223 ERRPTGQIVGIIKRKWRQYCGILQPNP---LAGSS--RHLFVPAERKIPKIRVETRQIAT 277
E PTG++VGI++R WR Y G + R L +P + +IPKIR+ T+Q
Sbjct: 321 EVMPTGRVVGILQRNWRDYVATFPAKEDIETQGKNAQRVLVMPWDYRIPKIRISTQQAEA 380
Query: 278 LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYL 337
L R+VV IDSW S YP GHFVR LG G+ + E +L+E+ + + FS+ L+ +
Sbjct: 381 LQDYRVVVRIDSWESTSLYPNGHFVRVLGRTGNLEAEIATILVENSISVNPFSEAQLAEM 440
Query: 338 P---P-MPWE 343
P P PW+
Sbjct: 441 PSNTPESPWQ 450
Score = 176 (67.0 bits), Expect = 1.6e-43, Sum P(3) = 1.6e-43
Identities = 36/69 (52%), Positives = 45/69 (65%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKK 464
A YFS+G + +F+HYGLA YTHFTSPIRRYADI+VHRLL A + +LL K
Sbjct: 760 ARYFSTGSYTEDEFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAVNKGPK-DNLLGNK 818
Query: 465 ASTALCYNL 473
LC ++
Sbjct: 819 DLEELCRHI 827
Score = 152 (58.6 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 476 DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNL 532
+F+HYGLA YTHFTSPIRRYADI+VHRLL A + +LL K LC ++
Sbjct: 772 EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAVNKGPK-DNLLGNKDLEELCRHI 827
Score = 105 (42.0 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 611 EVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
E R DLR HL V S+DP GC D+DDAL R LP+G++E+
Sbjct: 454 EEGDRLDLRKTHL-VFSIDPKGCEDVDDALSIRKLPSGHLEL 494
Score = 74 (31.1 bits), Expect = 6.4e-33, Sum P(3) = 6.4e-33
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 520 LDKKASTALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
LD + T L +++ P GC D+DDAL R LP+G++E+
Sbjct: 459 LDLR-KTHLVFSIDPKGCEDVDDALSIRKLPSGHLEL 494
Score = 59 (25.8 bits), Expect = 1.6e-43, Sum P(3) = 1.6e-43
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRK 605
L EL ++N RNR AQ+ + S L +FF+ K
Sbjct: 820 LEELCRHINVRNRAAQHCQKQSTELFQCMFFKDK 853
>UNIPROTKB|Q6GN11 [details] [associations]
symbol:dis3l "DIS3-like exonuclease 1" species:8355
"Xenopus laevis" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase complex)"
evidence=ISS] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
GO:GO:0003723 GO:GO:0000175 GO:GO:0000177 CTD:115752
HOVERGEN:HBG059397 InterPro:IPR022966 PROSITE:PS01175 EMBL:BC073711
RefSeq:NP_001086021.1 UniGene:Xl.3437 ProteinModelPortal:Q6GN11
GeneID:444450 KEGG:xla:444450 Xenbase:XB-GENE-1013183
Uniprot:Q6GN11
Length = 1040
Score = 341 (125.1 bits), Expect = 5.9e-42, Sum P(3) = 5.9e-42
Identities = 112/371 (30%), Positives = 171/371 (46%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L L+ + +F NE Y+ +E GES R + WY Y+ H + +
Sbjct: 99 LCSLLRDTRHDCILFSNEFQNHAYLPREMGESALAWQTRCIYNSCVWY--YQ-HCQKKIP 155
Query: 61 VILLSED---VRNRDLATQSGLLTSSIEGYISTL-SNGEPLLDKL-SKKEAVVETSVKD- 114
V++++ED + + TQ + S + Y+ T N + L+ S ++ +E ++
Sbjct: 156 VVMVTEDESVIGKYNTETQE-VYVVSFQIYLETFWPNFKGALELYKSLRDTHLERKLESR 214
Query: 115 ----SLYPLHATPSEI-HAGIKNQSLLQGSFQASRENF-LEGQVNCEGY-------DKPI 161
YP H P EI AGIK+ QG ++ LE V +G I
Sbjct: 215 ESNGKEYPEHL-PLEILEAGIKSGRYKQGVLSVNKHRAQLESFVRLQGLGGKETDIQSDI 273
Query: 162 LVQGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPP 221
+ G + NRAI GD VAV LLP+S+W K+ G+
Sbjct: 274 FIHGTKPRNRAIHGDLVAVELLPKSEWKG--------RTGALCENETDEKV--GDMQ--- 320
Query: 222 AERRPTGQIVGIIKRKWRQYCGIL---QPNPLAGSSRH--LFVPAERKIPKIRVETRQIA 276
AE PTG++VGI++R WR Y + G + L +P + +IPKIR+ T+Q
Sbjct: 321 AEVMPTGRVVGIMQRNWRDYVVTFPAKEDTETQGKNTQKVLVMPWDYRIPKIRISTQQAE 380
Query: 277 TLSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSY 336
L R+VV IDSW +S YP GHFVRALG G+ + E +L+E+ + + FS+ L+
Sbjct: 381 ALQNYRVVVRIDSWESNSLYPNGHFVRALGRAGNLEAEIATILVENSISLNPFSEAQLAE 440
Query: 337 LPPM----PWE 343
+P PW+
Sbjct: 441 MPSNTHENPWQ 451
Score = 174 (66.3 bits), Expect = 5.9e-42, Sum P(3) = 5.9e-42
Identities = 36/69 (52%), Positives = 44/69 (63%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKK 464
A YFS+G + +F+HYGLA YTHFTSPIRRYADI+VHRLL A + LL K
Sbjct: 761 ARYFSTGSYTEDEFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAVNKGPK-DHLLGNK 819
Query: 465 ASTALCYNL 473
LC ++
Sbjct: 820 DLEELCRHI 828
Score = 150 (57.9 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 476 DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALCYNL 532
+F+HYGLA YTHFTSPIRRYADI+VHRLL A + LL K LC ++
Sbjct: 773 EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAVNKGPK-DHLLGNKDLEELCRHI 828
Score = 73 (30.8 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 520 LDKKASTALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
LD + T L +++ P GC D+DDAL R LP+G++E+
Sbjct: 460 LDLR-ETHLVFSIDPKGCEDVDDALSIRVLPSGDLEL 495
Score = 55 (24.4 bits), Expect = 5.9e-42, Sum P(3) = 5.9e-42
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRK 605
L EL ++N RNR AQ + S L +FF+ K
Sbjct: 821 LEELCRHINARNRAAQQCQKQSTELFQCMFFKDK 854
Score = 40 (19.1 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 302 VRALGPIGDKDTENEVLLLEHDVPHSKFSDL 332
+R L P GD + + + H V H+ ++D+
Sbjct: 485 IRVL-PSGDLELGVHIADVTHFVQHNTYTDI 514
>DICTYBASE|DDB_G0268186 [details] [associations]
symbol:DDB_G0268186 species:44689 "Dictyostelium
discoideum" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 dictyBase:DDB_G0268186 EMBL:AAFI02000003
GO:GO:0003723 GO:GO:0004540 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 RefSeq:XP_647622.1 EnsemblProtists:DDB0189843
GeneID:8616436 KEGG:ddi:DDB_G0268186 InParanoid:Q55FB1 OMA:YMILANS
Uniprot:Q55FB1
Length = 1504
Score = 291 (107.5 bits), Expect = 1.0e-36, Sum P(4) = 1.0e-36
Identities = 71/232 (30%), Positives = 113/232 (48%)
Query: 125 EIHAGIKNQSLLQGSFQASRENFLEGQVNCEGY--DKPILVQGREGLNRAIDGDTVAVRL 182
+IH + N+ + + S N + G+ DK +++ G+ NRA+ GD VAV L
Sbjct: 476 KIHMNLHNRE--ESFVKISSSNGIATNQTLSGFHGDK-VMIIGKFNQNRAVHGDKVAVSL 532
Query: 183 LPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGN----KTVPPAERRPTGQIVGIIKRKW 238
LPE QW P + K + PTG+++GI +R W
Sbjct: 533 LPEDQW-LPYDSSLNLDDDDDDDNDNSNDDNSNDEEYFKNNNDKLKIPTGKVIGIFQRNW 591
Query: 239 RQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSGQRIVVAIDSWPRHSRYPQ 298
R Y G ++ N ++ + VP + +IP IRV T+ + G+R+V+ +DSW +S YP
Sbjct: 592 RDYIGTVEKNTSLFTNFLMIVPFDYRIPLIRVPTKNPSQYLGKRLVIRMDSWDLNSNYPM 651
Query: 299 GHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPWEKSTGRPW 350
GH+V ++G G +TE L++EHD+ ++ +L LP E S PW
Sbjct: 652 GHYVSSIGESGSLETELSALMVEHDISLKQWPQSILKCLP----ESSDQSPW 699
Score = 167 (63.8 bits), Expect = 1.0e-36, Sum P(4) = 1.0e-36
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 404 QAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLL 447
+AVYFS+G + S+F+HYGLA YTHFTSPIRRY+DIIVHR L
Sbjct: 1025 EAVYFSTGSVNVSEFYHYGLAIDKYTHFTSPIRRYSDIIVHRQL 1068
Score = 139 (54.0 bits), Expect = 7.7e-34, Sum P(4) = 7.7e-34
Identities = 26/33 (78%), Positives = 29/33 (87%)
Query: 474 VSDFHHYGLATPIYTHFTSPIRRYADIIVHRLL 506
VS+F+HYGLA YTHFTSPIRRY+DIIVHR L
Sbjct: 1036 VSEFYHYGLAIDKYTHFTSPIRRYSDIIVHRQL 1068
Score = 70 (29.7 bits), Expect = 5.8e-26, Sum P(3) = 5.8e-26
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 607 ITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
I EE A R L + + S+DP G DIDDA+ N IE+
Sbjct: 701 IPPEEKAYRRQLTNHHIMSIDPLGSKDIDDAISIGYPTNDIIEI 744
Score = 67 (28.6 bits), Expect = 1.0e-36, Sum P(4) = 1.0e-36
Identities = 14/71 (19%), Positives = 33/71 (46%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESA-- 58
LK LI + F NE ET+++++ ++ ++ + + WY+ + L
Sbjct: 291 LKQLIFQTEKSICYFSNELFIETFLDRDNSTNLEIHQNKIISKAVQWYINHFNQLSKVNK 350
Query: 59 --VRVILLSED 67
++IL++ +
Sbjct: 351 RKYKIILITNN 361
Score = 50 (22.7 bits), Expect = 1.0e-36, Sum P(4) = 1.0e-36
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEEV-ARRTDLR 619
+ +L +LN RNR ++ R + L L+F K +E V A TD+R
Sbjct: 1102 ITQLTDHLNIRNRASKTVQRDATELFQSLYF--KLFPKENVLAIITDIR 1148
Score = 42 (19.8 bits), Expect = 2.5e-10, Sum P(4) = 2.5e-10
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 293 HSRYPQGHFVRALGPIGDKDTENEV 317
+ R H + ++ P+G KD ++ +
Sbjct: 708 YRRQLTNHHIMSIDPLGSKDIDDAI 732
>UNIPROTKB|I3LEH1 [details] [associations]
symbol:DIS3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0016075
"rRNA catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0005886 GO:GO:0005813
GO:GO:0003723 GO:GO:0016075 GO:GO:0000175 GO:GO:0000177
InterPro:IPR022966 PROSITE:PS01175 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:CU062652
Ensembl:ENSSSCT00000024119 Uniprot:I3LEH1
Length = 1059
Score = 269 (99.8 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 100/378 (26%), Positives = 158/378 (41%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + +F NE Y+ +E GES+ R++ A W+ Y H + +
Sbjct: 103 LRNLLKDARHDCVLFANEFQQSCYLPRERGESMEKWQSRSIYNAAVWF--YH-HCQDRMP 159
Query: 61 VILLSED---VRNRDLATQSGLLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS 111
V++++ED V+ T+ G+ S + Y+ L L + + S++E E+
Sbjct: 160 VVMVTEDEEAVQQYGSETE-GVFVISFKSYLDNFWPDLKAAHELCESIVQSRRERENESQ 218
Query: 112 VKDSL-YPLHATPSEIHAGIKNQSLLQGSFQASR-----ENF--LEG-QVNCEGYDKPIL 162
YP H + AGIK+ +QG ++ E F L+G G IL
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASTKDSGLVSDIL 278
Query: 163 VQGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPA 222
+ G + NR+I GD V V LLP+++W G P+
Sbjct: 279 IHGMKARNRSIHGDVVVVELLPKNEWKGRTTALGENDGDDKAS---------GES---PS 326
Query: 223 ERRPTGQIVGIIKRKWRQ----YCGILQP----NPLAGSSRH--LFVPAERKIPKIRVET 272
E PTG ++ W+Q + I P +G H L+ +
Sbjct: 327 EPMPTGYSDQLVLSPWKQAFPKHPHISFPCFKSGAKSGQREHRILYALGLHMSSNSGISA 386
Query: 273 RQIATLSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDL 332
+ L R VV IDSW S YP GHFVR LG IGD + E +L+E+ + FS+
Sbjct: 387 HRAEALRDFREVVRIDSWESTSMYPNGHFVRVLGRIGDLEGEIATILVENSISVVPFSEA 446
Query: 333 VLSYLP---PM-PWEKST 346
+ +P P PW+ S+
Sbjct: 447 QMCEMPVNTPENPWKVSS 464
Score = 179 (68.1 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 37/72 (51%), Positives = 45/72 (62%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SLL 461
A+YFS+G + +FHHYGLA YTHFTSPIRRY+DIIVHRLL I D +L
Sbjct: 774 ALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMEAISKDKKMEIKENLF 833
Query: 462 DKKASTALCYNL 473
K LC ++
Sbjct: 834 SNKDLEELCKHI 845
Score = 157 (60.3 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 45/109 (41%), Positives = 56/109 (51%)
Query: 440 DIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHYGLATPIYTHFTSPIRRYAD 499
D IV++LL + + A +L ST C +FHHYGLA YTHFTSPIRRY+D
Sbjct: 756 DPIVNKLLRS-MATQAMSNALY---FSTGSCAE--EEFHHYGLALDKYTHFTSPIRRYSD 809
Query: 500 IIVHRLLAACIGADATYP---SLLDKKASTALCYNLPGCTDIDDALHCR 545
IIVHRLL I D +L K LC ++ A HC+
Sbjct: 810 IIVHRLLMEAISKDKKMEIKENLFSNKDLEELCKHINNRNRA--AQHCQ 856
Score = 114 (45.2 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
++ EE +R DLR HL V S+DP GC D+DD L R L NGN+E+
Sbjct: 462 VSSEEERKRKDLRKTHL-VFSIDPRGCEDVDDTLSVRALDNGNLEL 506
Score = 71 (30.1 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 526 TALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
T L +++ P GC D+DD L R L NGN+E+
Sbjct: 476 THLVFSIDPRGCEDVDDTLSVRALDNGNLEL 506
Score = 60 (26.2 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L EL ++N RNR AQ+ + S L ++F+ K EE
Sbjct: 838 LEELCKHINNRNRAAQHCQKQSTELFQCMYFKDKDPDTEE 877
Score = 39 (18.8 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 315 NEVLLLEHDVPHSKF-SDL 332
++ LL +H PH +F S+L
Sbjct: 707 HQALLRQHPPPHQEFFSEL 725
>UNIPROTKB|F1SJJ9 [details] [associations]
symbol:DIS3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
EMBL:CU062652 Ensembl:ENSSSCT00000005453 Uniprot:F1SJJ9
Length = 1057
Score = 266 (98.7 bits), Expect = 4.3e-34, Sum P(4) = 4.3e-34
Identities = 100/376 (26%), Positives = 162/376 (43%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + +F NE Y+ +E GES+ R++ A W+ Y H + +
Sbjct: 103 LRNLLKDARHDCVLFANEFQQSCYLPRERGESMEKWQSRSIYNAAVWF--YH-HCQDRMP 159
Query: 61 VILLSED---VRNRDLATQSGLLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS 111
V++++ED V+ T+ G+ S + Y+ L L + + S++E E+
Sbjct: 160 VVMVTEDEEAVQQYGSETE-GVFVISFKSYLDNFWPDLKAAHELCESIVQSRRERENESQ 218
Query: 112 VKDSL-YPLHATPSEIHAGIKNQSLLQGSFQASR-----ENF--LEG-QVNCEGYDKPIL 162
YP H + AGIK+ +QG ++ E F L+G G IL
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASTKDSGLVSDIL 278
Query: 163 VQGREGLNRAIDGDTVAVRLLPESQWSAPXXXXXXXXXXXXXXXXXXXKLIKGNKTVPPA 222
+ G + NR+I GD V V LLP+++W G P+
Sbjct: 279 IHGMKARNRSIHGDVVVVELLPKNEWKGRTTALGENDGDDKAS---------GES---PS 326
Query: 223 ERRPTGQIVGIIKRKWRQ----YCGILQPNPLAGSS---RHLFVPA-ERKIPKIRVETRQ 274
E PTG ++ W+Q + I P +G+ R + + P+ + + R+
Sbjct: 327 EPMPTGYSDQLVLSPWKQAFPKHPHISFPCFKSGAKSGQRVAYCTRWDYTCPQKKKKERE 386
Query: 275 IATLSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVL 334
R VV IDSW S YP GHFVR LG IGD + E +L+E+ + FS+ +
Sbjct: 387 REREKDFREVVRIDSWESTSMYPNGHFVRVLGRIGDLEGEIATILVENSISVVPFSEAQM 446
Query: 335 SYLP---PM-PWEKST 346
+P P PW+ S+
Sbjct: 447 CEMPVNTPENPWKVSS 462
Score = 179 (68.1 bits), Expect = 4.3e-34, Sum P(4) = 4.3e-34
Identities = 37/72 (51%), Positives = 45/72 (62%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SLL 461
A+YFS+G + +FHHYGLA YTHFTSPIRRY+DIIVHRLL I D +L
Sbjct: 772 ALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMEAISKDKKMEIKENLF 831
Query: 462 DKKASTALCYNL 473
K LC ++
Sbjct: 832 SNKDLEELCKHI 843
Score = 157 (60.3 bits), Expect = 6.6e-30, Sum P(3) = 6.6e-30
Identities = 45/109 (41%), Positives = 56/109 (51%)
Query: 440 DIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHYGLATPIYTHFTSPIRRYAD 499
D IV++LL + + A +L ST C +FHHYGLA YTHFTSPIRRY+D
Sbjct: 754 DPIVNKLLRS-MATQAMSNALY---FSTGSCAE--EEFHHYGLALDKYTHFTSPIRRYSD 807
Query: 500 IIVHRLLAACIGADATYP---SLLDKKASTALCYNLPGCTDIDDALHCR 545
IIVHRLL I D +L K LC ++ A HC+
Sbjct: 808 IIVHRLLMEAISKDKKMEIKENLFSNKDLEELCKHINNRNRA--AQHCQ 854
Score = 114 (45.2 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
++ EE +R DLR HL V S+DP GC D+DD L R L NGN+E+
Sbjct: 460 VSSEEERKRKDLRKTHL-VFSIDPRGCEDVDDTLSVRALDNGNLEL 504
Score = 71 (30.1 bits), Expect = 3.5e-23, Sum P(3) = 3.5e-23
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 526 TALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
T L +++ P GC D+DD L R L NGN+E+
Sbjct: 474 THLVFSIDPRGCEDVDDTLSVRALDNGNLEL 504
Score = 60 (26.2 bits), Expect = 4.3e-34, Sum P(4) = 4.3e-34
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L EL ++N RNR AQ+ + S L ++F+ K EE
Sbjct: 836 LEELCKHINNRNRAAQHCQKQSTELFQCMYFKDKDPDTEE 875
Score = 39 (18.8 bits), Expect = 4.3e-34, Sum P(4) = 4.3e-34
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 315 NEVLLLEHDVPHSKF-SDL 332
++ LL +H PH +F S+L
Sbjct: 705 HQALLRQHPPPHQEFFSEL 723
>MGI|MGI:2442555 [details] [associations]
symbol:Dis3l2 "DIS3 mitotic control homolog (S.
cerevisiae)-like 2" species:10090 "Mus musculus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051306 "mitotic sister chromatid separation"
evidence=ISO] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
MGI:MGI:2442555 GO:GO:0005737 GO:GO:0008285 GO:GO:0051301
GO:GO:0003723 GO:GO:0004527 GO:GO:0004540 GO:GO:0051306
eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 CTD:129563 HOVERGEN:HBG107810
EMBL:AK031180 EMBL:BC036177 IPI:IPI00229771 IPI:IPI00881442
RefSeq:NP_001165628.1 RefSeq:NP_705758.1 UniGene:Mm.389152
ProteinModelPortal:Q8CI75 SMR:Q8CI75 STRING:Q8CI75
PhosphoSite:Q8CI75 PaxDb:Q8CI75 PRIDE:Q8CI75
Ensembl:ENSMUST00000065694 Ensembl:ENSMUST00000168237 GeneID:208718
KEGG:mmu:208718 UCSC:uc007bvu.2 UCSC:uc007bvv.2
HOGENOM:HOG000017705 InParanoid:Q8CI75 OMA:VQKRVYC
OrthoDB:EOG415GCR NextBio:372395 Bgee:Q8CI75 Genevestigator:Q8CI75
Uniprot:Q8CI75
Length = 870
Score = 189 (71.6 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 41/75 (54%), Positives = 48/75 (64%)
Query: 395 TNFILLFLFQAVYFSSGMLQ-QSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGA 453
TN + A+YF SGMLQ Q F HY L P+YTHFTSPIRR+AD+IVHRLLAA +G
Sbjct: 660 TNMYSRPMQMALYFCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALGY 719
Query: 454 DA---TYPSLLDKKA 465
P L K+A
Sbjct: 720 SEQPDVEPDTLQKQA 734
Score = 154 (59.3 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 32/61 (52%), Positives = 39/61 (63%)
Query: 470 CYNLVSD---FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADA---TYPSLLDKK 523
C ++ D F HY L P+YTHFTSPIRR+AD+IVHRLLAA +G P L K+
Sbjct: 674 CSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALGYSEQPDVEPDTLQKQ 733
Query: 524 A 524
A
Sbjct: 734 A 734
Score = 141 (54.7 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 99 DKLSKKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYD 158
DK SK +++ K S++ + + ++ G+K +L+QG + + + F E + D
Sbjct: 34 DKKSKNKSM--RGKKKSIFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGD 91
Query: 159 KPILVQGREGLNRAIDGDTVAVRLLPESQWSA 190
+ I + G NRA++GD V V+LLPE QW A
Sbjct: 92 RDIFIDGVVARNRALNGDLVVVKLLPEDQWKA 123
Score = 102 (41.0 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 227 TGQIVGIIKRKW-RQYCGILQ----PNPLAGSSRHLFVPAERKIPKIRVETRQIAT---- 277
+ ++V I+++K R GIL+ N LF P++ ++P+I V +
Sbjct: 230 SAKVVYILEKKHSRAATGILKLLADKNSDLFKKYALFSPSDHRVPRIYVPLKDCPQDFMT 289
Query: 278 ----LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLV 333
+ + I W + G ++LG G+ + E E +L E+ V S FS V
Sbjct: 290 RPKDFANTLFICRIIDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEV 349
Query: 334 LSYLPP-MPW 342
L LP +PW
Sbjct: 350 LECLPQSLPW 359
Score = 98 (39.6 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+I +EV +R DLR + ++DP D+DDAL CR L +G EV
Sbjct: 360 TIPPDEVGKRRDLRKDCIFTIDPSTARDLDDALACRRLTDGTFEV 404
Score = 57 (25.1 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 537 DIDDALHCRPLPNGNIEV 554
D+DDAL CR L +G EV
Sbjct: 387 DLDDALACRRLTDGTFEV 404
>RGD|1560168 [details] [associations]
symbol:Dis3l2 "DIS3 mitotic control homolog (S. cerevisiae)-like
2" species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007067 "mitosis"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0051306 "mitotic sister chromatid
separation" evidence=ISO] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 RGD:1560168 GO:GO:0005737 GO:GO:0008285 GO:GO:0003723
GO:GO:0004540 GO:GO:0051306 InterPro:IPR022966 PROSITE:PS01175
OrthoDB:EOG415GCR IPI:IPI00950040 Ensembl:ENSRNOT00000066216
UCSC:RGD:1560168 ArrayExpress:D3ZWJ4 Uniprot:D3ZWJ4
Length = 884
Score = 190 (71.9 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 41/75 (54%), Positives = 49/75 (65%)
Query: 395 TNFILLFLFQAVYFSSGMLQ-QSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGA 453
TN + A+YF SGMLQ Q+ F HY L P+YTHFTSPIRR+AD+IVHRLLAA +G
Sbjct: 674 TNMYSRPMQMALYFCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALGY 733
Query: 454 DA---TYPSLLDKKA 465
P L K+A
Sbjct: 734 SEQPDVEPDALQKQA 748
Score = 154 (59.3 bits), Expect = 3.7e-22, Sum P(3) = 3.7e-22
Identities = 32/61 (52%), Positives = 39/61 (63%)
Query: 470 CYNLVSD---FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADA---TYPSLLDKK 523
C ++ D F HY L P+YTHFTSPIRR+AD+IVHRLLAA +G P L K+
Sbjct: 688 CSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALGYSEQPDVEPDALQKQ 747
Query: 524 A 524
A
Sbjct: 748 A 748
Score = 137 (53.3 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 29/90 (32%), Positives = 50/90 (55%)
Query: 99 DKLSKKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYD 158
DK SK +++ K S++ + + ++ G+K +L+QG + + + F E + D
Sbjct: 34 DKKSKNKSM--RGKKKSIFETYMSKEDVSEGLKKGTLIQGVLRINPKKFHEAFIPSPDGD 91
Query: 159 KPILVQGREGLNRAIDGDTVAVRLLPESQW 188
+ I + G NRA++GD V V+LLPE QW
Sbjct: 92 RDIFIDGVVARNRALNGDLVVVKLLPEDQW 121
Score = 103 (41.3 bits), Expect = 8.3e-17, Sum P(3) = 8.3e-17
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+I EEV +R DLR + ++DP D+DDAL CR L +G EV
Sbjct: 374 TIPPEEVGKRRDLRKDCIFTIDPSTARDLDDALSCRQLTDGTFEV 418
Score = 101 (40.6 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 227 TGQIVGIIKRKW-RQYCGILQ----PNPLAGSSRHLFVPAERKIPKIRVETRQIAT---- 277
+ ++V I+++K R GIL+ N LF P++ ++P+I V +
Sbjct: 244 SAKVVYILEKKHSRAATGILKLLADKNSDLFKKYALFSPSDHRVPRIYVPLKDCPQDFMT 303
Query: 278 ----LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLV 333
+ + I W + G ++LG G+ + E E +L E+ V S FS V
Sbjct: 304 RPKDYANTLFICRIIDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEV 363
Query: 334 LSYLPP-MPW 342
L LP +PW
Sbjct: 364 LECLPQSLPW 373
Score = 59 (25.8 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 537 DIDDALHCRPLPNGNIEV 554
D+DDAL CR L +G EV
Sbjct: 401 DLDDALSCRQLTDGTFEV 418
>UNIPROTKB|E2QZ40 [details] [associations]
symbol:DIS3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051306 "mitotic sister chromatid separation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0005737 GO:GO:0008285 GO:GO:0003723
GO:GO:0004540 GO:GO:0051306 InterPro:IPR022966 PROSITE:PS01175
Ensembl:ENSCAFT00000017770 Uniprot:E2QZ40
Length = 870
Score = 183 (69.5 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 39/74 (52%), Positives = 49/74 (66%)
Query: 395 TNFILLFLFQAVYFSSGMLQ-QSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGA 453
TN + A+YF SG+LQ Q+ F HY L P+YTHFTSPIRR+AD++VHRLLAA +G
Sbjct: 660 TNMCSRPMQMALYFCSGVLQDQAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG- 718
Query: 454 DATYPSLLDKKAST 467
Y L D + T
Sbjct: 719 ---YRELPDMEPDT 729
Score = 151 (58.2 bits), Expect = 3.7e-22, Sum P(3) = 3.7e-22
Identities = 34/71 (47%), Positives = 42/71 (59%)
Query: 470 CYNLVSD---FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKAST 526
C ++ D F HY L P+YTHFTSPIRR+AD++VHRLLAA +G Y L D + T
Sbjct: 674 CSGVLQDQAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG----YRELPDMEPDT 729
Query: 527 ALCYNLPGCTD 537
L C D
Sbjct: 730 -LQKQADHCND 739
Score = 136 (52.9 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 71 RDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDSLYPLHATPSEIHAGI 130
R L T G+ SS+ G G DK SK ++ K S++ + + ++ G+
Sbjct: 9 RPLGTPRGV--SSVAGPHGV---GASPGDKKSKNKSA--RGKKKSVFETYMSKEDVSEGL 61
Query: 131 KNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDGDTVAVRLLPESQW 188
K +L+QG + + + F E + D+ I + G NRA++GD V V+LLPE QW
Sbjct: 62 KRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNGDLVVVKLLPEEQW 119
Score = 110 (43.8 bits), Expect = 7.5e-18, Sum P(3) = 7.5e-18
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+I EE ++R DLR + ++DP D+DDAL C+PL +GN EV
Sbjct: 360 TIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEV 404
Score = 105 (42.0 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 257 LFVPAERKIPKIRVETRQ----IAT----LSGQRIVVAIDSWPRHSRYPQGHFVRALGPI 308
LF P++ ++P+I V + T + + I W S + G ++LG
Sbjct: 265 LFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANTLFICRIVDWKEDSNFALGQLAKSLGQA 324
Query: 309 GDKDTENEVLLLEHDVPHSKFSDLVLSYLPP-MPW 342
G+ + E E +L E+ V S FS VL LP +PW
Sbjct: 325 GEIEPETEGILTEYGVDFSDFSSEVLDCLPQGLPW 359
Score = 70 (29.7 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 537 DIDDALHCRPLPNGNIEV 554
D+DDAL C+PL +GN EV
Sbjct: 387 DLDDALSCKPLADGNFEV 404
>UNIPROTKB|F6XKS7 [details] [associations]
symbol:DIS3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
CTD:129563 OMA:VQKRVYC EMBL:AAEX03014445 Ensembl:ENSCAFT00000017770
EMBL:AAEX03014441 EMBL:AAEX03014442 EMBL:AAEX03014443
EMBL:AAEX03014444 RefSeq:XP_852722.1 ProteinModelPortal:F6XKS7
GeneID:610194 KEGG:cfa:610194 Uniprot:F6XKS7
Length = 879
Score = 183 (69.5 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 39/74 (52%), Positives = 49/74 (66%)
Query: 395 TNFILLFLFQAVYFSSGMLQ-QSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGA 453
TN + A+YF SG+LQ Q+ F HY L P+YTHFTSPIRR+AD++VHRLLAA +G
Sbjct: 660 TNMCSRPMQMALYFCSGVLQDQAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG- 718
Query: 454 DATYPSLLDKKAST 467
Y L D + T
Sbjct: 719 ---YRELPDMEPDT 729
Score = 151 (58.2 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 34/71 (47%), Positives = 42/71 (59%)
Query: 470 CYNLVSD---FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKAST 526
C ++ D F HY L P+YTHFTSPIRR+AD++VHRLLAA +G Y L D + T
Sbjct: 674 CSGVLQDQAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG----YRELPDMEPDT 729
Query: 527 ALCYNLPGCTD 537
L C D
Sbjct: 730 -LQKQADHCND 739
Score = 136 (52.9 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 71 RDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDSLYPLHATPSEIHAGI 130
R L T G+ SS+ G G DK SK ++ K S++ + + ++ G+
Sbjct: 9 RPLGTPRGV--SSVAGPHGV---GASPGDKKSKNKSA--RGKKKSVFETYMSKEDVSEGL 61
Query: 131 KNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDGDTVAVRLLPESQW 188
K +L+QG + + + F E + D+ I + G NRA++GD V V+LLPE QW
Sbjct: 62 KRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNGDLVVVKLLPEEQW 119
Score = 110 (43.8 bits), Expect = 7.7e-18, Sum P(3) = 7.7e-18
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+I EE ++R DLR + ++DP D+DDAL C+PL +GN EV
Sbjct: 360 TIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEV 404
Score = 105 (42.0 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 257 LFVPAERKIPKIRVETRQ----IAT----LSGQRIVVAIDSWPRHSRYPQGHFVRALGPI 308
LF P++ ++P+I V + T + + I W S + G ++LG
Sbjct: 265 LFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANTLFICRIVDWKEDSNFALGQLAKSLGQA 324
Query: 309 GDKDTENEVLLLEHDVPHSKFSDLVLSYLPP-MPW 342
G+ + E E +L E+ V S FS VL LP +PW
Sbjct: 325 GEIEPETEGILTEYGVDFSDFSSEVLDCLPQGLPW 359
Score = 70 (29.7 bits), Expect = 9.4e-14, Sum P(3) = 9.4e-14
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 537 DIDDALHCRPLPNGNIEV 554
D+DDAL C+PL +GN EV
Sbjct: 387 DLDDALSCKPLADGNFEV 404
>GENEDB_PFALCIPARUM|MAL13P1.289 [details] [associations]
symbol:MAL13P1.289 "mitotic control protein
dis3 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0004527 "exonuclease activity" evidence=ISS] [GO:0000178
"exosome (RNase complex)" evidence=ISS] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004527
GO:GO:0000178 GO:GO:0004540 EMBL:AL844509 InterPro:IPR022966
PROSITE:PS01175 KO:K12585 RefSeq:XP_001350300.2
EnsemblProtists:MAL13P1.289:mRNA GeneID:813851 KEGG:pfa:MAL13P1.289
EuPathDB:PlasmoDB:PF3D7_1359300 HOGENOM:HOG000281701
ProtClustDB:CLSZ2515355 Uniprot:Q8IDB6
Length = 1073
Score = 170 (64.9 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 41/119 (34%), Positives = 66/119 (55%)
Query: 228 GQIVGIIKRKWRQYCGILQP--NPLAGSSRHL-FVPA-ERKIPKIRVETRQIATLSGQRI 283
G++VGII R ++Y GI++ N L + L F A KIP I ++ + L +R+
Sbjct: 467 GKVVGIISRCRKEYGGIIKEYSNNLNNIKKKLMFFKAFNNKIPYIMIKAQLEDELRNKRV 526
Query: 284 VVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
+V ID+W +SR P G + LG D +TE +++ E+++ +FS+ V LPP W
Sbjct: 527 IVTIDNWDIYSRNPLGRCISVLGNCDDIETETKLIYNEYNISTREFSENVYKCLPPNNW 585
Score = 135 (52.6 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 404 QAVYFSSGMLQQSDF-HHYGLATPIYTHFTSPIRRYADIIVHRLL 447
+AV+ S + +D HYGLA IYT FTSPIRRYADI+VHR+L
Sbjct: 888 EAVFISGYNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHRIL 932
Score = 126 (49.4 bits), Expect = 8.0e-24, Sum P(5) = 8.0e-24
Identities = 25/38 (65%), Positives = 30/38 (78%)
Query: 471 YNLVSD--FHHYGLATPIYTHFTSPIRRYADIIVHRLL 506
YN+ ++ HYGLA IYT FTSPIRRYADI+VHR+L
Sbjct: 895 YNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHRIL 932
Score = 113 (44.8 bits), Expect = 2.9e-21, Sum P(4) = 2.9e-21
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 607 ITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLP-NGNIEVTY 652
I +EE +R D R++ S+DPPGC DIDDAL L +GNIE Y
Sbjct: 587 IPDEEYEKRNDFRNVLTFSIDPPGCQDIDDALSVEFLQQDGNIEKNY 633
Score = 81 (33.6 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 113 KDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRA 172
K LY H + S++ ++ +++G F N L V D+ I+++G + +NRA
Sbjct: 278 KRPLYEPHLSKSDMIQKLRENKIIKGVFSVICVNKL-ALVKFSDVDE-IVIRGTKYMNRA 335
Query: 173 IDGDTVAVRLLPE 185
I D VAV ++ E
Sbjct: 336 IHNDVVAVEIIDE 348
Score = 70 (29.7 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 486 IYTHFTSPIRRYADIIVHRLLAA--CIGADATYPSLLDKKASTALCYNLPGCTDIDDALH 543
IY + R +++ V++ L + D Y D + + PGC DIDDAL
Sbjct: 561 IYNEYNISTREFSEN-VYKCLPPNNWVIPDEEYEKRNDFRNVLTFSIDPPGCQDIDDALS 619
Query: 544 CRPLP-NGNIEVTY 556
L +GNIE Y
Sbjct: 620 VEFLQQDGNIEKNY 633
Score = 64 (27.6 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 7 NPSRKFYVFVNEHHYETYVEQEPGESVNDRND-RALRRVATWYVKYEEHLESAVRVI--- 62
N +++F VFVN TYVE ++ + + + ++ W + L ++VI
Sbjct: 132 NHNKRFCVFVNTFCKFTYVEDNKDDTNGFNKELQEIIKIVIWLKHHNNKLN--IKVISNN 189
Query: 63 -LLSEDVRNRDL 73
LL ED N D+
Sbjct: 190 KLLQEDCYNNDI 201
Score = 52 (23.4 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 579 LNYRNRQAQYAGRASVALHTHLFFRR 604
LN + R A++A RASV ++L+ ++
Sbjct: 958 LNDKYRNARFASRASVDFFSYLYIKK 983
>UNIPROTKB|Q8IDB6 [details] [associations]
symbol:MAL13P1.289 "Mitotic control protein dis3 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000178
"exosome (RNase complex)" evidence=ISS] [GO:0004527 "exonuclease
activity" evidence=ISS] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0003723 GO:GO:0004527 GO:GO:0000178
GO:GO:0004540 EMBL:AL844509 InterPro:IPR022966 PROSITE:PS01175
KO:K12585 RefSeq:XP_001350300.2 EnsemblProtists:MAL13P1.289:mRNA
GeneID:813851 KEGG:pfa:MAL13P1.289 EuPathDB:PlasmoDB:PF3D7_1359300
HOGENOM:HOG000281701 ProtClustDB:CLSZ2515355 Uniprot:Q8IDB6
Length = 1073
Score = 170 (64.9 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 41/119 (34%), Positives = 66/119 (55%)
Query: 228 GQIVGIIKRKWRQYCGILQP--NPLAGSSRHL-FVPA-ERKIPKIRVETRQIATLSGQRI 283
G++VGII R ++Y GI++ N L + L F A KIP I ++ + L +R+
Sbjct: 467 GKVVGIISRCRKEYGGIIKEYSNNLNNIKKKLMFFKAFNNKIPYIMIKAQLEDELRNKRV 526
Query: 284 VVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
+V ID+W +SR P G + LG D +TE +++ E+++ +FS+ V LPP W
Sbjct: 527 IVTIDNWDIYSRNPLGRCISVLGNCDDIETETKLIYNEYNISTREFSENVYKCLPPNNW 585
Score = 135 (52.6 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 404 QAVYFSSGMLQQSDF-HHYGLATPIYTHFTSPIRRYADIIVHRLL 447
+AV+ S + +D HYGLA IYT FTSPIRRYADI+VHR+L
Sbjct: 888 EAVFISGYNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHRIL 932
Score = 126 (49.4 bits), Expect = 8.0e-24, Sum P(5) = 8.0e-24
Identities = 25/38 (65%), Positives = 30/38 (78%)
Query: 471 YNLVSD--FHHYGLATPIYTHFTSPIRRYADIIVHRLL 506
YN+ ++ HYGLA IYT FTSPIRRYADI+VHR+L
Sbjct: 895 YNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHRIL 932
Score = 113 (44.8 bits), Expect = 2.9e-21, Sum P(4) = 2.9e-21
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 607 ITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLP-NGNIEVTY 652
I +EE +R D R++ S+DPPGC DIDDAL L +GNIE Y
Sbjct: 587 IPDEEYEKRNDFRNVLTFSIDPPGCQDIDDALSVEFLQQDGNIEKNY 633
Score = 81 (33.6 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 113 KDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRA 172
K LY H + S++ ++ +++G F N L V D+ I+++G + +NRA
Sbjct: 278 KRPLYEPHLSKSDMIQKLRENKIIKGVFSVICVNKL-ALVKFSDVDE-IVIRGTKYMNRA 335
Query: 173 IDGDTVAVRLLPE 185
I D VAV ++ E
Sbjct: 336 IHNDVVAVEIIDE 348
Score = 70 (29.7 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 486 IYTHFTSPIRRYADIIVHRLLAA--CIGADATYPSLLDKKASTALCYNLPGCTDIDDALH 543
IY + R +++ V++ L + D Y D + + PGC DIDDAL
Sbjct: 561 IYNEYNISTREFSEN-VYKCLPPNNWVIPDEEYEKRNDFRNVLTFSIDPPGCQDIDDALS 619
Query: 544 CRPLP-NGNIEVTY 556
L +GNIE Y
Sbjct: 620 VEFLQQDGNIEKNY 633
Score = 64 (27.6 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 7 NPSRKFYVFVNEHHYETYVEQEPGESVNDRND-RALRRVATWYVKYEEHLESAVRVI--- 62
N +++F VFVN TYVE ++ + + + ++ W + L ++VI
Sbjct: 132 NHNKRFCVFVNTFCKFTYVEDNKDDTNGFNKELQEIIKIVIWLKHHNNKLN--IKVISNN 189
Query: 63 -LLSEDVRNRDL 73
LL ED N D+
Sbjct: 190 KLLQEDCYNNDI 201
Score = 52 (23.4 bits), Expect = 9.9e-25, Sum P(5) = 9.9e-25
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 579 LNYRNRQAQYAGRASVALHTHLFFRR 604
LN + R A++A RASV ++L+ ++
Sbjct: 958 LNDKYRNARFASRASVDFFSYLYIKK 983
>UNIPROTKB|E1B7R0 [details] [associations]
symbol:DIS3L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051306 "mitotic sister chromatid separation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0005737 GO:GO:0008285 GO:GO:0003723
GO:GO:0004540 GO:GO:0051306 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 CTD:129563 OMA:VQKRVYC
EMBL:DAAA02006206 EMBL:DAAA02006207 EMBL:DAAA02006208
IPI:IPI00693579 RefSeq:NP_001179435.1 UniGene:Bt.54653
ProteinModelPortal:E1B7R0 Ensembl:ENSBTAT00000038112 GeneID:519222
KEGG:bta:519222 NextBio:20872834 Uniprot:E1B7R0
Length = 882
Score = 171 (65.3 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 33/59 (55%), Positives = 42/59 (71%)
Query: 395 TNFILLFLFQAVYFSSGMLQQ-SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 452
TN + AVYF SG L+ + F HY L P+YTHFTSPIRR+AD++VHRLLA+ +G
Sbjct: 662 TNMCSRPMQMAVYFCSGALRDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLASALG 720
Score = 145 (56.1 bits), Expect = 8.6e-22, Sum P(3) = 8.6e-22
Identities = 24/37 (64%), Positives = 31/37 (83%)
Query: 475 SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 511
+ F HY L P+YTHFTSPIRR+AD++VHRLLA+ +G
Sbjct: 684 AQFRHYALNVPLYTHFTSPIRRFADVLVHRLLASALG 720
Score = 135 (52.6 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 99 DKLSKKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYD 158
DK SK + K S++ + + ++ G+K +L+QG + + + F E + D
Sbjct: 34 DKKSKSKTT--RGKKKSIFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGD 91
Query: 159 KPILVQGREGLNRAIDGDTVAVRLLPESQW 188
+ I + G NRA++GD V V+LLPE QW
Sbjct: 92 RDIFIDGVVARNRALNGDLVVVKLLPEEQW 121
Score = 109 (43.4 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 36/141 (25%), Positives = 63/141 (44%)
Query: 216 NKTVPPAERRPTGQIVGIIKRKW-RQYCGILQ----PNPLAGSSRHLFVPAERKIPKIRV 270
++ +P + + ++V I+++K R G L+ N LF P++ ++P+I V
Sbjct: 221 SRVLPEKSLQRSAKVVYILEKKHSRAATGFLKLLADKNSELFRKYALFSPSDHRVPRIYV 280
Query: 271 ETRQ----IAT----LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEH 322
+ T + + I W S + G ++LG G+ + E E +L E+
Sbjct: 281 PLKDCPQDFVTRPKDYANTLFICRIMDWKEDSNFALGQLAKSLGQAGEIEPETEGILTEY 340
Query: 323 DVPHSKFSDLVLSYLPP-MPW 342
V S FS VL LP +PW
Sbjct: 341 GVDFSDFSSEVLECLPQGLPW 361
Score = 105 (42.0 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+I EE +RR DLR + ++DP D+DDAL C+ L +GN EV
Sbjct: 362 TIPPEEFSRRRDLRKDCIFTIDPSTARDLDDALSCKSLADGNFEV 406
Score = 62 (26.9 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 537 DIDDALHCRPLPNGNIEV 554
D+DDAL C+ L +GN EV
Sbjct: 389 DLDDALSCKSLADGNFEV 406
>UNIPROTKB|Q8IYB7 [details] [associations]
symbol:DIS3L2 "DIS3-like exonuclease 2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0051306 "mitotic sister
chromatid separation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0005737 GO:GO:0008285 GO:GO:0051301
GO:GO:0003723 GO:GO:0004527 GO:GO:0004540 Orphanet:654
GO:GO:0051306 eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
EMBL:AK094293 EMBL:AL834174 EMBL:BX648325 EMBL:AF443854
EMBL:AC019130 EMBL:AC068134 EMBL:AC093374 EMBL:AC138658
EMBL:BC026166 EMBL:BC036113 IPI:IPI00167753 IPI:IPI00217752
IPI:IPI00385160 IPI:IPI00465384 IPI:IPI00880048
RefSeq:NP_001244210.1 RefSeq:NP_001244211.1 RefSeq:NP_689596.4
UniGene:Hs.732236 ProteinModelPortal:Q8IYB7 IntAct:Q8IYB7
MINT:MINT-1386910 STRING:Q8IYB7 PhosphoSite:Q8IYB7 DMDM:296439471
PaxDb:Q8IYB7 PRIDE:Q8IYB7 DNASU:129563 Ensembl:ENST00000273009
Ensembl:ENST00000325385 Ensembl:ENST00000360410
Ensembl:ENST00000390005 Ensembl:ENST00000409307
Ensembl:ENST00000409401 Ensembl:ENST00000433430
Ensembl:ENST00000445090 GeneID:129563 KEGG:hsa:129563
UCSC:uc010fxz.3 CTD:129563 GeneCards:GC02P232825 H-InvDB:HIX0002923
HGNC:HGNC:28648 HPA:HPA035797 MIM:267000 MIM:614184
neXtProt:NX_Q8IYB7 Orphanet:2849 PharmGKB:PA162383714
HOVERGEN:HBG107810 InParanoid:Q8IYB7 OMA:HIYEYRE ChiTaRS:DIS3L2
GenomeRNAi:129563 NextBio:82609 ArrayExpress:Q8IYB7 Bgee:Q8IYB7
CleanEx:HS_DIS3L2 Genevestigator:Q8IYB7 Uniprot:Q8IYB7
Length = 885
Score = 178 (67.7 bits), Expect = 4.6e-24, Sum P(3) = 4.6e-24
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 395 TNFILLFLFQAVYFSSGMLQQ-SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 452
TN + A+YF SG+LQ + F HY L P+YTHFTSPIRR+AD++VHRLLAA +G
Sbjct: 662 TNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG 720
Score = 153 (58.9 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 35/71 (49%), Positives = 41/71 (57%)
Query: 470 CYNLVSD---FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKAST 526
C L+ D F HY L P+YTHFTSPIRR+AD++VHRLLAA +G Y LD T
Sbjct: 676 CSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG----YRERLDMAPDT 731
Query: 527 ALCYNLPGCTD 537
L C D
Sbjct: 732 -LQKQADHCND 741
Score = 130 (50.8 bits), Expect = 4.6e-24, Sum P(3) = 4.6e-24
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 99 DKLSKKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYD 158
DK SK + K S++ + + ++ G+K +L+QG + + + F E + D
Sbjct: 34 DKKSKNRST--RGKKKSIFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGD 91
Query: 159 KPILVQGREGLNRAIDGDTVAVRLLPESQW 188
+ I + G NRA++GD V V+LLPE W
Sbjct: 92 RDIFIDGVVARNRALNGDLVVVKLLPEEHW 121
Score = 106 (42.4 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+I EE ++R DLR + ++DP D+DDAL C+PL +GN +V
Sbjct: 362 TIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKV 406
Score = 101 (40.6 bits), Expect = 4.6e-24, Sum P(3) = 4.6e-24
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 257 LFVPAERKIPKIRVETRQ-----IAT---LSGQRIVVAIDSWPRHSRYPQGHFVRALGPI 308
LF P++ ++P+I V + +A + + I W + G ++LG
Sbjct: 267 LFSPSDHRVPRIYVPLKDCPQDFVARPKDYANTLFICRIVDWKEDCNFALGQLAKSLGQA 326
Query: 309 GDKDTENEVLLLEHDVPHSKFSDLVLSYLPP-MPW 342
G+ + E E +L E+ V S FS VL LP +PW
Sbjct: 327 GEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPW 361
Score = 66 (28.3 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 537 DIDDALHCRPLPNGNIEV 554
D+DDAL C+PL +GN +V
Sbjct: 389 DLDDALSCKPLADGNFKV 406
Score = 39 (18.8 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 357 GLSQISTGVISVGLEQGFPSLLKPRTTFVFYD 388
G+ ++S V G E G + K TT + D
Sbjct: 189 GVKKLSVCVSEKGREDGDAPVTKDETTCISQD 220
>ZFIN|ZDB-GENE-070705-171 [details] [associations]
symbol:si:ch211-273k1.4 "si:ch211-273k1.4"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
ZFIN:ZDB-GENE-070705-171 GO:GO:0003723 GO:GO:0004540
InterPro:IPR022966 PROSITE:PS01175 GeneTree:ENSGT00530000063106
EMBL:BX001029 IPI:IPI00499069 Ensembl:ENSDART00000083272
Uniprot:E7F350
Length = 995
Score = 163 (62.4 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 31/48 (64%), Positives = 36/48 (75%)
Query: 405 AVYFSSGMLQQSD-FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACI 451
AVYF +G L+ F HY L P+YTHFTSPIRRYAD+IVHRLL A +
Sbjct: 802 AVYFCAGALKDEKLFRHYALNVPLYTHFTSPIRRYADVIVHRLLGASL 849
Score = 142 (55.0 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 477 FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACI 510
F HY L P+YTHFTSPIRRYAD+IVHRLL A +
Sbjct: 816 FRHYALNVPLYTHFTSPIRRYADVIVHRLLGASL 849
Score = 131 (51.2 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 38/140 (27%), Positives = 67/140 (47%)
Query: 216 NKTVPPAER--RPTGQIVGIIKRKW-RQYCGILQPNPLAGSSRH-LFVPAERKIPKIRVE 271
N +ER + G++V I+++K R G L+ P + R +F P + ++P++ V
Sbjct: 355 NTPASSSERTTQKNGKVVFIVEKKHSRAVSGFLKFLP---NKRFAMFSPVDHRVPRVNVP 411
Query: 272 --------TRQIATLSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHD 323
T + + I WP S + +G + LG G+ + E E +L E+
Sbjct: 412 LADCPADFTSRPGDYENTLFICRITQWPADSNFAEGRLAKTLGQAGEIEPETEGILTEYG 471
Query: 324 VPHSKFSDLVLSYLPP-MPW 342
V S+F++ VL+ LP +PW
Sbjct: 472 VDFSEFTEEVLNCLPQDLPW 491
Score = 100 (40.3 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 606 SITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SI E++ R DLR + ++DP D+DDAL C+ L +GN EV
Sbjct: 492 SIPAHELSTRRDLRKECIFTIDPATARDLDDALSCKQLSDGNFEV 536
Score = 94 (38.1 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 116 LYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDG 175
++ + + ++ AG+K L+QG + + + + E + I + G NRA++G
Sbjct: 236 VFEQYMSVEDVSAGLKRGELIQGVLRINPKKYKEAYIPSPDGSADIFLDGISARNRALNG 295
Query: 176 DTVAVRLLPESQWSA 190
D V V++LP Q A
Sbjct: 296 DVVVVKVLPLEQSQA 310
Score = 62 (26.9 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 537 DIDDALHCRPLPNGNIEV 554
D+DDAL C+ L +GN EV
Sbjct: 519 DLDDALSCKQLSDGNFEV 536
>UNIPROTKB|E1C372 [details] [associations]
symbol:DIS3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0051306 "mitotic sister chromatid
separation" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 GO:GO:0005737 GO:GO:0008285 GO:GO:0003723
GO:GO:0004540 GO:GO:0051306 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 OMA:VQKRVYC EMBL:AADN02020657
EMBL:AADN02020658 EMBL:AADN02020659 EMBL:AADN02020660
EMBL:AADN02020661 EMBL:AADN02020662 EMBL:AADN02020663
IPI:IPI00578279 Ensembl:ENSGALT00000012599 Uniprot:E1C372
Length = 875
Score = 179 (68.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 55/180 (30%), Positives = 83/180 (46%)
Query: 292 RHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHS---KFSDLVLSYLPPMPWEKSTG- 347
+ S PQG ++ +K E +LL V H F + L P P K
Sbjct: 565 QESGMPQGCYIYQYRD-SNKLVEEFMLLANMAVAHQIYRSFPEQALLRRHPPPQSKLLND 623
Query: 348 -RPWCSGTSIGLSQISTGVISVGLEQGFPSLLKPRTTFVFYDFPRTTRTNFILLFLFQAV 406
+C + + S G + L + F + + + + TN + A+
Sbjct: 624 LMEFCHQVGLEIDFSSAGSLHKSLNETFGA-------DKYSEARKEVLTNMFSRPMQMAL 676
Query: 407 YFSSGMLQQSD-FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKA 465
YF +G+L+ F HY L P YTHFTSPIRRYAD++VHRLL+A +G + P ++K+A
Sbjct: 677 YFCTGVLKDETLFRHYALNVPFYTHFTSPIRRYADVVVHRLLSASLGISS--PIKMEKEA 734
Score = 154 (59.3 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 470 CYNLVSD---FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKA 524
C ++ D F HY L P YTHFTSPIRRYAD++VHRLL+A +G + P ++K+A
Sbjct: 679 CTGVLKDETLFRHYALNVPFYTHFTSPIRRYADVVVHRLLSASLGISS--PIKMEKEA 734
Score = 123 (48.4 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 113 KDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRA 172
K S++ + + ++ AG+K L+QG + + + + E + + I + G NRA
Sbjct: 46 KKSIFEAYMSKEDVSAGLKRGELIQGPLRINPKKYHEAFIPSPDGTRDIFIDGVVARNRA 105
Query: 173 IDGDTVAVRLLPESQW 188
++GD V VRLLP QW
Sbjct: 106 LNGDIVVVRLLPREQW 121
Score = 110 (43.8 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 607 ITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
I+ E+A+R DLR + ++DP D+DDAL C+ LP+GN EV
Sbjct: 366 ISPGEMAKRRDLRKECIFTIDPSTAKDLDDALSCKQLPDGNFEV 409
Score = 105 (42.0 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 36/145 (24%), Positives = 60/145 (41%)
Query: 217 KTVPPAERRPTGQIVGIIKRKW-RQYCGILQ----PNPLAGSSRHLFVPAERKIPKIRVE 271
K +P + T ++V I+++K R G ++ N +F P + ++P+ V
Sbjct: 225 KLLPDKFLQRTAKVVYILEKKHSRAATGFIKLLADKNSELFKKCAMFSPVDHRVPRAYVS 284
Query: 272 TRQIAT--------LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHD 323
+ S + I W S + G ++LG G+ + E E +L E+
Sbjct: 285 LADCPSDFVARPEDYSNMLFICRIVDWKEDSNFASGQLAKSLGQAGEIEPETEGILTEYG 344
Query: 324 VPHSKFSDLVLSYLPP-MPWEKSTG 347
V S FS L LP +PW S G
Sbjct: 345 VDFSDFSPEALECLPQGLPWVISPG 369
Score = 70 (29.7 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 537 DIDDALHCRPLPNGNIEV 554
D+DDAL C+ LP+GN EV
Sbjct: 392 DLDDALSCKQLPDGNFEV 409
>WB|WBGene00018612 [details] [associations]
symbol:F48E8.6 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 EMBL:FO081421 GO:GO:0003723 GO:GO:0090305
GO:GO:0004540 eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
GeneTree:ENSGT00530000063106 OMA:HIYEYRE HOGENOM:HOG000017705
PIR:T16409 RefSeq:NP_498160.2 ProteinModelPortal:Q09568 SMR:Q09568
STRING:Q09568 PaxDb:Q09568 EnsemblMetazoa:F48E8.6 GeneID:175748
KEGG:cel:CELE_F48E8.6 UCSC:F48E8.6 CTD:175748 WormBase:F48E8.6
InParanoid:Q09568 NextBio:889474 Uniprot:Q09568
Length = 848
Score = 145 (56.1 bits), Expect = 6.3e-21, Sum P(3) = 6.3e-21
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 404 QAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 452
QA YF + + S +HH+ L YTHFTSPIRRY D+IVHR LAA +G
Sbjct: 638 QAKYFCTFEMPLSFYHHFALNVDHYTHFTSPIRRYPDVIVHRQLAAALG 686
Score = 138 (53.6 bits), Expect = 6.3e-21, Sum P(3) = 6.3e-21
Identities = 38/120 (31%), Positives = 58/120 (48%)
Query: 228 GQIVGIIKRK-WRQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQI------ATLSG 280
G IV I+++K +R G LQ P + + LFV + ++P+I + +
Sbjct: 197 GAIVHILEKKHFRVAAGKLQLMPNSANPNVLFVATDSRVPRILIPKSDVDKEFFSRPKDF 256
Query: 281 QRIVVA--IDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP 338
+R + I W S Y G V+ LG G+ DTE E ++ EH + H +FSD L LP
Sbjct: 257 ERFLYTAKITDWRAESVYADGRLVKLLGMSGEIDTETERIVYEHQIDHREFSDECLESLP 316
Score = 132 (51.5 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 474 VSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 511
+S +HH+ L YTHFTSPIRRY D+IVHR LAA +G
Sbjct: 649 LSFYHHFALNVDHYTHFTSPIRRYPDVIVHRQLAAALG 686
Score = 97 (39.2 bits), Expect = 6.3e-21, Sum P(3) = 6.3e-21
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 116 LYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNC-EGYDKP-ILVQGREGLNRAI 173
++ + + E AGI++ S+ +G + + +N+ E ++ +G + P +LV G++ NRA+
Sbjct: 64 IFTEYISKEETDAGIEDGSMFKGVLRINPKNYQECFLDHPKGTNHPDVLVLGQDR-NRAM 122
Query: 174 DGDTVAVRLLPESQW 188
GD VAV++ P+ W
Sbjct: 123 QGDVVAVKIKPKEDW 137
Score = 64 (27.6 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 607 ITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCR 641
+ + E R D R V ++DP D+DDALH +
Sbjct: 325 VPDAEFEYRRDFRSDIVFTIDPKTARDLDDALHAK 359
Score = 44 (20.5 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 513 DATYPSLLDKKASTALCYNLPGCTDIDDALHCRPLPNGNIEVTYPSLGMSQSCKDIQACL 572
DA + D ++ + D+DDALH + + + + + T P L + D+ L
Sbjct: 327 DAEFEYRRDFRSDIVFTIDPKTARDLDDALHAKHIDDCDGKGT-PGLEIGVHIADVTFFL 385
Query: 573 LE 574
E
Sbjct: 386 KE 387
>POMBASE|SPAC2C4.07c [details] [associations]
symbol:SPAC2C4.07c "ribonuclease II (RNB) family
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISM] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004540 "ribonuclease activity" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006401 "RNA catabolic process" evidence=ISM]
[GO:0033554 "cellular response to stress" evidence=IEP]
InterPro:IPR001900 Pfam:PF00773 PROSITE:PS50126 SMART:SM00955
PomBase:SPAC2C4.07c GO:GO:0005829 EMBL:CU329670 GO:GO:0033554
GO:GO:0003723 GO:GO:0006401 GO:GO:0004527 GO:GO:0004540
eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175 EMBL:AB027825
PIR:T38518 RefSeq:NP_594510.1 ProteinModelPortal:O14040
STRING:O14040 EnsemblFungi:SPAC2C4.07c.1 GeneID:2542643
KEGG:spo:SPAC2C4.07c OMA:WIISHEE OrthoDB:EOG4MGWGN NextBio:20803692
Uniprot:O14040
Length = 927
Score = 150 (57.9 bits), Expect = 4.5e-19, Sum P(3) = 4.5e-19
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 396 NFILLFLFQAVYFSSGML-QQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGAD 454
N + L +A YF +G +++D+HHY L+ YTHFTSPIRRY DIIVHRLL +
Sbjct: 729 NMAVRSLNRAEYFCTGDFGEKTDWHHYALSFNHYTHFTSPIRRYPDIIVHRLLERSL--K 786
Query: 455 ATYPSLLDKK 464
T P + DKK
Sbjct: 787 NTSPGI-DKK 795
Score = 141 (54.7 bits), Expect = 4.5e-19, Sum P(3) = 4.5e-19
Identities = 35/102 (34%), Positives = 51/102 (50%)
Query: 253 SSRHLFVPAERKIPKIRVETRQIATLSGQRIV------------VAIDSWPRHSRYPQGH 300
SS +F+P ++++P I + ++ LSG+ + V I W +SRYP G
Sbjct: 330 SSYAIFIPKDKRLPFITIHKNDLSDLSGENWIENILKHHDQLFSVEITRWSIYSRYPMGV 389
Query: 301 FVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPW 342
LG I D + LLLE+ + S FSD VL+ LPP W
Sbjct: 390 LGEKLGNITDVEAYTNALLLENGISSSPFSDEVLNCLPPDDW 431
Score = 134 (52.2 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 475 SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKK 523
+D+HHY L+ YTHFTSPIRRY DIIVHRLL + T P + DKK
Sbjct: 750 TDWHHYALSFNHYTHFTSPIRRYPDIIVHRLLERSL--KNTSPGI-DKK 795
Score = 107 (42.7 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 607 ITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
I+ EE+ +R DLR+ + ++DP D+DDA+ CR L NG EV
Sbjct: 433 ISHEEIKKRRDLRNELIITIDPETARDLDDAVSCRALDNGTYEV 476
Score = 72 (30.4 bits), Expect = 4.5e-19, Sum P(3) = 4.5e-19
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 107 VVETSVKDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKP-ILVQG 165
+V ++ K S+YPL+ + + G+K+ +L +G+ + EN E D P V G
Sbjct: 166 MVSSNAKKSVYPLYYDSATVKKGLKSGTLFKGTLRIL-ENHRSAFACME--DIPDFYVDG 222
Query: 166 REGLNRAIDGDTVAV 180
NRA D V V
Sbjct: 223 PIARNRAFHNDVVIV 237
Score = 60 (26.2 bits), Expect = 7.5e-10, Sum P(3) = 7.5e-10
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 537 DIDDALHCRPLPNGNIEV 554
D+DDA+ CR L NG EV
Sbjct: 459 DLDDAVSCRALDNGTYEV 476
>UNIPROTKB|F1PK78 [details] [associations]
symbol:DIS3L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 GO:GO:0004540 OMA:IPRFGIK
GeneTree:ENSGT00530000063106 EMBL:AAEX03016225
Ensembl:ENSCAFT00000027369 Uniprot:F1PK78
Length = 1024
Score = 178 (67.7 bits), Expect = 8.6e-18, Sum P(4) = 8.6e-18
Identities = 38/73 (52%), Positives = 47/73 (64%)
Query: 405 AVYFSSGMLQQSDFHHY-GLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP---SL 460
A+YFS+G + +FHHY GLA YTHFTSPIRRY+DI+VHRLL A I D +L
Sbjct: 738 ALYFSTGSCAEEEFHHYEGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKDNL 797
Query: 461 LDKKASTALCYNL 473
L K LC ++
Sbjct: 798 LSNKDLEELCRHI 810
Score = 158 (60.7 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 44/97 (45%), Positives = 54/97 (55%)
Query: 440 DIIVHRLLAACIGADATYPSLLDKKASTALCYNLVSDFHHY-GLATPIYTHFTSPIRRYA 498
D IV+RLL + + A +L ST C +FHHY GLA YTHFTSPIRRY+
Sbjct: 720 DPIVNRLLRS-MATQAMSNALY---FSTGSCAE--EEFHHYEGLALDKYTHFTSPIRRYS 773
Query: 499 DIIVHRLLAACIGADATYP---SLLDKKASTALCYNL 532
DI+VHRLL A I D +LL K LC ++
Sbjct: 774 DIVVHRLLMAAISKDKKMEIKDNLLSNKDLEELCRHI 810
Score = 113 (44.8 bits), Expect = 8.6e-18, Sum P(4) = 8.6e-18
Identities = 39/167 (23%), Positives = 73/167 (43%)
Query: 1 LKDLISNPSRKFYVFVNEHHYETYVEQEPGESVNDRNDRALRRVATWYVKYEEHLESAVR 60
L++L+ + +F NE Y+ +E GES+ R++ A WY Y H + +
Sbjct: 103 LRNLLKDARHDCILFANEFQQYCYLPRERGESMEKWQTRSIYNAAVWY--YH-HCQDRMP 159
Query: 61 VILLSED---VRNRDLATQSGLLTSSIEGYIST----LSNGEPLLDKL--SKKEAVVETS 111
+++++ED ++ T+ G+ S + Y+ L L D + S++E E+
Sbjct: 160 IVMVTEDEEAIQQYGSETE-GVFVISFKNYLDNFWPDLKAAHELCDSILQSRRERENESQ 218
Query: 112 VKDSL-YPLHATPSEIHAGIKNQSLLQGSFQASRENF-LEGQVNCEG 156
Y H + AGIK+ +QG ++ +E V +G
Sbjct: 219 ESHGKEYAEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQG 265
Score = 107 (42.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 607 ITEEEVARRTDLR--HLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
++ EE R DLR HL V S+DP GC D+DD L R L NG++E+
Sbjct: 426 VSPEEERERKDLRETHL-VFSIDPKGCEDVDDTLSVRTLANGSLEL 470
Score = 66 (28.3 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 526 TALCYNL-P-GCTDIDDALHCRPLPNGNIEV 554
T L +++ P GC D+DD L R L NG++E+
Sbjct: 440 THLVFSIDPKGCEDVDDTLSVRTLANGSLEL 470
Score = 62 (26.9 bits), Expect = 8.6e-18, Sum P(4) = 8.6e-18
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 572 LLELGYNLNYRNRQAQYAGRASVALHTHLFFRRKSITEEE 611
L EL ++N RNR AQ++ + S L ++F+ K EE
Sbjct: 803 LEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPENEE 842
Score = 39 (18.8 bits), Expect = 8.6e-18, Sum P(4) = 8.6e-18
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 315 NEVLLLEHDVPHSKF-SDL 332
++ LL +H PH +F S+L
Sbjct: 671 HQALLRQHPPPHQEFFSEL 689
>TAIR|locus:2203231 [details] [associations]
symbol:AT1G77680 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0004540
"ribonuclease activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003723 GO:GO:0004540
eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175 OMA:HIYEYRE
EMBL:AK229034 IPI:IPI00531584 RefSeq:NP_177891.1 UniGene:At.22476
ProteinModelPortal:Q0WPN0 STRING:Q0WPN0 PaxDb:Q0WPN0 PRIDE:Q0WPN0
EnsemblPlants:AT1G77680.1 GeneID:844104 KEGG:ath:AT1G77680
TAIR:At1g77680 HOGENOM:HOG000030596 InParanoid:Q0WPN0
PhylomeDB:Q0WPN0 ProtClustDB:CLSN2682125 Genevestigator:Q0WPN0
Uniprot:Q0WPN0
Length = 1055
Score = 173 (66.0 bits), Expect = 4.4e-17, Sum P(4) = 4.4e-17
Identities = 47/122 (38%), Positives = 67/122 (54%)
Query: 350 WCSGTSIGLSQISTGVISVGLEQGFPSLLKPRTTFVFYDFPRTTRTNFILLFLFQAVYFS 409
+CS + L S+G + LE+ LK + FV D N+ + + A YF
Sbjct: 727 FCSKHGMDLDISSSGQLQDSLEK-ITGNLKDDSVFV--DI----LNNYAIKPMQLASYFC 779
Query: 410 SGMLQQS--DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKAST 467
+G L+ S ++ HY LA P+YTHFTSP+RRY DI+VHR LAA + A+ Y K+ T
Sbjct: 780 TGNLKDSVAEWGHYALAVPLYTHFTSPLRRYPDIVVHRALAAALEAEELY----SKQKQT 835
Query: 468 AL 469
A+
Sbjct: 836 AI 837
Score = 153 (58.9 bits), Expect = 6.6e-15, Sum P(4) = 6.6e-15
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 474 VSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYP----SLLDKKAS--TA 527
V+++ HY LA P+YTHFTSP+RRY DI+VHR LAA + A+ Y + +D+ S T
Sbjct: 787 VAEWGHYALAVPLYTHFTSPLRRYPDIVVHRALAAALEAEELYSKQKQTAIDEGRSCFTG 846
Query: 528 LCYNLPGCTDID--DALHCRPLPNG 550
+ +N I+ +AL L +G
Sbjct: 847 IHFNKDAAESIEGKEALSVAALKHG 871
Score = 110 (43.8 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 607 ITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+ EEEV RR DLR L V ++DP TD+DDAL + LP G V
Sbjct: 468 VPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGFFRV 511
Score = 91 (37.1 bits), Expect = 4.4e-17, Sum P(4) = 4.4e-17
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 108 VETSVKDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGRE 167
+E S + ++ H + + ++ + F+ + N E +G IL+ G
Sbjct: 139 IEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYCKIDGVPTDILINGNV 198
Query: 168 GLNRAIDGDTVAVRLLPESQW 188
+RA++GDTV ++L P S W
Sbjct: 199 CQSRAVEGDTVVIKLDPLSLW 219
Score = 76 (31.8 bits), Expect = 4.4e-17, Sum P(4) = 4.4e-17
Identities = 22/88 (25%), Positives = 34/88 (38%)
Query: 257 LFVPAERKIPKIRVETRQI-ATLSGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTEN 315
L VP IR + L + + I W S +P G + + +
Sbjct: 380 LIVPFHVLPGSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQI 439
Query: 316 EVLLLEHDVPHSKFSDLVLSYLPPMPWE 343
+L ++ V S FS L+ LP +PWE
Sbjct: 440 NAILYQNSVCDSDFSPGSLTSLPRVPWE 467
Score = 49 (22.3 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 536 TDIDDALHCRPLPNGNIEV 554
TD+DDAL + LP G V
Sbjct: 493 TDLDDALSVQSLPGGFFRV 511
Score = 46 (21.3 bits), Expect = 4.4e-17, Sum P(4) = 4.4e-17
Identities = 6/13 (46%), Positives = 12/13 (92%)
Query: 224 RRPTGQIVGIIKR 236
+RPTGQ+V ++++
Sbjct: 317 KRPTGQVVAVVEK 329
Score = 37 (18.1 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 116 LYPLHATPSEIHAGIKN 132
+ P H P I A ++N
Sbjct: 381 IVPFHVLPGSIRARLEN 397
>ASPGD|ASPL0000054659 [details] [associations]
symbol:AN1158 species:162425 "Emericella nidulans"
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005935
"cellular bud neck" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0000900 "translation repressor activity, nucleic
acid binding" evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IEA] [GO:0060237 "regulation of fungal-type cell wall
organization" evidence=IEA] [GO:0008298 "intracellular mRNA
localization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:2000115 "regulation of maintenance
of bipolar cell polarity regulating cell shape" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 EMBL:AACD01000016
EMBL:BN001308 GO:GO:0003723 GO:GO:0004540 eggNOG:COG0557
OrthoDB:EOG4MGWGN HOGENOM:HOG000207194 OMA:DIFICGS
RefSeq:XP_658762.1 ProteinModelPortal:Q5BE72 STRING:Q5BE72
EnsemblFungi:CADANIAT00001468 GeneID:2876936 KEGG:ani:AN1158.2
Uniprot:Q5BE72
Length = 1374
Score = 146 (56.5 bits), Expect = 6.7e-17, Sum P(3) = 6.7e-17
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 404 QAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT-YPSLLD 462
+A Y+ +G +Q HY L P+YTHFT+P+RRYAD+IVHR L A + A + ++
Sbjct: 1040 RAKYYVAGTVQDEMRPHYTLNLPVYTHFTNPLRRYADVIVHRQLEAVLSDGAIEFSDDVE 1099
Query: 463 KKASTA-LCYNLVSDFHH 479
+ TA +C N H+
Sbjct: 1100 SLSKTADICNNKKDSAHN 1117
Score = 128 (50.1 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 479 HYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADAT-YPSLLDKKASTA-LCYN 531
HY L P+YTHFT+P+RRYAD+IVHR L A + A + ++ + TA +C N
Sbjct: 1056 HYTLNLPVYTHFTNPLRRYADVIVHRQLEAVLSDGAIEFSDDVESLSKTADICNN 1110
Score = 106 (42.4 bits), Expect = 6.7e-17, Sum P(3) = 6.7e-17
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 258 FVPAERKIPKIRVETRQIATLS-------GQRIVVA-IDSWPRHSRYPQGHFVRALGPIG 309
F P ++++P I + T Q RI VA I WP S +P G V LG +G
Sbjct: 653 FKPTDKRVPLIAIPTEQAPRDFVEKHQDYANRIFVACIKRWPITSLHPFGTLVEQLGEMG 712
Query: 310 DKDTENEVLLLEHDVPHSKFSDLVLSYLPPMPWEKST 346
D E E LL +++ +F+D VL + W S+
Sbjct: 713 DLKVETEALLRDNNFGSDEFTDAVLKSIGWENWSISS 749
Score = 96 (38.9 bits), Expect = 6.7e-17, Sum P(3) = 6.7e-17
Identities = 29/116 (25%), Positives = 56/116 (48%)
Query: 76 QSGLLTSSIEGYISTLSNG-EPLLDKLSKKEAVVETSVKDSLYPLHATPSEIHAGIKNQS 134
QSG L G + + +PL + ++++ + + +L+ + + + A + N
Sbjct: 393 QSGQLNGQGLGGLQASQHAPQPLSAQQTQQQ---QQQQRKTLFTPYLPQANLPALLSNGQ 449
Query: 135 LLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDGDTVAVRLLPESQ-WS 189
L+ G + +++N + V D I + G + NRA++GD VAV LL + WS
Sbjct: 450 LVSGVLRVNKKNRSDAYVTTPDLDADIFICGSKDRNRALEGDFVAVELLDVDEVWS 505
Score = 81 (33.6 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 606 SITEE-EVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
SI+ E +++ R D R +++P G +++D+A H + LP+G E+
Sbjct: 746 SISSEGDLSSRRDFRQETTFTIEPTGTSELDNAYHFKALPDGKAEI 791
Score = 59 (25.8 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 510 IGADATYPSLLDKKASTALCYNLPGCTDIDDALHCRPLPNGNIEV 554
I ++ S D + T G +++D+A H + LP+G E+
Sbjct: 747 ISSEGDLSSRRDFRQETTFTIEPTGTSELDNAYHFKALPDGKAEI 791
>SGD|S000002701 [details] [associations]
symbol:SSD1 "Translational repressor with a role in polar
growth and wall integrity" species:4932 "Saccharomyces cerevisiae"
[GO:0005933 "cellular bud" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0000900 "translation
repressor activity, nucleic acid binding" evidence=IGI] [GO:0060237
"regulation of fungal-type cell wall organization" evidence=IGI]
[GO:0017148 "negative regulation of translation" evidence=IGI]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005935
"cellular bud neck" evidence=IDA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 SGD:S000002701 GO:GO:0005634 GO:GO:0005935
GO:GO:0051301 GO:GO:0007067 EMBL:BK006938 GO:GO:0048027
GO:GO:0000932 GO:GO:0004540 GO:GO:0008298 GO:GO:0060237
GO:GO:0010494 GO:GO:0000900 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 OrthoDB:EOG4MGWGN EMBL:U51031 EMBL:M60318
EMBL:M63004 PIR:A39578 RefSeq:NP_010579.1 ProteinModelPortal:P24276
DIP:DIP-6449N IntAct:P24276 MINT:MINT-605909 STRING:P24276
PaxDb:P24276 PeptideAtlas:P24276 PRIDE:P24276 EnsemblFungi:YDR293C
GeneID:851887 KEGG:sce:YDR293C CYGD:YDR293c
GeneTree:ENSGT00530000069300 HOGENOM:HOG000207194 OMA:DIFICGS
NextBio:969865 Genevestigator:P24276 GermOnline:YDR293C
Uniprot:P24276
Length = 1250
Score = 148 (57.2 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 36/82 (43%), Positives = 48/82 (58%)
Query: 398 ILLF--LFQAVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADA 455
ILLF + +A YF +G + + HY L PIYTHFT+P+RRYAD +VHR L A I D
Sbjct: 959 ILLFKTMPRARYFIAGKVDPDQYGHYALNLPIYTHFTAPMRRYADHVVHRQLKAVIH-DT 1017
Query: 456 TYPSLLDK-KASTALCYNLVSD 476
Y ++ K ++ C N D
Sbjct: 1018 PYTEDMEALKITSEYC-NFKKD 1038
Score = 124 (48.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 477 FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDK-KASTALCYNLPGC 535
+ HY L PIYTHFT+P+RRYAD +VHR L A I D Y ++ K ++ C C
Sbjct: 981 YGHYALNLPIYTHFTAPMRRYADHVVHRQLKAVIH-DTPYTEDMEALKITSEYCNFKKDC 1039
Query: 536 T--DIDDALH---CRPLPN-GN 551
+ A+H C+ + + GN
Sbjct: 1040 AYQAQEQAIHLLLCKTINDMGN 1061
Score = 88 (36.0 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 258 FVPAERKIPKIRVETR-------QIATLSGQRIVVA-IDSWPRHSRYPQGHFVRALGPIG 309
F P ++K+P I + T + A +++ VA I WP S +P G V LG I
Sbjct: 584 FKPTDKKVPLIAIPTELAPKDFVENADKYSEKLFVASIKRWPITSLHPFGILVSELGDIH 643
Query: 310 DKDTENEVLLLEHDVPHSKFSD 331
D DTE + +L +++ +++ D
Sbjct: 644 DPDTEIDSILRDNNFLSNEYLD 665
Score = 84 (34.6 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 113 KDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEG-YDKPILVQGREGLNR 171
+ SL+ + + I I+ L+ G + +++N + V+ +G D I + G + NR
Sbjct: 337 RKSLFAPYLPQANIPELIQEGRLVAGILRVNKKNRSDAWVSTDGALDADIYICGSKDRNR 396
Query: 172 AIDGDTVAVRLLP-ESQWSA 190
A++GD VAV LL + W +
Sbjct: 397 ALEGDLVAVELLVVDDVWES 416
>CGD|CAL0003016 [details] [associations]
symbol:SSD1 species:5476 "Candida albicans" [GO:0020012
"evasion or tolerance of host immune response" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0010494 "cytoplasmic
stress granule" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005935 "cellular bud neck"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0060237 "regulation of fungal-type cell wall organization"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:2000115 "regulation of maintenance of bipolar
cell polarity regulating cell shape" evidence=IEA] [GO:0000900
"translation repressor activity, nucleic acid binding"
evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 CGD:CAL0003016
GO:GO:0009405 GO:GO:0003723 GO:GO:0004540 EMBL:AACQ01000012
GO:GO:0020012 RefSeq:XP_721868.1 ProteinModelPortal:Q5AK62
STRING:Q5AK62 GeneID:3636520 KEGG:cal:CaO19.3959 Uniprot:Q5AK62
Length = 1274
Score = 138 (53.6 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 407 YFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKAS 466
Y+ +G + HY P+YTHFT+P+RRYAD+IVHR L A + L KA
Sbjct: 956 YYVAGKQDTDSYAHYYFNLPLYTHFTAPLRRYADLIVHRQLKAVLNKQVEDKDLDSLKAI 1015
Query: 467 TALCYNLVSD 476
T C N D
Sbjct: 1016 TDYC-NFKKD 1024
Score = 126 (49.4 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 477 FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
+ HY P+YTHFT+P+RRYAD+IVHR L A + L KA T C
Sbjct: 967 YAHYYFNLPLYTHFTAPLRRYADLIVHRQLKAVLNKQVEDKDLDSLKAITDYC 1019
Score = 86 (35.3 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 113 KDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGY-DKPILVQGREGLNR 171
+ +L+ + S + I L+ G+ + +++N + V+ +G D I + G + NR
Sbjct: 332 RKTLFAPYLPQSSLPELINEGRLVTGTLRVNKKNRSDAYVSTDGLLDADIFICGSKDRNR 391
Query: 172 AIDGDTVAVRLL-PESQWSA 190
A++GD VAV LL + W +
Sbjct: 392 ALEGDLVAVELLIVDEVWES 411
Score = 86 (35.3 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 258 FVPAERKIPKIRVETRQIAT-------LSGQRIVVA-IDSWPRHSRYPQGHFVRALGPIG 309
F P ++K+P I + T Q R+ VA I WP S +P G V LGPI
Sbjct: 564 FKPTDKKVPLIAIPTEQAPKDFVENHEKYADRLFVASIKRWPITSLHPFGTLVSNLGPID 623
Query: 310 DKDTENEVLLLEHDVPHSKFSD 331
+TE + +L +++ ++ D
Sbjct: 624 SPETEIDSILRDNNFLCDEYPD 645
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/76 (19%), Positives = 43/76 (56%)
Query: 63 LLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDSLYPLH-A 121
L++++ R L+ +S +T ++ + L + + LD K+++ + + + ++ A
Sbjct: 821 LIAKEFRRHRLSNRSLGITPNLT-LLDQLDDEKVRLDLNIFKDSLAFDVISEISHKVNSA 879
Query: 122 TPSEIHAGIKNQSLLQ 137
+++HAG+ +Q++L+
Sbjct: 880 IAAKVHAGLGDQAILR 895
>UNIPROTKB|Q5AK62 [details] [associations]
symbol:SSD1 "Putative uncharacterized protein SSD1"
species:237561 "Candida albicans SC5314" [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0020012 "evasion or tolerance of host immune
response" evidence=IMP] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 CGD:CAL0003016 GO:GO:0009405 GO:GO:0003723
GO:GO:0004540 EMBL:AACQ01000012 GO:GO:0020012 RefSeq:XP_721868.1
ProteinModelPortal:Q5AK62 STRING:Q5AK62 GeneID:3636520
KEGG:cal:CaO19.3959 Uniprot:Q5AK62
Length = 1274
Score = 138 (53.6 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 407 YFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKAS 466
Y+ +G + HY P+YTHFT+P+RRYAD+IVHR L A + L KA
Sbjct: 956 YYVAGKQDTDSYAHYYFNLPLYTHFTAPLRRYADLIVHRQLKAVLNKQVEDKDLDSLKAI 1015
Query: 467 TALCYNLVSD 476
T C N D
Sbjct: 1016 TDYC-NFKKD 1024
Score = 126 (49.4 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 477 FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKASTALC 529
+ HY P+YTHFT+P+RRYAD+IVHR L A + L KA T C
Sbjct: 967 YAHYYFNLPLYTHFTAPLRRYADLIVHRQLKAVLNKQVEDKDLDSLKAITDYC 1019
Score = 86 (35.3 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 113 KDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGY-DKPILVQGREGLNR 171
+ +L+ + S + I L+ G+ + +++N + V+ +G D I + G + NR
Sbjct: 332 RKTLFAPYLPQSSLPELINEGRLVTGTLRVNKKNRSDAYVSTDGLLDADIFICGSKDRNR 391
Query: 172 AIDGDTVAVRLL-PESQWSA 190
A++GD VAV LL + W +
Sbjct: 392 ALEGDLVAVELLIVDEVWES 411
Score = 86 (35.3 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 258 FVPAERKIPKIRVETRQIAT-------LSGQRIVVA-IDSWPRHSRYPQGHFVRALGPIG 309
F P ++K+P I + T Q R+ VA I WP S +P G V LGPI
Sbjct: 564 FKPTDKKVPLIAIPTEQAPKDFVENHEKYADRLFVASIKRWPITSLHPFGTLVSNLGPID 623
Query: 310 DKDTENEVLLLEHDVPHSKFSD 331
+TE + +L +++ ++ D
Sbjct: 624 SPETEIDSILRDNNFLCDEYPD 645
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/76 (19%), Positives = 43/76 (56%)
Query: 63 LLSEDVRNRDLATQSGLLTSSIEGYISTLSNGEPLLDKLSKKEAVVETSVKDSLYPLH-A 121
L++++ R L+ +S +T ++ + L + + LD K+++ + + + ++ A
Sbjct: 821 LIAKEFRRHRLSNRSLGITPNLT-LLDQLDDEKVRLDLNIFKDSLAFDVISEISHKVNSA 879
Query: 122 TPSEIHAGIKNQSLLQ 137
+++HAG+ +Q++L+
Sbjct: 880 IAAKVHAGLGDQAILR 895
>DICTYBASE|DDB_G0278757 [details] [associations]
symbol:DDB_G0278757 "DIS3-like exonuclease 2"
species:44689 "Dictyostelium discoideum" [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
dictyBase:DDB_G0278757 GO:GO:0003723 EMBL:AAFI02000024
GO:GO:0004540 eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
RefSeq:XP_641919.1 ProteinModelPortal:Q54XT5
EnsemblProtists:DDB0206173 GeneID:8621677 KEGG:ddi:DDB_G0278757
InParanoid:Q54XT5 OMA:EICTIDP ProtClustDB:CLSZ2447996
Uniprot:Q54XT5
Length = 1343
Score = 160 (61.4 bits), Expect = 4.5e-13, Sum P(4) = 4.5e-13
Identities = 35/72 (48%), Positives = 43/72 (59%)
Query: 405 AVYFSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPS----L 460
A YF S ++ D+ HY L P YTHFTSPIRRYADIIVHRLL I + + L
Sbjct: 1137 AEYFCSNNEEEEDWRHYALNAPFYTHFTSPIRRYADIIVHRLLDLSIQVEKNNRNHTEQL 1196
Query: 461 LDKKASTALCYN 472
++ TA+C N
Sbjct: 1197 PSSESITAICKN 1208
Score = 145 (56.1 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 35/79 (44%), Positives = 43/79 (54%)
Query: 459 SLLDKKASTALCYNLVS--DFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATY 516
S+ K + C N D+ HY L P YTHFTSPIRRYADIIVHRLL I +
Sbjct: 1130 SIRSMKLAEYFCSNNEEEEDWRHYALNAPFYTHFTSPIRRYADIIVHRLLDLSIQVEKNN 1189
Query: 517 PS----LLDKKASTALCYN 531
+ L ++ TA+C N
Sbjct: 1190 RNHTEQLPSSESITAICKN 1208
Score = 125 (49.1 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 608 TEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+E+++ R DLR+L++C++DP D+DDALHC L +GN EV
Sbjct: 823 SEQDLKGRRDLRNLEICTIDPDTAKDLDDALHCIELEDGNFEV 865
Score = 78 (32.5 bits), Expect = 4.5e-13, Sum P(4) = 4.5e-13
Identities = 29/124 (23%), Positives = 51/124 (41%)
Query: 229 QIVGIIKRKW-RQYCGILQPNPLAGSSRHLFVPAERKIPKIRVETRQIATLSG-----QR 282
++V I++ K + + GI+ + + F+P + +PK + I ++
Sbjct: 696 RVVYIVEEKHNKNHVGIMVDENVNSIFTN-FIPMDTTLPKCCIFKESIPQYKSNPEKYKK 754
Query: 283 IVVAI--DSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPM 340
+V++ W S P GH+ G G + E LL E V FS V+ LP +
Sbjct: 755 SLVSVGYSGWKETSLLPIGHYKSLFGECGKIEPETYALLSEFGVETDPFSKEVMECLPKI 814
Query: 341 PWEK 344
K
Sbjct: 815 DQSK 818
Score = 77 (32.2 bits), Expect = 4.5e-13, Sum P(4) = 4.5e-13
Identities = 14/72 (19%), Positives = 31/72 (43%)
Query: 117 YPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDGD 176
Y + ++ G+ G+ + + + + + + EG + G + NR+ + D
Sbjct: 438 YKQYVEKEDLEKGLAEGKYFFGTLRVNPKKYHDAYITVEGCSHDVFCDGLKYRNRSFNND 497
Query: 177 TVAVRLLPESQW 188
VA +L E +W
Sbjct: 498 VVAFEILDEKEW 509
Score = 37 (18.1 bits), Expect = 4.5e-13, Sum P(4) = 4.5e-13
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 29 PGESVNDRNDRALRRVAT 46
P ++VN ND + AT
Sbjct: 244 PTDNVNSTNDNSTTNTAT 261
>UNIPROTKB|H7C440 [details] [associations]
symbol:DIS3L2 "DIS3-like exonuclease 2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 SMART:SM00955 GO:GO:0003723 EMBL:AC013435
GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175 EMBL:AC019130
EMBL:AC068134 EMBL:AC093374 EMBL:AC138658 HGNC:HGNC:28648
ChiTaRS:DIS3L2 EMBL:AC105461 ProteinModelPortal:H7C440
Ensembl:ENST00000424049 Bgee:H7C440 Uniprot:H7C440
Length = 383
Score = 178 (67.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 395 TNFILLFLFQAVYFSSGMLQQ-SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG 452
TN + A+YF SG+LQ + F HY L P+YTHFTSPIRR+AD++VHRLLAA +G
Sbjct: 297 TNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG 355
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 35/71 (49%), Positives = 41/71 (57%)
Query: 470 CYNLVSD---FHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADATYPSLLDKKAST 526
C L+ D F HY L P+YTHFTSPIRR+AD++VHRLLAA +G Y LD T
Sbjct: 311 CSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG----YRERLDMAPDT 366
Query: 527 ALCYNLPGCTD 537
L C D
Sbjct: 367 -LQKQADHCND 376
>UNIPROTKB|I3LLL5 [details] [associations]
symbol:I3LLL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001900
Pfam:PF00773 GO:GO:0003723 GO:GO:0004540 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 EMBL:CU861482
Ensembl:ENSSSCT00000031517 Uniprot:I3LLL5
Length = 385
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 395 TNFILLFLFQAVYFSSGMLQQ-SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG- 452
TN + A+YF +G L+ + F HY L P+YTHFTSPIRR+AD++VHRLLAA +G
Sbjct: 164 TNMCSRPMQMALYFCAGTLRDPAQFRHYALNVPLYTHFTSPIRRFADVMVHRLLAAALGY 223
Query: 453 --ADATYPSLLDKKA 465
P++L K+A
Sbjct: 224 REPPDMEPNVLQKRA 238
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 475 SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIG---ADATYPSLLDKKA 524
+ F HY L P+YTHFTSPIRR+AD++VHRLLAA +G P++L K+A
Sbjct: 186 AQFRHYALNVPLYTHFTSPIRRFADVMVHRLLAAALGYREPPDMEPNVLQKRA 238
>POMBASE|SPBC609.01 [details] [associations]
symbol:SPBC609.01 "ribonuclease II (RNB) family"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=ISM] [GO:0004540 "ribonuclease activity" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 PomBase:SPBC609.01
GO:GO:0005829 EMBL:CU329671 GO:GO:0003723 GO:GO:0004540
eggNOG:COG0557 PROSITE:PS01175 OrthoDB:EOG4MGWGN PIR:T40572
RefSeq:NP_596311.1 ProteinModelPortal:O94525
EnsemblFungi:SPBC609.01.1 GeneID:2540838 KEGG:spo:SPBC609.01
OMA:LHEVATH NextBio:20801955 Uniprot:O94525
Length = 1157
Score = 93 (37.8 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 37/147 (25%), Positives = 60/147 (40%)
Query: 408 FSSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACIGA--DAT--YPSLLDK 463
++ G D H+ + P YTHF P RRY DI V R L D + Y SLL
Sbjct: 879 YTIGTSNAKDVSHFVFSCPYYTHFCHPTRRYIDICVQRQLREAFDGRPDFSKDYRSLL-- 936
Query: 464 KASTALCYNLVSDFHHYGLATPIYTHFTS---PIRRYADIIVHRLLAACIGAD----ATY 516
+ T C N +S+F+ ++ + I + ++ H+ + + Y
Sbjct: 937 -SITQSC-NTLSNFYRNAQEKSLHAYLCQLLHSINLRSGLVKHKAFVLAVDQEYIDIVIY 994
Query: 517 PSLLDKKASTALCYNLPGCTDIDDALH 543
L+++ S L L C D ++ H
Sbjct: 995 EFGLERRISLDLL-PLSNC-DFNEQKH 1019
Score = 92 (37.4 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 74 ATQSGLLTSSIEGYISTLSNGEPL-----LD-KLSKKEAVVETSVKD--SLYPLHATPSE 125
A Q L +S + YI+ S+G L L+ S K V + + +L+ + +
Sbjct: 241 APQIPLSNASQQSYINHSSDGASLPQSSFLNFNSSGKRVSVSAAAQQHKNLFLPYLPQAS 300
Query: 126 IHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRAIDGDTVAVRLL 183
+ I LL G+ +R+N + V + D+PI + G + NR ++GD VAV LL
Sbjct: 301 LPKFIGTGKLLVGTLHINRKNRSDAYVITDVLDEPIFICGSKDRNRTLEGDLVAVELL 358
Score = 80 (33.2 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 258 FVPAERKIPKIRVETRQIAT--------LSGQRIVVAIDSWPRHSRYPQGHFVRALGPIG 309
F P++++IP I + + Q+ + + I WP S +P G ++G IG
Sbjct: 503 FKPSDKRIPLIAISSDQVPPTFFTNNDDFKDKVFLAGIKRWPTTSLHPFGTLYESIGTIG 562
Query: 310 DKDTENEVLLLE-----HDVPHSKFSDLVLSYLPPMPWEK 344
D E + +L + +D P S S V P+P E+
Sbjct: 563 DPKVEYKAILHDFSCHTYDFPES-LSHCVKRLPTPIPAEE 601
>FB|FBgn0035111 [details] [associations]
symbol:CG16940 species:7227 "Drosophila melanogaster"
[GO:0000176 "nuclear exosome (RNase complex)" evidence=ISS]
[GO:0008859 "exoribonuclease II activity" evidence=ISS] [GO:0000177
"cytoplasmic exosome (RNase complex)" evidence=ISS] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR001900 Pfam:PF00773
SMART:SM00955 EMBL:AE014296 GO:GO:0003723 InterPro:IPR022966
PROSITE:PS01175 GeneTree:ENSGT00530000063106 GO:GO:0008859
EMBL:BT044564 RefSeq:NP_728490.1 UniGene:Dm.29548 SMR:Q8IRJ7
EnsemblMetazoa:FBtr0072486 GeneID:38034 KEGG:dme:Dmel_CG16940
UCSC:CG16940-RC FlyBase:FBgn0035111 InParanoid:Q8IRJ7 OMA:LESGHVI
OrthoDB:EOG46M912 GenomeRNAi:38034 NextBio:806667 Uniprot:Q8IRJ7
Length = 1044
Score = 161 (61.7 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 404 QAVYF-SSGMLQQSDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACI 451
+A YF S G + +D HY L+ PIYTHFTSPIRRY DI+VHRLLAA +
Sbjct: 861 RATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAAL 909
Score = 144 (55.7 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 26/36 (72%), Positives = 30/36 (83%)
Query: 475 SDFHHYGLATPIYTHFTSPIRRYADIIVHRLLAACI 510
+D HY L+ PIYTHFTSPIRRY DI+VHRLLAA +
Sbjct: 874 ADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAAL 909
>TIGR_CMR|GSU_1485 [details] [associations]
symbol:GSU_1485 "ribonuclease R, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008997 "ribonuclease R
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] HAMAP:MF_01895 InterPro:IPR001900 InterPro:IPR003029
InterPro:IPR004476 InterPro:IPR011129 InterPro:IPR011805
Pfam:PF00575 Pfam:PF00773 PROSITE:PS50126 SMART:SM00357
SMART:SM00955 GO:GO:0005737 GO:GO:0003723 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0090305 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016070 InterPro:IPR022967
SMART:SM00316 InterPro:IPR022966 PROSITE:PS01175 GO:GO:0008859
InterPro:IPR013223 Pfam:PF08206 TIGRFAMs:TIGR00358 KO:K12573
OMA:FGFLIPD TIGRFAMs:TIGR02063 HOGENOM:HOG000071119
RefSeq:NP_952536.1 ProteinModelPortal:Q74D34 GeneID:2686169
KEGG:gsu:GSU1485 PATRIC:22025817 ProtClustDB:CLSK828384
BioCyc:GSUL243231:GH27-1468-MONOMER Uniprot:Q74D34
Length = 763
Score = 118 (46.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 420 HYGLATPIYTHFTSPIRRYADIIVHRLL 447
H+GLA YTHFTSPIRRY D++VHR+L
Sbjct: 540 HFGLAARCYTHFTSPIRRYPDLVVHRIL 567
Score = 118 (46.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 479 HYGLATPIYTHFTSPIRRYADIIVHRLL 506
H+GLA YTHFTSPIRRY D++VHR+L
Sbjct: 540 HFGLAARCYTHFTSPIRRYPDLVVHRIL 567
Score = 89 (36.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 279 SGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP 338
SGQ +V + +WP + +G V LG D + E ++ +HD+P+ +F VL+
Sbjct: 171 SGQVVVAELTAWPTERKKAEGRIVEVLGSPDDPEVEVLTIIRKHDLPY-EFPVDVLTEAR 229
Query: 339 PMPWEKSTG 347
P E G
Sbjct: 230 STPQEVRRG 238
>TIGR_CMR|CHY_0289 [details] [associations]
symbol:CHY_0289 "ribonuclease R" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006401 "RNA
catabolic process" evidence=ISS] [GO:0008997 "ribonuclease R
activity" evidence=ISS] HAMAP:MF_01895 InterPro:IPR001900
InterPro:IPR003029 InterPro:IPR004476 InterPro:IPR011129
InterPro:IPR011805 Pfam:PF00575 Pfam:PF00773 PROSITE:PS50126
SMART:SM00357 SMART:SM00955 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0090305
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016070
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0557 InterPro:IPR022966
PROSITE:PS01175 GO:GO:0008859 InterPro:IPR013223 Pfam:PF08206
TIGRFAMs:TIGR00358 KO:K12573 OMA:FGFLIPD TIGRFAMs:TIGR02063
RefSeq:YP_359161.1 ProteinModelPortal:Q3AFC3 STRING:Q3AFC3
GeneID:3727430 KEGG:chy:CHY_0289 PATRIC:21273751
HOGENOM:HOG000071119 BioCyc:CHYD246194:GJCN-290-MONOMER
Uniprot:Q3AFC3
Length = 724
Score = 114 (45.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 18/28 (64%), Positives = 24/28 (85%)
Query: 420 HYGLATPIYTHFTSPIRRYADIIVHRLL 447
H+GLA YTHFTSPIRRY D+++HR++
Sbjct: 541 HFGLAAEYYTHFTSPIRRYPDLMIHRII 568
Score = 114 (45.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 18/28 (64%), Positives = 24/28 (85%)
Query: 479 HYGLATPIYTHFTSPIRRYADIIVHRLL 506
H+GLA YTHFTSPIRRY D+++HR++
Sbjct: 541 HFGLAAEYYTHFTSPIRRYPDLMIHRII 568
Score = 87 (35.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 225 RPTGQIVGIIKRKWRQYCGILQPNPLAGSSRHLFVPAERKIPK---IRVETRQIATLSGQ 281
RP G++V I++R + G G L P + +I I + + + +G+
Sbjct: 118 RPEGEVVKILERANKTVVGSFYRRRHYG----LVEPDDERITGAIIIPLGKKGVKAKNGE 173
Query: 282 RIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEH 322
++VV I ++PR P+G + LG D++T + ++ ++
Sbjct: 174 KVVVEITAYPRKGELPEGKIIEILGDPEDQETRLKAIIKKY 214
Score = 85 (35.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 605 KSITEEEVARRTDLRHLDVCSVDPPGCTDIDDALHCRPLPNGNIEV 650
+ I EE+ R DLR + ++D D+DDA+ + LPNGN ++
Sbjct: 233 QEIGPEELKSRRDLRGEMIVTIDDEDAKDLDDAVSLKKLPNGNYQL 278
>TIGR_CMR|BA_5334 [details] [associations]
symbol:BA_5334 "ribonuclease R" species:198094 "Bacillus
anthracis str. Ames" [GO:0006396 "RNA processing" evidence=ISS]
[GO:0008997 "ribonuclease R activity" evidence=ISS] HAMAP:MF_01895
InterPro:IPR001900 InterPro:IPR003029 InterPro:IPR004476
InterPro:IPR011129 InterPro:IPR011805 Pfam:PF00575 Pfam:PF00773
PROSITE:PS50126 SMART:SM00357 SMART:SM00955 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
GO:GO:0090305 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0016070 InterPro:IPR022967 SMART:SM00316 InterPro:IPR022966
PROSITE:PS01175 GO:GO:0008859 InterPro:IPR013223 Pfam:PF08206
TIGRFAMs:TIGR00358 KO:K12573 OMA:FGFLIPD TIGRFAMs:TIGR02063
HOGENOM:HOG000071119 RefSeq:NP_847510.1 RefSeq:YP_021992.2
RefSeq:YP_031196.1 ProteinModelPortal:Q81XA6 IntAct:Q81XA6
DNASU:1084838 EnsemblBacteria:EBBACT00000009754
EnsemblBacteria:EBBACT00000016672 EnsemblBacteria:EBBACT00000021451
GeneID:1084838 GeneID:2818515 GeneID:2848989 KEGG:ban:BA_5334
KEGG:bar:GBAA_5334 KEGG:bat:BAS4956 ProtClustDB:CLSK873641
BioCyc:BANT260799:GJAJ-5031-MONOMER
BioCyc:BANT261594:GJ7F-5204-MONOMER Uniprot:Q81XA6
Length = 808
Score = 120 (47.3 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 420 HYGLATPIYTHFTSPIRRYADIIVHRLL 447
H+GL+T YTHFTSPIRRY D IVHRL+
Sbjct: 549 HFGLSTEFYTHFTSPIRRYPDTIVHRLI 576
Score = 120 (47.3 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 479 HYGLATPIYTHFTSPIRRYADIIVHRLL 506
H+GL+T YTHFTSPIRRY D IVHRL+
Sbjct: 549 HFGLSTEFYTHFTSPIRRYPDTIVHRLI 576
Score = 74 (31.1 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 26/119 (21%), Positives = 55/119 (46%)
Query: 225 RPTGQIVGIIKRKWRQYCGILQPNPLAGSSRHLFVPAERK-IPKIRV-ETRQIATLSGQR 282
R G IV I++R ++ G + G +P ++ I V ++ + + G +
Sbjct: 128 RQEGSIVRILERGTKELVGTYTESKNFG----FVIPDNKRWTSDIFVLKSASMGAVEGHK 183
Query: 283 IVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLPPMP 341
+VV I S+P + +G ++ LG D + ++ +H +P + F + V+ + +P
Sbjct: 184 VVVKITSYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLA-FPEEVMEHANSVP 241
Score = 48 (22.0 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 158 DKPILVQGREGLNRAIDGDTVAVRLLPESQWS 189
D + + E LN A+ GDTV RL +S S
Sbjct: 97 DDDLFIPPTE-LNGALHGDTVLARLSSQSSGS 127
>POMBASE|SPCC16C4.09 [details] [associations]
symbol:sts5 "RNB-like protein" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=ISM]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006401 "RNA
catabolic process" evidence=ISM] [GO:0032153 "cell division site"
evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:2000115 "regulation of maintenance of bipolar
cell polarity regulating cell shape" evidence=IMP]
InterPro:IPR001900 Pfam:PF00773 SMART:SM00955 PomBase:SPCC16C4.09
GO:GO:0005829 GO:GO:0034613 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0032153 GO:GO:0003723 GO:GO:0006401 GO:GO:0007049
GO:GO:0004527 GO:GO:0004540 eggNOG:COG0557 PROSITE:PS01175
OrthoDB:EOG4MGWGN EMBL:D58421 PIR:T41099 PIR:T45283
RefSeq:NP_587919.1 ProteinModelPortal:O74454 STRING:O74454
EnsemblFungi:SPCC16C4.09.1 GeneID:2539180 KEGG:spo:SPCC16C4.09
OMA:HESNINS NextBio:20800351 GO:GO:2000115 Uniprot:O74454
Length = 1066
Score = 96 (38.9 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 113 KDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPILVQGREGLNRA 172
+ +L+ + S I A + + L+ G S++N + V+ +G D + + G + NRA
Sbjct: 283 RKNLFSPYLPQSSIPALLAERRLVTGILIVSKKNRSDAFVSVDGLDAEVFICGSKDRNRA 342
Query: 173 IDGDTVAVRLLPESQ-WS 189
++GD VA+ LL + W+
Sbjct: 343 LEGDVVAIELLDVDEVWA 360
Score = 75 (31.5 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 258 FVPAERKIPKIRVETRQIAT--LSG-----QRIVVA-IDSWPRHSRYPQGHFVRALGPIG 309
F P+++++P I + T Q T L QR+ +A I WP S +P G V LG +
Sbjct: 484 FKPSDKRVPLIAIPTEQAPTDFLGNDQAYAQRLFLASIKRWPVTSLHPFGMLVGELGSMD 543
Query: 310 DKDTENEVLLLEHDVP-HSK 328
+ LL HD HS+
Sbjct: 544 SMSAQVSALL--HDTGVHSE 561
Score = 73 (30.8 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 472 NLVSDFHHYGLA--TPIYTHFTSPIRRYADIIVH 503
NL S G+ + THFT+P+ RY DI+VH
Sbjct: 893 NLASQMMSLGIEDESDDLTHFTAPLERYGDIVVH 926
Score = 71 (30.1 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 429 THFTSPIRRYADIIVH 444
THFT+P+ RY DI+VH
Sbjct: 911 THFTAPLERYGDIVVH 926
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 540 DALHCRPLPNGNIEVTYPSLGMSQ 563
D L C P+ +V +PSLGM +
Sbjct: 984 DGLVCFVAPS-YFDVFFPSLGMEK 1006
>TIGR_CMR|CBU_1091 [details] [associations]
symbol:CBU_1091 "ribonuclease R" species:227377 "Coxiella
burnetii RSA 493" [GO:0008997 "ribonuclease R activity"
evidence=ISS] HAMAP:MF_01895 InterPro:IPR001900 InterPro:IPR003029
InterPro:IPR004476 InterPro:IPR011129 InterPro:IPR011805
Pfam:PF00575 Pfam:PF00773 PROSITE:PS50126 SMART:SM00357
SMART:SM00955 GO:GO:0005737 GO:GO:0003723 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0090305 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016070 InterPro:IPR022967
SMART:SM00316 GO:GO:0008859 InterPro:IPR013223 Pfam:PF08206
TIGRFAMs:TIGR00358 HOGENOM:HOG000071120 KO:K12573 OMA:FGFLIPD
TIGRFAMs:TIGR02063 RefSeq:NP_820090.2 ProteinModelPortal:Q83CM3
PRIDE:Q83CM3 GeneID:1208992 KEGG:cbu:CBU_1091 PATRIC:17930913
ProtClustDB:CLSK914532 BioCyc:CBUR227377:GJ7S-1084-MONOMER
Uniprot:Q83CM3
Length = 749
Score = 100 (40.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 417 DFHHYGLATPIYTHFTSPIRRYADIIVHR 445
D H+GL+ Y HFTSPIRRY D++VHR
Sbjct: 565 DGGHFGLSYERYCHFTSPIRRYPDLLVHR 593
Score = 100 (40.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 476 DFHHYGLATPIYTHFTSPIRRYADIIVHR 504
D H+GL+ Y HFTSPIRRY D++VHR
Sbjct: 565 DGGHFGLSYERYCHFTSPIRRYPDLLVHR 593
Score = 92 (37.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 34/125 (27%), Positives = 53/125 (42%)
Query: 221 PAERRPTGQIVGIIKRKWRQYCG-ILQPNPLAG-SSRHLFVPAERKIPKIRVETRQIATL 278
P ERRP G IV I++R Q G + +A H + + IP +Q
Sbjct: 149 PKERRPEGAIVEILERNTHQVVGRYFEEGGIAFVDPNHKLITQDILIPP----GQQGEAK 204
Query: 279 SGQRIVVAIDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPHSKFSDLVLSYLP 338
+GQ +V I P R G + LG E E+ + H++P+ ++ + VL
Sbjct: 205 TGQFVVAEITVQPTKRRQAMGRIIEILGDQLTPGMEVELAIRTHELPY-RWPNEVLREAK 263
Query: 339 PMPWE 343
+P E
Sbjct: 264 KLPVE 268
>TIGR_CMR|CPS_4617 [details] [associations]
symbol:CPS_4617 "ribonuclease R" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008997 "ribonuclease R activity"
evidence=ISS] [GO:0016075 "rRNA catabolic process" evidence=ISS]
HAMAP:MF_01895 InterPro:IPR001900 InterPro:IPR003029
InterPro:IPR004476 InterPro:IPR011129 InterPro:IPR011805
Pfam:PF00575 Pfam:PF00773 PROSITE:PS50126 SMART:SM00357
SMART:SM00955 GO:GO:0005737 GO:GO:0003723 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0090305 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016070 InterPro:IPR022967
SMART:SM00316 eggNOG:COG0557 InterPro:IPR022966 PROSITE:PS01175
GO:GO:0008859 InterPro:IPR013223 Pfam:PF08206 TIGRFAMs:TIGR00358
HOGENOM:HOG000071120 KO:K12573 OMA:FGFLIPD TIGRFAMs:TIGR02063
RefSeq:YP_271264.1 ProteinModelPortal:Q47VA8 STRING:Q47VA8
GeneID:3520956 KEGG:cps:CPS_4617 PATRIC:21472057
BioCyc:CPSY167879:GI48-4626-MONOMER Uniprot:Q47VA8
Length = 826
Score = 128 (50.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 415 QSDFH-HYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADA 455
QSD H+GLA P Y+HFTSPIRRY D++VHR++ A + +A
Sbjct: 557 QSDNEGHFGLALPSYSHFTSPIRRYPDLVVHRVIKAILEKEA 598
Score = 125 (49.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 479 HYGLATPIYTHFTSPIRRYADIIVHRLLAACIGADA 514
H+GLA P Y+HFTSPIRRY D++VHR++ A + +A
Sbjct: 563 HFGLALPSYSHFTSPIRRYPDLVVHRVIKAILEKEA 598
Score = 62 (26.9 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 24/100 (24%), Positives = 44/100 (44%)
Query: 236 RKWRQYCGILQPN--PLAGS---SRHL--FVPAERKIPK-IRVETR-QIATLSGQRIVVA 286
RK + +++P P+ G H+ V + KI + + ++ + ++ GQ +VV
Sbjct: 144 RKEVKILEVIEPRKAPIVGRLYIDHHVCSVVSEDSKIKQEVLIDPQTKMGARHGQMVVVE 203
Query: 287 IDSWPRHSRYPQGHFVRALGPIGDKDTENEVLLLEHDVPH 326
+ P + G + LG E E+ L HD+PH
Sbjct: 204 LVQRPTKRSHAIGKVIEVLGDHLAPGMEIEIALRAHDLPH 243
>GENEDB_PFALCIPARUM|PFF0745c [details] [associations]
symbol:PFF0745c "ribonuclease, putative"
species:5833 "Plasmodium falciparum" [GO:0006396 "RNA processing"
evidence=ISS] InterPro:IPR001900 Pfam:PF00773 SMART:SM00955
GO:GO:0003723 GO:GO:0004540 EMBL:AL844505 InterPro:IPR022966
PROSITE:PS01175 InterPro:IPR013223 Pfam:PF08206 RefSeq:XP_966140.2
EnsemblProtists:PFF0745c:mRNA GeneID:3885866 KEGG:pfa:PFF0745c
EuPathDB:PlasmoDB:PF3D7_0615400 Uniprot:C6KSZ5
Length = 2733
Score = 115 (45.5 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 402 LFQAVYFSSGMLQQSDF--HHYGLATPIYTHFTSPIRRYADIIVHRLLAACI 451
+ +A Y + ++ ++ +HY L+ +YTHFTSPIRRY DI+VHR++ I
Sbjct: 2507 MIRAEYHTYKYIKDNNMSTYHYALSFLLYTHFTSPIRRYPDILVHRVIKKII 2558
Score = 114 (45.2 bits), Expect = 8.0e-06, Sum P(4) = 8.0e-06
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 478 HHYGLATPIYTHFTSPIRRYADIIVHRLLAACI 510
+HY L+ +YTHFTSPIRRY DI+VHR++ I
Sbjct: 2526 YHYALSFLLYTHFTSPIRRYPDILVHRVIKKII 2558
Score = 79 (32.9 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 103 KKEAVVETSVKDSLYPLHATPSEIHAGIKNQSLLQGSFQASRENFLEGQVNCEGYDKPIL 162
+K+A + + SLY + T + GI N+ ++G R ++ G + + ++ +
Sbjct: 1176 EKKAKKKQKNEFSLYDEYITQEKAIEGIINKKYIRGILNVRRSDY--GFILFD--NQKVH 1231
Query: 163 VQGREGLNRAIDGDTVAVRL 182
++ + +NRA+DGD+V V++
Sbjct: 1232 IKSKRDMNRALDGDSVVVKI 1251
Score = 64 (27.6 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 259 VPAERKIPKIRVETRQI---------ATLSGQRIVVAIDSWPRHSRYPQGHFVRALGPIG 309
+P ++ IP I+V I +S Q + + I W + YP+G V LG
Sbjct: 1293 IPFKKNIPLIKVLNEDIIKFMNKYNICDISNQLVYIKIFVWDINDTYPEGKIVEILGQND 1352
Query: 310 DKDTENEVLLLEHDV 324
+LL H++
Sbjct: 1353 IFHNMQNAILLNHNL 1367
Score = 37 (18.1 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 1 LKDLISNPSRKFY-VFVNEHHYETYVEQEPGESVNDRN 37
L + I+N +++F V N H +T V+++ E + D N
Sbjct: 984 LFNAINNLNKQFSNVVKNIHMDQTIVDKQK-EQILDEN 1020
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 654 635 0.00092 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 624 (66 KB)
Total size of DFA: 353 KB (2175 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 50.88u 0.09s 50.97t Elapsed: 00:00:17
Total cpu time: 50.91u 0.09s 51.00t Elapsed: 00:00:21
Start: Thu Aug 15 14:11:36 2013 End: Thu Aug 15 14:11:57 2013