BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4859
(102 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DM5|A Chain A, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|B Chain B, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|C Chain C, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|D Chain D, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|E Chain E, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|F Chain F, Annexin Xii E105k Homohexamer Crystal Structure
Length = 315
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V+ V+++ +Y A RL AM G+GT DKTLIRI+V+RSEI D
Sbjct: 237 IVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEI-------------------D 277
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
L +IK+ F +YGK+L E+I DDCSGDYK LLL +
Sbjct: 278 LANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITG 314
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 24/101 (23%)
Query: 6 VVQ-CVKDKSSYLARR----LKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVT 60
VVQ VK +S+ +R L+ AM GIGTD+K++ I+ TRS
Sbjct: 1 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSN--------------AQ 46
Query: 61 RSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
R +I K ++ L+GK LE+ +K + SG+Y+ LAL+
Sbjct: 47 RQQI-----KTDYTTLFGKHLEDELKSELSGNYEAAALALL 82
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 19/86 (22%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
+LA +L AM G+GTD LI I+ T+S + IK F KL
Sbjct: 88 FLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAF-KL------------------ 128
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALV 101
LY + LE+ I + SG+++RLL++++
Sbjct: 129 LYKEDLEKEIISETSGNFQRLLVSML 154
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 39 IVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLL 98
I E +G + F + TRS L I + K+ KT+ + I+++ SGD K LL
Sbjct: 176 IYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLL 235
Query: 99 ALV 101
A+V
Sbjct: 236 AIV 238
>pdb|1AEI|A Chain A, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|B Chain B, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|C Chain C, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|D Chain D, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|E Chain E, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|F Chain F, Crystal Structure Of The Annexin Xii Hexamer
Length = 315
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V+ V+++ +Y A RL AM G+GT DKTLIRI+V+RSEI D
Sbjct: 237 IVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEI-------------------D 277
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
L +IK+ F +YGK+L E+I DDCSGDYK LLL +
Sbjct: 278 LANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITG 314
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 24/101 (23%)
Query: 6 VVQ-CVKDKSSYLARR----LKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVT 60
VVQ VK +S+ +R L+ AM GIGTD+K++ I+ TRS
Sbjct: 1 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSN--------------AQ 46
Query: 61 RSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
R +I K ++ L+GK LE+ +K + SG+Y+ LAL+
Sbjct: 47 RQQI-----KTDYTTLFGKHLEDELKSELSGNYEAAALALL 82
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 19/86 (22%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
+LA +L AM G+GTD+ LI I+ T+S + IK F KL
Sbjct: 88 FLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAF-KL------------------ 128
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALV 101
LY + LE+ I + SG+++RLL++++
Sbjct: 129 LYKEDLEKEIISETSGNFQRLLVSML 154
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 39 IVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLL 98
I E +G + F + TRS L I + K+ KT+ + I+++ SGD K LL
Sbjct: 176 IYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLL 235
Query: 99 ALV 101
A+V
Sbjct: 236 AIV 238
>pdb|1ANN|A Chain A, Annexin Iv
Length = 318
Score = 82.0 bits (201), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V+C+++KS+Y A RL +M G+GTDD TLIR++V+R+EID+ D
Sbjct: 238 IVKCMRNKSAYFAERLYKSMKGLGTDDDTLIRVMVSRAEIDMLD---------------- 281
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
I+ NF +LYGK+L +IK D SGDY+++LL L
Sbjct: 282 ---IRANFKRLYGKSLYSFIKGDTSGDYRKVLLIL 313
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
Y + L+ AM G GTD+ LI I+ +R T EI I Q +
Sbjct: 89 YDVQELRKAMKGAGTDEGCLIEILASR-----------------TPEEIRR--INQTYQL 129
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALVA 102
YG++LE+ I+ D S ++R+L++L A
Sbjct: 130 QYGRSLEDDIRSDTSFMFQRVLVSLSA 156
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L+ AM G+GTD+ +I ++ RS R E I+ +
Sbjct: 19 AQTLRKAMKGLGTDEDAIINVLAYRST--------------AQRQE-----IRTAYKTTI 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + SG++++++L ++
Sbjct: 60 GRDLMDDLKSELSGNFEQVILGMM 83
>pdb|1AOW|A Chain A, Annexin Iv
Length = 309
Score = 82.0 bits (201), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V+C+++KS+Y A RL +M G+GTDD TLIR++V+R+EID
Sbjct: 229 IVKCMRNKSAYFAERLYKSMKGLGTDDDTLIRVMVSRAEID------------------- 269
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+ DI+ NF +LYGK+L +IK D SGDY+++LL L
Sbjct: 270 MLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLIL 304
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
Y + ++ AM G GTD+ LI I+ +R T EI I Q +
Sbjct: 80 YDVQEVRKAMKGAGTDEGCLIEILASR-----------------TPEEIRR--INQTYQL 120
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALVA 102
YG++LE+ I+ D S ++R+L++L A
Sbjct: 121 QYGRSLEDDIRSDTSFMFQRVLVSLSA 147
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L+ AM G+GTD+ +I ++ RS R E I+ +
Sbjct: 10 AQTLRKAMKGLGTDEDAIINVLAYRST--------------AQRQE-----IRTAYKTTI 50
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + SG++++++L ++
Sbjct: 51 GRDLMDDLKSELSGNFEQVILGMM 74
>pdb|1I4A|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant T6d
Of Annexin Iv
Length = 318
Score = 82.0 bits (201), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V+C+++KS+Y A RL +M G+GTDD TLIR++V+R+EID+ D
Sbjct: 238 IVKCMRNKSAYFAERLYKSMKGLGTDDDTLIRVMVSRAEIDMLD---------------- 281
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
I+ NF +LYGK+L +IK D SGDY+++LL L
Sbjct: 282 ---IRANFKRLYGKSLYSFIKGDTSGDYRKVLLIL 313
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
Y + L+ AM G GTD+ LI I+ +R T EI I Q +
Sbjct: 89 YDVQELRKAMKGAGTDEGCLIEILASR-----------------TPEEIRR--INQTYQL 129
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALVA 102
YG++LE+ I+ D S ++R+L++L A
Sbjct: 130 QYGRSLEDDIRSDTSFMFQRVLVSLSA 156
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L+ AM G+GTD+ +I ++ RS R E I+ +
Sbjct: 19 AQTLRKAMKGLGTDEDAIINVLAYRST--------------AQRQE-----IRTAYKTTI 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + SG++++++L ++
Sbjct: 60 GRDLMDDLKSELSGNFEQVILGMM 83
>pdb|2ZHI|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.58 A Resolution
pdb|2ZHJ|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.34 A Resolution
Length = 322
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V+C+++K +Y A RL +M G+GTDD TLIR++V+R+EID+ D
Sbjct: 242 IVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLD---------------- 285
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
I+ NF +LYGK+L +IK D SGDY+++LL L
Sbjct: 286 ---IRANFKRLYGKSLYSFIKGDTSGDYRKVLLILCG 319
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 19/87 (21%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
Y + L+ AM G GTD+ LI I+ +R+ +I++ I Q + +
Sbjct: 93 YDVQELRRAMKGAGTDEGCLIEILASRNP---EEIRR----------------INQTYQQ 133
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALVA 102
YG++LEE I D S ++R+L++L A
Sbjct: 134 QYGRSLEEDICSDTSFMFQRVLVSLTA 160
>pdb|2ZOC|A Chain A, Crystal Structure Of Recombinant Human Annexin Iv
pdb|2ZOC|B Chain B, Crystal Structure Of Recombinant Human Annexin Iv
Length = 319
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V+C+++KS+Y A +L +M G+GTDD TLIR++V+R+EI D
Sbjct: 239 IVKCMRNKSAYFAEKLYKSMKGLGTDDNTLIRVMVSRAEI-------------------D 279
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+ DI+ +F +LYGK+L +IK D SGDY+++LL L
Sbjct: 280 MLDIRAHFKRLYGKSLYSFIKGDTSGDYRKVLLVL 314
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 19/87 (21%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
Y + L+ AM G GTD+ LI I+ +R T EI I Q + +
Sbjct: 90 YDVQELRRAMKGAGTDEGCLIEILASR-----------------TPEEIRR--ISQTYQQ 130
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALVA 102
YG++LE+ I+ D S ++R+L++L A
Sbjct: 131 QYGRSLEDDIRSDTSFMFQRVLVSLSA 157
>pdb|1W3W|A Chain A, The 2.1 Angstroem Resolution Structure Of Annexin A8
Length = 327
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 55/97 (56%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+C ++ SY A RL AM G GT D TLIR IV+RSEIDL N +K +
Sbjct: 247 VVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDL-----NLIKCH------- 294
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
F K+YGKTL I +D SGDYK LL+LV
Sbjct: 295 -------FKKMYGKTLSSMIMEDTSGDYKNALLSLVG 324
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 19/86 (22%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
Y A+ L DAM G+GT + +I I+ +R++ L +I +K Y E D
Sbjct: 97 YEAKELHDAMKGLGTKEGVIIEILASRTKNQLREI----MKAY----EED---------- 138
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALV 101
YG +LEE I+ D SG +R+L+ L+
Sbjct: 139 -YGSSLEEDIQADTSGYLERILVCLL 163
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L AM GIGT+++ +I ++ RS I ++F K F
Sbjct: 27 AETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSF---------------KAQF---- 67
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L E +K + SG ++RL++AL+
Sbjct: 68 GKDLTETLKSELSGKFERLIVALM 91
>pdb|1W45|A Chain A, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus.
pdb|1W45|B Chain B, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus
Length = 327
Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 55/97 (56%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+C ++ SY A RL AM G GT D TLIR IV+RSEIDL N +K +
Sbjct: 247 VVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDL-----NLIKCH------- 294
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
F K+YGKTL I +D SGDYK LL+LV
Sbjct: 295 -------FKKMYGKTLSSMIMEDTSGDYKNALLSLVG 324
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 19/86 (22%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
Y A+ L DAM G+GT + +I I+ +R++ L +I +K Y E D
Sbjct: 97 YEAKELHDAMKGLGTKEGVIIEILASRTKNQLREI----MKAY----EED---------- 138
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALV 101
YG +LEE I+ D SG +R+L+ L+
Sbjct: 139 -YGSSLEEDIQADTSGYLERILVCLL 163
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L AM GIGT+++ +I ++ RS I ++F K F
Sbjct: 27 AETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSF---------------KAQF---- 67
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L E +K + SG ++RL++AL+
Sbjct: 68 GKDLTETLKSELSGKFERLIVALM 91
>pdb|1XJL|A Chain A, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
pdb|1XJL|B Chain B, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
Length = 319
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+VQC+++K Y A RL D+M G GT DK LIRI+V+RSE+D+ LK
Sbjct: 239 LVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDM-------LK--------- 282
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
I+ F + YGK+L YI+ D GDY++ LL L
Sbjct: 283 ---IRSEFKRKYGKSLYYYIQQDTKGDYQKALLYL 314
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ +K + Y A LK +M G+GTD+ +LI II +R+ +L +I + + ++Y T
Sbjct: 79 ILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKT----- 133
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
LE+ I D SGD+++L++AL
Sbjct: 134 --------------DLEKDIISDTSGDFRKLMVALA 155
>pdb|1W7B|A Chain A, Annexin A2: Does It Induce Membrane Aggregation By A New
Multimeric State Of The Protein
Length = 339
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+VQC+++K Y A RL D+M G GT DK LIRI+V+RSE+D+ LK
Sbjct: 259 LVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDM-------LK--------- 302
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
I+ F + YGK+L YI+ D GDY++ LL L
Sbjct: 303 ---IRSEFKRKYGKSLYYYIQQDTKGDYQKALLYL 334
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ +K + Y A LK +M G+GTD+ +LI II +R+ +L +I + + ++Y T
Sbjct: 99 ILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKT----- 153
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
LE+ I D SGD+++L++AL
Sbjct: 154 --------------DLEKDIISDTSGDFRKLMVALA 175
>pdb|1HM6|A Chain A, X-Ray Structure Of Full-Length Annexin 1
pdb|1HM6|B Chain B, X-Ray Structure Of Full-Length Annexin 1
pdb|1MCX|A Chain A, Structure Of Full-Length Annexin A1 In The Presence Of
Calcium
Length = 346
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 19/97 (19%)
Query: 4 SYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSE 63
+ VV+C K + A +L AM GIGT KTLIRI+V+RSEI
Sbjct: 265 TVVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEI------------------ 306
Query: 64 IDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
D+ DIK + KLYG +L + I D+ GDY+++L+AL
Sbjct: 307 -DMNDIKACYQKLYGISLCQAILDETKGDYEKILVAL 342
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 19/92 (20%)
Query: 10 VKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDI 69
+K + + A L+ AM G+GTD+ TL I+ +R+ ++ +I + V + E+
Sbjct: 112 LKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINR------VYKEELK---- 161
Query: 70 KQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ L + I D SGDY++ LL+L
Sbjct: 162 ---------RDLAKDITSDTSGDYQKALLSLA 184
>pdb|2HYU|A Chain A, Human Annexin A2 With Heparin Tetrasaccharide Bound
pdb|2HYV|A Chain A, Human Annexin A2 With Heparin Hexasaccharide Bound
pdb|2HYW|A Chain A, Human Annexin A2 With Calcium Bound
pdb|2HYW|B Chain B, Human Annexin A2 With Calcium Bound
Length = 308
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+VQC+++K Y A RL D+M G GT DK LIRI+V+RSE+D+ LK
Sbjct: 228 LVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDM-------LK--------- 271
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
I+ F + YGK+L YI+ D GDY++ LL L
Sbjct: 272 ---IRSEFKRKYGKSLYYYIQQDTKGDYQKALLYL 303
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ +K + Y A LK +M G+GTD+ +LI II +R+ +L +I + + ++Y T
Sbjct: 68 ILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKT----- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
LE+ I D SGD+++L++AL
Sbjct: 123 --------------DLEKDIISDTSGDFRKLMVALA 144
>pdb|1ALA|A Chain A, Structure Of Chicken Annexin V At 2.25-Angstroms
Resolution
Length = 321
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+C++ +Y A L +M G GTDD TLIR++V+RSEIDL DI+ F
Sbjct: 240 VVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEF----------- 288
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
++NF K+L + I+ D SGDY++ LL L
Sbjct: 289 ----RKNF----AKSLYQMIQKDTSGDYRKALLLL 315
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 19/98 (19%)
Query: 4 SYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSE 63
+ +V ++ + A LK A+ G GT++K L I+ +R+ ++ QN
Sbjct: 79 TLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEV----QN---------- 124
Query: 64 IDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ +++ Y LE+ I + SG ++RLL+ L+
Sbjct: 125 -----IKQVYMQEYEANLEDKITGETSGHFQRLLVVLL 157
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 37 RIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRL 96
+++ E+ G ++ F+ + TRS L + ++ + G +EE I + SGD ++L
Sbjct: 177 QVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKL 236
Query: 97 LLALV 101
LLA+V
Sbjct: 237 LLAVV 241
>pdb|1AVC|A Chain A, Bovine Annexin Vi (Calcium-Bound)
Length = 673
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+C++ + Y A RL AM G+GT D TLIRI+V+RSE+D+ DI++ F R++
Sbjct: 245 VVKCIRSTAEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIF------RTK-- 296
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
Y K+L IK+D SG+YK+ LL L
Sbjct: 297 -----------YEKSLYSMIKNDTSGEYKKTLLKL 320
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+VQ VK+K + A +L +M G GT++KTL RI+V+RSE ID
Sbjct: 593 IVQSVKNKPLFFADKLYKSMKGAGTEEKTLTRIMVSRSE-------------------ID 633
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
L +I++ F++ Y K+L + I+ D SG + + LLA+
Sbjct: 634 LLNIRREFIEKYDKSLHQAIEGDTSGHFLKALLAI 668
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 19/89 (21%)
Query: 13 KSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQN 72
+ Y A++LK AM G GTD+K LI I+ TR T +EI I +
Sbjct: 436 PAHYDAKQLKKAMEGAGTDEKALIEILATR-----------------TNAEIQA--INKA 476
Query: 73 FLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ + Y KTLE+ + D SG +KR+L++L
Sbjct: 477 YKEDYHKTLEDALSSDTSGHFKRILISLA 505
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 65/149 (43%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRS---------------EIDL-----GDIKQNFLKL 57
A+ +KDA++GIGTD+K LI I+ +R+ E DL GD +F K+
Sbjct: 98 AKEIKDAISGIGTDEKCLIEILASRTNEQIHQLVAAYKDAYERDLEADITGDTSGHFRKM 157
Query: 58 YV-----TRSEIDL----------------GDIK------------------------QN 72
V TR E D+ G++K
Sbjct: 158 LVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDE 217
Query: 73 FLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+LK GK +E I+ + SGD+++L+LA+V
Sbjct: 218 YLKTTGKPIEASIRGELSGDFEKLMLAVV 246
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L +AM G G+D + +I +I +RS KQ R E I QN+ LY
Sbjct: 26 AETLYNAMKGFGSDKEAIINLITSRSN------KQ--------RQE-----ICQNYKSLY 66
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L +K + +G ++RL++ L+
Sbjct: 67 GKDLIADLKYELTGKFERLIVGLM 90
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 46 DLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
D ++ F+ + TRS DL + Q F+K+ +E IK + SGD + + +A+V
Sbjct: 539 DKSSLETRFMMILCTRSYPDLRRVFQEFVKMTNYDVEHTIKKEMSGDVRDVFVAIV 594
>pdb|1YII|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Ca2+
pdb|1YJ0|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Zn2+
Length = 320
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+C++ +Y A L +M G GTDD TLIR++V+RSEIDL DI+ F
Sbjct: 239 VVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEF----------- 287
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
++NF K+L + I+ D SGDY++ LL L
Sbjct: 288 ----RKNF----AKSLYQMIQKDTSGDYRKALLLL 314
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 19/98 (19%)
Query: 4 SYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSE 63
+ +V ++ + A LK A+ G GT++K L I+ +R+ ++ QN
Sbjct: 78 TLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEV----QN---------- 123
Query: 64 IDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ +++ Y LE+ I + SG ++RLL+ L+
Sbjct: 124 -----IKQVYMQEYEANLEDKITGETSGHFQRLLVVLL 156
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 37 RIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRL 96
+++ E+ G ++ F+ + TRS L + ++ + G +EE I + SGD ++L
Sbjct: 176 QVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKL 235
Query: 97 LLALV 101
LLA+V
Sbjct: 236 LLAVV 240
>pdb|1M9I|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant
T356d Of Annexin Vi
Length = 672
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+C++ Y A RL AM G+GT D TLIRI+V+RSE+D+ DI++ F R++
Sbjct: 244 VVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIF------RTK-- 295
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
Y K+L IK+D SG+YK+ LL L
Sbjct: 296 -----------YEKSLYSMIKNDTSGEYKKTLLKL 319
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+VQ VK+K + A +L +M G GTDDKTL RI+V+RSE ID
Sbjct: 592 IVQSVKNKPLFFADKLYKSMKGAGTDDKTLTRIMVSRSE-------------------ID 632
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
L +I++ F++ Y K+L + I+ D SGD+ + LLAL
Sbjct: 633 LLNIRREFIEKYDKSLHQAIEGDTSGDFLKALLAL 667
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 19/89 (21%)
Query: 13 KSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQN 72
+ Y A++LK AM G GTD+K LI I+ TR T +EI I +
Sbjct: 435 PAHYDAKQLKKAMEGAGTDEKALIEILATR-----------------TNAEIRA--INEA 475
Query: 73 FLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ + Y K+LE+ + D SG ++R+L++L
Sbjct: 476 YKEDYHKSLEDALSSDTSGHFRRILISLA 504
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L+ AM G+GTD+ T+I II RS + I+Q F K +F
Sbjct: 368 AKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTF---------------KSHF---- 408
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + SGD RL+L L+
Sbjct: 409 GRDLMTDLKSEISGDLARLILGLM 432
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 65/149 (43%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRS---------------EIDL-----GDIKQNFLKL 57
A+ +KDA++GIGTD+K LI I+ +R+ E DL GD +F K+
Sbjct: 97 AKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYERDLEADIIGDTSGHFQKM 156
Query: 58 YV-----TRSEIDL----------------GDIK------------------------QN 72
V TR E D+ G++K
Sbjct: 157 LVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDE 216
Query: 73 FLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+LK GK +E I+ + SGD+++L+LA+V
Sbjct: 217 YLKTTGKPIEASIRGELSGDFEKLMLAVV 245
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 46 DLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
D ++ F+ + TRS L + Q F+K+ +E IK + SGD + +A+V
Sbjct: 538 DKTSLETRFMTILCTRSYPHLRRVFQEFIKMTNYDVEHTIKKEMSGDVRDAFVAIV 593
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L AM G G+D + ++ II +RS R E+ Q++ LY
Sbjct: 25 AEALYTAMKGFGSDKEAILDIITSRSN--------------RQRQEV-----CQSYKSLY 65
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L +K + +G ++RL++ L+
Sbjct: 66 GKDLIADLKYELTGKFERLIVGLM 89
>pdb|1AIN|A Chain A, Crystal Structure Of Human Annexin I At 2.5 Angstroms
Resolution
Length = 314
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 19/97 (19%)
Query: 4 SYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSE 63
+ +V+C K ++ A +L AM G+GT K LIRI+V+RSEI
Sbjct: 233 TAIVKCATSKPAFFAEKLHQAMKGVGTRHKALIRIMVSRSEI------------------ 274
Query: 64 IDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
D+ DIK + K+YG +L + I D+ GDY+++L+AL
Sbjct: 275 -DMNDIKAFYQKMYGISLCQAILDETKGDYEKILVAL 310
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
V+ +K + + A L+ AM G+GTD+ TLI I+ +R+ ++ DI + V R E+
Sbjct: 76 VLALLKTPAQFDADELRAAMKGLGTDEDTLIEILASRTNKEIRDINR------VYREELK 129
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ L + I D SGD++ LL+L
Sbjct: 130 -------------RDLAKDITSDTSGDFRNALLSLA 152
>pdb|2RAN|A Chain A, Rat Annexin V Crystal Structure: Ca2+-Induced
Conformational Changes
Length = 316
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 237 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 291
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 292 --------------SLYSMIKGDTSGDYKKALLLL 312
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 78 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 121
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 122 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 154
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 18 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 58
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 59 GRDLVNDMKSELTGKFEKLIVALM 82
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 181 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 238
>pdb|2H0L|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 237 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 291
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 292 --------------SLYSMIKGDTSGDYKKALLLL 312
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 78 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 121
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+ +L+ L+
Sbjct: 122 ---IKQAYEEEYGSNLEDDVVGDTSGYYQEMLVVLL 154
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 18 AEVLRKAMEGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFETLF 58
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 59 GRDLVNDMKSELTGKFEKLIVALM 82
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 181 ELKWGTDEEEFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 238
>pdb|2H0K|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
pdb|2H0K|B Chain B, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 237 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 291
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 292 --------------SLYSMIKGDTSGDYKKALLLL 312
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 78 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 121
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 122 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 154
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 18 AEVLEKAMEGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFETLF 58
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 59 GRDLVNDMKSELTGKFEKLIVALM 82
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 181 ELKWGTDEEEFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 238
>pdb|2H0M|A Chain A, Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 60 GRDLVNDMKSELTGKFEKLIVALM 83
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 239
>pdb|1N44|A Chain A, Crystal Structure Of Annexin V R23e Mutant
Length = 319
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLEKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 60 GRDLVNDMKSELTGKFEKLIVALM 83
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 239
>pdb|1BCW|A Chain A, Recombinant Rat Annexin V, T72a Mutant
Length = 319
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 60 GRDLVNDMKSELAGKFEKLIVALM 83
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 239
>pdb|1BCZ|A Chain A, Recombinant Rat Annexin V, T72s Mutant
Length = 319
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + SG +++L++AL+
Sbjct: 60 GRDLVNDMKSELSGKFEKLIVALM 83
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 239
>pdb|1N42|A Chain A, Crystal Structure Of Annexin V R149e Mutant
Length = 319
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+ +L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTSGYYQEMLVVLL 155
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 60 GRDLVNDMKSELTGKFEKLIVALM 83
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 239
>pdb|1N41|A Chain A, Crystal Structure Of Annexin V K27e Mutant
Length = 319
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLRKAMEGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 60 GRDLVNDMKSELTGKFEKLIVALM 83
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 239
>pdb|1G5N|A Chain A, Annexin V Complex With Heparin Oligosaccharides
pdb|2IE6|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Xenon
pdb|2IE7|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Nitrous Oxide
Length = 318
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 237 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 291
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 292 --------------SLYSMIKGDTSGDYKKALLLL 312
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 78 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 121
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 122 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 154
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 18 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 58
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 59 GRDLVNDMKSELTGKFEKLIVALM 82
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 181 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 238
>pdb|1A8A|A Chain A, Rat Annexin V Complexed With Glycerophosphoserine
pdb|1A8B|A Chain A, Rat Annexin V Complexed With Glycerophosphoethanolamine
Length = 319
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 60 GRDLVNDMKSELTGKFEKLIVALM 83
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 239
>pdb|1BCY|A Chain A, Recombinant Rat Annexin V, T72k Mutant
Length = 319
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 239
>pdb|1BC0|A Chain A, Recombinant Rat Annexin V, W185a Mutant
Length = 319
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D SG Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + +G +++L++AL+
Sbjct: 60 GRDLVNDMKSELTGKFEKLIVALM 83
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + SG+ + LLLA+V
Sbjct: 182 ELKAGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVV 239
>pdb|1AXN|A Chain A, The High Resolution Structure Of Annexin Iii Shows
Differences With Annexin V
Length = 323
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V CV++ ++LA RL A+ GIGTD+ TL RI+V+RSEIDL DI R+E
Sbjct: 243 IVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDI----------RTE-- 290
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
F K YG +L IK D SGDY+ LL +
Sbjct: 291 -------FKKHYGYSLYSAIKSDTSGDYEITLLKI 318
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V V + + A++LK +M G GT++ LI I+ TR+ +Q
Sbjct: 84 MVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTS------RQ------------- 124
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ DI Q + +Y K+L + I + SGD+++ LL L
Sbjct: 125 MKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLA 160
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A ++ A+ GIGTD+K LI I+ RS +Q +K Y Y
Sbjct: 24 AEAIQKAIRGIGTDEKMLISILTERSNAQ----RQLIVKEYQA---------------AY 64
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L++ +K D SG ++ L++ALV
Sbjct: 65 GKELKDDLKGDLSGHFEHLMVALV 88
>pdb|1BC3|A Chain A, Recombinant Rat Annexin V, Triple Mutant (T72k, S144k,
S228k)
Length = 319
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTSGDYKKALLLL 313
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D G Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTKGYYQRMLVVLL 155
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + G +++L++AL+
Sbjct: 60 GRDLVNDMKSELKGKFEKLIVALM 83
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + G+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETKGNLENLLLAVV 239
>pdb|1AII|A Chain A, Annexin Iii
Length = 323
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V CV++ ++LA RL A+ GIGTD+ TL RI+V+RSEIDL DI R+E
Sbjct: 243 IVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDI----------RTE-- 290
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
F K YG +L IK D SGDY+ LL +
Sbjct: 291 -------FKKHYGYSLYSAIKSDTSGDYEITLLKI 318
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V V + + A++LK +M G GT++ LI I+ TR+ +Q
Sbjct: 84 MVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTS------RQ------------- 124
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ DI Q + +Y K+L + I + SGD+++ LL L
Sbjct: 125 MKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLA 160
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A ++ A+ GIGTD+K LI I+ RS +Q +K Y Y
Sbjct: 24 AEAIQKAIRGIGTDEKMLISILTERSNAQ----RQLIVKEYQA---------------AY 64
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L++ +K D SG ++ L++ALV
Sbjct: 65 GKELKDDLKGDLSGHFEHLMVALV 88
>pdb|1HVE|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
pdb|1HVG|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR++V+RSEIDL +I++ F K + T
Sbjct: 239 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVMVSRSEIDLFNIRKEFRKNFAT----- 293
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 294 --------------SLYSMIKGDTSGDYKKALLLL 314
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GT++K L II +R+ +L R+
Sbjct: 80 IVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEEL-------------RA--- 123
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG +LE+ + D SG Y+R+L+ L+
Sbjct: 124 ---IKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 156
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+++++ ++ +RS R EI F L+
Sbjct: 20 AETLRKAMKGLGTDEESILTLLTSRSN--------------AQRQEISAA-----FKTLF 60
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + +G +++L++AL+
Sbjct: 61 GRDLLDDLKSELTGKFQKLIVALM 84
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 9 CVKDKSSYLARRL-------KDAMAGIGTDDKTL---IRIIVTRSEIDLGDIKQNFLKLY 58
V D S Y R L +D AGI D+ + + + E+ G ++ F+ ++
Sbjct: 140 VVGDTSGYYQRMLVVLLQANRDPDAGI--DEAQVEQDAQALFQAGELKWGTDEEKFITIF 197
Query: 59 VTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
TRS L + ++ + G +EE I + SG+ ++LLLA+V
Sbjct: 198 GTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVV 240
>pdb|1ANW|A Chain A, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANW|B Chain B, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANX|A Chain A, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|B Chain B, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|C Chain C, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
Length = 319
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR++V+RSEIDL +I++ F K + T
Sbjct: 239 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVMVSRSEIDLFNIRKEFRKNFAT----- 293
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 294 --------------SLYSMIKGDTSGDYKKALLLL 314
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GT++K L II +R+ +L R+
Sbjct: 80 IVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEEL-------------RA--- 123
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG +LE+ + D SG Y+R+L+ L+
Sbjct: 124 ---IKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 156
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+++++ ++ +RS R EI F L+
Sbjct: 20 AETLRKAMKGLGTDEESILTLLTSRSN--------------AQRQEISAA-----FKTLF 60
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + +G +++L++AL+
Sbjct: 61 GRDLLDDLKSELTGKFEKLIVALM 84
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 9 CVKDKSSYLARRL-------KDAMAGIGTDDKTL---IRIIVTRSEIDLGDIKQNFLKLY 58
V D S Y R L +D AGI D+ + + + E+ G ++ F+ ++
Sbjct: 140 VVGDTSGYYQRMLVVLLQANRDPDAGI--DEAQVEQDAQALFQAGELKWGTDEEKFITIF 197
Query: 59 VTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
TRS L + ++ + G +EE I + SG+ ++LLLA+V
Sbjct: 198 GTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVV 240
>pdb|1HVD|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR++V+RSEIDL +I++ F K + T
Sbjct: 239 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVMVSRSEIDLFNIRKEFRKNFAT----- 293
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 294 --------------SLYSMIKGDTSGDYKKALLLL 314
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GT++K L II +R+ +L R+
Sbjct: 80 IVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEEL-------------RA--- 123
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG +LE+ + D SG Y+R+L+ L+
Sbjct: 124 ---IKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 156
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+++++ ++ +RS R EI F L+
Sbjct: 20 AETLRKAMKGLGTDEESILTLLTSRSN--------------AQRQEISAA-----FKTLF 60
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + +G +++L++AL+
Sbjct: 61 GRDLLDDLKSELTGKFEKLIVALM 84
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 9 CVKDKSSYLARRL-------KDAMAGIGTDDKTL---IRIIVTRSEIDLGDIKQNFLKLY 58
V D S Y R L +D AGI D+ + + + E+ G ++ F+ ++
Sbjct: 140 VVGDTSGYYQRMLVVLLQANRDPDAGI--DEAQVEQDAQALFQAGELKWGTDEEKFITIF 197
Query: 59 VTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
TRS L + ++ + G +EE I + SG+ ++LLLA+V
Sbjct: 198 GTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVV 240
>pdb|1AVH|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1AVH|B Chain B, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1HAK|B Chain B, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1HAK|A Chain A, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1AVR|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
Length = 320
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR++V+RSEIDL +I++ F K + T
Sbjct: 240 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVMVSRSEIDLFNIRKEFRKNFAT----- 294
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 295 --------------SLYSMIKGDTSGDYKKALLLL 315
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GT++K L II +R+ +L R+
Sbjct: 81 IVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEEL-------------RA--- 124
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG +LE+ + D SG Y+R+L+ L+
Sbjct: 125 ---IKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 157
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+++++ ++ +RS R EI F L+
Sbjct: 21 AETLRKAMKGLGTDEESILTLLTSRSN--------------AQRQEISAA-----FKTLF 61
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + +G +++L++AL+
Sbjct: 62 GRDLLDDLKSELTGKFEKLIVALM 85
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 9 CVKDKSSYLARRL-------KDAMAGIGTDDKTL---IRIIVTRSEIDLGDIKQNFLKLY 58
V D S Y R L +D AGI D+ + + + E+ G ++ F+ ++
Sbjct: 141 VVGDTSGYYQRMLVVLLQANRDPDAGI--DEAQVEQDAQALFQAGELKWGTDEEKFITIF 198
Query: 59 VTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
TRS L + ++ + G +EE I + SG+ ++LLLA+V
Sbjct: 199 GTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVV 241
>pdb|1HVF|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR++V+RSEIDL +I++ F K + T
Sbjct: 239 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVMVSRSEIDLFNIRKEFRKNFAT----- 293
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 294 --------------SLYSMIKGDTSGDYKKALLLL 314
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GT++K L II +R+ +L R+
Sbjct: 80 IVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEEL-------------RA--- 123
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG +LE+ + D SG Y+R+L+ L+
Sbjct: 124 ---IKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 156
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+++++ ++ +RS R EI F L+
Sbjct: 20 AETLRKAMKGLGTDEESILTLLTSRSN--------------AQRQEISAA-----FKTLF 60
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + +G +++L++AL+
Sbjct: 61 GRDLLDDLKSELTGKFQKLIVALM 84
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 9 CVKDKSSYLARRL-------KDAMAGIGTDDKTL---IRIIVTRSEIDLGDIKQNFLKLY 58
V D S Y R L +D AGI D+ + + + E+ G ++ F+ ++
Sbjct: 140 VVGDTSGYYQRMLVVLLQANRDPDAGI--DEAQVEQDAQALFQAGELKWGTDEEKFITIF 197
Query: 59 VTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
TRS L + ++ + G +EE I + SG+ ++LLLA+V
Sbjct: 198 GTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVV 240
>pdb|1SAV|A Chain A, Human Annexin V With Proline Substitution By Thioproline
Length = 320
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR++V+RSEIDL +I++ F K + T
Sbjct: 240 VVKSIRSIXAYLAETLYYAMKGAGTDDHTLIRVMVSRSEIDLFNIRKEFRKNFAT----- 294
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 295 --------------SLYSMIKGDTSGDYKKALLLL 315
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GT++K L II +R+ +L R+
Sbjct: 81 IVALMKXSRLYDAYELKHALKGAGTNEKVLTEIIASRTXEEL-------------RA--- 124
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG +LE+ + D SG Y+R+L+ L+
Sbjct: 125 ---IKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 157
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+++++ ++ +RS R EI F L+
Sbjct: 21 AETLRKAMKGLGTDEESILTLLTSRSN--------------AQRQEISAA-----FKTLF 61
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + +G +++L++AL+
Sbjct: 62 GRDLLDDLKSELTGKFEKLIVALM 85
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 9 CVKDKSSYLARRL-------KDAMAGIGTDDKTL---IRIIVTRSEIDLGDIKQNFLKLY 58
V D S Y R L +D AGI D+ + + + E+ G ++ F+ ++
Sbjct: 141 VVGDTSGYYQRMLVVLLQANRDXDAGI--DEAQVEQDAQALFQAGELKWGTDEEKFITIF 198
Query: 59 VTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
TRS L + ++ + G +EE I + SG+ ++LLLA+V
Sbjct: 199 GTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVV 241
>pdb|1BC1|A Chain A, Recombinant Rat Annexin V, Quadruple Mutant (T72k, S144k,
S228k, S303k)
Length = 319
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L AM G GTDD TLIR+IV+RSEIDL +I++ F K + T
Sbjct: 238 VVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFAT----- 292
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D GDYK+ LL L
Sbjct: 293 --------------SLYSMIKGDTKGDYKKALLLL 313
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +L R+
Sbjct: 79 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEEL-------------RA--- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG LE+ + D G Y+R+L+ L+
Sbjct: 123 ---IKQAYEEEYGSNLEDDVVGDTKGYYQRMLVVLL 155
Score = 32.3 bits (72), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS R + I + F L+
Sbjct: 19 AEVLRKAMKGLGTDEDSILNLLTARSN--------------AQRQQ-----IAEEFKTLF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + G +++L++AL+
Sbjct: 60 GRDLVNDMKSELKGKFEKLIVALM 83
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
E+ G ++ F+ + TRS L + ++ + G +EE I + G+ + LLLA+V
Sbjct: 182 ELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETKGNLENLLLAVV 239
>pdb|2XO2|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Azidohomoalanine
pdb|2XO3|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Homopropargylglycine
Length = 320
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 19/95 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
VV+ ++ +YLA L A G GTDD TLIR+ V+RSEIDL +I++ F K + T
Sbjct: 240 VVKSIRSIPAYLAETLYYAXKGAGTDDHTLIRVXVSRSEIDLFNIRKEFRKNFAT----- 294
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
+L IK D SGDYK+ LL L
Sbjct: 295 --------------SLYSXIKGDTSGDYKKALLLL 315
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V K Y A LK A+ G GT++K L II +R+ +L R+
Sbjct: 81 IVALXKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEEL-------------RA--- 124
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
IKQ + + YG +LE+ + D SG Y+R L+ L+
Sbjct: 125 ---IKQVYEEEYGSSLEDDVVGDTSGYYQRXLVVLL 157
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 9 CVKDKSSYLARRL-------KDAMAGIGTDDKTL---IRIIVTRSEIDLGDIKQNFLKLY 58
V D S Y R L +D AGI D+ + + + E+ G ++ F+ ++
Sbjct: 141 VVGDTSGYYQRXLVVLLQANRDPDAGI--DEAQVEQDAQALFQAGELKWGTDEEKFITIF 198
Query: 59 VTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
TRS L + + + G +EE I + SG+ ++LLLA+V
Sbjct: 199 GTRSVSHLRKVFDKYXTISGFQIEETIDRETSGNLEQLLLAVV 241
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 19/83 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ A G+GTD+++++ ++ +RS R EI F L+
Sbjct: 21 AETLRKAXKGLGTDEESILTLLTSRSN--------------AQRQEISAA-----FKTLF 61
Query: 78 GKTLEEYIKDDCSGDYKRLLLAL 100
G+ L + +K + +G +++L++AL
Sbjct: 62 GRDLLDDLKSELTGKFEKLIVAL 84
>pdb|1YCN|A Chain A, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|1YCN|B Chain B, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|2Q4C|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
pdb|2Q4C|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
Length = 317
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+QC+ Y L+ A+ GTD+ L RI+ TR+EIDL I + + + R+ I
Sbjct: 236 TIQCLTRPELYFVDVLRSAINKTGTDEGALTRIVTTRAEIDLKVIGEEYQR----RNSI- 290
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
LE+ I D GDY+++L+AL+
Sbjct: 291 --------------PLEKAITKDTRGDYEKMLVALL 312
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 52 QNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
Q +++ TR+ L +Q + Y K+LEE + +GD+++LL++LV
Sbjct: 104 QVLMEVACTRTSTQLLHARQAYHARYKKSLEEDVAHHTTGDFRKLLVSLV 153
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 19/81 (23%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A +L+ A G GT++ +I I+ RS +Q + I+Q + + Y
Sbjct: 17 AEQLRTAFEGWGTNEDLIISILAHRS------AEQRKV-------------IRQAYHETY 57
Query: 78 GKTLEEYIKDDCSGDYKRLLL 98
G+ L + + + S D++R +L
Sbjct: 58 GEDLLKTLDKELSNDFERAIL 78
>pdb|1DK5|A Chain A, Crystal Structure Of Annexin 24(Ca32) From Capsicum Annuum
pdb|1DK5|B Chain B, Crystal Structure Of Annexin 24(Ca32) From Capsicum Annuum
Length = 322
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 16 YLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLK 75
Y L+DA+ GT++ L R+I TR+E+DL I + K R I LG
Sbjct: 251 YFVEVLRDAINRRGTEEDHLTRVIATRAEVDLKIIADEYQK----RDSIPLG-------- 298
Query: 76 LYGKTLEEYIKDDCSGDYKRLLLALVA 102
I D GDY+ +LLAL+
Sbjct: 299 -------RAIAKDTRGDYESMLLALLG 318
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 51 KQNFL--KLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
K NF+ +L TRS +L ++ + Y K+LEE + +GD+++LL+ LV+
Sbjct: 109 KSNFVLVELACTRSPKELVLAREAYHARYKKSLEEDVAYHTTGDHRKLLVPLVS 162
>pdb|1N00|A Chain A, Annexin Gh1 From Cotton
Length = 321
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 19/94 (20%)
Query: 7 VQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDL 66
V+C+ Y + L+ A+ GTD+ L R++ TR+E+DL I Y R+ +
Sbjct: 241 VKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADE----YQRRNSV-- 294
Query: 67 GDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
L I D GDY++LLL L
Sbjct: 295 -------------PLTRAIVKDTHGDYEKLLLVL 315
Score = 33.5 bits (75), Expect = 0.030, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 52 QNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
Q +++ TRS L +Q + Y K+LEE + +GD+ +LLL LV+
Sbjct: 109 QVLMEIACTRSANQLLHARQAYHARYKKSLEEDVAHHTTGDFHKLLLPLVS 159
>pdb|3BRX|A Chain A, Crystal Structure Of Calcium-Bound Cotton Annexin Gh1
Length = 317
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 19/94 (20%)
Query: 7 VQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDL 66
V+C+ Y + L+ A+ GTD+ L R++ TR+E+DL I Y R+ +
Sbjct: 237 VKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADE----YQRRNSV-- 290
Query: 67 GDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
L I D GDY++LLL L
Sbjct: 291 -------------PLTRAIVKDTHGDYEKLLLVL 311
Score = 33.5 bits (75), Expect = 0.035, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 52 QNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
Q +++ TRS L +Q + Y K+LEE + +GD+ +LLL LV+
Sbjct: 105 QVLMEIACTRSANQLLHARQAYHARYKKSLEEDVAHHTTGDFHKLLLPLVS 155
>pdb|3CHJ|A Chain A, Crystal Structure Of Alpha-14 Giardin
pdb|3CHK|A Chain A, Calcium Bound Structure Of Alpha-14 Giardin
pdb|3CHL|A Chain A, Crystal Structure Of Alpha-14 Giardin With Magnesium Bound
Length = 337
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 4 SYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSE 63
S V+ K ++ L ++ A G GTD+K L+ +++T I+ ++++
Sbjct: 73 SLVLMLYKPRAQLLCELIRGATKGAGTDEKCLVDVLLT---IETHEVRE----------- 118
Query: 64 IDLGDIKQNFLKLYGKTLEEYIKDDCSGDY 93
I+Q + +LY +L + ++ DC Y
Sbjct: 119 -----IRQLYYQLYNDSLGDVVRKDCGDKY 143
>pdb|3EF0|A Chain A, The Structure Of Fcp1, An Essential Rna Polymerase Ii Ctd
Phosphatase
Length = 372
Score = 26.2 bits (56), Expect = 5.4, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 32 DKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKD 87
D +++ +I R D+ D N +K+ + +GDI NFL + LEE K+
Sbjct: 143 DTSMVVVIDDRG--DVWDWNPNLIKVVPYEFFVGIGDINSNFLSGNREALEEQNKE 196
>pdb|3C5J|B Chain B, Crystal Structure Of Hla Dr52c
Length = 190
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 48 GDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCS-GDYK 94
GD + FL+L + G + FL+ Y EE+++ D G+Y+
Sbjct: 1 GDTRPRFLELLKSECHFFNGTERVRFLERYFHNQEEFVRFDSDVGEYR 48
>pdb|1BO9|A Chain A, Nmr Solution Structure Of Domain 1 Of Human Annexin I
Length = 73
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 61 RSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
R+ IK +L+ GK L+E +K +G + ++LAL+
Sbjct: 32 RNNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLALL 72
>pdb|3KN1|A Chain A, Crystal Structure Of Golgi Phosphoprotein 3 N-Term
Truncation Variant
Length = 249
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 51 KQNFLKLYVTRSEIDLGDIKQNFL-KLYGKTLEEYIKDDCSGDYKRLLLALV 101
KQNFL T + +IKQ + K+ L++++ D D R LLAL+
Sbjct: 142 KQNFLLFDXTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPHRXD--RRLLALI 191
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.141 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,842,853
Number of Sequences: 62578
Number of extensions: 100604
Number of successful extensions: 533
Number of sequences better than 100.0: 57
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 245
Number of HSP's gapped (non-prelim): 200
length of query: 102
length of database: 14,973,337
effective HSP length: 67
effective length of query: 35
effective length of database: 10,780,611
effective search space: 377321385
effective search space used: 377321385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)