RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4859
(102 letters)
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein;
2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A
1ycn_A 2q4c_A 1dk5_A
Length = 321
Score = 95.0 bits (236), Expect = 4e-25
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
V+C+ Y + L+ A+ GTD+ L R++ TR+E+
Sbjct: 239 STVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVV-------------------CTRAEV 279
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
DL I + + L I D GDY++LLL L
Sbjct: 280 DLKVIADEYQRRNSVPLTRAIVKDTHGDYEKLLLVLA 316
Score = 57.3 bits (138), Expect = 3e-11
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
V+ D + A +A + ++ L+ I TRS L +Q + Y
Sbjct: 82 VLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHARY------- 134
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
K+LEE + +GD+ +LLL LV
Sbjct: 135 ------------KKSLEEDVAHHTTGDFHKLLLPLV 158
Score = 50.7 bits (121), Expect = 5e-09
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
+L+ A +G GT++ +I I+ R+ I++ + + Y
Sbjct: 22 CEQLRKAFSGWGTNEGLIIDIL-------------------GHRNAEQRNLIRKTYAETY 62
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + + + S D++RL+L
Sbjct: 63 GEDLLKALDKELSNDFERLVLLWA 86
Score = 44.2 bits (104), Expect = 1e-06
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L + ++ D +IR++ TRS+ + ++ Y
Sbjct: 177 AKLLHEKISNKAYSDDDVIRVLATRSKAQINATLNHYKNEY------------------- 217
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G + + +K D ++ LL + V
Sbjct: 218 GNDINKDLKADPKDEFLALLRSTV 241
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein
complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Length = 323
Score = 93.1 bits (231), Expect = 2e-24
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+V CV++ ++LA RL A+ GIGTD+ TL RI+V+RSEIDL DI+ F K Y
Sbjct: 242 AIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHY------ 295
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
G +L IK D SGDY+ LL +
Sbjct: 296 -------------GYSLYSAIKSDTSGDYEITLLKIC 319
Score = 63.8 bits (155), Expect = 1e-13
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V V + + A++LK +M G GT++ LI I+ TR+
Sbjct: 84 MVALVTPPAVFDAKQLKKSMKGAGTNEDALIEIL-------------------TTRTSRQ 124
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
+ DI Q + +Y K+L + I + SGD+++ LL L
Sbjct: 125 MKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLAD 161
Score = 52.6 bits (126), Expect = 1e-09
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A ++ A+ GIGTD+K LI I+ RS I + + Y
Sbjct: 24 AEAIQKAIRGIGTDEKMLISIL-------------------TERSNAQRQLIVKEYQAAY 64
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L++ +K D SG ++ L++ALV
Sbjct: 65 GKELKDDLKGDLSGHFEHLMVALV 88
Score = 36.8 bits (85), Expect = 4e-04
Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 20/86 (23%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
A+ L A GTD+ I+ RS L + +
Sbjct: 179 AQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNIS------------------ 220
Query: 77 YGKTLEEYIKDDCSGDYKRLLLALVA 102
K + + IK + SG ++ LLLA+V
Sbjct: 221 -QKDIVDSIKGELSGHFEDLLLAIVN 245
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein;
1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Length = 337
Score = 91.6 bits (227), Expect = 7e-24
Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 20/97 (20%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+ D A + A AG G+D L RI
Sbjct: 235 LAHDFLYDPCCAAAFSMNVAFAGSGSDSNRLNRITAMHFR-------------------- 274
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ K + K+YG+ +E + G Y + L
Sbjct: 275 ECKGCKYYYKKVYGQAFDERCATELKGVYGDAIKLLW 311
Score = 60.8 bits (147), Expect = 1e-12
Identities = 21/99 (21%), Positives = 44/99 (44%), Gaps = 21/99 (21%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
V+ K ++ L ++ A G GTD+K L+ ++ +T +
Sbjct: 75 VLMLYKPRAQLLCELIRGATKGAGTDEKCLVDVL-------------------LTIETHE 115
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDY--KRLLLALVA 102
+ +I+Q + +LY +L + ++ DC Y +L+ A+
Sbjct: 116 VREIRQLYYQLYNDSLGDVVRKDCGDKYMWAKLINAVAT 154
Score = 38.8 bits (90), Expect = 7e-05
Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 12 DKSSYLARRLKDAMAGIGTDDK--TLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDI 69
S+ + ++ + + K LI I + L ++++ F +
Sbjct: 7 QMSTGVTAVVQKVVEACQDESKRLDLIEIARSYPPNQLRNMQRTFQAIT----------- 55
Query: 70 KQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
G L+ ++K S D++ L+L L
Sbjct: 56 --------GTFLDAFLKKHLSKDFESLVLMLY 79
Score = 31.5 bits (71), Expect = 0.027
Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 21/87 (24%)
Query: 18 ARRLKDAMAGI---GTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFL 74
++ A+ + T IRI T + D + + + Y
Sbjct: 169 LVLVRKAIETKGVKKDEVSTWIRIFATYTRADFRQLHKMYSAKY---------------- 212
Query: 75 KLYGKTLEEYIKDDCSGDYKRLLLALV 101
G +L ++D+ G +
Sbjct: 213 --NGDSLRAGVEDEFQGLDEYAFKLAH 237
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation,
mutant T356D, lipid binding protein; 2.65A {Homo
sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Length = 672
Score = 92.8 bits (230), Expect = 1e-23
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+VQ VK+K + A +L +M G GTDDKTL RI+V+RSEIDL +I++ F++ Y
Sbjct: 591 AIVQSVKNKPLFFADKLYKSMKGAGTDDKTLTRIMVSRSEIDLLNIRREFIEKY------ 644
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
K+L + I+ D SGD+ + LLAL
Sbjct: 645 -------------DKSLHQAIEGDTSGDFLKALLALC 668
Score = 83.1 bits (205), Expect = 3e-20
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
VV+C++ Y A RL AM G+GT D TLIRI+ V+RSE+
Sbjct: 243 AVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIM-------------------VSRSEL 283
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
D+ DI++ F Y K+L IK+D SG+YK+ LL L
Sbjct: 284 DMLDIREIFRTKYEKSLYSMIKNDTSGEYKKTLLKLS 320
Score = 68.5 bits (167), Expect = 4e-15
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ + + Y A++LK AM G GTD+K LI I+ TR+ ++ I + + + Y
Sbjct: 428 ILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDY------- 480
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
K+LE+ + D SG ++R+L++L
Sbjct: 481 ------------HKSLEDALSSDTSGHFRRILISLAT 505
Score = 65.0 bits (158), Expect = 5e-14
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V ++ + A+ +KDA++GIGTD+K LI I+ +R+ + + + Y
Sbjct: 85 IVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAY------- 137
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ LE I D SG ++++L+ L+
Sbjct: 138 ------------ERDLEADIIGDTSGHFQKMLVVLL 161
Score = 51.9 bits (124), Expect = 2e-09
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L AM G G+D + ++ II +RS ++ Q++ LY
Sbjct: 25 AEALYTAMKGFGSDKEAILDII-------------------TSRSNRQRQEVCQSYKSLY 65
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L +K + +G ++RL++ L+
Sbjct: 66 GKDLIADLKYELTGKFERLIVGLM 89
Score = 47.3 bits (112), Expect = 1e-07
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L+ AM G+GTD+ T+I II RS + I+Q F +
Sbjct: 368 AKALRKAMKGLGTDEDTIIDII-------------------THRSNVQRQQIRQTFKSHF 408
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + SGD RL+L L+
Sbjct: 409 GRDLMTDLKSEISGDLARLILGLM 432
Score = 40.8 bits (95), Expect = 2e-05
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 20/85 (23%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
+ D +G + + + I+ TRS L + Q F+K+
Sbjct: 528 ILEIADTPSGDKTSLETRFMTILCTRS------YPH-------------LRRVFQEFIKM 568
Query: 77 YGKTLEEYIKDDCSGDYKRLLLALV 101
+E IK + SGD + +A+V
Sbjct: 569 TNYDVEHTIKKEMSGDVRDAFVAIV 593
Score = 38.9 bits (90), Expect = 1e-04
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 20/83 (24%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
+ L +A GTD+ I I+ RS+ L + +LK
Sbjct: 180 VQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTT------------------ 221
Query: 77 YGKTLEEYIKDDCSGDYKRLLLA 99
GK +E I+ + SGD+++L+LA
Sbjct: 222 -GKPIEASIRGELSGDFEKLMLA 243
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane
binding, matrix vessicle, protein and metal binding
protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A
1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A
1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A
1bcw_A 2ran_A ...
Length = 320
Score = 91.2 bits (226), Expect = 1e-23
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
VV+C++ +Y A L +M G GTDD TLIR++V+RSEIDL DI+ F K +
Sbjct: 238 AVVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNF------ 291
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
K+L + I+ D SGDY++ LL L
Sbjct: 292 -------------AKSLYQMIQKDTSGDYRKALLLLC 315
Score = 60.7 bits (147), Expect = 1e-12
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V ++ + A LK A+ G GT++K L I+ +R+ +
Sbjct: 80 MVSLMRPARIFDAHALKHAIKGAGTNEKVLTEIL-------------------ASRTPAE 120
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
+ +IKQ +++ Y LE+ I + SG ++RLL+ L+
Sbjct: 121 VQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLLQ 157
Score = 50.7 bits (121), Expect = 5e-09
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD++T+++I+ +R+ +I F L+
Sbjct: 20 AEALRKAMKGMGTDEETILKIL-------------------TSRNNAQRQEIASAFKTLF 60
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + +G ++ L+++L+
Sbjct: 61 GRDLVDDLKSELTGKFETLMVSLM 84
Score = 37.2 bits (86), Expect = 3e-04
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 20/85 (23%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
A+ L A GTD++T I I+ TRS L + ++ +
Sbjct: 175 AQVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTIS------------------ 216
Query: 77 YGKTLEEYIKDDCSGDYKRLLLALV 101
G +EE I + SGD ++LLLA+V
Sbjct: 217 -GFQIEETIDRETSGDLEKLLLAVV 240
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein,
helix BUN heparin, hexasaccharide, metal binding
protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB:
2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Length = 308
Score = 90.4 bits (224), Expect = 1e-23
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+VQC+++K Y A RL D+M G GT DK LIRI+V+RSE+D+ I+ F + Y
Sbjct: 227 NLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKY------ 280
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
GK+L YI+ D GDY++ LL L
Sbjct: 281 -------------GKSLYYYIQQDTKGDYQKALLYLC 304
Score = 65.3 bits (159), Expect = 3e-14
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ +K + Y A LK +M G+GTD+ +LI II +R+ +L +I + + ++Y
Sbjct: 68 ILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMY------- 120
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
LE+ I D SGD+++L++AL
Sbjct: 121 ------------KTDLEKDIISDTSGDFRKLMVALA 144
Score = 52.6 bits (126), Expect = 1e-09
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A ++ A+ G D+ T++ I+ RS DI + +
Sbjct: 8 ALNIETAIKTKGVDEVTIVNIL-------------------TNRSNAQRQDIAFAYQRRT 48
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
K L +K SG + ++L L+
Sbjct: 49 KKELASALKSALSGHLETVILGLL 72
Score = 39.1 bits (91), Expect = 7e-05
Identities = 20/85 (23%), Positives = 27/85 (31%), Gaps = 20/85 (23%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
AR L DA GTD I I+ RS L + +
Sbjct: 164 ARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYS------------------ 205
Query: 77 YGKTLEEYIKDDCSGDYKRLLLALV 101
+ E I+ + GD + L LV
Sbjct: 206 -PYDMLESIRKEVKGDLENAFLNLV 229
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid
binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Length = 327
Score = 90.4 bits (224), Expect = 2e-23
Identities = 46/98 (46%), Positives = 54/98 (55%), Gaps = 19/98 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
VV+C ++ SY A RL AM G GT D TLIR IV+RSEIDL IK +F K+Y
Sbjct: 246 TVVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMY------ 299
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
GKTL I +D SGDYK LL+LV
Sbjct: 300 -------------GKTLSSMIMEDTSGDYKNALLSLVG 324
Score = 61.9 bits (150), Expect = 5e-13
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V + Y A+ L DAM G+GT + +I I+ +R++ L +I + + + Y
Sbjct: 87 IVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDY------- 139
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
G +LEE I+ D SG +R+L+ L+
Sbjct: 140 ------------GSSLEEDIQADTSGYLERILVCLL 163
Score = 51.5 bits (123), Expect = 2e-09
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L AM GIGT+++ +I ++ RS I ++F +
Sbjct: 27 AETLYKAMKGIGTNEQAIIDVL-------------------TKRSNTQRQQIAKSFKAQF 67
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L E +K + SG ++RL++AL+
Sbjct: 68 GKDLTETLKSELSGKFERLIVALM 91
Score = 40.0 bits (93), Expect = 4e-05
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 20/85 (23%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
A+ L A GTD+ I I+ TRS L + + + K+
Sbjct: 183 AQDLYAAGEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIA------------------ 224
Query: 77 YGKTLEEYIKDDCSGDYKRLLLALV 101
K++E+ IK + G + +L +V
Sbjct: 225 -NKSIEDSIKSETHGSLEEAMLTVV 248
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal
binding protein, calcium, calcium/phospholipid-binding;
1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A
1i4a_A 1aow_A
Length = 322
Score = 90.4 bits (224), Expect = 2e-23
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+V+C+++K +Y A RL +M G+GTDD TLIR++V+R+EID+ DI+ NF +LY
Sbjct: 241 AIVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLY------ 294
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
GK+L +IK D SGDY+++LL L
Sbjct: 295 -------------GKSLYSFIKGDTSGDYRKVLLILC 318
Score = 63.8 bits (155), Expect = 1e-13
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ + Y + L+ AM G GTD+ LI I+ +R+ +
Sbjct: 83 ILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEIL-------------------ASRNPEE 123
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
+ I Q + + YG++LEE I D S ++R+L++L A
Sbjct: 124 IRRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTA 160
Score = 51.1 bits (122), Expect = 3e-09
Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L+ AM G+GTD+ +I ++ R+ +I+ +
Sbjct: 23 AQVLRKAMKGLGTDEDAIIGVL-------------------ACRNTAQRQEIRTAYKSTI 63
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L E +K + S ++++++L ++
Sbjct: 64 GRDLLEDLKSELSSNFEQVILGMM 87
Score = 39.2 bits (91), Expect = 7e-05
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 20/85 (23%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
A+ L +A GTD+ + I+ +R+ L + + ++
Sbjct: 178 AQDLYEAGEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRIS------------------ 219
Query: 77 YGKTLEEYIKDDCSGDYKRLLLALV 101
K +E+ IK + SG ++ LLA+V
Sbjct: 220 -QKDIEQSIKSETSGSFEDALLAIV 243
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form,
FULL-length protein comprising protein core and
N-terminal domain, metal; 1.80A {Sus scrofa} SCOP:
a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Length = 346
Score = 90.4 bits (224), Expect = 3e-23
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
VV+C K + A +L AM GIGT KTLIRI+V+RSEID+ DIK + KLY
Sbjct: 266 VVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLY------ 319
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
G +L + I D+ GDY+++L+AL
Sbjct: 320 -------------GISLCQAILDETKGDYEKILVALC 343
Score = 60.8 bits (147), Expect = 1e-12
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+ +K + + A L+ AM G+GTD+ TL I+ +R+ +
Sbjct: 108 ALALLKTPAQFDADELRAAMKGLGTDEDTLNEIL-------------------ASRTNRE 148
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ +I + + + + L + I D SGDY++ LL+L
Sbjct: 149 IREINRVYKEELKRDLAKDITSDTSGDYQKALLSLA 184
Score = 50.4 bits (120), Expect = 6e-09
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
L A+ G D+ T+I I+ R+ IK +L+
Sbjct: 48 VEALHKAITVKGVDEATIIEIL-------------------TKRTNAQRQQIKAAYLQEK 88
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L+E +K +G + + LAL+
Sbjct: 89 GKPLDEALKKALTGHLEEVALALL 112
Score = 41.9 bits (98), Expect = 6e-06
Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 20/85 (23%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
AR L +A GTD I I+ TRS L + Q + K
Sbjct: 203 ARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYS------------------ 244
Query: 77 YGKTLEEYIKDDCSGDYKRLLLALV 101
+ + + + GD + L +V
Sbjct: 245 -KHDMNKVLDLELKGDIENCLTVVV 268
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent
hexamerization switch E76, low calcium form; 1.93A
{Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Length = 315
Score = 89.6 bits (222), Expect = 3e-23
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+V+ V+++ +Y A RL AM G+GT DKTLIRI+V+RSEIDL +IK+ F +Y
Sbjct: 236 AIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMY------ 289
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
GK+L E+I DDCSGDYK LLL +
Sbjct: 290 -------------GKSLYEFIADDCSGDYKDLLLQIT 313
Score = 62.3 bits (151), Expect = 4e-13
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+ ++ +LA +L AM G+GTD LI I+ T+S
Sbjct: 78 ALALLRKPDEFLAEQLHAAMKGLGTDKNALIDIL-------------------CTQSNAQ 118
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ IK F LY + LE+ I + SG+++RLL++++
Sbjct: 119 IHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSML 154
Score = 50.3 bits (120), Expect = 8e-09
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM GIGTD+K++ I+ TRS IK ++ L+
Sbjct: 18 AETLRKAMKGIGTDEKSITHIL-------------------ATRSNAQRQQIKTDYTTLF 58
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK LE+ +K + SG+Y+ LAL+
Sbjct: 59 GKHLEDELKSELSGNYEAAALALL 82
Score = 37.2 bits (86), Expect = 3e-04
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 20/85 (23%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
A + A G IGTD+ ++ TRS L I + K+
Sbjct: 173 AAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKIS------------------ 214
Query: 77 YGKTLEEYIKDDCSGDYKRLLLALV 101
KT+ + I+++ SGD K LLA+V
Sbjct: 215 -NKTILQAIENEFSGDIKNGLLAIV 238
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A
{Giardia intestinalis} PDB: 2iic_A
Length = 310
Score = 80.3 bits (198), Expect = 9e-20
Identities = 8/94 (8%), Positives = 19/94 (20%), Gaps = 19/94 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+ +A A+ D +T D
Sbjct: 225 AHYYNLAPARAVAYAFHSAVETQNDDMAYEQAARITG-------------------LFHD 265
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLA 99
L +G ++ + S + ++
Sbjct: 266 LHKFAWVHYACWGVMRDDILSRFQSKEANKVNFR 299
Score = 47.1 bits (112), Expect = 1e-07
Identities = 10/99 (10%), Positives = 25/99 (25%), Gaps = 22/99 (22%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+ S +K AM D + + +++ + + + Q + +
Sbjct: 69 MALGWDCNISARVNVIKKAMKN-VNDFRAIHDVVLIATPDERLKLAQAYKEKT------- 120
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDC--SGDYKRLLLALVA 102
G L + D + L +
Sbjct: 121 ------------GNDLLQDFVDQIPLTSAASYLCHLAIR 147
Score = 44.5 bits (105), Expect = 9e-07
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 20/85 (23%)
Query: 18 ARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
A LK + D + ++R+I+T + + +I F L
Sbjct: 160 AEVLKHNLIDADEPDHEAVVRLIITSTADEYKEINHRFEVLT------------------ 201
Query: 77 YGKTLEEYIKDDCSGDYKRLLLALV 101
GK+++E I+ + L +
Sbjct: 202 -GKSVQEAIETRYADKENARGLCIA 225
Score = 39.1 bits (91), Expect = 7e-05
Identities = 10/85 (11%), Positives = 25/85 (29%), Gaps = 22/85 (25%)
Query: 17 LARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKL 76
+K + +++ L+ S + R E ++ F
Sbjct: 9 AIPEVKAILEA--KNEEELVTFTSRWSAEE--------------RKE-----LRTQFQDT 47
Query: 77 YGKTLEEYIKDDC-SGDYKRLLLAL 100
G ++K +G Y+ ++
Sbjct: 48 TGLEFIAFLKKCIKNGPYEDVMALG 72
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding
protein, membrane-binding protein, binding protein;
1.90A {Giardia intestinalis} PDB: 4evh_A
Length = 295
Score = 57.9 bits (140), Expect = 1e-11
Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 20/95 (21%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ D+ A+ ++DA++G D ++ + D + + +++
Sbjct: 67 LMDLFSDRHEVRAQHIRDALSG-RNDHMAFFDTVILCTPEDWHETVAAYTRMF------- 118
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
K L E D LL
Sbjct: 119 ------------KKPLVEDFMKDVGRKEDWCLLME 141
Score = 57.1 bits (138), Expect = 3e-11
Identities = 13/95 (13%), Positives = 22/95 (23%), Gaps = 23/95 (24%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+ A + A G + + RI + L K
Sbjct: 220 AHFALLGMHRLAAYLINCACNDKGDEK-RMRRITGMMVDKCL-GAKH------------- 264
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLAL 100
K+YG + I+ +L L
Sbjct: 265 -------AYKIYGD-MGTDIERCFDKRMAPILRTL 291
Score = 47.1 bits (112), Expect = 9e-08
Identities = 13/84 (15%), Positives = 21/84 (25%), Gaps = 21/84 (25%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+RL A + LI T + I + F
Sbjct: 159 AQRLDQA--FDQKNTAYLIDFFGTVPSAEYRPIAEAFKAQN------------------- 197
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK++E+ I +
Sbjct: 198 GKSIEQAIATIYTKTDYYTFYCAH 221
Score = 38.3 bits (89), Expect = 1e-04
Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 21/87 (24%)
Query: 15 SYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFL 74
+ +A LK A+ D+ + I S R + I + ++
Sbjct: 5 TDIANELKQAIDA--KDEVQIAFIASEYSAES--------------REK-----IAKAYV 43
Query: 75 KLYGKTLEEYIKDDCSGDYKRLLLALV 101
YGK L + IK G + LL +
Sbjct: 44 ASYGKELPDDIKKALKGGSEESLLMDL 70
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.8 bits (63), Expect = 0.24
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 11/35 (31%)
Query: 50 IK--QNFLKLYVTRSEIDLGDIKQNFLKLYGKTLE 82
+K Q LKLY S L IK T+E
Sbjct: 22 LKKLQASLKLYADDSAPALA-IK--------ATME 47
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 28.7 bits (63), Expect = 0.29
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 16/75 (21%)
Query: 37 RIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNF-----LKLYGKTLEEYIKD---- 87
+I++T + D T + I L L K L+ +D
Sbjct: 267 KILLTTRFKQVTDFLSA-----ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321
Query: 88 DCSGDYKRLLLALVA 102
+ + L+++A
Sbjct: 322 VLTTN--PRRLSIIA 334
Score = 27.5 bits (60), Expect = 0.95
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 19/89 (21%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+V + ++ +L +K +++ + L + Q F K V+R +
Sbjct: 82 FVEEVLRINYKFLMSPIKTE-----QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ- 135
Query: 65 DLGDIKQNFLKL-------------YGKT 80
++Q L+L GKT
Sbjct: 136 PYLKLRQALLELRPAKNVLIDGVLGSGKT 164
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 27.7 bits (61), Expect = 0.82
Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 9/52 (17%)
Query: 41 TRS-EIDLGDIKQNFL---KLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDD 88
TR + G ++ L + S++ ++ F K+ + E + DD
Sbjct: 6 TRPLTLSHGSLEHVLLVPTASFFIASQL-----QEQFNKILPEPTEGFAADD 52
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding
motif, ATP- binding, nucleotide-binding, transferase;
HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB:
3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Length = 260
Score = 24.8 bits (54), Expect = 6.0
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 47 LGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEY 84
+ ++++ FLK E+D + + F L LE +
Sbjct: 219 VVELRKEFLKKIKKMEEVDADRVLKEFKDLLNSYLEHH 256
>3unf_N Proteasome subunit beta type-9; antigen presentation, drug
development, protein degradation, hydrolase-hydrolase
inhibitor complex; HET: 04C; 2.90A {Mus musculus} PDB:
3unh_N
Length = 199
Score = 24.1 bits (53), Expect = 8.9
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 2 IGSYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDL 47
G+ VV V DK S L +R+ A++G D + + + +++L
Sbjct: 22 AGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA--AYQLEL 65
>1j2q_H Proteasome beta subunit; ubiquitin, CP, hydrolase; HET: CIB;
2.83A {Archaeoglobus fulgidus} SCOP: d.153.1.4
Length = 202
Score = 24.1 bits (53), Expect = 9.1
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 3 GSYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDL 47
G+++ K +A R+ AG D + L RII + E +L
Sbjct: 23 GNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARII--KIEANL 65
>3ljw_A Protein polybromo-1; alpha helix, alternative splicing,
bromodomain, chromatin RE DNA-binding, nucleus,
phosphoprotein, transcription; 1.50A {Homo sapiens}
PDB: 2ktb_B* 3hmf_A
Length = 120
Score = 23.8 bits (52), Expect = 9.1
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 64 IDLGDIKQNFLKLYGKTLEEYIKD 87
IDL I Q K++ KD
Sbjct: 55 IDLKTIAQRIQNGSYKSIHAMAKD 78
>3nzj_K Proteasome component PRE2; ubiquitin, protein degradation,
N-terminal nucleophilic HYDR 19S regulatory particle;
HET: TY5 TRO MES; 2.40A {Saccharomyces cerevisiae} PDB:
3nzw_K* 3nzx_K*
Length = 287
Score = 24.3 bits (53), Expect = 9.7
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 3 GSYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDL 47
G++V K + L MAG D + + S+ L
Sbjct: 98 GNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWL--GSQCRL 140
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.141 0.391
Gapped
Lambda K H
0.267 0.0639 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,580,502
Number of extensions: 84635
Number of successful extensions: 355
Number of sequences better than 10.0: 1
Number of HSP's gapped: 301
Number of HSP's successfully gapped: 87
Length of query: 102
Length of database: 6,701,793
Length adjustment: 67
Effective length of query: 35
Effective length of database: 4,831,086
Effective search space: 169088010
Effective search space used: 169088010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.6 bits)