BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4858
(979 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TAC|B Chain B, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 334
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 504 QQVPLWSTEDVREWVRQIGFAEYANNFVESRVDGDLL-LQLNEEH----LRDDIGIHNGI 558
+ V +WS + V W++ IG EYANN +ES V G L+ L N ++ L I N
Sbjct: 244 KDVLVWSNDRVIRWIQAIGLREYANNILESGVHGSLIALDENFDYSSLALLLQIPTQNTQ 303
Query: 559 QRRRFERELQNLKKMADYSSKDVTNLNNF 587
R+ ERE NL + D ++ NF
Sbjct: 304 ARQILEREYNNLLALGTERRLDESDDKNF 332
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 516 EWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNGIQRRRFERELQNLKKMAD 575
EW+ +G +Y + F+E VD +L L ++ LR + + + R + + LK++ +
Sbjct: 168 EWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRL-N 226
Query: 576 YSSKDV 581
Y K++
Sbjct: 227 YDRKEL 232
>pdb|3TAD|A Chain A, Crystal Structure Of The Liprin-AlphaLIPRIN-Beta Complex
pdb|3TAD|B Chain B, Crystal Structure Of The Liprin-AlphaLIPRIN-Beta Complex
Length = 297
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 504 QQVPLWSTEDVREWVRQIGFAEYANNFVESRVDGDLL-LQLNEEH----LRDDIGIHNGI 558
+ V +WS + V W++ IG EYANN +ES V G L+ L N ++ L I N
Sbjct: 207 KDVLVWSNDRVIRWIQAIGLREYANNILESGVHGSLIALDENFDYSSLALLLQIPTQNTQ 266
Query: 559 QRRRFERELQNLKKMADYSSKDVTNLNNF 587
R+ ERE NL + D ++ NF
Sbjct: 267 ARQILEREYNNLLALGTERRLDESDDKNF 295
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 516 EWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNGIQRRRFERELQNLKKMAD 575
EW+ +G +Y + F+E VD +L L ++ LR + + + R + + LK++ +
Sbjct: 131 EWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRL-N 189
Query: 576 YSSKDV 581
Y K++
Sbjct: 190 YDRKEL 195
>pdb|1V85|A Chain A, Sterile Alpha Motif (Sam) Domain Of Mouse Bifunctional
Apoptosis Regulator
Length = 91
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 504 QQVPLWSTEDVREWVRQIG--FAEYANNFVESRVDGDLLLQLNEEHL-RDDIGIHNGIQR 560
+ V W+TE+V W+ Q+G + Y + F+ RV+G LLL L EE R I N R
Sbjct: 15 KAVDKWTTEEVVLWLEQLGPWASLYRDRFLSERVNGRLLLTLTEEEFSRAPYTIENSSHR 74
Query: 561 RRFERELQNLK 571
R EL+ ++
Sbjct: 75 RVILTELERVR 85
>pdb|2KIV|A Chain A, Aida-1 Sam Domain Tandem
Length = 148
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 506 VPLWSTEDVREWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRD--DIGIHNGIQRRRF 563
VP S + V +W+ IG +Y N+ + + D + N +D +IGI N R+R
Sbjct: 9 VPRGSVQTVGQWLESIGLPQYENHLMANGFDNVQAMGSNVMEDQDLLEIGILNSGHRQRI 68
Query: 564 ERELQNLKKM--ADYSSKDVTNLNNFLLNLGQEFSIYTYSML-NAGVDKDSIKALSEEQL 620
+ +Q L KM + T++ +L ++ E YT + L N D +K ++E +L
Sbjct: 69 LQAIQLLPKMRPIGHDGAHPTSVAEWLDSI--ELGDYTKAFLINGYTSMDLLKKIAEVEL 126
Query: 621 ICECGIHNSIHRLRIMEAI 639
I I+ HR RI+ ++
Sbjct: 127 INVLKINLIGHRKRILASL 145
>pdb|1PK1|A Chain A, Hetero Sam Domain Structure Of Ph And Scm.
pdb|1PK1|C Chain C, Hetero Sam Domain Structure Of Ph And Scm
Length = 89
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 509 WSTEDVREWVRQI-GFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNGIQRRRFEREL 567
WS +DV ++R++ G +Y ++F++ +DG LL L E+HL + G G R+ ++
Sbjct: 17 WSVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLLLKEKHLVNAXGXKLG-PARKIVAKV 75
Query: 568 QNLKKMAD 575
+++K++ D
Sbjct: 76 ESIKEVRD 83
>pdb|1KW4|A Chain A, Polyhomeotic Sam Domain Structure
Length = 89
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 509 WSTEDVREWVRQI-GFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNG 557
WS +DV ++R++ G +Y ++F++ +DG LL+L E+HL + G G
Sbjct: 17 WSVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLRLKEKHLVNAXGXKLG 66
>pdb|3TAD|C Chain C, Crystal Structure Of The Liprin-AlphaLIPRIN-Beta Complex
pdb|3TAD|D Chain D, Crystal Structure Of The Liprin-AlphaLIPRIN-Beta Complex
Length = 265
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 509 WSTEDVREWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNGIQRRRFERELQ 568
W+ E V W+ + G Y ++ + G LLQ +++ L ++GI + + R++ + LQ
Sbjct: 18 WTKEQVCSWLAEQGLGSYLSSGKHWIISGQTLLQASQQDLEKELGIKHSLHRKKLQLALQ 77
Query: 569 NL--KKMADYSSKDVTNLNNFLLNLGQEFSIYTYSMLNAGVDKDSIKALSEEQLICECGI 626
L ++ +Y D + +L ++G Y VD + ++ + L+ +
Sbjct: 78 ALGSEEETNYGKLDFNWVTRWLDDIG--LPQYKTQFDEGRVDGRMLHYMTVDDLLS-LKV 134
Query: 627 HNSIHRLRIMEAI 639
+ +H L I AI
Sbjct: 135 VSVLHHLSIKRAI 147
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 474 KVASCPNAVASKYAAQTLRLIGETVPHKLSQ-----------QVPLWSTEDVREWVRQIG 522
KV S + ++ K A Q LR I P+ L + +V W+ V EW+R +
Sbjct: 133 KVVSVLHHLSIKRAIQVLR-INNFEPNCLRRRPSDENSITPSEVQQWTNHRVMEWLRSVD 191
Query: 523 FAEYANNFVESRVDGDLLL 541
AEYA N S V G L++
Sbjct: 192 LAEYAPNLRGSGVHGGLMV 210
>pdb|3BQ7|A Chain A, Sam Domain Of Diacylglycerol Kinase Delta1 (E35g)
pdb|3BQ7|B Chain B, Sam Domain Of Diacylglycerol Kinase Delta1 (E35g)
pdb|3BQ7|C Chain C, Sam Domain Of Diacylglycerol Kinase Delta1 (E35g)
pdb|3BQ7|D Chain D, Sam Domain Of Diacylglycerol Kinase Delta1 (E35g)
pdb|3BQ7|E Chain E, Sam Domain Of Diacylglycerol Kinase Delta1 (E35g)
pdb|3BQ7|F Chain F, Sam Domain Of Diacylglycerol Kinase Delta1 (E35g)
Length = 81
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 503 SQQVPLWSTEDVREWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRD 550
++ V LW TE+V W+ + EY + F + G LL L L+D
Sbjct: 4 TRPVHLWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSGLLHLERRDLKD 51
>pdb|2DKZ|A Chain A, Solution Structure Of The Sam_pnt-Domain Of The
Hypothetical Protein Loc64762
Length = 84
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 510 STEDVREWVRQIGFAE-YANNFVESRVDGDLLLQLNEEHLRDD 551
S E+V + +R IG +E + FV ++DG+LL+QL EE L +D
Sbjct: 19 SIEEVSKSLRFIGLSEDVISFFVTEKIDGNLLVQLTEEILSED 61
>pdb|2F3N|A Chain A, Crystal Structure Of The Native Shank Sam Domain.
pdb|2F3N|B Chain B, Crystal Structure Of The Native Shank Sam Domain.
pdb|2F3N|C Chain C, Crystal Structure Of The Native Shank Sam Domain.
pdb|2F44|A Chain A, Crystal Structure Of The Zinc-Bound Shank Sam Domain
pdb|2F44|B Chain B, Crystal Structure Of The Zinc-Bound Shank Sam Domain
pdb|2F44|C Chain C, Crystal Structure Of The Zinc-Bound Shank Sam Domain
Length = 76
Score = 34.3 bits (77), Expect = 0.33, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 508 LWSTEDVREWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNGIQRRRFEREL 567
LWS DV +W+ I E+ + F + ++G L L +E ++G+ R ER L
Sbjct: 4 LWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKEDFV-ELGVTRVGHRENIERAL 62
Query: 568 QNL 570
+ L
Sbjct: 63 RQL 65
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 31/142 (21%)
Query: 256 KVVRVACVCTKNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTV 304
++V +N N VE +R +G L +L H EG + + GG+ D+V
Sbjct: 192 QMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLA-IFKSGGIPALVNMLGSPVDSV 250
Query: 305 LFECRKNDIETLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA-- 362
LF L H GA + L GG + A++ N N+K+ A
Sbjct: 251 LFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAIT 296
Query: 363 --CLAIAVLVANTEIEAAVLKS 382
CL I + N E + +L S
Sbjct: 297 TDCLQI-LAYGNQESKLIILAS 317
>pdb|3SEI|A Chain A, Crystal Structure Of Caskin1 Tandem Sams
pdb|3SEI|B Chain B, Crystal Structure Of Caskin1 Tandem Sams
Length = 149
Score = 33.1 bits (74), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 5/134 (3%)
Query: 510 STEDVREWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNGIQRRRFERELQN 569
S+E V +W+ YA NF+ + D + ++ E L IG+ R++ E+
Sbjct: 9 SSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRMTPEDL-TAIGVTKPGHRKKIAAEISG 67
Query: 570 LKKMADYSSKDVTNLNNFLLNLGQEFSIYTYSMLNAGVDK-DSIKALSEEQLICECGIHN 628
L NL +L +G + Y +++ G + D I ++ E L E GI
Sbjct: 68 LSIPDWLPEHKPANLAVWLSMIG--LAQYYKVLVDNGYENIDFITDITWEDL-QEIGITK 124
Query: 629 SIHRLRIMEAIHEI 642
H+ ++M A+ ++
Sbjct: 125 LGHQKKLMLAVRKL 138
>pdb|2GLE|A Chain A, Solution Structure Of Neurabin Sam Domain
Length = 74
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 509 WSTEDVREWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNGIQRRRFERELQ 568
WS + V W+ + +Y + F + G+ LLQL+ L+ +G+ + R +++L+
Sbjct: 7 WSVQQVSHWLVGLSLDQYVSEFSAQNISGEQLLQLDGNKLK-ALGMTSSQDRALVKKKLK 65
Query: 569 NLK 571
+K
Sbjct: 66 EMK 68
>pdb|2KE7|A Chain A, Nmr Structure Of The First Sam Domain From Aida1
Length = 103
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 507 PLWSTEDVREWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRD--DIGIHNGIQRRRFE 564
P + V +W+ IG +Y N+ + + D + N +D +IGI N R+R
Sbjct: 18 PRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRIL 77
Query: 565 RELQNLKKM 573
+ +Q L KM
Sbjct: 78 QAIQLLPKM 86
>pdb|3SEN|A Chain A, Structure Of Caskin1 Tandem Sams
pdb|3SEN|B Chain B, Structure Of Caskin1 Tandem Sams
pdb|3SEN|C Chain C, Structure Of Caskin1 Tandem Sams
pdb|3SEN|D Chain D, Structure Of Caskin1 Tandem Sams
Length = 157
Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Query: 510 STEDVREWVRQIGFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNGIQRRRFERELQN 569
S+E V +W+ YA NF+ + D + ++ E L IG+ R++ E+
Sbjct: 17 SSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRMTPEDL-TAIGVTKPGHRKKIAAEISG 75
Query: 570 LKKMADYSSKDVTNLNNFLLNLGQEFSIYTYSMLNAGVDK-DSIKALSEEQLICECGIHN 628
L NL +L +G + Y +++ G + D I ++ E L E GI
Sbjct: 76 LSIPDWLPEHKPANLAVWLSMIG--LAQYYKVLVDNGYENIDFITDITWEDLQ-EIGITK 132
Query: 629 SIHRLRIMEAIHEIEREWNKEY 650
H+ ++M A+ ++ EY
Sbjct: 133 LGHQKKLMLAVRKLAELQKAEY 154
>pdb|3SLA|A Chain A, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|B Chain B, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|C Chain C, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|D Chain D, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|E Chain E, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
Length = 168
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 65 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 123
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 124 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 165
>pdb|3SL9|A Chain A, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|B Chain B, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|E Chain E, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|G Chain G, X-Ray Structure Of Beta Catenin In Complex With Bcl9
Length = 167
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 65 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 123
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 124 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 165
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
pdb|2GL7|D Chain D, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
Length = 550
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 31/132 (23%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 67 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 125
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAIAVLV 370
L H GA + L GG + A++ N N+K+ A CL I +
Sbjct: 126 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI-LAY 170
Query: 371 ANTEIEAAVLKS 382
N E + +L S
Sbjct: 171 GNQESKLIILAS 182
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region
And Its C-Terminal Domain
Length = 644
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 31/132 (23%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 66 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 124
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAIAVLV 370
L H GA + L GG + A++ N N+K+ A CL I +
Sbjct: 125 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI-LAY 169
Query: 371 ANTEIEAAVLKS 382
N E + +L S
Sbjct: 170 GNQESKLIILAS 181
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|B Chain B, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|C Chain C, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
Length = 540
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 31/132 (23%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 73 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 131
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAIAVLV 370
L H GA + L GG + A++ N N+K+ A CL I +
Sbjct: 132 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI-LAY 176
Query: 371 ANTEIEAAVLKS 382
N E + +L S
Sbjct: 177 GNQESKLIILAS 188
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex
pdb|1I7X|C Chain C, Beta-CateninE-Cadherin Complex
pdb|1I7W|A Chain A, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1I7W|C Chain C, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1JPP|A Chain A, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1JPP|B Chain B, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1M1E|A Chain A, Beta-Catenin Armadillo Repeat Domain Bound To Icat
pdb|1V18|A Chain A, The Crystal Structure Of Beta-Catenin Armadillo Repeat
Complexed With A Phosphorylated Apc 20mer Repeat
Length = 538
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 70 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 128
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 129 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 170
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1
pdb|3OUX|A Chain A, Structure Of Beta-Catenin With Phosphorylated Lef-1
Length = 540
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 31/132 (23%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 72 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 130
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAIAVLV 370
L H GA + L GG + A++ N N+K+ A CL I +
Sbjct: 131 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI-LAY 175
Query: 371 ANTEIEAAVLKS 382
N E + +L S
Sbjct: 176 GNQESKLIILAS 187
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex
Length = 527
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 67 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 125
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 126 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 167
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL
DomainUNPHOSPHORYLATED APC R3
Length = 519
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 58 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 116
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 117 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 158
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4
Length = 529
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 69 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 127
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 128 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 169
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta-
Catenin
Length = 533
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 71 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 129
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 130 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 171
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX
Length = 514
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 54 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 112
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 113 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 154
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled
Peptide Inhibitor
Length = 518
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 56 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 114
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 115 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 156
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1G3J|C Chain C, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1TH1|A Chain A, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
pdb|1TH1|B Chain B, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
Length = 532
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 71 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 129
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 130 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 171
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 516
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 30/116 (25%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 54 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKMLGSPVDSVLFYAITTLHN 112
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAI 366
L H GA + L GG + A++ N N+K+ A CL I
Sbjct: 113 LLLHQEGAKMAVRLAGGLQKMVALL--------------NKTNVKFLAITTDCLQI 154
>pdb|3BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 470
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 31/132 (23%)
Query: 266 KNINSVEHSRVGTGILEHLFKHSEGTCSDVIGLGGL-----------DTVLFECRKNDIE 314
+N N VE +R G L +L H EG + + GG+ D+VLF
Sbjct: 11 QNTNDVETARCTAGTLHNLSHHREGLLA-IFKSGGIPALVKXLGSPVDSVLFYAITTLHN 69
Query: 315 TLRHCAGALANLSLYGGAENQEAMIKRKVPVWLFPLAFHNDDNIKYYA----CLAIAVLV 370
L H GA + L GG + A++ N N+K+ A CL I +
Sbjct: 70 LLLHQEGAKXAVRLAGGLQKXVALL--------------NKTNVKFLAITTDCLQI-LAY 114
Query: 371 ANTEIEAAVLKS 382
N E + +L S
Sbjct: 115 GNQESKLIILAS 126
>pdb|2EAN|A Chain A, Solution Structure Of The N-Terminal Sam-Domain Of Human
Kiaa0902 Protein (Connector Enhancer Of Kinase
Suppressor Of Ras 2)
Length = 83
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 509 WSTEDVREWVRQIG--FAEYANNFVESRVDGDLLLQLNEEHLRD 550
WS V +W++ + +Y NF ++ GD LL++ + L D
Sbjct: 11 WSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELED 54
>pdb|3BS7|A Chain A, Crystal Structure Of The Sterile Alpha Motif (Sam) Domain
Of HyphenAVEUGLE
pdb|3BS7|B Chain B, Crystal Structure Of The Sterile Alpha Motif (Sam) Domain
Of HyphenAVEUGLE
Length = 78
Score = 30.0 bits (66), Expect = 7.0, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 504 QQVPLWSTEDVREWVRQI--GFAEYANNFVESRVDGDLLLQLNEEHLRDDIGIHNGIQRR 561
+ V LW+ DV +W R+ + +Y F + + G LL++ + L+ +G+ + R
Sbjct: 1 KAVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQ-RMGVTDNRDRE 59
Query: 562 RFEREL--QNLK 571
RE+ Q LK
Sbjct: 60 AIWREIVKQRLK 71
>pdb|1COZ|A Chain A, Ctp:glycerol-3-Phosphate Cytidylyltransferase From
Bacillus Subtilis
pdb|1COZ|B Chain B, Ctp:glycerol-3-Phosphate Cytidylyltransferase From
Bacillus Subtilis
pdb|1N1D|A Chain A, Glycerol-3-phosphate Cytidylyltransferase Complexed With
Cdp-glycerol
pdb|1N1D|B Chain B, Glycerol-3-phosphate Cytidylyltransferase Complexed With
Cdp-glycerol
pdb|1N1D|C Chain C, Glycerol-3-phosphate Cytidylyltransferase Complexed With
Cdp-glycerol
pdb|1N1D|D Chain D, Glycerol-3-phosphate Cytidylyltransferase Complexed With
Cdp-glycerol
Length = 129
Score = 29.6 bits (65), Expect = 7.8, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 627 HNSIHRLRIMEAIHEI-----EREWNKEYEDNPDKNLDVFI 662
H+ HR I+E I + E+ W ++ +D D N+DVF+
Sbjct: 50 HSYEHRKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFV 90
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,943,949
Number of Sequences: 62578
Number of extensions: 1003835
Number of successful extensions: 2235
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2184
Number of HSP's gapped (non-prelim): 46
length of query: 979
length of database: 14,973,337
effective HSP length: 108
effective length of query: 871
effective length of database: 8,214,913
effective search space: 7155189223
effective search space used: 7155189223
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)