RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4859
(102 letters)
>d1hm6a_ a.65.1.1 (A:) Annexin I {Pig (Sus scrofa) [TaxId: 9823]}
Length = 343
Score = 101 bits (253), Expect = 6e-28
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
VV+C K + A +L AM GIGT KTLIRI+V+ RSEI
Sbjct: 265 VVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVS-------------------RSEI 305
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
D+ DIK + KLYG +L + I D+ GDY+++L+AL
Sbjct: 306 DMNDIKACYQKLYGISLCQAILDETKGDYEKILVALC 342
Score = 53.5 bits (128), Expect = 2e-10
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
L A+ G D+ T+I I+ R+ IK +L+
Sbjct: 47 VEALHKAITVKGVDEATIIEIL-------------------TKRTNAQRQQIKAAYLQEK 87
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L+E +K +G + + LAL+
Sbjct: 88 GKPLDEALKKALTGHLEEVALALL 111
Score = 48.8 bits (116), Expect = 8e-09
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+ +K + + A L+ AM G+GTD+ TL I+ +R+ +
Sbjct: 107 ALALLKTPAQFDADELRAAMKGLGTDEDTLNEIL-------------------ASRTNRE 147
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ +I + + + + L + I D SGDY++ LL+L
Sbjct: 148 IREINRVYKEELKRDLAKDITSDTSGDYQKALLSLA 183
Score = 34.6 bits (79), Expect = 9e-04
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 54 FLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
F+ + TRS L + Q + K + + + + GD + L +V
Sbjct: 220 FITILTTRSYPHLRRVFQKYSKYSKHDMNKVLDLELKGDIENCLTVVVK 268
>d1n00a_ a.65.1.1 (A:) Annexin GH1 {Cotton (Gossypium hirsutum)
[TaxId: 3635]}
Length = 318
Score = 97.8 bits (243), Expect = 1e-26
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
V+C+ Y + L+ A+ GTD+ L R++ T R+E+
Sbjct: 236 STVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCT-------------------RAEV 276
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
DL I + + L I D GDY++LLL L
Sbjct: 277 DLKVIADEYQRRNSVPLTRAIVKDTHGDYEKLLLVLA 313
Score = 54.6 bits (131), Expect = 8e-11
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 19/81 (23%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
+L+ A +G GT++ +I I+ R+ I++ + + Y
Sbjct: 19 CEQLRKAFSGWGTNEGLIIDIL-------------------GHRNAEQRNLIRKTYAETY 59
Query: 78 GKTLEEYIKDDCSGDYKRLLL 98
G+ L + + + S D++RL+L
Sbjct: 60 GEDLLKALDKELSNDFERLVL 80
Score = 48.1 bits (114), Expect = 2e-08
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
V+ D + A +A + ++ L+ I TRS L +Q + Y
Sbjct: 79 VLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHARY------- 131
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
K+LEE + +GD+ +LLL LV
Sbjct: 132 ------------KKSLEEDVAHHTTGDFHKLLLPLV 155
Score = 31.9 bits (72), Expect = 0.007
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 19/85 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L + ++ D +IR++ TRS+ + ++ Y
Sbjct: 174 AKLLHEKISNKAYSDDDVIRVLATRSKAQINATLNHYKNEY------------------- 214
Query: 78 GKTLEEYIKDDCSGDYKRLLLALVA 102
G + + +K D ++ LL + V
Sbjct: 215 GNDINKDLKADPKDEFLALLRSTVK 239
>d1avca1 a.65.1.1 (A:10-350) Annexin VI {Cow (Bos taurus) [TaxId:
9913]}
Length = 341
Score = 97.8 bits (243), Expect = 1e-26
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 1 MIGSYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVT 60
+ VV+C++ + Y A RL AM G+GT D TLIRI+V+
Sbjct: 231 KLMLAVVKCIRSTAEYFAERLFKAMKGLGTRDNTLIRIMVS------------------- 271
Query: 61 RSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
RSE+D+ DI++ F Y K+L IK+D SG+YK+ LL L
Sbjct: 272 RSELDMLDIREIFRTKYEKSLYSMIKNDTSGEYKKTLLKLC 312
Score = 55.0 bits (132), Expect = 5e-11
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L +AM G G+D + +I +I +RS +I QN+ LY
Sbjct: 17 AETLYNAMKGFGSDKEAIINLI-------------------TSRSNKQRQEICQNYKSLY 57
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L +K + +G ++RL++ L+
Sbjct: 58 GKDLIADLKYELTGKFERLIVGLM 81
Score = 50.8 bits (121), Expect = 2e-09
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V ++ + A+ +KDA++GIGTD+K LI I+ +R+
Sbjct: 77 IVGLMRPPAYADAKEIKDAISGIGTDEKCLIEIL-------------------ASRTNEQ 117
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ + + Y + LE I D SG ++++L+ L+
Sbjct: 118 IHQLVAAYKDAYERDLEADITGDTSGHFRKMLVVLL 153
Score = 32.7 bits (74), Expect = 0.004
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 32 DKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSG 91
+ ++ + E+ G + F+ + RS+ L + +LK GK +E I+ + SG
Sbjct: 168 VQQDVQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSG 227
Query: 92 DYKRLLLALVA 102
D+++L+LA+V
Sbjct: 228 DFEKLMLAVVK 238
>d1axna_ a.65.1.1 (A:) Annexin III {Human (Homo sapiens) [TaxId:
9606]}
Length = 323
Score = 97.4 bits (242), Expect = 2e-26
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+V CV++ ++LA RL A+ GIGTD+ TL RI+V+ RSEI
Sbjct: 242 AIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVS-------------------RSEI 282
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
DL DI+ F K YG +L IK D SGDY+ LL +
Sbjct: 283 DLLDIRTEFKKHYGYSLYSAIKSDTSGDYEITLLKIC 319
Score = 56.1 bits (135), Expect = 2e-11
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A ++ A+ GIGTD+K LI I+ RS I + + Y
Sbjct: 24 AEAIQKAIRGIGTDEKMLISIL-------------------TERSNAQRQLIVKEYQAAY 64
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L++ +K D SG ++ L++ALV
Sbjct: 65 GKELKDDLKGDLSGHFEHLMVALV 88
Score = 53.8 bits (129), Expect = 1e-10
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V V + + A++LK +M G GT++ LI I+ TR+ + DI Q + +Y
Sbjct: 84 MVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVY------- 136
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
K+L + I + SGD+++ LL L
Sbjct: 137 ------------KKSLGDDISSETSGDFRKALLTLAD 161
Score = 34.9 bits (80), Expect = 6e-04
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 52 QNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
F ++ RS L + + K + + IK + SG ++ LLLA+V
Sbjct: 195 DKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLLLAIVN 245
>d1avca2 a.65.1.1 (A:351-671) Annexin VI {Cow (Bos taurus) [TaxId:
9913]}
Length = 321
Score = 96.6 bits (240), Expect = 3e-26
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+VQ VK+K + A +L +M G GT++KTL RI+V+ RSEI
Sbjct: 242 AIVQSVKNKPLFFADKLYKSMKGAGTEEKTLTRIMVS-------------------RSEI 282
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
DL +I++ F++ Y K+L + I+ D SG + + LLA+
Sbjct: 283 DLLNIRREFIEKYDKSLHQAIEGDTSGHFLKALLAIC 319
Score = 53.5 bits (128), Expect = 2e-10
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L+ AM G+GTD+ T+I II RS I+Q F +
Sbjct: 19 AKALRKAMKGLGTDEDTIIDII-------------------THRSNAQRQQIRQTFKSHF 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L +K + SGD RL+L L+
Sbjct: 60 GRDLMADLKSELSGDLARLILGLM 83
Score = 45.0 bits (106), Expect = 2e-07
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ + + Y A++LK AM G GTD+K LI I+ TR+ +
Sbjct: 79 ILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEIL-------------------ATRTNAE 119
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ I + + + Y KTLE+ + D SG +KR+L++L
Sbjct: 120 IQAINKAYKEDYHKTLEDALSSDTSGHFKRILISLA 155
Score = 35.8 bits (82), Expect = 3e-04
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 44 EIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
D ++ F+ + TRS DL + Q F+K+ +E IK + SGD + + +A+V
Sbjct: 187 SGDKSSLETRFMMILCTRSYPDLRRVFQEFVKMTNYDVEHTIKKEMSGDVRDVFVAIVQ 245
>d1dm5a_ a.65.1.1 (A:) Annexin XII {Hydra vulgaris [TaxId: 6087]}
Length = 315
Score = 96.2 bits (239), Expect = 5e-26
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+V+ V+++ +Y A RL AM G+GT DKTLIRI+V+ RSEI
Sbjct: 236 AIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVS-------------------RSEI 276
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
DL +IK+ F +YGK+L E+I DDCSGDYK LLL +
Sbjct: 277 DLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQIT 313
Score = 55.8 bits (134), Expect = 3e-11
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM GIGTD+K++ I+ TRS IK ++ L+
Sbjct: 18 AETLRKAMKGIGTDEKSITHIL-------------------ATRSNAQRQQIKTDYTTLF 58
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK LE+ +K + SG+Y+ LAL+
Sbjct: 59 GKHLEDELKSELSGNYEAAALALL 82
Score = 48.1 bits (114), Expect = 2e-08
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 19/98 (19%)
Query: 4 SYVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSE 63
+ + ++ +LA +L AM G+GTD LI I+ T+S + IK F LY
Sbjct: 76 AAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLY----- 130
Query: 64 IDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
+ LE+ I + SG+++RLL++++
Sbjct: 131 --------------KEDLEKEIISETSGNFQRLLVSML 154
Score = 33.1 bits (75), Expect = 0.003
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 59 VTRSEIDLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
TRS L I + K+ KT+ + I+++ SGD K LLA+V
Sbjct: 196 ATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVK 239
>d2ie7a1 a.65.1.1 (A:2-319) Annexin V {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 318
Score = 95.0 bits (236), Expect = 1e-25
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
VV+ ++ +YLA L AM G GTDD TLIR+IV+ RSEI
Sbjct: 236 AVVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVS-------------------RSEI 276
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
DL +I++ F K + +L IK D SGDYK+ LL L
Sbjct: 277 DLFNIRKEFRKNFATSLYSMIKGDTSGDYKKALLLLC 313
Score = 55.0 bits (132), Expect = 5e-11
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 19/82 (23%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A L+ AM G+GTD+ +++ ++ RS I + F L+
Sbjct: 18 AEVLRKAMKGLGTDEDSILNLL-------------------TARSNAQRQQIAEEFKTLF 58
Query: 78 GKTLEEYIKDDCSGDYKRLLLA 99
G+ L +K + +G +++L++A
Sbjct: 59 GRDLVNDMKSELTGKFEKLIVA 80
Score = 52.3 bits (125), Expect = 5e-10
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 19/94 (20%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
+V +K Y A LK A+ G GTD+K L II +R+ +
Sbjct: 78 IVALMKPSRLYDAYELKHALKGAGTDEKVLTEII-------------------ASRTPEE 118
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLA 99
L IKQ + + YG LE+ + D SG Y+R+L+
Sbjct: 119 LRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVV 152
Score = 34.9 bits (80), Expect = 6e-04
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 25 MAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEY 84
A + D + L + + D ++ F+ + TRS L + ++ + G +EE
Sbjct: 166 DAQVELDAQALFQAGELKWGTD----EEKFITILGTRSVSHLRRVFDKYMTISGFQIEET 221
Query: 85 IKDDCSGDYKRLLLALV 101
I + SG+ + LLLA+V
Sbjct: 222 IDRETSGNLENLLLAVV 238
>d1w7ba_ a.65.1.1 (A:) Annexin II {Human (Homo sapiens) [TaxId:
9606]}
Length = 319
Score = 93.1 bits (231), Expect = 6e-25
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+VQC+++K Y A RL D+M G GT DK LIRI+V+RSE+D+ I+ F + Y
Sbjct: 238 NLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKY------ 291
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
GK+L YI+ D GDY++ LL L
Sbjct: 292 -------------GKSLYYYIQQDTKGDYQKALLYLC 315
Score = 53.5 bits (128), Expect = 2e-10
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A ++ A+ G D+ T++ I+ RS DI + +
Sbjct: 19 ALNIETAIKTKGVDEVTIVNIL-------------------TNRSNEQRQDIAFAYQRRT 59
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
K L +K SG + ++L L+
Sbjct: 60 KKELASALKSALSGHLETVILGLL 83
Score = 48.8 bits (116), Expect = 8e-09
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ +K + Y A LK +M G+GTD+ +LI II +R+ +
Sbjct: 79 ILGLLKTPAQYDASELKASMKGLGTDEDSLIEII-------------------CSRTNQE 119
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
L +I + + ++Y LE+ I D SGD+++L++AL
Sbjct: 120 LQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAK 156
Score = 32.7 bits (74), Expect = 0.004
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Query: 28 IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLYGKTLEEYIKD 87
I D + L V R D ++ + RS L + + + E I+
Sbjct: 171 IDQDARDLYDAGVKRKGTD----VPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRK 226
Query: 88 DCSGDYKRLLLALV 101
+ GD + L LV
Sbjct: 227 EVKGDLENAFLNLV 240
>d1i4aa_ a.65.1.1 (A:) Annexin IV {Cow (Bos taurus) [TaxId: 9913]}
Length = 309
Score = 89.7 bits (222), Expect = 1e-23
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 19/97 (19%)
Query: 5 YVVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEI 64
+V+C+++KS+Y A RL +M G+GTDD TLIR++V+R+EID+ DI+ NF +LY
Sbjct: 228 AIVKCMRNKSAYFAERLYKSMKGLGTDDDTLIRVMVSRAEIDMLDIRANFKRLY------ 281
Query: 65 DLGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
GK+L +IK D SGDY+++LL L
Sbjct: 282 -------------GKSLYSFIKGDTSGDYRKVLLILC 305
Score = 54.6 bits (131), Expect = 7e-11
Identities = 18/84 (21%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
A+ L+ AM G+GTD+ +I ++ RS +I+ +
Sbjct: 10 AQTLRKAMKGLGTDEDAIINVL-------------------AYRSTAQRQEIRTAYKTTI 50
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
G+ L + +K + SG++++++L ++
Sbjct: 51 GRDLMDDLKSELSGNFEQVILGMM 74
Score = 47.3 bits (112), Expect = 3e-08
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 6 VVQCVKDKSSYLARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEID 65
++ + Y + L+ AM G GTD+ LI I+ +R+ ++ I Q + Y
Sbjct: 70 ILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRINQTYQLQY------- 122
Query: 66 LGDIKQNFLKLYGKTLEEYIKDDCSGDYKRLLLALVA 102
G++LE+ I+ D S ++R+L++L A
Sbjct: 123 ------------GRSLEDDIRSDTSFMFQRVLVSLSA 147
Score = 34.2 bits (78), Expect = 0.001
Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 20/91 (21%)
Query: 12 DKSSYLARRLKDAMAG-IGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIK 70
A+ L +A GTD+ + ++ +R+ L + + ++
Sbjct: 159 ALMRQDAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIA------------ 206
Query: 71 QNFLKLYGKTLEEYIKDDCSGDYKRLLLALV 101
K +E+ IK + SG ++ LLA+V
Sbjct: 207 -------QKDIEQSIKSETSGSFEDALLAIV 230
>d1bo9a_ a.65.1.1 (A:) Annexin I {Human (Homo sapiens) [TaxId:
9606]}
Length = 73
Score = 74.0 bits (182), Expect = 9e-20
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 19/84 (22%)
Query: 18 ARRLKDAMAGIGTDDKTLIRIIVTRSEIDLGDIKQNFLKLYVTRSEIDLGDIKQNFLKLY 77
L A+ G D+ T+I I+ R+ IK +L+
Sbjct: 8 VAALHKAIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQET------------------- 48
Query: 78 GKTLEEYIKDDCSGDYKRLLLALV 101
GK L+E +K +G + ++LAL+
Sbjct: 49 GKPLDETLKKALTGHLEEVVLALL 72
>d1u5la_ d.6.1.1 (A:) Prion protein domain {Red-eared slider turtle
(Trachemys scripta) [TaxId: 34903]}
Length = 107
Score = 24.7 bits (54), Expect = 1.7
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 70 KQNFLKLYGKTLEEYIKDDCSGDYKRLLLA 99
QN ++ + +++ I++ C Y++ LA
Sbjct: 77 NQNVTQVEVRVMKQVIQEMCMQQYQQYQLA 106
>d1i17a_ d.6.1.1 (A:) Prion-like protein Doppel {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 107
Score = 23.2 bits (50), Expect = 5.2
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 70 KQNFLKLYGKTLEEYIKDDCSGDYKRLLLA 99
++ KL+ + L IK+ CS + L
Sbjct: 74 EKQDSKLHQRVLWRLIKEICSAKHCDFWLE 103
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.141 0.391
Gapped
Lambda K H
0.267 0.0590 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 378,815
Number of extensions: 15714
Number of successful extensions: 110
Number of sequences better than 10.0: 1
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 47
Length of query: 102
Length of database: 2,407,596
Length adjustment: 63
Effective length of query: 39
Effective length of database: 1,542,606
Effective search space: 60161634
Effective search space used: 60161634
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.2 bits)