Query psy4866
Match_columns 537
No_of_seqs 497 out of 2491
Neff 11.0
Searched_HMMs 46136
Date Fri Aug 16 19:39:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4866.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4866hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569|consensus 100.0 1.4E-44 2.9E-49 346.2 44.6 442 61-506 6-472 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 3E-43 6.4E-48 359.4 43.3 415 62-495 163-740 (742)
3 PRK10077 xylE D-xylose transpo 100.0 3E-41 6.5E-46 341.1 45.3 428 63-506 9-475 (479)
4 KOG0254|consensus 100.0 1.8E-41 4E-46 342.4 43.1 447 62-508 41-503 (513)
5 TIGR00887 2A0109 phosphate:H+ 100.0 3.2E-42 6.9E-47 348.2 37.1 427 62-500 12-500 (502)
6 TIGR00879 SP MFS transporter, 100.0 1.4E-39 3E-44 329.8 38.6 430 62-496 24-478 (481)
7 TIGR00898 2A0119 cation transp 100.0 3.5E-39 7.6E-44 327.8 32.6 388 87-497 110-503 (505)
8 PRK10642 proline/glycine betai 100.0 1.7E-37 3.6E-42 312.6 41.1 391 67-495 17-436 (490)
9 COG2271 UhpC Sugar phosphate p 100.0 9.5E-38 2.1E-42 285.1 26.5 398 62-489 25-435 (448)
10 COG2814 AraJ Arabinose efflux 100.0 5.6E-36 1.2E-40 278.3 35.2 368 65-488 12-386 (394)
11 PF00083 Sugar_tr: Sugar (and 100.0 5.3E-44 1.1E-48 358.2 -22.0 425 70-502 4-450 (451)
12 TIGR02332 HpaX 4-hydroxyphenyl 100.0 6.2E-36 1.3E-40 294.3 30.8 385 64-476 6-409 (412)
13 PRK11663 regulatory protein Uh 100.0 2.3E-35 5E-40 292.8 34.3 392 65-492 22-428 (434)
14 KOG0253|consensus 100.0 2.2E-35 4.7E-40 262.3 30.2 413 62-495 74-526 (528)
15 PRK12307 putative sialic acid 100.0 2.8E-35 6E-40 293.0 34.6 369 63-469 15-389 (426)
16 PRK09556 uhpT sugar phosphate 100.0 2.2E-35 4.7E-40 295.9 31.2 390 64-485 27-446 (467)
17 PRK11551 putative 3-hydroxyphe 100.0 8.5E-35 1.8E-39 287.6 34.9 374 63-484 12-392 (406)
18 PRK03545 putative arabinose tr 100.0 1.8E-34 3.9E-39 283.1 35.9 367 64-488 7-380 (390)
19 PRK03893 putative sialic acid 100.0 1.6E-34 3.4E-39 293.4 36.0 403 63-479 17-444 (496)
20 TIGR00891 2A0112 putative sial 100.0 2.1E-34 4.5E-39 285.2 35.9 382 62-470 8-398 (405)
21 PRK10406 alpha-ketoglutarate t 100.0 3.3E-34 7.2E-39 284.5 37.3 371 64-484 20-420 (432)
22 KOG0252|consensus 100.0 3.2E-36 6.9E-41 276.2 18.5 429 57-502 32-511 (538)
23 PRK09705 cynX putative cyanate 100.0 6.5E-34 1.4E-38 278.6 35.4 372 64-495 8-388 (393)
24 PRK09952 shikimate transporter 100.0 1.4E-33 2.9E-38 280.1 38.0 380 65-490 21-434 (438)
25 TIGR00903 2A0129 major facilit 100.0 2.8E-34 6E-39 276.4 30.8 347 81-484 6-361 (368)
26 PRK15075 citrate-proton sympor 100.0 9.6E-33 2.1E-37 274.3 36.7 354 67-467 16-398 (434)
27 PRK11273 glpT sn-glycerol-3-ph 100.0 2.1E-32 4.6E-37 273.1 36.6 387 65-488 28-435 (452)
28 PLN00028 nitrate transmembrane 100.0 3.7E-33 8E-38 279.3 30.8 359 80-486 50-431 (476)
29 KOG0255|consensus 100.0 2.1E-32 4.6E-37 278.4 35.7 415 63-501 82-505 (521)
30 PRK14995 methyl viologen resis 100.0 1.9E-32 4.1E-37 276.1 34.8 381 63-463 3-413 (495)
31 PRK15034 nitrate/nitrite trans 100.0 4.7E-32 1E-36 261.8 35.2 359 81-491 49-457 (462)
32 TIGR00890 2A0111 Oxalate/Forma 100.0 4.2E-33 9.1E-38 273.1 27.3 361 71-481 9-375 (377)
33 PRK05122 major facilitator sup 100.0 2.9E-32 6.2E-37 268.7 33.3 356 71-487 20-388 (399)
34 PRK10213 nepI ribonucleoside t 100.0 1.9E-31 4E-36 261.0 37.2 359 67-483 21-386 (394)
35 TIGR00893 2A0114 d-galactonate 100.0 1.6E-32 3.5E-37 271.0 27.9 383 77-485 5-396 (399)
36 PRK12382 putative transporter; 100.0 1.8E-31 3.9E-36 262.3 35.1 352 75-487 24-388 (392)
37 PRK10091 MFS transport protein 100.0 1.7E-31 3.6E-36 261.0 33.7 362 69-487 6-375 (382)
38 PRK03699 putative transporter; 100.0 1.7E-31 3.6E-36 262.2 33.1 364 67-486 8-378 (394)
39 PRK10489 enterobactin exporter 100.0 1.9E-32 4.1E-37 271.3 25.4 371 77-498 28-409 (417)
40 TIGR00895 2A0115 benzoate tran 100.0 8.5E-32 1.8E-36 265.9 29.6 377 64-460 15-397 (398)
41 PRK15402 multidrug efflux syst 100.0 6.8E-31 1.5E-35 259.4 35.5 376 61-483 8-390 (406)
42 TIGR00712 glpT glycerol-3-phos 100.0 2.5E-31 5.4E-36 264.4 31.4 397 65-492 26-437 (438)
43 TIGR00892 2A0113 monocarboxyla 100.0 4.5E-32 9.8E-37 270.1 25.8 369 83-483 36-416 (455)
44 PRK03633 putative MFS family t 100.0 2.9E-30 6.2E-35 252.4 35.9 353 70-483 10-367 (381)
45 PRK09874 drug efflux system pr 100.0 2.1E-30 4.5E-35 256.7 34.9 362 72-487 20-397 (408)
46 TIGR00894 2A0114euk Na(+)-depe 100.0 3.9E-31 8.5E-36 265.7 26.3 390 63-484 16-446 (465)
47 COG2223 NarK Nitrate/nitrite t 100.0 2.1E-30 4.6E-35 237.8 27.7 356 83-488 31-401 (417)
48 TIGR00900 2A0121 H+ Antiporter 100.0 1.3E-30 2.8E-35 254.3 27.9 347 72-465 5-365 (365)
49 PRK10504 putative transporter; 100.0 8.4E-30 1.8E-34 256.7 32.8 376 71-467 15-419 (471)
50 TIGR00881 2A0104 phosphoglycer 100.0 3.1E-31 6.8E-36 260.0 21.4 368 75-470 4-379 (379)
51 TIGR00711 efflux_EmrB drug res 100.0 5E-30 1.1E-34 259.9 30.7 379 67-464 3-411 (485)
52 KOG1330|consensus 100.0 3.7E-32 8.1E-37 251.0 11.8 366 63-464 30-413 (493)
53 PRK11043 putative transporter; 100.0 3.6E-29 7.9E-34 246.8 33.6 339 78-467 18-361 (401)
54 PRK10133 L-fucose transporter; 100.0 4.4E-29 9.6E-34 246.7 33.6 357 69-479 29-424 (438)
55 TIGR00897 2A0118 polyol permea 100.0 2.4E-29 5.2E-34 247.5 31.5 357 83-485 30-398 (402)
56 TIGR00899 2A0120 sugar efflux 100.0 3.8E-29 8.3E-34 244.8 32.7 356 73-484 4-370 (375)
57 TIGR00710 efflux_Bcr_CflA drug 100.0 3E-29 6.6E-34 246.4 31.6 339 76-462 15-360 (385)
58 PRK15403 multidrug efflux syst 100.0 9.1E-29 2E-33 243.4 34.8 366 67-480 17-389 (413)
59 TIGR00885 fucP L-fucose:H+ sym 100.0 6.4E-29 1.4E-33 243.4 33.0 349 68-473 5-397 (410)
60 cd06174 MFS The Major Facilita 100.0 4.4E-29 9.6E-34 242.1 31.6 338 71-484 4-348 (352)
61 TIGR00883 2A0106 metabolite-pr 100.0 4.7E-29 1E-33 246.0 32.2 355 77-474 4-387 (394)
62 KOG2532|consensus 100.0 1.3E-29 2.9E-34 246.7 27.4 354 98-487 67-446 (466)
63 PF07690 MFS_1: Major Facilita 100.0 4.6E-30 1E-34 249.1 23.9 341 72-454 2-352 (352)
64 PRK11195 lysophospholipid tran 100.0 4.7E-29 1E-33 243.9 30.4 364 73-487 10-379 (393)
65 PRK11646 multidrug resistance 100.0 2E-28 4.4E-33 240.0 32.9 351 78-483 22-383 (400)
66 PRK11010 ampG muropeptide tran 100.0 1.6E-28 3.4E-33 246.2 32.8 381 56-487 5-402 (491)
67 PRK10473 multidrug efflux syst 100.0 1.7E-28 3.7E-33 241.2 32.0 343 75-475 12-361 (392)
68 PRK10054 putative transporter; 100.0 1.1E-28 2.4E-33 241.4 29.1 358 74-484 15-380 (395)
69 KOG2533|consensus 100.0 6E-29 1.3E-33 242.5 26.3 287 65-376 44-354 (495)
70 PRK11102 bicyclomycin/multidru 100.0 6.9E-28 1.5E-32 235.9 30.9 331 80-457 5-343 (377)
71 TIGR00896 CynX cyanate transpo 100.0 1.5E-27 3.2E-32 231.2 30.6 334 76-467 10-352 (355)
72 PRK11652 emrD multidrug resist 100.0 6E-27 1.3E-31 230.4 32.5 334 78-463 20-360 (394)
73 PRK15011 sugar efflux transpor 100.0 1.3E-26 2.7E-31 227.4 34.7 352 75-484 24-387 (393)
74 TIGR00902 2A0127 phenyl propri 100.0 5.2E-27 1.1E-31 229.2 31.4 355 72-483 10-374 (382)
75 PRK09528 lacY galactoside perm 100.0 3.8E-27 8.3E-32 233.5 30.8 366 80-490 24-405 (420)
76 TIGR00889 2A0110 nucleoside tr 100.0 3.1E-27 6.7E-32 232.6 28.6 369 73-493 9-407 (418)
77 TIGR00886 2A0108 nitrite extru 100.0 2.7E-27 5.9E-32 230.8 24.4 336 75-449 10-365 (366)
78 TIGR00882 2A0105 oligosacchari 100.0 3.5E-26 7.7E-31 224.9 31.0 364 75-485 11-392 (396)
79 PRK11128 putative 3-phenylprop 100.0 5.4E-26 1.2E-30 222.2 31.0 350 75-481 13-372 (382)
80 PRK11902 ampG muropeptide tran 100.0 9.1E-26 2E-30 222.2 31.6 361 73-484 6-386 (402)
81 COG0738 FucP Fucose permease [ 100.0 3.2E-25 7E-30 202.2 30.5 357 69-481 16-402 (422)
82 PF06609 TRI12: Fungal trichot 100.0 5.4E-25 1.2E-29 217.1 34.3 377 66-462 44-466 (599)
83 KOG3764|consensus 100.0 4.9E-28 1.1E-32 218.7 11.7 374 66-487 21-453 (464)
84 PTZ00207 hypothetical protein; 100.0 3.5E-25 7.7E-30 220.1 33.3 406 63-492 25-556 (591)
85 KOG2504|consensus 99.9 1.9E-26 4E-31 227.7 22.7 395 65-484 45-472 (509)
86 PRK08633 2-acyl-glycerophospho 99.9 4.3E-25 9.3E-30 246.8 33.0 351 87-483 31-405 (1146)
87 PRK06814 acylglycerophosphoeth 99.9 2.9E-25 6.3E-30 247.0 31.2 346 104-481 52-415 (1140)
88 TIGR00806 rfc RFC reduced fola 99.9 7.8E-25 1.7E-29 207.1 28.0 353 82-456 42-408 (511)
89 PF05977 MFS_3: Transmembrane 99.9 1.8E-24 3.9E-29 214.7 31.5 367 62-484 13-390 (524)
90 COG2807 CynX Cyanate permease 99.9 1.2E-23 2.6E-28 188.9 30.8 362 65-484 11-381 (395)
91 TIGR00924 yjdL_sub1_fam amino 99.9 7.7E-24 1.7E-28 211.3 32.1 405 73-488 17-468 (475)
92 TIGR00792 gph sugar (Glycoside 99.9 1.5E-24 3.2E-29 216.8 27.0 331 88-467 22-384 (437)
93 TIGR00901 2A0125 AmpG-related 99.9 2E-24 4.3E-29 209.5 26.6 329 81-447 3-355 (356)
94 PRK10207 dipeptide/tripeptide 99.9 3.3E-24 7.1E-29 213.9 27.7 400 75-487 23-475 (489)
95 TIGR00805 oat sodium-independe 99.9 7.8E-25 1.7E-29 224.3 21.4 297 69-381 36-415 (633)
96 KOG2615|consensus 99.9 5.9E-24 1.3E-28 191.2 22.8 351 98-480 62-432 (451)
97 TIGR02718 sider_RhtX_FptX side 99.9 8.8E-23 1.9E-27 200.4 32.3 367 69-482 4-385 (390)
98 TIGR01301 GPH_sucrose GPH fami 99.9 3E-22 6.6E-27 195.4 33.0 388 79-493 17-476 (477)
99 PRK09584 tppB putative tripept 99.9 3.8E-22 8.2E-27 200.3 28.3 394 76-486 31-477 (500)
100 PF03825 Nuc_H_symport: Nucleo 99.9 4.9E-21 1.1E-25 184.9 32.3 366 75-491 11-398 (400)
101 PRK10429 melibiose:sodium symp 99.9 4.8E-21 1.1E-25 192.2 25.8 351 74-466 14-396 (473)
102 KOG2563|consensus 99.9 6.1E-20 1.3E-24 170.0 28.0 390 57-490 36-452 (480)
103 KOG4686|consensus 99.9 2.5E-21 5.4E-26 166.8 16.7 374 62-484 40-439 (459)
104 PRK09669 putative symporter Ya 99.9 1.2E-19 2.7E-24 181.0 27.9 329 88-467 32-392 (444)
105 PRK15462 dipeptide/tripeptide 99.9 1.2E-18 2.7E-23 170.9 32.5 373 79-460 22-437 (493)
106 TIGR00788 fbt folate/biopterin 99.9 7.5E-20 1.6E-24 182.2 22.2 380 70-474 30-429 (468)
107 PF01306 LacY_symp: LacY proto 99.9 1.4E-20 3E-25 177.8 15.6 365 79-493 20-405 (412)
108 PF13347 MFS_2: MFS/sugar tran 99.8 7.5E-19 1.6E-23 174.5 25.4 331 88-467 24-388 (428)
109 PRK11462 putative transporter; 99.8 2.6E-18 5.7E-23 171.1 28.7 322 98-467 39-391 (460)
110 PRK09848 glucuronide transport 99.8 2.5E-18 5.4E-23 171.9 26.9 325 90-466 33-391 (448)
111 PF11700 ATG22: Vacuole efflux 99.8 4.5E-17 9.7E-22 160.4 33.1 352 105-490 71-469 (477)
112 COG2211 MelB Na+/melibiose sym 99.8 1E-17 2.2E-22 159.9 26.0 338 82-467 28-400 (467)
113 TIGR01272 gluP glucose/galacto 99.8 3.5E-17 7.5E-22 154.0 25.8 269 152-472 5-299 (310)
114 COG2270 Permeases of the major 99.7 1.6E-15 3.5E-20 140.2 26.5 345 103-491 57-431 (438)
115 KOG2325|consensus 99.7 6E-17 1.3E-21 155.0 17.8 386 70-488 38-475 (488)
116 KOG3626|consensus 99.7 7.3E-16 1.6E-20 153.6 22.4 294 66-377 97-473 (735)
117 COG3104 PTR2 Dipeptide/tripept 99.7 3.8E-15 8.2E-20 141.0 25.1 384 99-486 56-485 (498)
118 PRK10642 proline/glycine betai 99.7 2.8E-16 6E-21 158.7 18.7 177 86-264 270-459 (490)
119 PF03137 OATP: Organic Anion T 99.7 4.4E-18 9.5E-23 170.0 -0.8 382 69-463 6-514 (539)
120 PF03209 PUCC: PUCC protein; 99.6 5.6E-13 1.2E-17 124.1 27.0 318 98-463 9-363 (403)
121 TIGR00880 2_A_01_02 Multidrug 99.5 4.4E-14 9.5E-19 117.0 11.4 133 109-241 3-140 (141)
122 COG2271 UhpC Sugar phosphate p 99.5 2.7E-13 5.9E-18 125.5 13.1 184 296-492 24-210 (448)
123 KOG2816|consensus 99.5 2E-12 4.3E-17 126.1 19.4 352 70-463 26-392 (463)
124 TIGR01299 synapt_SV2 synaptic 99.5 4.1E-13 8.9E-18 138.7 15.2 137 107-243 598-737 (742)
125 TIGR00895 2A0115 benzoate tran 99.5 8.4E-13 1.8E-17 130.3 16.0 177 303-492 19-196 (398)
126 PRK09528 lacY galactoside perm 99.5 6.8E-13 1.5E-17 131.7 13.6 144 98-241 256-405 (420)
127 TIGR00889 2A0110 nucleoside tr 99.5 1.1E-12 2.3E-17 129.6 14.7 140 103-242 250-405 (418)
128 PRK15011 sugar efflux transpor 99.5 3.3E-12 7.2E-17 125.5 18.1 152 87-241 237-392 (393)
129 PF05631 DUF791: Protein of un 99.5 2.9E-11 6.3E-16 110.9 22.5 256 85-378 53-322 (354)
130 PF01770 Folate_carrier: Reduc 99.4 6.6E-11 1.4E-15 111.8 25.3 341 98-453 34-392 (412)
131 TIGR00890 2A0111 Oxalate/Forma 99.4 2.1E-12 4.6E-17 126.4 15.2 143 87-232 226-374 (377)
132 PF03092 BT1: BT1 family; Int 99.4 2E-12 4.3E-17 127.2 15.0 351 87-465 11-382 (433)
133 PRK11663 regulatory protein Uh 99.4 3.2E-12 7E-17 127.2 16.0 172 306-490 28-200 (434)
134 PRK05122 major facilitator sup 99.4 9E-12 1.9E-16 123.0 18.4 150 87-241 237-390 (399)
135 PRK11551 putative 3-hydroxyphe 99.4 7E-12 1.5E-16 124.1 17.4 149 88-239 242-395 (406)
136 cd06174 MFS The Major Facilita 99.4 4.6E-12 9.9E-17 122.7 15.2 162 76-239 185-351 (352)
137 TIGR02332 HpaX 4-hydroxyphenyl 99.4 1.3E-11 2.9E-16 121.8 17.7 181 300-493 7-194 (412)
138 TIGR00902 2A0127 phenyl propri 99.4 3.3E-11 7.1E-16 118.0 19.4 146 85-235 224-374 (382)
139 TIGR00893 2A0114 d-galactonate 99.4 6E-12 1.3E-16 124.1 14.0 162 318-492 11-173 (399)
140 TIGR00899 2A0120 sugar efflux 99.4 2.7E-11 5.7E-16 118.6 18.2 142 98-240 229-374 (375)
141 PRK10054 putative transporter; 99.4 1.7E-11 3.6E-16 120.3 16.6 165 313-491 19-185 (395)
142 PRK03545 putative arabinose tr 99.4 3E-11 6.4E-16 118.8 18.2 159 320-491 28-187 (390)
143 TIGR00710 efflux_Bcr_CflA drug 99.4 1.3E-11 2.9E-16 121.2 15.6 164 316-492 20-184 (385)
144 COG2814 AraJ Arabinose efflux 99.4 4E-11 8.7E-16 112.7 17.6 174 303-489 15-189 (394)
145 PRK12382 putative transporter; 99.4 2E-11 4.4E-16 120.1 16.5 146 87-237 237-386 (392)
146 TIGR00892 2A0113 monocarboxyla 99.4 8E-12 1.7E-16 124.9 13.5 148 84-234 259-415 (455)
147 TIGR00891 2A0112 putative sial 99.3 6.5E-11 1.4E-15 117.1 18.8 178 300-491 11-191 (405)
148 PRK10213 nepI ribonucleoside t 99.3 6.4E-11 1.4E-15 116.2 18.5 160 319-491 38-198 (394)
149 PRK09874 drug efflux system pr 99.3 1.9E-11 4.1E-16 121.1 14.1 132 106-237 260-395 (408)
150 PRK14995 methyl viologen resis 99.3 5.2E-11 1.1E-15 120.6 16.6 177 303-492 8-186 (495)
151 PRK10473 multidrug efflux syst 99.3 3.7E-11 8.1E-16 118.2 15.0 176 304-492 6-182 (392)
152 TIGR00883 2A0106 metabolite-pr 99.3 4.2E-11 9.1E-16 118.0 15.2 145 84-230 237-391 (394)
153 PRK03633 putative MFS family t 99.3 9.1E-11 2E-15 114.9 17.4 146 87-238 221-370 (381)
154 TIGR00711 efflux_EmrB drug res 99.3 2.7E-11 5.8E-16 123.0 14.0 170 310-492 11-181 (485)
155 PRK11273 glpT sn-glycerol-3-ph 99.3 9.5E-11 2.1E-15 117.4 17.3 162 320-491 48-211 (452)
156 TIGR00881 2A0104 phosphoglycer 99.3 1.5E-11 3.3E-16 120.4 11.3 163 317-492 11-175 (379)
157 PRK15462 dipeptide/tripeptide 99.3 1.4E-10 3.1E-15 114.4 17.7 159 314-484 22-185 (493)
158 PRK10077 xylE D-xylose transpo 99.3 1.4E-10 2.9E-15 117.6 17.9 154 86-242 291-460 (479)
159 PRK09556 uhpT sugar phosphate 99.3 9.1E-11 2E-15 118.0 16.4 152 85-238 277-447 (467)
160 PRK10091 MFS transport protein 99.3 1E-10 2.2E-15 114.5 16.3 163 317-492 19-182 (382)
161 PRK10504 putative transporter; 99.3 1.3E-10 2.9E-15 117.3 17.3 170 308-490 17-187 (471)
162 TIGR00712 glpT glycerol-3-phos 99.3 7.7E-11 1.7E-15 117.6 15.0 162 320-491 46-209 (438)
163 TIGR00900 2A0121 H+ Antiporter 99.3 9.7E-11 2.1E-15 114.1 15.0 160 317-484 15-175 (365)
164 PRK15403 multidrug efflux syst 99.3 2E-10 4.4E-15 113.4 17.2 155 325-492 40-195 (413)
165 PLN00028 nitrate transmembrane 99.3 4.1E-10 8.9E-15 113.3 19.7 159 316-488 51-219 (476)
166 TIGR00897 2A0118 polyol permea 99.3 3.8E-10 8.2E-15 111.3 18.9 149 86-239 242-400 (402)
167 PRK10489 enterobactin exporter 99.3 1.9E-10 4.1E-15 114.1 16.7 155 86-242 243-402 (417)
168 PF07690 MFS_1: Major Facilita 99.2 1.1E-10 2.4E-15 113.1 14.3 161 317-490 12-174 (352)
169 PRK09952 shikimate transporter 99.2 3.5E-10 7.6E-15 112.7 18.0 145 98-242 280-435 (438)
170 PRK15402 multidrug efflux syst 99.2 2.9E-10 6.2E-15 112.5 17.0 163 317-492 29-192 (406)
171 PRK11128 putative 3-phenylprop 99.2 5.7E-10 1.2E-14 109.3 18.9 142 87-233 226-372 (382)
172 PRK11652 emrD multidrug resist 99.2 4.4E-10 9.6E-15 110.7 17.8 161 319-492 26-187 (394)
173 TIGR00924 yjdL_sub1_fam amino 99.2 4.5E-10 9.7E-15 112.6 18.0 160 311-483 20-187 (475)
174 PRK03699 putative transporter; 99.2 5.7E-10 1.2E-14 109.8 18.4 171 300-483 6-178 (394)
175 PRK12307 putative sialic acid 99.2 2.8E-10 6E-15 113.4 16.3 157 305-474 22-179 (426)
176 TIGR00879 SP MFS transporter, 99.2 2.2E-10 4.9E-15 116.0 15.5 158 82-242 300-473 (481)
177 PRK11646 multidrug resistance 99.2 6E-10 1.3E-14 109.6 17.3 160 317-490 26-187 (400)
178 PRK11102 bicyclomycin/multidru 99.2 2.6E-10 5.6E-15 111.7 14.2 160 319-491 9-169 (377)
179 PRK11043 putative transporter; 99.2 1.1E-09 2.4E-14 108.1 18.2 151 323-486 28-179 (401)
180 TIGR00903 2A0129 major facilit 99.2 4.5E-10 9.8E-15 108.6 15.1 162 317-492 7-169 (368)
181 KOG3098|consensus 99.2 1.5E-08 3.3E-13 97.6 24.9 103 110-213 56-158 (461)
182 KOG3762|consensus 99.2 2.4E-10 5.3E-15 108.9 12.2 156 317-485 387-544 (618)
183 TIGR00882 2A0105 oligosacchari 99.2 8.7E-10 1.9E-14 108.6 16.8 137 99-235 249-390 (396)
184 PF05977 MFS_3: Transmembrane 99.2 7.4E-10 1.6E-14 110.9 16.3 149 85-235 237-389 (524)
185 PRK09705 cynX putative cyanate 99.2 6.4E-10 1.4E-14 109.2 15.4 154 85-243 224-385 (393)
186 PRK03893 putative sialic acid 99.2 6.2E-10 1.3E-14 113.3 15.4 158 303-473 22-180 (496)
187 KOG1330|consensus 99.2 3.1E-11 6.8E-16 113.1 5.1 147 336-495 69-216 (493)
188 PF06813 Nodulin-like: Nodulin 99.1 1.3E-09 2.9E-14 96.9 14.9 171 65-241 2-183 (250)
189 TIGR00894 2A0114euk Na(+)-depe 99.1 4.1E-10 8.8E-15 113.5 13.3 142 338-490 79-221 (465)
190 TIGR00886 2A0108 nitrite extru 99.1 1.3E-09 2.8E-14 106.3 16.3 164 314-490 14-190 (366)
191 TIGR00887 2A0109 phosphate:H+ 99.1 3.7E-09 7.9E-14 107.5 19.8 147 338-492 59-228 (502)
192 TIGR00880 2_A_01_02 Multidrug 99.1 6.8E-10 1.5E-14 91.6 11.8 135 343-490 6-140 (141)
193 PRK10207 dipeptide/tripeptide 99.1 3.3E-09 7.2E-14 106.4 18.7 157 312-480 25-186 (489)
194 TIGR00898 2A0119 cation transp 99.1 1.5E-09 3.3E-14 110.7 16.3 135 108-242 359-497 (505)
195 PF11700 ATG22: Vacuole efflux 99.1 3.8E-09 8.3E-14 104.6 17.5 168 69-240 286-468 (477)
196 PRK15034 nitrate/nitrite trans 99.1 9.4E-09 2E-13 100.5 19.6 180 302-490 35-234 (462)
197 TIGR02718 sider_RhtX_FptX side 99.1 6.5E-09 1.4E-13 102.2 17.6 145 88-235 230-386 (390)
198 PRK11010 ampG muropeptide tran 99.1 5.8E-09 1.3E-13 105.2 17.0 149 90-241 247-404 (491)
199 PRK09584 tppB putative tripept 99.1 8.4E-09 1.8E-13 104.1 18.0 158 313-482 33-195 (500)
200 COG2223 NarK Nitrate/nitrite t 99.1 7.1E-09 1.5E-13 96.7 15.8 162 317-490 30-195 (417)
201 PRK10406 alpha-ketoglutarate t 99.0 8.8E-09 1.9E-13 102.6 17.6 152 87-240 264-424 (432)
202 TIGR00792 gph sugar (Glycoside 99.0 9.2E-09 2E-13 102.9 17.2 114 102-215 255-376 (437)
203 PRK15075 citrate-proton sympor 99.0 7.5E-09 1.6E-13 103.2 16.3 129 85-215 257-390 (434)
204 KOG0569|consensus 99.0 6.2E-09 1.4E-13 101.3 15.0 174 63-242 269-457 (485)
205 KOG2504|consensus 99.0 2.9E-09 6.4E-14 106.1 12.6 167 71-240 303-476 (509)
206 TIGR00885 fucP L-fucose:H+ sym 99.0 1.1E-08 2.3E-13 100.8 16.4 157 318-484 20-203 (410)
207 PF06609 TRI12: Fungal trichot 99.0 7.1E-09 1.5E-13 103.6 14.1 155 321-489 64-218 (599)
208 PRK11902 ampG muropeptide tran 99.0 1.5E-08 3.2E-13 100.1 16.4 147 90-239 234-389 (402)
209 TIGR00926 2A1704 Peptide:H+ sy 99.0 2E-07 4.2E-12 95.8 24.6 150 84-236 6-178 (654)
210 TIGR01272 gluP glucose/galacto 99.0 3.2E-08 6.9E-13 93.3 17.6 126 98-226 172-301 (310)
211 PRK06814 acylglycerophosphoeth 99.0 2E-08 4.4E-13 112.7 19.1 142 339-491 56-197 (1140)
212 COG2270 Permeases of the major 99.0 8.4E-09 1.8E-13 96.3 13.1 175 64-242 252-431 (438)
213 PRK08633 2-acyl-glycerophospho 99.0 7.8E-09 1.7E-13 116.4 15.7 133 98-230 262-400 (1146)
214 KOG2615|consensus 99.0 2.1E-09 4.5E-14 98.3 8.6 142 337-492 70-217 (451)
215 KOG0637|consensus 98.9 4.9E-09 1.1E-13 98.4 10.3 138 75-219 45-205 (498)
216 PTZ00207 hypothetical protein; 98.9 2.9E-08 6.2E-13 100.0 16.5 165 317-491 43-208 (591)
217 TIGR01301 GPH_sucrose GPH fami 98.9 4.3E-08 9.4E-13 96.6 17.4 186 305-492 9-222 (477)
218 PF03825 Nuc_H_symport: Nucleo 98.9 5.9E-08 1.3E-12 94.3 18.1 162 77-241 218-397 (400)
219 TIGR00901 2A0125 AmpG-related 98.9 2.3E-08 5E-13 97.0 15.4 161 319-491 6-181 (356)
220 KOG3764|consensus 98.9 2.6E-09 5.6E-14 98.3 7.7 145 336-493 107-252 (464)
221 PRK09848 glucuronide transport 98.9 6.6E-08 1.4E-12 96.9 18.4 125 89-215 251-384 (448)
222 TIGR00806 rfc RFC reduced fola 98.9 3.6E-08 7.9E-13 94.8 15.4 173 302-492 29-206 (511)
223 TIGR00805 oat sodium-independe 98.9 1.4E-08 3E-13 105.0 13.4 184 306-491 38-283 (633)
224 PF01306 LacY_symp: LacY proto 98.9 5.2E-08 1.1E-12 93.0 15.4 163 74-240 233-401 (412)
225 COG0477 ProP Permeases of the 98.9 4.4E-08 9.4E-13 93.0 15.3 151 78-231 14-176 (338)
226 PRK11195 lysophospholipid tran 98.9 6.1E-08 1.3E-12 95.2 16.4 130 98-228 235-370 (393)
227 KOG0253|consensus 98.9 4.6E-08 1E-12 89.1 13.9 129 112-240 389-519 (528)
228 PF02487 CLN3: CLN3 protein; 98.9 1.9E-07 4E-12 88.7 18.2 128 107-239 62-194 (402)
229 KOG4332|consensus 98.9 5.2E-08 1.1E-12 84.6 12.9 354 86-484 57-427 (454)
230 TIGR00896 CynX cyanate transpo 98.9 4E-08 8.6E-13 95.3 13.8 127 86-216 217-345 (355)
231 TIGR00769 AAA ADP/ATP carrier 98.8 1.8E-05 3.8E-10 77.8 31.7 126 88-216 25-188 (472)
232 PRK10133 L-fucose transporter; 98.8 1.2E-07 2.7E-12 94.2 16.7 135 317-461 42-177 (438)
233 KOG2532|consensus 98.8 4.3E-08 9.2E-13 96.6 12.4 144 337-491 75-219 (466)
234 PRK10429 melibiose:sodium symp 98.8 3.9E-07 8.4E-12 91.9 18.0 114 102-215 264-389 (473)
235 PF13347 MFS_2: MFS/sugar tran 98.8 1.5E-07 3.3E-12 93.7 14.4 133 80-215 239-380 (428)
236 KOG0255|consensus 98.7 7.6E-08 1.6E-12 98.5 11.2 139 337-492 120-258 (521)
237 KOG2533|consensus 98.6 2.6E-07 5.7E-12 91.3 12.1 144 337-493 83-232 (495)
238 KOG3574|consensus 98.6 8.4E-06 1.8E-10 74.9 20.3 136 72-213 37-189 (510)
239 KOG3810|consensus 98.6 1.7E-06 3.8E-11 78.3 15.6 360 98-484 35-417 (433)
240 PRK09669 putative symporter Ya 98.6 2.3E-06 4.9E-11 85.7 18.6 111 105-215 265-384 (444)
241 PF06963 FPN1: Ferroportin1 (F 98.6 0.00012 2.7E-09 71.1 29.5 128 321-456 278-411 (432)
242 PF06779 DUF1228: Protein of u 98.6 1.4E-07 3E-12 67.6 6.5 80 79-161 5-84 (85)
243 COG3104 PTR2 Dipeptide/tripept 98.6 3.5E-07 7.5E-12 87.7 11.1 139 339-488 65-206 (498)
244 KOG0254|consensus 98.6 1E-06 2.2E-11 89.8 14.2 140 338-492 92-233 (513)
245 TIGR00788 fbt folate/biopterin 98.6 7.8E-07 1.7E-11 89.1 12.9 119 98-216 282-410 (468)
246 KOG3762|consensus 98.6 1.1E-07 2.3E-12 91.3 6.1 162 75-239 380-546 (618)
247 COG2807 CynX Cyanate permease 98.5 2.7E-06 5.8E-11 78.1 14.4 166 62-237 208-382 (395)
248 COG2211 MelB Na+/melibiose sym 98.5 5.7E-06 1.2E-10 80.1 17.3 127 86-214 256-391 (467)
249 PF06813 Nodulin-like: Nodulin 98.5 1.7E-06 3.8E-11 77.2 12.5 147 309-463 10-157 (250)
250 KOG4686|consensus 98.5 2.3E-06 5E-11 75.3 12.8 144 91-239 290-442 (459)
251 PF00083 Sugar_tr: Sugar (and 98.5 8.3E-09 1.8E-13 103.7 -3.8 143 339-492 50-195 (451)
252 PF05978 UNC-93: Ion channel r 98.4 1E-05 2.2E-10 66.5 14.2 128 86-215 20-147 (156)
253 COG0738 FucP Fucose permease [ 98.4 1.4E-05 3E-10 74.7 14.9 134 319-462 31-165 (422)
254 PF03209 PUCC: PUCC protein; 98.4 3.8E-05 8.3E-10 72.4 17.9 138 98-235 238-393 (403)
255 PRK11462 putative transporter; 98.4 4.8E-05 1E-09 76.3 20.1 113 103-215 262-383 (460)
256 KOG0252|consensus 98.3 2E-06 4.4E-11 81.2 8.3 172 66-243 304-501 (538)
257 PF03219 TLC: TLC ATP/ADP tran 98.3 0.0027 5.8E-08 63.1 29.9 115 102-216 56-203 (491)
258 COG3202 ATP/ADP translocase [E 98.3 0.0053 1.2E-07 59.4 30.4 115 102-216 59-207 (509)
259 KOG2816|consensus 98.2 2.1E-05 4.7E-10 77.4 13.3 136 344-495 71-206 (463)
260 TIGR00939 2a57 Equilibrative N 98.2 0.0001 2.3E-09 72.4 16.7 115 339-456 311-427 (437)
261 KOG1237|consensus 98.1 0.00029 6.2E-09 71.4 20.0 151 83-236 55-241 (571)
262 KOG2325|consensus 98.1 2.6E-05 5.7E-10 75.9 11.4 149 337-494 73-235 (488)
263 PF12832 MFS_1_like: MFS_1 lik 98.1 8.1E-06 1.8E-10 58.2 5.9 65 77-144 11-75 (77)
264 PF05631 DUF791: Protein of un 98.1 0.0002 4.3E-09 66.6 16.2 157 323-493 56-221 (354)
265 PF13000 Acatn: Acetyl-coenzym 98.1 0.00031 6.7E-09 67.8 17.7 139 70-213 4-174 (544)
266 PF00854 PTR2: POT family; In 98.1 0.00041 9E-09 67.6 18.8 104 135-238 2-121 (372)
267 KOG1479|consensus 97.7 0.0044 9.5E-08 58.9 18.2 84 156-244 116-208 (406)
268 KOG2563|consensus 97.7 0.00071 1.5E-08 64.4 12.5 157 297-463 41-202 (480)
269 PF07672 MFS_Mycoplasma: Mycop 97.7 0.0015 3.3E-08 57.7 13.7 51 189-239 2-61 (267)
270 TIGR00926 2A1704 Peptide:H+ sy 97.7 0.0012 2.7E-08 68.3 15.1 143 339-486 27-180 (654)
271 PF02487 CLN3: CLN3 protein; 97.6 0.0022 4.7E-08 61.5 14.8 111 102-216 279-394 (402)
272 PF05978 UNC-93: Ion channel r 97.4 0.0097 2.1E-07 49.1 13.9 108 339-460 41-148 (156)
273 PF03092 BT1: BT1 family; Int 97.3 0.0035 7.5E-08 62.2 12.6 131 350-490 39-177 (433)
274 PF12832 MFS_1_like: MFS_1 lik 97.3 0.0015 3.3E-08 46.6 7.3 64 311-374 10-74 (77)
275 PF03137 OATP: Organic Anion T 97.2 4.6E-05 1E-09 77.0 -1.6 170 317-487 19-249 (539)
276 PF06963 FPN1: Ferroportin1 (F 97.2 0.013 2.8E-07 57.4 14.5 137 85-224 277-423 (432)
277 PRK03612 spermidine synthase; 97.1 0.038 8.3E-07 56.0 18.0 116 98-215 44-167 (521)
278 KOG3098|consensus 97.1 0.036 7.7E-07 54.3 16.4 102 113-215 288-410 (461)
279 PF01770 Folate_carrier: Reduc 97.1 0.02 4.3E-07 55.1 14.5 131 347-492 53-185 (412)
280 TIGR00769 AAA ADP/ATP carrier 97.1 0.028 6E-07 55.8 15.9 113 349-462 58-190 (472)
281 KOG3097|consensus 96.9 0.32 6.9E-06 44.8 20.0 99 113-212 67-180 (390)
282 KOG3626|consensus 96.8 0.015 3.2E-07 59.9 11.4 173 319-493 115-347 (735)
283 KOG3880|consensus 96.2 0.021 4.6E-07 51.6 7.6 129 106-239 64-198 (409)
284 PF01733 Nucleoside_tran: Nucl 96.2 0.0012 2.7E-08 62.2 -0.2 117 339-457 186-304 (309)
285 PRK03612 spermidine synthase; 96.1 0.2 4.4E-06 50.8 15.1 50 435-484 143-193 (521)
286 COG0477 ProP Permeases of the 95.9 0.32 6.8E-06 45.5 15.3 136 322-468 23-165 (338)
287 PF00854 PTR2: POT family; In 95.8 0.046 1E-06 53.3 9.0 117 366-486 2-121 (372)
288 KOG0637|consensus 95.6 0.02 4.3E-07 55.0 5.2 155 301-458 33-200 (498)
289 TIGR00939 2a57 Equilibrative N 95.3 0.48 1E-05 47.0 14.0 108 106-214 309-429 (437)
290 KOG1479|consensus 95.1 1.3 2.9E-05 42.5 15.6 44 314-357 31-74 (406)
291 PF03219 TLC: TLC ATP/ADP tran 94.6 1 2.2E-05 45.2 14.2 114 347-462 71-205 (491)
292 PF06779 DUF1228: Protein of u 94.4 0.31 6.6E-06 35.3 7.3 68 318-385 9-77 (85)
293 KOG3880|consensus 94.2 0.26 5.7E-06 44.9 8.1 119 98-216 281-401 (409)
294 COG3202 ATP/ADP translocase [E 93.7 5.2 0.00011 39.5 16.2 116 347-462 74-209 (509)
295 KOG4332|consensus 91.5 0.61 1.3E-05 41.7 6.4 136 346-494 83-226 (454)
296 KOG1237|consensus 91.2 8.3 0.00018 39.7 15.1 147 339-485 77-242 (571)
297 PF01733 Nucleoside_tran: Nucl 87.3 0.2 4.3E-06 47.3 0.3 106 108-213 186-304 (309)
298 PF07672 MFS_Mycoplasma: Mycop 86.0 26 0.00057 31.7 13.2 102 107-209 144-255 (267)
299 KOG3574|consensus 84.9 20 0.00043 34.5 11.7 34 424-457 156-189 (510)
300 PF13000 Acatn: Acetyl-coenzym 84.3 7 0.00015 38.8 9.0 48 159-206 407-454 (544)
301 PF11947 DUF3464: Protein of u 82.1 6.5 0.00014 32.1 6.7 33 420-452 113-145 (153)
302 PF06912 DUF1275: Protein of u 80.6 39 0.00084 29.6 16.0 26 194-219 167-192 (209)
303 COG4262 Predicted spermidine s 80.1 55 0.0012 31.1 13.8 85 100-184 39-132 (508)
304 COG1230 CzcD Co/Zn/Cd efflux s 80.0 43 0.00093 31.0 11.9 153 63-228 22-194 (296)
305 COG3619 Predicted membrane pro 78.4 48 0.001 29.4 15.5 71 63-133 9-84 (226)
306 PF03547 Mem_trans: Membrane t 75.3 16 0.00034 35.8 8.7 17 347-363 7-23 (385)
307 PF11947 DUF3464: Protein of u 74.8 31 0.00068 28.2 8.5 81 126-209 56-146 (153)
308 KOG2881|consensus 74.3 66 0.0014 28.9 12.0 29 350-378 255-283 (294)
309 KOG2601|consensus 73.0 34 0.00073 32.8 9.3 31 424-454 409-439 (503)
310 PF04346 EutH: Ethanolamine ut 68.0 1.1E+02 0.0024 29.0 13.1 116 106-223 49-170 (354)
311 PRK10263 DNA translocase FtsK; 68.0 95 0.0021 35.3 12.8 24 112-135 60-83 (1355)
312 COG5336 Uncharacterized protei 65.3 25 0.00053 26.5 5.4 34 107-140 45-79 (116)
313 PF02535 Zip: ZIP Zinc transpo 63.9 1.3E+02 0.0028 28.3 15.6 34 156-189 259-293 (317)
314 KOG3810|consensus 62.2 22 0.00048 33.7 5.9 95 106-200 273-369 (433)
315 COG1422 Predicted membrane pro 57.9 1.2E+02 0.0027 26.0 12.4 39 202-241 31-70 (201)
316 PF02990 EMP70: Endomembrane p 54.6 1.2E+02 0.0026 31.2 10.4 24 341-364 303-326 (521)
317 PRK10263 DNA translocase FtsK; 53.5 91 0.002 35.4 9.6 25 448-472 142-166 (1355)
318 PF02632 BioY: BioY family; I 53.4 50 0.0011 27.1 6.1 26 110-135 59-84 (148)
319 COG5336 Uncharacterized protei 52.5 27 0.00059 26.3 3.9 36 432-467 37-72 (116)
320 COG4262 Predicted spermidine s 51.5 2.3E+02 0.005 27.2 13.3 80 399-481 104-184 (508)
321 KOG2601|consensus 49.6 2.6E+02 0.0056 27.2 13.5 44 440-483 178-221 (503)
322 TIGR01666 YCCS hypothetical me 47.8 2.3E+02 0.0051 30.3 11.4 44 131-174 54-98 (704)
323 COG1268 BioY Uncharacterized c 47.5 92 0.002 26.6 6.9 24 110-133 88-111 (184)
324 COG4769 Predicted membrane pro 47.1 22 0.00048 29.2 3.0 53 112-170 81-133 (181)
325 TIGR01667 YCCS_YHJK integral m 45.6 2.8E+02 0.0062 29.7 11.7 44 131-174 54-98 (701)
326 PF05297 Herpes_LMP1: Herpesvi 45.1 6.7 0.00015 35.1 -0.1 13 481-493 178-190 (381)
327 PF02694 UPF0060: Uncharacteri 43.5 32 0.0007 26.0 3.2 51 104-154 54-104 (107)
328 PF04341 DUF485: Protein of un 41.6 1.4E+02 0.003 22.0 6.4 53 303-356 18-70 (91)
329 PF11151 DUF2929: Protein of u 41.3 94 0.002 20.6 4.8 41 202-242 15-55 (57)
330 PRK15086 ethanolamine utilizat 40.9 3.4E+02 0.0073 26.1 12.3 105 105-213 49-162 (372)
331 PF07857 DUF1632: CEO family ( 39.5 3E+02 0.0064 25.1 9.5 14 435-448 77-90 (254)
332 PRK02237 hypothetical protein; 39.4 54 0.0012 24.9 3.8 50 105-154 57-106 (109)
333 PHA03242 envelope glycoprotein 39.2 2.9E+02 0.0063 27.2 9.6 21 435-455 286-306 (428)
334 PHA03237 envelope glycoprotein 38.6 2.2E+02 0.0047 28.0 8.7 18 435-452 289-306 (424)
335 COG3162 Predicted membrane pro 37.7 1.7E+02 0.0037 21.8 7.2 67 287-356 12-78 (102)
336 PF03606 DcuC: C4-dicarboxylat 36.0 2.4E+02 0.0053 28.4 9.2 18 223-240 6-23 (465)
337 PF10785 NADH-u_ox-rdase: NADH 35.5 1.2E+02 0.0026 22.2 5.0 41 116-156 30-77 (86)
338 KOG1484|consensus 34.7 4E+02 0.0087 25.2 10.7 32 198-229 216-247 (354)
339 PF06645 SPC12: Microsomal sig 34.6 1.7E+02 0.0036 20.8 6.3 40 128-167 9-48 (76)
340 PF01528 Herpes_glycop: Herpes 34.6 2.5E+02 0.0053 27.2 8.3 14 174-187 41-54 (374)
341 PF07760 DUF1616: Protein of u 33.4 4E+02 0.0087 24.8 10.4 56 160-216 22-77 (287)
342 PF06123 CreD: Inner membrane 33.4 5E+02 0.011 25.9 10.5 38 345-382 301-338 (430)
343 PRK13629 threonine/serine tran 32.7 5.2E+02 0.011 25.9 17.1 39 187-226 18-56 (443)
344 PF09527 ATPase_gene1: Putativ 31.8 1.5E+02 0.0032 19.2 5.7 33 112-144 8-41 (55)
345 PF14851 FAM176: FAM176 family 31.2 63 0.0014 26.5 3.3 7 470-476 25-31 (153)
346 PF05313 Pox_P21: Poxvirus P21 31.1 3.3E+02 0.0071 23.0 7.9 26 430-455 110-135 (189)
347 PRK15015 carbon starvation pro 30.9 6.6E+02 0.014 26.5 19.0 39 183-222 78-117 (701)
348 KOG1278|consensus 29.5 57 0.0012 32.8 3.3 17 344-360 372-388 (628)
349 PRK10692 hypothetical protein; 29.3 2.2E+02 0.0048 20.6 5.2 16 133-148 3-18 (92)
350 PF10183 ESSS: ESSS subunit of 29.1 70 0.0015 24.4 3.2 37 459-495 52-88 (105)
351 KOG4255|consensus 29.0 5.2E+02 0.011 24.7 11.6 23 366-388 80-102 (439)
352 TIGR02230 ATPase_gene1 F0F1-AT 28.2 2.6E+02 0.0057 21.1 6.7 9 361-369 69-77 (100)
353 COG2233 UraA Xanthine/uracil p 28.0 3E+02 0.0064 27.5 7.9 100 98-197 43-145 (451)
354 PF07857 DUF1632: CEO family ( 27.6 2.1E+02 0.0045 26.0 6.3 21 220-240 116-136 (254)
355 PF08997 UCR_6-4kD: Ubiquinol- 27.6 1.3E+02 0.0028 19.8 3.6 39 183-221 3-41 (56)
356 PRK10697 DNA-binding transcrip 27.1 1.2E+02 0.0026 23.7 4.0 14 232-245 56-69 (118)
357 PTZ00370 STEVOR; Provisional 27.0 1E+02 0.0022 28.2 4.1 29 468-496 259-287 (296)
358 PRK11715 inner membrane protei 25.7 6.8E+02 0.015 25.0 10.6 37 346-382 308-344 (436)
359 PRK11715 inner membrane protei 25.6 6.8E+02 0.015 25.0 10.0 72 162-239 332-404 (436)
360 PRK03818 putative transporter; 25.1 6.6E+02 0.014 26.1 10.2 83 105-188 436-520 (552)
361 PRK11469 hypothetical protein; 25.0 3.4E+02 0.0074 23.3 7.0 32 119-150 150-181 (188)
362 PF06123 CreD: Inner membrane 24.8 7E+02 0.015 24.9 10.2 69 164-238 328-397 (430)
363 PF01914 MarC: MarC family int 24.8 4.7E+02 0.01 22.8 8.2 64 419-483 21-85 (203)
364 PF12805 FUSC-like: FUSC-like 24.8 5.6E+02 0.012 23.7 9.9 37 138-174 3-40 (284)
365 PRK14229 camphor resistance pr 24.6 3.3E+02 0.0071 20.9 6.9 47 141-187 33-79 (108)
366 PF07556 DUF1538: Protein of u 24.0 5E+02 0.011 22.9 9.1 85 155-240 60-147 (212)
367 COG2119 Predicted membrane pro 23.2 2.5E+02 0.0055 23.9 5.5 38 342-379 141-178 (190)
368 PRK14199 camphor resistance pr 23.0 3.9E+02 0.0085 21.3 8.6 23 164-186 69-91 (128)
369 PRK11469 hypothetical protein; 22.8 4.9E+02 0.011 22.4 14.4 34 348-381 148-181 (188)
370 COG3086 RseC Positive regulato 22.6 3.7E+02 0.0081 21.8 6.0 53 98-150 66-119 (150)
371 PF10762 DUF2583: Protein of u 22.5 2.8E+02 0.0061 20.0 4.7 15 133-147 3-17 (89)
372 TIGR00844 c_cpa1 na(+)/h(+) an 22.1 1.1E+03 0.023 25.9 25.9 28 105-132 10-37 (810)
373 PF09605 Trep_Strep: Hypotheti 22.0 5.1E+02 0.011 22.2 9.1 43 341-383 34-76 (186)
374 PF02694 UPF0060: Uncharacteri 21.9 2.5E+02 0.0054 21.4 4.7 47 336-382 55-101 (107)
375 PF13829 DUF4191: Domain of un 21.8 4E+02 0.0087 23.6 6.7 68 197-264 29-99 (224)
376 PRK02237 hypothetical protein; 21.7 2.9E+02 0.0063 21.1 5.0 47 336-382 57-103 (109)
377 PRK14230 camphor resistance pr 21.4 4.1E+02 0.0088 20.8 7.3 47 140-186 36-82 (119)
378 KOG1277|consensus 21.4 4.6E+02 0.0099 26.1 7.5 22 344-365 336-357 (593)
379 PF02554 CstA: Carbon starvati 20.2 8E+02 0.017 23.8 17.2 41 183-224 47-88 (376)
No 1
>KOG0569|consensus
Probab=100.00 E-value=1.4e-44 Score=346.22 Aligned_cols=442 Identities=25% Similarity=0.373 Sum_probs=372.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCC-----CCC--CCCCh----hhHHHHHHHHHHhhhhhhhHHhhh
Q psy4866 61 LFLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKES-----PIP--MSPNE----GSWVVAIIEIGNYLSPIPAGMLVN 129 (537)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~s~~~----~~~~~s~~~~~~~~~~~~~G~l~d 129 (537)
..+...+++.++++.|-.||+.+..++..+.+.+-.+ .+| .++.+ .+.+.+++.+|.++|+++.|+++|
T Consensus 6 t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~ 85 (485)
T KOG0569|consen 6 TRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLAD 85 (485)
T ss_pred cHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777779999999988877655543110 344 44443 467789999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHH
Q psy4866 130 RIGRKWSLLMTGPITTASWIIAMYS---RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGI 206 (537)
Q Consensus 130 r~Grr~~l~~~~~l~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 206 (537)
|+|||..++++.++..++.++..++ +++.+++++|++.|+..|.......-++.|..|++.||....+.+.+..+|.
T Consensus 86 ~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ 165 (485)
T KOG0569|consen 86 RFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGI 165 (485)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHH
Confidence 9999999999998888888777654 5899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh------hhHHHHHHHHHHHHHHHHHHhhcccCChHHHHH-hCCHHHHHHHHHhhcCCChhhHHHH--HHHH
Q psy4866 207 LYTYVLGSE------LSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAI-KNQEGKAIESLKWLRNKTADQVQSE--LQII 277 (537)
Q Consensus 207 ~i~~~l~~~------~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~-~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~ 277 (537)
+++..++.. -.|++.+.+..+++++.++...++||||||+.. +++.++|++.++++++.++++.+.+ .++.
T Consensus 166 ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~ 245 (485)
T KOG0569|consen 166 LLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREI 245 (485)
T ss_pred HHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHH
Confidence 999776633 369999999999999999999999999999998 8999999999999999875433322 2333
Q ss_pred HHhhhhcccccchHHhhc-cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhH
Q psy4866 278 KQNTSKNVERTNFREFMG-RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPS 355 (537)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 355 (537)
+++...++++.+++++++ +..+++..+.+.+....++.+.+.+.+|...++.+.|.+. .+.+.....++..++.++++
T Consensus 246 ~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~ 325 (485)
T KOG0569|consen 246 EEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVS 325 (485)
T ss_pred HHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333335778999999 6778888899999999999999999999999999999874 45688888999999999999
Q ss_pred hhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCcccc
Q psy4866 356 TYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMK 435 (537)
Q Consensus 356 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 435 (537)
.++.||.|||++++.+..++.+..+++........... ....+..+...+++..+++.+.+|+.+-+.+|++|++.|
T Consensus 326 ~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~---~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R 402 (485)
T KOG0569|consen 326 PFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG---SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSAR 402 (485)
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccch
Confidence 99999999999999999999998888877665544000 011233467778888899999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCCCCHHHHHHHHhcC
Q psy4866 436 AVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKGKTFNEIQYMFKYG 506 (537)
Q Consensus 436 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (537)
..++++...+.++..++....+..+.+..|. ..|+++.+.+++..+..++++||||+|+..|+.++.++.
T Consensus 403 ~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 403 SAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999999999999999999988 578888999999999999999999999999988776655
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3e-43 Score=359.41 Aligned_cols=415 Identities=15% Similarity=0.158 Sum_probs=325.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHH
Q psy4866 62 FLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTG 141 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 141 (537)
+++|.++++++++.+.++++...++.++|.+.+ +++++..+.+++.+++.++.+++++++|+++||+|||+++++++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~---~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~l 239 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEK---DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICL 239 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 567888888999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh------
Q psy4866 142 PITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE------ 215 (537)
Q Consensus 142 ~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~------ 215 (537)
++.++++++++++++++.++++|++.|++.|+..+...+++.|++|+++|++.++++.+++.+|.++++.++..
T Consensus 240 il~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 240 SVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988876532
Q ss_pred -----------hhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhh---HHHHH--HHHHH
Q psy4866 216 -----------LSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQ---VQSEL--QIIKQ 279 (537)
Q Consensus 216 -----------~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~---~~~~~--~~~~~ 279 (537)
.+||+.+++.++++++.++..+++||||+|+..+++.+++.+.++++.+.+... ..... +..+.
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~ 399 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKT 399 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHH
Confidence 269999999988888888888889999999999999999999999988765321 11110 00000
Q ss_pred hh------h-hccc------------------ccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc---
Q psy4866 280 NT------S-KNVE------------------RTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS--- 331 (537)
Q Consensus 280 ~~------~-~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 331 (537)
.. + ++.. ...++++++++.++.++++..++++.. .+++.+..|+|.++...
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~-~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 400 IHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLS-FGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred hhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0000 013566777777777776666665544 45888999999875431
Q ss_pred ---------------------------------------CC---------------------------------------
Q psy4866 332 ---------------------------------------ET--------------------------------------- 333 (537)
Q Consensus 332 ---------------------------------------~~--------------------------------------- 333 (537)
+.
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 00
Q ss_pred -------------------------C-----C-----ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHH
Q psy4866 334 -------------------------F-----L-----PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLF 378 (537)
Q Consensus 334 -------------------------~-----~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 378 (537)
. . .......+..++.+++.+++|+++||+|||+++..+.++.+++
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~ 638 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCIS 638 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 0 0 0012244566888999999999999999999999998888888
Q ss_pred HHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHH
Q psy4866 379 SFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFF 458 (537)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 458 (537)
++++.+. ......++..++++++... ..+...++++|++|++.|++++|+.+....+|++++|.+.+
T Consensus 639 ~ll~~~~------------~s~~~ll~~~~l~g~~~~~-~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g 705 (742)
T TIGR01299 639 CFFLSFG------------NSESAMIALLCLFGGLSIA-AWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFG 705 (742)
T ss_pred HHHHHHH------------ccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776653 1222333333444444443 33456689999999999999999999999999999999999
Q ss_pred HHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCCCC
Q psy4866 459 LMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKGKT 495 (537)
Q Consensus 459 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (537)
.+.+. +...+|++.+++.++++++. .++||++++.
T Consensus 706 ~L~~~-~~~~pf~i~a~~lll~~ll~-~~LPET~~~~ 740 (742)
T TIGR01299 706 SFVGI-TKAAPILFASAALACGGLLA-LKLPDTRGQV 740 (742)
T ss_pred HHHHh-hhHHHHHHHHHHHHHHHHHH-HhCCCCcccc
Confidence 88775 45567777777777766655 4568888754
No 3
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3e-41 Score=341.13 Aligned_cols=428 Identities=21% Similarity=0.324 Sum_probs=323.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCC--------CCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhh
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPI--------PMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRK 134 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr 134 (537)
..+.++.+++++.+.++++.+.+++..|.+.+ ++ +.+..+.+++.+++.++..++++++|+++||+|||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr 85 (479)
T PRK10077 9 YIFSITLVATLGGLLFGYDTAVISGTVESLNT---VFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRR 85 (479)
T ss_pred HHHHHHHHHHHHHHhcCcccceehHhHHHHHH---HhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 45666777788899999999999999998888 55 88889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH------------hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHH
Q psy4866 135 WSLLMTGPITTASWIIAMYS------------RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISC 202 (537)
Q Consensus 135 ~~l~~~~~l~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 202 (537)
++++++.++++++.++++++ ++++.++++|+++|++.|...+...++++|++|+++|++++++.+.+.
T Consensus 86 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~ 165 (479)
T PRK10077 86 DSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAI 165 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHH
Confidence 99999999999998888763 235678899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh------------hhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhH
Q psy4866 203 HLGILYTYVLGSE------------LSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQV 270 (537)
Q Consensus 203 ~~G~~i~~~l~~~------------~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~ 270 (537)
.+|.++++.++.. ++||+.|++.+++.++..+..+++||+|+|+..+++.+++.+..++..+... .
T Consensus 166 ~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~--~ 243 (479)
T PRK10077 166 IFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL--A 243 (479)
T ss_pred HHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh--H
Confidence 9999988776532 4899999999888877777777899999999888888888777776654432 1
Q ss_pred HHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCC-hhHHHHHHHHHHH
Q psy4866 271 QSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLP-SDYISILFAIILL 349 (537)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 349 (537)
+...++.++....+. ...+..+. ..............+....+.+...+|.|.+.+..+.+.. ........++..+
T Consensus 244 ~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~ 320 (479)
T PRK10077 244 TQALQEIKHSLDHGR--KTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINL 320 (479)
T ss_pred HHHHHHHHHHHHHhh--hhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHH
Confidence 111111111111000 00011111 1111112222233344444556667788888887776543 3455666788889
Q ss_pred HHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhcccc
Q psy4866 350 VSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEY 429 (537)
Q Consensus 350 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (537)
++.+++++++||+|||++++.+.++.+++.+++...... ..........+.+++.++...+.+..+.++.|.
T Consensus 321 i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 392 (479)
T PRK10077 321 TFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT--------QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEI 392 (479)
T ss_pred HHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHHhccccchhHHHhHhh
Confidence 999999999999999999999998888887776543211 112223334445555555555567777999999
Q ss_pred CCccccchhhHHHHHHHHHHHHHHHHHHHHHH------HhhccchhhhHhhHHHHHHHHHHHhhccCCCCCCHHHHHHHH
Q psy4866 430 FSSNMKAVSCAVINILCTTLGLISYKLFFLMD------KHIGMYSNFLFGGVSSLVCTVYLYYFLLETKGKTFNEIQYMF 503 (537)
Q Consensus 430 ~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (537)
+|++.|+++.|+.+...+++.++++.+.+.+. +..++...|++.+++++++.++.+.+.||+|+++.+|.++..
T Consensus 393 ~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 472 (479)
T PRK10077 393 FPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALW 472 (479)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHH
Confidence 99999999999999999999999977776544 567777788888888888877777788999998888776665
Q ss_pred hcC
Q psy4866 504 KYG 506 (537)
Q Consensus 504 ~~~ 506 (537)
+++
T Consensus 473 ~~~ 475 (479)
T PRK10077 473 EPE 475 (479)
T ss_pred hhc
Confidence 443
No 4
>KOG0254|consensus
Probab=100.00 E-value=1.8e-41 Score=342.42 Aligned_cols=447 Identities=25% Similarity=0.411 Sum_probs=370.2
Q ss_pred HHHHHHHHHHHHhhhhhhhh--hccchhhHHhhhcCCCCCCCCC----ChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhH
Q psy4866 62 FLFSFLCVTACIAAFTTGMS--FAWSAPVLEELLSKESPIPMSP----NEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKW 135 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~----~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~ 135 (537)
.......+...++.+..+++ .+..++....+.+......... .+.+|+.+++.++..++++++|+++|++|||+
T Consensus 41 ~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~ 120 (513)
T KOG0254|consen 41 PFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKK 120 (513)
T ss_pred eehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 35566677778888888887 7788888888776322112222 34489999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 136 SLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 136 ~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
.++++.+++.+|++++++++|+++++++|+++|+|.|+...+.+.+++|..|++.||...+..+....+|..++..++..
T Consensus 121 ~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~ 200 (513)
T KOG0254|consen 121 TLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG 200 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888776
Q ss_pred h-----hHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhh----ccc
Q psy4866 216 L-----SYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSK----NVE 286 (537)
Q Consensus 216 ~-----~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 286 (537)
. +||..+.+..+++++..+..+++||||+|+.++++.+++++.++++++.++.+...+.++.+..... .+.
T Consensus 201 ~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
T KOG0254|consen 201 TSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEG 280 (513)
T ss_pred hccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccc
Confidence 5 6999999999999988877889999999999999999999999999995545555555444411111 111
Q ss_pred ccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcH
Q psy4866 287 RTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRV 366 (537)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 366 (537)
+..+++++++..+++.++...+..++++++.+...+|.+.+++..+...+......+.++..+++..++.++.||+|||+
T Consensus 281 ~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ 360 (513)
T KOG0254|consen 281 KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRK 360 (513)
T ss_pred cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 23467777767888889999999999999999999999999999988744466677788888999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHH
Q psy4866 367 LFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILC 446 (537)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 446 (537)
+++.+...+.+++++++.................+..+...+++...+..++.++.+.+.+|.+|.+.|+.+.++...+.
T Consensus 361 lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n 440 (513)
T KOG0254|consen 361 LLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVN 440 (513)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHH
Confidence 99999999999999888776554310001223456777888888888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHH-HHHhhccCCCCCCHHHHHHHHhcCcc
Q psy4866 447 TTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTV-YLYYFLLETKGKTFNEIQYMFKYGKN 508 (537)
Q Consensus 447 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (537)
++..++....+..+.+..+....|..++.++.+... +.+++.||+|+++.+|+++...+...
T Consensus 441 ~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~~ 503 (513)
T KOG0254|consen 441 WLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGIK 503 (513)
T ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCCc
Confidence 999888877777776665534567777777777766 77889999999999999887665533
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.2e-42 Score=348.18 Aligned_cols=427 Identities=15% Similarity=0.145 Sum_probs=311.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCC--CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHH
Q psy4866 62 FLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKES--PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLM 139 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 139 (537)
+.++.++++++++.+.++++.+..+.+.|.+..+.. +.+.+..+.+++.+.+.++..++++++|+++||+|||+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 467778888899999999999999999988876210 123455678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh------HHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh
Q psy4866 140 TGPITTASWIIAMYSRS------VLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG 213 (537)
Q Consensus 140 ~~~l~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~ 213 (537)
+.+++.+++++++++++ ++.++++|+++|++.|...+....+++|++|+++|++++++......+|.++++.++
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998876 789999999999999999999999999999999999999999999999998887765
Q ss_pred hh---------------------------hhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHH-HHHHHHHhhcCC
Q psy4866 214 SE---------------------------LSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEG-KAIESLKWLRNK 265 (537)
Q Consensus 214 ~~---------------------------~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~-~a~~~~~~~~~~ 265 (537)
.. .+||+.+.+.++++++..+..+++||||+|+..+++.+ ++.+.+++..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 32 26999999998888887777888999999999988874 466666666543
Q ss_pred ChhhHHHHHHHHHHhhhhcccccchHHhhccc---hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCC-hh---
Q psy4866 266 TADQVQSELQIIKQNTSKNVERTNFREFMGRS---NMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLP-SD--- 338 (537)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 338 (537)
+.++..++.++.++. .+..+.+++++++++ ..++..+......+.....++....|.|.++++.|.+.. +.
T Consensus 252 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~ 329 (502)
T TIGR00887 252 KIEAEPDEVEKASTA--VEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNA 329 (502)
T ss_pred ccccCcccccchhcc--ccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhH
Confidence 221111111111111 111123577776522 111222222222222223344566678888877766422 11
Q ss_pred ---------HHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHH
Q psy4866 339 ---------YISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISL 409 (537)
Q Consensus 339 ---------~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (537)
....+..++.+++.++.++++||+|||+.++.+..+.+++++++....... ..........+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~ 400 (502)
T TIGR00887 330 YEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL---------STHGFLAIYVL 400 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc---------chhHHHHHHHH
Confidence 022334456677888999999999999999888877777766665432110 01111222222
Q ss_pred HHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh----------ccchhhhHhhHHHHH
Q psy4866 410 LGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI----------GMYSNFLFGGVSSLV 479 (537)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------g~~~~~~~~~~~~~~ 479 (537)
....++.+..++.+.+..|.+|++.|+++.|+.+.+++++++++|.+.+.+.+.. ++...+.++++++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 480 (502)
T TIGR00887 401 AQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFL 480 (502)
T ss_pred HHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHH
Confidence 2333345556677788999999999999999999999999999999999998842 344567777777777
Q ss_pred HHHHHHhhccCCCCCCHHHHH
Q psy4866 480 CTVYLYYFLLETKGKTFNEIQ 500 (537)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~ 500 (537)
+.++. +++||+++++++|++
T Consensus 481 ~~i~~-~~lpEt~~~~leei~ 500 (502)
T TIGR00887 481 GILFT-LLIPETKGKSLEELS 500 (502)
T ss_pred HHHHh-eEeccCCCCCHHhhh
Confidence 76654 677999999887664
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.4e-39 Score=329.82 Aligned_cols=430 Identities=27% Similarity=0.415 Sum_probs=323.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCC--------CChhhHHHHHHHHHHhhhhhhhHHhhhhhhh
Q psy4866 62 FLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMS--------PNEGSWVVAIIEIGNYLSPIPAGMLVNRIGR 133 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr 133 (537)
++.+...+++.++.++.+++.....+.+|.+.. +++.+ ..+.+++.+++.++..++++++|+++||+||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr 100 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAF---EFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGR 100 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHH---HHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhh
Confidence 455556667777888889999999999988887 66666 8899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHH
Q psy4866 134 KWSLLMTGPITTASWIIAMYSR---SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTY 210 (537)
Q Consensus 134 r~~l~~~~~l~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~ 210 (537)
|++++++.+++.++.+++.++. +++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++
T Consensus 101 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~ 180 (481)
T TIGR00879 101 KKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAY 180 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999986654 4558999999999999999999999999999999999999999999999999999
Q ss_pred HHh---hh----hhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHH--HHHH--HHH
Q psy4866 211 VLG---SE----LSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQS--ELQI--IKQ 279 (537)
Q Consensus 211 ~l~---~~----~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~--~~~ 279 (537)
.++ .. .+||+.|++.++..++..+..+++||+|+++..+++.+++.+..++..+.+..+... .... ...
T Consensus 181 ~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (481)
T TIGR00879 181 GFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKR 260 (481)
T ss_pred HHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHH
Confidence 998 33 589999999777777777777889999999888887777666655544333211111 0000 001
Q ss_pred hhhhcccccchHHhhcc--chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHh
Q psy4866 280 NTSKNVERTNFREFMGR--SNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPST 356 (537)
Q Consensus 280 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g 356 (537)
..+.+..+..+++.++. ...++.++...+..+...........+.|.++++.+.+. .......+..++.+++.++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 340 (481)
T TIGR00879 261 SIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAI 340 (481)
T ss_pred HHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 11111112223444431 123444555555555555555567778888888877764 334666777888899999999
Q ss_pred hhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccc
Q psy4866 357 YYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKA 436 (537)
Q Consensus 357 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 436 (537)
++.||++||+.+..+.++.+++++++.+...... .. ......+..+....++..+++.+..+....++.|.+|++.|+
T Consensus 341 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 418 (481)
T TIGR00879 341 FLVDRFGRRPLLLIGAAGMAICLFVLGILGASFV-TG-SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRP 418 (481)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHhhccc-CC-cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHH
Confidence 9999999999998887777777666653221111 00 000013334444555556666666677778889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCCCCH
Q psy4866 437 VSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKGKTF 496 (537)
Q Consensus 437 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (537)
++.++.+...++|.+++|.+.+.+.++.|+...|++.+++++++.++.+++.+|+++++.
T Consensus 419 ~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 419 KGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCCh
Confidence 999999999999999999999999999999988999988888888877777777776544
No 7
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.5e-39 Score=327.82 Aligned_cols=388 Identities=16% Similarity=0.197 Sum_probs=292.3
Q ss_pred hhHHhhhcCCCCCCCC---CChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy4866 87 PVLEELLSKESPIPMS---PNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVM 163 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s---~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~ 163 (537)
+..|.+.+ |++++ ..+.+++.+++.++..++.+++|+++||+|||++++++.++.+++.+++++++|++.+++.
T Consensus 110 ~~~~~i~~---e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 186 (505)
T TIGR00898 110 TFSSTIVT---EWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVF 186 (505)
T ss_pred cccccEEE---EecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 56788888 99999 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHHhhcccCC
Q psy4866 164 RTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-SYMNYLTYSLIIPIIFTVTFMFMPES 242 (537)
Q Consensus 164 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-~wr~~~~~~~~~~~~~~~~~~~~~es 242 (537)
|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+ +||+.|++.+++.++..+..+++||+
T Consensus 187 r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~es 266 (505)
T TIGR00898 187 RLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPES 266 (505)
T ss_pred HHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999988664 79999999999888877777889999
Q ss_pred hHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHH--HHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHH
Q psy4866 243 PYFYAIKNQEGKAIESLKWLRNKTADQVQSELQII--KQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSI 320 (537)
Q Consensus 243 p~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (537)
|+|+..+++.+++.+.+++..+.++.....+.... ++....++.+.+++++++++..+...+...+..+.....++.
T Consensus 267 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 345 (505)
T TIGR00898 267 PRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG- 345 (505)
T ss_pred hHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH-
Confidence 99999999999998888776554332211111111 111111112356788887655555444443333322111111
Q ss_pred HHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccc
Q psy4866 321 IAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTS 400 (537)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (537)
.+.+....+. +......+.++..+++.++.+++.||+|||+.+..+.++.+++++++.+.. ....
T Consensus 346 ---~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~----------~~~~ 410 (505)
T TIGR00898 346 ---LVLDLGNLGG--NIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP----------VDLY 410 (505)
T ss_pred ---HhccccccCC--ChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC----------CCch
Confidence 1222222222 334555667788889999999999999999999988888777776655431 1112
Q ss_pred hhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHH
Q psy4866 401 WVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVC 480 (537)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 480 (537)
+......++.+++... ..+..+.+..|.+|++.|++++|+.+....+|++++|.+.+ + +..+...++.+++++.+++
T Consensus 411 ~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~ 487 (505)
T TIGR00898 411 FLRTALAVLGKFGITS-AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLA 487 (505)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHH
Confidence 3333333333333333 33455689999999999999999999999999999999998 4 4446667788888777777
Q ss_pred HHHHHhhccCCCCCCHH
Q psy4866 481 TVYLYYFLLETKGKTFN 497 (537)
Q Consensus 481 ~~~~~~~~~~~~~~~~~ 497 (537)
.++. +++||+++++++
T Consensus 488 ~~~~-~~lpet~~~~l~ 503 (505)
T TIGR00898 488 GILT-LFLPETKGVPLP 503 (505)
T ss_pred HHHH-HcCcCCCCCCCC
Confidence 6655 567888876543
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.7e-37 Score=312.58 Aligned_cols=391 Identities=16% Similarity=0.128 Sum_probs=271.7
Q ss_pred HHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCCh-hhH-----HHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHH
Q psy4866 67 LCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNE-GSW-----VVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMT 140 (537)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~-----~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 140 (537)
+.+...++.+++++|...++...|.+.+ +++.+.++ .++ +.++..+++.++++++|+++||+|||+++.++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 93 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGK---VFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT 93 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 4556678999999999999999999998 77644432 222 25778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHH--------HHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHH
Q psy4866 141 GPITTASWIIAMYSRSVLG--------LYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVL 212 (537)
Q Consensus 141 ~~l~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l 212 (537)
+++++++++++++++|++. ++++|+++|++.|+.++...+++.|++|+++|+++.++...+..+|.++++.+
T Consensus 94 ~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 94 IVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875 88999999999999999999999999999999999999998888888877644
Q ss_pred hh------------hhhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHh
Q psy4866 213 GS------------ELSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQN 280 (537)
Q Consensus 213 ~~------------~~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (537)
.. .++||+.|++.++++++.+++...+||+|+|...+++.++..+ +
T Consensus 174 ~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~----------------------~ 231 (490)
T PRK10642 174 VVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR----------------------E 231 (490)
T ss_pred HHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc----------------------c
Confidence 32 2589999999887776666666778999987543322111000 0
Q ss_pred hhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhh
Q psy4866 281 TSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYY 358 (537)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l 358 (537)
...+..+.++++++++ .++........ .+.....++.+..|.|.+++. .+.+. ..........++.+++.++.|++
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 309 (490)
T PRK10642 232 GLQDGPKVSFKEIATK-HWRSLLTCIGL-VIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLL 309 (490)
T ss_pred cccccccCCHHHHHHH-hHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000113345566643 22222322222 222333466677788998865 35543 23345556677888999999999
Q ss_pred hcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchh
Q psy4866 359 IDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVS 438 (537)
Q Consensus 359 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 438 (537)
+||+|||+.+..+.++..+..+.+.... . ........+..++.+.+.+.... ....+..|.+|++.|+++
T Consensus 310 ~dr~grr~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~g~~~~~~~g-~~~~~~~~~~p~~~Rg~~ 379 (490)
T PRK10642 310 SDRFGRRPFVILGSVALFVLAIPAFILI--N-------SNVIGLIFAGLLMLAVILNCFTG-VMASTLPAMFPTHIRYSA 379 (490)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHH--h-------CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCccchHH
Confidence 9999999988777654443332211111 0 11122222333333333333332 334677899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhhhHhhHHHHHHHHHHHhhccCCCCCC
Q psy4866 439 CAVINILCTTLGLISYKLFFLMDKHIG-MYSNFLFGGVSSLVCTVYLYYFLLETKGKT 495 (537)
Q Consensus 439 ~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (537)
.|+.+....+++.++|.+.+++.+..+ ++.++++..+.++++.+.. ++.||++++.
T Consensus 380 ~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~~pes~~~~ 436 (490)
T PRK10642 380 LAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG-VTMKETANRP 436 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HHhccccCCC
Confidence 998777778888999999999988655 4545555555555554444 4568876543
No 9
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.5e-38 Score=285.11 Aligned_cols=398 Identities=12% Similarity=0.089 Sum_probs=291.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHH
Q psy4866 62 FLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTG 141 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 141 (537)
+.++-+.+.+.++.....+..-.++...|.+.+ +.++|.+|+|++.+++++++.++..+.|.++||.+.|+.+.+++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e---~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gL 101 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIE---DGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHH
Confidence 344555556666677777778888899999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh--hh----
Q psy4866 142 PITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG--SE---- 215 (537)
Q Consensus 142 ~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~--~~---- 215 (537)
++.++.+++++++++.+.+.+.-++.|..+|..+|.+...+..|++++|||+..++++++.++|..+.+++. ..
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999988877 44
Q ss_pred hhHHHHHHHHHHHHHHHH-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhh
Q psy4866 216 LSYMNYLTYSLIIPIIFT-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFM 294 (537)
Q Consensus 216 ~~wr~~~~~~~~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (537)
.+||..|++.++++++.. +.++..+|+|+- ..-.+.++..++..+.. .++++.+.-+.++++
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~Pqs----------------~GLP~ie~~~~d~~e~~-~~~~~~~~ls~~~i~ 244 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDRPQS----------------EGLPPIEEYRGDPLEIY-EEEKENEGLTAWQIF 244 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCCccc----------------cCCCCHHHhhcCchhhh-hhhccCCCccHHHHH
Confidence 389999999999987754 555667888721 00000001111111111 111111112333333
Q ss_pred c-cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCC-CChhHHHHHHHHHHHHHhhhHhhhhccc--CCcHHHH
Q psy4866 295 G-RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETF-LPSDYISILFAIILLVSIFPSTYYIDRA--GRRVLFL 369 (537)
Q Consensus 295 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~ 369 (537)
. .-..++.++...+..+..+..=+.+..|.|.|+.+. +++ .++......+-.++++|++++|+++||+ |||....
T Consensus 245 ~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~ 324 (448)
T COG2271 245 VKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMA 324 (448)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHH
Confidence 2 223334455555555555555778899999998775 444 3566888889999999999999999997 5565544
Q ss_pred HhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHH-
Q psy4866 370 VSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTT- 448 (537)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~- 448 (537)
+.+.+.....++..+. . ++.+.++..+.++++|+.. .+..-+.-..+.|..|++..|++.|+...+.++
T Consensus 325 ~i~~~~i~~~~~~~w~--~-------~~~~~~l~~~~l~~iGf~I-yGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~ 394 (448)
T COG2271 325 LIFMLLITASLVLYWL--A-------PNGSYLLDAILLFIIGFLI-YGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLI 394 (448)
T ss_pred HHHHHHHHHHHHHHHc--C-------CCccHHHHHHHHHHHHHHH-hhHHHHHHHHHhccccHhhccchhchhhhHHHHh
Confidence 4333333322222221 1 1122233333333333332 222233446778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhcc
Q psy4866 449 LGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLL 489 (537)
Q Consensus 449 g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 489 (537)
|.+.+....|++.|.+||...|.++.+.++++.+++.....
T Consensus 395 Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 395 GAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred hHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 88888999999999999999999888888887776655443
No 10
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-36 Score=278.27 Aligned_cols=368 Identities=14% Similarity=0.156 Sum_probs=283.4
Q ss_pred HHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHH
Q psy4866 65 SFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPIT 144 (537)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~ 144 (537)
+..++...++.|..+.+.....+++|++.+ |+++|..+.|++.|+|.++..++.++...+.||+.||++++..+.++
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~---dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAA---DLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 345566778888899999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh----hhhhHHH
Q psy4866 145 TASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG----SELSYMN 220 (537)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~----~~~~wr~ 220 (537)
.++++++++++||+.++++|++.|++.|..++...++..+..|+++|++++++...+..++.++|..++ ..+|||.
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 999999999999999999999999999999999999999999999999999999999888888776555 5579999
Q ss_pred HHHHHHHHHHHHHH-HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchH
Q psy4866 221 YLTYSLIIPIIFTV-TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNM 299 (537)
Q Consensus 221 ~~~~~~~~~~~~~~-~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (537)
.|++.+.++++..+ .+..+| |+- .. .+.+.+.....+.+|++..
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP--~~~----------------~~-----------------~~~~~~~~~~~~~l~~p~v 213 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP--PSE----------------IS-----------------GSLPGPLRTLLRLLRRPGV 213 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--Ccc----------------CC-----------------CCCCcchhHHHHHhcCchH
Confidence 99999999988664 455677 200 00 0000001123344555554
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHH
Q psy4866 300 KAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSL 377 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 377 (537)
+..++...+ .+.+.+...+|+..++++. +++. ...+....++++.++|+.++|++.|| +.|+.+.....+..+
T Consensus 214 ~~~l~~t~l----~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~ 288 (394)
T COG2814 214 LLGLLATFL----FMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLAL 288 (394)
T ss_pred HHHHHHHHH----HHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHH
Confidence 443333333 3344556666666666654 5553 44578888999999999999999999 888888888777777
Q ss_pred HHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHH
Q psy4866 378 FSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLF 457 (537)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 457 (537)
.++.+.+. ..+.+..+...+++++........ ......+. -++.+..+.+++....++|..+|..+.
T Consensus 289 ~~l~l~~~-----------~~~~~~~~~~~~~wg~a~~~~~~~-~~~~~a~~-~p~~~~~a~sl~~aa~nlgia~GA~lG 355 (394)
T COG2814 289 ALLALTFT-----------GASPALALALLFLWGFAFSPALQG-LQTRLARL-APDAADLAGSLNVAAFNLGIALGAALG 355 (394)
T ss_pred HHHHHHHh-----------cchHHHHHHHHHHHHHHhhhhhhH-HHHHhccc-CCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766553 223344444444444443332222 22344442 346789999999999999999999999
Q ss_pred HHHHHhhccchhhhHhhHHHHHHHHHHHhhc
Q psy4866 458 FLMDKHIGMYSNFLFGGVSSLVCTVYLYYFL 488 (537)
Q Consensus 458 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 488 (537)
|.+.|+.|+....++.+.+.+++.++.....
T Consensus 356 G~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 356 GLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888888888777664443
No 11
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=5.3e-44 Score=358.16 Aligned_cols=425 Identities=25% Similarity=0.430 Sum_probs=332.7
Q ss_pred HHHHhhhhhhhhhccchhhHHhhhcCCCCCCCC---------CChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHH
Q psy4866 70 TACIAAFTTGMSFAWSAPVLEELLSKESPIPMS---------PNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMT 140 (537)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s---------~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 140 (537)
++.++.+.+|++.+..+...+...... ++..+ +.+.+++.++..+|..+|++++|+++||+|||++++++
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~ 82 (451)
T PF00083_consen 4 IASLGGFLFGYDLGLIGSFASLLGFLQ-FFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIIS 82 (451)
T ss_pred eeHHHHHHHHHHHHHHhhHHhhhhhhh-ccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 345667889999988877766555211 12222 23468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh---hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-
Q psy4866 141 GPITTASWIIAMYSR---SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL- 216 (537)
Q Consensus 141 ~~l~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~- 216 (537)
.++..+++++.++++ |++.+.++|+++|++.|+..+....++.|..|+++|++..++.+.++.+|.+++..++..+
T Consensus 83 ~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~ 162 (451)
T PF00083_consen 83 ALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVS 162 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999887776432
Q ss_pred ---h---HHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhh-cccccc
Q psy4866 217 ---S---YMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSK-NVERTN 289 (537)
Q Consensus 217 ---~---wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 289 (537)
+ ||..+++.++++++..+..+++||||+|+..++|.+||++.++++++.+.. +++.++..+..++ ++.+.+
T Consensus 163 ~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 240 (451)
T PF00083_consen 163 YYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIE--DEEIEEIKAEKKESQESKAS 240 (451)
T ss_pred cccccccccccccccccccccccccccccccccceecccccccccccccccccccccc--ccccccccccccccccccee
Confidence 4 999999999999888888889999999999999999999999997655321 1222222111111 111356
Q ss_pred hHHhhcc-chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHH
Q psy4866 290 FREFMGR-SNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLF 368 (537)
Q Consensus 290 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 368 (537)
+++++++ ..+++..+...+..+..+.+.+....|.+.+++..+.+.+ .....+..+..+++.+++.++.||+|||+++
T Consensus 241 ~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~ 319 (451)
T PF00083_consen 241 WRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRRKLL 319 (451)
T ss_pred eeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 7777774 3356666666777777677777788888888877766533 3444556677788888888999999999999
Q ss_pred HHhhHHHHHHHHHHHH-HHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHH
Q psy4866 369 LVSSAGCSLFSFIAGL-YYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCT 447 (537)
Q Consensus 369 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 447 (537)
+.+..+.+++.+.++. ...... . +.......+....+....++.++.++.+.+..|.+|++.|+++.|+...+++
T Consensus 320 i~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~ 395 (451)
T PF00083_consen 320 IIGLLLMAICSLILGIIFFLGVS---S-SSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGR 395 (451)
T ss_pred ccccccccccccccccccccccc---c-ccccccccceeeeecccccccccccccccccccccccccccccccccccccc
Confidence 9998888887776651 111111 0 0011333344444455566667788888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCCCCHHHHHHH
Q psy4866 448 TLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKGKTFNEIQYM 502 (537)
Q Consensus 448 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (537)
+++++++.+...+.+..+....+.+.++++++..++.++++|||++++++|++++
T Consensus 396 i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 396 IGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred ccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 9999999999988888775667888888888888888899999999999998775
No 12
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=6.2e-36 Score=294.34 Aligned_cols=385 Identities=14% Similarity=0.111 Sum_probs=268.9
Q ss_pred HHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHH
Q psy4866 64 FSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPI 143 (537)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l 143 (537)
+|.+.++++++.+++.++....+...|.+.+ |+|++..+.|++.+++.+++++++++.|+++||+|||+++..++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGK---DLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHh---hcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 4556666777778888899999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh--------
Q psy4866 144 TTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE-------- 215 (537)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-------- 215 (537)
++++++++++++|++.+++.|+++|++.+...+....++.|++|+++|+++++++..+..+|.++++.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999888754
Q ss_pred --hhHHHHHHHHHHHHHHHH-HHhhcccCChH---HHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccc
Q psy4866 216 --LSYMNYLTYSLIIPIIFT-VTFMFMPESPY---FYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTN 289 (537)
Q Consensus 216 --~~wr~~~~~~~~~~~~~~-~~~~~~~esp~---~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (537)
.+||+.|++.++++++.. +.++++||+|+ |+.++ +.+...+..+....+....+ +..+ ......+..
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~ 235 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEE----DKKALKEMIDNDQLTLEQPE-GAFA--HAAMPQRSM 235 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHH----HHHHHHHHHHhccccccccc-cccc--cccccHHHH
Confidence 389999999888876644 45567899984 22111 11111111110000000000 0000 000000112
Q ss_pred hHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC--CC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCcH
Q psy4866 290 FREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSE--TF-LPSDYISILFAIILLVSIFPSTYYIDRAGRRV 366 (537)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 366 (537)
++++++ + .++...+.+++.....+.+..|+|.++++.+ .+ ...........++.+++.++.|+++||+++|+
T Consensus 236 ~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 236 LREIFT-P----AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK 310 (412)
T ss_pred HHHhcC-h----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH
Confidence 233332 1 2333444444455557778889999998743 33 23445677788899999999999999999777
Q ss_pred HH-HHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHH
Q psy4866 367 LF-LVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINIL 445 (537)
Q Consensus 367 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 445 (537)
.. ....++..++. ++... .......+....+...+... ..+..+....|.+|++.|+++.|+.+..
T Consensus 311 ~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~a~g~~~~~ 377 (412)
T TIGR02332 311 HHTALPYLFAAAGW-LLASA-----------TDHNLIQLLGIIMASMGSFS-AMAIFWTTPDQSISLQARAIAIAVINAT 377 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHh-----------cCCHHHHHHHHHHHHHHhhh-hhhHHHhhcccccchHHHHHHHHHHHHh
Confidence 53 33333333322 22111 01111111122222222211 1233335556789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc-cchhhhHhhHH
Q psy4866 446 CTTLGLISYKLFFLMDKHIG-MYSNFLFGGVS 476 (537)
Q Consensus 446 ~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~ 476 (537)
+++|++++|.+.|.+.+..| |...+.+.+++
T Consensus 378 ~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 378 GNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 99999999999999999875 77666655443
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.3e-35 Score=292.80 Aligned_cols=392 Identities=12% Similarity=0.089 Sum_probs=269.3
Q ss_pred HHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHH
Q psy4866 65 SFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPIT 144 (537)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~ 144 (537)
+.+.....++.+...++....+..+|.+.+ ++|+|..+.|++.+++.+++.+++++.|+++||+|||+++.++.++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNAAMPEMLA---DLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 344444556666666777777888999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHH
Q psy4866 145 TASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMN 220 (537)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~ 220 (537)
+++.+++++++|++.+++.|++.|++.|..++...+++.|++|+++|++++++.+.+..+|.++++.+++. ++||+
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~ 178 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRY 178 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 48999
Q ss_pred HHHHHHHHHHHH-HHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHh-----h
Q psy4866 221 YLTYSLIIPIIF-TVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREF-----M 294 (537)
Q Consensus 221 ~~~~~~~~~~~~-~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 294 (537)
.|++.+++.++. ++..++++|+|++.......++ ++ +.. +..+ +.++.+.+.++. +
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~--------~~----~~~----~~~~--~~~~~~~~~~~~~~~~~~ 240 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEW--------RH----DAL----ELAQ--QQEGAGLSRKEILTKYVL 240 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccc--------cc----ccc----ccch--hccccCCChhhhHHHHHh
Confidence 999988876654 3445567888743210000000 00 000 0000 000001122222 2
Q ss_pred ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhccc--CCcHHH-H
Q psy4866 295 GRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRA--GRRVLF-L 369 (537)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~-~ 369 (537)
+++. ++...+..+........+..|.|.++.+ .+.+. .+........++.++++++.|+++||+ ++|+.. .
T Consensus 241 ~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~ 316 (434)
T PRK11663 241 LNPY----IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNL 316 (434)
T ss_pred cChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHH
Confidence 2222 2222222222333345666788888854 45552 344667778889999999999999998 333332 2
Q ss_pred HhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHH
Q psy4866 370 VSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTL 449 (537)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 449 (537)
...+...+....+.... ...........+.++.+ ..+..........|.+|++.|+++.|+.+...++|
T Consensus 317 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 385 (434)
T PRK11663 317 IFAAGILLSVGSLWLMP----------FASYVMQAACFFTIGFF-VFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG 385 (434)
T ss_pred HHHHHHHHHHHHHHHcc----------cccHHHHHHHHHHHHHH-HhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHH
Confidence 22222222221111110 01111111222222221 11111222356689999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 450 GLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 450 ~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
.+++|.+.|++.|..|+...|.+.+++++++.+..+.+.++++
T Consensus 386 ~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 428 (434)
T PRK11663 386 AALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQA 428 (434)
T ss_pred HHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999998898888888877766655544433
No 14
>KOG0253|consensus
Probab=100.00 E-value=2.2e-35 Score=262.26 Aligned_cols=413 Identities=16% Similarity=0.187 Sum_probs=317.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHH
Q psy4866 62 FLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTG 141 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 141 (537)
+.+|...+...++...+.+.....+-+.|.+.. .++.+..|..++......|..+++..+|.++|++|||+.+.+..
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~---~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDE---VWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHh---hhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 355666666667776666666666777788887 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hh
Q psy4866 142 PITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LS 217 (537)
Q Consensus 142 ~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~ 217 (537)
+...+..++.+.++|+..+.+.|.+.|+|.|+ .|...++-.|..|..+|+..+-.. ..+.+|.++...+... +|
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g 228 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG 228 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999 788888999999999998887777 8899999988877654 59
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhH---------HHHHHHH----HHh-hh-
Q psy4866 218 YMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQV---------QSELQII----KQN-TS- 282 (537)
Q Consensus 218 wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~----~~~-~~- 282 (537)
|||.+.....+..++....+++||||||+..+|++++|.+.++++.+.|+... ..+.++. .+. .+
T Consensus 229 wr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a 308 (528)
T KOG0253|consen 229 WRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSA 308 (528)
T ss_pred HHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcc
Confidence 99999998877777778888999999999999999999999998877654221 1111111 111 11
Q ss_pred hcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC---C-----------------CC-ChhHHH
Q psy4866 283 KNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSE---T-----------------FL-PSDYIS 341 (537)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------------~~-~~~~~~ 341 (537)
.++.+....+++.++.++..++....++...+. ++........+++... . +. ....-.
T Consensus 309 ~ke~rg~~~nLlsp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdl 387 (528)
T KOG0253|consen 309 AKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDL 387 (528)
T ss_pred ccccccchHhhcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHH
Confidence 122266778888877888777776666655444 3333333333333321 0 00 111335
Q ss_pred HHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccc
Q psy4866 342 ILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPL 421 (537)
Q Consensus 342 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (537)
.+..+..+.|.++.+++.||+|||+.+...++++++..+++... .......+..+..-.+.+.++ .+
T Consensus 388 litslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c------------~~rn~~tvllf~arafisg~f-qv 454 (528)
T KOG0253|consen 388 LITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTC------------KTRNAYTVLLFTARAFISGAF-QV 454 (528)
T ss_pred HHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh------------cCcchhHHHHHHHHHHHhchh-eE
Confidence 56788899999999999999999999999999888887776553 223334444455555555555 45
Q ss_pred hhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCCCC
Q psy4866 422 FTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKGKT 495 (537)
Q Consensus 422 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (537)
.++|..|++|+..|+++.|.+.....+|+++.|.+. +........+..+++++++++.+...++--|+|+|.
T Consensus 455 aYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 455 AYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred EEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 679999999999999999999999999999999988 444445566777888888888888767777888875
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.8e-35 Score=292.98 Aligned_cols=369 Identities=16% Similarity=0.179 Sum_probs=268.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHH
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGP 142 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 142 (537)
.++...+.+.++.+.++++.....+.+|.+.+ ++|+|+.+.+++.+++.++..++++++|+++||+|||++++++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~ 91 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKA---DLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 33444566777888899999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhH
Q psy4866 143 ITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSY 218 (537)
Q Consensus 143 l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~w 218 (537)
+.++++++++++++++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++++.+... .+|
T Consensus 92 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 92 AYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999877654 589
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccch
Q psy4866 219 MNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSN 298 (537)
Q Consensus 219 r~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (537)
|+.|++..+..++........||++++..++.+. .+ ++. .......+..++++++++.
T Consensus 172 ~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~------------~~-~~~---------~~~~~~~~~~~~~~~~~~~ 229 (426)
T PRK12307 172 RAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSG------------KG-KHS---------QSAWSVFSLSMKGLFNRAQ 229 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhc------------cc-ccc---------ccchhhhhHHHHHHHhhch
Confidence 9999986554444333333457765442211000 00 000 0000000123456666544
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHH
Q psy4866 299 MKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSL 377 (537)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 377 (537)
.+.........+ ..+.....+..++|.++++.+.+. .......+..++.+++.++.+++.||++||+.+..+.++..+
T Consensus 230 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 308 (426)
T PRK12307 230 FPLTLCVFIVLF-SIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 443333222222 222223345667888888776642 234556667888999999999999999999988877766655
Q ss_pred HHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHH-hhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHH
Q psy4866 378 FSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFF-NLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKL 456 (537)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 456 (537)
..+.+... ..... ..+...+++.++ ..+..+....++.|.+|++.||+++|+.+...++++.++|.+
T Consensus 309 ~~~~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~ 376 (426)
T PRK12307 309 FIFPLFRI-----------PQDNY-LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMA 376 (426)
T ss_pred HHHHHHHH-----------ccccH-HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHH
Confidence 54433321 01111 122222333222 122333444778899999999999999999999999999999
Q ss_pred HHHHHHhhccchh
Q psy4866 457 FFLMDKHIGMYSN 469 (537)
Q Consensus 457 ~g~l~~~~g~~~~ 469 (537)
.|++.+..|+...
T Consensus 377 ~g~l~~~~g~~~~ 389 (426)
T PRK12307 377 ATWLGITMGLGAA 389 (426)
T ss_pred HHHHHHcccHHHH
Confidence 9999998886543
No 16
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.2e-35 Score=295.89 Aligned_cols=390 Identities=13% Similarity=0.058 Sum_probs=266.9
Q ss_pred HHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHH
Q psy4866 64 FSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPI 143 (537)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l 143 (537)
.+.+.....++.+...++...+++..|.+.+ |+|++..+.|++.+++.+++++++++.|+++||+|||+++.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~ 103 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMIS---TYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHH
Confidence 4445555666666677788888899999999 9999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHH-----HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh---
Q psy4866 144 TTASWIIAMY-----SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE--- 215 (537)
Q Consensus 144 ~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~--- 215 (537)
.+++.++.++ ++|++.+++.|+++|++.+...+...++++||+|+++||++++++..+.++|.++++.+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 104 SAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 8777766665 58999999999999999999999999999999999999999999999999999998877643
Q ss_pred -h---hHHHHHHHHHHHHHHHH-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhccc-ccc
Q psy4866 216 -L---SYMNYLTYSLIIPIIFT-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVE-RTN 289 (537)
Q Consensus 216 -~---~wr~~~~~~~~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 289 (537)
+ +||..|.+.++++++.. +.+++.+++|+.. +..++ ++ ...+.. .+ + + +....++.. ...
T Consensus 184 ~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~~-~~---~~~~~~-~~--~---~-~~~~~~~~~~~~~ 249 (467)
T PRK09556 184 YFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGKA-EE---IFGEPI-SE--E---D-KETESTDMTKWQI 249 (467)
T ss_pred hhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCCh-hh---cccCcc-ch--h---h-hccccccCcHHHH
Confidence 1 58888888787776644 3444567776321 00000 00 000000 00 0 0 000000000 000
Q ss_pred h-HHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcH
Q psy4866 290 F-REFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRV 366 (537)
Q Consensus 290 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 366 (537)
+ +..++++.. +...+..++..........|.|.|+++ .+.+. ++........++.+++.++.|+++||+++|+
T Consensus 250 ~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~ 325 (467)
T PRK09556 250 FVEYVLKNPVI----WLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR 325 (467)
T ss_pred HHHHHHcChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 1 123443333 333333333333455677889988865 45553 3446666778889999999999999999988
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHH
Q psy4866 367 LFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILC 446 (537)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 446 (537)
.......+..++...+... . ..+.+...+..++++.+. .+..........|.+|++.+|++.|+.+..+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g 394 (467)
T PRK09556 326 ALVACIALALIIFTLGVYQ---H-------ATSEYMYLASLFALGFLV-FGPQLLIGVAAVGFVPKKAIGVANGIKGTFA 394 (467)
T ss_pred hHHHHHHHHHHHHHHHHHH---h-------cCcHHHHHHHHHHHHHHH-hhHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Confidence 7665544333322222111 0 112222223333333222 1111122256679999999999999999999
Q ss_pred HH-HHHHHHHHHHHHHH------------hhccchhhhHhhHHHHHHHHHHH
Q psy4866 447 TT-LGLISYKLFFLMDK------------HIGMYSNFLFGGVSSLVCTVYLY 485 (537)
Q Consensus 447 ~~-g~~~~~~~~g~l~~------------~~g~~~~~~~~~~~~~~~~~~~~ 485 (537)
++ |.+++|.+.|.+.| ..||...|.+..++++++.+..+
T Consensus 395 ~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 395 YLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 97 77999999999999 56788888888777777765544
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=8.5e-35 Score=287.56 Aligned_cols=374 Identities=14% Similarity=0.132 Sum_probs=276.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHH
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGP 142 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 142 (537)
++|.+..++.+..+.++++....++..|.+.+ ++|.++.+.+++.+++.++..+++++.|+++||+|||+++.++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQ---EFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 67778888888899999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhH
Q psy4866 143 ITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSY 218 (537)
Q Consensus 143 l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~w 218 (537)
+..++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|..+++.++.. .+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888754 489
Q ss_pred HHHHHHHHHHHHHHH-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccc
Q psy4866 219 MNYLTYSLIIPIIFT-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRS 297 (537)
Q Consensus 219 r~~~~~~~~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (537)
|+.|++.+++.++.. +...++||+|++..++.+.++ + +...+..+++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------------~---------------~~~~~~~~~~~ 217 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQ----------------R---------------APVLRALFGEG 217 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchh----------------h---------------hhhHHHHhhhh
Confidence 999998877665544 445568998754322111000 0 00001111111
Q ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHH
Q psy4866 298 NMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCS 376 (537)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 376 (537)
..+.. .......+......+....|.|.++++.+.+. ..+.......++.+++.++.|++.||+++|+.+..+.+...
T Consensus 218 ~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 296 (406)
T PRK11551 218 RATAT-LLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGIL 296 (406)
T ss_pred hhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 11111 11111112222234556677888888877653 44566777788999999999999999999998877665555
Q ss_pred HHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHH
Q psy4866 377 LFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKL 456 (537)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 456 (537)
++.+.+... ...+...+..++.+.+.. +..+...++..|.+|++.|+++.|+.+...++|.+++|.+
T Consensus 297 ~~~~~~~~~------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~ 363 (406)
T PRK11551 297 ASLAALAAA------------PSFAGMLLAGFAAGLFVV-GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLL 363 (406)
T ss_pred HHHHHHHhc------------CcHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhh
Confidence 554444321 122223333333443332 2345556888999999999999999999999999999999
Q ss_pred HHHHHHhhccch-hhhHhhHHHHHHHHHH
Q psy4866 457 FFLMDKHIGMYS-NFLFGGVSSLVCTVYL 484 (537)
Q Consensus 457 ~g~l~~~~g~~~-~~~~~~~~~~~~~~~~ 484 (537)
.|.+.+..+... .+.....+.+++.++.
T Consensus 364 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 364 AGQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HhhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 999998755443 3334444444444433
No 18
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.8e-34 Score=283.14 Aligned_cols=367 Identities=13% Similarity=0.106 Sum_probs=265.8
Q ss_pred HHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHH
Q psy4866 64 FSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPI 143 (537)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l 143 (537)
+|.....+.++.+..........+.+|.+.+ ++|.|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~---~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 83 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQ---SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVL 83 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHh---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 3333444444445544444456677899999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHH
Q psy4866 144 TTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYM 219 (537)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr 219 (537)
.+++++++++++|++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|.+++. ++||
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~ 163 (390)
T PRK03545 84 FIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999888754 5999
Q ss_pred HHHHHHHHHHHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccch
Q psy4866 220 NYLTYSLIIPIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSN 298 (537)
Q Consensus 220 ~~~~~~~~~~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (537)
+.|++.++++++..+. ...+||.|+ ++ . + .....++.++++.
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~-----~~--------------~--~----------------~~~~~~~~~~~~~ 206 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPS-----EH--------------S--G----------------SLKSLPLLFRRPA 206 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCC-----CC--------------c--c----------------hHHHHHHHHhCcH
Confidence 9999998887665433 344565531 00 0 0 0011234454444
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHH
Q psy4866 299 MKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCS 376 (537)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 376 (537)
.+......++.... ......+.+.++++ .+.+. ..+....+..++.++++++.+++.||+++|... .+..+..
T Consensus 207 ~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~ 281 (390)
T PRK03545 207 LVSLYLLTVVVVTA----HFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLL 281 (390)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHH
Confidence 33322222222211 22334455555554 35543 344666777889999999999999999987654 3433333
Q ss_pred HHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHH
Q psy4866 377 LFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKL 456 (537)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 456 (537)
++...+... ..+.+...+...+.+.+... ..+.....+.+..| +.+++++|+.+...++|..+||.+
T Consensus 282 ~~~~~l~~~-----------~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~ 348 (390)
T PRK03545 282 VCLLLLLPA-----------ANSEWHLSVLSIFWGIAIMC-IGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALL 348 (390)
T ss_pred HHHHHHHHH-----------hchHHHHHHHHHHHHHHHhc-chHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332221 12223334444445554432 33334466677766 578999999999999999999999
Q ss_pred HHHHHHhhccchhhhHhhHHHHHHHHHHHhhc
Q psy4866 457 FFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFL 488 (537)
Q Consensus 457 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 488 (537)
.|.+.+..|++..+.+.+++.+++.++.+...
T Consensus 349 ~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 349 GNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999888888888877765554
No 19
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.6e-34 Score=293.36 Aligned_cols=403 Identities=13% Similarity=0.096 Sum_probs=272.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHH
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGP 142 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 142 (537)
.+|.....+.++.++++++.....+.+|.+.+ ++|+|..+.+++.+.+.++..++.++.|+++||+|||++++++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 93 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQG---EFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 34445666777788888999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhH
Q psy4866 143 ITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSY 218 (537)
Q Consensus 143 l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~w 218 (537)
+.+++.+++++++|++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+++. ++|
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888765 489
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHH----hhhhcccccchH---
Q psy4866 219 MNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQ----NTSKNVERTNFR--- 291 (537)
Q Consensus 219 r~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--- 291 (537)
|+.|++.++..++.++....+||++++..++++.++..+..+.....+............. ..........+.
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAV 253 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHH
Confidence 9999886655555545555678887653322221111111111111110000000000000 000000000000
Q ss_pred ----------Hh-hc-cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-hcCCCC-ChhHHHHHHHHHHHHHhhhHhh
Q psy4866 292 ----------EF-MG-RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFA-SSETFL-PSDYISILFAIILLVSIFPSTY 357 (537)
Q Consensus 292 ----------~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~g~ 357 (537)
.. .+ +..+++.........+..+........++|.+++ ..+.+. ..+.......++.+++.++.|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~ 333 (496)
T PRK03893 254 LGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGF 333 (496)
T ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0111111111111111111112234567788885 555553 4456777788899999999999
Q ss_pred hhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccch
Q psy4866 358 YIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAV 437 (537)
Q Consensus 358 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 437 (537)
+.||+++|+.+..+..+..+..+.+... ............+...+.+.+..+....++.|.+|++.|++
T Consensus 334 l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 402 (496)
T PRK03893 334 LGDWLGTRKAYVCSLLISQLLIIPVFAI-----------GGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAA 402 (496)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHhhc-----------cccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhc
Confidence 9999999998887765555444333221 01111222222222222223334455578889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHH
Q psy4866 438 SCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLV 479 (537)
Q Consensus 438 ~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 479 (537)
++|+.+....+|+.++|.+.|.+.+..|+...+...++.+.+
T Consensus 403 ~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 403 GLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999988776555544433
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.1e-34 Score=285.23 Aligned_cols=382 Identities=14% Similarity=0.109 Sum_probs=271.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHH
Q psy4866 62 FLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTG 141 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 141 (537)
+++|.....+.++.+.++++....+++.|.+.+ ++|.+..+.+++.+++.++..+++++.|+++||+|||++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~ 84 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAG---EFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSI 84 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 456667777888899999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----h
Q psy4866 142 PITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL----S 217 (537)
Q Consensus 142 ~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~ 217 (537)
++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.++..+ +
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 85 VLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998887652 4
Q ss_pred --HHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhc
Q psy4866 218 --YMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMG 295 (537)
Q Consensus 218 --wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (537)
||+.|++.++..++..+....+||++++...+++.++..+..++..+... ..+...+ ......++.
T Consensus 165 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~-- 232 (405)
T TIGR00891 165 DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEH-RIANIVM---------TLAAAMVQS-- 232 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccch-hhhhhhh---------hhhHHhhhh--
Confidence 99999987777666666667789987664333222222111111111100 0000000 000011111
Q ss_pred cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhH
Q psy4866 296 RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSA 373 (537)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 373 (537)
....+......................+.|.++.+ .+.+. +.+.......++.+++.++.+++.||++||+.+..+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~ 312 (405)
T TIGR00891 233 AGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLL 312 (405)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHH
Confidence 11111111111111111111233444566766654 35542 34456677888999999999999999999998877766
Q ss_pred HHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHH
Q psy4866 374 GCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLIS 453 (537)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 453 (537)
+..+..+.+... ....+...+..++.+.+.. +..++...++.|.+|++.|++++|+.+.+.++|..++
T Consensus 313 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g 380 (405)
T TIGR00891 313 AGQLLIIPVFAI-----------GANVAVLGLGLFFQQMLVQ-GIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALA 380 (405)
T ss_pred HHHHHHHHHHHh-----------CCchHHHHHHHHHHHHHHc-cchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHH
Confidence 543332222111 1122222333233333333 3334555788999999999999999999999999999
Q ss_pred HHHHHHHHHhhc-cchhh
Q psy4866 454 YKLFFLMDKHIG-MYSNF 470 (537)
Q Consensus 454 ~~~~g~l~~~~g-~~~~~ 470 (537)
|.+.|.+.|..| |...+
T Consensus 381 ~~~~g~l~~~~g~~~~~~ 398 (405)
T TIGR00891 381 PIIGALLAQRLDEYGTAL 398 (405)
T ss_pred HHHHHHHHHhccccchhH
Confidence 999999999988 65443
No 21
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.3e-34 Score=284.54 Aligned_cols=371 Identities=13% Similarity=0.087 Sum_probs=249.1
Q ss_pred HHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCC---CCCChhhHH---HHHHHHHHhhhhhhhHHhhhhhhhhHHH
Q psy4866 64 FSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIP---MSPNEGSWV---VAIIEIGNYLSPIPAGMLVNRIGRKWSL 137 (537)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~---~s~~~~~~~~~~~~~G~l~dr~Grr~~l 137 (537)
++..+...+++.+++.++...++...|.+.+ +++ .+..+.+.. .+..+++..++++++|+++||+|||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l 96 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAH---IFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM 96 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 4445566678888999999999999999999 774 445544444 4444555569999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHH--------HHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHH
Q psy4866 138 LMTGPITTASWIIAMYSRSVL--------GLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYT 209 (537)
Q Consensus 138 ~~~~~l~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~ 209 (537)
.++.++++++++++++++++. .++++|+++|++.|+.++...+++.|++|+++|+++.++...+...|.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 97 LISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999998874 588999999999999999999999999999999999999888888888877
Q ss_pred HHHhh------------hhhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHH
Q psy4866 210 YVLGS------------ELSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQII 277 (537)
Q Consensus 210 ~~l~~------------~~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 277 (537)
+.+.. .++||+.|++.++++++.......+||+|++..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~----------------------------- 227 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETR----------------------------- 227 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHh-----------------------------
Confidence 65432 3589999999888887766666667888642100
Q ss_pred HHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhH
Q psy4866 278 KQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPS 355 (537)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 355 (537)
+. +++.+++++++++..+...+ ...+.....++.+..|+|.++.+ .+.+. +......+..+...++.++.
T Consensus 228 -~~----~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~ 299 (432)
T PRK10406 228 -AL----KEAGSLKGLWRNRRAFIMVL---GFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLI 299 (432)
T ss_pred -hh----cccccHHHHHhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00223555665332222111 11222223355677788988865 35542 23345555566777888889
Q ss_pred hhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCcccc
Q psy4866 356 TYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMK 435 (537)
Q Consensus 356 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 435 (537)
|+++||++||+.+....++..+....+.... .. .......+....+.....+. ..+..+.+..|.+|++.|
T Consensus 300 G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~fp~~~r 370 (432)
T PRK10406 300 GALSDKIGRRTSMLCFGSLAALFTVPILSAL--QN------VSSPYAAFGLVMCALLIVSF-YTSISGILKAEMFPAQVR 370 (432)
T ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHHHH--Hc------CCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCcc
Confidence 9999999999887766554433332221111 00 01112111111111122222 223345788999999999
Q ss_pred chhhHHHHHHHHH-HHHHHHHHHHHHHHhhccch-hhhHhhHHHHHHHHHH
Q psy4866 436 AVSCAVINILCTT-LGLISYKLFFLMDKHIGMYS-NFLFGGVSSLVCTVYL 484 (537)
Q Consensus 436 ~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g~~~-~~~~~~~~~~~~~~~~ 484 (537)
++++|+.+..+++ .+...|.+.+.+ +..|.+. .+++.++..+++.+..
T Consensus 371 ~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 371 ALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred chhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999988765 344577777754 5556443 4444445555554444
No 22
>KOG0252|consensus
Probab=100.00 E-value=3.2e-36 Score=276.21 Aligned_cols=429 Identities=16% Similarity=0.130 Sum_probs=315.4
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCC-----CCCChhhHHHHHHHHHHhhhhhhhHHhhhhh
Q psy4866 57 LHTVLFLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIP-----MSPNEGSWVVAIIEIGNYLSPIPAGMLVNRI 131 (537)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~ 131 (537)
.....|+....+.++.++.|+++|+...++.+.|.+...+++-. .++...+.+..+..+|..+|+++.|++.||+
T Consensus 32 ~~g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~ 111 (538)
T KOG0252|consen 32 SEGLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF 111 (538)
T ss_pred ccchhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34556788889999999999999999999999988877544222 4556778999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHh-------hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHH
Q psy4866 132 GRKWSLLMTGPITTASWIIAMYSR-------SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHL 204 (537)
Q Consensus 132 Grr~~l~~~~~l~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 204 (537)
|||+++...++++.+++++++++. -.+++.+.|++.|+|.|+-+|...+..+|...+++||...+...+..++
T Consensus 112 GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~ 191 (538)
T KOG0252|consen 112 GRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGF 191 (538)
T ss_pred cchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecch
Confidence 999999999999999999888754 2477889999999999999999999999999999999999888777777
Q ss_pred HHHHHHHHhhhh-------------------hHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhC-CHHHHHHHHHhhcC
Q psy4866 205 GILYTYVLGSEL-------------------SYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKN-QEGKAIESLKWLRN 264 (537)
Q Consensus 205 G~~i~~~l~~~~-------------------~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~-~~~~a~~~~~~~~~ 264 (537)
|.+.|.+++-.+ -||..+.+.++++++.+...+.+|||++|-.... +.+.|. ....+
T Consensus 192 GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k 268 (538)
T KOG0252|consen 192 GILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDMKK 268 (538)
T ss_pred hHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hcccc
Confidence 777665554321 3999999999999998888899999999864333 233332 22222
Q ss_pred CChhhHHHHHHHHHHhhhhc-ccccc---hHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCChh--
Q psy4866 265 KTADQVQSELQIIKQNTSKN-VERTN---FREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPSD-- 338 (537)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 338 (537)
....+ .+..+...... ..+.+ +...+..+.-+ .++......+..-..++....+...+++..+......
T Consensus 269 ~~~~~----~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~-~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~ 343 (538)
T KOG0252|consen 269 VLSVD----IEAESTAESDVPPPSNSFGLFSRLFLRWHGK-HLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY 343 (538)
T ss_pred ccccc----cchhhccccCCCCcccccchHHHHHHHHHHH-HHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH
Confidence 11111 11111111111 11222 22222222222 3333444444444446677777788887665542111
Q ss_pred --------HHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHH
Q psy4866 339 --------YISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLL 410 (537)
Q Consensus 339 --------~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (537)
....+.....++|..+..+++|++|||+..+.+++++.+..+.++..+.. ........+...+.
T Consensus 344 ~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~--------~~~~~Gf~v~y~l~ 415 (538)
T KOG0252|consen 344 HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ--------LENTIGFVVLYSLT 415 (538)
T ss_pred HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc--------ccccCceeehHHHH
Confidence 11222333444577778889999999999999999999988888764321 11223344555556
Q ss_pred HHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH-----hhccchhhhHhhHHHHHHHHHHH
Q psy4866 411 GVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK-----HIGMYSNFLFGGVSSLVCTVYLY 485 (537)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~ 485 (537)
.++..++-+...+.+.+|.+|++.|++..|+....+-.|++++...+.++.+ ..|....+++++++++++.++.
T Consensus 416 ~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T- 494 (538)
T KOG0252|consen 416 FFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT- 494 (538)
T ss_pred HHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee-
Confidence 6666777777778899999999999999999999999999999999999999 7788899999999999988776
Q ss_pred hhccCCCCCCHHHHHHH
Q psy4866 486 YFLLETKGKTFNEIQYM 502 (537)
Q Consensus 486 ~~~~~~~~~~~~~~~~~ 502 (537)
+++||+++++++|++++
T Consensus 495 ~l~pEtk~~~leei~~e 511 (538)
T KOG0252|consen 495 LLIPETKGKSLEEISNE 511 (538)
T ss_pred EEeecccccCHHHhcCh
Confidence 56779999999888443
No 23
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=6.5e-34 Score=278.63 Aligned_cols=372 Identities=11% Similarity=0.028 Sum_probs=265.4
Q ss_pred HHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHH
Q psy4866 64 FSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPI 143 (537)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l 143 (537)
.|......+.+.+.... ....++.+|.+++ |+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~---~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l 83 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPL-LTSVGPLLPQLRQ---ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLL 83 (393)
T ss_pred HHHHHHHHHHHHHcchh-hhccchhHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHH
Confidence 34444445555444333 3567899999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh-----hhH
Q psy4866 144 TTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE-----LSY 218 (537)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-----~~w 218 (537)
++++.+++++++|++.++++|+++|++.+...+....++.+++| ++|+++++++..+..+|..+++.++.. .+|
T Consensus 84 ~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w 162 (393)
T PRK09705 84 IAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETW 162 (393)
T ss_pred HHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 99999999999999999999999999999999999999999997 779999999988887777777766654 279
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-cCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccc
Q psy4866 219 MNYLTYSLIIPIIFTVTFMFM-PESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRS 297 (537)
Q Consensus 219 r~~~~~~~~~~~~~~~~~~~~-~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (537)
|+.+.+.++..++..+.++.. ++.|+ . + +++ +...++.++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~--~------------~~~--~~~~~~~l~~~ 205 (393)
T PRK09705 163 YQTLAWWALPAVVALFAWWWQSAREVA---------------------S--S------------HKT--TTTPVRVVFTP 205 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCc---------------------c--c------------cCC--CcCCcccccCH
Confidence 998877666554433333222 11110 0 0 000 00112222222
Q ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHH
Q psy4866 298 NMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCS 376 (537)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 376 (537)
..+...+ ..+....++.....|.|.++++.+.+. ..+....+.+++.++++++.+++.||+++|+....+..+..
T Consensus 206 ~~~~l~~----~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~ 281 (393)
T PRK09705 206 RAWTLGV----YFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQL 281 (393)
T ss_pred hHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHH
Confidence 2222222 222223345567778888888876653 35577788899999999999999999999998888877666
Q ss_pred HHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccC-CccccchhhHHHHHHHHHHHHHHHH
Q psy4866 377 LFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYF-SSNMKAVSCAVINILCTTLGLISYK 455 (537)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~ 455 (537)
++..++... +..... ....+.+.+.+... +.......+.. |++.+++..|+.+...++++.++|.
T Consensus 282 ~~~~~~~~~-----------~~~~~~--~~~~l~g~g~g~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~ 347 (393)
T PRK09705 282 VGFCGFIWL-----------PLQLPV--LWAMVCGLGLGGAF-PLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPW 347 (393)
T ss_pred HHHHHHHHc-----------cchHHH--HHHHHHHHhccchH-HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665544321 111111 12233344443332 33434555665 4678899999999999999999999
Q ss_pred HHHHHHHhhc-cchhhhHhhHHHHHHHHHHHhhccCCCCCC
Q psy4866 456 LFFLMDKHIG-MYSNFLFGGVSSLVCTVYLYYFLLETKGKT 495 (537)
Q Consensus 456 ~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (537)
+.|++.|..| +...|.+.++++++..+....+.+|++++.
T Consensus 348 ~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 348 FSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 9999999987 455566666666666666666777776553
No 24
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.4e-33 Score=280.06 Aligned_cols=380 Identities=15% Similarity=0.128 Sum_probs=256.9
Q ss_pred HHHHHHHHHhhhhhhhhhccchhhHHh-hhcCCCCC--CCCCChhhHHH-----HHHHHHHhhhhhhhHHhhhhhhhhHH
Q psy4866 65 SFLCVTACIAAFTTGMSFAWSAPVLEE-LLSKESPI--PMSPNEGSWVV-----AIIEIGNYLSPIPAGMLVNRIGRKWS 136 (537)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~s~~~~~~~~-----s~~~~~~~~~~~~~G~l~dr~Grr~~ 136 (537)
+.+.....++.+.++++....+.+.|. +.+ ++ +.++. .+++. ++.+++..+++++.|+++||+|||++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNR---EFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 345667777889999999998888775 444 44 56655 46554 34556778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHH--------HHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHH
Q psy4866 137 LLMTGPITTASWIIAMYSRSVL--------GLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILY 208 (537)
Q Consensus 137 l~~~~~l~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i 208 (537)
++++.++++++++++++++|++ .++++|+++|++.|+.++....++.|++|+++|++..+....+..+|.++
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 58889999999999999999999999999999999999999999999988
Q ss_pred HHHHhh------------hhhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHH
Q psy4866 209 TYVLGS------------ELSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQI 276 (537)
Q Consensus 209 ~~~l~~------------~~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 276 (537)
+..+.. .++||+.|++.+++.++........||+|+|...+++.++.
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~--------------------- 235 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA--------------------- 235 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc---------------------
Confidence 865542 35899999998887766555556689998664332111000
Q ss_pred HHHhhhhcccccchH-HhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCCCh-hHHHHHHHHHHHHHhh
Q psy4866 277 IKQNTSKNVERTNFR-EFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFLPS-DYISILFAIILLVSIF 353 (537)
Q Consensus 277 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~ 353 (537)
+.+.+.. .+++++..+.. .... .+......+....|.|.++++. +.+... .....+.++..+++.+
T Consensus 236 --------~~~~~~~~~l~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~ 304 (438)
T PRK09952 236 --------KKRIPVIEALLRHPGAFLK--IIAL-RLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIP 304 (438)
T ss_pred --------cccCCHHHHHHHchHHHHH--HHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0011111 12222222211 1111 1222223455666777777543 433221 1334455667788888
Q ss_pred hHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCcc
Q psy4866 354 PSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSN 433 (537)
Q Consensus 354 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 433 (537)
+.|+++||++||+.+..+.++..++.+.+.... .. ....+..+...++.+.+.+.. .+..+++..|.+|++
T Consensus 305 ~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~e~~p~~ 375 (438)
T PRK09952 305 CFAWLADRFGRRRVYITGALIGTLSAFPFFMAL--EA------QSIFWIVFFSIMLANIAHDMV-VCVQQPMFTEMFGAS 375 (438)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--Hc------CChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCcc
Confidence 999999999999988877665544433322211 00 011222222233333443332 344568899999999
Q ss_pred ccchhhHHHHHHHH-HHHHHHHHHHHHHHHhhc--cchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 434 MKAVSCAVINILCT-TLGLISYKLFFLMDKHIG--MYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 434 ~~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
.|+++.|+.+.... +++.++|.+.+++.+..+ |...+.+.+++.+++.+.. +..++
T Consensus 376 ~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~-~~~~~ 434 (438)
T PRK09952 376 YRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA-LLMKD 434 (438)
T ss_pred hhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH-HHccc
Confidence 99999999776654 899999999999988543 5555666666666665554 34444
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2.8e-34 Score=276.44 Aligned_cols=347 Identities=12% Similarity=0.120 Sum_probs=240.0
Q ss_pred hhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q psy4866 81 SFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGL 160 (537)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l 160 (537)
....+++.+|.+.+ |+|+|..+.|++.+++.+++.+++++.|+++||+|||+++..+......+.+....++|++.+
T Consensus 6 ~~~~~~~~lp~i~~---~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 6 IWVTFSPVLSLVAE---DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHHHHHhhHHHHHH---HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34457889999999 999999999999999999999999999999999999998776665555544333334799999
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHH-HH
Q psy4866 161 YVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL----SYMNYLTYSLIIPIIFT-VT 235 (537)
Q Consensus 161 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~~~~~~~~~~~~~-~~ 235 (537)
+++|+++|++.+. .+.....++|++|+++|++++++...+..+|.+++++++..+ +||+.|++.++++++.. +.
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~ 161 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILV 161 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 9999999999986 455666679999999999999999999999999998887664 99999999888776644 45
Q ss_pred hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhh
Q psy4866 236 FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFT 315 (537)
Q Consensus 236 ~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (537)
++++||+|++. ++ .. +.+ +. ..+++++++++..+. ..+..++...
T Consensus 162 ~~~lp~~p~~~---~~-------------~~--~~~----~~---------~~~~~~ll~~~~~~~----~~~~~~~~~~ 206 (368)
T TIGR00903 162 LAALPALPFQA---AE-------------GF--GFK----DA---------VKEFGALAGRKDLWI----IGAILGFGVA 206 (368)
T ss_pred HHHcCCCCCCC---CC-------------Cc--chH----HH---------HHHHHHHHcChhHHH----HHHHHHHHHH
Confidence 56789998541 00 00 000 00 012456666555433 3333444444
Q ss_pred hHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCc---HHHHH-hhHHHHHHHHHHHHHHHhhhc
Q psy4866 316 GVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRR---VLFLV-SSAGCSLFSFIAGLYYYVTIE 391 (537)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~ 391 (537)
..+.+..|+|.++++.+.+........+. .+.+.+..++++||..|| +.... ...+.++....+...
T Consensus 207 ~~~~~~~wlp~~L~~~g~s~~~~~~~~l~---~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~------ 277 (368)
T TIGR00903 207 LFDNLAIWLEAALRPAGLEDIAGDAVALA---ILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFE------ 277 (368)
T ss_pred HHHHHHHHHHHHHHHCCCChHHHHHHHHH---HHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHc------
Confidence 56677889999998877653323333333 334444457888887654 32222 222223222222211
Q ss_pred cccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhh
Q psy4866 392 LQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFL 471 (537)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 471 (537)
...+..+....+.+.+. ....+..+++..|.+|++.|+++.|+.+..+++++.++|.+.+.+.. |....|.
T Consensus 278 ------~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~ 348 (368)
T TIGR00903 278 ------LNRLALFAFIGIAGLLM-LPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFT 348 (368)
T ss_pred ------cccHHHHHHHHHHHHhh-hhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHH
Confidence 12222222333333332 22334456889999999999999999999999999999999988773 6666788
Q ss_pred HhhHHHHHHHHHH
Q psy4866 472 FGGVSSLVCTVYL 484 (537)
Q Consensus 472 ~~~~~~~~~~~~~ 484 (537)
++++..+++.+..
T Consensus 349 ~~~~~~~i~~~~~ 361 (368)
T TIGR00903 349 FLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHHHHHH
Confidence 8877777777665
No 26
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=9.6e-33 Score=274.27 Aligned_cols=354 Identities=16% Similarity=0.157 Sum_probs=239.5
Q ss_pred HHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHH-HHH-----HHHHhhhhhhhHHhhhhhhhhHHHHHH
Q psy4866 67 LCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVV-AII-----EIGNYLSPIPAGMLVNRIGRKWSLLMT 140 (537)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-s~~-----~~~~~~~~~~~G~l~dr~Grr~~l~~~ 140 (537)
......++.+++.+|...+++..|.+.+ +++.++.+.+.+. +.. .++..+++++.|+++||+|||++++.+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAK---TFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 5677788999999999999999999999 9998888765443 332 233357899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHH--------HHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHH
Q psy4866 141 GPITTASWIIAMYSRSVL--------GLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVL 212 (537)
Q Consensus 141 ~~l~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l 212 (537)
.+++.+++++++++++++ .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987 468899999999999999899999999999999999999888777777666555
Q ss_pred hhh------------hhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHh
Q psy4866 213 GSE------------LSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQN 280 (537)
Q Consensus 213 ~~~------------~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (537)
+.. ++||+.|++..+..++........||++++..++ +
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~-----------------------------~- 222 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK-----------------------------H- 222 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh-----------------------------h-
Confidence 432 5899999986554333322223344443211000 0
Q ss_pred hhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhh
Q psy4866 281 TSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYY 358 (537)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l 358 (537)
+.+.+..+++..++ + +..+...+..+......+.+..|.|.++++ .+.+. +......+..++.+++.++.|++
T Consensus 223 --~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 297 (434)
T PRK15075 223 --RPSMREIFRSLAAN--W-RIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGAL 297 (434)
T ss_pred --ccccccHHHHHHHh--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111111111 1 112222222222334466778889999876 46653 33456667788889999999999
Q ss_pred hcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchh
Q psy4866 359 IDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVS 438 (537)
Q Consensus 359 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 438 (537)
+||++||+.+..+..+..+......... .. ............+.+.+.+. ..+..+.+..|.+|++.|+++
T Consensus 298 ~Dr~g~r~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~e~~p~~~rg~~ 368 (434)
T PRK15075 298 SDRIGRRPVLIAFTVLAILTAYPALSWL-VA-------APSFARMLAVELWLSFLYGS-YNGAMVVALTEVMPAEVRTAG 368 (434)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHH-Hc-------CCchHHHHHHHHHHHHHHHH-HHhhHHHHHHHHCCCCccchh
Confidence 9999999987766544332221111110 00 11111122222233333333 333445788999999999999
Q ss_pred hHHHHHHHHH-HHHHHHHHHHHHHHhhccc
Q psy4866 439 CAVINILCTT-LGLISYKLFFLMDKHIGMY 467 (537)
Q Consensus 439 ~g~~~~~~~~-g~~~~~~~~g~l~~~~g~~ 467 (537)
.++.+..... ++.++|.+.|.+.|..|+.
T Consensus 369 ~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 369 FSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred eeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 9997666554 5888999999999988864
No 27
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.1e-32 Score=273.06 Aligned_cols=387 Identities=11% Similarity=0.068 Sum_probs=255.6
Q ss_pred HHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHH
Q psy4866 65 SFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPIT 144 (537)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~ 144 (537)
|.++....+.......+....+..+|.+.+ + |++..+.+++.+++.++..++++++|+++||+|||++++++.++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~---~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVE---Q-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHH---c-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 334444444455555554556677888887 7 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh----hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHH-HHHHHhh----h
Q psy4866 145 TASWIIAMYSR----SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGIL-YTYVLGS----E 215 (537)
Q Consensus 145 ~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-i~~~l~~----~ 215 (537)
+++.+++++++ +++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+.++|.. .+++++. .
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 99999888764 7888899999999999988888888899999999999999999999998864 4554432 2
Q ss_pred hhHHHHHHHHHHHHHHH-HHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHH--
Q psy4866 216 LSYMNYLTYSLIIPIIF-TVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFRE-- 292 (537)
Q Consensus 216 ~~wr~~~~~~~~~~~~~-~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 292 (537)
.+||+.|++.+++.++. ++..+++||+|+....+ +.++.+ .+. .++ .++ .+.++.+.++
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~-------~~~----~~~---~~~---~~~~~~~~~~~~ 245 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLP-PIEEYK-------NDY----PDD---YNE---KHEQELTAKQIF 245 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC-Chhhhh-------hcc----ccc---ccc---ccCCCccHHHHH
Confidence 38999999988876664 45566778887431100 000000 000 000 000 0000111222
Q ss_pred ---hhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCC-CChhHHHHHHHHHHHHHhhhHhhhhccc--CCc
Q psy4866 293 ---FMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETF-LPSDYISILFAIILLVSIFPSTYYIDRA--GRR 365 (537)
Q Consensus 293 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~ 365 (537)
+++++..+... +..+......+....|.|.++++. +.+ ...+....+..++.+++.++.|+++||+ +||
T Consensus 246 ~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~ 321 (452)
T PRK11273 246 MQYVLPNKLLWYIA----IANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR 321 (452)
T ss_pred HHHHHcChHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 33333333222 222222223456677889999864 554 2344556677788889999999999999 444
Q ss_pred HHHH-HhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHH
Q psy4866 366 VLFL-VSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINI 444 (537)
Q Consensus 366 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 444 (537)
+... ....+..++.+.+... . ....+...+....++.+.. +.......+..|.+|++.||+++|+.+.
T Consensus 322 ~~~~~~~~~l~~~~~~~~~~~---~-------~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 390 (452)
T PRK11273 322 GATGVFFMTLVTIATIVYWLN---P-------AGNPTVDMACMIVIGFLIY-GPVMLIGLHALELAPKKAAGTAAGFTGL 390 (452)
T ss_pred chHHHHHHHHHHHHHHHHHHh---c-------ccChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHcChhhhhhHHHHHHH
Confidence 4322 2222222222222110 0 1112222222222332221 1112223456799999999999999999
Q ss_pred HHHHHHHH-HHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhc
Q psy4866 445 LCTTLGLI-SYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFL 488 (537)
Q Consensus 445 ~~~~g~~~-~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 488 (537)
..++|+.+ +|.+.|.+.|..|+...|.+.++++++++++...+.
T Consensus 391 ~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 391 FGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 99998765 799999999999999999888888887776665443
No 28
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=3.7e-33 Score=279.30 Aligned_cols=359 Identities=14% Similarity=0.127 Sum_probs=232.6
Q ss_pred hhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy4866 80 MSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLG 159 (537)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~ 159 (537)
+......+.+|.+.+ ++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.
T Consensus 50 ~~~~~~~~~~~~l~~---~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~ 126 (476)
T PLN00028 50 VSTFAAAPLLPIIRD---NLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATG 126 (476)
T ss_pred HHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 334456788899999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh----h---------hhhHHHHHHHHH
Q psy4866 160 LYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG----S---------ELSYMNYLTYSL 226 (537)
Q Consensus 160 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~----~---------~~~wr~~~~~~~ 226 (537)
+++.|+++|++.+... ....+++|++|+++|++++++.....++|..+++.+. . ..+||+.|++.+
T Consensus 127 l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g 205 (476)
T PLN00028 127 FIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPG 205 (476)
T ss_pred HHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHH
Confidence 9999999999987654 4566889999999999999998766666665554333 2 147999999999
Q ss_pred HHHHHHHHHhhccc-CChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHH
Q psy4866 227 IIPIIFTVTFMFMP-ESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFM 305 (537)
Q Consensus 227 ~~~~~~~~~~~~~~-esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (537)
++.++..+..++++ +.|. ++.++.. ++. ..++.+....+++.++++..+...+.
T Consensus 206 ~l~l~~~l~~~~~~~~~p~-----~~~~~~~-------~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (476)
T PLN00028 206 LLHIIMGILVLTLGQDLPD-----GNYRELK-------KSG-------------TMPKDSFSKVLRYGVTNYRTWILALT 260 (476)
T ss_pred HHHHHHHHHHHHHcCcCCC-----CchhhHH-------hcC-------------ccccccHHHHHHHHHcCchhHHHHHH
Confidence 88877655554443 3331 0000000 000 00000001123334443332222222
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcH-------HHHHhhHHHH
Q psy4866 306 AFLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRV-------LFLVSSAGCS 376 (537)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~-------~~~~~~~~~~ 376 (537)
++..+.....+..+.|.++.+. +.+. .+.....+..++.+++++++|+++||++||+ .......+.+
T Consensus 261 ----~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~ 336 (476)
T PLN00028 261 ----YGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGG 336 (476)
T ss_pred ----HHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 2222222334556677776553 6552 3456777788999999999999999998652 1112222222
Q ss_pred HHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHH
Q psy4866 377 LFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKL 456 (537)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 456 (537)
+..+++.. ..+.+.....+++++.+..... +..+++..+..| +.+|++.|+.+..+++|+++++.+
T Consensus 337 i~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l 402 (476)
T PLN00028 337 VFCIWLGR------------ANSLGAAIVVMILFSIFVQAAC-GATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLL 402 (476)
T ss_pred HHHHHhcc------------cchHHHHHHHHHHHHHHHHHhh-hhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHH
Confidence 21121111 1122222333333444333322 234456666654 679999999988888888888876
Q ss_pred HHHHHHhhccchhhhHhhHHHHHHHHHHHh
Q psy4866 457 FFLMDKHIGMYSNFLFGGVSSLVCTVYLYY 486 (537)
Q Consensus 457 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 486 (537)
.+ ..+..+|...|.+.+++.+++.++.++
T Consensus 403 ~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 403 FF-TGSSYSTETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred HH-hcCCccHhhHHHHHHHHHHHHHHHHHh
Confidence 54 222335777888888777777665533
No 29
>KOG0255|consensus
Probab=100.00 E-value=2.1e-32 Score=278.36 Aligned_cols=415 Identities=16% Similarity=0.152 Sum_probs=293.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHH
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGP 142 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 142 (537)
.++......+.............++..+ .+ .+..+.....+..+++.+|..+|++++|+++||+|||++++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~---~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~ 156 (521)
T KOG0255|consen 82 KKWLLVIVICLDGWVYDYGSSVYSIVSE--WN---LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLL 156 (521)
T ss_pred cccccccccccceeEecCCCCcccccch--hc---eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHH
Confidence 3333333333333333334444444433 23 677788889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh-h-hHHH
Q psy4866 143 ITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE-L-SYMN 220 (537)
Q Consensus 143 l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-~-~wr~ 220 (537)
+.+++.+++++++|++.+++.|+++|++.++.......++.|++++++|+.+..+ ......|+.+++.++.+ . +||+
T Consensus 157 ~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~ 235 (521)
T KOG0255|consen 157 LFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRW 235 (521)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999 55555555555555544 3 7999
Q ss_pred HHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCC--hhhHHHHHHH---HH-HhhhhcccccchHHhh
Q psy4866 221 YLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKT--ADQVQSELQI---IK-QNTSKNVERTNFREFM 294 (537)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~ 294 (537)
.+++..++.++.++.+++.||||||+..+++.+++.+.+++..+.+ ..+.....+. .+ ......+.+..+.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 315 (521)
T KOG0255|consen 236 LFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLF 315 (521)
T ss_pred HHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhh
Confidence 9999999998887777777899999999999999999998876533 1111111111 11 1111112235678888
Q ss_pred ccc-hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhH
Q psy4866 295 GRS-NMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSA 373 (537)
Q Consensus 295 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 373 (537)
+.+ .++.++...+.++. ....+| ...+...+.+.+......+.+.....+....+...|+.|||.....+..
T Consensus 316 ~~~~l~~~~~~~~~~~~~------~~~~y~-gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~ 388 (521)
T KOG0255|consen 316 RTPRLRYRTLYLLFIWFV------FSLVYY-GLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLF 388 (521)
T ss_pred cCHHHHHHHHHHHHHHHH------HhHHHH-hhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHH
Confidence 754 44444444443321 111111 2222222233344555556666777888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHH
Q psy4866 374 GCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLIS 453 (537)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 453 (537)
+..++++..++..... ..+...+...+..++.+.++... +.+..|++|+..|+.+.+.......++++++
T Consensus 389 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~a 458 (521)
T KOG0255|consen 389 LAGIGLLLFGWLPDDL---------GGWLHWILPLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILA 458 (521)
T ss_pred HHHHHHHHHHHhhccc---------hhHHHHHHHHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888887753111 11233444444444445555444 6999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCCCCHHHHHH
Q psy4866 454 YKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKGKTFNEIQY 501 (537)
Q Consensus 454 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (537)
|.+...... ......+.+++....+..++...++||++++.+.+...
T Consensus 459 p~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~ 505 (521)
T KOG0255|consen 459 PLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLL 505 (521)
T ss_pred HHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHH
Confidence 987654433 22222333356667777777778899999888755433
No 30
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.9e-32 Score=276.07 Aligned_cols=381 Identities=14% Similarity=0.075 Sum_probs=273.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHH
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGP 142 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 142 (537)
++|.++..++++.|+..++.+..+..+|.+.+ ++|.+.++.+|+.++|.++..++.+++|+++||+|||++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~---~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~ 79 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSM---TLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGT 79 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45678888999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccC-CCcccchhhhHhHHHHHHHHHHHHHHhhhh----h
Q psy4866 143 ITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEIS-ETSIRGTIGTLFQISCHLGILYTYVLGSEL----S 217 (537)
Q Consensus 143 l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~ 217 (537)
++.++++++++++|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++.+ +
T Consensus 80 ~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 80 LFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999888888887766 678999999999999999999999988764 8
Q ss_pred HHHHHHHHHHHHHHHH-HHhhcccCChHHHHHhCCHHHHHH------------HHHhhcCCChhhHHHHH----------
Q psy4866 218 YMNYLTYSLIIPIIFT-VTFMFMPESPYFYAIKNQEGKAIE------------SLKWLRNKTADQVQSEL---------- 274 (537)
Q Consensus 218 wr~~~~~~~~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~------------~~~~~~~~~~~~~~~~~---------- 274 (537)
||+.|++...++++.. +..+++||+|.. ++.+.+.... .++...+..........
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQAGR--RDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLG 237 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Confidence 9999999887776644 445567776521 0111111000 00000000000000000
Q ss_pred HHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCC-CChhHHHHHHHHHHHHHh
Q psy4866 275 QIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETF-LPSDYISILFAIILLVSI 352 (537)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 352 (537)
.....+.. .++..-..++++++......+.. +...........+.|.+++.. +.+ .+++.......++..++.
T Consensus 238 ~f~~~e~~-~~~p~~~~~lf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~ 312 (495)
T PRK14995 238 LFIRTQLA-ASRPMIDMRLFTHRIILSGVVMA----MTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSG 312 (495)
T ss_pred HHHHHHhc-CCCCCcCHHHhCCcccHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000000 11111113455544433222222 222223445566788888764 544 245577777889999999
Q ss_pred hhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCc
Q psy4866 353 FPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSS 432 (537)
Q Consensus 353 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 432 (537)
++.|++.||+++|+.+..+.++..++.+++.... .....+......++.+.+.+....+. .....+..|+
T Consensus 313 ~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~l~G~g~g~~~~~~-~~~~~~~~~~ 382 (495)
T PRK14995 313 PIAGILVSRLGLRLVATGGMALSALSFYGLAMTD---------FSTQQWQAWGLMALLGFSAASALLAS-TSAIMAAAPP 382 (495)
T ss_pred HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhc---------CCCchHHHHHHHHHHHHhHHHHHHHH-HHHHHhcCCH
Confidence 9999999999999988888777766665544321 01223334445566666666554443 4667778899
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4866 433 NMKAVSCAVINILCTTLGLISYKLFFLMDKH 463 (537)
Q Consensus 433 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 463 (537)
++++.+.++.++..++|+.+|+.+.|.+.+.
T Consensus 383 ~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 383 EKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988764
No 31
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=4.7e-32 Score=261.84 Aligned_cols=359 Identities=13% Similarity=0.050 Sum_probs=253.3
Q ss_pred hhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH-----h
Q psy4866 81 SFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS-----R 155 (537)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~-----~ 155 (537)
.....+++.+.+.++ ++++|.+|.+++.+++.+++.++.++.|++.||+|.|+++.++.++.++.+++++++ +
T Consensus 49 ~w~~~~~l~~~~~~~--~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~ 126 (462)
T PRK15034 49 VWMLFSAVTVNLNKI--GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNT 126 (462)
T ss_pred HHHHHHHHHHHhhhh--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCC
Confidence 344566666676543 799999999999999999999999999999999999999999999999999999987 8
Q ss_pred hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhh---------------------
Q psy4866 156 SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGS--------------------- 214 (537)
Q Consensus 156 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~--------------------- 214 (537)
|++.+++.|++.|++ +..++.....+++|+|+++||+++++.....++|..+++++..
T Consensus 127 s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g 205 (462)
T PRK15034 127 PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADG 205 (462)
T ss_pred CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 999999999999998 7788999999999999999999999997666666654433321
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHhhc-ccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHH
Q psy4866 215 -ELSYMNYLTYSLIIPIIFTVTFMF-MPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFRE 292 (537)
Q Consensus 215 -~~~wr~~~~~~~~~~~~~~~~~~~-~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (537)
..+||...++..++.++..+..++ .++.|. .+.......+
T Consensus 206 ~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~--------------------------------------~~~~~~~~~~ 247 (462)
T PRK15034 206 SVMSLANAAWIWVPLLAIATIAAWSGMNDIAS--------------------------------------SRASIADQLP 247 (462)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--------------------------------------cccCHHHHHH
Confidence 224788777777777665544443 333220 0000122334
Q ss_pred hhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhh
Q psy4866 293 FMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSS 372 (537)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 372 (537)
.+|++.. +...+.+++.+.++..+..++|.+.++.-..........+..+...+.++++|+++||+|+++++.++.
T Consensus 248 vlk~~~~----Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~ 323 (462)
T PRK15034 248 VLQRLHL----WLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINF 323 (462)
T ss_pred HhCCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHH
Confidence 5555543 334444455556677778888888766321112223344456788899999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCc--------------------
Q psy4866 373 AGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSS-------------------- 432 (537)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------------------- 432 (537)
+++.++...+..... .. ...+.+......+.+..+.+.+..+ .+-++.+.+|+
T Consensus 324 i~~~i~~~~~~l~lp-~~-----~~~~~~~~~~~~~~l~~~~G~gngs-vfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~ 396 (462)
T PRK15034 324 IFMAIFSALLFLTLP-GT-----GSGNFIAFYAVFMGLFLTAGLGSGS-TFQMIAVIFRQITIYRVKMKGGSDEQAQREA 396 (462)
T ss_pred HHHHHHHHHHHHHhc-cc-----cccHHHHHHHHHHHHHHHhcccchH-HHHhhHHHHhhhhhhcccccccchhHHhhHH
Confidence 877766544333221 00 0011222222232233344444333 34677777774
Q ss_pred -cccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhhhHhhHHHHHHHHHHHhhccCC
Q psy4866 433 -NMKAVSCAVINILCTTLGLISYKLFFLMDKHIGM-YSNFLFGGVSSLVCTVYLYYFLLET 491 (537)
Q Consensus 433 -~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (537)
++.|.+.|+....+.+|+++.|.++|...+..|. ...++.+.+..++|.++.+.++.++
T Consensus 397 ~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 397 VTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 1467899999999999999999999999888764 4567888888888888887766443
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=4.2e-33 Score=273.11 Aligned_cols=361 Identities=14% Similarity=0.066 Sum_probs=259.2
Q ss_pred HHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHH
Q psy4866 71 ACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWII 150 (537)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~ 150 (537)
..+..+..+. ....++..|.+.+ ++|+|..+.|++.+++.++..++++++|+++||+|||+++.++.++.+++.++
T Consensus 9 ~~~~~~~~~~-~~~~~~~~~~~~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~ 84 (377)
T TIGR00890 9 TVIMCFTSGY-VYTWTLLAPPLGR---YFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTF 84 (377)
T ss_pred HHHHHHHhhH-HhhhhhHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHH
Confidence 3333444444 3346788999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHH
Q psy4866 151 AMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSL 226 (537)
Q Consensus 151 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~ 226 (537)
+++++|++.++++|++.|++.+..++.....+.+++| ++|+++.++...+.++|.++++.+... .+||+.|++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~ 163 (377)
T TIGR00890 85 YAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMG 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHH
Confidence 9999999999999999999999988888888999997 579999999999999998765544433 37999999999
Q ss_pred HHHHHHHHHh-hcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHH
Q psy4866 227 IIPIIFTVTF-MFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFM 305 (537)
Q Consensus 227 ~~~~~~~~~~-~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (537)
++.++..+.. ++++|.|+. +.+ +++ + ....+...++.++++..+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~---~~~------------~~~--~-------------~~~~~~~~~~~~~~~~~~~~~~~ 213 (377)
T TIGR00890 164 IIFLLVIVLGAFLIGYPPGQ---LIK------------TNI--E-------------VSVKDYTVWEMLRTPQFWVLYLS 213 (377)
T ss_pred HHHHHHHHHHHHheecCchh---ccc------------cCc--c-------------cchhhhhHHHHHcCccHHHHHHH
Confidence 8877755444 445544310 000 000 0 00001123344544443333322
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHH
Q psy4866 306 AFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGL 384 (537)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 384 (537)
..+..+ .......+.+.+.++.+.+. .......+..++.++++++.|++.||++||+.+..+.++..++.+.+..
T Consensus 214 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 289 (377)
T TIGR00890 214 FFLNAV----SGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLF 289 (377)
T ss_pred HHHHhH----HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 222221 12233344455556655542 2345667788899999999999999999999988887777776665543
Q ss_pred HHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4866 385 YYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI 464 (537)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 464 (537)
.. ............+.+.+.+.. .+....+..|.+|+++|+++.|+.+....+|..++|.+.|.+.+..
T Consensus 290 ~~----------~~~~~~~~~~~~~~g~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 358 (377)
T TIGR00890 290 IP----------MLNDVLFLATVALVFFTWGGT-ISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI 358 (377)
T ss_pred cc----------cchhHHHHHHHHHHHHHhccc-hhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 21 011112222233344443332 2344478889999999999999999999999999999999999999
Q ss_pred ccchhhhHhhHHHHHHH
Q psy4866 465 GMYSNFLFGGVSSLVCT 481 (537)
Q Consensus 465 g~~~~~~~~~~~~~~~~ 481 (537)
|+...|.+.+++.+++.
T Consensus 359 g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 359 GFEYTFIVTGAFALTSL 375 (377)
T ss_pred chhhHHHHHHHHHHHhc
Confidence 99988887776666543
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=2.9e-32 Score=268.75 Aligned_cols=356 Identities=17% Similarity=0.137 Sum_probs=257.2
Q ss_pred HHHhhhhhhhhhccchhhHHh-hhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHH
Q psy4866 71 ACIAAFTTGMSFAWSAPVLEE-LLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWI 149 (537)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~ 149 (537)
..+..+...++.++..+.+|. +.+ ++|.|..+.|++.+++.+++.+++++.|+++||+|||++++++.++.+++.+
T Consensus 20 l~~~~~~~~~~~~~~~~~l~~~i~~---~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (399)
T PRK05122 20 IVMFTFISYLTIGLPLAVLPGYVHD---QLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGL 96 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHH
Confidence 444555666677778888887 456 8999999999999999999999999999999999999999999999888777
Q ss_pred HHHHHh--------hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hh
Q psy4866 150 IAMYSR--------SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LS 217 (537)
Q Consensus 150 ~~~~~~--------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~ 217 (537)
++.++. +++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++++.+++. ++
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 176 (399)
T PRK05122 97 LYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGG 176 (399)
T ss_pred HHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHccc
Confidence 665532 577899999999999999999999999999999999999999988888888888777654 58
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccc
Q psy4866 218 YMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRS 297 (537)
Q Consensus 218 wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (537)
||+.+++.++.+++..+.....|+++. . +.+ +.++++.+++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-------------~~~--------------------~~~~~~~~~~~ 218 (399)
T PRK05122 177 LAGLGLLIMLLALLGLLLARPRPAVPP-----V-------------KGE--------------------RLPFRRVLGRV 218 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCC-----C-------------Ccc--------------------chhHHHHHHHH
Confidence 999888777665544433333333210 0 000 00111222111
Q ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHH
Q psy4866 298 NMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSL 377 (537)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 377 (537)
. .......+.. ..+.....+.+.++.+.+.. ..........++.+++.++.+++.||+++|+.+..+..+..+
T Consensus 219 ~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~ 291 (399)
T PRK05122 219 W--PYGMGLALAS----IGFGTIATFITLYYAARGWD-GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEIL 291 (399)
T ss_pred H--HHHHHHHHHH----HHHHHHHHHHHHHHHHcccc-cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 1 1111111111 12334455667666665543 444555667788889999999999999999988887777776
Q ss_pred HHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHH
Q psy4866 378 FSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLF 457 (537)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 457 (537)
+.+++... ++.+..++..++.+.+.+... +.......|..|++.|+++.|+.+....+|..+++.+.
T Consensus 292 ~~~~~~~~------------~~~~~~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 358 (399)
T PRK05122 292 GLLLLWLA------------PSPWMALIGAALTGFGFSLVF-PALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLA 358 (399)
T ss_pred HHHHHHHh------------ccHHHHHHHHHHHHHhHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555442 223334444455555555433 33335667888999999999999999999999999999
Q ss_pred HHHHHhhccchhhhHhhHHHHHHHHHHHhh
Q psy4866 458 FLMDKHIGMYSNFLFGGVSSLVCTVYLYYF 487 (537)
Q Consensus 458 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 487 (537)
|.+.+..|++..+.+.+++++++.++.+.+
T Consensus 359 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 359 GLVASWFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988888888777776655443
No 34
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.9e-31 Score=260.96 Aligned_cols=359 Identities=11% Similarity=0.133 Sum_probs=253.1
Q ss_pred HHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHH
Q psy4866 67 LCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTA 146 (537)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~ 146 (537)
.++.+.+..+..........+.+|.+.+ ++|.++++.++..+++.++..+++++.|+++||+|||++++.+.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 21 AVFSVAFCVACLIIVEFLPVSLLTPMAQ---DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 3333444444444444455667889999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHH
Q psy4866 147 SWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYL 222 (537)
Q Consensus 147 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~ 222 (537)
+.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|.+++. ++||+.|
T Consensus 98 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 177 (394)
T PRK10213 98 SCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVF 177 (394)
T ss_pred HHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998888865 4899999
Q ss_pred HHHHHHHHHHHHHh-hcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHH
Q psy4866 223 TYSLIIPIIFTVTF-MFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKA 301 (537)
Q Consensus 223 ~~~~~~~~~~~~~~-~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (537)
++.++++++..+.. ...||+|+. + + +.....++.++++..+.
T Consensus 178 ~~~~~l~~~~~l~~~~~~p~~~~~-----~--------------~------------------~~~~~~~~~l~~~~~~~ 220 (394)
T PRK10213 178 NAAAVMGVLCIFWIIKSLPSLPGE-----P--------------S------------------HQKQNTFRLLQRPGVMA 220 (394)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCcc-----c--------------c------------------cchhHHHHHhcCHHHHH
Confidence 99887766544333 345665310 0 0 00111233444443333
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHH-HHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHH
Q psy4866 302 FVFMAFLAVFRAFTGVQSIIAYA-NTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFS 379 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 379 (537)
..+...+... +......+. |.+.++.|.+. ..+......+++.+++.++.+++.||.+ |+.+..+..+..+..
T Consensus 221 ~~~~~~~~~~----~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~ 295 (394)
T PRK10213 221 GMIAIFMSFA----GQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHH
Confidence 3222222222 223333444 66666666653 3446677788889999999999999964 444333333333332
Q ss_pred HHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 380 FIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFL 459 (537)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 459 (537)
+.+... ....+......++.+.+++... +...+++.+..| +.+++..+......++|..+|+.+.|.
T Consensus 296 ~~l~~~-----------~~~~~~~~~~~~l~G~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~ 362 (394)
T PRK10213 296 LVLTLW-----------GSDKIVATGVAIIWGLTFALVP-VGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGY 362 (394)
T ss_pred HHHHHH-----------hhhHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222221 1233444445555665554433 334456777777 446778888888889999999999999
Q ss_pred HHHhhccchhhhHhhHHHHHHHHH
Q psy4866 460 MDKHIGMYSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 460 l~~~~g~~~~~~~~~~~~~~~~~~ 483 (537)
+.|..|+...+...+++.++..+.
T Consensus 363 l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 363 ALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHhccChhhHHHHHHHHHHHHHHH
Confidence 999988887776665555444433
No 35
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.6e-32 Score=271.02 Aligned_cols=383 Identities=17% Similarity=0.186 Sum_probs=264.6
Q ss_pred hhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhh
Q psy4866 77 TTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRS 156 (537)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~ 156 (537)
...++....+...|.+.+ ++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~---~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 81 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQE---DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGA 81 (399)
T ss_pred HHHHHHHhhhHhHHHHHH---hhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcC
Confidence 344566677788888998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHH
Q psy4866 157 VLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIF 232 (537)
Q Consensus 157 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~ 232 (537)
++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|.++++.+++. .+||+.|++.+++.++.
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888765 48999999988887665
Q ss_pred HHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHH
Q psy4866 233 TVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVF 311 (537)
Q Consensus 233 ~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (537)
.+. .++.||+|+... ..+.++.....+... .+.++..+.+..+...++.++++..+.. .+..+
T Consensus 162 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 225 (399)
T TIGR00893 162 GVLWLKFIPDPPQKAK-WLTEEEKYIVVGGLL-----------AEQQGKGPSTPKKYQIKELLKDRRVWGL----ALGQF 225 (399)
T ss_pred HHHhhheecCCCCccc-cCCHHHHhhcchhhc-----------cccccccccCCCccchHHHhcCHHHHHH----HHHHH
Confidence 544 445666652100 000000000000000 0000001111113344555554433222 22223
Q ss_pred HHhhhHHHHHHHHHHHHHhc-CCC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHH-hhHHHHHHHHHHHHHHHh
Q psy4866 312 RAFTGVQSIIAYANTIFASS-ETF-LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLV-SSAGCSLFSFIAGLYYYV 388 (537)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 388 (537)
...........+.|.++++. +.+ ...+.......++.+++.++.+++.||++||+.... ......++.+........
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (399)
T TIGR00893 226 LVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFA 305 (399)
T ss_pred HHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 33334556677778877654 443 234466777788899999999999999999862111 111111111111111000
Q ss_pred hhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-cc
Q psy4866 389 TIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG-MY 467 (537)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~ 467 (537)
.. ........+....++.+ ..+..+..+++..|.+|++.|+++.|+.+.+.++|..++|.+.|.+.+..| +.
T Consensus 306 ~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~ 378 (399)
T TIGR00893 306 TN------YVNIPYAALALVALGFF-GLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFA 378 (399)
T ss_pred hc------cchhHHHHHHHHHHHHh-chhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchh
Confidence 00 01112222222222222 222456677899999999999999999999999999999999999999988 88
Q ss_pred hhhhHhhHHHHHHHHHHH
Q psy4866 468 SNFLFGGVSSLVCTVYLY 485 (537)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~ 485 (537)
..+.+.+++.+++.+..+
T Consensus 379 ~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 379 GALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 788777777777665543
No 36
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.8e-31 Score=262.30 Aligned_cols=352 Identities=17% Similarity=0.116 Sum_probs=251.1
Q ss_pred hhhhhhhhccchhhHHh-hhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVLEE-LLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMY 153 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~ 153 (537)
.++.....+...|.+|. +.+ ++|.|..++|++.+++.++..++++++|+++||+|||++++.+.++..++.+....
T Consensus 24 ~~~~~~~~~~~~p~l~~~l~~---~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~ 100 (392)
T PRK12382 24 VFLTYMTVGLPLPVIPLFVHH---DLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLL 100 (392)
T ss_pred HHHHHHHHHHHhhhhhHHHHH---hcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHh
Confidence 33444456677888886 456 89999999999999999999999999999999999999999998887776543322
Q ss_pred --------HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHH
Q psy4866 154 --------SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNY 221 (537)
Q Consensus 154 --------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~ 221 (537)
.++++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++. ++||+.
T Consensus 101 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 180 (392)
T PRK12382 101 AAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAAL 180 (392)
T ss_pred hhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHH
Confidence 35889999999999999999999899999999999999999999999998898888888755 489887
Q ss_pred HHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHH
Q psy4866 222 LTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKA 301 (537)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (537)
+.+..+..++........||.+. ++ +.+.+.++..+. .+..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~--------------------~~------------------~~~~~~~~~~~~-~~~~ 221 (392)
T PRK12382 181 ALTTMVLPLLAWAFNGTVRKVPA--------------------HA------------------GERPSLWSVVGL-IWKP 221 (392)
T ss_pred HHHHHHHHHHHHHHHHhccCCCC--------------------Cc------------------ccCchHHHHHHH-HHHh
Confidence 77655544433322222333210 00 000011111110 0111
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHH
Q psy4866 302 FVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 381 (537)
... ..+. ..+......+.+.++++.+.+ ..........++.+++.++.|++.||+++|+.+..+..+..++.++
T Consensus 222 ~~~-~~l~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~ 295 (392)
T PRK12382 222 GLG-LALQ----GVGFAVIGTFVSLYFASKGWA-MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLL 295 (392)
T ss_pred HHH-HHHH----HHHHhHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHH
Confidence 111 1111 112334556667777766553 3445555667778889999999999999999988887777776655
Q ss_pred HHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 382 AGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMD 461 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 461 (537)
+... .+.+...+...+.+.+.+... +.......|.+|+++||++.|+.+....+|..++|.+.|.+.
T Consensus 296 ~~~~------------~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 362 (392)
T PRK12382 296 LWLA------------PTAWVALAGAALTGAGCSLIF-PALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLA 362 (392)
T ss_pred HHHc------------ccHHHHHHHHHHHHHHHHhHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4431 223333444445555544433 334467788899999999999999999999999999999999
Q ss_pred HhhccchhhhHhhHHHHHHHHHHHhh
Q psy4866 462 KHIGMYSNFLFGGVSSLVCTVYLYYF 487 (537)
Q Consensus 462 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 487 (537)
++.||...|.+.+++.+++.++.+..
T Consensus 363 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 363 TSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999988888877777665444
No 37
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.7e-31 Score=261.04 Aligned_cols=362 Identities=14% Similarity=0.088 Sum_probs=254.7
Q ss_pred HHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHH
Q psy4866 69 VTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASW 148 (537)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~ 148 (537)
...+++.+..++......+.+|.+.+ ++|.+..+.|++.+.+.++..++++++|+++||+|||+++.++.++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~---~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 6 LSLALGTFGLGMAEFGIMGVLTELAH---DVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHhhHHHHHhChHHHHH---HcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 34555667777787788899999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHH
Q psy4866 149 IIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTY 224 (537)
Q Consensus 149 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~ 224 (537)
+++++++|++.+++.|+++|++.+...+....++.|++++++|++++++...+..+|..+++.+++. .+||+.|++
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 9999999999999999999999999888888999999999999999999999999999888877654 489999999
Q ss_pred HHHHHHHHHH-HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHH
Q psy4866 225 SLIIPIIFTV-TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFV 303 (537)
Q Consensus 225 ~~~~~~~~~~-~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (537)
.++..++..+ ..+++||.++ +. + .+. +.. .+.++++..+...
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~----~~---------------~-~~~----------------~~~-~~~~~~~~~~~~~ 205 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRD----EA---------------K-GGL----------------REQ-FHFLRSPAPWLIF 205 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCc----cc---------------c-cCH----------------HHH-HHHhcChHHHHHH
Confidence 8887765443 3455777531 00 0 000 000 1122222222211
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHH
Q psy4866 304 FMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 381 (537)
.. .+....+......|.+.++.+ .+.+. ..+....+..++.+++.++.+++.||+++|+.+..+..+.+++.++
T Consensus 206 ~~----~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~ 281 (382)
T PRK10091 206 AA----TMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLM 281 (382)
T ss_pred HH----HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHH
Confidence 11 111112222333455555544 45543 3446677788899999999999999999999988887776666554
Q ss_pred HHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 382 AGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMD 461 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 461 (537)
+.... +..+...+..++.+.+......+.......+..|.+.++.+ ..+...++|.+++|.+.|.+.
T Consensus 282 ~~~~~-----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~ 348 (382)
T PRK10091 282 LFFFG-----------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMML 348 (382)
T ss_pred HHHHH-----------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHH
Confidence 43321 12223333333333333222223322334444454444443 446778999999999999999
Q ss_pred Hh-hccchhhhHhhHHHHHHHHHHHhh
Q psy4866 462 KH-IGMYSNFLFGGVSSLVCTVYLYYF 487 (537)
Q Consensus 462 ~~-~g~~~~~~~~~~~~~~~~~~~~~~ 487 (537)
|. .++...+.+.++++.+.......+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 349 TLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 96 578777777766666555544333
No 38
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.7e-31 Score=262.23 Aligned_cols=364 Identities=12% Similarity=0.071 Sum_probs=263.8
Q ss_pred HHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHH
Q psy4866 67 LCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTA 146 (537)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~ 146 (537)
+....+++.+..+......++.+|.+.+ ++|+|.++.+++.+.+.+++.++.+++|++.||+|||+++..+.++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~---~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i 84 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAE---YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMIL 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4445566777888888889999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh-----hhHHHH
Q psy4866 147 SWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE-----LSYMNY 221 (537)
Q Consensus 147 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-----~~wr~~ 221 (537)
+.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++++.......+|..++|.+.+. .+||+.
T Consensus 85 ~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~ 164 (394)
T PRK03699 85 AVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWV 164 (394)
T ss_pred HHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 999999999999999999999999999999999999999999999999999888888888888776543 489999
Q ss_pred HHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHH
Q psy4866 222 LTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKA 301 (537)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (537)
|.+.+++.++..+..++ .+.|+. ++. + + + ++ +...++.+ ++
T Consensus 165 f~~~~~~~~~~~~~~~~-~~~p~~--~~~---------------~--~----------~--~~--~~~~~~~~-~~---- 205 (394)
T PRK03699 165 YACIGLVYVAIFILTLF-SEFPAL--GKH---------------A--P----------K--AD--KPVAKEKW-GI---- 205 (394)
T ss_pred HHHHHHHHHHHHHHHHh-cCCccc--ccc---------------C--c----------c--cc--CccccccC-Ch----
Confidence 99888777665443332 222210 000 0 0 0 00 00000011 11
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHH
Q psy4866 302 FVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFS 379 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 379 (537)
.++...+..+........+..|.|.++++. +.+. +.+.......++.++++++.++++||+++|+.+.....+..+..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~ 285 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLM 285 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Confidence 122222222223333556778899998654 6553 34566677788899999999999999999998877666555544
Q ss_pred HHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 380 FIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFL 459 (537)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 459 (537)
.++... .+.+...+..++.+.+.+. ..+...++..+..|. .++...+......++|.+++|.+.|+
T Consensus 286 ~~~~~~------------~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~ 351 (394)
T PRK03699 286 YLFVNT------------DDPSHLLYAILGLGFFSSA-IYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSP 351 (394)
T ss_pred HHHHHc------------CCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 333221 1222333334444444333 334444566666654 46778899999999999999999999
Q ss_pred HHHhhccchhhhHhhHHHHHHHHHHHh
Q psy4866 460 MDKHIGMYSNFLFGGVSSLVCTVYLYY 486 (537)
Q Consensus 460 l~~~~g~~~~~~~~~~~~~~~~~~~~~ 486 (537)
+.+..|++..+++.+++++++.+.+..
T Consensus 352 l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 352 IVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 999999998888877777777655433
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=1.9e-32 Score=271.34 Aligned_cols=371 Identities=14% Similarity=0.100 Sum_probs=268.7
Q ss_pred hhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHH---
Q psy4866 77 TTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMY--- 153 (537)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~--- 153 (537)
...+..+...+.+|.+.+ +++.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 28 ISIFGLGLLGVAVPVQIQ---MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 344455667778888888 88889999999999999999999999999999999999999988888777665543
Q ss_pred --HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHH
Q psy4866 154 --SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLI 227 (537)
Q Consensus 154 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~ 227 (537)
.++++.+++.|+++|++.+...+...+++.|++|+++|+++.++...+..+|..+|+.+++. .+|++.|++.++
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 46788999999999999998889999999999999999999999999999999999888765 479999998887
Q ss_pred HHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHH
Q psy4866 228 IPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAF 307 (537)
Q Consensus 228 ~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (537)
..++..+..+.+||+++.. + +.+ +. .++. +..++..++++..+...+...
T Consensus 185 ~~~~~~~~~~~l~~~~~~~----~------------~~~--~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~ 234 (417)
T PRK10489 185 GTFITLLPLLRLPALPPPP----Q------------PRE--HP---LRSL---------LAGFRFLLASPVVGGIALLGG 234 (417)
T ss_pred HHHHHHHHHHhCCCCCCCC----c------------ccc--cc---hHHH---------HHHHHHHHcChHHHHHHHHHH
Confidence 7777666666777654210 0 000 00 0000 112233444333333222222
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHH
Q psy4866 308 LAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLY 385 (537)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (537)
+..+ ......+.|.+.++ .+.+. ..+.......++.+++.++.+++.||.++++.+..+.++..++.+++...
T Consensus 235 ~~~~-----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 309 (417)
T PRK10489 235 LLTM-----ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM 309 (417)
T ss_pred HHHH-----HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc
Confidence 2111 23445667888777 45542 34466667788899999999999999877777777776666665544331
Q ss_pred HHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4866 386 YYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG 465 (537)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 465 (537)
.+.+...+..++++.+.+. ..+...+++.|..|++.||+++|+.+...++|..++|.+.|.+.+..|
T Consensus 310 ------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g 376 (417)
T PRK10489 310 ------------PMWILAVLCLALFGYLSAI-SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT 376 (417)
T ss_pred ------------chHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc
Confidence 1223333444444444333 234445788899999999999999999999999999999999999999
Q ss_pred cchhhhHhhHHHHHHHHHHHhhccCCCCCCHHH
Q psy4866 466 MYSNFLFGGVSSLVCTVYLYYFLLETKGKTFNE 498 (537)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (537)
+...+...+++.++..++.+...++.|+++++|
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (417)
T PRK10489 377 PVASASASGFGLLIIGVLLLLVLGELRRFRQTP 409 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 888888887777776666667767766554443
No 40
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=8.5e-32 Score=265.89 Aligned_cols=377 Identities=17% Similarity=0.204 Sum_probs=266.1
Q ss_pred HHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHH
Q psy4866 64 FSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPI 143 (537)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l 143 (537)
+|.......+..+..+++.....+..|.+.+ ++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISA---EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 3444555556677777788888888999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHH
Q psy4866 144 TTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYM 219 (537)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr 219 (537)
.+++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++. .+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~ 171 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWR 171 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccce
Confidence 999999999999999999999999999999999999999999999999999999999999999999888765 4899
Q ss_pred HHHHHHHHHHHH-HHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccch
Q psy4866 220 NYLTYSLIIPII-FTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSN 298 (537)
Q Consensus 220 ~~~~~~~~~~~~-~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (537)
+.|++.++..++ ..+..+++||+|++..++ +.++..+..++.......+..++.++. ..+.+..+...+.+++++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 248 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQSALPEQ--KATQGTKRSVFKALFQGKT 248 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccccccccc--ccccchhhHHHHHHhcchh
Confidence 999988755544 445566789998776554 333333333322211100000000000 0000000111222333222
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHH
Q psy4866 299 MKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSL 377 (537)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 377 (537)
.+.... ..+..+...........+.|.+.++.+.+. .......+..++.+++.++.+++.||+++|+... ...+..+
T Consensus 249 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~ 326 (398)
T TIGR00895 249 ARITVL-LWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGAV 326 (398)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHH
Confidence 222222 222222333345566777787777666653 3446677788899999999999999999984443 3333333
Q ss_pred HHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHH
Q psy4866 378 FSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLF 457 (537)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 457 (537)
...++.... .+.+......++.+.+.+... +...++..|.+|++.|+++.|+.+.+..+|.+++|.+.
T Consensus 327 ~~~~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 394 (398)
T TIGR00895 327 FAVLVGSTL-----------FSPTLLLLLGAIAGFFVNGGQ-SGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394 (398)
T ss_pred HHHHHHHHh-----------hCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 333322210 123334445555555555443 45568999999999999999999999999999999998
Q ss_pred HHH
Q psy4866 458 FLM 460 (537)
Q Consensus 458 g~l 460 (537)
|++
T Consensus 395 G~l 397 (398)
T TIGR00895 395 GYL 397 (398)
T ss_pred Hhc
Confidence 875
No 41
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=6.8e-31 Score=259.36 Aligned_cols=376 Identities=15% Similarity=0.065 Sum_probs=265.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHH
Q psy4866 61 LFLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMT 140 (537)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 140 (537)
..+.++..+.+.+..+...++.+.+.|.+|.+.+ ++|.|..+.++..+.+.+++.++.++.|+++||+|||++++++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~ 84 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVE---DFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAG 84 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 3566777788888888888888889999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----h
Q psy4866 141 GPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----L 216 (537)
Q Consensus 141 ~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~ 216 (537)
.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|.++.++......+|..++|.+++. .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 164 (406)
T PRK15402 85 VAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL 164 (406)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999998888999999999999999999998888888888888877654 4
Q ss_pred hHHHHHHHHHHHHHHHHH-HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhc
Q psy4866 217 SYMNYLTYSLIIPIIFTV-TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMG 295 (537)
Q Consensus 217 ~wr~~~~~~~~~~~~~~~-~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (537)
+||+.|++.++..++..+ ..+..||+++.. + +.. . .++ ....++++++
T Consensus 165 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------~~~--~----~~~---------~~~~~~~~~~ 213 (406)
T PRK15402 165 PWRGMFVLFAALAALSFFGLWRAMPETAGRV---G-------------EKL--S----LKE---------LGRDYKLVLK 213 (406)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCCCCccc---c-------------ccc--c----HHH---------HHHHHHHHHc
Confidence 899999998888766544 334567764210 0 000 0 000 0122344555
Q ss_pred cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhH
Q psy4866 296 RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSA 373 (537)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 373 (537)
++..+...+...+... .......+.|.++.+ .+.+. ..+.......++.+++.++.+++.||+++|+.+..+.+
T Consensus 214 ~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~ 289 (406)
T PRK15402 214 NRRFVAGALALGLVSL----PLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLW 289 (406)
T ss_pred CcHHHHHHHHHHHHHH----HHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4443332222222211 122334455666544 34432 22344445566788899999999999999999888877
Q ss_pred HHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHH
Q psy4866 374 GCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLIS 453 (537)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 453 (537)
+..++.+++....... ....+...+...+++.+.+....+ ....... .+++++|+..++.+....++..++
T Consensus 290 ~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~g~g~~~~~~~-~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g 360 (406)
T PRK15402 290 PMVAGLLLAALATVIS-------SHAYLWLTAGLSLYAFGIGLANAG-LYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVG 360 (406)
T ss_pred HHHHHHHHHHHHHHcc-------cccHHHHHHHHHHHHHHHHHHhhh-HHHHHhh-hccccccHHHHHHHHHHHHHHHHH
Confidence 7766666555432111 112233344455555555443322 2233333 344789999999999999999999
Q ss_pred HHHHHHHHHhhccchhhhHhhHHHHHHHHH
Q psy4866 454 YKLFFLMDKHIGMYSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 454 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 483 (537)
+.+.+.+.+..+........++..++..++
T Consensus 361 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK15402 361 IELSKHAYLGGGNGLFNLFNLANGLLWLLL 390 (406)
T ss_pred HHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 999999988877664433433333333333
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.5e-31 Score=264.44 Aligned_cols=397 Identities=13% Similarity=0.109 Sum_probs=260.0
Q ss_pred HHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHH
Q psy4866 65 SFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPIT 144 (537)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~ 144 (537)
+.......+..+.............|.+.+ +|+++++.+++.+++.++..++.++.|+++||+|||+++.++.++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE----QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHHH----cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 334444444555555555555666777765 4999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH----hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh-----
Q psy4866 145 TASWIIAMYS----RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----- 215 (537)
Q Consensus 145 ~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----- 215 (537)
+++.+++++. ++++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+.+..+|..+++.+...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 9998887764 4677888999999999999989889999999999999999999999999999888765432
Q ss_pred hhHHHHHHHHHHHHHHHH-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcc-cccc-hHH
Q psy4866 216 LSYMNYLTYSLIIPIIFT-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNV-ERTN-FRE 292 (537)
Q Consensus 216 ~~wr~~~~~~~~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 292 (537)
.+||+.|++.++++++.. +.++++||+|+....+. .+. .+++..++. .++.+.+. .+.. .+.
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 246 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP--IEE------YRNDYPDDY-------NEKAEQELTAKEIFMQY 246 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC--chh------ccccccccc-------ccccccccchHHHHHHH
Confidence 489999999888876644 55566788874311000 000 000000000 00000000 0111 112
Q ss_pred hhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHH
Q psy4866 293 FMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLV 370 (537)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 370 (537)
+++++..+...+... ..+...+.+..|.|.++++. +.+. .++....+..+..+++.+++|++.||+++++....
T Consensus 247 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 322 (438)
T TIGR00712 247 VLPNKLLWYIAIANV----FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGAT 322 (438)
T ss_pred HccCchHHHHHHHHH----HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHH
Confidence 344443333322222 22233456677889988764 5442 34566777888899999999999999965432222
Q ss_pred hhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHH
Q psy4866 371 SSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLG 450 (537)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 450 (537)
+.....+..+......... ..+.+......+.++.+. .+..........|.+|++.|+++.|+.+...++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg 394 (438)
T TIGR00712 323 GVFFMTLVTIAVIVYWMNP-------AGNPLVDMICMIVIGFLI-YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGG 394 (438)
T ss_pred HHHHHHHHHHHHHHHHhcC-------CCchHHHHHHHHHHHHHH-ccHHHHHHHHHHHhcChhheeeehhhhchHHHhhh
Confidence 3222222111111111000 011222222222222221 11111112456789999999999999999988875
Q ss_pred -HHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 451 -LISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 451 -~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
+++|.+.|.+.|+.|+...+.+..++.+++.+..+.+.+|.|
T Consensus 395 ~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 395 SVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 689999999999999988888888888888777767766654
No 43
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=4.5e-32 Score=270.10 Aligned_cols=369 Identities=15% Similarity=0.141 Sum_probs=246.6
Q ss_pred ccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy4866 83 AWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYV 162 (537)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~ 162 (537)
...+..+|.+.+ ++|.|.++.+++.+.+.++..++.+++|+++||+|||++++.+.++..+++++++++++++.+++
T Consensus 36 ~~~~~~~~~i~~---~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (455)
T TIGR00892 36 KAVTVFFKELQQ---IFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYL 112 (455)
T ss_pred cchhhhHHHHHH---HhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHH
Confidence 446677899999 99999999999999999999999999999999999999999999999999999999999998875
Q ss_pred -HHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHhh
Q psy4866 163 -MRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVTFM 237 (537)
Q Consensus 163 -~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~~~ 237 (537)
.|+++|++.+...+...+++.++++ ++|+++.++...+..+|..+++.+++. ++||+.|++.+++.++..+..+
T Consensus 113 ~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~ 191 (455)
T TIGR00892 113 TAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGA 191 (455)
T ss_pred HHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 5799999998877778888899996 789999999999999998888777654 5899999999988766554443
Q ss_pred cc-cCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhh
Q psy4866 238 FM-PESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTG 316 (537)
Q Consensus 238 ~~-~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (537)
++ ++.+.. .+.+. +..+ ...... ..+ +.+ .....++..+....+.++++..+......++ ...+
T Consensus 192 ~~~~~~~~~--~~~~~-~~~~---~~~~~~--~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~ 256 (455)
T TIGR00892 192 LMRPVGPSQ--RVSKS-KSKE---GLPPDG--STK-KLS--KKSTAEKINRFLDFSLFTHRGFLVYLSGNVI----MFLG 256 (455)
T ss_pred HhCCCCccc--ccccc-cccc---cCCCCC--ccc-ccc--ccchhhhhhhhcchHHhcCchHHHHHHHHHH----HHHH
Confidence 33 322210 00000 0000 000000 000 000 0000000000001134444443322222222 2222
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhccc--CCcHHHHHhhHH--HHHHHHHHHHHHHhhhc
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRA--GRRVLFLVSSAG--CSLFSFIAGLYYYVTIE 391 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 391 (537)
......+++.+.++.+.+. ..+....+.+++.++++++.+++.||. ++++........ .+++.+++..
T Consensus 257 ~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~------- 329 (455)
T TIGR00892 257 FFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL------- 329 (455)
T ss_pred ccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 3445567777777766653 444667778888899999999999974 333333332222 2222222211
Q ss_pred cccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhh
Q psy4866 392 LQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG-MYSNF 470 (537)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~ 470 (537)
..+.+..++..++.+.+.+.. .+...+++.|.+|+++++++.|+.+...++|.+++|.+.|.+.+..| |...|
T Consensus 330 -----~~~~~~~~i~~~~~G~~~g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f 403 (455)
T TIGR00892 330 -----AGDYTGLVIYCIFFGLSFGSV-GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIF 403 (455)
T ss_pred -----hchHHHHHHHHHHHHHHhchH-HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHH
Confidence 123334444455555554433 34455888899999999999999999999999999999999999874 77788
Q ss_pred hHhhHHHHHHHHH
Q psy4866 471 LFGGVSSLVCTVY 483 (537)
Q Consensus 471 ~~~~~~~~~~~~~ 483 (537)
.+.+++.+++.+.
T Consensus 404 ~~~~~~~li~~~~ 416 (455)
T TIGR00892 404 YASGSIVVSAGLF 416 (455)
T ss_pred HHhhHHHHHHHHH
Confidence 8777766665543
No 44
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=2.9e-30 Score=252.39 Aligned_cols=353 Identities=14% Similarity=0.069 Sum_probs=254.5
Q ss_pred HHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHH
Q psy4866 70 TACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWI 149 (537)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~ 149 (537)
.+.++.++.+...+...+.+|.+.+ ++|.|..+.|++.+.+.++..+++++.|+++||+|||+++.++.++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 10 LLLCGLLLLTLAIAVLNTLVPLWLA---QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446677788889999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhhh---HHHHHHHHH
Q psy4866 150 IAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSELS---YMNYLTYSL 226 (537)
Q Consensus 150 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~~---wr~~~~~~~ 226 (537)
++++++|++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+++.+++.+. ++...+..+
T Consensus 87 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~ 166 (381)
T PRK03633 87 GLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTG 166 (381)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHH
Confidence 99999999999999999999999998888888889999999999999999999999999999987642 122222222
Q ss_pred HHHHHHH-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHH
Q psy4866 227 IIPIIFT-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFM 305 (537)
Q Consensus 227 ~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (537)
....... +.....+|++ + + +++..+.++.++++..+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~-------------------------~------------~-~~~~~~~~~~~~~~~~~~~~~~ 208 (381)
T PRK03633 167 LVLAAILPLLFTRILNQQ-------------------------A------------E-NHDSTSIWPMLKLRQARLGVNG 208 (381)
T ss_pred HHHHHHHHHHHhcccCCC-------------------------C------------C-CCCCCCHHHHHHhcchHHHHHH
Confidence 2222111 1111122110 0 0 0001223344443333322111
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHH
Q psy4866 306 AFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGL 384 (537)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 384 (537)
..... ........++|.++++.+.+. ..+.......++.+++++..|++.||+++|+.+..+..+..++.+.+..
T Consensus 209 ~~~~~----~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~ 284 (381)
T PRK03633 209 CIISG----IVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLS 284 (381)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhh
Confidence 11111 123344567788887776653 2345566777888999999999999999999888777666665443321
Q ss_pred HHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4866 385 YYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI 464 (537)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 464 (537)
.........+++.+.. ...|...+.+.|..|+++++...+..+...++|.+++|.+.|.+.|+.
T Consensus 285 ---------------~~~~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~ 348 (381)
T PRK03633 285 ---------------QAAMAPALFILGAAGF-TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY 348 (381)
T ss_pred ---------------hHHHHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0111222233333322 334556677888888888888888888889999999999999999999
Q ss_pred ccchhhhHhhHHHHHHHHH
Q psy4866 465 GMYSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 465 g~~~~~~~~~~~~~~~~~~ 483 (537)
|+...|.+.+.+.++..+.
T Consensus 349 g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 349 SDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred CccHHHHHHHHHHHHHHHH
Confidence 9988888877777655443
No 45
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=2.1e-30 Score=256.67 Aligned_cols=362 Identities=14% Similarity=0.086 Sum_probs=256.9
Q ss_pred HHhhhhhhhhhccchhhHHhhhcCCCCCCCCCCh-----hhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHH
Q psy4866 72 CIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNE-----GSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTA 146 (537)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~ 146 (537)
.++.++.++..+...+.+|.+.+ ++|.+..+ .|++.+++.++..++.+++|+++||+|||+++..+.++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~---~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVE---QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHH---HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 34455666777788899999999 88888665 48999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHH
Q psy4866 147 SWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYL 222 (537)
Q Consensus 147 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~ 222 (537)
+.+++.++++++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|.++++.+++. .+||+.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 175 (408)
T PRK09874 97 VMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVF 175 (408)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 99999999999999999999999855 567778889999999999999999999999999888888765 4899999
Q ss_pred HHHHHHHHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHH
Q psy4866 223 TYSLIIPIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKA 301 (537)
Q Consensus 223 ~~~~~~~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (537)
++.+++.++..+. .+++||.++.. + +++..+. ....+.++++....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------------~~~~~~~----------~~~~~~~~~~~~~~ 222 (408)
T PRK09874 176 FITASVLFLCFLVTLFCIRENFQPV----S-------------------KKEMLHM----------REVVTSLKNPKLVL 222 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccCcccc----c-------------------chhhhHH----------HHHHHhCcCCchHH
Confidence 9988877665443 44456543100 0 0000000 00111222222211
Q ss_pred -HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-C----hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHH
Q psy4866 302 -FVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-P----SDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGC 375 (537)
Q Consensus 302 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 375 (537)
......+.. ........+.+.+..+.+... + .+....+.+++.+++.+..|++.||++||+.+..+..+.
T Consensus 223 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 298 (408)
T PRK09874 223 SLFVTTLIIQ----VATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFS 298 (408)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHH
Confidence 111111111 112233444555555433221 1 123334456777888889999999999999988877766
Q ss_pred HHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHH
Q psy4866 376 SLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYK 455 (537)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 455 (537)
.++.+.+... ...+...+...+.+.+.+.. .+...+...+..|++.+|+.+++.+....+|..++|.
T Consensus 299 ~~~~~~~~~~------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~ 365 (408)
T PRK09874 299 VLLLIPMSFV------------QTPLQLGILRFLLGAADGAL-LPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPL 365 (408)
T ss_pred HHHHHHHHHh------------ccHHHHHHHHHHHHhhhHhh-HHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHH
Confidence 6555444331 12333344444555554443 3444467778889899999999999999999999999
Q ss_pred HHHHHHHhhccchhhhHhhHHHHHHHHHHHhh
Q psy4866 456 LFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYF 487 (537)
Q Consensus 456 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 487 (537)
+.|.+.+..|++..|.+.+++.+++.++.+..
T Consensus 366 ~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 366 MGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888888877766444
No 46
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=3.9e-31 Score=265.68 Aligned_cols=390 Identities=11% Similarity=0.084 Sum_probs=256.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcC-------------------CCCCCCCCChhhHHHHHHHHHHhhhhhh
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSK-------------------ESPIPMSPNEGSWVVAIIEIGNYLSPIP 123 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~s~~~~~~~~s~~~~~~~~~~~~ 123 (537)
.+|.++.++.++......+....+...+.+.++ .+|++++..+.|++.+++.+++.+++++
T Consensus 16 ~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~ 95 (465)
T TIGR00894 16 FRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIP 95 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcc
Confidence 344455555555555455555555555444331 1168899999999999999999999999
Q ss_pred hHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHH
Q psy4866 124 AGMLVNRIGRKWSLLMTGPITTASWIIAMYS--RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQIS 201 (537)
Q Consensus 124 ~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 201 (537)
.|+++||+|||+++.++.++.+++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++...+
T Consensus 96 ~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 175 (465)
T TIGR00894 96 VGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSG 175 (465)
T ss_pred hHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887654 56888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh----h-hHHHHHHHHHHHHHHHHHHhh-cccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHH
Q psy4866 202 CHLGILYTYVLGSE----L-SYMNYLTYSLIIPIIFTVTFM-FMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQ 275 (537)
Q Consensus 202 ~~~G~~i~~~l~~~----~-~wr~~~~~~~~~~~~~~~~~~-~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 275 (537)
..+|.++++.+++. . +||+.|++.++++++..+.++ +.+|+|+.. .+.++. .++..+
T Consensus 176 ~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~--------------~~~~i~ 238 (465)
T TIGR00894 176 FQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH---PCISKF--------------EKKYIN 238 (465)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC---CCCCHH--------------HHHHHH
Confidence 99999999888754 2 899999999988877655544 456776321 000000 000000
Q ss_pred HH-HHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHh
Q psy4866 276 II-KQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSI 352 (537)
Q Consensus 276 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 352 (537)
+. +++..+.+.+.+++++++++.. +...+..++...+.+.+..|+|.++++. +.+. ..+....+..++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~ 314 (465)
T TIGR00894 239 SSLQGQKGSTRQSLPIKAIPKSLPV----WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCS 314 (465)
T ss_pred hhcccccCCCCCCCCHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHH
Confidence 00 0000011113456666665443 3333444444445677788999998764 5542 34466677788899999
Q ss_pred hhHhhhhcccCCcHHH--------HHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhh
Q psy4866 353 FPSTYYIDRAGRRVLF--------LVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTP 424 (537)
Q Consensus 353 ~~~g~l~d~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (537)
+++|+++||+++|+.. ..+......+...+... .. ....+..++.+.+.+.+.+. ..+....
T Consensus 315 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~l~~~~~~~-~~~~~~~ 384 (465)
T TIGR00894 315 IFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALP---YL------SAAFYLTIIILTLANAVSSG-PLAGVLI 384 (465)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH---Hc------CCchHHHHHHHHHHHHHhhh-hhhhhhh
Confidence 9999999987644211 11111111111111111 00 11222222233333333222 2222334
Q ss_pred hccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhhHhhHHHHHHHHHH
Q psy4866 425 LLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI---GMYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 425 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~---g~~~~~~~~~~~~~~~~~~~ 484 (537)
...|..|. .+|.+.|+.+..+.++++++|.+.|.+.+.. +|...|.+.+++.+++.++.
T Consensus 385 ~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 385 NSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred chhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe
Confidence 55566665 7899999999999999999999999887653 35667777777777766554
No 47
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-30 Score=237.80 Aligned_cols=356 Identities=16% Similarity=0.172 Sum_probs=272.1
Q ss_pred ccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHH---H
Q psy4866 83 AWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVL---G 159 (537)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~---~ 159 (537)
...+++.+.+.+ ++++|+.|.+++.++..+...+..++.|.+.||||.|++..++.++..+-.+..+++.+++ +
T Consensus 31 ~l~s~l~~~i~~---~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ 107 (417)
T COG2223 31 TLFSPLGVFIKS---DFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQ 107 (417)
T ss_pred HHHHHHHhhhcc---ccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 345666777777 9999999999999999999999999999999999999999999999999999999987555 9
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHH----HHHhhhhh---HHHHHHHHHHHHHHH
Q psy4866 160 LYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYT----YVLGSELS---YMNYLTYSLIIPIIF 232 (537)
Q Consensus 160 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~----~~l~~~~~---wr~~~~~~~~~~~~~ 232 (537)
+++.+++.|++ |..+.+...++++|+||+++|.++++.. ..++|..+. |.+....+ ||....+..+..++.
T Consensus 108 ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 108 LLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIA 185 (417)
T ss_pred HHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999998 6677899999999999999999999998 777777654 55555567 999888888777664
Q ss_pred H-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccc-cchHHhhccchHHHHHHHHHHHH
Q psy4866 233 T-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVER-TNFREFMGRSNMKAFVFMAFLAV 310 (537)
Q Consensus 233 ~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 310 (537)
. ..++...|.|... ...++.. ..++.+++++. .+...+.+
T Consensus 186 ~v~~~~~~~d~p~~r----------------------------------~~~~~~~~~~~~~v~~~~~----~W~lsllY 227 (417)
T COG2223 186 AVLAWLGMNDVPEHR----------------------------------ASVKPQLPAQLKAVFSNKD----TWLLSLLY 227 (417)
T ss_pred HHHHHHHhCCChhhh----------------------------------ccccccchhHHHHHhcCcc----hHHHHHHH
Confidence 4 4555566665210 0000001 23344444444 44555566
Q ss_pred HHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHh
Q psy4866 311 FRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYV 388 (537)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (537)
+..+.++..+..++|.++++. +.+. +++.......+.+.+.++++|+++||+|.+|.+...+..++++..++......
T Consensus 228 ~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~ 307 (417)
T COG2223 228 FATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTG 307 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccc
Confidence 666777889999999998765 4442 45577777888899999999999999999999999998888888777664211
Q ss_pred hhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-cc
Q psy4866 389 TIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG-MY 467 (537)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~ 467 (537)
.. ...+........+....+.+.+-.. .+.++...+|++ .|.+.|+...++.+|++.-|...|...+..| +.
T Consensus 308 ~~-----~~~~~~~~~~~~l~l~~~~G~GnGs-vfk~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~ 380 (417)
T COG2223 308 FG-----HGGSFVVFVAVFLALFVFAGLGNGS-VFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYT 380 (417)
T ss_pred cc-----cCcchHHHHHHHHHHHHHhccCcch-heeechHHHHhh-hhHHHHHHHHhccccccchhHHHHHHHHhcccHH
Confidence 10 0122333344344455555555444 457888888775 6999999999999999999999999999998 66
Q ss_pred hhhhHhhHHHHHHHHHHHhhc
Q psy4866 468 SNFLFGGVSSLVCTVYLYYFL 488 (537)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~ 488 (537)
..|+++..+.+++.++.+..+
T Consensus 381 ~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 381 GAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888887766554
No 48
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.3e-30 Score=254.32 Aligned_cols=347 Identities=13% Similarity=0.036 Sum_probs=256.4
Q ss_pred HHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy4866 72 CIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIA 151 (537)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~ 151 (537)
.++.++..+..+...+.+|.+.. +++.+..+.+++.+++.++..++++++|+++||+|||++++.+.++..++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVL---AGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 34556666677778888899998 899999999999999999999999999999999999999999999999999988
Q ss_pred HHHh-----hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHH
Q psy4866 152 MYSR-----SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYL 222 (537)
Q Consensus 152 ~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~ 222 (537)
++++ +++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++. .+||+.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~ 161 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAI 161 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 8888 999999999999999999999999999999999999999999999999999999888765 4899999
Q ss_pred HHHHHHHHHHHHHhhcc--cCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHH
Q psy4866 223 TYSLIIPIIFTVTFMFM--PESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMK 300 (537)
Q Consensus 223 ~~~~~~~~~~~~~~~~~--~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (537)
++.++..++..+..+.+ ||.++. ++ ++ ..++...+ .+..++.+++++..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------------~~--~~~~~~~~---------~~~~~~~~~~~~~~~ 213 (365)
T TIGR00900 162 WVDAVGFAISALLIVSVRIPELAAS----EI-------------QA--LSNAVLRD---------TREGIKFVLKNPLLR 213 (365)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCc----cc-------------cc--cchhHHHH---------HHhHHHHHHcCcHHH
Confidence 98887766654444333 332200 00 00 00000000 012334455554444
Q ss_pred HHHHHHHHHHHHHhhhHHHHH-HHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHH
Q psy4866 301 AFVFMAFLAVFRAFTGVQSII-AYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSL 377 (537)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 377 (537)
...+...+.... ..... .+.|.+.++ .+.+. ..+.......++.+++.++.+++.||.+||+.+..+..+.++
T Consensus 214 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 214 TLLLLALLFNLV----FAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHH----HHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHH
Confidence 333333322222 22222 566777665 34442 344666677888899999999999999999988877666666
Q ss_pred HHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHH
Q psy4866 378 FSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLF 457 (537)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 457 (537)
+...+... +.+.+...+..++.+.+.+.. .+...++..|..|++.|+++.|+.+...+++..++|.+.
T Consensus 290 ~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 290 AILVVGLT-----------PPNFPLFLVLWFAIGVGYGPI-NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred HHHHHHhh-----------chhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555442 111334444555555555443 455568899999999999999999999999999999999
Q ss_pred HHHHHhhc
Q psy4866 458 FLMDKHIG 465 (537)
Q Consensus 458 g~l~~~~g 465 (537)
|.+.|..|
T Consensus 358 g~l~~~~g 365 (365)
T TIGR00900 358 GPLADHLG 365 (365)
T ss_pred HHHHHHcC
Confidence 99998754
No 49
>PRK10504 putative transporter; Provisional
Probab=99.98 E-value=8.4e-30 Score=256.75 Aligned_cols=376 Identities=13% Similarity=0.105 Sum_probs=260.7
Q ss_pred HHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHH
Q psy4866 71 ACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWII 150 (537)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~ 150 (537)
++++.++..++.....+.+|.+.+ ++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~---~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 91 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTALPSMAQ---SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLF 91 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHH---HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 445567777888888899999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHH
Q psy4866 151 AMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSL 226 (537)
Q Consensus 151 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~ 226 (537)
++++++++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|..++|.+++. .+||+.|++..
T Consensus 92 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~ 171 (471)
T PRK10504 92 CALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINI 171 (471)
T ss_pred HHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888765 48999999988
Q ss_pred HHHHHHHHHh-hcccCChHHHHHhCCHHHHHHHH--------Hh-hcCCChh-hHHHHHH------------HHHHhhhh
Q psy4866 227 IIPIIFTVTF-MFMPESPYFYAIKNQEGKAIESL--------KW-LRNKTAD-QVQSELQ------------IIKQNTSK 283 (537)
Q Consensus 227 ~~~~~~~~~~-~~~~esp~~l~~~~~~~~a~~~~--------~~-~~~~~~~-~~~~~~~------------~~~~~~~~ 283 (537)
+...+..+.. ...|+.+. .+.+.+...... .. ..+.+.. ....... ...++...
T Consensus 172 ~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 172 PVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7766554433 34454431 111222111100 00 0111000 0000000 00000111
Q ss_pred cccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcc
Q psy4866 284 NVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDR 361 (537)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~ 361 (537)
.++..+. ++++++.+.......++.. .+......+.|.+++. .+.+. ..++......++.+++.++.+++.||
T Consensus 249 ~~~~~~~-~l~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r 323 (471)
T PRK10504 249 NRALFSL-KLFRTRTFSLGLAGSFAGR----IGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR 323 (471)
T ss_pred CCCccCH-HHhcccchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222 3555554433333333222 2244455667777764 44432 33455666677777888899999999
Q ss_pred cCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHH
Q psy4866 362 AGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAV 441 (537)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 441 (537)
+++|+.+..+..+..+...++.+.. .....+...+...+.+.+.+....+ ...+..+..|++.++.++|+
T Consensus 324 ~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 393 (471)
T PRK10504 324 FGYRRVLVATTLGLALVSLLFMLVA---------LLGWYYLLPFVLFLQGMVNSTRFSS-MNTLTLKDLPDNLASSGNSL 393 (471)
T ss_pred cCchHHHHHHHHHHHHHHHHHHhcc---------ccccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCHHhccchHHH
Confidence 9999999888887777665554421 0111222222333444444444433 44777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Q psy4866 442 INILCTTLGLISYKLFFLMDKHIGMY 467 (537)
Q Consensus 442 ~~~~~~~g~~~~~~~~g~l~~~~g~~ 467 (537)
.++...+|..+++.+.|.+.+..|+.
T Consensus 394 ~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 394 LSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999998877653
No 50
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.98 E-value=3.1e-31 Score=260.01 Aligned_cols=368 Identities=12% Similarity=0.078 Sum_probs=248.0
Q ss_pred hhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS 154 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~ 154 (537)
.+...++....+...|.+.+ ++|.+..+.+++.+++.++..++.++.|+++||+|||++++++.++.+++.++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVE---EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHH---HhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 34455667777888899999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHH-HHhhh----hhHHHHHHHHHHHH
Q psy4866 155 RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTY-VLGSE----LSYMNYLTYSLIIP 229 (537)
Q Consensus 155 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~-~l~~~----~~wr~~~~~~~~~~ 229 (537)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++ .++.. .+||+.|++.+++.
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988 34433 48999999888777
Q ss_pred HHH-HHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHH
Q psy4866 230 IIF-TVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFL 308 (537)
Q Consensus 230 ~~~-~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (537)
++. ++..++.||+|+....+.+. + ...++. +.++.+++.+....+...+++++++..+...+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 226 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAE-E----------MPNEEP--DGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYV- 226 (379)
T ss_pred HHHHHHHheeeCCCccccccCccc-c----------Cccccc--ccccccccccccchHHHHHHHHhcchHHHHHHHHH-
Confidence 654 44455677766321000000 0 000000 00000000000011122344444444333222222
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHH
Q psy4866 309 AVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYY 386 (537)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (537)
........+..+.|.++.+. +.+. +.........++.+++.++.+++.||..+++...............+....
T Consensus 227 ---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (379)
T TIGR00881 227 ---FVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYW 303 (379)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh
Confidence 22223455666778877653 5542 345667778888999999999999986433222222111111111111111
Q ss_pred HhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 387 YVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGM 466 (537)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 466 (537)
... ....+...+..++.+.. ..+..+....+..|.+|++.|+++.|+.+...++|+.++|.+.|.+.+..||
T Consensus 304 ~~~-------~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 375 (379)
T TIGR00881 304 LNP-------AANPLMDLICLFALGFL-VYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGW 375 (379)
T ss_pred cCc-------chhHHHHHHHHHHHHHH-HhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcc
Confidence 000 01122222333333332 2223334456788999999999999999999999999999999999999988
Q ss_pred chhh
Q psy4866 467 YSNF 470 (537)
Q Consensus 467 ~~~~ 470 (537)
+..|
T Consensus 376 ~~~f 379 (379)
T TIGR00881 376 AGAF 379 (379)
T ss_pred cccC
Confidence 7643
No 51
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.98 E-value=5e-30 Score=259.92 Aligned_cols=379 Identities=13% Similarity=0.068 Sum_probs=270.2
Q ss_pred HHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHH
Q psy4866 67 LCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTA 146 (537)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~ 146 (537)
+...++++.++..++.....+.+|.+.+ ++|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 79 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAG---DLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTL 79 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 3456677788888999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHH
Q psy4866 147 SWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYL 222 (537)
Q Consensus 147 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~ 222 (537)
+++++++++|++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+++.+++. .+||+.|
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f 159 (485)
T TIGR00711 80 GSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIF 159 (485)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehh
Confidence 999999999999999999999999999999999999999999999999999999999999999888766 4899999
Q ss_pred HHHHHHHHHHHH-HhhcccCChHHHHHhCCHHHHHHH------------HHhhcCCChhhHHHHHH-----------HHH
Q psy4866 223 TYSLIIPIIFTV-TFMFMPESPYFYAIKNQEGKAIES------------LKWLRNKTADQVQSELQ-----------IIK 278 (537)
Q Consensus 223 ~~~~~~~~~~~~-~~~~~~esp~~l~~~~~~~~a~~~------------~~~~~~~~~~~~~~~~~-----------~~~ 278 (537)
++.++++++..+ ..+++||+++. .+++.+..... ..+-.+....+...... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVV 237 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 998888766543 34456665421 11111111100 00000000000000000 000
Q ss_pred HhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHh
Q psy4866 279 QNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPST 356 (537)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g 356 (537)
.+.. .+++....++++++..+...+..++..+ .......+.|.++++. +.+. +.+....+..++.+++.++.|
T Consensus 238 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g 312 (485)
T TIGR00711 238 WELT-DDNPLVDLRLFKYRNFTIGCVYMSLLGL----GLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAG 312 (485)
T ss_pred HHHc-CCCCccCHHHHcCCChHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001 1111111245554444333333332222 2445566778887764 4442 445667778889999999999
Q ss_pred hhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccc
Q psy4866 357 YYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKA 436 (537)
Q Consensus 357 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 436 (537)
++.||++||+.+..+..+.+++...+.+.. . .....+.......+.+.+.+....+.. ....+..|+++++
T Consensus 313 ~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~g 383 (485)
T TIGR00711 313 RMGDKIDPRKLVTIGLILYAVGFYWRAFTF--T------PDTPFLAIALPQFIRGFGMGCFFMPLT-TIALSGLPPHKIA 383 (485)
T ss_pred HHHhhcCcHHHHHHHHHHHHHHHHHHhccC--C------CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHh
Confidence 999999999998888877777666554211 0 112223334445555555555444443 5566778999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4866 437 VSCAVINILCTTLGLISYKLFFLMDKHI 464 (537)
Q Consensus 437 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 464 (537)
++.|+.+..+.+|+.+++.+.+.+.++.
T Consensus 384 ~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 384 RGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988753
No 52
>KOG1330|consensus
Probab=99.97 E-value=3.7e-32 Score=250.96 Aligned_cols=366 Identities=13% Similarity=0.064 Sum_probs=248.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHH
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGP 142 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 142 (537)
..+..++++++.+.++.++...+..+.+.+++ .+|++++..|++.+.+.+.+.+++++.|+++|||.||+++.+|..
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~---~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~ 106 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVLKEVQT---YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF 106 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhhHHHHH---hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH
Confidence 44556777888899999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-----h
Q psy4866 143 ITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-----S 217 (537)
Q Consensus 143 l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----~ 217 (537)
++.++.++++++..||+++++|.+.|+|.+...++++++++|.+|.++|++++++++.+..+|..+|.+++..+ .
T Consensus 107 iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 107 IWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877653 4
Q ss_pred HHHHHHHHHHHHHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHh---
Q psy4866 218 YMNYLTYSLIIPIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREF--- 293 (537)
Q Consensus 218 wr~~~~~~~~~~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 293 (537)
|||.|+..++++++..++ .++.+|.+| +..+|. .+.+ .........++|+
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~r-----ga~~~~-------~~~~--------------~~~~~~ts~~kDl~~l 240 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPER-----GARDEV-------DGEN--------------KMVKPFTSVWKDLKVL 240 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCccc-----cccccc-------ccCC--------------cCCCCccchHHHHHHH
Confidence 999999999999886654 455666541 100000 0000 0000112222222
Q ss_pred hccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCC-------c
Q psy4866 294 MGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGR-------R 365 (537)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-------~ 365 (537)
.+.+......+.+....+...+.......+.+...+-.+... ...+...+...++.+|.+++|.++||+.+ .
T Consensus 241 ~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~ 320 (493)
T KOG1330|consen 241 AKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTL 320 (493)
T ss_pred HccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccch
Confidence 221222222222222222211112222333333333344333 33467777888999999999999999432 1
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHH
Q psy4866 366 VLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINIL 445 (537)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 445 (537)
+.-.+...+.+...+.+.+..... ........+.+++++............-+..|++|++.|.+++++-..+
T Consensus 321 ~~~q~~~~~g~~~s~~~L~~~~~~-------~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~ 393 (493)
T KOG1330|consen 321 RASQLSAALGAPLSIPFLFLFPAF-------TSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVF 393 (493)
T ss_pred hHHHHHHhhhhhHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHH
Confidence 111111111111111111111111 1223333334444444443333334447888999999999999998877
Q ss_pred HHH-HHHHHHHHHHHHHHhh
Q psy4866 446 CTT-LGLISYKLFFLMDKHI 464 (537)
Q Consensus 446 ~~~-g~~~~~~~~g~l~~~~ 464 (537)
..+ |.+-+|++.|.+.|+.
T Consensus 394 ~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 394 EHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHhccCCCcceehhHHHHh
Confidence 655 4455566999998864
No 53
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=3.6e-29 Score=246.76 Aligned_cols=339 Identities=12% Similarity=0.065 Sum_probs=240.5
Q ss_pred hhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhH
Q psy4866 78 TGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSV 157 (537)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~ 157 (537)
..+......|.+|.+.+ ++|.++++.+++.+++.++..++++++|+++||+|||+++..+.++..++.+++++++++
T Consensus 18 ~~~~~~~~~p~~~~i~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 94 (401)
T PRK11043 18 GFLATDMYLPAFKAIQA---DLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA 94 (401)
T ss_pred HHHHHHHHHhhHHHHHH---HHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH
Confidence 34556677888999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHH
Q psy4866 158 LGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFT 233 (537)
Q Consensus 158 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~ 233 (537)
+.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++. .+||+.|++.+++.++..
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 174 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLI 174 (401)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 9999999999999888888888999999999989988888887788888888777654 589999999888877766
Q ss_pred HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHH
Q psy4866 234 VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRA 313 (537)
Q Consensus 234 ~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (537)
+..++++|+++. .+ + ++.+.+++++++++..+...+...+..
T Consensus 175 ~~~~~~~~~~~~----~~--------------~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 216 (401)
T PRK11043 175 LPTLRLKPSKKA----RK--------------Q-----------------SQDALTFKQLLKSKTYLGNVLIFAACS--- 216 (401)
T ss_pred HHHHHcCCCCCc----cc--------------c-----------------chHHHHHHHHHcChhHHHHHHHHHHHH---
Confidence 555556554310 00 0 000123344554333332222222111
Q ss_pred hhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhcc
Q psy4866 314 FTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIEL 392 (537)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (537)
..+.....+.|.++++.+.+. ..+.......++.+++.++.+++.||+++|+.......+.+++.+.+.......
T Consensus 217 -~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 292 (401)
T PRK11043 217 -AAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS--- 292 (401)
T ss_pred -HHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 123445566788877766653 233445556678888999999999999998876665555544443332221111
Q ss_pred ccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy4866 393 QYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMY 467 (537)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 467 (537)
....+..++...+.+.+.+.. .+.......+..| +.+|++.|+.+.....++..++.+.|.+.+.....
T Consensus 293 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 293 ----HPSLVPLLIPFCVMAAANGAI-YPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLT 361 (401)
T ss_pred ----cCcHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhH
Confidence 112222333334444444443 3444456666666 46999999999999999999999999887753333
No 54
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=4.4e-29 Score=246.73 Aligned_cols=357 Identities=12% Similarity=0.128 Sum_probs=248.5
Q ss_pred HHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHH
Q psy4866 69 VTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASW 148 (537)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~ 148 (537)
..+.+..+..++......+.+|.+++ ++|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++.++.+++++++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i~~---~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~ 105 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQFQQ---AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGA 105 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 44445567778888888999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHH---HHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----------
Q psy4866 149 IIA---MYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE---------- 215 (537)
Q Consensus 149 ~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~---------- 215 (537)
+++ .++++++.++++|+++|+|.|...+..+.++.|+.++++|...+++.+..+.+|..+++.++..
T Consensus 106 ~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~ 185 (438)
T PRK10133 106 ALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQS 185 (438)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 875 4688999999999999999999999999999998777777778889999989999888877531
Q ss_pred --------------------hhHHHHHHHHHHH-HHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHH
Q psy4866 216 --------------------LSYMNYLTYSLII-PIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSE 273 (537)
Q Consensus 216 --------------------~~wr~~~~~~~~~-~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 273 (537)
.+||++|+....+ .++..+. ...+||.|. ++ .
T Consensus 186 ~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~--------------~------- 239 (438)
T PRK10133 186 QDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DN--------------H------- 239 (438)
T ss_pred hhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cc--------------c-------
Confidence 2466666543333 3232222 223444220 00 0
Q ss_pred HHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-Hh-cCCCC-ChhHHHHHHHHHHHH
Q psy4866 274 LQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIF-AS-SETFL-PSDYISILFAIILLV 350 (537)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~-~~~~~~~~~~~~~~~ 350 (537)
...+........+++++++..+...+..++.. ........|.+.++ ++ .+.+. ..+.......++.++
T Consensus 240 -----~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~v 310 (438)
T PRK10133 240 -----SDAKQGSFSASLSRLARIRHWRWAVLAQFCYV----GAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFI 310 (438)
T ss_pred -----ccccccchhhhHHHHHhCchHHHHHHHHHHHH----HHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 00000000122345555554443333322222 22334445666664 33 35442 345677888899999
Q ss_pred HhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccC
Q psy4866 351 SIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYF 430 (537)
Q Consensus 351 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (537)
++++++++.||+++|+.+..+..+..+.+++..+. .. ...+..+.+.+++.+..+ |..++...+..
T Consensus 311 G~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~------------~~-~~~~~~~~l~glg~~~i~-P~~~s~a~~~~ 376 (438)
T PRK10133 311 GRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA------------GG-HVGLIALTLCSAFMSIQY-PTIFSLGIKNL 376 (438)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc------------CC-hHHHHHHHHHHHHHHHHH-HHHHHHHHccc
Confidence 99999999999999999888766665554443321 11 123444556666666655 55568888887
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhhhHhhHHHHH
Q psy4866 431 SSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG-MYSNFLFGGVSSLV 479 (537)
Q Consensus 431 p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~ 479 (537)
|++ .+++.++..+ ..+|+.++|.+.|.+.|..| .+..|++..+..+.
T Consensus 377 ~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 377 GQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred chh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 764 6788888764 55788999999999999887 56666544443333
No 55
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=2.4e-29 Score=247.48 Aligned_cols=357 Identities=11% Similarity=0.073 Sum_probs=239.8
Q ss_pred ccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHH---H-HhhHH
Q psy4866 83 AWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAM---Y-SRSVL 158 (537)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~---~-~~~~~ 158 (537)
+...+.++.+.+ ++|.|..+.|++.+.+.++..++.+++|+++||+|||+++..+.++.+++++++. + .++++
T Consensus 30 ~~~~~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (402)
T TIGR00897 30 GLEQGWLSPFLK---ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYP 106 (402)
T ss_pred hhHHHhHHHHHH---HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHH
Confidence 334445566777 8899999999999999999999999999999999999999999999988877653 3 25788
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHH-HHHHHHhhh----hhHHHHHHHHHHHHHHHH
Q psy4866 159 GLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGI-LYTYVLGSE----LSYMNYLTYSLIIPIIFT 233 (537)
Q Consensus 159 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~i~~~l~~~----~~wr~~~~~~~~~~~~~~ 233 (537)
.+++.|+++|++.+...+...+.+.+++|+++|++++++...+.++|. ++++.+++. ++|+..++.......+..
T Consensus 107 ~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 186 (402)
T TIGR00897 107 LILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGG 186 (402)
T ss_pred HHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 889999999999988888888889999999999999999999999996 578877654 476655554433333222
Q ss_pred -HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHH
Q psy4866 234 -VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFR 312 (537)
Q Consensus 234 -~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (537)
+..++.++.++ +++. ++++ +.++ .+..++++++++..+...+. .+.
T Consensus 187 ~~~~~~~~~~~~-------~~~~-------~~~~------~~~~---------~~~~~~~~~~~~~~~~~~~~----~~~ 233 (402)
T TIGR00897 187 VIALFSNKDIFT-------PQHM-------QTRE------KFSE---------LGKAATILFTNPNVLLGGMV----RII 233 (402)
T ss_pred HHHHhccCCCCC-------cccc-------cCCc------chhh---------HHHHHHHHHcChhHHHHHHH----HHH
Confidence 22333443310 0000 0000 0000 01123345554443332222 222
Q ss_pred HhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHH-HhhHHHHHHHHHHHHHHHhhh
Q psy4866 313 AFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFL-VSSAGCSLFSFIAGLYYYVTI 390 (537)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 390 (537)
..........|.|.++++.+.+. +.........++.+++.++.|+++||++||+.+. .+.+...+..+.+.......
T Consensus 234 ~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~- 312 (402)
T TIGR00897 234 NTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF- 312 (402)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 33345566778898888776653 3335556677889999999999999999888764 22233333322222211000
Q ss_pred ccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhh
Q psy4866 391 ELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNF 470 (537)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 470 (537)
....+...+...+.+.+.+. ..+.. ....|..| ++|+++.|+.+...+++..++|.+.|.+.+..|+...+
T Consensus 313 ------~~~~~~~~~~~~~~G~~~~~-~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~ 383 (402)
T TIGR00897 313 ------GHSFAVALIIAIALGIFLAG-YVPLA-AVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVV 383 (402)
T ss_pred ------CCcHHHHHHHHHHHHHHHHH-HHHHH-HHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH
Confidence 11223333444444444433 33433 45566544 57999999999999999999999999999999999888
Q ss_pred hHhhHHHHHHHHHHH
Q psy4866 471 LFGGVSSLVCTVYLY 485 (537)
Q Consensus 471 ~~~~~~~~~~~~~~~ 485 (537)
++.+++.+++.++..
T Consensus 384 ~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 384 WIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888887777666553
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=3.8e-29 Score=244.79 Aligned_cols=356 Identities=12% Similarity=0.088 Sum_probs=246.3
Q ss_pred HhhhhhhhhhccchhhHHhh-hcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHH-HHHHHHHHHHHH
Q psy4866 73 IAAFTTGMSFAWSAPVLEEL-LSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLL-MTGPITTASWII 150 (537)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~l~~~~~~~ 150 (537)
+..+..++..+...|.+|.+ .+ ++|.|..+.|++.+++.++..+.+++.|+++||+||||.++ .+.++..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~ 80 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSE---EVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLL 80 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHH
Confidence 34666777888888998875 56 89999999999999999999999999999999999888755 456666777888
Q ss_pred HHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchh--hhHhHHHHHHHHHHHHHHhhh----hhHHHHHHH
Q psy4866 151 AMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTI--GTLFQISCHLGILYTYVLGSE----LSYMNYLTY 224 (537)
Q Consensus 151 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~ 224 (537)
+++++|++.+++.|+++|.+.+...|...+++.|+.|+++|++. .+....+.++|.++++.+++. ++||+.|++
T Consensus 81 ~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~ 160 (375)
T TIGR00899 81 FAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLT 160 (375)
T ss_pred HHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHH
Confidence 89999999999999999988888888888899999887777654 567777777888888777654 589999999
Q ss_pred HHHHHHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHH
Q psy4866 225 SLIIPIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFV 303 (537)
Q Consensus 225 ~~~~~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (537)
.++..++..+. ++++||.|++..++ . .+.+.++.++++..+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-------------------~~~~~~~~~~~~~~~~~~ 205 (375)
T TIGR00899 161 AALAFVLCGVLVWLFLPSYPRGAPGA----------------L-------------------TRLEVRGLLASRDTRLLF 205 (375)
T ss_pred HHHHHHHHHHHHHHhCCCcccCcccc----------------c-------------------CcchhhhhhcCcchHHHH
Confidence 98877665544 45578876320000 0 000112233333333222
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHH
Q psy4866 304 FMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 381 (537)
....+... .......+.|.++.+ .+.+. ..+.......+..+++.++.|++.||+++|+.+..+.++..+....
T Consensus 206 ~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~ 281 (375)
T TIGR00899 206 VACTLMWG----CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTG 281 (375)
T ss_pred HHHHHHHH----HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 22222221 122334455666543 45442 2334444455566778889999999999999887766554443333
Q ss_pred HHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 382 AGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMD 461 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 461 (537)
+... .+.+.......+.+.+.+.. .+....+..|..|++ ++++.++.+...++|..++|.+.|.+.
T Consensus 282 ~~~~------------~~~~~~~~~~~~~g~~~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~ 347 (375)
T TIGR00899 282 LAAD------------NSLWALLMLQLLNAIFIGIL-AGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILA 347 (375)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 12233333334444444433 344557778888765 679999999999999999999999999
Q ss_pred HhhccchhhhHhhHHHHHHHHHH
Q psy4866 462 KHIGMYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 462 ~~~g~~~~~~~~~~~~~~~~~~~ 484 (537)
+..|++..+.+.+++.+++.++.
T Consensus 348 ~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 348 ERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HhccchhHHHHHHHHHHHHHHHH
Confidence 99999988888887777766654
No 57
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=3e-29 Score=246.44 Aligned_cols=339 Identities=16% Similarity=0.169 Sum_probs=243.3
Q ss_pred hhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Q psy4866 76 FTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR 155 (537)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~ 155 (537)
+...+......+.+|.+.+ ++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++++++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 91 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAA---DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN 91 (385)
T ss_pred HHHHHHHHHhcccHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 4455677778889999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHH
Q psy4866 156 SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPII 231 (537)
Q Consensus 156 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~ 231 (537)
+++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++. .+||+.|++.++..++
T Consensus 92 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 171 (385)
T TIGR00710 92 NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGIL 171 (385)
T ss_pred cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999888888765 4899999988887766
Q ss_pred HHH-HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHH
Q psy4866 232 FTV-TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAV 310 (537)
Q Consensus 232 ~~~-~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (537)
..+ ..++.||+++. .+ ++ +.++ ....+++.++++..+...+...+.
T Consensus 172 ~~~~~~~~~~~~~~~----~~-------------~~--~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~- 218 (385)
T TIGR00710 172 LSALIFFILPETLPY----EA-------------RI--QIST-------------YFETFLLLLKSKMFWGYALIYGAS- 218 (385)
T ss_pred HHHHHHHhCCCCCCC----cc-------------cC--CHHH-------------HHHHHHHHHcCchhHHHHHHHHHH-
Confidence 544 34456765410 00 00 0000 011233444444433333222222
Q ss_pred HHHhhhHHHHHHHHHHHHH-hcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHh
Q psy4866 311 FRAFTGVQSIIAYANTIFA-SSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYV 388 (537)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (537)
.........+.|.+++ ..+.+. ..+.......++.+++.++.+++.||+++|+.+..+..+..++.+++......
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (385)
T TIGR00710 219 ---FGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAIL 295 (385)
T ss_pred ---HHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2223445556676665 345442 33456667788899999999999999999998888777766665555442211
Q ss_pred hhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 389 TIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK 462 (537)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 462 (537)
.. ...........+.+.+.+... +.......|..| +.++++.++.+.....++.+.+.+.+.+.+
T Consensus 296 ~~-------~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 296 GL-------GSWAMIIGPMMFVGIGNSMIS-SIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred cc-------chHHHHHHHHHHHHHHHHHHH-HHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 10 111222223334444444433 344567778777 568999999999888777777766774433
No 58
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=9.1e-29 Score=243.42 Aligned_cols=366 Identities=13% Similarity=0.068 Sum_probs=247.4
Q ss_pred HHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHH
Q psy4866 67 LCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTA 146 (537)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~ 146 (537)
......+..+...++.....|.+|.+.+ +++.+.++.++..+++.+++.++++++|+++||+|||++++.+.+++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~p~l~~i~~---~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 17 FPMALILYDFAAYLTTDLIQPGIINVVR---DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhccCHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 3444566677777888899999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHH
Q psy4866 147 SWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYL 222 (537)
Q Consensus 147 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~ 222 (537)
+++++++++|++.++++|+++|++.+...+...+++.|++|+++|++++++...+..+|..++|.+++. .+||+.|
T Consensus 94 ~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f 173 (413)
T PRK15403 94 ACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLF 173 (413)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 999999999999999999999999887777788889999999999999999999999999998888764 4899999
Q ss_pred HHHHHHHHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHH
Q psy4866 223 TYSLIIPIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKA 301 (537)
Q Consensus 223 ~~~~~~~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (537)
++.++..++..+. ++++||+++. ++ ++ .+.. .....++++++++..+.
T Consensus 174 ~~~~~~~~i~~~~~~~~lp~~~~~---~~--------------~~-~~~~-------------~~~~~~~~ll~~~~~~~ 222 (413)
T PRK15403 174 AIIAVMGLIAFVGLLLAMPETVKR---GA--------------VP-FSAK-------------SVLRDFRNVFRNRLFLT 222 (413)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccc---cC--------------CC-CChH-------------HHHHHHHHHHcCHHHHH
Confidence 9998887765544 4567887420 00 00 0000 00123345555544443
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHH
Q psy4866 302 FVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFS 379 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 379 (537)
..+...+ .......+..+.|.++++. +.+. ..++.......+.+++..+.+++.++..+++.......+..++.
T Consensus 223 ~~l~~~~----~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~ 298 (413)
T PRK15403 223 GAATLSL----SYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGL 298 (413)
T ss_pred HHHHHHH----HHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHH
Confidence 3333222 2223445556678777765 4442 23344555566777777777776654444443322222223332
Q ss_pred HHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 380 FIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFL 459 (537)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 459 (537)
+++....... .+..+...+..++++.+.+..... .....-.. ....+|++.++.+.....+...++...++
T Consensus 299 ~l~~~~~~~~-------~~~~~~~~~~~~l~~~G~~~~~p~-~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~ 369 (413)
T PRK15403 299 ALLIVGNLLW-------PHVWLWSVLGTSLYAFGIGLIFPT-LFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRW 369 (413)
T ss_pred HHHHHHHHHc-------cccHHHHHHHHHHHHHHHHHHhHH-HHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222211000 112222344445555555444322 22222111 22247999999999999999999999998
Q ss_pred HHHhhccchhhhHhhHHHHHH
Q psy4866 460 MDKHIGMYSNFLFGGVSSLVC 480 (537)
Q Consensus 460 l~~~~g~~~~~~~~~~~~~~~ 480 (537)
+.+. +....|...++++.+.
T Consensus 370 ~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 370 LWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHc-CCchHHHHHHHHHHHH
Confidence 8776 5555665555554443
No 59
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=6.4e-29 Score=243.38 Aligned_cols=349 Identities=12% Similarity=0.083 Sum_probs=254.0
Q ss_pred HHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHH
Q psy4866 68 CVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTAS 147 (537)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~ 147 (537)
..++++..+..|+..+...+.+|.+++ ++|+|..+.|++.+.+.+++.+++++.|++.||+|||++++++.++++++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~---~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQ---AFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 345667788888999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH---HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh--------
Q psy4866 148 WIIAMY---SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-------- 216 (537)
Q Consensus 148 ~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-------- 216 (537)
.+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++.++..+
T Consensus 82 ~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~ 161 (410)
T TIGR00885 82 AFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQ 161 (410)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 888654 358999999999999999999999999999999999999999999999999999988776532
Q ss_pred ----------------------hHHHHHHHHHHHHHHHHHHhhc--ccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHH
Q psy4866 217 ----------------------SYMNYLTYSLIIPIIFTVTFMF--MPESPYFYAIKNQEGKAIESLKWLRNKTADQVQS 272 (537)
Q Consensus 217 ----------------------~wr~~~~~~~~~~~~~~~~~~~--~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~ 272 (537)
+||++|++.+++.++..+...+ .||.+. + + +
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~---------------------~--~--~ 216 (410)
T TIGR00885 162 SQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH---------------------S--D--A 216 (410)
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---------------------c--c--c
Confidence 5999999888877665443332 343210 0 0 0
Q ss_pred HHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCCh---hHHHHHHHHHHH
Q psy4866 273 ELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPS---DYISILFAIILL 349 (537)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 349 (537)
++...+...+++++++..+...+..++... .......|++.+.++.+...+. ............
T Consensus 217 ---------~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg----~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~ 283 (410)
T TIGR00885 217 ---------KQISFSASLSRLARIRHYREGVIAQFFYVG----VQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFF 283 (410)
T ss_pred ---------ccccchhhHHHHHhChhHHHHHHHHHHHHH----HHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence 000001123344554444333333333322 2334556777777654332221 233444557788
Q ss_pred HHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhcccc
Q psy4866 350 VSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEY 429 (537)
Q Consensus 350 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (537)
+|+++++++.||+++|+.+.+..++..+..++.... ........+.+.+++.+..+ |..++...+.
T Consensus 284 vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~-------------~~~~~~~~l~~~glf~s~~f-p~i~sl~~~~ 349 (410)
T TIGR00885 284 ISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA-------------GGHVGLYCLTLCSAFMSLMF-PTIYGIALKG 349 (410)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-------------CChHHHHHHHHHHHHHHHHH-HHHHHHHHhh
Confidence 999999999999999998888777777666655442 12233555566666666655 6667888898
Q ss_pred CCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh------ccchhhhHh
Q psy4866 430 FSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI------GMYSNFLFG 473 (537)
Q Consensus 430 ~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~------g~~~~~~~~ 473 (537)
.+++.+..+.++...+ +|+++.|.+.|.+.|.. +....|++.
T Consensus 350 ~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~ 397 (410)
T TIGR00885 350 LGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILP 397 (410)
T ss_pred hhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHHH
Confidence 8877654455554443 99999999999999964 355555543
No 60
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=4.4e-29 Score=242.10 Aligned_cols=338 Identities=21% Similarity=0.277 Sum_probs=277.9
Q ss_pred HHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHH
Q psy4866 71 ACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWII 150 (537)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~ 150 (537)
..+..+...++.....+..|.+.+ +++.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAE---DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 445567777888888999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----hHHHHHHHHH
Q psy4866 151 AMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL----SYMNYLTYSL 226 (537)
Q Consensus 151 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~~~~~~ 226 (537)
..++++++.+++.|++.|++.+...+...+++.|++|+++|++.+++...+..+|..+++.+++.+ +||+.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998888663 6999999988
Q ss_pred HHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHH
Q psy4866 227 IIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMA 306 (537)
Q Consensus 227 ~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (537)
+..++..+..++++ +.++..
T Consensus 161 ~~~~~~~~~~~~~~------------------------------------------------------------~~~~~~ 180 (352)
T cd06174 161 ILGLLLALLLLFLL------------------------------------------------------------RLLLLL 180 (352)
T ss_pred HHHHHHHHHHHHHH------------------------------------------------------------HHHHHH
Confidence 88777655544431 012222
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcH-HHHHhhHHHHHHHHHHH
Q psy4866 307 FLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRV-LFLVSSAGCSLFSFIAG 383 (537)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~-~~~~~~~~~~~~~~~~~ 383 (537)
.+..+...........+.+.+.++. +.+. +.+.......++.+++.++.+++.||+++|+ .+..+..+..++.+.+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 260 (352)
T cd06174 181 ALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA 260 (352)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 2223333334566777788887765 4432 3446777788999999999999999999999 88888888887777665
Q ss_pred HHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4866 384 LYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH 463 (537)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 463 (537)
.. .+.+...+...+.+.+.+.. .+....+..|..|+++|++.+|+.+...+++..+++.+.+.+.+.
T Consensus 261 ~~------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~ 327 (352)
T cd06174 261 LA------------PSLALLLVALLLLGFGLGFA-FPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT 327 (352)
T ss_pred Hh------------ccHHHHHHHHHHHHHHHhcc-chhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 53 22344455555555655544 456679999999999999999999999999999999999999998
Q ss_pred hccchhhhHhhHHHHHHHHHH
Q psy4866 464 IGMYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 464 ~g~~~~~~~~~~~~~~~~~~~ 484 (537)
.+++..+.+.+++.+++.++.
T Consensus 328 ~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 328 GGYGGVFLILAALALLAALLL 348 (352)
T ss_pred cCcchHHHHHHHHHHHHHHHh
Confidence 899988988888888776654
No 61
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=4.7e-29 Score=245.97 Aligned_cols=355 Identities=17% Similarity=0.170 Sum_probs=239.8
Q ss_pred hhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHH-----HHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy4866 77 TTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAI-----IEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIA 151 (537)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~-----~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~ 151 (537)
.+.++....+...+.+.++. ..+.++.+.+.+.+. ..++..+++++.|+++||+|||++++++.++..++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTF-FPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHh-cCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 34555555566666666621 123556666665543 333445789999999999999999999999999999999
Q ss_pred HHHhhHH--------HHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhh---------
Q psy4866 152 MYSRSVL--------GLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGS--------- 214 (537)
Q Consensus 152 ~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~--------- 214 (537)
+++++++ .++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++++.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999875 47889999999999999999999999999999999999999999999999887653
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchH
Q psy4866 215 ---ELSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFR 291 (537)
Q Consensus 215 ---~~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (537)
.++||+.|++.+++.++..+....+||+|++..+++ ++++.+.+.+
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~ 211 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE-------------------------------KHKKKRGPIR 211 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh-------------------------------ccccccCCHH
Confidence 247999999888777666655566777763211100 0011123344
Q ss_pred HhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHH
Q psy4866 292 EFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFL 369 (537)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 369 (537)
+.++++.+ ...... ...+...........+.|.++++ .+.+. .......+..+..+++.++.+++.||++||+.+.
T Consensus 212 ~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 289 (394)
T TIGR00883 212 ETLTKHRK-PFLLGL-GLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLI 289 (394)
T ss_pred HHHHhchH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 45543221 122222 22222233355666778888744 44442 3445666778888999999999999999999877
Q ss_pred HhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHH-HHHHHH
Q psy4866 370 VSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVI-NILCTT 448 (537)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~ 448 (537)
....+..+..+.+.... .. ..+.+.......+.+.+.+... +...++..|.+|++.|+++.++. +....+
T Consensus 290 ~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 360 (394)
T TIGR00883 290 IFTVLAALLAVPLLMAL-LD-------SGSFTLFFFLVLGLALIGGMYT-GPMGSFLPELFPTEVRYTGASLAYNLAGAI 360 (394)
T ss_pred HHHHHHHHHHHHHHHHH-hc-------CCchHHHHHHHHHHHHHHHHHh-hhHHHHHHHhCCccceeeEeeehhHhHHHH
Confidence 55544443322111111 00 1223333344444454444433 44568999999999999999985 455667
Q ss_pred HHHHHHHHHHHHHHhhc-cchhhhHhh
Q psy4866 449 LGLISYKLFFLMDKHIG-MYSNFLFGG 474 (537)
Q Consensus 449 g~~~~~~~~g~l~~~~g-~~~~~~~~~ 474 (537)
|..++|.+.|.+.++.| +...++...
T Consensus 361 g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 361 FGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred HhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 88899999999999988 554444433
No 62
>KOG2532|consensus
Probab=99.97 E-value=1.3e-29 Score=246.73 Aligned_cols=354 Identities=16% Similarity=0.227 Sum_probs=262.7
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHhHhhhhh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR--SVLGLYVMRTLQGFSMAAIY 175 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~ 175 (537)
++++|..+.+++.+++++|+.+++++.|+++||+|.|+++..+.++.++++++..++. +++.+++.|++||++.|..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 7889999999999999999999999999999999999999999999999999998876 45678899999999999999
Q ss_pred hhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHHHHHHhhc-ccCChHHHHHh
Q psy4866 176 VISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE-----LSYMNYLTYSLIIPIIFTVTFMF-MPESPYFYAIK 249 (537)
Q Consensus 176 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-----~~wr~~~~~~~~~~~~~~~~~~~-~~esp~~l~~~ 249 (537)
|+...+.+.|.|++||++..++..++..+|.+++..+++. +||+..|++.++.+++..+++++ ..|+|.-
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~---- 222 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK---- 222 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc----
Confidence 9999999999999999999999999999999988777665 59999999999999987766654 5677721
Q ss_pred CCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhc----ccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy4866 250 NQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKN----VERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYAN 325 (537)
Q Consensus 250 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (537)
.+ .-.++|.+.+++...++ +.+.+++++++.+. ++...+..++...++..+..|+|
T Consensus 223 ------------h~----~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~----vwai~~~~f~~~~~~~~l~~y~P 282 (466)
T KOG2532|consen 223 ------------HP----NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPP----VWAIWISAFGGNWGFYLLLTYLP 282 (466)
T ss_pred ------------CC----CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHH----HHHHHHHHHHHHHHHHHHHHHhh
Confidence 00 01112222222221111 13678898888655 55566666667777889999999
Q ss_pred HHHHhc-CCC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCc---------HHHHHhhHHHHHHHHHHHHHHHhhhcccc
Q psy4866 326 TIFASS-ETF-LPSDYISILFAIILLVSIFPSTYYIDRAGRR---------VLFLVSSAGCSLFSFIAGLYYYVTIELQY 394 (537)
Q Consensus 326 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (537)
.|+++. +++ .+.++...+..+...+..+++|.++||+.+| ..-.++....++.++.+.+..
T Consensus 283 tY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~-------- 354 (466)
T KOG2532|consen 283 TYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS-------- 354 (466)
T ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC--------
Confidence 999876 444 3566888889999999999999999998652 222344444444444444321
Q ss_pred CCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH---hhccchhhh
Q psy4866 395 EIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK---HIGMYSNFL 471 (537)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~~ 471 (537)
....+..++.+.+.....+ .....+........+++.+..+|+.+.+..+.++++|.+.|.+.. ...|+..|+
T Consensus 355 --~~~~~~a~~~l~~~~~~~g--~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~ 430 (466)
T KOG2532|consen 355 --DEHRLLAVILLTIAIGLSG--FNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFL 430 (466)
T ss_pred --CCcchHHHHHHHHHHHHcc--cchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHH
Confidence 1122233333332222222 222222222222155778999999999999999999999999983 347888999
Q ss_pred HhhHHHHHHHHHHHhh
Q psy4866 472 FGGVSSLVCTVYLYYF 487 (537)
Q Consensus 472 ~~~~~~~~~~~~~~~~ 487 (537)
+.+++.+++.++..++
T Consensus 431 i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 431 IAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHhchheeEe
Confidence 9999988888665444
No 63
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=4.6e-30 Score=249.06 Aligned_cols=341 Identities=18% Similarity=0.231 Sum_probs=246.5
Q ss_pred HHhhhhhhhhhccchhhHH-hhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHH
Q psy4866 72 CIAAFTTGMSFAWSAPVLE-ELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWII 150 (537)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~ 150 (537)
+++.+...+......+.+| .+.+ ++|.|..+++++.+++.++..+++++.|+++||+|||+++.++.++.+++.++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAE---ELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHC---CSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHH
Confidence 3456667777778889999 8888 99999999999999999999999999999999999999999999999999777
Q ss_pred HHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----hHHHHHHHHH
Q psy4866 151 AMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL----SYMNYLTYSL 226 (537)
Q Consensus 151 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~~~~~~ 226 (537)
..+++|++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.+++.+ +||+.|++.+
T Consensus 79 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~ 158 (352)
T PF07690_consen 79 LAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISA 158 (352)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHH
T ss_pred hhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccccccc
Confidence 777788889999999999999999999999999999999999999999999999999999998763 7999999999
Q ss_pred HHHHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhccccc-chHHhhccchHHHHHH
Q psy4866 227 IIPIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERT-NFREFMGRSNMKAFVF 304 (537)
Q Consensus 227 ~~~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 304 (537)
++.++..++ .++++++|+....+.+ . ++. .+.++... .++.+.+++..+..++
T Consensus 159 ~~~~~~~il~~~~~~~~~~~~~~~~~--------------~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (352)
T PF07690_consen 159 ILSLIAAILFILFLPEPPPPRERESP--------------K-ESE----------SKKPKPLKPGFKSLFKNPVLWILLI 213 (352)
T ss_dssp HHHHHHHHHHHCCC---STTTT--SS--------------T-TTT------------HHHCCCH-CTHHHHHHCCHHHHH
T ss_pred chhhhhhhhHhhhhhhcccccccccc--------------c-ccc----------cccccccccccccccccchhhhhhh
Confidence 998876653 3445444311000000 0 000 00000011 2344444333332222
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHH-HHhcCCC--CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHH
Q psy4866 305 MAFLAVFRAFTGVQSIIAYANTI-FASSETF--LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 381 (537)
...+.. ........+.|.+ .+..+.+ ........+..+..+++.++.+++.||+++++..........+..+.
T Consensus 214 ~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 214 AFFLFF----FVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHH----HHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHH----HHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 222222 2244567777876 3444554 13335567778888888999999999999988777766666665555
Q ss_pred HHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHH
Q psy4866 382 AGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISY 454 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 454 (537)
+...... .+....+....+.+.+.+.. .+....+..+..|++++|++.|+.+...+++..++|
T Consensus 290 ~~~~~~~---------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 290 LLLLPFS---------SSPVWLIIALFLIGFGFGIV-FPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HCCSHHH---------CHHHHHHHHHHHHHHHHHHH-CHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh---------hhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5433211 12334444555566655554 455669999999999999999999999999999987
No 64
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=4.7e-29 Score=243.92 Aligned_cols=364 Identities=13% Similarity=0.049 Sum_probs=244.1
Q ss_pred HhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHH
Q psy4866 73 IAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAM 152 (537)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~ 152 (537)
++.++..+.........+.+.+ +++.+..+.+++.+++.+++.++.+++|+++||+|||++++++.++.++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 10 AAQFFSALADNALLFAAIALLK---ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 3344444433334455556667 8899999999999999999999999999999999999999999999999998888
Q ss_pred HHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHH
Q psy4866 153 YSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL---SYMNYLTYSLIIP 229 (537)
Q Consensus 153 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~---~wr~~~~~~~~~~ 229 (537)
++.+. ++.|+++|++.+...|...+++.|++|+++|++++++.+....+|.++||.+++.+ .|+..+.+.+...
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~ 163 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIY 163 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87764 68899999999999999999999999999999999999999999999999998764 4555565555444
Q ss_pred HHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHH
Q psy4866 230 IIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLA 309 (537)
Q Consensus 230 ~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (537)
++..+..+.+||+|... +++. .+.....++. +...+.+++++..+...+...+.
T Consensus 164 ~~~~~~~~~l~~~~~~~--~~~~---------------~~~~~~~~~~---------~~~~~~l~~~~~~~~~~~~~~~~ 217 (393)
T PRK11195 164 LLAALFNLFIPRLGARR--PGQS---------------WNPIALLRDF---------FHACRVLWRDKLGRFSLAGTTLF 217 (393)
T ss_pred HHHHHHHhcCCCCcccc--cccC---------------CCHHHHHHHH---------HHHHHHHHhCchhHHHHHHHHHH
Confidence 44445556778775210 0000 0000000000 01123444444433333322222
Q ss_pred HHHHhhhHHHHHHHHHHHHHhc-CCC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHH
Q psy4866 310 VFRAFTGVQSIIAYANTIFASS-ETF-LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYY 387 (537)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (537)
... .....+..+.++++. +.+ ...+......+++.+++.++.+++.||.++++.+..+. +.++..+.+...
T Consensus 218 ~~~----~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~-- 290 (393)
T PRK11195 218 WGA----GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQ-- 290 (393)
T ss_pred HHH----HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHH--
Confidence 221 122223334444332 333 24456777788899999999999999998888776664 333332222221
Q ss_pred hhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 388 VTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNM-KAVSCAVINILCTTLGLISYKLFFLMDKHIGM 466 (537)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 466 (537)
++.+......++.+.+.+....+. .+...+..|++. +|++.++.+...+++..++..+.+.+ +..|.
T Consensus 291 ----------~~~~~~~~~~~~~G~~~g~~~~~~-~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~ 358 (393)
T PRK11195 291 ----------HSLLPAYPLLILIGALGGFFVVPM-NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGV 358 (393)
T ss_pred ----------hHHHHHHHHHHHHHHhhhhhhhhH-HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCC
Confidence 123333444445555555544443 466677655554 69999999999999999999998855 67788
Q ss_pred chhhhHhhHHHHHHHHHHHhh
Q psy4866 467 YSNFLFGGVSSLVCTVYLYYF 487 (537)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~ 487 (537)
...+.+.+...+++..+.+.+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 359 PVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 877777666666665555444
No 65
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=2e-28 Score=240.05 Aligned_cols=351 Identities=11% Similarity=0.072 Sum_probs=240.7
Q ss_pred hhhhhccchhhHHh-hhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhh
Q psy4866 78 TGMSFAWSAPVLEE-LLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRS 156 (537)
Q Consensus 78 ~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~ 156 (537)
.........|.++. +.+ ++|.|..++|++.+.+.++..+..+++|+++||+|||+++.++.++.+++.+++.++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~---~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~ 98 (400)
T PRK11646 22 VVLGFFVVFPLISIRFVD---QLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHE 98 (400)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 33344445666654 456 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHH
Q psy4866 157 VLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE---LSYMNYLTYSLIIPIIFT 233 (537)
Q Consensus 157 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~---~~wr~~~~~~~~~~~~~~ 233 (537)
++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++. .+||+.|++.++..++..
T Consensus 99 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~ 178 (400)
T PRK11646 99 PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAA 178 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999999999999998889999999999999999999999999999999999888876 489999999887766544
Q ss_pred H-HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHH
Q psy4866 234 V-TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFR 312 (537)
Q Consensus 234 ~-~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (537)
+ ..+++||.+. . .. . ++.+..+++.++++......+.......
T Consensus 179 i~~~~~~~~~~~-----~--------------~~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 222 (400)
T PRK11646 179 AFNAWLLPAYKL-----S--------------TV--R--------------TPVREGMTRVLRDKRFVTYVLTLTGYYM- 222 (400)
T ss_pred HHHHHhCCcccc-----c--------------cc--c--------------hhhHHHHHHHHcCchHHHHHHHHHHHHH-
Confidence 3 3344554210 0 00 0 0001123444443333222222211111
Q ss_pred HhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhh-cccCCcHHHHHhhHHHHHHHHHHHHHHHhhh
Q psy4866 313 AFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYI-DRAGRRVLFLVSSAGCSLFSFIAGLYYYVTI 390 (537)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (537)
.......+.|.++++.+... ..+....+.++....+....+++. ||.+.++.+..+.++.+++.+++...
T Consensus 223 ---~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~----- 294 (400)
T PRK11646 223 ---LAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV----- 294 (400)
T ss_pred ---HHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-----
Confidence 12223456788777765542 233444444554544444445555 45666666666666666665544432
Q ss_pred ccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc----c
Q psy4866 391 ELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG----M 466 (537)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g----~ 466 (537)
++.+...+...+++.+.... .|...++..+..|++.||+++|+.+....+|..++|.+.|.+.|..+ .
T Consensus 295 -------~~~~~~~~~~~l~~~g~~~~-~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~ 366 (400)
T PRK11646 295 -------SNLQQLFTLICLFYIGSIIA-EPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQP 366 (400)
T ss_pred -------hhHHHHHHHHHHHHHHHHHH-HccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCc
Confidence 12233333334444444333 34455888899999999999999999999999999999999998753 2
Q ss_pred chhhhHhhHHHHHHHHH
Q psy4866 467 YSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 467 ~~~~~~~~~~~~~~~~~ 483 (537)
...+.+.+++++++.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 367 ELPWMMLGIIGLITLLA 383 (400)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 33444444444444433
No 66
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=1.6e-28 Score=246.23 Aligned_cols=381 Identities=13% Similarity=0.116 Sum_probs=257.8
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhh----
Q psy4866 56 YLHTVLFLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRI---- 131 (537)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~---- 131 (537)
|.++..++++...+.+ .+..|+......+.+|...+ +.|.|..+++.+ +.....+ ++.+++|+++||+
T Consensus 5 ~l~~~~~~~~~~~~~l---~~~~gl~~~~~~~~l~~~l~---~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~ 76 (491)
T PRK11010 5 YLRIFQQPNSAILLIL---GFASGLPLALTSGTLQAWMT---VENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPF 76 (491)
T ss_pred HHHHHcccHHHHHHHH---HHHHHHHHHHHHHHHHHHHH---hCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccC
Confidence 3445555555554444 44567777788889999998 889999999987 4444444 6899999999999
Q ss_pred -hhhHH-HHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHH
Q psy4866 132 -GRKWS-LLMTGPITTASWIIAMYS---RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGI 206 (537)
Q Consensus 132 -Grr~~-l~~~~~l~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 206 (537)
|||+. ++++.++.+++.+++++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.
T Consensus 77 ~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ 156 (491)
T PRK11010 77 LGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAM 156 (491)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHH
Confidence 98875 667777777777777775 4788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-----hhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhh
Q psy4866 207 LYTYVLGSE-----LSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNT 281 (537)
Q Consensus 207 ~i~~~l~~~-----~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (537)
++++.++.. .+||..|++.+++.++..+..+++||+++.. .+ + +..+
T Consensus 157 llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~--------------~-~~~~---------- 208 (491)
T PRK11010 157 LVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI---PV--------------P-KTLE---------- 208 (491)
T ss_pred HHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cc--------------c-cchh----------
Confidence 988766543 4899999999988777666666678865210 00 0 0000
Q ss_pred hhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HhcCCCC-ChhHHH-HHHHHHHHHHhhhHhhh
Q psy4866 282 SKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIF-ASSETFL-PSDYIS-ILFAIILLVSIFPSTYY 358 (537)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~g~l 358 (537)
+....++++.++++..+.......+.... ......+.+.++ +..|.+. +.+... ....++.+++.+++|++
T Consensus 209 --~~~~~~l~~~~~~~~~~~~ll~~~l~~~~----~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L 282 (491)
T PRK11010 209 --QAVVAPLRDFFGRNNAWLILLLIVLYKLG----DAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGIL 282 (491)
T ss_pred --hhHHHHHHHHHcCcCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00012344555544333333222222211 223334445554 4456553 233443 34457889999999999
Q ss_pred hcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchh
Q psy4866 359 IDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVS 438 (537)
Q Consensus 359 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 438 (537)
+||+++|+.+..+.++.++..+.+...... ..+.+......++.....+.+... .+++..+..+++.+++.
T Consensus 283 ~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~--------~~~~~~l~~~~~l~~~~~g~~~~~-~~a~~~~l~~~~~~~t~ 353 (491)
T PRK11010 283 MQRLSLFRALMIFGILQGVSNAGYWLLSIT--------DKNLYSMGAAVFFENLCGGMGTAA-FVALLMTLCNKSFSATQ 353 (491)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--------cccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCCcHHH
Confidence 999999888776665555444333221110 111222222223322222333322 35778888899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhh
Q psy4866 439 CAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYF 487 (537)
Q Consensus 439 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 487 (537)
.|+.+....+|..+++.+.|.+.|..||...|.+.+++++++.+.....
T Consensus 354 ~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 354 FALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888888888887776665443
No 67
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=1.7e-28 Score=241.19 Aligned_cols=343 Identities=14% Similarity=0.134 Sum_probs=235.0
Q ss_pred hhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS 154 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~ 154 (537)
.+..........+.+|.+.+ ++|.|..+.+++.+.+.++..+++++.|+++||+|||++++++.++..++.+++.++
T Consensus 12 ~~~~~~~~~~~~~~lp~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~ 88 (392)
T PRK10473 12 VLLYPAGIDMYLVGLPRIAA---DLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA 88 (392)
T ss_pred HHHHHHHHHHHhhhHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh
Confidence 33444455556688999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHH
Q psy4866 155 RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPI 230 (537)
Q Consensus 155 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~ 230 (537)
++++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.++.. .+||+.|++.++..+
T Consensus 89 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~ 168 (392)
T PRK10473 89 ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGI 168 (392)
T ss_pred CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998888888765 489999999888776
Q ss_pred HHHH-HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHH
Q psy4866 231 IFTV-TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLA 309 (537)
Q Consensus 231 ~~~~-~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (537)
+..+ ..+++||++.. + + +++ ... ....++.++++..+...+...+.
T Consensus 169 i~~~~~~~~~~~~~~~---~-~------------~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ 215 (392)
T PRK10473 169 LVLLLSLFILKETRPA---R-A------------PAA-SSK----------------PRENSESLLNRFFLSRLVITTLS 215 (392)
T ss_pred HHHHHHHHHcCCCCCc---c-c------------CCc-cch----------------HHHHHHHHhCHHHHHHHHHHHHH
Confidence 6443 34556776310 0 0 000 000 00112233333222222222211
Q ss_pred HHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHH
Q psy4866 310 VFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYY 387 (537)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (537)
... ......+.|.++.+ .+.+. ..+......+++.+++.++.+++.||+++|+.+..+..+..++.+.+....
T Consensus 216 ~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~- 290 (392)
T PRK10473 216 VTV----ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP- 290 (392)
T ss_pred HHH----HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 111 22233444555543 35542 234566677888899999999999999999998888877776666555431
Q ss_pred hhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy4866 388 VTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMY 467 (537)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 467 (537)
..+.......+...+.+.++.. ....+..|.+.|+ |.......++..+++.+.+.+.+..|+.
T Consensus 291 -----------~~~~~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~ 353 (392)
T PRK10473 291 -----------SHAVSLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGIS 353 (392)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1122233333333333333322 2334444544443 4444555677778888888888888876
Q ss_pred hhhhHhhH
Q psy4866 468 SNFLFGGV 475 (537)
Q Consensus 468 ~~~~~~~~ 475 (537)
....+.+.
T Consensus 354 ~~~~~~~~ 361 (392)
T PRK10473 354 AWNMLIGI 361 (392)
T ss_pred hhHHHHHH
Confidence 44444433
No 68
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=1.1e-28 Score=241.45 Aligned_cols=358 Identities=12% Similarity=0.053 Sum_probs=247.1
Q ss_pred hhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy4866 74 AAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMY 153 (537)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~ 153 (537)
..++.....+...+.+|.+.++ ++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.++.++
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~--~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~ 92 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSR--QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Confidence 3444455666667777655432 79999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHH
Q psy4866 154 SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL---SYMNYLTYSLIIPI 230 (537)
Q Consensus 154 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~---~wr~~~~~~~~~~~ 230 (537)
+++++.+++.|++.|.+.+...+...++..|.+|+++|++++++.....++|.+++|.+++.+ +|+..|++.++..+
T Consensus 93 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~ 172 (395)
T PRK10054 93 VNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSA 172 (395)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 999999999999999888888888999999999999999999999999999999999888764 89999998887776
Q ss_pred HHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHH
Q psy4866 231 IFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLA 309 (537)
Q Consensus 231 ~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (537)
+..+. .+++||+++ +++ + +. ++ ....++.++++..+...+..++.
T Consensus 173 i~~i~~~~~~~~~~~----~~~--------------~--~~-------~~-------~~~~~~~~~~~~~~~~~~~~~l~ 218 (395)
T PRK10054 173 FPLVFIQIWVQRSEK----AIA--------------T--ET-------GS-------VWSPSVLLQDKALLWFTCSGFLA 218 (395)
T ss_pred HHHHHHHHHHhcccc----ccc--------------c--ch-------hh-------hhhhhhhccCceehHHHHHHHHH
Confidence 65433 344554420 000 0 00 00 00113444444433333333322
Q ss_pred HHHHhhhHHHHHHHHHHHHHh---cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHH
Q psy4866 310 VFRAFTGVQSIIAYANTIFAS---SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLY 385 (537)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (537)
.+. ......+.+.+... .+.+. ..+.......+.........+++.||.++|+.+..+..+..++...+...
T Consensus 219 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 294 (395)
T PRK10054 219 SFV----SGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS 294 (395)
T ss_pred HHH----HHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc
Confidence 222 11222233333322 22211 11233344445555666778899999999998888877776666555431
Q ss_pred HHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4866 386 YYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG 465 (537)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 465 (537)
.++.+...+...+++.+... ..|.....+.+..|++.++++.+..+ ...+|.+++|.+.|.+.|+.|
T Consensus 295 -----------~~~~~~~~~~~~~~~~g~~~-~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g 361 (395)
T PRK10054 295 -----------GNSLLLWGMSAAVFTVGEII-YAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP 361 (395)
T ss_pred -----------chHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC
Confidence 11223333444445554433 33455577888899999999988655 677999999999999999999
Q ss_pred cchhhhHhhHHHHHHHHHH
Q psy4866 466 MYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~ 484 (537)
+...+++.+++..+..++.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 362 PWSLFVILALAIVAAWLLM 380 (395)
T ss_pred hhhHHHHHHHHHHHHHHHH
Confidence 8877776655555554443
No 69
>KOG2533|consensus
Probab=99.97 E-value=6e-29 Score=242.46 Aligned_cols=287 Identities=18% Similarity=0.245 Sum_probs=210.3
Q ss_pred HHHHHHHHHhhhhhhhhhc-cchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHH
Q psy4866 65 SFLCVTACIAAFTTGMSFA-WSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPI 143 (537)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l 143 (537)
+.++..++...+....+-. ...+.+..+.+ |.++...+.+.+.++++++++++.+++|.|.||++..+.+....++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~e---dl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~ 120 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKE---DLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGIL 120 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCcc---ccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHH
Confidence 3444444444444444333 22333334445 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh--------
Q psy4866 144 TTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE-------- 215 (537)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-------- 215 (537)
+++..++....+|++.+++.|++.|+.++..+|....+++.|+.+++|++.++++.++.++|.++|++++..
T Consensus 121 w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~ 200 (495)
T KOG2533|consen 121 WGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG 200 (495)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC
Confidence 999888888899999999999999999999999999999999999999999999999999999999988866
Q ss_pred --hhHHHHHHHHHHHHHHHH-HHhhcccCChH--HHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhc----cc
Q psy4866 216 --LSYMNYLTYSLIIPIIFT-VTFMFMPESPY--FYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKN----VE 286 (537)
Q Consensus 216 --~~wr~~~~~~~~~~~~~~-~~~~~~~esp~--~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 286 (537)
.||||.|++.+++.++.. +.++++|+.|. |...+.+.+-+ .++.++..... .+
T Consensus 201 ~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~------------------~~~~~~~~~~~~~~~~~ 262 (495)
T KOG2533|consen 201 GLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELV------------------VERLRESPSGGIENKFK 262 (495)
T ss_pred CcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHH------------------HHHHHhccCCCcccccC
Confidence 289999999999987755 55667899984 11111100000 01111111111 22
Q ss_pred ccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCC-CChhHHHHHHHHHHHHHhhhHhhhhccc--
Q psy4866 287 RTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETF-LPSDYISILFAIILLVSIFPSTYYIDRA-- 362 (537)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~-- 362 (537)
+..+++.++.+. ++...+..++.....+.+.+|+|.++.+ .+++ .++..+.++..++++++.+++|+++||.
T Consensus 263 ~~~~~~a~~dp~----vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~ 338 (495)
T KOG2533|consen 263 WKGFKEALKDPG----VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKT 338 (495)
T ss_pred HHHHHHHHhchh----HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhh
Confidence 345555565555 4444455555555577889999999988 3344 2455788889999999999999999994
Q ss_pred --CCcHHHHHhhHHHH
Q psy4866 363 --GRRVLFLVSSAGCS 376 (537)
Q Consensus 363 --~~~~~~~~~~~~~~ 376 (537)
.+|........+..
T Consensus 339 ~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 339 IFARRLLFIVFLCLYA 354 (495)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 44444444444333
No 70
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=6.9e-28 Score=235.91 Aligned_cols=331 Identities=12% Similarity=0.172 Sum_probs=228.4
Q ss_pred hhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy4866 80 MSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLG 159 (537)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~ 159 (537)
+......|.+|.+.+ ++|++..+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.
T Consensus 5 ~~~~~~~p~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 81 (377)
T PRK11102 5 LAIDMYLPALPVIAA---DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQ 81 (377)
T ss_pred hHHHHHhccHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 345567799999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHH-H
Q psy4866 160 LYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFT-V 234 (537)
Q Consensus 160 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~-~ 234 (537)
+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++. .+||+.|++.+++.++.. +
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888755 489999998888776654 4
Q ss_pred HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHh
Q psy4866 235 TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAF 314 (537)
Q Consensus 235 ~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (537)
..+++||+++. .+ +++.+.++ ...++++.++++..+...+. .+..+
T Consensus 162 ~~~~~~~~~~~----~~-------------~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~----~~~~~ 207 (377)
T PRK11102 162 VFFFIPETLPK----ER-------------RQPFHLRT-------------TIRNFASLFRHKRVLGYMLA----SGFSF 207 (377)
T ss_pred HHHhCCccCcc----cc-------------cCCCChHH-------------HHHHHHHHHcChHHHHHHHH----HHHHH
Confidence 44567765410 00 00000000 01122344443332222222 22222
Q ss_pred hhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhcc
Q psy4866 315 TGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIEL 392 (537)
Q Consensus 315 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (537)
.+......+.|.++.+ .+.+. +.+....+..++.+++.++.+++.||+++|+.+..+..+..+..+.+......
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~---- 283 (377)
T PRK11102 208 AGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL---- 283 (377)
T ss_pred HHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 2233444455555544 45542 34466677788899999999999999999998888776554433333221110
Q ss_pred ccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHH-HHHHHHHHHH
Q psy4866 393 QYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCT-TLGLISYKLF 457 (537)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~ 457 (537)
+...+...+...++..+.+... +.......|..| +.++++.++.+.... +|..+++.+.
T Consensus 284 ----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 284 ----DLGFWALVVGVAAFVGCVSMIS-SNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred ----hhhHHHHHHHHHHHHHHHHHhh-HHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0122222233333333333222 223356677766 678999998877653 4555555543
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=1.5e-27 Score=231.24 Aligned_cols=334 Identities=14% Similarity=0.070 Sum_probs=235.1
Q ss_pred hhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Q psy4866 76 FTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR 155 (537)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~ 155 (537)
+.+.-......+.+|.+.+ ++|+|.++.+++.+++.++..++.++.|+++||+|||+++.++.++..++.+.+ .++
T Consensus 10 ~~~~~~~~~~~~~lp~l~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 10 LNLRPALTSVGPLLPQIRS---ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP 85 (355)
T ss_pred hcccCccccCcccHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc
Confidence 3333344567899999999 999999999999999999999999999999999999999999999988888877 788
Q ss_pred hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHH
Q psy4866 156 SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL------SYMNYLTYSLIIP 229 (537)
Q Consensus 156 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~------~wr~~~~~~~~~~ 229 (537)
+++.+++.|++.|++.+...+....++.|++| ++|++++++...+.++|..+++.++..+ +||+.|.+.++..
T Consensus 86 ~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~ 164 (355)
T TIGR00896 86 GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPA 164 (355)
T ss_pred cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 99999999999999999988888889999986 5899999999999999988887776442 3998888766554
Q ss_pred HHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHH
Q psy4866 230 IIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLA 309 (537)
Q Consensus 230 ~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (537)
++..+ .++|+.++ +. + .+++..+...++.++++..+...+...
T Consensus 165 ~~~~~--~~~~~~~~------~~-------------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 207 (355)
T TIGR00896 165 LLALL--AWIPQVRR------RV-------------A--------------ANQTTTRLTPVRIWRSPLAWQVTVFFG-- 207 (355)
T ss_pred HHHHH--HHhhhhcc------cc-------------C--------------CCCCCCCCCCchhhcCHhHHHHHHHHH--
Confidence 43322 23343310 00 0 000000122334454443333222222
Q ss_pred HHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhccc-CCcHHHHHhhHHHHHHHHHHHHHHH
Q psy4866 310 VFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRA-GRRVLFLVSSAGCSLFSFIAGLYYY 387 (537)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (537)
.....+.....|+|.++++.+.+. ..+....+..++.++++++.|++.||+ +||+.+..+..+.+++.+.+.+..
T Consensus 208 --~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~- 284 (355)
T TIGR00896 208 --LQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP- 284 (355)
T ss_pred --HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh-
Confidence 222234556678898888776653 345677778899999999999999999 456666666666666655444321
Q ss_pred hhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhcccc-CCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 388 VTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEY-FSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGM 466 (537)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 466 (537)
..... ....+++.+.+... +...+...+. .+++.++...++.+...+++.+++|.+.|.+.|+.|.
T Consensus 285 -----------~~~~~-~~~~l~g~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 285 -----------MHGLW-AWALVLGLGQGGAF-PLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred -----------hhHHH-HHHHHHHHhhhhHh-HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11111 12344455443333 3333444433 3456678999999999999999999999999998874
Q ss_pred c
Q psy4866 467 Y 467 (537)
Q Consensus 467 ~ 467 (537)
+
T Consensus 352 ~ 352 (355)
T TIGR00896 352 W 352 (355)
T ss_pred c
Confidence 3
No 72
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=6e-27 Score=230.40 Aligned_cols=334 Identities=15% Similarity=0.166 Sum_probs=229.7
Q ss_pred hhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhH
Q psy4866 78 TGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSV 157 (537)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~ 157 (537)
..+......|.+|.+.+ ++|.|+.+.+++.+++.++..++++++|+++||+|||++++++.++..++.+++.+++++
T Consensus 20 ~~~~~~~~~p~~~~i~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 96 (394)
T PRK11652 20 GQMAQTIYVPAIADMAR---DLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSL 96 (394)
T ss_pred HHHHHHHHhccHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 33455667788999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHH
Q psy4866 158 LGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFT 233 (537)
Q Consensus 158 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~ 233 (537)
+.+++.|++.|++.+...+....+..|.+++++|+++.++...+..+|..++|.+++. .+||+.|++.++..++..
T Consensus 97 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 97 TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 9999999999999988888888899999999999999999999999988888887755 489999999887765543
Q ss_pred -HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHH
Q psy4866 234 -VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFR 312 (537)
Q Consensus 234 -~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (537)
+..+++||+++.. +.+.+ .+..+++.++++..+...+......
T Consensus 177 ~~~~~~~~~~~~~~----------------------~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-- 220 (394)
T PRK11652 177 FSMARWMPETRPAD----------------------ARRTR------------VLASYRTLLSNRRFNCYLLMLIGTL-- 220 (394)
T ss_pred HHHHHhCCccCccc----------------------cchhH------------HHHHHHHHHcChHHHHHHHHHHHHH--
Confidence 4445677764110 00000 0122334444443333232222211
Q ss_pred HhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhh
Q psy4866 313 AFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTI 390 (537)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (537)
.+...+..+.+.++++ .+.+. ..+.......++.+++.++.+++.||.+++... ......++.+.+.......
T Consensus 221 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~- 295 (394)
T PRK11652 221 --AGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPGWFG- 295 (394)
T ss_pred --HHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhc-
Confidence 2233334445556655 34432 223444555667777888888888888732222 2222222222211110000
Q ss_pred ccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4866 391 ELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH 463 (537)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 463 (537)
....+.......+.+.+.+... +....+..|..| +++|++.++.+....+|+++++.+.+.+...
T Consensus 296 ------~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 296 ------VMNVWTLLVPAALFFFGAGMLF-PLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred ------cccHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 1122334444455555555433 445577778877 4689999999999999999999988877554
No 73
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=1.3e-26 Score=227.45 Aligned_cols=352 Identities=13% Similarity=0.095 Sum_probs=225.0
Q ss_pred hhhhhhhhccchhhHHhh-hcCCCCCCCCCChhhHHHHHHHH-HHhhhhhhhHHhhhhhhhhHHH-HHHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVLEEL-LSKESPIPMSPNEGSWVVAIIEI-GNYLSPIPAGMLVNRIGRKWSL-LMTGPITTASWIIA 151 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l-~~~~~l~~~~~~~~ 151 (537)
.++.++......|.+|.+ .+ ++|.|.+++|++.+.+.+ +..++.+++|+ +||+||||.+ ..+.++.+++..+.
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~---~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~ 99 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTD---EVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLF 99 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHH
Confidence 444555666667777664 55 899999999999876655 66666666666 9999998875 45666667788888
Q ss_pred HHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCccc--chhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHH
Q psy4866 152 MYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIR--GTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYS 225 (537)
Q Consensus 152 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~ 225 (537)
+++++++.+++.+.+.|...+...+...+++.|+.++++| +...++.+.+.++|.+++|.+++. +|||..|++.
T Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~ 179 (393)
T PRK15011 100 AWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSA 179 (393)
T ss_pred HHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHH
Confidence 8999999887666555545567788888888888876655 345577888888888888888855 5999999998
Q ss_pred HHHHHHHHH-HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHH
Q psy4866 226 LIIPIIFTV-TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVF 304 (537)
Q Consensus 226 ~~~~~~~~~-~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (537)
++..++..+ .++++||.|+- + + + . . . + ....++ +++.......
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~---~-~--~-----------~--~----------~-~----~~~~~~--~~~~~~~~~~ 223 (393)
T PRK15011 180 AVAFIVCGVMVWLFLPSMRKE---L-P--L-----------A--T----------G-T----LEAPRR--NRRDTLLLFV 223 (393)
T ss_pred HHHHHHHHHHHHhhcCccCCC---C-c--c-----------c--c----------c-c----cccccc--ccccHHHHHH
Confidence 887766544 44557776410 0 0 0 0 0 0 0 000000 0111111111
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 305 MAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
...+ .+........+.|.++++ .+.+. ..+.......++.+++.++.|+++||+++|+.+..+.....+....+
T Consensus 224 ~~~~----~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~ 299 (393)
T PRK15011 224 ICTL----MWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM 299 (393)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 1111 112233445567777754 34442 23344445556778889999999999999988776655444433222
Q ss_pred HHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 383 GLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK 462 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 462 (537)
... .+.+..+....+.+...+... +....+..|..|+ .++++.++.+...++|..++|.+.|.+.+
T Consensus 300 ~~~------------~~~~~~l~~~~l~~~~~g~~~-~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~ 365 (393)
T PRK15011 300 LMA------------HSPAILLGLQLLNAIYIGILG-GIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE 365 (393)
T ss_pred HHH------------hhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 122222222222223322222 2233667788886 48999999999999999999999999999
Q ss_pred hhccchhhhHhhHHHHHHHHHH
Q psy4866 463 HIGMYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 463 ~~g~~~~~~~~~~~~~~~~~~~ 484 (537)
..|+...+.+.+++.+++.++.
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK15011 366 IWNYHAVFWFALVMIIATLFCL 387 (393)
T ss_pred HhhhHHHHHHHHHHHHHHHHHH
Confidence 9899888877777776665554
No 74
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=5.2e-27 Score=229.22 Aligned_cols=355 Identities=11% Similarity=0.041 Sum_probs=254.5
Q ss_pred HHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHH----HHHHHHHHHH
Q psy4866 72 CIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSL----LMTGPITTAS 147 (537)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----~~~~~l~~~~ 147 (537)
.+..+...+..+...|.+|.+.+ ++|.|..++|++.+++.+...++++++|+++||+|||... .++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~p~l~~~l~---~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~- 85 (382)
T TIGR00902 10 ALGFFGYFCAYGIFLPFFPAWLK---GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-
Confidence 34455566677889999999999 9999999999999999999999999999999999985433 333222222
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHH
Q psy4866 148 WIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLT 223 (537)
Q Consensus 148 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~ 223 (537)
.++..+++++.+++.|+++|.+.+...|...++..++ +++|+++.+....+.++|.+++|.+++. +|||..|+
T Consensus 86 -~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 86 -AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILA 162 (382)
T ss_pred -HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence 3445678999999999999999888889888887665 4678999999999999999999887765 49999998
Q ss_pred HHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHH
Q psy4866 224 YSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFV 303 (537)
Q Consensus 224 ~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (537)
+.++..++..+. +.++|+++ +++ ++ + .++.+.....++++|++..+...
T Consensus 163 ~~~~~~~~~~~~-~~~~~~~~----~~~-------------~~--~-----------~~~~~~~~~~~~~l~~~~~~~~l 211 (382)
T TIGR00902 163 ILTAGLAFMLIG-FLIKPTIP----PKD-------------AI--P-----------EDESQGDSAFIALLKNPMNLRFL 211 (382)
T ss_pred HHHHHHHHHHHH-HHcCCCCC----CCc-------------cc--c-----------ccccccchhHHHHHcChHHHHHH
Confidence 876553333333 33333310 000 00 0 00000122345666655544444
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 304 FMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
+..++.. ........+.|.++++.|.+. ..+....+..+..+++.++.+++.||++.|+.+.++.+...+....+
T Consensus 212 ~~~~l~~----~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~ 287 (382)
T TIGR00902 212 AAVCLIQ----GAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAII 287 (382)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 3333322 234556667788888777653 34455666778888899999999999999999999988888887766
Q ss_pred HHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHH-HHHHHHHHHHHHHHHHH
Q psy4866 383 GLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINI-LCTTLGLISYKLFFLMD 461 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~-~~~~g~~~~~~~~g~l~ 461 (537)
... ++.+..+....+.+..++..... ...++.+. |++.++++.++.+. ...+|.++++.+.|++.
T Consensus 288 ~~~------------~~~~~~~~~q~l~g~~~~~~~~~-~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~ 353 (382)
T TIGR00902 288 GAI------------EAFPLIFLLQILHCGTFAVCHLA-AMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIY 353 (382)
T ss_pred HhH------------hhHHHHHHHHHHHHHHHHHHHHH-HHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 542 33455566667777777765544 44788887 88899999999874 56799999999999999
Q ss_pred HhhccchhhhHhhHHHHHHHHH
Q psy4866 462 KHIGMYSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 462 ~~~g~~~~~~~~~~~~~~~~~~ 483 (537)
|+.|. ..|++.+++.+++.++
T Consensus 354 ~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 354 PTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HhccH-HHHHHHHHHHHHHHHH
Confidence 99986 5677777777665443
No 75
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.96 E-value=3.8e-27 Score=233.52 Aligned_cols=366 Identities=12% Similarity=0.056 Sum_probs=223.1
Q ss_pred hhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHH---HHhh
Q psy4866 80 MSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAM---YSRS 156 (537)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~---~~~~ 156 (537)
+..+...+.+|.+.++ ++|+|..+.|++.+++.++..++++++|+++||+|||++++++..+.+++..... .++.
T Consensus 24 ~~~~~~~~~~~~~l~~--~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (420)
T PRK09528 24 FIWSSWFSFFPIWLHD--INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPL 101 (420)
T ss_pred HHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566777666552 5999999999999999999999999999999999999999887666555433221 1111
Q ss_pred HH-HHHHHHHHHHhHhhhhhhhhhhhhhccCC--CcccchhhhHhHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHH
Q psy4866 157 VL-GLYVMRTLQGFSMAAIYVISPMYLGEISE--TSIRGTIGTLFQISCHLGILYTYVLGSEL---SYMNYLTYSLIIPI 230 (537)
Q Consensus 157 ~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~i~~~l~~~~---~wr~~~~~~~~~~~ 230 (537)
.. ..+.+.++.++..+.........+.++.+ .+++++.++......++|..+++.+++.+ +|++.|++.+++++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~ 181 (420)
T PRK09528 102 LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSAL 181 (420)
T ss_pred HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHH
Confidence 11 01122223333333333333333333332 34567788888888888888888887764 89999999888877
Q ss_pred HHHHHhhcc-cCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHH
Q psy4866 231 IFTVTFMFM-PESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLA 309 (537)
Q Consensus 231 ~~~~~~~~~-~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (537)
+..+..+++ +|.++... .. ++ + +..++.......++.+|++..+...+.....
T Consensus 182 ~~~~~~~~~~~~~~~~~~-~~--~~-----------~------------~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~ 235 (420)
T PRK09528 182 ILLVLLFFAKPDAPSTAK-VA--NA-----------L------------GANASAVSLKDALALLKLPKFWFLVLYVIGV 235 (420)
T ss_pred HHHHHHhcccccccchhh-hc--cc-----------h------------hcccccccHHHHHHHccCCCeEeehHHHHHH
Confidence 766555554 33321000 00 00 0 0000000011223444444333222222222
Q ss_pred HHHHhhhHHHHHHHHHHHHHh----cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHH
Q psy4866 310 VFRAFTGVQSIIAYANTIFAS----SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGL 384 (537)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 384 (537)
... +.....+.|.++.+ .+.+. ..+....+..+..+++.++.|++.||+++|+.+..+.++.++..+++.+
T Consensus 236 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~ 311 (420)
T PRK09528 236 ACF----YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF 311 (420)
T ss_pred HHH----HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh
Confidence 111 11222233333332 22221 2235556667778899999999999999999988888877776666554
Q ss_pred HHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHH-HHHHHHHHHHHHHHHHHHHHHh
Q psy4866 385 YYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAV-INILCTTLGLISYKLFFLMDKH 463 (537)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~g~l~~~ 463 (537)
. .+.+..+....+.+....... +....+..|.+|++.+++..+. .+....+|.++++.+.|++.|.
T Consensus 312 ~------------~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~ 378 (420)
T PRK09528 312 A------------TGPLEVSILKLLHAFEVPFLL-VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS 378 (420)
T ss_pred c------------ccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 223333333344444333322 2334677888999999888766 6777899999999999999999
Q ss_pred hccchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 464 IGMYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 464 ~g~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
.|++.+|.+.+++.++..++.+...++
T Consensus 379 ~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 379 IGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999998888877776666555443
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=3.1e-27 Score=232.56 Aligned_cols=369 Identities=13% Similarity=0.103 Sum_probs=241.4
Q ss_pred Hhhhhhhhhhccchhh-HHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhh-hHHHHHHHHHHHHHHHH
Q psy4866 73 IAAFTTGMSFAWSAPV-LEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGR-KWSLLMTGPITTASWII 150 (537)
Q Consensus 73 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~l~~~~~~~ 150 (537)
+..|++....+...|. .+.+.+ ++|++..|+|++.+++.++..++++++|+++||+|| |+++.++.++..++..+
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~---~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSK---TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 3344445555555444 455556 799999999999999999999999999999999965 88889889888888888
Q ss_pred HHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhh--------ccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----hH
Q psy4866 151 AMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLG--------EISETSIRGTIGTLFQISCHLGILYTYVLGSEL----SY 218 (537)
Q Consensus 151 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~w 218 (537)
..+.++++.+++.|++.|++.+...+...++.. |......|.+..+. +|.++++.+++.+ .|
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~~~~~ 159 (418)
T TIGR00889 86 AAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLLDIELSN 159 (418)
T ss_pred HHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHhcccchh
Confidence 899999999999999999987777766655432 22323345555552 4455555555443 34
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccch
Q psy4866 219 MNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSN 298 (537)
Q Consensus 219 r~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (537)
+ +|++.++..++..+..+++||+|+- +++ ++.+.. + ..+.+.++++|++.
T Consensus 160 ~-~f~~~~~~~~~~~~~~~~~~e~~~~---~~~--------------~~~~~~-------~-----~~~~~~~~~~k~~~ 209 (418)
T TIGR00889 160 I-QLYITAGSSALLGVFALTLPDIPVA---KST--------------AKMSIK-------V-----MLGLDAFILFKNKR 209 (418)
T ss_pred H-HHHHHHHHHHHHHHHHhcCCCCCCC---ccc--------------cccCHH-------H-----HhhhhHHHHhcCCC
Confidence 4 3555565555555556678887520 000 000000 0 00112234455443
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCC---------CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHH
Q psy4866 299 MKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETF---------LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFL 369 (537)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 369 (537)
.+..++..++... .......+.+.++++.+.+ ...+....+..+..+++.++.+++.||+|+|+.+.
T Consensus 210 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~ 285 (418)
T TIGR00889 210 MAIFFFFSMLLGA----PLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVML 285 (418)
T ss_pred eeeHHHHHHHHHh----HHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 3333333222221 1223445556666665432 12346666677888899999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHH-HHHHH
Q psy4866 370 VSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVIN-ILCTT 448 (537)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~ 448 (537)
.+.++.++...++.... .. ....+..++..++.+.+.+.. .+....++.|.+|++.|++++|+.+ ....+
T Consensus 286 ~~~~~~~v~~~l~~~~~--~~------~~~~~~l~l~~~l~g~~~~~~-~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~l 356 (418)
T TIGR00889 286 LSLVAWALRFGFFAYGD--PE------YFGYALLFLSMIVYGCAFDFF-NISGSVFVEKEVPVHIRASAQGLFTLMCNGF 356 (418)
T ss_pred HHHHHHHHHHHHHHHcC--cc------hhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh
Confidence 98888777765554410 00 001122233344455554433 3444578899999999999999997 56789
Q ss_pred HHHHHHHHHHHHHHhh------ccchhhhHhhHHHHHHHHHHHhhccCCCC
Q psy4866 449 LGLISYKLFFLMDKHI------GMYSNFLFGGVSSLVCTVYLYYFLLETKG 493 (537)
Q Consensus 449 g~~~~~~~~g~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (537)
|.+++|.+.|.+.++. ||+..|.+.+++.+++.++.+++.+++++
T Consensus 357 g~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 357 GSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999999984 47778888888888888887777776543
No 77
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=2.7e-27 Score=230.81 Aligned_cols=336 Identities=13% Similarity=0.085 Sum_probs=221.4
Q ss_pred hhhhhhhhccchhhHHh-hhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVLEE-LLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMY 153 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~ 153 (537)
.+..........+.+|. +.+ ++|+|..+.+++.+++.++..++++++|+++||+|||++++++.++..++.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~ 86 (366)
T TIGR00886 10 FFLSFSVWFAFSPLAVQMIKD---DLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGL 86 (366)
T ss_pred HHHHHHHHHHhHHhhhHHHHH---HhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 33334455567888885 878 99999999999999999999999999999999999999999999999999999999
Q ss_pred Hh-hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh----hh----------hhH
Q psy4866 154 SR-SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG----SE----------LSY 218 (537)
Q Consensus 154 ~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~----~~----------~~w 218 (537)
++ +++.+++.|+++|++.+. .+....++.|++|+++|++++++.....++|..+++.++ .. .+|
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w 165 (366)
T TIGR00886 87 AVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAW 165 (366)
T ss_pred HhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 99 999999999999999654 566788999999999999999998866666665554443 32 279
Q ss_pred HHHH-HHHHHHHHH-HHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhcc
Q psy4866 219 MNYL-TYSLIIPII-FTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGR 296 (537)
Q Consensus 219 r~~~-~~~~~~~~~-~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (537)
|+.| +..++...+ ..+...+.+|+|+. +.++.+.. ..+.. .. ..++.....++.+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---~~~~~-~~------------~~~~~~~~~~~~~~~ 224 (366)
T TIGR00886 166 GWAFVIVPAGILLLPALLIFFVGADTPPG-----KPATGKLS---FKGAR-WS------------VGTGALGDQLKVFRD 224 (366)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCCcc-----cccchhcc---ccccc-cc------------ccchhHHHHHHHHhc
Confidence 9998 443444433 34444556766521 00000000 00000 00 000000123344443
Q ss_pred chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHH
Q psy4866 297 SNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAG 374 (537)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 374 (537)
+..+...+... ........+..+.|.++++. +.+. ..+....+..+..++++++.|++.||+++|+.+..+...
T Consensus 225 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~ 300 (366)
T TIGR00886 225 RHTWILALLYS----VTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLG 300 (366)
T ss_pred cchhhHHHHHH----HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHH
Confidence 33332222222 22222445666777777654 5442 344566677888899999999999999999887777666
Q ss_pred HHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHH
Q psy4866 375 CSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTL 449 (537)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 449 (537)
...+..++..... . +...+.......+...+.+.+.. ..+....+..| +++|+++|+.+..+++|
T Consensus 301 ~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 301 VAMGAFLVVLGLV--S------PLSLAVFIVLFVALFFFSGAGNG-STFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHhcCC--C------cchHHHHHHHHHHHHHHhccccc-hhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 6555554443210 0 00222223333344444444433 34577788887 57999999999888765
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=3.5e-26 Score=224.88 Aligned_cols=364 Identities=13% Similarity=0.076 Sum_probs=234.7
Q ss_pred hhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHH---
Q psy4866 75 AFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIA--- 151 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~--- 151 (537)
.++.....+...|.+|.+..+ ++|.+..+.|++.+++.++..+++++.|+++||+|||+.++.+.+..+++....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~--~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 88 (396)
T TIGR00882 11 FFLYFFIMSAYFPFFPIWLHD--VNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIY 88 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555677777776542 689999999999999999999999999999999999999998776665544322
Q ss_pred HHH-----hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh---hhHHHHHH
Q psy4866 152 MYS-----RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE---LSYMNYLT 223 (537)
Q Consensus 152 ~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~---~~wr~~~~ 223 (537)
.+. +.+..+++.|++.|++.+...+....+..|..+ +++...+......++|.++++.+++. .+||..|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~ 166 (396)
T TIGR00882 89 VFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFW 166 (396)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHH
Confidence 111 123445667888998888888888777766532 34556667667777888888777765 48999999
Q ss_pred HHHHHHHHHHHHhhc-ccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHH
Q psy4866 224 YSLIIPIIFTVTFMF-MPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAF 302 (537)
Q Consensus 224 ~~~~~~~~~~~~~~~-~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (537)
+.+++.++..+..+. .||+|.. ++.. +..+..+++++..+.++++|++..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 220 (396)
T TIGR00882 167 LGSGFALILMLLLMFAKPKAPSS-------ATVA-------------------NALGANASAFSLKLALELFRQRKFWMF 220 (396)
T ss_pred HHHHHHHHHHHHHHHhCCCCchh-------hhhh-------------------cccccccCCCCHHHHHHHHcCCcHHHH
Confidence 988887775544444 4444310 0000 000000001112234566665544333
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhc----CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHH
Q psy4866 303 VFMAFLAVFRAFTGVQSIIAYANTIFASS----ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSL 377 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 377 (537)
.+...... ..+.....+.+.+++.. +.+. ..+....+..+...++.+..+++.||+++|+.+.++.++.++
T Consensus 221 ~l~~~~~~----~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l 296 (396)
T TIGR00882 221 VLYVVGVA----CVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 22222211 11223333445554443 2221 123455556677888889999999999999998888877777
Q ss_pred HHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHH-HHHHHHHHHHHHHHH
Q psy4866 378 FSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAV-INILCTTLGLISYKL 456 (537)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~ 456 (537)
...+.... .+.+...+...+.+.+..... .....+..+..|++.++++.+. .+....+|+++++.+
T Consensus 297 ~~~~~~~~------------~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l 363 (396)
T TIGR00882 297 RIIGSSFA------------TTALEVVILKMLHAFEVPFLL-VGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTL 363 (396)
T ss_pred HHHHHHhc------------CChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHh
Confidence 66554331 233333444444444433221 2233456777788888887776 678899999999999
Q ss_pred HHHHHHhhccchhhhHhhHHHHHHHHHHH
Q psy4866 457 FFLMDKHIGMYSNFLFGGVSSLVCTVYLY 485 (537)
Q Consensus 457 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 485 (537)
.|++.|..|+..+|.+.+++.++..+...
T Consensus 364 ~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 364 AGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999899888888777766543
No 79
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=5.4e-26 Score=222.20 Aligned_cols=350 Identities=10% Similarity=0.004 Sum_probs=238.3
Q ss_pred hhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhh----HHHHHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRK----WSLLMTGPITTASWII 150 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr----~~l~~~~~l~~~~~~~ 150 (537)
.+...+..+...|.+|.+.+ ++|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. ....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~---~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK---GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH---hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHH
Confidence 34444566788999999999 9999999999999999999999999999999999984 3333332222 2233
Q ss_pred HHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHH
Q psy4866 151 AMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSL 226 (537)
Q Consensus 151 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~ 226 (537)
...+++++.+++.|++.|++.+...+...+++.++ +++|+++.+......++|.+++|.+++. ++||..|++.+
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~ 165 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILT 165 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 44468899999999999999998889888887776 3557888888888888888888888865 49999998877
Q ss_pred HHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHH
Q psy4866 227 IIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMA 306 (537)
Q Consensus 227 ~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (537)
+..++..+..++.||.++ +++ + + .+.++...++++++|++..+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~--------------~------~-------~~~~~~~~~~~~i~~~~~~~~~~~~~ 214 (382)
T PRK11128 166 AGVASMLLGQLLRPTIMP----QGE--------------S------R-------QQESAGWPAWKALLKEPTVWRFLLCV 214 (382)
T ss_pred HHHHHHHHHHHccCCCCC----ccc--------------c------c-------cccccccchHHHHHcChhHHHHHHHH
Confidence 655544444444454310 000 0 0 00000123456777665544443333
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHH
Q psy4866 307 FLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLY 385 (537)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (537)
++.... ......+.+.+.++.+.+. ..+....+..+..++..++.+++.||+++|+.+..+.++.++..+.+...
T Consensus 215 ~l~~~~----~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T PRK11128 215 SLLQGS----HAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST 290 (382)
T ss_pred HHHHHH----hHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 333222 3344556677777766653 33455556677888888999999999999999888887777766555432
Q ss_pred HHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHH-HHHHHHHHHHHHHHHHHHHhh
Q psy4866 386 YYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVIN-ILCTTLGLISYKLFFLMDKHI 464 (537)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~~ 464 (537)
++.+..++..++.+.+.+.... ....+..+. +++++++..++.+ ....+|..++|.+.|.+.|..
T Consensus 291 ------------~~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 291 ------------TALPWLIVIQILHCGTFTVCHL-AAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2344455556666666555433 344666665 5556788888886 445677799999999999998
Q ss_pred ccchhhhHhhHHHHHHH
Q psy4866 465 GMYSNFLFGGVSSLVCT 481 (537)
Q Consensus 465 g~~~~~~~~~~~~~~~~ 481 (537)
|+. .++..+++.+++.
T Consensus 357 g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 357 GAG-VFWVMALVALPAL 372 (382)
T ss_pred cHH-HHHHHHHHHHHHH
Confidence 874 5655555555443
No 80
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=9.1e-26 Score=222.23 Aligned_cols=361 Identities=15% Similarity=0.134 Sum_probs=241.1
Q ss_pred HhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhh-----hhhH-HHHHHHHHHHH
Q psy4866 73 IAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRI-----GRKW-SLLMTGPITTA 146 (537)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~l~~~ 146 (537)
...+..|+..+.....+|.+.+ +.|+|.+++|++..+... .+..+++|+++||+ |||| ++.++.++.++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~---~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMT---VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 3467788899999999999999 889999999999777776 59999999999999 8765 78888888888
Q ss_pred HHHHHHHH---hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh-----hhH
Q psy4866 147 SWIIAMYS---RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE-----LSY 218 (537)
Q Consensus 147 ~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-----~~w 218 (537)
+..+.++. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.. ++|
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW 160 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH
Confidence 88887776 3577788888888998899999999999999999999999999999999999998876543 489
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccch
Q psy4866 219 MNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSN 298 (537)
Q Consensus 219 r~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (537)
|..|++.++..++..+..+++||+++. +++ . ++..+ +.+..++++++++.
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~e~~~~---~~~--------------~-~~~~~------------~~~~~~~~l~~~~~ 210 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAPEPEVP---ARP--------------P-RSLGE------------AVVGPLRDFFSRRG 210 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccc---ccc--------------c-chhHH------------HHHHHHHHHHhCcC
Confidence 999999888876665555667776421 000 0 00000 00223455666655
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCC-hhHHHHHH-HHHHHHHhhhHhhhhcccCCcHHHHHhhHHHH
Q psy4866 299 MKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLP-SDYISILF-AIILLVSIFPSTYYIDRAGRRVLFLVSSAGCS 376 (537)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 376 (537)
.+..++...+....... ......+.+.++.|.+.. .+...... .++.+++.++++++.||+++|+.+..+..+..
T Consensus 211 ~~~~l~~~~l~~~~~~~---~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~ 287 (402)
T PRK11902 211 AWALLLLIVLYKLGDAF---AGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQA 287 (402)
T ss_pred HHHHHHHHHHHHhHHHH---HHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 55444433333222111 111222333344555422 22333233 34578899999999999999988776666655
Q ss_pred HHHHHHHHHHHhhhccccCCcccchhhHHHHHH----HHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHH
Q psy4866 377 LFSFIAGLYYYVTIELQYEIPYTSWVPFLSISL----LGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLI 452 (537)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 452 (537)
+..+.+...... +++.+.......+ .+...+ ...+....++.+.+|.+ ..++.+....++..+
T Consensus 288 l~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~ 354 (402)
T PRK11902 288 VSNLGYWVLAVT--------PKHLWTMALAIGIENLCGGMGTA-AFVALLMALCNRSFSAT----QYALLSALASVGRVY 354 (402)
T ss_pred HHHHHHHHHHhc--------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHH
Confidence 544333221110 1122322222222 112222 22333445666666644 456666666778877
Q ss_pred HHHHHHHHHHhhccchhhhHhhHHHHHHHHHH
Q psy4866 453 SYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 453 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 484 (537)
++.+.|.+.|..|+...|.+.+++++++.++.
T Consensus 355 ~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 355 VGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 77789999999999988888877777765554
No 81
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.2e-25 Score=202.24 Aligned_cols=357 Identities=15% Similarity=0.149 Sum_probs=272.2
Q ss_pred HHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHH
Q psy4866 69 VTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASW 148 (537)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~ 148 (537)
+.++...|+.|+......+++|.+++ .|+++..|.+++..+++.|+.+++++.|++.+|+|+|+.+++|+.++++++
T Consensus 16 v~~t~lFfl~G~~~~l~diLip~l~~---~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 16 VLLTSLFFLWGFITCLNDILIPHLKE---VFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHH---HhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 44555578889999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHH---HHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh---------
Q psy4866 149 IIAM---YSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL--------- 216 (537)
Q Consensus 149 ~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~--------- 216 (537)
.+.. ...+|..++++-|+.|.|.+...+.++.+++...++++..+.+++.+...++|.+++|++++.+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 9984 5668999999999999999999999999999999998889999999999999999999998652
Q ss_pred --------------hHHHHHHHHHHHHHHHHHHhhc--ccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHh
Q psy4866 217 --------------SYMNYLTYSLIIPIIFTVTFMF--MPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQN 280 (537)
Q Consensus 217 --------------~wr~~~~~~~~~~~~~~~~~~~--~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (537)
.|+++|...+...++..+.... .|+.+. + +.
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~----------------------------~-----~~ 219 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV----------------------------A-----AP 219 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc----------------------------c-----cc
Confidence 3677777777666655544433 343310 0 00
Q ss_pred hhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhh
Q psy4866 281 TSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYY 358 (537)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l 358 (537)
...+..+....+++++++.+...+..+++.. .......|++.++.+ .+.+. ++....+.+..+.++|++++.++
T Consensus 220 ~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG----~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~l 295 (422)
T COG0738 220 SLGASGSAGLSSLFQNKHLRLGVLAIFLYVG----AEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSAL 295 (422)
T ss_pred cccccccchHHHHHhChHHHHHHHHHHHHHh----HHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001111145667766665554444444443 466777888888887 45443 45578888899999999999999
Q ss_pred hcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchh
Q psy4866 359 IDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVS 438 (537)
Q Consensus 359 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 438 (537)
..|+...|.+....++..+.++...+. +....+....+.+.+.+..+ |..++...+..| ++ ...
T Consensus 296 m~~~~~~k~Laf~a~~~ill~~~~~l~-------------~g~v~~~~l~~ig~F~simf-PTIfslal~~l~-~~-ts~ 359 (422)
T COG0738 296 MSRIKPEKYLAFYALIAILLLLAVALI-------------GGVVALYALFLIGLFNSIMF-PTIFSLALKNLG-EH-TSV 359 (422)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHh-------------cChHHHHHHHHHHHHhHHHH-HHHHHHHHhccC-cc-ccc
Confidence 999999888887776666655555553 23555666667777766655 555688888888 43 334
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHH
Q psy4866 439 CAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCT 481 (537)
Q Consensus 439 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 481 (537)
.|..-...-+|+++.|++.|++.|+.|....+......|.+..
T Consensus 360 ~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 360 GSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred cceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 4445555678999999999999999998877665555555554
No 82
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=5.4e-25 Score=217.09 Aligned_cols=377 Identities=10% Similarity=0.072 Sum_probs=229.7
Q ss_pred HHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHH
Q psy4866 66 FLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITT 145 (537)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~ 145 (537)
..+...++......+.....+.+++.+.. |+|- .....|+.+.+.++.+++.++.|+++|.||||.+++.+.++..
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~a~~l~~I~~---diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~v 119 (599)
T PF06609_consen 44 ASFAAFSLAVIAAYFVLVLPASILPYINA---DIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGV 119 (599)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHH---hcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHH
Confidence 33333444444444555566778889988 8985 4678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----hHHHH
Q psy4866 146 ASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL----SYMNY 221 (537)
Q Consensus 146 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~ 221 (537)
+|+++++.++|...++++-.+.|+|.|.... ....++|..|.|.|.....+...........++.++..+ +|||.
T Consensus 120 vG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~ 198 (599)
T PF06609_consen 120 VGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWI 198 (599)
T ss_pred hHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchH
Confidence 9999999999999999999999999877764 566689999999998877776655555444556666443 79999
Q ss_pred HHHHHHHHHHHHHHhhcccCChHHHHHhCCH---HHHHHHHHhhc-------------------CC-ChhhHHHHHHHH-
Q psy4866 222 LTYSLIIPIIFTVTFMFMPESPYFYAIKNQE---GKAIESLKWLR-------------------NK-TADQVQSELQII- 277 (537)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~---~~a~~~~~~~~-------------------~~-~~~~~~~~~~~~- 277 (537)
|++.++...+.++..+++...|++-..+++. .+..+.++++. .. .+.+...-....
T Consensus 199 ~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lv 278 (599)
T PF06609_consen 199 FYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLV 278 (599)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHH
Confidence 9999988766543332221223222222211 12122221111 00 000000000000
Q ss_pred -----------HHhhhhcccccchHHhhcc-chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC----ChhHH
Q psy4866 278 -----------KQNTSKNVERTNFREFMGR-SNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL----PSDYI 340 (537)
Q Consensus 278 -----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~ 340 (537)
-+.....++.--..+++++ +.+...++..++... .++....+.|..... .+.+. ...+.
T Consensus 279 iG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~----~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~ 354 (599)
T PF06609_consen 279 IGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGM----NFFSVNILWPQQVVNVFGSDPISITEIGWI 354 (599)
T ss_pred HHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhccCCCcccceeehh
Confidence 0000000111122345553 222222222222221 133443444443332 22221 23456
Q ss_pred HHHHHHHHHHHhhhHhhhhcccCCcHHH-HHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccc
Q psy4866 341 SILFAIILLVSIFPSTYYIDRAGRRVLF-LVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFG 419 (537)
Q Consensus 341 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (537)
....+++..++.++.|.+..++++-|.. +++.+++.+++.+++... +++....+...++.+.+.+....
T Consensus 355 s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~----------~~n~~~~i~~~~l~g~giG~~~~ 424 (599)
T PF06609_consen 355 SSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR----------PDNKNAAIAFLVLAGFGIGGILV 424 (599)
T ss_pred hhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc----------CCCcchHHHHHHHHHHhHHHHHH
Confidence 6677888888888899999888765544 455555554444443321 12222233444444555444433
Q ss_pred cchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 420 PLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK 462 (537)
Q Consensus 420 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 462 (537)
+ ....+.-..|++..|++.|+...++.+|+.++..++..+..
T Consensus 425 ~-~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 425 P-AIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred H-HHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3 33555666899999999999999999999999888866553
No 83
>KOG3764|consensus
Probab=99.95 E-value=4.9e-28 Score=218.69 Aligned_cols=374 Identities=14% Similarity=0.082 Sum_probs=265.6
Q ss_pred HHHHHHHHhhhhhhhhhccchhhHHhhhcCCC-----------------------------------------------C
Q psy4866 66 FLCVTACIAAFTTGMSFAWSAPVLEELLSKES-----------------------------------------------P 98 (537)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~ 98 (537)
+++..++.+.+.+.+..+...|.+|.+..+.. +
T Consensus 21 lilviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~ 100 (464)
T KOG3764|consen 21 LILVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAIS 100 (464)
T ss_pred eEEEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccC
Confidence 34555666777777777777777776654221 3
Q ss_pred CCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhh
Q psy4866 99 IPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVIS 178 (537)
Q Consensus 99 ~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 178 (537)
.+-+++++|++.+++.+.+.+..++.|.+.||+|+|..+++|++++..+++++++.++|+++++.|.+||+|.+...++.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 34556789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCcc-cchhhhHhHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHH
Q psy4866 179 PMYLGEISETSI-RGTIGTLFQISCHLGILYTYVLGSEL----SYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEG 253 (537)
Q Consensus 179 ~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~ 253 (537)
.++++|.+|+++ |++++|+.-.+.++|.++||.+|+.+ |.+.+|++.+++.++-..+.+++-|.-
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~---------- 250 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT---------- 250 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcc----------
Confidence 999999998765 79999999999999999999999774 899999999999988776665542220
Q ss_pred HHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCC
Q psy4866 254 KAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSET 333 (537)
Q Consensus 254 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (537)
+.+.+...+..+++++++.+..+ ...........+....---++..+.+.-.
T Consensus 251 ------------------------~~~~~~~~~~~~~~~Ll~dP~I~----~~agai~~~n~~lafLePtlslwm~e~m~ 302 (464)
T KOG3764|consen 251 ------------------------EMDPDSTEQGTPMWSLLMDPYIL----LIAGAITFSNSSLAFLEPTLSLWMLETMF 302 (464)
T ss_pred ------------------------ccCccccccCccHHHHHhCchHh----hhhcchhhccchHHHhCcccHHHHHHhcc
Confidence 00000122245567777655532 22222222222222222233333333322
Q ss_pred C--CChhHHHHHHHHHHHHHhhhHhhhhcccC--CcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHH
Q psy4866 334 F--LPSDYISILFAIILLVSIFPSTYYIDRAG--RRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISL 409 (537)
Q Consensus 334 ~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (537)
. ...+..++...+..+++..+.|.+.||++ |......+.+..+++.....+.. . -...|.......+
T Consensus 303 ~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~--~-------~~~L~vp~~~l~~ 373 (464)
T KOG3764|consen 303 TPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT--S-------IAQLWVPNFGLGF 373 (464)
T ss_pred CCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh--h-------HHHHhhhhHHHHH
Confidence 1 14456677788899999999999999999 43333334433333333332221 0 0123444444444
Q ss_pred HHHHHhhccccchhhhccccCCcc---ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHh
Q psy4866 410 LGVFFNLGFGPLFTPLLSEYFSSN---MKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYY 486 (537)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 486 (537)
.+........|.. .++.+.-..+ ..|...++......+|.++||.+.|.+.+..|+.|...+.+...++..-++.+
T Consensus 374 ~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 374 GIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred HHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555544 5555544333 67899999999999999999999999999999999888888888877766544
Q ss_pred h
Q psy4866 487 F 487 (537)
Q Consensus 487 ~ 487 (537)
+
T Consensus 453 l 453 (464)
T KOG3764|consen 453 L 453 (464)
T ss_pred H
Confidence 3
No 84
>PTZ00207 hypothetical protein; Provisional
Probab=99.95 E-value=3.5e-25 Score=220.09 Aligned_cols=406 Identities=11% Similarity=0.074 Sum_probs=263.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHH
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGP 142 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 142 (537)
++|..++.........+..++ .+...|.+++ ++|+|..+++++.++. .....++++.|++.||+|||++++++.+
T Consensus 25 ~Rw~~lva~~~~~~~~g~~y~-fsv~s~~L~~---~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~l 99 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSFMYA-FNLISGAMQA---RYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMT 99 (591)
T ss_pred chHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH---HhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 344444444444444444433 3456678888 9999999999998874 4456778889999999999999999999
Q ss_pred HHHHHHHHHHHH------hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHH-HHHHhhh
Q psy4866 143 ITTASWIIAMYS------RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILY-TYVLGSE 215 (537)
Q Consensus 143 l~~~~~~~~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i-~~~l~~~ 215 (537)
++++++++++++ ++++.+++.|++.|+|.+...+.+...+.+|+| ++||++.++...+.++|.++ +++....
T Consensus 100 l~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 689999999999999999999999999999996 67999999999999999976 4444444
Q ss_pred h--hHHHHHHHHHHHHHHHHHH-hhc--ccCChHHHHHhCCHHHHHHHHHhhcCCCh-----------------------
Q psy4866 216 L--SYMNYLTYSLIIPIIFTVT-FMF--MPESPYFYAIKNQEGKAIESLKWLRNKTA----------------------- 267 (537)
Q Consensus 216 ~--~wr~~~~~~~~~~~~~~~~-~~~--~~esp~~l~~~~~~~~a~~~~~~~~~~~~----------------------- 267 (537)
+ +|+..|++.++++++..++ .++ .|+.|+|..++++.+++++..++.++..-
T Consensus 179 ~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~y 258 (591)
T PTZ00207 179 FSDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVF 258 (591)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHH
Confidence 4 7888888888887664433 333 46666665555444444333222111100
Q ss_pred --------------h----------------------------------hHHHHHHHH-H------Hhh--------h-h
Q psy4866 268 --------------D----------------------------------QVQSELQII-K------QNT--------S-K 283 (537)
Q Consensus 268 --------------~----------------------------------~~~~~~~~~-~------~~~--------~-~ 283 (537)
+ +.+.+..+. + +.. + .
T Consensus 259 l~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (591)
T PTZ00207 259 LPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYI 338 (591)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCC
Confidence 0 000000000 0 000 0 0
Q ss_pred -cccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCCCh--h-HHHHHHHHHHHHHhhhHhhh
Q psy4866 284 -NVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFLPS--D-YISILFAIILLVSIFPSTYY 358 (537)
Q Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~-~~~~~~~~~~~~~~~~~g~l 358 (537)
+....++.+.+++.. +|+.++.+++..+....+...+.++.+.. |...+. . ....+.++++.+|++..|++
T Consensus 339 ~P~~~~t~~q~l~~~d----~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~ 414 (591)
T PTZ00207 339 APQFQETFIEGLKTAR----LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYF 414 (591)
T ss_pred CCCCcchHHHHHhchh----HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHH
Confidence 000113333333333 44555555555555556666667777776 552222 2 36788899999999999988
Q ss_pred hcccCCc--------HHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccC
Q psy4866 359 IDRAGRR--------VLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYF 430 (537)
Q Consensus 359 ~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (537)
.....+| ...+....++.++.+++.+. .+.....+..++.+++++..+. +....++|+|
T Consensus 415 ~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~------------~p~~~L~~~~~lvg~~~G~~~~-~~~~i~selF 481 (591)
T PTZ00207 415 EIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLT------------LPKAALPLPYFIAAFANGFMAA-TIALVTRTIF 481 (591)
T ss_pred HHHHHhhccccccchhHHHHHHHHHHHHHHHHHHH------------CCccHhHHHHHHHHHHhhHhHH-HHHHHHHHHh
Confidence 7222221 22222222244444444432 1113456667777777777664 4558999999
Q ss_pred CccccchhhHHHHHHHHHHHHHH-HHHHHHHHHhhc-------------cchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 431 SSNMKAVSCAVINILCTTLGLIS-YKLFFLMDKHIG-------------MYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 431 p~~~~~~~~g~~~~~~~~g~~~~-~~~~g~l~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
. ++-|+-.-+.....-+|+.+. -.+.|.++|+-. ++.+|+++++++++++++...+.-+++
T Consensus 482 g-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 482 A-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred c-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence 9 777888777777777777766 567888887532 345788999999988888765554544
No 85
>KOG2504|consensus
Probab=99.95 E-value=1.9e-26 Score=227.69 Aligned_cols=395 Identities=16% Similarity=0.174 Sum_probs=275.3
Q ss_pred HHHHHHHHHh-hhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHH
Q psy4866 65 SFLCVTACIA-AFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPI 143 (537)
Q Consensus 65 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l 143 (537)
|.+++...+. .+.+|+... .+...+.+++ +++.+.++++|+.++......+..++.+.+.||+|.|++.+.|.++
T Consensus 45 WvV~~a~fl~~~~~~g~~~~-~Gv~~~~~~~---~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINS-FGLLFEELMD---YFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred eeeeHhHHHHHHhhhcchhe-ehhhHHHHHH---HhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 4444444333 233443333 4477889999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHH-HHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhH
Q psy4866 144 TTASWIIAMYSRSVLGLYV-MRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSY 218 (537)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~w 218 (537)
..+|.++.++++++|++++ .-++.|+|.|+.+.....++..|| +++|+.+.++..++.++|.++-|.+... +||
T Consensus 121 ~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~ 199 (509)
T KOG2504|consen 121 AALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGW 199 (509)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCc
Confidence 9999999999999988876 479999999999999999999888 4579999999999999999988877765 499
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-cCChHHHHHhCCHHHHHHHHHhhcC------------CChhhHH---HHHHHHHHhhh
Q psy4866 219 MNYLTYSLIIPIIFTVTFMFM-PESPYFYAIKNQEGKAIESLKWLRN------------KTADQVQ---SELQIIKQNTS 282 (537)
Q Consensus 219 r~~~~~~~~~~~~~~~~~~~~-~esp~~l~~~~~~~~a~~~~~~~~~------------~~~~~~~---~~~~~~~~~~~ 282 (537)
|+.+++.+.+.+-.++....+ |.+++.... ..+..+......+ ++....+ .+.++.++..+
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRPLSPPKKPN---EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPD 276 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCCCch---hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCc
Confidence 999998888876555444433 323211000 0000000000000 0000000 00011111111
Q ss_pred hc---ccccch----HHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhh
Q psy4866 283 KN---VERTNF----REFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFP 354 (537)
Q Consensus 283 ~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 354 (537)
+. ..+... .+++++ +.++...+.......++.....++|.+....+... ++.....+.++..++++++
T Consensus 277 ~~~~~~~~~~~~~~d~~ll~~----~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~ 352 (509)
T KOG2504|consen 277 KWRNSPLQAFLSMLDLSLLKD----PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRII 352 (509)
T ss_pred cccccchhhhhhhhhHHHHcC----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhh
Confidence 00 111111 344444 33555555566666678888899999999888774 5668888999999999999
Q ss_pred HhhhhcccCCcH--HHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCc
Q psy4866 355 STYYIDRAGRRV--LFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSS 432 (537)
Q Consensus 355 ~g~l~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 432 (537)
.|++.|+...++ ...++.++.+++.+.+.+. ...+.......+++...+. +..+....+.|+.+.
T Consensus 353 ~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~------------~~~~~l~~~~~~fG~~~g~-~~~l~~~i~~~~~g~ 419 (509)
T KOG2504|consen 353 LGLLADKPGIRALVLFLLTLLIAGLARLFLPFA------------TTYVGLIVFSILFGFCVGS-FSSLTPVILVDLVGL 419 (509)
T ss_pred hhhhcCccccchHHHHHHHHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCh
Confidence 999999988444 3444444444444333331 2334444445555555443 445555688999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhhhHhhHHHHHHHHHH
Q psy4866 433 NMKAVSCAVINILCTTLGLISYKLFFLMDKHIG-MYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 433 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~ 484 (537)
++-..+.|+...+..++..++|++.|.+.|..| |...|...++..+++..+.
T Consensus 420 ~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~ 472 (509)
T KOG2504|consen 420 EKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLL 472 (509)
T ss_pred hhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHH
Confidence 999999999999999999999999999999888 7777888887777776554
No 86
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=4.3e-25 Score=246.76 Aligned_cols=351 Identities=15% Similarity=0.048 Sum_probs=232.3
Q ss_pred hhHHhhhcCCCCCCCCC--ChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHH---HHhhHHHHH
Q psy4866 87 PVLEELLSKESPIPMSP--NEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAM---YSRSVLGLY 161 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s~--~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~---~~~~~~~l~ 161 (537)
.+.+.+.. +++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. .+++++.++
T Consensus 31 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 107 (1146)
T PRK08633 31 LIQNTLIK---AYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAF 107 (1146)
T ss_pred HHHHHHHH---HcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 33444444 455443 4479999999999999999999999999999999999877666555443 457899999
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-------------hHHHHHHHHHHH
Q psy4866 162 VMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-------------SYMNYLTYSLII 228 (537)
Q Consensus 162 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-------------~wr~~~~~~~~~ 228 (537)
++|+++|++.+...++..+++.|++|+++|++++++...+..+|.++++.+++.+ +|++.+.+..+.
T Consensus 108 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (1146)
T PRK08633 108 AVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLA 187 (1146)
T ss_pred HHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888664 133333333333
Q ss_pred -HHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHH
Q psy4866 229 -PIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAF 307 (537)
Q Consensus 229 -~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (537)
.++.++..+.+||+|.....+.+ ...... .......++.+++++..+..++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~------------~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAAAPEVFD-------------KKKYLF------------PKLLWRNLKLLRSDRVLWLAIIGLS 242 (1146)
T ss_pred HHHHHHHHHhcCcCCCCCCccccc-------------cccccc------------HHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 23344455567877632100000 000000 0000123344554444333333332
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHh-cCCCCC--hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHH
Q psy4866 308 LAVFRAFTGVQSIIAYANTIFAS-SETFLP--SDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGL 384 (537)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 384 (537)
+..+ .......++|.++.. .+.+.. .++......++.+++.++.+++.||+++++.+.++.++.+++.+++.+
T Consensus 243 ~~~~----~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 318 (1146)
T PRK08633 243 YFWF----ISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPT 318 (1146)
T ss_pred HHHH----HHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHH
Confidence 2222 133444556666654 355422 346667778888999999999999999988888777777666655544
Q ss_pred HHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4866 385 YYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI 464 (537)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 464 (537)
. .+.+..++..++++.+.+....+ ..+++.+..|++.||+++|+.+++.++|.++++.+.+.+.. .
T Consensus 319 ~------------~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~ 384 (1146)
T PRK08633 319 A------------PSLASVLVLFFLFGFSAGLFIVP-LNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-L 384 (1146)
T ss_pred h------------hhHHHHHHHHHHHHHHHHHhhHH-HHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 2 22334445555556555554433 45888899999999999999999999999888777665543 3
Q ss_pred cc--chhhhHhhHHHHHHHHH
Q psy4866 465 GM--YSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 465 g~--~~~~~~~~~~~~~~~~~ 483 (537)
++ ...+++.+.+.++..++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~ 405 (1146)
T PRK08633 385 GLSPAGLFYLIALVTLIGTLY 405 (1146)
T ss_pred ccCHHHHHHHHHHHHHHHHHH
Confidence 33 33444444444443333
No 87
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=2.9e-25 Score=246.98 Aligned_cols=346 Identities=12% Similarity=0.063 Sum_probs=229.4
Q ss_pred ChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhh
Q psy4866 104 NEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLM---TGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPM 180 (537)
Q Consensus 104 ~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~---~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 180 (537)
...++..+++.+++.++++++|+++||+|||+++.. ..++..+..+++...+|+++++++|+++|++.+...|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 357888999999999999999999999999997633 22233333333344589999999999999999999999999
Q ss_pred hhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHH
Q psy4866 181 YLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL----SYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAI 256 (537)
Q Consensus 181 ~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~ 256 (537)
++.+++++++|++++++.+++.++|.++||++++.+ +|++.|+..++..++.+++.+++|+++.- +...
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---- 204 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA---APDL---- 204 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC---CCCC----
Confidence 999999999999999999999999999999998774 89999866656666666666667765310 0000
Q ss_pred HHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC
Q psy4866 257 ESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFL 335 (537)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 335 (537)
....... .+ ....++.+.+++..+...+...+..+. ...+..++|.++.+. +.+.
T Consensus 205 --------~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~~~ 260 (1140)
T PRK06814 205 --------KIDRNII---RS---------TITLLKYAKADKRIWLAILGISWFWLV----GAVVLSQLPLLAKETLGGDE 260 (1140)
T ss_pred --------eeccchH---HH---------HHHHHHHHhcCchHHHHHHHHHHHHHH----HHHHHHHhHHHHHHHcCCch
Confidence 0000000 00 012344455544444433333332222 344556778877664 4432
Q ss_pred -ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhh--cc------ccCCcccchhhHHH
Q psy4866 336 -PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTI--EL------QYEIPYTSWVPFLS 406 (537)
Q Consensus 336 -~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~ 406 (537)
..+......+++.+++.++.|++.++..+++.+..+.++.+++.+.+.+...... .. ..-...+.+...+.
T Consensus 261 ~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (1140)
T PRK06814 261 NVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILID 340 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHH
Confidence 3456777888999999999999998887776665555555544443332100000 00 00000233444555
Q ss_pred HHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh-hccchhhhHhhHHHHHHH
Q psy4866 407 ISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH-IGMYSNFLFGGVSSLVCT 481 (537)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~ 481 (537)
.++++.+.+....+ ..+++.+..|++.+|+++|+.+++..++..+++.+.+.+.+. .++...+++.+++.++..
T Consensus 341 ~~~~g~~~~~~~~~-~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 341 LFGLAAAGGLYIVP-LFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred HHHHHHHHHHhHHH-HHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 55666665554444 458999999999999999999999999999999999998753 344444444444433333
No 88
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=7.8e-25 Score=207.07 Aligned_cols=353 Identities=14% Similarity=0.158 Sum_probs=234.9
Q ss_pred hccchhhHHhhhcCCCCCCCCCCh-hhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q psy4866 82 FAWSAPVLEELLSKESPIPMSPNE-GSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGL 160 (537)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l 160 (537)
....+.+.|.+.+ ++|+|..| .|.+.+++..+++++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+
T Consensus 42 R~n~s~a~p~L~~---elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 42 RPGESFITPYLLT---VLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred hchHHHHHHHHHH---HcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667788998 99999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh---hhHHHHHHHHHH---HHHHHHH
Q psy4866 161 YVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE---LSYMNYLTYSLI---IPIIFTV 234 (537)
Q Consensus 161 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~---~~wr~~~~~~~~---~~~~~~~ 234 (537)
.+.|++.|++.|..+ +...++..|+|+++|+++.+++.++..+|.++++++++. ++||+.+.+.-+ ...+.++
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999988876 488876555433 3344556
Q ss_pred HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcc---cccchHHhhccchHHHHHHHHHHHHH
Q psy4866 235 TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNV---ERTNFREFMGRSNMKAFVFMAFLAVF 311 (537)
Q Consensus 235 ~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (537)
..+++|..++-+.-+++.+.-............++. .+..+..+...... -...+++..+ .+.++-..++..
T Consensus 198 ~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~----n~~vl~WSlWwa 272 (511)
T TIGR00806 198 LALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPG-GKLEDYLGTCRDSFLVRMLSELVTIYR----NPQLLLWSLWWV 272 (511)
T ss_pred HHHhCCCCchhhhhccccccccccccccccCCCCCc-cccchhhhhhhhHHHHHHHHHHHHHhc----CcchhhhhHHHH
Confidence 667788555444333221100000000000000000 00000000000000 0112222222 223444455555
Q ss_pred HHhhhHHHHHHHHHHHHHhcCCCC--ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhH--HHHHHHHHHHHHHH
Q psy4866 312 RAFTGVQSIIAYANTIFASSETFL--PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSA--GCSLFSFIAGLYYY 387 (537)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 387 (537)
...++++-+..|...+.+....+. -.+..-.+..+.+.+..+..|++-.+..+...+.++.+ +.+..++++..
T Consensus 273 ~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~--- 349 (511)
T TIGR00806 273 FNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQ--- 349 (511)
T ss_pred HHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhc---
Confidence 566668888888888887664422 12244455566677788888888655543223333222 22222222222
Q ss_pred hhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHH
Q psy4866 388 VTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKL 456 (537)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 456 (537)
..+.|...+..+++...+.+.. ++...-++.....+.-|..+|+++++.-+-..+...+
T Consensus 350 ---------t~~Iw~~Y~~yvlf~~~y~fli-tia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~i 408 (511)
T TIGR00806 350 ---------SHDIWVLYVTYVLFRGIYQFLV-PIATFQIASSLSKELCALVFGINTFVATALKTIITAV 408 (511)
T ss_pred ---------ccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEE
Confidence 3567777888888888887654 4444666666677777999999988877666555543
No 89
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.94 E-value=1.8e-24 Score=214.75 Aligned_cols=367 Identities=13% Similarity=0.133 Sum_probs=256.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHH
Q psy4866 62 FLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTG 141 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 141 (537)
.+.|..-++..++..+ ....++-+.. +..-|+..++++..+..+...+.++++|.++||++||++++.+.
T Consensus 13 r~lw~a~~iS~lG~~~-------~~va~~wlv~---~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~ 82 (524)
T PF05977_consen 13 RRLWIAQLISNLGDWM-------QTVALAWLVT---QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ 82 (524)
T ss_pred HHHHHHHHHHHHHHHH-------HHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Confidence 3444444444444433 3334445555 56668889999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHH-----hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh-
Q psy4866 142 PITTASWIIAMYS-----RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE- 215 (537)
Q Consensus 142 ~l~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~- 215 (537)
++.++..++.++. .+.+.+++.-++.|++.+...|+..+++.|.+|+++...++++.+...++..++||.+++.
T Consensus 83 ~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~L 162 (524)
T PF05977_consen 83 LLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGIL 162 (524)
T ss_pred HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 8877665554432 3788999999999999999999999999999999999999999999999988888888876
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHH
Q psy4866 216 ---LSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFRE 292 (537)
Q Consensus 216 ---~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (537)
+|-.+.|.+.++..++.++....++..+. ++ + ..++. . .+.-+..++-
T Consensus 163 va~~G~~~~f~inalsfl~~i~~l~~~~~~~~----~~---------------~--~~~e~---~-----~~~l~~G~ry 213 (524)
T PF05977_consen 163 VAFFGAAAAFLINALSFLISILALLRWKPPPP----PS---------------S--LPRER---F-----FSALREGLRY 213 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccccc----cc---------------c--cchhh---h-----hhhHHHHHHH
Confidence 47778888887766554444444332110 00 0 00000 0 0000222333
Q ss_pred hhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHH
Q psy4866 293 FMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETF-LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLV 370 (537)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 370 (537)
+.+++..+..++...+..+. ...+...+|.+.++. +.+ ..-++.....+++.++|.++.+++.+|+++++++..
T Consensus 214 v~~~~~l~~~l~~~~~~~l~----~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~ 289 (524)
T PF05977_consen 214 VRSSPPLRSVLLRSFLFNLF----ASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLL 289 (524)
T ss_pred HhcchHHHHHHHHHHHHHHh----hhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHH
Confidence 33233323222222222221 223334567766543 332 223467778899999999999999999999998888
Q ss_pred hhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHH
Q psy4866 371 SSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLG 450 (537)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 450 (537)
+.++.+++++.+++. .+.+...+.+++.|.+...... ...+...+..|++.||++++++.++...+.
T Consensus 290 ~~~~~a~~~~~lal~------------~~~~~~~~~l~l~G~~~~~~~~-~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~ 356 (524)
T PF05977_consen 290 ASLLFALALLLLALS------------PSFWLALIALFLAGAAWIIANS-SLNTLVQLSVPDWVRGRVFSIYQMVFFGGM 356 (524)
T ss_pred HHHHHHHHHHHHhcc------------hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHhHHHHHHHHHHHHHH
Confidence 888888777766653 3445555666666666555443 345788899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHH
Q psy4866 451 LISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 451 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 484 (537)
.+|..+.|.+.+..|...++.+.++..+++.++.
T Consensus 357 ~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 357 PLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888777666655555544
No 90
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.2e-23 Score=188.93 Aligned_cols=362 Identities=15% Similarity=0.118 Sum_probs=267.5
Q ss_pred HHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHH
Q psy4866 65 SFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPIT 144 (537)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~ 144 (537)
|+.+..+.+..+...-..+...|+++++.+ |+|+|.+..|+++++..+...+.+++..+++.|+|.++.+..++++.
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~---~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli 87 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQ---DLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLI 87 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHH---HhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHH
Confidence 445555556667777788889999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh----hhh-hHH
Q psy4866 145 TASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG----SEL-SYM 219 (537)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~----~~~-~wr 219 (537)
++|.++-... +.+.++.+-.+.|.|.+...+..+.++.+.||++ -+..++++.+..++|..+++.+. ... +||
T Consensus 88 ~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~ 165 (395)
T COG2807 88 AAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWR 165 (395)
T ss_pred HHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHH
Confidence 9999998887 7888899999999999999999999999999764 79999999999888887775554 344 799
Q ss_pred HHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchH
Q psy4866 220 NYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNM 299 (537)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (537)
....+.+.++++.++.++.-...+ + ....+....+...++|++.-
T Consensus 166 ~aL~~WAl~allAl~~WlPq~~r~---------------------~--------------~~~~~~~~~~~~~vw~~~~a 210 (395)
T COG2807 166 GALGFWALLALLALLIWLPQALRE---------------------Q--------------AASIATKLVSVRKVWRSPLA 210 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccc---------------------c--------------ccccccccccccccccCchh
Confidence 999999999988877765321000 0 00001112222345555554
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhccc-CCcHHHHHhhHHHHH
Q psy4866 300 KAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRA-GRRVLFLVSSAGCSL 377 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 377 (537)
|... +++..+...++....|+|.++.+.|.+. +++....+..+.+++.++....+.+|. ++|+.......++.+
T Consensus 211 W~vt----LfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 211 WQVT----LFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred HHHH----HHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 4443 3444444458889999999999999984 566788888999999999999999865 456666666666666
Q ss_pred HHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhcccc-CCccccchhhHHHHHHHHHHHHHHHHH
Q psy4866 378 FSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEY-FSSNMKAVSCAVINILCTTLGLISYKL 456 (537)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~~~~~~ 456 (537)
+.+.+.+.. ...+ +...++++.+.+..+ ++....+... -.++..+.-.|+.+.++++-.+++|.+
T Consensus 287 G~~G~~~~P-----------~~~~--~lw~~llG~G~G~~F-~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l 352 (395)
T COG2807 287 GLVGLLLAP-----------GQLP--ILWALLLGLGQGGAF-PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWL 352 (395)
T ss_pred HHHHHHHhh-----------hhHH--HHHHHHHhCccchHH-HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhh
Confidence 666665431 1111 222355555544433 4444444444 345566788899999999999999999
Q ss_pred HHHHHHhhccch-hhhHhhHHHHHHHHHH
Q psy4866 457 FFLMDKHIGMYS-NFLFGGVSSLVCTVYL 484 (537)
Q Consensus 457 ~g~l~~~~g~~~-~~~~~~~~~~~~~~~~ 484 (537)
+|++.|..|.+. .+..+....++..+..
T Consensus 353 ~G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 353 FGFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred HhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 999999987554 3444444444444433
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=7.7e-24 Score=211.34 Aligned_cols=405 Identities=11% Similarity=0.028 Sum_probs=251.6
Q ss_pred HhhhhhhhhhccchhhHHhhhcCCCC--CCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh-hhhhHHHHHHHHHHHHHHH
Q psy4866 73 IAAFTTGMSFAWSAPVLEELLSKESP--IPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR-IGRKWSLLMTGPITTASWI 149 (537)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~l~~~~~~ 149 (537)
+..+...+......+.+|.+..+ + +|++..+.+++.+.+.++..++.+++|+++|| +|||++++++.++.+++.+
T Consensus 17 ~~~~~~~~~~~~~~~~L~~yl~~--~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~ 94 (475)
T TIGR00924 17 FVELWERFSYYGMQGILAVYLVQ--QAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHF 94 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 34555566666667777777552 4 89999999999999999999999999999999 8999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcc---cchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHH
Q psy4866 150 IAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSI---RGTIGTLFQISCHLGILYTYVLGSE----LSYMNYL 222 (537)
Q Consensus 150 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~ 222 (537)
+.+++++++.++++|++.|+|.|...+...++++|++|+++ |+.+.+++..+.++|.++|+.+++. .+|++.|
T Consensus 95 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f 174 (475)
T TIGR00924 95 MLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGF 174 (475)
T ss_pred HHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 99999999999999999999999999999999999998754 8889999999999999999988876 4899999
Q ss_pred HHHHHHHHHHHHHhhccc----CChHHHHHhCCHHHHHHHHH---------------hhcCCChhhHHHHHHH-----HH
Q psy4866 223 TYSLIIPIIFTVTFMFMP----ESPYFYAIKNQEGKAIESLK---------------WLRNKTADQVQSELQI-----IK 278 (537)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~----esp~~l~~~~~~~~a~~~~~---------------~~~~~~~~~~~~~~~~-----~~ 278 (537)
.+.++..++..+.+++.+ +.|+.- .+.+.++...... +...+.. ....-... ..
T Consensus 175 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 252 (475)
T TIGR00924 175 NLAAVGMVIGLLTFFAGRHMLRDIGSVP-DPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVV-IANILLMTVTLAVII 252 (475)
T ss_pred HHHHHHHHHHHHHHHHcccccccCCCCC-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 998865555444333322 222100 0000000000000 0000000 00000000 00
Q ss_pred HhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-C-----CCCChhHHHHHHHHHHHHHh
Q psy4866 279 QNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-E-----TFLPSDYISILFAIILLVSI 352 (537)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~ 352 (537)
....... +......-+++. ..++..++.....+..+......++.+.++. + ..........+..+..++..
T Consensus 253 ~~~~~~~-~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~ 329 (475)
T TIGR00924 253 FFFRLAF-KPRLDAVARNKM--YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGS 329 (475)
T ss_pred HHHHHHH-hccCCHHHHhHH--HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHH
Confidence 0000000 000000101111 1122222222222222333333344443332 1 11234456666666666666
Q ss_pred hhHhh----hhcc-cCCcHHH--HHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhh
Q psy4866 353 FPSTY----YIDR-AGRRVLF--LVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPL 425 (537)
Q Consensus 353 ~~~g~----l~d~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (537)
++..+ +.+| .+.+... .++.++.++++..+.+...... .....+.++.+....+.+.+... ..|...++
T Consensus 330 p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~---~~~~~s~~~~i~~~~~~~~ge~~-~~p~~~~~ 405 (475)
T TIGR00924 330 PVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFAD---AGGLTSPWFMVLIYLFQTLGELM-ISPLGLSW 405 (475)
T ss_pred HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCCccCHHHHHHHHHHHHHHHHH-HhHHHHHH
Confidence 65443 4443 2223333 6677777777666654311110 00123445555566666666544 55677799
Q ss_pred ccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhc
Q psy4866 426 LSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFL 488 (537)
Q Consensus 426 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 488 (537)
..+..|++.||+.+|+......+|..+++.+.....+..++...+...++++++..++.++..
T Consensus 406 ~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 406 WTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888776766777777777777776666654443
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.94 E-value=1.5e-24 Score=216.76 Aligned_cols=331 Identities=13% Similarity=0.082 Sum_probs=222.9
Q ss_pred hHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh----hhh-hHHHHHHHHHHHHHHHHHHHHhh------
Q psy4866 88 VLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR----IGR-KWSLLMTGPITTASWIIAMYSRS------ 156 (537)
Q Consensus 88 ~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Gr-r~~l~~~~~l~~~~~~~~~~~~~------ 156 (537)
..+.+.+ ++|+++.++|++.++..+..++..++.|+++|| +|| |+.++++.++.+++.+++.+.++
T Consensus 22 l~~~~~~---~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 22 LLFFYTD---VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHH---ccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchH
Confidence 3455566 899999999999999999999999999999998 687 55777888888888888877654
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhccC-CCcccchhhhHhHHHHHHHHHHHHHHhh-----------hhhHHHHHHH
Q psy4866 157 VLGLYVMRTLQGFSMAAIYVISPMYLGEIS-ETSIRGTIGTLFQISCHLGILYTYVLGS-----------ELSYMNYLTY 224 (537)
Q Consensus 157 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~~-----------~~~wr~~~~~ 224 (537)
...+++.+++.+++.+...+...++..|.. ++++|++..++...+..+|..+++.+.. ..+||+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i 178 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHH
Confidence 456677889999998888888888889987 4688999999988888887766544321 2479999998
Q ss_pred HHHHHHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHH
Q psy4866 225 SLIIPIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFV 303 (537)
Q Consensus 225 ~~~~~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (537)
.++++++..+. .+.++|.++. +. . + +.++.+.+..++++++++..+...
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~~~-----~~-------------~--~----------~~~~~~~~~~~~~l~~~~~~~~~~ 228 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERYSE-----IP-------------K--N----------IEKKLSLKQIFKALFKNDQLLILC 228 (437)
T ss_pred HHHHHHHHHHHHHcCCEecCCC-----CC-------------c--c----------cccCCCHHHHHHHHhCCHHHHHHH
Confidence 88887765544 4556765310 00 0 0 000000122344555544433333
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCCC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 304 FMAFLAVFRAFTGVQSIIAYANTIFASSETF-LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
+..++..+. ......+.+.+.+..... ........+..++.+++.++.+++.||+|+|+.+..+.++.+++.+.+
T Consensus 229 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~ 304 (437)
T TIGR00792 229 LAYLFYNLA----FNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIF 304 (437)
T ss_pred HHHHHHHHH----HHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 333222221 222223333333322111 123345556678889999999999999999999988887777666555
Q ss_pred HHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCC-------ccccchhhHHHHHHHHHHHHHHHH
Q psy4866 383 GLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFS-------SNMKAVSCAVINILCTTLGLISYK 455 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~ 455 (537)
.+. +.+.+...+...+.+.+.+.. .+..+++..|..+ ++.+|.+.|+.+....+|..+++.
T Consensus 305 ~~~-----------~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~ 372 (437)
T TIGR00792 305 FFA-----------GSNLPLILVLIILAGFGQNFV-TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGF 372 (437)
T ss_pred HHc-----------chhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHH
Confidence 432 112233333444444444433 3445677777754 556799999999999999999999
Q ss_pred HHHHHHHhhccc
Q psy4866 456 LFFLMDKHIGMY 467 (537)
Q Consensus 456 ~~g~l~~~~g~~ 467 (537)
+.|.+.+..|+.
T Consensus 373 i~g~ll~~~G~~ 384 (437)
T TIGR00792 373 LVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHcCCC
Confidence 999999987764
No 93
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=2e-24 Score=209.52 Aligned_cols=329 Identities=15% Similarity=0.084 Sum_probs=218.0
Q ss_pred hhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhh-----hhhHH-HHHHHHHHHHHHHHHHHH
Q psy4866 81 SFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRI-----GRKWS-LLMTGPITTASWIIAMYS 154 (537)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~l~~~~~~~~~~~ 154 (537)
..+..++.+|.+.+ |+|+|.+++|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.++..++.++.
T Consensus 3 ~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~ 77 (356)
T TIGR00901 3 PLGLVGNTLPYWLR---SKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL 77 (356)
T ss_pred CchhHHhHHHHHHH---HcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC
Confidence 34567788999999 999999999999766 455555 89999999998 89886 567777777777777776
Q ss_pred ---hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hh--------HH
Q psy4866 155 ---RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LS--------YM 219 (537)
Q Consensus 155 ---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~--------wr 219 (537)
.+.+.+....++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.. .+ ||
T Consensus 78 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr 157 (356)
T TIGR00901 78 VPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWG 157 (356)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccH
Confidence 4666777888889999998999999999999999999999999999999999999888754 46 99
Q ss_pred HHHHHHHHHHHHHHHHhhc-ccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccch
Q psy4866 220 NYLTYSLIIPIIFTVTFMF-MPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSN 298 (537)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~-~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (537)
..|++.++..++..+..++ .||+++. + + +.+++. ++ .+..++++++++.
T Consensus 158 ~~f~i~ai~~l~~~~~~~~~~~e~~~~-----~--------------~--~~~~~~---~~------~~~~~~~~~~~~~ 207 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTLFLAKEPQED-----A--------------S--VPKPLT---QA------VLKPIREFFQRKN 207 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcc-----c--------------c--cchhHH---HH------HHHHHHHHHHhcC
Confidence 9999999887775555443 5664210 0 0 000000 00 0123344444333
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCC-hhHHHHHHH-HHHHHHhhhHhhhhcccCCcHHHHHhhHHHH
Q psy4866 299 MKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLP-SDYISILFA-IILLVSIFPSTYYIDRAGRRVLFLVSSAGCS 376 (537)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 376 (537)
.+..........+ ..........+.|.++++.|.+.. .+......+ +..+++.++++++.||+|+|+.+..+.++.+
T Consensus 208 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~ 286 (356)
T TIGR00901 208 MIQALLLLLLIVL-YKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQA 286 (356)
T ss_pred chHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 1222222222222 222344566677887777665422 223333333 5678899999999999999999888887776
Q ss_pred HHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHH
Q psy4866 377 LFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCT 447 (537)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 447 (537)
+...++.+........+. .....+......++.+.+.+... +...++..|.+|+++||+.+|+.+...+
T Consensus 287 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 287 LTNAGFVWLASNGHHDGI-TFPHLLMLFLTITLEAVTGGLGT-VAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHhcCccccc-ccchHHHHHHHHHHHHHHhHHHH-HHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 665544432110000000 00112333333444455544444 4456999999999999999999887654
No 94
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.93 E-value=3.3e-24 Score=213.87 Aligned_cols=400 Identities=11% Similarity=0.017 Sum_probs=239.7
Q ss_pred hhhhhhhhccchhhH-HhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh-hhhhHHHHHHHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVL-EELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR-IGRKWSLLMTGPITTASWIIAM 152 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~l~~~~~~~~~ 152 (537)
.+...+.+....+.+ ..+.+ ++|++..+.+++.+.+.....+..+++|+++|| +||||+++++.+++++++++++
T Consensus 23 ~~~er~~~y~~~~~l~~yl~~---~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~ 99 (489)
T PRK10207 23 ELWERFGYYGVQGILAVFFVK---QLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG 99 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 334444544444444 44455 899999999999999999999999999999999 9999999999999999999999
Q ss_pred HHhhHHH-HHHHHHHHHhHhhhhhhhhhhhhhccCCCc--ccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHH
Q psy4866 153 YSRSVLG-LYVMRTLQGFSMAAIYVISPMYLGEISETS--IRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYS 225 (537)
Q Consensus 153 ~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~ 225 (537)
++.+... ++++|+++|+|.|...+...+++.|++|++ +|+++++++..+.++|.+++|.++++ +|||+.|++.
T Consensus 100 ~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~ 179 (489)
T PRK10207 100 MSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLC 179 (489)
T ss_pred HhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHH
Confidence 9877554 458999999999999999999999999877 45778999999999999888877765 5999999987
Q ss_pred HHHHHHHHHHhhcccCChHHHH--HhCCHHHHHHH-------------HHhhcCCChhhHHHHHHHH----HH--hhhhc
Q psy4866 226 LIIPIIFTVTFMFMPESPYFYA--IKNQEGKAIES-------------LKWLRNKTADQVQSELQII----KQ--NTSKN 284 (537)
Q Consensus 226 ~~~~~~~~~~~~~~~esp~~l~--~~~~~~~a~~~-------------~~~~~~~~~~~~~~~~~~~----~~--~~~~~ 284 (537)
++..++.++.+++.++..+... .+++..+.... ..+..+.. +........ .. -..++
T Consensus 180 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~f~~~~ 257 (489)
T PRK10207 180 GAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNV--EVANLVLIVLSIVVTIIFFREA 257 (489)
T ss_pred HHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHH
Confidence 6544333333333332110000 00000010000 00000000 000000000 00 00000
Q ss_pred ccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-c-----CCCCChhHHHHHHHHHHHHHhhhHhhh
Q psy4866 285 VERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-S-----ETFLPSDYISILFAIILLVSIFPSTYY 358 (537)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~g~l 358 (537)
. +. .+.+|++...... .++.....+..+......++.+.++ . |....+.....+..+..++..++.+++
T Consensus 258 ~-~~--~~~~r~r~~~~~~--l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l 332 (489)
T PRK10207 258 F-KL--DKTGRNKMFVAFV--LMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGI 332 (489)
T ss_pred h-cC--CHHHHHHHHHHHH--HHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHH
Confidence 0 00 0222222211111 1111111222222333344444442 1 111233344445556677788888999
Q ss_pred hcccCCcH-------HHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCC
Q psy4866 359 IDRAGRRV-------LFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFS 431 (537)
Q Consensus 359 ~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 431 (537)
.||+++|+ .+.++.++.+++++.+........ ..+...+.++.+...++.+.+..+. .+....++.+..|
T Consensus 333 ~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~--~~~~~~s~~~~i~~~~l~g~Ge~~~-~~~g~~~~~~~aP 409 (489)
T PRK10207 333 YTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFA--DAQGLTSPWFIVLVYLFQSLGELFI-SALGLAMIAALVP 409 (489)
T ss_pred HHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCccCHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhCh
Confidence 99999886 366777777766654432111000 0011123444555666666666554 4555688888999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHH----------hhccchhhhHhhHHHHHHHHHHHhh
Q psy4866 432 SNMKAVSCAVINILCTTLGLISYKLFFLMDK----------HIGMYSNFLFGGVSSLVCTVYLYYF 487 (537)
Q Consensus 432 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~~ 487 (537)
++.+|.++|+.+...++|+.++..+...... ...+.+.|...++.++++.++.+..
T Consensus 410 ~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~ 475 (489)
T PRK10207 410 QHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALM 475 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887764421 1113455666666666665555443
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.93 E-value=7.8e-25 Score=224.28 Aligned_cols=297 Identities=11% Similarity=0.119 Sum_probs=205.2
Q ss_pred HHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHH
Q psy4866 69 VTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASW 148 (537)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~ 148 (537)
+..++..+...+..++..++++.+.+ +|+++..+.|++.+.+.++++++.++.|++.||+|||+++.++++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek---~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIER---RFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhh---hhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 33445666666777889999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh---------------------------------------------------hHHHHHHHHHHHHhHhhhhhhh
Q psy4866 149 IIAMYSR---------------------------------------------------SVLGLYVMRTLQGFSMAAIYVI 177 (537)
Q Consensus 149 ~~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~ 177 (537)
+++++.+ .+..++++|+++|+|.+..++.
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~ 192 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPL 192 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhc
Confidence 9998763 2456789999999999999999
Q ss_pred hhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh--------------------------hHHHHHHHHHHHHHH
Q psy4866 178 SPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL--------------------------SYMNYLTYSLIIPII 231 (537)
Q Consensus 178 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~--------------------------~wr~~~~~~~~~~~~ 231 (537)
..+++.|++|+++|+++++++..+..+|.++|+++++.+ +||..|++.+++.++
T Consensus 193 ~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l 272 (633)
T TIGR00805 193 GISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALL 272 (633)
T ss_pred CchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887542 277788888888777
Q ss_pred HHHHhhcccCC-hHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHH
Q psy4866 232 FTVTFMFMPES-PYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAV 310 (537)
Q Consensus 232 ~~~~~~~~~es-p~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (537)
..+.++++|++ |+.. .+.+.++.++ ....+.. ++...+ ......+....++.+++++..+. ..+..
T Consensus 273 ~~v~l~~~p~~lp~~~-~~~~~~~~~~--~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~Ll~n~~f~~----~~l~~ 339 (633)
T TIGR00805 273 TSIPFFFFPKALPKEG-KRVNVDVHET--EKLEKSE-DKSRKK-----NSDITKDFPKIIKRLLCNPIYML----VILAQ 339 (633)
T ss_pred HHHHHHhCccccCCcc-cccchhhhhh--hcccccc-cccchh-----hhhhHHHHHHHHHHHHcCcHHHH----HHHHH
Confidence 66656666654 2110 0000000000 0000000 000000 00000000223455666554333 33333
Q ss_pred HHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHH-HHHHHhhhHhhhhcccCC--cHHHHHhhHHHHHHHHH
Q psy4866 311 FRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAI-ILLVSIFPSTYYIDRAGR--RVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~~~~~ 381 (537)
+......+.+..|+|.+++.. +.+. .++....+..+ +.+++.+++|+++||++. |+.+..+.++..+..+.
T Consensus 340 ~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 340 VIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 334444677888999999764 4432 23334434443 567899999999999984 45666666555555443
No 96
>KOG2615|consensus
Probab=99.93 E-value=5.9e-24 Score=191.24 Aligned_cols=351 Identities=15% Similarity=0.085 Sum_probs=206.6
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVI 177 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 177 (537)
+.+.+..-.|.+.+.|++.+.+.++.+|.++||+|||++++++++..++..++.+++.||..+++.|++.|+..|-. .+
T Consensus 62 ~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v 140 (451)
T KOG2615|consen 62 PDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SV 140 (451)
T ss_pred cccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HH
Confidence 33445567899999999999999999999999999999999999999999999999999977777799999997755 67
Q ss_pred hhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhhhH------HHHHHH----HHHHHHH-HHHHhhcccCChHHH
Q psy4866 178 SPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSELSY------MNYLTY----SLIIPII-FTVTFMFMPESPYFY 246 (537)
Q Consensus 178 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~~w------r~~~~~----~~~~~~~-~~~~~~~~~esp~~l 246 (537)
..++++|.+++++|+++++..+..+++|.++||.+|+++.- +++|.. ..++... .....+++|||-.
T Consensus 141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~-- 218 (451)
T KOG2615|consen 141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP-- 218 (451)
T ss_pred HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc--
Confidence 89999999999999999999999999999999999988633 112222 2222222 3345677899831
Q ss_pred HHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhcc-chHH--HHHHHHHHHHHHHhhhHHHHHHH
Q psy4866 247 AIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGR-SNMK--AFVFMAFLAVFRAFTGVQSIIAY 323 (537)
Q Consensus 247 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 323 (537)
.+++.++.. +..+......+..+.+ +......+++ +... ...-.+.+..+.....+....++
T Consensus 219 -~rk~~~~~~------------~~~~~~~~~~~~~~~~--~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t 283 (451)
T KOG2615|consen 219 -LRKRNDEHS------------TLQEAADDRLALLKFA--RIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENT 283 (451)
T ss_pred -chhhccccc------------chhhhhhhhhhhcchh--hhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111111110 0000000000000000 0000001111 0000 00111111111111112222222
Q ss_pred HHHHH--HhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccC--CcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcc
Q psy4866 324 ANTIF--ASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAG--RRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPY 398 (537)
Q Consensus 324 ~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (537)
...+ +..+++. +.+......++.+.+.........+|.+ .+-.+.....++.-..+++.. ..
T Consensus 284 -~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~------------~~ 350 (451)
T KOG2615|consen 284 -VLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSL------------AR 350 (451)
T ss_pred -HHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhc------------cc
Confidence 2333 2234432 3334444445555555544444555544 233333333333333332222 12
Q ss_pred cchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccchhhhHhhHHH
Q psy4866 399 TSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI-GMYSNFLFGGVSS 477 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~ 477 (537)
..........+..+...... +-...+.....|.+.||+..|+....+.++-++||.+.|.+..+. +-+.++...+.+.
T Consensus 351 ~~~~l~~~s~l~sf~~A~~v-t~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~ 429 (451)
T KOG2615|consen 351 TPVVLYLGSTLKSFSTASVV-TCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALL 429 (451)
T ss_pred cchhhhHHHHHHHHHHHHhh-HHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHH
Confidence 23334444444444444444 334478888899999999999999999999999999998877653 3333444444444
Q ss_pred HHH
Q psy4866 478 LVC 480 (537)
Q Consensus 478 ~~~ 480 (537)
+++
T Consensus 430 ~~~ 432 (451)
T KOG2615|consen 430 LIP 432 (451)
T ss_pred HHH
Confidence 444
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.93 E-value=8.8e-23 Score=200.35 Aligned_cols=367 Identities=10% Similarity=0.069 Sum_probs=234.5
Q ss_pred HHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHH--HHHHHHHHhhhhhhh-HHhhhhhhhhHHHHHHHHHH-
Q psy4866 69 VTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWV--VAIIEIGNYLSPIPA-GMLVNRIGRKWSLLMTGPIT- 144 (537)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~s~~~~~~~~~~~~~-G~l~dr~Grr~~l~~~~~l~- 144 (537)
+.+....+..|...+...|.+|.+.+ +.|.|.+++|++ .+.+.+...+.++++ ++..||+||||..++.+.+.
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~---~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLR---EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 34555678899999999999999999 999999999997 466778887888888 45799999988875554332
Q ss_pred HHHHHHHH---HHhh-HHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh----hhh
Q psy4866 145 TASWIIAM---YSRS-VLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG----SEL 216 (537)
Q Consensus 145 ~~~~~~~~---~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~----~~~ 216 (537)
.+.....+ ...+ ..+++..-++.++..+...+...++..|..++++++.+.+....+..+|.++++.+. ..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 21222222 1222 334455566666777778888888888999888889888888888889999888544 446
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhcc
Q psy4866 217 SYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGR 296 (537)
Q Consensus 217 ~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (537)
+||..|++.+++.++..+..++++|+++ .+. ++ . ++...++++.+|+
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~~~~-----~~~------------~~--~--------------~~~~~~~~~~l~~ 207 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKDRAV-----ASP------------EA--P--------------LARRASLFRFFRR 207 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCc-----Ccc------------cc--c--------------hhhHHHHHHHHcC
Confidence 9999999999888765555555443320 000 00 0 0001234556665
Q ss_pred chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCC-hhHHHHHHH-HHHHHHhhhHhhhhcccCCcHHHHHhhHH
Q psy4866 297 SNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLP-SDYISILFA-IILLVSIFPSTYYIDRAGRRVLFLVSSAG 374 (537)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 374 (537)
+..+......++.... ......+.+.++.+.|.+.+ .+......+ ...+++.++.|++.||+++|+.+..+..+
T Consensus 208 ~~~~~~~~~~~l~~~~----~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 283 (390)
T TIGR02718 208 PLAWSLLALALLSAMT----AVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGL 283 (390)
T ss_pred cCHHHHHHHHHHHHHH----HHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 5444433333333222 33444566777777776532 334334443 45667788999999999999998877665
Q ss_pred HHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCc-cccchhhHHHHHHHHHHHHHH
Q psy4866 375 CSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSS-NMKAVSCAVINILCTTLGLIS 453 (537)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~~~~~g~~~~ 453 (537)
.++..+.......... ............+.+...+..... ..+...+..++ +.+++.+++.+...++|..++
T Consensus 284 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g 356 (390)
T TIGR02718 284 AGSLALLWFAQAAFWL------APGIAVAWSCSAFGSLITGITSVA-IYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIA 356 (390)
T ss_pred HHHHHHHHHHHHHccc------CCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcccchHHHHHHHHHHHHHHHHHH
Confidence 5333222221110000 011111111112222223333222 33454555554 788999999999999999999
Q ss_pred HHHHHHHHHhhccchhhhHhhHHHHHHHH
Q psy4866 454 YKLFFLMDKHIGMYSNFLFGGVSSLVCTV 482 (537)
Q Consensus 454 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 482 (537)
|.+.|.+.|..|+...|.+.+++.+++.+
T Consensus 357 ~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 357 SSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999988888777666666544
No 98
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.92 E-value=3e-22 Score=195.36 Aligned_cols=388 Identities=15% Similarity=0.172 Sum_probs=254.2
Q ss_pred hhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhh----hhhhhHHHHHH-HHHHHHHHHHHHH
Q psy4866 79 GMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVN----RIGRKWSLLMT-GPITTASWIIAMY 153 (537)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~l~~~-~~l~~~~~~~~~~ 153 (537)
.+..+...+.++.+.+ ++|.+..+.+++..+..+...+.+++.|+++| |+||||.++++ .+..+++.++.++
T Consensus 17 q~~~~l~~~~l~~yl~---~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~ 93 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQ---ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGF 93 (477)
T ss_pred HHHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHh
Confidence 4445555666667777 89999999999999999999999999999999 59999988774 6666677777777
Q ss_pred HhhHH-----------------HHHHHHHHHHhHhhhhhhhhhhhhhccCCCccc--chhhhHhHHHHHHHHHHHHHHhh
Q psy4866 154 SRSVL-----------------GLYVMRTLQGFSMAAIYVISPMYLGEISETSIR--GTIGTLFQISCHLGILYTYVLGS 214 (537)
Q Consensus 154 ~~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~i~~~l~~ 214 (537)
++++. .++++-.+..++.....+...+++.|.+|+++| +.+.++.+...++|.++++.+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~ 173 (477)
T TIGR01301 94 AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGA 173 (477)
T ss_pred CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76643 223333444557788888899999999998765 68999999999999999998886
Q ss_pred hh-------------------hHHHHHHHHHHHHHHHH-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHH
Q psy4866 215 EL-------------------SYMNYLTYSLIIPIIFT-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSEL 274 (537)
Q Consensus 215 ~~-------------------~wr~~~~~~~~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 274 (537)
.. +.|..|++.++..++.. +..+.++|.|... .++.++ ++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~-----------------~~~ 234 (477)
T TIGR01301 174 YSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFIN-----------------SEA 234 (477)
T ss_pred HHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchh-----------------hhc
Confidence 53 44678888887776655 4455678876210 000000 000
Q ss_pred HHHHHhhhhcccccchHHhhc-cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCC--C-------Ch----hHH
Q psy4866 275 QIIKQNTSKNVERTNFREFMG-RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETF--L-------PS----DYI 340 (537)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~----~~~ 340 (537)
+ + .++...+..++++++ -+...+.+...++..++.+.+...+..|.+.++.+.-+. . +. .+.
T Consensus 235 ~---~-~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~ 310 (477)
T TIGR01301 235 A---P-PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFG 310 (477)
T ss_pred c---c-ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHH
Confidence 0 0 000000122334433 111122233333334444445666667777766542111 1 11 134
Q ss_pred HHHHHHHHHHHhhhHhhhhcccCC-cHHHHHhhHHHHHHHHHHHHHHHhhhcc-ccC------Cccc--chhhHHHHHHH
Q psy4866 341 SILFAIILLVSIFPSTYYIDRAGR-RVLFLVSSAGCSLFSFIAGLYYYVTIEL-QYE------IPYT--SWVPFLSISLL 410 (537)
Q Consensus 341 ~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~--~~~~~~~~~~~ 410 (537)
....++...+.+++..++.+|+|+ |+....+.++.++++....+.....+.. ..+ .+.. .+..++...++
T Consensus 311 l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 390 (477)
T TIGR01301 311 LMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAIL 390 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHh
Confidence 455666666777788889999985 6776888777777777665443211000 000 0000 24555666667
Q ss_pred HHHHhhccccchhhhccccCCc--cccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc--chhhhHhhHHHHHHHHHHHh
Q psy4866 411 GVFFNLGFGPLFTPLLSEYFSS--NMKAVSCAVINILCTTLGLISYKLFFLMDKHIGM--YSNFLFGGVSSLVCTVYLYY 486 (537)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~--~~~~~~~~~~~~~~~~~~~~ 486 (537)
|..+... ..++++++++..++ +..|..+|+.|.+..+.+.+.....|.+.+..|. ..++.+.++..+++.++.++
T Consensus 391 Gi~~A~~-~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~ 469 (477)
T TIGR01301 391 GIPLAIT-YSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALI 469 (477)
T ss_pred hHHHHHH-HHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHH
Confidence 7776654 46788999999885 4559999999999999999999988987776663 35667778888888888888
Q ss_pred hccCCCC
Q psy4866 487 FLLETKG 493 (537)
Q Consensus 487 ~~~~~~~ 493 (537)
.+|+.+.
T Consensus 470 ~~~~~~~ 476 (477)
T TIGR01301 470 LLPRPRV 476 (477)
T ss_pred hCCCCCC
Confidence 8887653
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.91 E-value=3.8e-22 Score=200.33 Aligned_cols=394 Identities=11% Similarity=0.038 Sum_probs=226.1
Q ss_pred hhhhhhhccchhhHHhh-hcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh-hhhhHHHHHHHHHHHHHHHHHHH
Q psy4866 76 FTTGMSFAWSAPVLEEL-LSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR-IGRKWSLLMTGPITTASWIIAMY 153 (537)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~l~~~~~~~~~~ 153 (537)
+...+......+.++.+ .+ ++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.+++++
T Consensus 31 ~~~~~~~y~~~~~l~~yl~~---~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~ 107 (500)
T PRK09584 31 LWERFGYYGLQGIMAVYLVK---QLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW 107 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444 46 899999999999988887777777899999999 59999999999999999999988
Q ss_pred Hh-hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcc--cchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHH
Q psy4866 154 SR-SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSI--RGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSL 226 (537)
Q Consensus 154 ~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~ 226 (537)
++ +.+.++++|+++|+|.|...+...+++.|++|+++ |..++++++.+.++|..++|.++++ +|||+.|++.+
T Consensus 108 ~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~ 187 (500)
T PRK09584 108 SGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSV 187 (500)
T ss_pred hcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 75 56677788999999999988999999999998654 4567888889999999999888866 48999999987
Q ss_pred HHHHHHHHHhh----cccCChHHHHHhCCHHHHHHH------------HHhhcCCChhhHHHHHHHHHHhhhhcccccch
Q psy4866 227 IIPIIFTVTFM----FMPESPYFYAIKNQEGKAIES------------LKWLRNKTADQVQSELQIIKQNTSKNVERTNF 290 (537)
Q Consensus 227 ~~~~~~~~~~~----~~~esp~~l~~~~~~~~a~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (537)
+..++.++.++ .++|.++- ..+.+.+..... ........ +.............. ....
T Consensus 188 i~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~ 261 (500)
T PRK09584 188 VGMLITVVNFAFCQRWVKQYGSK-PDFEPINYRKLLLTIVGVVALIAIATWLLHNQ-EIARMALGVVALGIV----VIFG 261 (500)
T ss_pred HHHHHHHHHHHHhHHHhccCCCC-CCccccchhhHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHH----HHHH
Confidence 65544333222 23332100 000000100000 00000000 000000000000000 0000
Q ss_pred HHh--hccchHHHHHHHH--HHHHHHHhhhHHHHHHHHHHHHHh-----c-----CCCCChhHHHHHHHHHHHHHhhhH-
Q psy4866 291 REF--MGRSNMKAFVFMA--FLAVFRAFTGVQSIIAYANTIFAS-----S-----ETFLPSDYISILFAIILLVSIFPS- 355 (537)
Q Consensus 291 ~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~- 355 (537)
++. .++..+++.+... ++.... ++......+..+.. . |..........+..+..++..++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~i~----f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~ 337 (500)
T PRK09584 262 KEAFAMKGAARRKMIVAFILMLEAII----FFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILA 337 (500)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHH----HHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHH
Confidence 000 0011111111111 111111 22222222333221 1 111234455555565555555555
Q ss_pred ---hhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCc
Q psy4866 356 ---TYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSS 432 (537)
Q Consensus 356 ---g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 432 (537)
+++.+|.+..+.+.+++++.+++++.+........ .....+.++.+...++.+.+.. ...|....++.+..|+
T Consensus 338 ~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~---~~~~vs~~~~~~~~~l~~~ge~-~~~p~g~s~~~~~aP~ 413 (500)
T PRK09584 338 AIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFAN---DAGIVSVNWLIASYGLQSIGEL-MISGLGLAMVAQLVPQ 413 (500)
T ss_pred HHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhCcH
Confidence 55555655667788888888888877665432111 0001123344445555555544 4567777999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHH----------hhccchhhhHhhHHHHHHHHHHHh
Q psy4866 433 NMKAVSCAVINILCTTLGLISYKLFFLMDK----------HIGMYSNFLFGGVSSLVCTVYLYY 486 (537)
Q Consensus 433 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 486 (537)
+.||+.+|+......+|..++..+.+.... ..++...|...++.+++..++.+.
T Consensus 414 ~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 414 RLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998877777777776666542211 113556676677666655544433
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.90 E-value=4.9e-21 Score=184.91 Aligned_cols=366 Identities=16% Similarity=0.164 Sum_probs=246.5
Q ss_pred hhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhh-hhHHHHHHHHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIG-RKWSLLMTGPITTASWIIAMY 153 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~l~~~~~l~~~~~~~~~~ 153 (537)
.|+..+..+...|.++.+.+ +.|.|..|+|.+.+...+...++++++|.++||++ +|+++.+..++.++...+...
T Consensus 11 ~f~~f~~~G~~~p~~~~~L~---~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 11 YFLYFFAYGAFLPYLPLYLE---SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 34444566677888899999 89999999999999999999999999999999987 688888888888777777778
Q ss_pred HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHH-----HhhhhhH---HHHHHHH
Q psy4866 154 SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYV-----LGSELSY---MNYLTYS 225 (537)
Q Consensus 154 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~-----l~~~~~w---r~~~~~~ 225 (537)
.++++.+++.-++..+......|...++..+...+ ++.-.+-.-...++|.+++.. +.+..++ ...+++.
T Consensus 88 ~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~ 165 (400)
T PF03825_consen 88 SSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIA 165 (400)
T ss_pred hccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHH
Confidence 88999998888888888888888888888887753 233334444444444444422 2222222 2455666
Q ss_pred HHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHH
Q psy4866 226 LIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFM 305 (537)
Q Consensus 226 ~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (537)
+...++.....+.+|+.|.- + +. ++..++....+..+++|++.....++.
T Consensus 166 ~~~~~ll~~~~l~lp~~~~~---~-~~--------------------------~~~~~~~~~~~~~~llk~~~~~~Fll~ 215 (400)
T PF03825_consen 166 AILSLLLAGFALFLPKTPPK---R-SA--------------------------KESVKKLLGLDALKLLKNPRFLVFLLA 215 (400)
T ss_pred HHHHHHHHHHHHhCCCCccc---c-cc--------------------------CCCcccccchHHHHHhcCccHHHHHHH
Confidence 65555555555667876510 0 00 000000011223456665554433333
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcC-CCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHH
Q psy4866 306 AFLAVFRAFTGVQSIIAYANTIFASSE-TFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAG 383 (537)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 383 (537)
.++... .......|.+.++++.| ... ..+....+..+..++.-...+++..|+|.++++.++.+..++-..+++
T Consensus 216 ~~l~~~----~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 216 AFLIGI----SHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHH----HHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 333322 24556777788888887 332 334555666778889999999999999999999999999888887776
Q ss_pred HHHHhhhccccCCcccchhhHHH----HHHHHHHHhhccccchhhhccccCCccccchhhHHHHHH-HHHHHHHHHHHHH
Q psy4866 384 LYYYVTIELQYEIPYTSWVPFLS----ISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINIL-CTTLGLISYKLFF 458 (537)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g 458 (537)
.. +++.+..... ..+.+..++..+.. ...++.+..|++.|+++.++.+.. ..+|..++..+.|
T Consensus 292 ~~-----------~~~~~~~~~~~~l~q~lhG~tf~~~~~a-~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG 359 (400)
T PF03825_consen 292 YF-----------SDPWPFIVALQLLGQLLHGLTFGLFHAA-SVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGG 359 (400)
T ss_pred Hh-----------cCCcHHHHHHHHHHHhhhhHHHHHHHHH-HHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 63 1222222222 23466666665544 448999999999999999998875 5799999999999
Q ss_pred HHHHhhccchh------hhHhhHHHHHHHHHHHhhccCC
Q psy4866 459 LMDKHIGMYSN------FLFGGVSSLVCTVYLYYFLLET 491 (537)
Q Consensus 459 ~l~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~ 491 (537)
++.|+.|.+.. +.+.+++.++..++.+++.|++
T Consensus 360 ~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 360 WLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999876543 3344444444444444444443
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.89 E-value=4.8e-21 Score=192.15 Aligned_cols=351 Identities=13% Similarity=0.054 Sum_probs=212.9
Q ss_pred hhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhh----hhhh-hHHHHHHHHHHHHHH
Q psy4866 74 AAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVN----RIGR-KWSLLMTGPITTASW 148 (537)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~d----r~Gr-r~~l~~~~~l~~~~~ 148 (537)
+.+..++......+.++.+..+ .+|++..++|.+..+..+.-++..++.|+++| |+|| |+.++++.+..+++.
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~--v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTD--VVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 3333444444455544444432 67999999999999999999999999999999 5697 777778888888776
Q ss_pred HHHHHHh------hHHHHHHHHHHHHhHhhhhhhhhhhhhhccC-CCcccchhhhHhHHHHHHHHHHHHHHhh----h--
Q psy4866 149 IIAMYSR------SVLGLYVMRTLQGFSMAAIYVISPMYLGEIS-ETSIRGTIGTLFQISCHLGILYTYVLGS----E-- 215 (537)
Q Consensus 149 ~~~~~~~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~~----~-- 215 (537)
+++-..+ .+..+++..++.+++.....+...+++.|.. ++++|.+..++-..+.++|..+.+.+.. .
T Consensus 92 ~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 92 FLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6554433 1345666677788888888888999999998 5888999988866666666554433321 1
Q ss_pred -----hhHHHHHHHHHHHHHHHHH-HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccc
Q psy4866 216 -----LSYMNYLTYSLIIPIIFTV-TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTN 289 (537)
Q Consensus 216 -----~~wr~~~~~~~~~~~~~~~-~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (537)
.+|+....+.+++.++..+ ..+..+|.+.. . .. + .+..++.+.+..
T Consensus 172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~-------------------~---~~--~----~~~~~~~~~~~~ 223 (473)
T PRK10429 172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSS-------------------D---NQ--V----SAEGSHLTLKDI 223 (473)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCc-------------------c---cc--c----cccccCCCHHHH
Confidence 2466666666666555333 33345654200 0 00 0 000000000222
Q ss_pred hHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCC-hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHH
Q psy4866 290 FREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLP-SDYISILFAIILLVSIFPSTYYIDRAGRRVLF 368 (537)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 368 (537)
++.+++++.++..+...++.. ........+.+.+.+....... .........++.+++.++.+++.||+|+|+.+
T Consensus 224 ~~~~~~n~~~~~ll~~~~~~~----~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~ 299 (473)
T PRK10429 224 VALIYKNDQLSCLLGMALAYN----IASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW 299 (473)
T ss_pred HHHHhcCHHHHHHHHHHHHHH----HHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 233333333222222222222 2233333444444333322211 22344445678888999999999999999998
Q ss_pred HHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCC-------ccccchhhHH
Q psy4866 369 LVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFS-------SNMKAVSCAV 441 (537)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~ 441 (537)
..+..+..++.+.+....... +...+..++...+.+.+.+... +..+++.+|..+ .+..|..+|.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~~l~g~~~~~~~-~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 300 AGASIFPVLSCGVLLLMGLAA-------PHNALLIVIAGILLNIGTALFW-VLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHHHHHHHHHHHHhccC-------chhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 887776555554443221111 1223333444444445544433 445678888855 3345668899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 442 INILCTTLGLISYKLFFLMDKHIGM 466 (537)
Q Consensus 442 ~~~~~~~g~~~~~~~~g~l~~~~g~ 466 (537)
..++..++..+++.+.|.+.+..|+
T Consensus 372 ~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 372 QTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999988776
No 102
>KOG2563|consensus
Probab=99.88 E-value=6.1e-20 Score=169.96 Aligned_cols=390 Identities=14% Similarity=0.135 Sum_probs=261.9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHH
Q psy4866 57 LHTVLFLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWS 136 (537)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~ 136 (537)
..+...++|+++++.++..+.+++..-.++++...... .++ +....-|+.-+|++.+....+++-|+.|++|-|..
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~---~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a 111 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNS---FYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTA 111 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHH---Hhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHH
Confidence 34566789999999999999999888888888888877 778 77788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh------hHH--HHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHH
Q psy4866 137 LLMTGPITTASWIIAMYSR------SVL--GLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILY 208 (537)
Q Consensus 137 l~~~~~l~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i 208 (537)
.+++..+.++|..+-..+. .++ ....+..+.+.++-........+..-||++++|..+..+-.++..+|.++
T Consensus 112 ~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvav 191 (480)
T KOG2563|consen 112 LLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAV 191 (480)
T ss_pred HHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHH
Confidence 9999999999998877653 344 66688888888887777777788888999999999999988888888888
Q ss_pred HHHHhhh----------hhHHH--HHHHHHHHHHHHHH-HhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHH
Q psy4866 209 TYVLGSE----------LSYMN--YLTYSLIIPIIFTV-TFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQ 275 (537)
Q Consensus 209 ~~~l~~~----------~~wr~--~~~~~~~~~~~~~~-~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 275 (537)
+.++... ..|.. .|+....++.+.++ ..+..++.|+. ++...
T Consensus 192 g~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t-------------------------Pps~s 246 (480)
T KOG2563|consen 192 GFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT-------------------------PPSAS 246 (480)
T ss_pred HhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-------------------------CCchh
Confidence 7766543 24544 35544444433332 22333333310 00000
Q ss_pred HHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCC-CChhHHHHHHHHHHHHHhhh
Q psy4866 276 IIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETF-LPSDYISILFAIILLVSIFP 354 (537)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 354 (537)
.. ...+..-..+.+..++++.+....+...+ ....++.....+...+...+++ ..+++......+++++++.+
T Consensus 247 ~~--~~~~~~f~~si~~~~~n~~F~il~~~ygi----~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~ 320 (480)
T KOG2563|consen 247 QA--ALQDASFPKSIKSCFKNRQFIILAICYGI----GLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALA 320 (480)
T ss_pred Hh--hhhcCcHHHHHHHHHcCccHHHHHHHHhh----hHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHH
Confidence 00 00011124566777776664433333333 3333555555555444444444 36778888899999999999
Q ss_pred HhhhhcccCCcHH-HHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCcc
Q psy4866 355 STYYIDRAGRRVL-FLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSN 433 (537)
Q Consensus 355 ~g~l~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 433 (537)
+|.+.||.+.-+. .++......++...+.... .. ....+.......+++. ++.+..|+.+-+..|..-|.
T Consensus 321 ~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t-~~-------~~~~viv~~t~~~~g~-~~~~~~Pig~ElgvE~TyPv 391 (480)
T KOG2563|consen 321 SGIIADKTKKFKLTTLVLYLFALVGTLMLLTCT-LF-------LGDSVIVFTTCGLLGF-FGTGYLPIGFELGVETTYPV 391 (480)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh-cc-------CCceEehhhhHHHHHH-hhcCCCCcceeeeeeecccc
Confidence 9999999876544 3333333333321111111 00 1233344444444444 45667788888889986556
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc----cchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 434 MKAVSCAVINILCTTLGLISYKLFFLMDKHIG----MYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 434 ~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
.-++..|+.+..+++-+++-..+.+...+..+ +...-+.....+.+.+++..++.++
T Consensus 392 ~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 392 AEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred CCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 67999999999999999999999998888766 4433444455555555555444333
No 103
>KOG4686|consensus
Probab=99.88 E-value=2.5e-21 Score=166.84 Aligned_cols=374 Identities=13% Similarity=0.066 Sum_probs=242.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh-hhhhHHHHHH
Q psy4866 62 FLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR-IGRKWSLLMT 140 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~ 140 (537)
.++...++..|+..|-..+++........++.. |.+++.++..++.+.|+....+-+.++|++.|| +|-|..-++-
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~---d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~ 116 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKL---DSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIIL 116 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhc---ccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHH
Confidence 356677778888888889999988888888888 899999999999999999999999999999997 7877666665
Q ss_pred HHHHHHHHHHHH---HHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh--
Q psy4866 141 GPITTASWIIAM---YSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE-- 215 (537)
Q Consensus 141 ~~l~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-- 215 (537)
+....+|.++++ ..+.+|+++++||+.|+|.-...++-+.++.-|+..|+.+.++++.....-+|..+-..+.++
T Consensus 117 ~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly 196 (459)
T KOG4686|consen 117 CIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLY 196 (459)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHH
Confidence 556667777665 467999999999999999888888899999999999999999999998888887644333222
Q ss_pred --hhH------HHHH---H-HHHHHHHHHHHHhhcccCChHHHHHhCC-HHHHHHHHHhhcCCChhhHHHHHHHHHHhhh
Q psy4866 216 --LSY------MNYL---T-YSLIIPIIFTVTFMFMPESPYFYAIKNQ-EGKAIESLKWLRNKTADQVQSELQIIKQNTS 282 (537)
Q Consensus 216 --~~w------r~~~---~-~~~~~~~~~~~~~~~~~esp~~l~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (537)
++- +... . +....+...++....+ +- +++|++.+.+-.+
T Consensus 197 ~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l----------g~~D~rAerilh~e~g------------------ 248 (459)
T KOG4686|consen 197 DTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL----------GLSDDRAERILHLEEG------------------ 248 (459)
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh----------hhhhhHHHHHHhhhcC------------------
Confidence 110 0000 0 0001111111111000 00 0111111111000
Q ss_pred hcccccchHHhhc-cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhh
Q psy4866 283 KNVERTNFREFMG-RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYI 359 (537)
Q Consensus 283 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~ 359 (537)
...+.....+... .+.+|...+.+.+.... ...+....|.++++ .|.+. .++.+.........+..++.|.++
T Consensus 249 ~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva----~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~ 324 (459)
T KOG4686|consen 249 FLGEEPKLTDVNTFYPPFWVLVIICVLYYVA----WFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAIS 324 (459)
T ss_pred cccCCcccccccccCccHHHHHHHHHHHHHH----HHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhH
Confidence 0000111122222 23333333333333322 33444445666654 46663 344556666677778888999999
Q ss_pred cccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhh
Q psy4866 360 DRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSC 439 (537)
Q Consensus 360 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 439 (537)
||+|++...+.+..+..+..-....+ ..+.+...+.+++..+..... ..|..++-+.|.+..|++.
T Consensus 325 Dk~G~n~~wv~~a~~~tl~~H~~l~F-------------t~lsPy~~m~~lGLsysllAc-slWP~va~~vpE~qLGTay 390 (459)
T KOG4686|consen 325 DKYGFNLWWVASACILTLLGHSGLFF-------------TFLSPYTSMTFLGLSYSLLAC-SLWPCVASLVPEEQLGTAY 390 (459)
T ss_pred hhhcceehhHHHHHHHHHHHhhhHHh-------------hhccHHHHHHHHhhhHHHHHH-HHhhhhhhhCCHHHhcchH
Confidence 99999977766655554444333332 233455666666766655432 2467778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc-ch---hhhHhhHHHHHHHHHH
Q psy4866 440 AVINILCTTLGLISYKLFFLMDKHIGM-YS---NFLFGGVSSLVCTVYL 484 (537)
Q Consensus 440 g~~~~~~~~g~~~~~~~~g~l~~~~g~-~~---~~~~~~~~~~~~~~~~ 484 (537)
|.++.+.++|-++.|.+.|.+.|..|. .+ .|++.+.+++.+..+.
T Consensus 391 gf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil 439 (459)
T KOG4686|consen 391 GFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGIL 439 (459)
T ss_pred HHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997762 22 2334444444444443
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.86 E-value=1.2e-19 Score=180.97 Aligned_cols=329 Identities=12% Similarity=0.086 Sum_probs=209.8
Q ss_pred hHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh----hhh-hHHHHHHHHHHHHHHHHHHHHhh------
Q psy4866 88 VLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR----IGR-KWSLLMTGPITTASWIIAMYSRS------ 156 (537)
Q Consensus 88 ~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Gr-r~~l~~~~~l~~~~~~~~~~~~~------ 156 (537)
+...+.+ ++|++..++|.+.++..+..++..++.|+++|| +|| |+.++.+.+..+++.++....++
T Consensus 32 l~~~~t~---~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 32 LAYFYTD---VFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHH---hcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 3455556 899999999999999999999999999999999 786 56677787877777766555443
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhccC-CCcccchhhhHhHHHHHHHHHHHHHHh----hh-------hhHHHHHHH
Q psy4866 157 VLGLYVMRTLQGFSMAAIYVISPMYLGEIS-ETSIRGTIGTLFQISCHLGILYTYVLG----SE-------LSYMNYLTY 224 (537)
Q Consensus 157 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~i~~~l~----~~-------~~wr~~~~~ 224 (537)
+..+++..++.+.+.........++..|+. ++++|++..++...+..+|..+++.+. .. .+|+..+.+
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i 188 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMV 188 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 456666777777777777777889999998 457799888888777777776665432 21 367877777
Q ss_pred HHHHHHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHH
Q psy4866 225 SLIIPIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFV 303 (537)
Q Consensus 225 ~~~~~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (537)
.++++++..+. ++..+|.+. + + +.++.+.+..++.+++++.++..+
T Consensus 189 ~~ii~~v~~~~~~~~~~e~~~---------------------~--~----------~~~~~~~~~~~~~~~~n~~~~~l~ 235 (444)
T PRK09669 189 MGLLGVVLFFCCFFMTKERYT---------------------P--E----------VDNSSSVWKDLKLLLGNSQWRIMF 235 (444)
T ss_pred HHHHHHHHHHHHhCCeEEecC---------------------C--C----------CcCCCCHHHHHHHHhCCchHHHHH
Confidence 77776654443 333444310 0 0 000001133455566655555444
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCC-hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 304 FMAFLAVFRAFTGVQSIIAYANTIFASSETFLP-SDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
...++..... .........+.+......+ .........+..+++.++.+++.||+|+|+.+..+.++..+..+.+
T Consensus 236 ~~~~~~~~~~----~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~ 311 (444)
T PRK09669 236 IFNVVLLTAV----VTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALI 311 (444)
T ss_pred HHHHHHHHHH----HHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 4333322221 1111222222222111111 1233344556777888899999999999999887776555433322
Q ss_pred HHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCC-------ccccchhhHHHHHHHHHHHHHHHH
Q psy4866 383 GLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFS-------SNMKAVSCAVINILCTTLGLISYK 455 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~ 455 (537)
.+. .+++.+..++...+.+.+.+. ..+..+++++|..+ .+..|...|+.+.+..+|.++++.
T Consensus 312 ~~~----------~~~~~~~~~~~~~i~g~~~~~-~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~ 380 (444)
T PRK09669 312 FFI----------PPSNVWLIFALNILFNFIQNL-TTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGA 380 (444)
T ss_pred HHh----------CcchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHH
Confidence 221 012333344444555555554 34566788888875 334466788999999999999999
Q ss_pred HHHHHHHhhccc
Q psy4866 456 LFFLMDKHIGMY 467 (537)
Q Consensus 456 ~~g~l~~~~g~~ 467 (537)
+.|.+.+..|+.
T Consensus 381 i~g~ll~~~Gy~ 392 (444)
T PRK09669 381 VVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHcCCC
Confidence 999999988873
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.86 E-value=1.2e-18 Score=170.90 Aligned_cols=373 Identities=12% Similarity=0.049 Sum_probs=206.7
Q ss_pred hhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHHh-h
Q psy4866 79 GMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRI-GRKWSLLMTGPITTASWIIAMYSR-S 156 (537)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~l~~~~~~~~~~~~-~ 156 (537)
.+........+|.+..+ ++|+++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++.+... +
T Consensus 22 ~fs~Yg~~~~L~~yL~~--~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~ 99 (493)
T PRK15462 22 YFSFYGMRALLILYLTN--QLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIH 99 (493)
T ss_pred HHHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33333344555555432 6899999999999999999999999999999999 999999999999999988776543 2
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCc--ccchhhhHhHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHH
Q psy4866 157 VLGLYVMRTLQGFSMAAIYVISPMYLGEISETS--IRGTIGTLFQISCHLGILYTYVLGSEL----SYMNYLTYSLIIPI 230 (537)
Q Consensus 157 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~~~~~~~~~~ 230 (537)
...+.++..+.++|.|...+...++++|.+|++ +|..++++...+.++|..++|.+.+++ +|++.|.+.++..+
T Consensus 100 ~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~ 179 (493)
T PRK15462 100 PSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMI 179 (493)
T ss_pred hhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHH
Confidence 233444444555666777777788999999875 689999999999999999999988764 89999998776444
Q ss_pred HHHHHhhcccCChHHHHHh----CCHHHHHHHHHhhc----CCChh--hHH-HHHH-HHHHhh-hhcc-cc-c----chH
Q psy4866 231 IFTVTFMFMPESPYFYAIK----NQEGKAIESLKWLR----NKTAD--QVQ-SELQ-IIKQNT-SKNV-ER-T----NFR 291 (537)
Q Consensus 231 ~~~~~~~~~~esp~~l~~~----~~~~~a~~~~~~~~----~~~~~--~~~-~~~~-~~~~~~-~~~~-~~-~----~~~ 291 (537)
+.++.+++..+. +.+. .++.+.++...... -.... -.. .... ...... .... .. . -.+
T Consensus 180 l~li~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
T PRK15462 180 AGLVIFLCGNRH---FTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYR 256 (493)
T ss_pred HHHHHHHHhhhh---hccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333221110 0000 00000000000000 00000 000 0000 000000 0000 00 0 000
Q ss_pred HhhccchHHHH--HHHHHHHHHHHhhh----HHHHHHHHHHHHHhc--CCCCChhHHHHHHHHHHHHHhhhHhhhhcccC
Q psy4866 292 EFMGRSNMKAF--VFMAFLAVFRAFTG----VQSIIAYANTIFASS--ETFLPSDYISILFAIILLVSIFPSTYYIDRAG 363 (537)
Q Consensus 292 ~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 363 (537)
.-.++..+++. .+..++.....+.. ...+..|.....+.. |+..++.+...+..+..++.+++..++-.|..
T Consensus 257 ~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~ 336 (493)
T PRK15462 257 KAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESV 336 (493)
T ss_pred hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHh
Confidence 00011111111 11111111111111 122222222222111 33345667777777777777777666645542
Q ss_pred C--c-----HHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccc
Q psy4866 364 R--R-----VLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKA 436 (537)
Q Consensus 364 ~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 436 (537)
+ | .-..+++++.+++++.+.+...... .+...+.++.+....+. ........|+..+.++++.|++.+|
T Consensus 337 ~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~---~~~~~s~~wl~~~~~~~-t~gEl~~sPvgls~~~~laP~~~~g 412 (493)
T PRK15462 337 AGNRTVRIWGKFALGLGLMSAGFCILTLSARWSA---MYGHSSLPLMVLGLAVM-GFAELFIDPVAMSQITRIEIPGVTG 412 (493)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCCCcCHHHHHHHHHHH-HHHHHHHChHHHHHHHHhChHHHHH
Confidence 2 2 1256777777777776655332211 00112333344444444 4445667899999999999999999
Q ss_pred hhhHHHHHHH-HHHHHHHHHHHHHH
Q psy4866 437 VSCAVINILC-TTLGLISYKLFFLM 460 (537)
Q Consensus 437 ~~~g~~~~~~-~~g~~~~~~~~g~l 460 (537)
..+|+..... .+|..++..+.+..
T Consensus 413 ~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 413 VLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999986533 46655555554443
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.85 E-value=7.5e-20 Score=182.18 Aligned_cols=380 Identities=14% Similarity=0.085 Sum_probs=230.4
Q ss_pred HHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhh-----hhHHHHHHHHHH
Q psy4866 70 TACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIG-----RKWSLLMTGPIT 144 (537)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~l~ 144 (537)
++....+..|+..-....+.|.+.+ ++|+|.++++...+...+...+-.+ +|+++||++ ||+.++++.++.
T Consensus 30 ~~~~~y~~qGl~~l~~~~~~~~l~~---~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 30 IGLQVLFVKGIAGLMRLPLSPMLTD---DLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHhhHHHHhhhhhhHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 3344456677773334444566666 7999999999999999999999776 999999998 788888887776
Q ss_pred H-HHHHHHHHHhhHHHH-HHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHh---HHHHHHHHHHHHHHhhh----
Q psy4866 145 T-ASWIIAMYSRSVLGL-YVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLF---QISCHLGILYTYVLGSE---- 215 (537)
Q Consensus 145 ~-~~~~~~~~~~~~~~l-~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~---~~~~~~G~~i~~~l~~~---- 215 (537)
. +.....+..++.... .+..++.+++.+...++..++..|..+ +++....+.. .....+|.++++.+++.
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~ 184 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK 184 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 443334444554444 448999999999999999999999998 5554433333 22233666666666554
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhc
Q psy4866 216 LSYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMG 295 (537)
Q Consensus 216 ~~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (537)
++||..|++.+.+.++..+..++++|++.....+.+ ++.. .. .........+ ...+.....+..++
T Consensus 185 ~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~-~~~~--------~~--~~~~~~~~~~---~~~~~~~~l~~~l~ 250 (468)
T TIGR00788 185 TLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIG-TYLE--------MN--MALLTLGVLA---NVKVQILGLRGAIQ 250 (468)
T ss_pred cCcchHHHHHHHHHHHHHHHHHhccccccccccccc-ccch--------hh--hhhhhhhHHH---HHHHHHHHHHHHHh
Confidence 589999999988887776666777876310000000 0000 00 0000000000 00000112223343
Q ss_pred cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHH
Q psy4866 296 RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETF-LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAG 374 (537)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 374 (537)
++..+..+...++.+.........+..+.+ ...|.+ ...+....+.+++.+++..+.+++.+|++.|+.+.++.++
T Consensus 251 ~~~i~~~l~fifl~~~~~~~~~~~~f~~~~---~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l 327 (468)
T TIGR00788 251 LLEIAKPLIFIFLSYANLPGASGSVFCATT---QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLL 327 (468)
T ss_pred cHHHHHHHHHHHHHHhhcCCCCceeEEEEc---ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 333333222222211111110000000111 223444 2455666777899999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHH
Q psy4866 375 CSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISY 454 (537)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 454 (537)
.+++.+.......... .... ....+.......+...+.+..+.+. ..++.+..|++.+|+..++.+.+.++|..+++
T Consensus 328 ~~~~~~~~~~l~~~~~-~~~g-i~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~ 404 (468)
T TIGR00788 328 YTLSSLFDLILVKRWN-LAFG-ISDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSG 404 (468)
T ss_pred HHHHHhCceeeeeccc-cccC-CCCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHH
Confidence 7776644321110000 0000 0112334444555666666666665 48999999999999999999999999999999
Q ss_pred HHHHHHHHhhc-----cchhhhHhh
Q psy4866 455 KLFFLMDKHIG-----MYSNFLFGG 474 (537)
Q Consensus 455 ~~~g~l~~~~g-----~~~~~~~~~ 474 (537)
.+.+.+.+..| +...+....
T Consensus 405 ~~gg~l~~~~g~~~~~~~~~~~~i~ 429 (468)
T TIGR00788 405 FLGVLLMETIGITCDNSNNLWLLIL 429 (468)
T ss_pred HHHHHHHHHcCCCcccccchHHHHH
Confidence 99999999888 555444433
No 107
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.85 E-value=1.4e-20 Score=177.80 Aligned_cols=365 Identities=16% Similarity=0.125 Sum_probs=222.0
Q ss_pred hhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHH--HHHHHHHHHH-HHH-
Q psy4866 79 GMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTG--PITTASWIIA-MYS- 154 (537)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~--~l~~~~~~~~-~~~- 154 (537)
-+..+...|..+...++ +.|+|.+++|.+.++..+...+.+++.|.++||+|.||-++..+ ++...+.... .+.
T Consensus 20 Ff~~gi~~pF~~iWL~~--~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~p 97 (412)
T PF01306_consen 20 FFIWGIFLPFFPIWLTQ--VAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGP 97 (412)
T ss_dssp HHHHHHHHHHHHHHHHH--HH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHcc--ccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455666777666651 47999999999999999999999999999999999655444332 2222222222 222
Q ss_pred ---hhHH-HHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh---hHHHHHHHHHH
Q psy4866 155 ---RSVL-GLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL---SYMNYLTYSLI 227 (537)
Q Consensus 155 ---~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~---~wr~~~~~~~~ 227 (537)
.|++ ..+++-+..|++.....++.-+++.++. ++.+.=.|-.-+..++|.+++..+++.+ +-+..||+...
T Consensus 98 ll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~ 175 (412)
T PF01306_consen 98 LLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASA 175 (412)
T ss_dssp HHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHH
Confidence 2332 2333444455555555566666665554 2234444555556666666666666552 55677887776
Q ss_pred HHHHHHHHhhcc-cCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccc---hHHhhccchHHHHH
Q psy4866 228 IPIIFTVTFMFM-PESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTN---FREFMGRSNMKAFV 303 (537)
Q Consensus 228 ~~~~~~~~~~~~-~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 303 (537)
.+++..++.++. |+.++. ....+ ....++++.+ ..+++|.+..|.+.
T Consensus 176 ~~~il~lll~~~~~~~~~~----------------~~~~~-------------~~~~~~~~~~~~~~~~l~k~~~fw~~~ 226 (412)
T PF01306_consen 176 AAIILLLLLLLLKPDVPPQ----------------AEVAD-------------ALGAKKDKVSLKDVLSLFKMRNFWFFV 226 (412)
T ss_dssp HHHHHHHHHHSS---SSSS----------------S-SST-------------TSSS------HHHHHHHTTSHHHHHHH
T ss_pred HHHHHHHHHHHcCCcCchh----------------hhhhc-------------ccccCCCCCcHHHHHHHhcchhHHHHH
Confidence 666555444433 333210 00000 0000111222 33455555544433
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-----ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHH
Q psy4866 304 FMAFLAVFRAFTGVQSIIAYANTIFASSETFL-----PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLF 378 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 378 (537)
+....... .+..+....+.|+.....+. .-++...+..+..++...+..++.+|+|.|+.++++..++.+-
T Consensus 227 l~v~g~~~----~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iR 302 (412)
T PF01306_consen 227 LFVIGVAA----IYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIR 302 (412)
T ss_dssp HHHHHHHH----HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHH
Confidence 32222222 24444444455555432221 1225556667778888899999999999999999999998888
Q ss_pred HHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHH-HHHHHHHHHHHHHHH
Q psy4866 379 SFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVI-NILCTTLGLISYKLF 457 (537)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~~~~~~~ 457 (537)
....++. ++.+...+.-.+-+.-+.....+. .-|+.+.+|++..++...+. +...++|.++.+.+.
T Consensus 303 i~~~~~~------------~~~~~i~~~klLH~~e~~l~lva~-fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~ 369 (412)
T PF01306_consen 303 IIGSGFA------------TNPWVISLIKLLHALEFPLLLVAA-FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLA 369 (412)
T ss_dssp HHHHHT--------------SHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred HHHHhhh------------cchHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 7777663 355566666666677666655554 48999999999988988885 677899999999999
Q ss_pred HHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCC
Q psy4866 458 FLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKG 493 (537)
Q Consensus 458 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (537)
|.+.|+.|++.++++++.+.+...++..+.+++.++
T Consensus 370 G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 370 GYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 999999999989999998888888887777655443
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.84 E-value=7.5e-19 Score=174.47 Aligned_cols=331 Identities=14% Similarity=0.182 Sum_probs=233.9
Q ss_pred hHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhh----hhhhh-HHHHHHHHHHHHHHHHHHHH-h------
Q psy4866 88 VLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVN----RIGRK-WSLLMTGPITTASWIIAMYS-R------ 155 (537)
Q Consensus 88 ~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~d----r~Grr-~~l~~~~~l~~~~~~~~~~~-~------ 155 (537)
..+.+.+ .+|+++..+|.+..+..+-.++..|+.|.++| |+||| +.++++.++.+++.+++... +
T Consensus 24 ~~~f~~~---~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 24 LLYFYTD---VLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHH---HcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 3455666 78999999999999999999999999999999 89965 55667888888887777665 4
Q ss_pred -hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCC-CcccchhhhHhHHHHHHHHHHHHHHhhh----h-------hHHHHH
Q psy4866 156 -SVLGLYVMRTLQGFSMAAIYVISPMYLGEISE-TSIRGTIGTLFQISCHLGILYTYVLGSE----L-------SYMNYL 222 (537)
Q Consensus 156 -~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~-------~wr~~~ 222 (537)
....+.+.-++..++.........++..|..+ +++|.+..+.-..+..+|.++...+... + +|++..
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 23445777777899999999999999999997 4689999999888888888654443322 1 588888
Q ss_pred HHHHHHHHHHHHH-hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHH
Q psy4866 223 TYSLIIPIIFTVT-FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKA 301 (537)
Q Consensus 223 ~~~~~~~~~~~~~-~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (537)
++.+++.++..+. .+..+|.++ +.+++.++.+-+..++.+++++.+..
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke~~~-------------------------------~~~~~~~~~~~~~~~~~~~~nr~~~~ 229 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKERSV-------------------------------EVTEQEKKISLRDSLRSLFRNRPFRI 229 (428)
T ss_pred HHHHHHHHHHhhhhhheeeeccc-------------------------------cccccccccccccchhhhcccchHHH
Confidence 8888887765544 445665210 00001111112455666776665555
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHH
Q psy4866 302 FVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSF 380 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 380 (537)
.+....+..+.... ...+.+.+.+.. +..........+..+..+++.++.++++||+|+|+.+..+.++.+++.+
T Consensus 230 l~~~~~~~~~~~~~----~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~ 305 (428)
T PF13347_consen 230 LLLAFFLQWLAFAL----MNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFL 305 (428)
T ss_pred HHHHHHHHHhhhhh----hhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHH
Confidence 55544444443332 233333333332 2222334556677888899999999999999999999999999888887
Q ss_pred HHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCC-------ccccchhhHHHHHHHHHHHHHH
Q psy4866 381 IAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFS-------SNMKAVSCAVINILCTTLGLIS 453 (537)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~ 453 (537)
.+.+.. ..+.+..++...+.+.+.+... ...+++.+|+.+ ++..|...|+.++...++..++
T Consensus 306 ~~~~~~----------~~~~~~~~i~~~l~gi~~~~~~-~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la 374 (428)
T PF13347_consen 306 LLFFLG----------PGSPWLVLILFILAGIGYGAFF-VIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLA 374 (428)
T ss_pred HHHHHH----------hhhHHHHHHHHHHhHhhhcccc-cccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHH
Confidence 776642 1245556666666666665544 566788898876 3446889999999999999999
Q ss_pred HHHHHHHHHhhccc
Q psy4866 454 YKLFFLMDKHIGMY 467 (537)
Q Consensus 454 ~~~~g~l~~~~g~~ 467 (537)
+.+.+.+.+..|+.
T Consensus 375 ~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 375 GAIVGLLLALVGYD 388 (428)
T ss_pred HHHHHHHHHHhCcC
Confidence 99999998877754
No 109
>PRK11462 putative transporter; Provisional
Probab=99.84 E-value=2.6e-18 Score=171.06 Aligned_cols=322 Identities=12% Similarity=0.059 Sum_probs=199.0
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh----hhh-hHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHH
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR----IGR-KWSLLMTGPITTASWIIAMYSRS------VLGLYVMRTL 166 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Gr-r~~l~~~~~l~~~~~~~~~~~~~------~~~l~~~r~l 166 (537)
..|++...+|.+..+.-+--++..|+.|.++|| +|| |+.++++.+..+++.+++-..++ +..+++.-++
T Consensus 39 ~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~ 118 (460)
T PRK11462 39 IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTL 118 (460)
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHH
Confidence 789999999999999999999999999999996 786 46666787888877766654442 3456667777
Q ss_pred HHhHhhhhhhhhhhhhhccCC-CcccchhhhHhHHHHHHHHHHHHHHhhh-----------hhHHHHHHHHHHHHHHHHH
Q psy4866 167 QGFSMAAIYVISPMYLGEISE-TSIRGTIGTLFQISCHLGILYTYVLGSE-----------LSYMNYLTYSLIIPIIFTV 234 (537)
Q Consensus 167 ~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~l~~~-----------~~wr~~~~~~~~~~~~~~~ 234 (537)
..++.........++..|..+ +++|++..++...+..+|..+++.+... .+|+....+.+++.++..+
T Consensus 119 ~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~ 198 (460)
T PRK11462 119 LTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLA 198 (460)
T ss_pred HHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 788888888889999999986 6889999999998888887776555321 2467666666666555443
Q ss_pred Hh-hcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHH
Q psy4866 235 TF-MFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRA 313 (537)
Q Consensus 235 ~~-~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (537)
.. ...+|.++- + .++.+.+..++..++++.++.......+.....
T Consensus 199 i~~~~~kE~~~~--------------------~--------------~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~ 244 (460)
T PRK11462 199 FCFFTTKERVEA--------------------P--------------PTTTSMREDLRDIWQNDQWRIVGLLTIFNILAV 244 (460)
T ss_pred HHHhcceeccCC--------------------C--------------ccCCCHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 33 334443200 0 000001223344555444443333333332222
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccc
Q psy4866 314 FTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQ 393 (537)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (537)
.. ......|...+.- +.............+..+++.++++++.||+++|+....+..+..+..+++.+..
T Consensus 245 ~~-~~~~~~y~~~y~~--g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~------- 314 (460)
T PRK11462 245 CV-RGGAMMYYVTWIL--GTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVP------- 314 (460)
T ss_pred HH-HHhHhhhhhhhhc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 22 2222233333321 1111122445566788888999999999999999887655544433333322210
Q ss_pred cCCcccchhhHHHHHHHHHHHhhccccchhhhccccCC-------ccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 394 YEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFS-------SNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGM 466 (537)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 466 (537)
....+...+..++.+.+.+ ...++.+++..|..+ .+..|...+.......+|.++++.+.|.+.+..|+
T Consensus 315 ---~~~~~~~~~~~~l~g~~~~-~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 315 ---MQASITMFVFIFVIGVLHQ-LVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred ---hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1112222333333444332 234445567776654 33335556777789999999999999999887776
Q ss_pred c
Q psy4866 467 Y 467 (537)
Q Consensus 467 ~ 467 (537)
.
T Consensus 391 ~ 391 (460)
T PRK11462 391 D 391 (460)
T ss_pred C
Confidence 3
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.83 E-value=2.5e-18 Score=171.90 Aligned_cols=325 Identities=9% Similarity=0.069 Sum_probs=194.3
Q ss_pred HhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhh----hhhH-HHHHHHHHHHHHHHHHHHHh-------hH
Q psy4866 90 EELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRI----GRKW-SLLMTGPITTASWIIAMYSR-------SV 157 (537)
Q Consensus 90 ~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~----Grr~-~l~~~~~l~~~~~~~~~~~~-------~~ 157 (537)
+.+.+ .+|++..++|.+.+...+..++..++.|+++||. |||| .++++.+...+..++....+ ..
T Consensus 33 ~y~~~---~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (448)
T PRK09848 33 SYYTD---VAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKV 109 (448)
T ss_pred HHHHH---HcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHH
Confidence 45555 7899999999999999999999999999999996 7666 44566555554444432111 22
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhccCCC-cccchhhhHhHHH-----HHHHHHHHHHHhhhh------hHHHHHHHH
Q psy4866 158 LGLYVMRTLQGFSMAAIYVISPMYLGEISET-SIRGTIGTLFQIS-----CHLGILYTYVLGSEL------SYMNYLTYS 225 (537)
Q Consensus 158 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~~G~~i~~~l~~~~------~wr~~~~~~ 225 (537)
..+++.-++.+++.+...+...++..+...+ ++|.+..++-..+ ..+|..++|.++... +|.....+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~ 189 (448)
T PRK09848 110 VYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVL 189 (448)
T ss_pred HHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 3345556778888888888788887777654 6688876665443 334555566655432 121111222
Q ss_pred HHHHHHHH-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHH
Q psy4866 226 LIIPIIFT-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVF 304 (537)
Q Consensus 226 ~~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (537)
++++++.. +.....||++. .+ .++...+..++.+++++......+
T Consensus 190 ~v~~~~~~~~~~~~~~e~~~-------------------~~---------------~~~~~~~~~~~~l~~n~~f~~~~~ 235 (448)
T PRK09848 190 AIAGMVLYFICFKSTRENVV-------------------RI---------------VAQPSLKISLQTLKRNRPLFMLCI 235 (448)
T ss_pred HHHHHHHHHHHHcCcEeccC-------------------CC---------------ccCCCHHHHHHHHhCCchHHHHHH
Confidence 22332222 22233455420 00 000001223455666555443333
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCCChh-HHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 305 MAFLAVFRAFTGVQSIIAYANTIFASS-ETFLPSD-YISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
..++... +......+.+.+++.. +.+.... .......++.+++.++.+++.||+++|+.+..+.++..++.+.+
T Consensus 236 ~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~ 311 (448)
T PRK09848 236 GALCVLI----STFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLF 311 (448)
T ss_pred HHHHHHH----HHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3333322 2333344455555443 2211111 22222345677888999999999999999999888777776655
Q ss_pred HHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCcc-------ccchhhHHHHHHHHHHHHHHHH
Q psy4866 383 GLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSN-------MKAVSCAVINILCTTLGLISYK 455 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~g~~~~~~~~g~~~~~~ 455 (537)
.+. . ..+.+...+...+.+.+.+... +...++..|..|.+ .+|...|+.+....+|.++++.
T Consensus 312 ~~~---~-------~~~~~~~~~~~~l~g~G~~~~~-~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 312 FWV---S-------VWSLPVALVALAIASIGQGVTM-TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred HHc---C-------chhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 431 0 1123333344445555554443 44557777776543 4589999999999999999999
Q ss_pred HHHHHHHhhcc
Q psy4866 456 LFFLMDKHIGM 466 (537)
Q Consensus 456 ~~g~l~~~~g~ 466 (537)
+.+.+.+..|+
T Consensus 381 i~g~~l~~~G~ 391 (448)
T PRK09848 381 IPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHcCC
Confidence 99999887776
No 111
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.82 E-value=4.5e-17 Score=160.45 Aligned_cols=352 Identities=16% Similarity=0.168 Sum_probs=229.7
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHhhhhhhhhH-HHHHHHHHHHHHHHHHHHH-h-hHHHHHHHHHHHHhHhhhhhhhhhhh
Q psy4866 105 EGSWVVAIIEIGNYLSPIPAGMLVNRIGRKW-SLLMTGPITTASWIIAMYS-R-SVLGLYVMRTLQGFSMAAIYVISPMY 181 (537)
Q Consensus 105 ~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~l~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~~~ 181 (537)
..++..++..+-.++..++.|.++|+-|+|| .+.+..++..+.+.+..+. + +++...+.-++.-++.+...+...++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578889999999999999999999999655 4555566666677776664 2 45555566666677888888999999
Q ss_pred hhccCCCccc--------------------------chhhhHhHHHHHHHHHHHHHHhhhh------------hHHHHHH
Q psy4866 182 LGEISETSIR--------------------------GTIGTLFQISCHLGILYTYVLGSEL------------SYMNYLT 223 (537)
Q Consensus 182 i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~i~~~l~~~~------------~wr~~~~ 223 (537)
+.|..+++++ ++..+.-.....+|.++.-++.-.+ +-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999998888 8988888777788887765554331 2477777
Q ss_pred HHHHHHHH-HHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHH
Q psy4866 224 YSLIIPII-FTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAF 302 (537)
Q Consensus 224 ~~~~~~~~-~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (537)
+.++.-++ .+...+++||.|+. +..+ ...........+. ...++++.+ .+-
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~---~~~~------------~~~~~~~~g~~~l---------~~t~k~~~~----~~~ 282 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGP---RPLP------------SGSSYLRFGFKRL---------WRTFKEIRK----LRQ 282 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCC---CCCC------------cchhHHHHHHHHH---------HHHHHHHHh----ChH
Confidence 77777555 44556677877621 0000 0000000000000 112222222 222
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHH-hcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCc--HHHHHhhHHHHHH
Q psy4866 303 VFMAFLAVFRAFTGVQSIIAYANTIFA-SSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRR--VLFLVSSAGCSLF 378 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~~ 378 (537)
+..+.+..+...-+...+......|.. ..+++. +.....++..+.+++|.++.+++.||+|.| +.+....++..+.
T Consensus 283 ~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i 362 (477)
T PF11700_consen 283 LFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIII 362 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 333444444444556667777676666 446553 233566678899999999999999999999 7766665555332
Q ss_pred HHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHH
Q psy4866 379 SFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFF 458 (537)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 458 (537)
.+.-.+.. ... .. ...+.+...+...+.+.+.+. ..+..-++.+|+.|+++.+..+|++...+...+++||.++|
T Consensus 363 ~~~g~~G~-~~~--~~-g~~~~~~f~~~a~~~G~~~G~-~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 363 PLYGLFGF-WPS--FF-GLKSPWEFWVLAVLIGLFMGG-IQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHh-hhc--cc-CcccHHHHHHHHHHHHHHhhh-HHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22221100 000 00 012344455555555555543 45667799999999999999999999999999999999999
Q ss_pred HHHHhhc-cchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 459 LMDKHIG-MYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 459 ~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
.+.+..| .+..+....++.+++.++. ...+.
T Consensus 438 ~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~ 469 (477)
T PF11700_consen 438 LITDATGSQRYGFLFLLVLFLIGLILL-FFVDV 469 (477)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHH-hhccc
Confidence 9999987 5677777777777776665 44433
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.81 E-value=1e-17 Score=159.89 Aligned_cols=338 Identities=13% Similarity=0.077 Sum_probs=228.6
Q ss_pred hccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh----hhh-hHHHHHHHHHHHHHHHHHHHHhh
Q psy4866 82 FAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR----IGR-KWSLLMTGPITTASWIIAMYSRS 156 (537)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Gr-r~~l~~~~~l~~~~~~~~~~~~~ 156 (537)
.......+..+-.+ .+|++...+|.+..+.-+--++..|+.|.++|| +|| |+.++.+.+.+++.+.++-.+++
T Consensus 28 ~~~~~~yLl~fYTd--v~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~ 105 (467)
T COG2211 28 FGIVVLYLLFFYTD--VFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD 105 (467)
T ss_pred HHHHHHHHHHHHhc--ccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC
Confidence 33333334344332 789999999999999999999999999999996 785 67788888999998888877773
Q ss_pred ------HHHHHHHHHHHHhHhhhhhhhhhhhhhccCC-CcccchhhhHhHHHHHHHHHHHHHHhhh-----------hhH
Q psy4866 157 ------VLGLYVMRTLQGFSMAAIYVISPMYLGEISE-TSIRGTIGTLFQISCHLGILYTYVLGSE-----------LSY 218 (537)
Q Consensus 157 ------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~l~~~-----------~~w 218 (537)
....++.-++.+++.........++..|+.+ ++||.+..++-+.+..+|.++...+... .+|
T Consensus 106 ~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~ 185 (467)
T COG2211 106 FSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGY 185 (467)
T ss_pred cccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhH
Confidence 4556778899999999999999999999984 5789999999999999997665444321 368
Q ss_pred HHHHHHHHHHHHHHHHHhh-cccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhh--hhcccccchHHhhc
Q psy4866 219 MNYLTYSLIIPIIFTVTFM-FMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNT--SKNVERTNFREFMG 295 (537)
Q Consensus 219 r~~~~~~~~~~~~~~~~~~-~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 295 (537)
+..-++.++++++..+..+ -.+|.+. +. ++.+ .+.+.+..+..+++
T Consensus 186 ~~~~~~~~vi~~i~~l~~~~~v~ER~~-------------------~~------------~~~~~~~~~~~~~~~~~~~~ 234 (467)
T COG2211 186 QGTALVLGVIGVILLLFCFFNVKERVV-------------------ET------------QPTKTGVKLKLKDSFLLIFK 234 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccC-------------------cc------------ccCcccccccHHHHHHHHHc
Confidence 8777777777766554443 3555431 00 0000 00000222334555
Q ss_pred cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhH
Q psy4866 296 RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSA 373 (537)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 373 (537)
++.+....+...+.. .+.+.......+|.+.. +..+ .+.........+.+++.++..++.+|+|+|+++..+.+
T Consensus 235 Nrp~~~~l~~~l~~~----~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~ 310 (467)
T COG2211 235 NRPLLLLLLMNLLLF----IAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLL 310 (467)
T ss_pred cchHHHHHHHHHHHH----HHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHH
Confidence 544433333222222 22333333333333322 2211 22344555566667778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCC-------ccccchhhHHHHHHH
Q psy4866 374 GCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFS-------SNMKAVSCAVINILC 446 (537)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~ 446 (537)
+..++.+++.+.. ..+.+..++..++.+.+.+. ..++.+++++|... .+..|...|...++.
T Consensus 311 ~~~i~~~~~~f~~----------~~~~~l~~~~~~i~~~g~~~-~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~ 379 (467)
T COG2211 311 LLAVGYLLLYFTP----------AGSVVLIVVALIIAGVGTGI-ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFR 379 (467)
T ss_pred HHHHHHHHHHhhc----------CcchHHHHHHHHHHHHHhhc-cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHH
Confidence 8888888777642 12333444444555555544 55788899988853 445688899999999
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q psy4866 447 TTLGLISYKLFFLMDKHIGMY 467 (537)
Q Consensus 447 ~~g~~~~~~~~g~l~~~~g~~ 467 (537)
-+|.+++..+.|++.+..|+.
T Consensus 380 K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 380 KLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999987753
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.80 E-value=3.5e-17 Score=153.96 Aligned_cols=269 Identities=13% Similarity=0.105 Sum_probs=184.1
Q ss_pred HHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----------------
Q psy4866 152 MYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE---------------- 215 (537)
Q Consensus 152 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~---------------- 215 (537)
+...+|+.++++-|+.|.|.+...+..+.++++..+++++.+.+++.+...++|.+++|.++..
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 3567899999999999999999999999999999999999999999999999999999999863
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHhhc--ccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccc
Q psy4866 216 ----LSYMNYLTYSLIIPIIFTVTFMF--MPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTN 289 (537)
Q Consensus 216 ----~~wr~~~~~~~~~~~~~~~~~~~--~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (537)
..|+++|++.+.+.++..+.+.+ +||... + + + + +...++ ...
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~--------------~--~--~------~~~~~~--~~~ 132 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------A--------------D--V--A------RVSSGD--TTQ 132 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------c--------------c--c--c------cccccc--ccc
Confidence 25889998666665444444333 354310 0 0 0 0 000000 001
Q ss_pred hHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc---CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCc
Q psy4866 290 FREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASS---ETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRR 365 (537)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 365 (537)
.++.++++. .+...+..++.......+..|.+.|+.+. +.+. ........+..+.++|+++++++.||+++|
T Consensus 133 ~~~~~~~~~----~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~ 208 (310)
T TIGR01272 133 KTSAFQFTH----LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG 208 (310)
T ss_pred hhhHHhhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 112222222 33334444444445667788888888653 4432 345677788899999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHH
Q psy4866 366 VLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINIL 445 (537)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 445 (537)
+.+..+..+..++.+++... +.........+++.+.+..+ |...+...+..|++ .+++.++. ..
T Consensus 209 ~~l~~~~~l~~~~~~l~~~~-------------~~~~~~~~~~l~g~~~s~i~-P~~~s~a~~~~~~~-~~~asai~-~~ 272 (310)
T TIGR01272 209 RYLAFNAFLAVLLSIGAALT-------------HGYVAMWFVLALGLFNSIMF-PTIFSLALNALGRH-TSQGSGIL-CL 272 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHc-------------CCHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhh-hhhhHHHH-HH
Confidence 98887776666655433321 12223334445666655544 55557777777764 56777775 56
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhhH
Q psy4866 446 CTTLGLISYKLFFLMDKHIGMYSNFLF 472 (537)
Q Consensus 446 ~~~g~~~~~~~~g~l~~~~g~~~~~~~ 472 (537)
+.+|+++.|.+.|.+.|..|.+.++++
T Consensus 273 ~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 273 AIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred HHhcchHHHHHHHHHHHhccchHHHHH
Confidence 789999999999999999898777653
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=1.6e-15 Score=140.24 Aligned_cols=345 Identities=13% Similarity=0.086 Sum_probs=226.4
Q ss_pred CChhhHHHHHHHHHHhhhhhhhHHhhhhhhh-hHHHHHHHHHHHHHHHHHHHHhh--H-HHHHHHHHHHHhHhhhhhhhh
Q psy4866 103 PNEGSWVVAIIEIGNYLSPIPAGMLVNRIGR-KWSLLMTGPITTASWIIAMYSRS--V-LGLYVMRTLQGFSMAAIYVIS 178 (537)
Q Consensus 103 ~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~l~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~~~~~~~~ 178 (537)
.+..+...++..+-.++..++.|.++|+.|+ |+.+-....+..++..+..++++ + +..++.-.+..++.....+..
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3456888899999999999999999999995 55555666666677777777665 4 445566788889999999999
Q ss_pred hhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----------------------hhHHHHHHHHHHHHHHHH-HH
Q psy4866 179 PMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----------------------LSYMNYLTYSLIIPIIFT-VT 235 (537)
Q Consensus 179 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----------------------~~wr~~~~~~~~~~~~~~-~~ 235 (537)
.+++.+..++++-++..++-.....+|..+.-++... ..-|..+.+.++..++.. ..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 9999999999888888777655555665554333211 135777777777665544 44
Q ss_pred hhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhh
Q psy4866 236 FMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFT 315 (537)
Q Consensus 236 ~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (537)
++.+++.++- .............+. +.+++++.+++... .+.+..+...-
T Consensus 217 ~~~v~~~~~~-----------------~~~~~~~l~~g~k~L---------~~t~k~i~~~~~i~----~FLiA~~~~~D 266 (438)
T COG2270 217 ILNVHDAEKI-----------------SSPPPTALRNGFKEL---------KSTFKEIRGRKNLV----LFLIARFFYID 266 (438)
T ss_pred Hhcccccccc-----------------cccchHHHHHHHHHH---------HHHHHHHhcccchH----HHHHHHHHHHh
Confidence 4555554310 000000011111111 33444444433322 23333333334
Q ss_pred hHHHHHHHHHHHHH-hcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccc
Q psy4866 316 GVQSIIAYANTIFA-SSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQ 393 (537)
Q Consensus 316 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (537)
+.+.+..+...+-. ..+.+. +-........+.+++|+++.|++.||+|.|+++..+.++..+..+...+.
T Consensus 267 Gv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~-------- 338 (438)
T COG2270 267 GVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL-------- 338 (438)
T ss_pred hHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc--------
Confidence 56666666666665 456553 23356667789999999999999999999999988888777766655442
Q ss_pred cCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hhhhH
Q psy4866 394 YEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMY-SNFLF 472 (537)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~-~~~~~ 472 (537)
.......+...+++.+.+. ..+..-++..+.+|+++.++.+|+++..+...++.+|.+.+.+.+.+|.. ..+..
T Consensus 339 ----~~~~~f~i~gll~g~s~G~-~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~ 413 (438)
T COG2270 339 ----EGELDFWILGLLVGTSLGG-AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLS 413 (438)
T ss_pred ----cccHHHHHHHHHHHHhcch-HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHH
Confidence 2233334444445555443 44556789999999999999999999999999999999999999887754 33444
Q ss_pred hhHHHHHHHHHHHhhccCC
Q psy4866 473 GGVSSLVCTVYLYYFLLET 491 (537)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~ 491 (537)
..++..++.++. ...|..
T Consensus 414 i~vll~iGl~~L-~~v~~~ 431 (438)
T COG2270 414 IIVLLLIGLLLL-LRVKVP 431 (438)
T ss_pred HHHHHHhhHhhE-EeecCC
Confidence 444444444433 344433
No 115
>KOG2325|consensus
Probab=99.75 E-value=6e-17 Score=155.00 Aligned_cols=386 Identities=15% Similarity=0.126 Sum_probs=223.6
Q ss_pred HHHHhhhhhhhhhccchhhHHhhhc-CCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhh-hHHHHHHHHHHHHH
Q psy4866 70 TACIAAFTTGMSFAWSAPVLEELLS-KESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGR-KWSLLMTGPITTAS 147 (537)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~l~~~~ 147 (537)
+..+..|+.+...+.+.+..-.+.+ . |.+.+.+..|++.++..+|.++++++.|++..|.|. |+.++.|.++.++|
T Consensus 38 l~~~~sfl~~v~~sI~~~s~wpYl~~l--D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g 115 (488)
T KOG2325|consen 38 LALLNSFLVAVQFSIYLTSMWPYLQKL--DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIG 115 (488)
T ss_pred HHHHHHHHHhhhheEEEeecchhhhhc--CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHH
Confidence 3444566677777777666544444 2 477888889999999999999999999999999996 88899999999999
Q ss_pred HHHH-HHH---h-hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh------
Q psy4866 148 WIIA-MYS---R-SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL------ 216 (537)
Q Consensus 148 ~~~~-~~~---~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~------ 216 (537)
+++. ++. + ..+.++++|++.|+|.|.. ...-+|+++....++|.++++....+..+|.++||.++..+
T Consensus 116 ~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~ 194 (488)
T KOG2325|consen 116 NLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK 194 (488)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC
Confidence 9988 332 2 5788999999999997655 67889999988888999999999998899999998887553
Q ss_pred h-----------HHHHHHHHHHHHHHHH-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhc
Q psy4866 217 S-----------YMNYLTYSLIIPIIFT-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKN 284 (537)
Q Consensus 217 ~-----------wr~~~~~~~~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (537)
| +..+-|+.+++.++.+ ++.+++.|.++- .++++.+.+ ++.+.+.
T Consensus 195 G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~-------------------~~~~~~~~~-~~~~~~~--- 251 (488)
T KOG2325|consen 195 GFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG-------------------IIDKKKRSV-EEEKSDI--- 251 (488)
T ss_pred ceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC-------------------ccccccccc-hhhccch---
Confidence 1 2346677777776644 444556666421 000000000 0000000
Q ss_pred ccccchHHhhc-cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-Chh-HHHHHHHHHHHHHh---hhHhhh
Q psy4866 285 VERTNFREFMG-RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSD-YISILFAIILLVSI---FPSTYY 358 (537)
Q Consensus 285 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~---~~~g~l 358 (537)
.+.-. +..+...+.+....+...+.....-..+.+......+... .+. +......+.+++.. +...+.
T Consensus 252 ------~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~ 325 (488)
T KOG2325|consen 252 ------EKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFT 325 (488)
T ss_pred ------hhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 00001 1222222333333333222222222223333333444432 222 22223333333322 222222
Q ss_pred h-cccCCcHHHHHhhHHHHHHHHHHHHHHHhhh-----------ccccC-------CcccchhhHHH--HHHHHHHHhhc
Q psy4866 359 I-DRAGRRVLFLVSSAGCSLFSFIAGLYYYVTI-----------ELQYE-------IPYTSWVPFLS--ISLLGVFFNLG 417 (537)
Q Consensus 359 ~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~ 417 (537)
. .++.+|+.+..++.+...+..+....+.... +++.+ .+..++..++. .++++.++-..
T Consensus 326 ~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~ 405 (488)
T KOG2325|consen 326 RLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFI 405 (488)
T ss_pred HhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccc
Confidence 2 2334445544443333333322221111110 00000 00001111111 12222222221
Q ss_pred cccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhc
Q psy4866 418 FGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFL 488 (537)
Q Consensus 418 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 488 (537)
..+ ..+.-+|...+..+++..|+......++..++|.+...+....|.+..+.+.++..++...+...+.
T Consensus 406 ~~~-~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~ 475 (488)
T KOG2325|consen 406 STA-LDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFL 475 (488)
T ss_pred cch-HHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 222 3367788888899999999999999999999999999999999999777666665555554443433
No 116
>KOG3626|consensus
Probab=99.72 E-value=7.3e-16 Score=153.59 Aligned_cols=294 Identities=14% Similarity=0.160 Sum_probs=207.2
Q ss_pred HHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHH
Q psy4866 66 FLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITT 145 (537)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~ 145 (537)
..+++.++..+..++..+++...+..+.+ .|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|+++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiEr---RF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIER---RFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMG 173 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhh---hcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHH
Confidence 45566777788888888999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh--------------------------------------------------h-HH-HHHHHHHHHHhHhhh
Q psy4866 146 ASWIIAMYSR--------------------------------------------------S-VL-GLYVMRTLQGFSMAA 173 (537)
Q Consensus 146 ~~~~~~~~~~--------------------------------------------------~-~~-~l~~~r~l~G~~~~~ 173 (537)
++++++++-+ + ++ .++++.++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 9999998730 0 23 566789999999999
Q ss_pred hhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-----------------------hHHHHHHHHHHHHH
Q psy4866 174 IYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-----------------------SYMNYLTYSLIIPI 230 (537)
Q Consensus 174 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----------------------~wr~~~~~~~~~~~ 230 (537)
.++.+.+|+-|...+++-+..+++......+|.++|.+++++. .|+.-|++.+.+.+
T Consensus 254 i~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLL 333 (735)
T ss_pred CccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998763 37778888888888
Q ss_pred HHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhc---cchHHHHHHHHH
Q psy4866 231 IFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMG---RSNMKAFVFMAF 307 (537)
Q Consensus 231 ~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 307 (537)
+..+.++++|.... +..++.++++ ....+..+ . ...........++++.+ +....++.+...
T Consensus 334 ~~a~p~f~fPk~lp---~~~~~~~~~~-~~~~k~~~-~----------~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~ 398 (735)
T KOG3626|consen 334 FSAVPLFFFPKELP---KSQKRKRARD-LHVLKTES-G----------GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVV 398 (735)
T ss_pred HHHHHHHhCcccCc---cccccchhhh-hccccccc-c----------cccCCcchhhhHHHHHHHHHHHhcCchHHHHH
Confidence 87777788775531 1111100000 00000000 0 00000000112222222 222334456666
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhc-CCCC-Chh-HHHHHHHHHHHHHhhhHhhhhcccCC--cHHHHHhhHHHHH
Q psy4866 308 LAVFRAFTGVQSIIAYANTIFASS-ETFL-PSD-YISILFAIILLVSIFPSTYYIDRAGR--RVLFLVSSAGCSL 377 (537)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~ 377 (537)
+........+..+.+|+|.|++.. +.+. .+. +...+..-+..+|.+++|++..|+.- |....+..+...+
T Consensus 399 l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 399 LASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 666666667888999999999875 4331 222 23333444567888899999999854 3444333333333
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.72 E-value=3.8e-15 Score=141.03 Aligned_cols=384 Identities=14% Similarity=0.059 Sum_probs=231.7
Q ss_pred CCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh-hhhhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHhHhhhhh
Q psy4866 99 IPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR-IGRKWSLLMTGPITTASWIIAMYSR--SVLGLYVMRTLQGFSMAAIY 175 (537)
Q Consensus 99 ~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~ 175 (537)
+|+|+++..-+.++|..-.-+..+++|+++|| +|+|+++.+|.+++++|.++.+.+. +...++++-.+.++|.|..=
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 45999999999999998889999999999999 6999999999999999999999884 78899999999999999999
Q ss_pred hhhhhhhhccCCCcc--cchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHhhcccC--------
Q psy4866 176 VISPMYLGEISETSI--RGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVTFMFMPE-------- 241 (537)
Q Consensus 176 ~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~~~~~~e-------- 241 (537)
+....++.|.+|+++ |-..++++.++.++|.+++|++.++ .+|...|.+.++-..+.++.++..+.
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~ 215 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGV 215 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCC
Confidence 999999999997643 6778888999999999999888766 48999999888777666555444321
Q ss_pred -ChHHHHHhCCHHHHHHHHHhhcCC------ChhhHHHHHHHH--HHhh-----hhcccccchHHhhccchHHHHHHHHH
Q psy4866 242 -SPYFYAIKNQEGKAIESLKWLRNK------TADQVQSELQII--KQNT-----SKNVERTNFREFMGRSNMKAFVFMAF 307 (537)
Q Consensus 242 -sp~~l~~~~~~~~a~~~~~~~~~~------~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (537)
.|.-+..+.............-.. +.+......... .... .....+.. .+.-|-....++++...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~ 294 (498)
T COG3104 216 PDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAV 294 (498)
T ss_pred CCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHH
Confidence 111010010000000000000000 000000000000 0000 00000000 00000001111222222
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhc--CCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCc-------HHHHHhhHHHHHH
Q psy4866 308 LAVFRAFTGVQSIIAYANTIFASS--ETFLPSDYISILFAIILLVSIFPSTYYIDRAGRR-------VLFLVSSAGCSLF 378 (537)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-------~~~~~~~~~~~~~ 378 (537)
+....+-.+...+..|.....+.. |++.+..+..++..+.-++..++..++..|.+++ .-+-++..+++.+
T Consensus 295 iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~ 374 (498)
T COG3104 295 IFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLG 374 (498)
T ss_pred HHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHH
Confidence 222222223344555554444333 2334556677777777777777777776664332 2244566666666
Q ss_pred HHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHH
Q psy4866 379 SFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFF 458 (537)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 458 (537)
++++........ .+ .+..+...++...++........+|+..+++....|+...+..+++.......+..++..+.+
T Consensus 375 fl~l~~~~~~~~-~~--~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 375 FLILLLAGIWFG-GP--SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHHHhhc-CC--CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 666555422111 00 122334444455555555567788888899999999998888888888888777777777666
Q ss_pred H------HHHhhccchhhhHhhHHHHHHHHHHHh
Q psy4866 459 L------MDKHIGMYSNFLFGGVSSLVCTVYLYY 486 (537)
Q Consensus 459 ~------l~~~~g~~~~~~~~~~~~~~~~~~~~~ 486 (537)
. ..+.......|..++...++..+....
T Consensus 452 ~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 452 LTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred cccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 2 233334445666666666655554433
No 118
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.72 E-value=2.8e-16 Score=158.71 Aligned_cols=177 Identities=18% Similarity=0.085 Sum_probs=135.0
Q ss_pred hhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHH-H--HHHhhHHHHHH
Q psy4866 86 APVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWII-A--MYSRSVLGLYV 162 (537)
Q Consensus 86 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~-~--~~~~~~~~l~~ 162 (537)
...+|.+.++ ++|.+..+.++..+...++..++.++.|+++||+|||+++.++.++..++.+. . ..+++...+++
T Consensus 270 ~~~~p~~l~~--~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (490)
T PRK10642 270 LTYMPSYLSH--NLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFA 347 (490)
T ss_pred HHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 3455665532 67888888888888899999999999999999999999998887654443332 2 22345777888
Q ss_pred HHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHHHHHHhh
Q psy4866 163 MRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-----SYMNYLTYSLIIPIIFTVTFM 237 (537)
Q Consensus 163 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----~wr~~~~~~~~~~~~~~~~~~ 237 (537)
+|++.|++.+........++.|.+|++.|+.++++......++..++|.+.+++ +|+.++++..+++++.++..+
T Consensus 348 ~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 427 (490)
T PRK10642 348 GLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV 427 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 999999888777777888889999999999999974333444455666555442 477777777777777666777
Q ss_pred cccCChHHHHHh-----CCHHHHHHHHHhhcC
Q psy4866 238 FMPESPYFYAIK-----NQEGKAIESLKWLRN 264 (537)
Q Consensus 238 ~~~esp~~l~~~-----~~~~~a~~~~~~~~~ 264 (537)
++||+|+|+.++ +|.+||++.++++++
T Consensus 428 ~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 428 TMKETANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred HhccccCCCCCCccccccchhhHHHHhhcccc
Confidence 789999998865 999999999999874
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.67 E-value=4.4e-18 Score=169.96 Aligned_cols=382 Identities=11% Similarity=0.087 Sum_probs=3.0
Q ss_pred HHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHH
Q psy4866 69 VTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASW 148 (537)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~ 148 (537)
+..++..+...+..++....+..+.+ .|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.+++++|+
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiEr---RF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~ 82 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIER---RFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGS 82 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHH
Confidence 34455556667788888899999999 999999999999999999999999999999999888899999999999999
Q ss_pred HHHHHHh--------------------------------------------------hHHHHHHHHHHHHhHhhhhhhhh
Q psy4866 149 IIAMYSR--------------------------------------------------SVLGLYVMRTLQGFSMAAIYVIS 178 (537)
Q Consensus 149 ~~~~~~~--------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~ 178 (537)
+++++-+ -++.++++.++.|+|....++.+
T Consensus 83 ~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG 162 (539)
T PF03137_consen 83 LLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLG 162 (539)
T ss_dssp ---------------------------------------------------------------------SSS--------
T ss_pred HHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccce
Confidence 9987621 13567889999999999999999
Q ss_pred hhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh--------------------------hHHHHHHHHHHHHHHH
Q psy4866 179 PMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL--------------------------SYMNYLTYSLIIPIIF 232 (537)
Q Consensus 179 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~--------------------------~wr~~~~~~~~~~~~~ 232 (537)
.+|+-|.+++++-+.+.|+..+...+|.++|.++++.. .|+.-|++.+.+.++.
T Consensus 163 ~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ 242 (539)
T PF03137_consen 163 ITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLS 242 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998887542 2566666666666665
Q ss_pred HHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhc---cchHHHHHHHHHHH
Q psy4866 233 TVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMG---RSNMKAFVFMAFLA 309 (537)
Q Consensus 233 ~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 309 (537)
.+.++++|+.- ..+.+.++..+. +..+.. +... ++.++..........++++.+ +...++.++...+.
T Consensus 243 aipl~~FPk~l---p~~~~~~~~~~~-~~~~~~---~~~~--~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la 313 (539)
T PF03137_consen 243 AIPLFFFPKKL---PGTSERQEEKES-SERKEE---DSDK--DSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILA 313 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHcCCccC---CCcccccchhhh-hhcchh---hhhh--hcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHH
Confidence 56566666442 111110000000 000000 0000 000000000000112222222 33334445556666
Q ss_pred HHHHhhhHHHHHHHHHHHHHhc-CCC-CChh-HHHHHHHHHHHHHhhhHhhhhcccCC--cHHHHHhhHHHHHHHHHHH-
Q psy4866 310 VFRAFTGVQSIIAYANTIFASS-ETF-LPSD-YISILFAIILLVSIFPSTYYIDRAGR--RVLFLVSSAGCSLFSFIAG- 383 (537)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~~~~~~~- 383 (537)
..........+..|.|.|++.. +.+ ..+. +...+...+.++|.+++|++.+|++- |+.+....+...+..+.+.
T Consensus 314 ~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~ 393 (539)
T PF03137_consen 314 GVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSP 393 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666778899999999875 322 1222 33333444667899999999999853 4444433333333333211
Q ss_pred -HHHHhhh------cccc-------C-------------------------Cc-ccch-hhHHHHHHHHHHHhhccccch
Q psy4866 384 -LYYYVTI------ELQY-------E-------------------------IP-YTSW-VPFLSISLLGVFFNLGFGPLF 422 (537)
Q Consensus 384 -~~~~~~~------~~~~-------~-------------------------~~-~~~~-~~~~~~~~~~~~~~~~~~~~~ 422 (537)
++..-++ ..++ . .. .... ..++..++..+.......|..
T Consensus 394 ~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~ 473 (539)
T PF03137_consen 394 LFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPST 473 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchh
Confidence 1100000 0000 0 00 0111 222222233333334444443
Q ss_pred hhhccccCCccccchhhHHHHHHH-HHHHHHHHHHHHHHHHh
Q psy4866 423 TPLLSEYFSSNMKAVSCAVINILC-TTLGLISYKLFFLMDKH 463 (537)
Q Consensus 423 ~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~~~~~g~l~~~ 463 (537)
...-..+|+++|+.+.|+...+. -+|.+-+|.++|.+.|.
T Consensus 474 -~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 474 -LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------------
T ss_pred -eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 56668899999999999988665 55678889999999986
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.62 E-value=5.6e-13 Score=124.06 Aligned_cols=318 Identities=11% Similarity=0.058 Sum_probs=205.9
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhh-----hhHH-HHHHHHHHHHHHHHHHHH-----h-------hH--
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIG-----RKWS-LLMTGPITTASWIIAMYS-----R-------SV-- 157 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~-l~~~~~l~~~~~~~~~~~-----~-------~~-- 157 (537)
|+++...-.+.+.+...+... ..+.+|+.+|+.+ ||.. +..|.++...+..+..++ . +.
T Consensus 9 EL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~ 87 (403)
T PF03209_consen 9 ELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWL 87 (403)
T ss_pred HhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHH
Confidence 788888888888888876654 6889999999998 7755 445677766666655543 2 11
Q ss_pred H--HHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-----hHHHH--HHHHHHH
Q psy4866 158 L--GLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-----SYMNY--LTYSLII 228 (537)
Q Consensus 158 ~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----~wr~~--~~~~~~~ 228 (537)
+ ...+...+.|+|.+.......+++.|..|+++|+++.++......+|.+++.++.+.+ .-|.. +...+++
T Consensus 88 g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i 167 (403)
T PF03209_consen 88 GLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALI 167 (403)
T ss_pred HHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence 2 3445678899999999999999999999999999999999999999999998887663 12222 2222222
Q ss_pred HHHHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHH
Q psy4866 229 PIIFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFL 308 (537)
Q Consensus 229 ~~~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (537)
.++..++..+=.|.+. .+.. ..++.++...+..++++..++..+++++..++
T Consensus 168 ~~~l~~ia~wg~E~r~-------------------------~~~~---~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l 219 (403)
T PF03209_consen 168 ALLLNLIALWGQEPRR-------------------------SRRA---AAAERPRPPFREAWRQVWASPQARRFFVFLFL 219 (403)
T ss_pred HHHHHHHHHHhcccCC-------------------------cccc---cCCCCCCccHHHHHHHHHhCCChhHHHHHHHH
Confidence 2222222222222210 0000 00000011113444555555555554444443
Q ss_pred HHHHHhhhHHHHHHHHHHH-HHhc-----CCCC-ChhHHHHHHHHHHHHHhhhHhhhhc-ccCCcHHHHHhhHHHHHHHH
Q psy4866 309 AVFRAFTGVQSIIAYANTI-FASS-----ETFL-PSDYISILFAIILLVSIFPSTYYID-RAGRRVLFLVSSAGCSLFSF 380 (537)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~ 380 (537)
..+ .+++++. ++-+ +.+. +........+.+.+++....+++.. |.++++....++.+..+++.
T Consensus 220 ~t~---------a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~ 290 (403)
T PF03209_consen 220 GTL---------AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFA 290 (403)
T ss_pred HHH---------HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 333 2222322 2222 3332 3335666777888888888887765 67888888888888887777
Q ss_pred HHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHH
Q psy4866 381 IAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLM 460 (537)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 460 (537)
++..... ..+.+......++++++.+...... .+.+.+...+++.|..+|.....+.+...++..+.|.+
T Consensus 291 lii~a~~---------~~~~~~~~~~~~l~G~g~G~f~vga-ls~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 291 LIILAGP---------LGSPWLFRPGVFLLGLGNGLFTVGA-LSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred HHHHHHh---------cccchHHHHHHHHHHHhhhHHHHHH-HHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655432 2345666677777777766654443 36777888888899999999999999999999999988
Q ss_pred HHh
Q psy4866 461 DKH 463 (537)
Q Consensus 461 ~~~ 463 (537)
.|.
T Consensus 361 ~D~ 363 (403)
T PF03209_consen 361 RDL 363 (403)
T ss_pred HHH
Confidence 874
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.55 E-value=4.4e-14 Score=116.99 Aligned_cols=133 Identities=26% Similarity=0.324 Sum_probs=116.2
Q ss_pred HHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCC
Q psy4866 109 VVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISET 188 (537)
Q Consensus 109 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 188 (537)
+.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..++++++.+.+.+++.|++.+...+....++.|.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 34566788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHhHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHHHHh-hcccC
Q psy4866 189 SIRGTIGTLFQISCHLGILYTYVLGSEL----SYMNYLTYSLIIPIIFTVTF-MFMPE 241 (537)
Q Consensus 189 ~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~~~~~~~~~~~~~~~~-~~~~e 241 (537)
++|++..++......+|..+++.+.+.+ +|++.+++.++..++..+.. ++.||
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999998887663 79999998887776655444 34454
No 122
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.50 E-value=2.7e-13 Score=125.45 Aligned_cols=184 Identities=14% Similarity=0.191 Sum_probs=148.6
Q ss_pred cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHH
Q psy4866 296 RSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAG 374 (537)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 374 (537)
++.++..++..++.+...+..=-.+..-.|.+.++.+.+. +-+.+.+.+.+..-++.++.|.++||.+.|..+..++++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 3445555666665555544444556666677777776663 455788888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHH
Q psy4866 375 CSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISY 454 (537)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 454 (537)
+++..+++++. ++.+...+...+-+.+.+.++.|.. ..+..-+|+++||+..++-|...++|+++.|
T Consensus 104 sai~nil~Gfs------------~s~~~~~~l~~lng~fQg~Gwpp~~-~~i~~Wfsr~eRG~~~siWn~shNiGGal~~ 170 (448)
T COG2271 104 SAIVNILFGFS------------PSLFLFAVLWVLNGWFQGMGWPPCA-RTITHWFSRKERGTWWSIWNTSHNIGGALAP 170 (448)
T ss_pred HHHHHHHHhhh------------hHHHHHHHHHHHHHHHhcCCCcHHH-HHHHHHcCccccCceEEEehhhhhcccchHH
Confidence 99999999884 3445566666777888888887754 8889999999999999999999999999999
Q ss_pred HHH--HHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 455 KLF--FLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 455 ~~~--g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
.+. +.+..+.+|+..|++-++++++..+++++..+++.
T Consensus 171 ~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 171 LVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 999 89998889999999999999888888777766544
No 123
>KOG2816|consensus
Probab=99.49 E-value=2e-12 Score=126.14 Aligned_cols=352 Identities=16% Similarity=0.136 Sum_probs=206.4
Q ss_pred HHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCC-hhhHHHHHH----HHHHhhhhhhhHHhhhhhhhhHHHHHHHHHH
Q psy4866 70 TACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPN-EGSWVVAII----EIGNYLSPIPAGMLVNRIGRKWSLLMTGPIT 144 (537)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~s~~----~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~ 144 (537)
...+-.|..++......+..+.... .++.+.. ..+...... .+...+.++..|.++||+|||..+.+..+..
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~c---t~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~ 102 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLAC---TFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGT 102 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhc---ccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHH
Confidence 3344445555555555555555554 3332222 223333333 6778899999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhH--hhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----hH
Q psy4866 145 TASWIIAMYSRSVLGLYVMRTLQGFS--MAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL----SY 218 (537)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~w 218 (537)
.+..+...+.. +|.++ +.|+. .+..+....++++|....++|....++....+..+..++|.+++.. +.
T Consensus 103 ~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~ 177 (463)
T KOG2816|consen 103 ILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI 177 (463)
T ss_pred HHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc
Confidence 88877777765 44433 33332 2445677889999999999999999999998888888888888763 55
Q ss_pred HHHHHHHHHHHHHHH-HHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccc
Q psy4866 219 MNYLTYSLIIPIIFT-VTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRS 297 (537)
Q Consensus 219 r~~~~~~~~~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (537)
-..|.+..+..++.. ...+++||+-. ++.+.+ +. .+...... .........++...+..
T Consensus 178 a~~f~ia~~~~~~~~~y~~~~l~Esl~---~~~~~~-~~--~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 237 (463)
T KOG2816|consen 178 ALVFLIAAASGILSLLYMLLFLPESLQ---EKERSD-AT--LRELTPGS--------------LDSSHVADAFQSLTKVG 237 (463)
T ss_pred hHHHHHHHHHHHHHHHHHhhccccccC---cccccc-cc--ccccCCCc--------------ccchhhhhhhhhhcccC
Confidence 667888777776655 44567888731 011000 00 00000000 00000011111111111
Q ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-hcCCCC-ChhHHHHHHHHHHHHHhhhHh-hhhcccCCcHHHHHhhHH
Q psy4866 298 NMKAFVFMAFLAVFRAFTGVQSIIAYANTIFA-SSETFL-PSDYISILFAIILLVSIFPST-YYIDRAGRRVLFLVSSAG 374 (537)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~ 374 (537)
..+..+.......+....-.....-..+.++. ..+++. ..+......+....++.++.. .+...++.|+....|...
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLS 317 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHH
Confidence 11111111111111100000000000011111 113332 222455556677777777666 778888989988888888
Q ss_pred HHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHH
Q psy4866 375 CSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISY 454 (537)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 454 (537)
..+....+++.. ..|.......+.... ....|...+..+....++.+|.+.++...+..+...++|
T Consensus 318 ~~~~~~~~af~~------------~~w~~~~~~v~~~~~--~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~ 383 (463)
T KOG2816|consen 318 EFLQLLLFAFAT------------ETWMMFAAGVVVALA--GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSP 383 (463)
T ss_pred HHHHHHHHHHhc------------cchhhhHHHHHHHhh--cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhH
Confidence 888888777742 333333333322222 233455568888888999999999999999999999999
Q ss_pred HHHHHHHHh
Q psy4866 455 KLFFLMDKH 463 (537)
Q Consensus 455 ~~~g~l~~~ 463 (537)
.+.+.+...
T Consensus 384 ~~~~~i~~~ 392 (463)
T KOG2816|consen 384 ALYGNIFAL 392 (463)
T ss_pred HHHHHHHHH
Confidence 999988654
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.49 E-value=4.1e-13 Score=138.67 Aligned_cols=137 Identities=12% Similarity=0.111 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccC
Q psy4866 107 SWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEIS 186 (537)
Q Consensus 107 ~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 186 (537)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.++.++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45566777899999999999999999999999999999999999999998888889999999998889999999999999
Q ss_pred CCcccchhhhHhHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHHHHHHHhhcccCCh
Q psy4866 187 ETSIRGTIGTLFQISCHLGILYTYVLGSEL---SYMNYLTYSLIIPIIFTVTFMFMPESP 243 (537)
Q Consensus 187 ~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~---~wr~~~~~~~~~~~~~~~~~~~~~esp 243 (537)
|.++|++++++..+...+|.+++|++++.+ +...+|++.+++.++..++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999998653 345677777777777777777789873
No 125
>TIGR00895 2A0115 benzoate transport.
Probab=99.48 E-value=8.4e-13 Score=130.29 Aligned_cols=177 Identities=19% Similarity=0.143 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHH
Q psy4866 303 VFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 381 (537)
.....+..+...........+.|.+.++.+.+. ..+.......++.+++.++.|+++||+|||+.+..+.++..++.++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 98 (398)
T TIGR00895 19 IILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLL 98 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 333333333333334556667777777776653 3446667778888999999999999999999999888877777666
Q ss_pred HHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 382 AGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMD 461 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 461 (537)
+... .+.+..++..++.+.+.+. ..+...+++.|.+|++.|+++.++.+....+|..+++.+.+.+.
T Consensus 99 ~~~~------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 165 (398)
T TIGR00895 99 CALA------------TNVTQLLILRFLAGLGLGG-LMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLI 165 (398)
T ss_pred HHHc------------cchHHHHHHHHHHhccccc-chhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 5542 2333444444555554443 34556689999999999999999999999999999999999999
Q ss_pred HhhccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 462 KHIGMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 462 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
+..||+..+.+.+++.++..++.+.+.+++.
T Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 166 PVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9999998888877666666666656666653
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.46 E-value=6.8e-13 Score=131.70 Aligned_cols=144 Identities=19% Similarity=0.244 Sum_probs=121.1
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVI 177 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 177 (537)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++.+++++.+.+++.+++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 44667778899999999999999999999999999999999999999999889999999999999999999999888888
Q ss_pred hhhhhhccCCCcccchhhhH-hHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHH-hhcccC
Q psy4866 178 SPMYLGEISETSIRGTIGTL-FQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVT-FMFMPE 241 (537)
Q Consensus 178 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~-~~~~~e 241 (537)
...++.|.+|++.|+...+. ++....+|.++++.+.+. .||+..|.+.+++.++..+. .+.+++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88999999999988877655 566777888888777765 48999999888877664443 334443
No 127
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.45 E-value=1.1e-12 Score=129.59 Aligned_cols=140 Identities=14% Similarity=0.220 Sum_probs=117.4
Q ss_pred CChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHhHhhhhhhhh
Q psy4866 103 PNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR----SVLGLYVMRTLQGFSMAAIYVIS 178 (537)
Q Consensus 103 ~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~ 178 (537)
..+.+.+.++..++..++.++.|+++||+|||+++.++.++.+++..+..... +++.+++.+++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 36679999999999999999999999999999999999999988877666632 34667788999999999888998
Q ss_pred hhhhhccCCCcccchhhhHhH-HHHHHHHHHHHHHhhhh----------hHHHHHHHHHHHHHHHH-HHhhcccCC
Q psy4866 179 PMYLGEISETSIRGTIGTLFQ-ISCHLGILYTYVLGSEL----------SYMNYLTYSLIIPIIFT-VTFMFMPES 242 (537)
Q Consensus 179 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~i~~~l~~~~----------~wr~~~~~~~~~~~~~~-~~~~~~~es 242 (537)
..++.|++|+++|+++.++.+ ...++|.++||.+++.+ +|+..|.+.+++.++.. +..++++|+
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999997 66788998888888652 48999998888876654 444556665
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.45 E-value=3.3e-12 Score=125.49 Aligned_cols=152 Identities=11% Similarity=0.181 Sum_probs=123.4
Q ss_pred hhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy4866 87 PVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTL 166 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l 166 (537)
...|.+.++ +++.+..+.+++.+...++..++.+++|+++||+|||+.+..+.+...+......++++++.+++.+++
T Consensus 237 ~~~p~~l~~--~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIIN--ELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 345544432 789999999999888888888899999999999999998888777666665555667788888889999
Q ss_pred HHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHhhcccC
Q psy4866 167 QGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVTFMFMPE 241 (537)
Q Consensus 167 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~~~~~~e 241 (537)
.+++.+...+....+..|.+|+ +|++++++++....+|..+++.+++. ++|+..|++.+++.++.++..+++||
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9988888777778888999875 58999999888888888888877765 48999999888888887777776664
No 129
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.45 E-value=2.9e-11 Score=110.95 Aligned_cols=256 Identities=12% Similarity=0.107 Sum_probs=157.1
Q ss_pred chhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q psy4866 85 SAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMR 164 (537)
Q Consensus 85 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r 164 (537)
-+|.+-.+-+ ++|.+..|++.+....+....+...+.|.++||+|||+.-++-+++++++++ +-..++++.++++|
T Consensus 53 QGpY~Y~LY~---~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GR 128 (354)
T PF05631_consen 53 QGPYLYALYE---SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGR 128 (354)
T ss_pred hcchhHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHH
Confidence 3444444556 7899999999999999999999999999999999999999999999999886 45668999999999
Q ss_pred HHHHhHhhhhhhhhhhhh-hccC----CCcccchhhhHhH-HHHHHHHHHHHHHhhh----h--hHHHHHHHHHHHHHHH
Q psy4866 165 TLQGFSMAAIYVISPMYL-GEIS----ETSIRGTIGTLFQ-ISCHLGILYTYVLGSE----L--SYMNYLTYSLIIPIIF 232 (537)
Q Consensus 165 ~l~G~~~~~~~~~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~G~~i~~~l~~~----~--~wr~~~~~~~~~~~~~ 232 (537)
++.|++.+..+.+--++. .|.- |++..+..++... ...++-.+++.+++.. . +-..+|....++.++.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 999999999988887764 5542 2222233222222 1222223334444433 2 2366888877777665
Q ss_pred HHHh-hcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHH
Q psy4866 233 TVTF-MFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVF 311 (537)
Q Consensus 233 ~~~~-~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (537)
.++. ...+|.+. +. .+..+.... -+..++.+.+++ +.+.+.....+
T Consensus 209 ~~~I~~~W~ENyg------~~------------~~~~~~~~~------------~~~a~~~i~~d~---ril~LG~~qsl 255 (354)
T PF05631_consen 209 AVLILKTWPENYG------DT------------SSSSSLSGS------------FREAWRAILSDP---RILLLGLIQSL 255 (354)
T ss_pred HHHHHhcccccCC------Cc------------ccccchHHH------------HHHHHHHHHcCc---hhHHHHHHHHH
Confidence 5443 33455420 00 000000000 011223333322 23444555556
Q ss_pred HHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhc-ccCCcHHHHHhhHHHHHH
Q psy4866 312 RAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYID-RAGRRVLFLVSSAGCSLF 378 (537)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~ 378 (537)
.....+..+..|.|.+- ..+...+-+.++..+.+..++|+.+..++.. +......+.....+.+++
T Consensus 256 FE~smy~FVflWtPaL~-~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~~ 322 (354)
T PF05631_consen 256 FEGSMYLFVFLWTPALD-PDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAVS 322 (354)
T ss_pred HHHHHHHheeeeeceec-CCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 66665666677777764 2222235567778888888899988866544 433334443333333333
No 130
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.45 E-value=6.6e-11 Score=111.78 Aligned_cols=341 Identities=11% Similarity=0.133 Sum_probs=212.2
Q ss_pred CCCCCCChhh-HHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhh
Q psy4866 98 PIPMSPNEGS-WVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYV 176 (537)
Q Consensus 98 ~~~~s~~~~~-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 176 (537)
+.|++..|+. -+.-...-.+....++...+.|..|.|++++++.+...+..++..+.++...+-+..++-|++.+. ..
T Consensus 34 ~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-ev 112 (412)
T PF01770_consen 34 DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EV 112 (412)
T ss_pred ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HH
Confidence 3788888764 566666777888899999999999999999999999999999999999999999999999999766 57
Q ss_pred hhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhC
Q psy4866 177 ISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL------SYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKN 250 (537)
Q Consensus 177 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~------~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~ 250 (537)
+.++++--..|+++-.++.+...++.-+|..++.++|..+ +.+...++......+.++..+++|..++-+.-++
T Consensus 113 ay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r 192 (412)
T PF01770_consen 113 AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHR 192 (412)
T ss_pred HHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceec
Confidence 7889999999999999999999998888888888888763 5666767766666666666677776554222222
Q ss_pred CHHHHHHHHHhhcCCChhhHHHHHHHHHHhh--hhcccccchHHhhc---cchHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy4866 251 QEGKAIESLKWLRNKTADQVQSELQIIKQNT--SKNVERTNFREFMG---RSNMKAFVFMAFLAVFRAFTGVQSIIAYAN 325 (537)
Q Consensus 251 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (537)
+..+... ......++.++..++..+.++.. .....+..++.+.+ .-...+.++...++.....+++..+..|..
T Consensus 193 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ 271 (412)
T PF01770_consen 193 KPPAEQD-ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQ 271 (412)
T ss_pred cCccccc-cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHH
Confidence 1111000 00000000000000000000000 00000111111111 222233455566666666777888888888
Q ss_pred HHHHhcCCCC----ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhH--HHHHHHHHHHHHHHhhhccccCCccc
Q psy4866 326 TIFASSETFL----PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSA--GCSLFSFIAGLYYYVTIELQYEIPYT 399 (537)
Q Consensus 326 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (537)
.+.+...... -.+..-.+..+.+.++.+..|++..++.+...+.++.. +.+..++++.. ..+
T Consensus 272 ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~------------t~~ 339 (412)
T PF01770_consen 272 SLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSF------------TGN 339 (412)
T ss_pred HHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHH------------hhH
Confidence 8887772221 12344555666777788888888555555443333322 22333333322 235
Q ss_pred chhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHH
Q psy4866 400 SWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLIS 453 (537)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 453 (537)
.|......+++...+.+.. ++...-++.....+.-|..+|+.+++..+-..+.
T Consensus 340 Iwv~Y~~yIif~~~y~fli-TiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtil 392 (412)
T PF01770_consen 340 IWVCYAGYIIFRSLYMFLI-TIASFQIAKNLSEERYALVFGINTFVALVLQTIL 392 (412)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccccceeeeeeeHHHHHHHHHHhe
Confidence 6666677777777766544 3444555555566777888888877665554443
No 131
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.43 E-value=2.1e-12 Score=126.42 Aligned_cols=143 Identities=11% Similarity=0.076 Sum_probs=121.6
Q ss_pred hhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHH
Q psy4866 87 PVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSV--LGLYVMR 164 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~--~~l~~~r 164 (537)
...+.+.+ +++.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++..+.++. ..+++..
T Consensus 226 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (377)
T TIGR00890 226 GLYKPYGQ---SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATV 302 (377)
T ss_pred HHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHH
Confidence 34455666 788888899999999999999999999999999999999999999998888887776643 3345667
Q ss_pred HHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHH
Q psy4866 165 TLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIF 232 (537)
Q Consensus 165 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~ 232 (537)
++.|++.+...+....++.|.+|+++|+++.++......+|..++|.+.+. .+|++.|++.+++.++.
T Consensus 303 ~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 303 ALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 888998888888888899999999999999999999999999999988765 48999998888776654
No 132
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.43 E-value=2e-12 Score=127.23 Aligned_cols=351 Identities=15% Similarity=0.172 Sum_probs=200.0
Q ss_pred hhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhh---h--hhHHHHHHHHHHHHHHHHHHHHh----hH
Q psy4866 87 PVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRI---G--RKWSLLMTGPITTASWIIAMYSR----SV 157 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~---G--rr~~l~~~~~l~~~~~~~~~~~~----~~ 157 (537)
+..|.+.+ ++|+++++...+.+...+...+ -++.|.++|-+ | ||+.++++.++.+++.+..+..+ +.
T Consensus 11 ~~~~~l~~---~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 11 AIYPFLKD---DLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHH---HcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 44567777 9999999999998888887765 46778999985 3 66677778887766666555533 56
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhccCC--CcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHH
Q psy4866 158 LGLYVMRTLQGFSMAAIYVISPMYLGEISE--TSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPII 231 (537)
Q Consensus 158 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~ 231 (537)
....+.-++..+|.+....++-+++.|... ++.||...+.......+|.+++..+++. .+++..|.+.+++..+
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLL 166 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHH
Confidence 667777888899999999999999999873 3337788888888888888888877765 3788888888877776
Q ss_pred HHHHhhc-ccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHH-HHHHH
Q psy4866 232 FTVTFMF-MPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVF-MAFLA 309 (537)
Q Consensus 232 ~~~~~~~-~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 309 (537)
..+..++ .+|.+ .+..+ +. ....++. ....... .++.....++.++.+..+...+ ..++.
T Consensus 167 ~~~~~~~~~~e~~------~~~~~--~~-~~~~~~~---~~~~~~~------~~~~~~~l~~~~~~~~i~~~~~~~~~~~ 228 (433)
T PF03092_consen 167 MLIVALFLLEERK------VRPAD--EV-FSFGKEE---VPCLFGS------FREQLSELWRALQQRAIWQPILFFIFFF 228 (433)
T ss_pred HHHHHHHhhhhcc------ccccc--hh-hcccccc---cchhhHH------HHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 5544444 34311 00000 00 0000000 0000000 0000122233333322222222 11111
Q ss_pred HHHHhhhHHH-HHHHHHHHHHhcCCCCChh---HHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHH
Q psy4866 310 VFRAFTGVQS-IIAYANTIFASSETFLPSD---YISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLY 385 (537)
Q Consensus 310 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (537)
.+..... .. ..++...... |...+.. ....+..++.++|..+......+..-|+++....++..+..+.-...
T Consensus 229 ~~~~~~~-~a~~fy~~~~~~~--gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~l 305 (433)
T PF03092_consen 229 NLPPSIS-SASSFYFQTDALG--GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLL 305 (433)
T ss_pred HhccCCC-CccEEEEEecccc--ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEE
Confidence 1110000 01 1111111111 1111222 23344455556666666655555666666665555444333221111
Q ss_pred HHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4866 386 YYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG 465 (537)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 465 (537)
. .......+.++. +..+.-..+........+.|.. ..++|+.|+..-|+.+++...+.++|..++..+...+.+..|
T Consensus 306 v-~~~n~~~Gi~d~-~f~lgd~~l~~~~~~i~~mP~l-vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 306 V-TRWNLDLGIPDQ-WFALGDTILEEVIGMIAFMPSL-VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred E-EEEeeeeCcCCe-EEEEEhHHHHHHHHHHHHHHHH-HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 000000111122 3334444555555555566654 789999999999999999999999999999999988887765
No 133
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.43 E-value=3.2e-12 Score=127.22 Aligned_cols=172 Identities=19% Similarity=0.246 Sum_probs=127.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHH
Q psy4866 306 AFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGL 384 (537)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 384 (537)
..+..+..+.....+..+.|.+.++.+.+. +.+.......++..++.++.|++.||+|||+.+..+.++.+++.++...
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 107 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF 107 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 333333333333455677888888877763 3457777888899999999999999999999999998888888776655
Q ss_pred HHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4866 385 YYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI 464 (537)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 464 (537)
. .+.+...+..++.+.+.+... +....++.|.+|+++|++++++.+....+|..+++.+.+.+.+..
T Consensus 108 ~------------~~~~~l~~~~~l~g~~~g~~~-~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 108 S------------SSLWAFALLWVLNAFFQGWGW-PVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred H------------hHHHHHHHHHHHHHHHHHccc-hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3 223333333444455555444 445588899999999999999999999999999999999999999
Q ss_pred ccchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 465 GMYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 465 g~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
||++.|.+.+++.++..++..+++++
T Consensus 175 gw~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 175 GWRYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999988777666555544445554
No 134
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.42 E-value=9e-12 Score=122.96 Aligned_cols=150 Identities=10% Similarity=0.101 Sum_probs=123.7
Q ss_pred hhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy4866 87 PVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTL 166 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l 166 (537)
..+|.+.. +.+. .+.++..+.+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+.++.+.+++.+++
T Consensus 237 ~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (399)
T PRK05122 237 TFITLYYA---ARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAAL 311 (399)
T ss_pred HHHHHHHH---Hccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 34444445 4454 345677788889999999999999999999999999999888888888888888888899999
Q ss_pred HHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHhhcccC
Q psy4866 167 QGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVTFMFMPE 241 (537)
Q Consensus 167 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~~~~~~e 241 (537)
.|++.+...+.....+.|.+|+++|+++.++++....+|..+++.+.+. .+|++.|++.++..++..+..+++++
T Consensus 312 ~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 312 TGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999888888888899999999999999999998888887766655 38999999988887776655555543
No 135
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.41 E-value=7e-12 Score=124.08 Aligned_cols=149 Identities=18% Similarity=0.169 Sum_probs=125.4
Q ss_pred hHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy4866 88 VLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQ 167 (537)
Q Consensus 88 ~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~ 167 (537)
.+|.+.+ +.|.+..+.+++.+.+.++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+.-++.
T Consensus 242 ~~p~~~~---~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 242 WLPSLLV---GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHH---hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4577777 7899999999999999999999999999999999999999888777777777777777888888888899
Q ss_pred HhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 168 GFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-----SYMNYLTYSLIIPIIFTVTFMFM 239 (537)
Q Consensus 168 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----~wr~~~~~~~~~~~~~~~~~~~~ 239 (537)
|++.++..+...+++.|.+|+++|+++.++.+....+|..++|.+++.+ +|...++......++..+..+++
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888888999999999999999999999999999999999998774 45666666665555555444444
No 136
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.40 E-value=4.6e-12 Score=122.69 Aligned_cols=162 Identities=19% Similarity=0.283 Sum_probs=141.3
Q ss_pred hhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhH-HHHHHHHHHHHHHHHHHHH
Q psy4866 76 FTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKW-SLLMTGPITTASWIIAMYS 154 (537)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~l~~~~~~~~~~~ 154 (537)
+.............|.+.++ .++.+..+.+++.+...++..++.++.|++.||+|||+ .+..+.++..++.++..+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 262 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQE--VLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA 262 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 33344444555666777762 34889999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHH
Q psy4866 155 RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPI 230 (537)
Q Consensus 155 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~ 230 (537)
++.+.+.+..++.|++.+...+....++.|..|+++|++.+++......+|..+++.+.+. .+|+..+++.+++.+
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988876 389999999998888
Q ss_pred HHHHHhhcc
Q psy4866 231 IFTVTFMFM 239 (537)
Q Consensus 231 ~~~~~~~~~ 239 (537)
+..+..+++
T Consensus 343 i~~i~~~~~ 351 (352)
T cd06174 343 LAALLLLLL 351 (352)
T ss_pred HHHHHheec
Confidence 776655443
No 137
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.39 E-value=1.3e-11 Score=121.78 Aligned_cols=181 Identities=15% Similarity=0.082 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHH
Q psy4866 300 KAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLF 378 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 378 (537)
+..++..++.++........+....|.+.++.+.+. +.++......++..++.++.|++.||+|||+.+..+.++..++
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 86 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA 86 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH
Confidence 334444444544444445555566676666666653 3457777888899999999999999999999999998888888
Q ss_pred HHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHH
Q psy4866 379 SFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFF 458 (537)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 458 (537)
.++..+. .+.+..++.-++.+.+.+.. .+....++.|.+|+++|++++++.+....+|..+++.+.+
T Consensus 87 ~~~~~~~------------~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T TIGR02332 87 STATMFA------------TGPESLYLLRILVGIAEAGF-LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSG 153 (412)
T ss_pred HHHHHHh------------cCHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777653 23344445555556655543 3555578899999999999999999999999999999999
Q ss_pred HHHH------hhccchhhhHhhHHHHHHHHHHHhhccCCCC
Q psy4866 459 LMDK------HIGMYSNFLFGGVSSLVCTVYLYYFLLETKG 493 (537)
Q Consensus 459 ~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (537)
++.+ ..||++.|.+.++..++..++.++++||+++
T Consensus 154 ~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 154 YILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 8875 3589999998887777766666667777653
No 138
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.38 E-value=3.3e-11 Score=117.97 Aligned_cols=146 Identities=10% Similarity=0.051 Sum_probs=125.0
Q ss_pred chhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q psy4866 85 SAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMR 164 (537)
Q Consensus 85 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r 164 (537)
.....|.+.+ ++|.+..+.|++.+...++..++.+++|++.||+|+|+.+.++.++.++..++.+++++.+.+++.+
T Consensus 224 ~~~~~~~~l~---~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q 300 (382)
T TIGR00902 224 YYGFSAIYWQ---AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQ 300 (382)
T ss_pred HHHHHHHHHH---HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHH
Confidence 3445566677 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhH-HHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHHHH
Q psy4866 165 TLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQ-ISCHLGILYTYVLGSEL----SYMNYLTYSLIIPIIFTVT 235 (537)
Q Consensus 165 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~i~~~l~~~~----~wr~~~~~~~~~~~~~~~~ 235 (537)
+++|++.+...+....++.+. |+++|++..++++ ...++|..+++.+++.+ ++ ..|++.+.++++..++
T Consensus 301 ~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999998 9989999999875 46778888888887664 54 4566666666554433
No 139
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.37 E-value=6e-12 Score=124.09 Aligned_cols=162 Identities=17% Similarity=0.173 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCC
Q psy4866 318 QSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEI 396 (537)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (537)
..+....|.+.++.+.+. +.++......++..++.++.|++.||+|||+.+..+.++..++.+++.+.
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~----------- 79 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA----------- 79 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-----------
Confidence 344555566666666653 45577888899999999999999999999999998888888777766553
Q ss_pred cccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHH
Q psy4866 397 PYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVS 476 (537)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 476 (537)
.+.+..++..++.+.+.+.. .+....++.|.+|+++|++++++.+....+|..+++.+.+.+.+..+|+..|.+.+++
T Consensus 80 -~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 157 (399)
T TIGR00893 80 -GAYVSLYILRVLLGAAEAPF-FPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVL 157 (399)
T ss_pred -cCHHHHHHHHHHHHHHHHhh-hhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 23445555556666665544 4555689999999999999999999999999999999999999999999988888877
Q ss_pred HHHHHHHHHhhccCCC
Q psy4866 477 SLVCTVYLYYFLLETK 492 (537)
Q Consensus 477 ~~~~~~~~~~~~~~~~ 492 (537)
.++..++.+...++++
T Consensus 158 ~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 158 GIIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHHHHhhheecCCC
Confidence 7776666555555544
No 140
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.37 E-value=2.7e-11 Score=118.60 Aligned_cols=142 Identities=14% Similarity=0.238 Sum_probs=120.4
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVI 177 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 177 (537)
++|.++.+.+++.+...+...++.++.|++.||+|||+++.++.++..+..+...+.++.+.+.+.+++.|++.+...+.
T Consensus 229 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 308 (375)
T TIGR00899 229 ELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGI 308 (375)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999988888888888999999999999999998888777766666667788888888999999999988888
Q ss_pred hhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHhhccc
Q psy4866 178 SPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVTFMFMP 240 (537)
Q Consensus 178 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~~~~~~ 240 (537)
...++.|..|+ +++++.++++....+|..+++.+++. .+|+..|++.++..++..+...+++
T Consensus 309 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 309 GMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 88899998876 56799999998888999998888765 4899999998888877776666554
No 141
>PRK10054 putative transporter; Provisional
Probab=99.37 E-value=1.7e-11 Score=120.34 Aligned_cols=165 Identities=11% Similarity=0.089 Sum_probs=119.2
Q ss_pred HhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhh
Q psy4866 313 AFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTI 390 (537)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (537)
...+......+++.++++ .+.+. +.++......++.+++.++.|+++||+|||+.+..+.++..++.+.+.+.
T Consensus 19 ~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~----- 93 (395)
T PRK10054 19 LTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV----- 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH-----
Confidence 334456666777777754 46652 45566777778889999999999999999999988888777776665543
Q ss_pred ccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhh
Q psy4866 391 ELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNF 470 (537)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 470 (537)
++.+..++...+.+.... ...+....+..|..|+++|+++.|+.+...++|.+++|.+.+.+.+ .||+..|
T Consensus 94 -------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f 164 (395)
T PRK10054 94 -------NNVTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPF 164 (395)
T ss_pred -------hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHH
Confidence 123333333333343333 2345556888999999999999999999999999999999998875 6899888
Q ss_pred hHhhHHHHHHHHHHHhhccCC
Q psy4866 471 LFGGVSSLVCTVYLYYFLLET 491 (537)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~ 491 (537)
.+.+++.++..++..++.++.
T Consensus 165 ~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 165 WLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 888777777665554555443
No 142
>PRK03545 putative arabinose transporter; Provisional
Probab=99.37 E-value=3e-11 Score=118.77 Aligned_cols=159 Identities=14% Similarity=0.105 Sum_probs=120.7
Q ss_pred HHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcc
Q psy4866 320 IIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPY 398 (537)
Q Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (537)
.....|.+.++.+.+. +.++......++..++.+..|++.||+|||+.+..+..+..++.+...+. +
T Consensus 28 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------------~ 95 (390)
T PRK03545 28 PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA------------W 95 (390)
T ss_pred HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh------------c
Confidence 3344677777777653 34466667777888889999999999999999999988888887766553 2
Q ss_pred cchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHH
Q psy4866 399 TSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSL 478 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 478 (537)
+.+..++.-++.+.+.+. ..+...+++.+.+|+++|++++|+......+|..++|.+.+.+.+..||++.|++.+++++
T Consensus 96 ~~~~l~~~r~~~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~ 174 (390)
T PRK03545 96 NFTVLLISRIGIAFAHAI-FWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGAL 174 (390)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHH
Confidence 334444444444444433 3345557889999999999999999999999999999999999999999999999888877
Q ss_pred HHHHHHHhhccCC
Q psy4866 479 VCTVYLYYFLLET 491 (537)
Q Consensus 479 ~~~~~~~~~~~~~ 491 (537)
+..++.+...|+.
T Consensus 175 l~~~~~~~~~~~~ 187 (390)
T PRK03545 175 ITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHhCCCC
Confidence 7766655555543
No 143
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.36 E-value=1.3e-11 Score=121.17 Aligned_cols=164 Identities=13% Similarity=0.074 Sum_probs=124.4
Q ss_pred hHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhcccc
Q psy4866 316 GVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQY 394 (537)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (537)
+........|.+.++.+.+. +.+.......++..++.++.|++.||+|||+.+..+.++..++.+.....
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--------- 90 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS--------- 90 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH---------
Confidence 34455555677777777653 44577777888999999999999999999999999888888777766552
Q ss_pred CCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhh
Q psy4866 395 EIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGG 474 (537)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 474 (537)
++.+...+..++.+.+.+.. .+...+++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..||+..+.+.+
T Consensus 91 ---~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 166 (385)
T TIGR00710 91 ---NNIETLLVLRFVQAFGASAG-SVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLS 166 (385)
T ss_pred ---ccHHHHHHHHHHHHcchhHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 23334444444455444443 34455888999999999999999999999999999999999999899998888888
Q ss_pred HHHHHHHHHHHhhccCCC
Q psy4866 475 VSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~ 492 (537)
++.++..+..+...||++
T Consensus 167 ~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 167 LAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHhCCCCC
Confidence 777777666655566544
No 144
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.36 E-value=4e-11 Score=112.73 Aligned_cols=174 Identities=17% Similarity=0.123 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHH
Q psy4866 303 VFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 381 (537)
++...+..+......+...-.+|.+-++.+.+. .++...+.++.+..++.++...+.||+.||++++....++.++.++
T Consensus 15 l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l 94 (394)
T COG2814 15 LLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLL 94 (394)
T ss_pred HHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 333444444444446677778889888888874 4568889999999999999999999999999999999999999988
Q ss_pred HHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 382 AGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMD 461 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 461 (537)
.++. .+.+..++.=++.+...+. +.++..++..++.|+++|++++++.+....+...+|.++..++-
T Consensus 95 ~alA------------p~f~~Ll~aR~~~g~a~G~-f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 95 SALA------------PSFAVLLLARALAGLAHGV-FWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred HHHh------------ccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 8774 3455555555566666555 44566799999999999999999999999999999999999999
Q ss_pred HhhccchhhhHhhHHHHHHHHHHHhhcc
Q psy4866 462 KHIGMYSNFLFGGVSSLVCTVYLYYFLL 489 (537)
Q Consensus 462 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 489 (537)
|..||+.+|++.+++.++..+..+..+|
T Consensus 162 ~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 162 QLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999998888888
No 145
>PRK12382 putative transporter; Provisional
Probab=99.36 E-value=2e-11 Score=120.09 Aligned_cols=146 Identities=10% Similarity=0.068 Sum_probs=122.6
Q ss_pred hhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy4866 87 PVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTL 166 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l 166 (537)
...|.+.+ +.+.+ +.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++
T Consensus 237 ~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (392)
T PRK12382 237 TFVSLYFA---SKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHH---hcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 34445555 45554 35667778888889999999999999999999999999999988888888888888899999
Q ss_pred HHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHhh
Q psy4866 167 QGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVTFM 237 (537)
Q Consensus 167 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~~~ 237 (537)
.|++.+...+...+.+.|.+|+++|+++.++++....+|..+++.+.+. .+|+..|.+.+++.++..+..+
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 9999998888888888999999999999999999999999998887765 4899999998888777655444
No 146
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.35 E-value=8e-12 Score=124.90 Aligned_cols=148 Identities=14% Similarity=0.112 Sum_probs=121.3
Q ss_pred cchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh--hhhhHHHHH--HHHHHHHHHHHHHHHhhHHH
Q psy4866 84 WSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR--IGRKWSLLM--TGPITTASWIIAMYSRSVLG 159 (537)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr--~Grr~~l~~--~~~l~~~~~~~~~~~~~~~~ 159 (537)
.....+|.+.+ ++|.+..+.+++.++..++..++.++.|+++|| +++|+...+ +.++.+++.+++.++++++.
T Consensus 259 ~~~~~l~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~ 335 (455)
T TIGR00892 259 APIIFLVPYAK---DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTG 335 (455)
T ss_pred chHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 34445677777 789999999999999999999999999999998 334433333 34444555566677889999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHHHHH
Q psy4866 160 LYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-----SYMNYLTYSLIIPIIFTV 234 (537)
Q Consensus 160 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----~wr~~~~~~~~~~~~~~~ 234 (537)
+++.+++.|++.+...+...+++.|.+|++++++.+++++....+|.+++|.+++.+ +|++.|++.+++.++..+
T Consensus 336 ~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 336 LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999888753 599999988887665444
No 147
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=6.5e-11 Score=117.14 Aligned_cols=178 Identities=11% Similarity=0.052 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHH
Q psy4866 300 KAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLF 378 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 378 (537)
++.+....+..+.............|.+.++.+.+. +.+.......++..++.++.|+++||+|||+.+..+.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 344444445455444455666667777777777663 4557777888999999999999999999999999988888777
Q ss_pred HHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHH
Q psy4866 379 SFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFF 458 (537)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 458 (537)
.++..+. .+.+..++..++.+.+.+... +...+++.|.+|+++|+++.++.+....+|..+++.+.+
T Consensus 91 ~~~~~~~------------~~~~~l~~~~~l~G~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 157 (405)
T TIGR00891 91 TLACGFA------------PGYITMFIARLVIGIGMGGEY-GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYS 157 (405)
T ss_pred HHHHHHh------------ccHHHHHHHHHHHHhhhhhhh-HHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666542 233444455555555554433 445588899999999999999999999999999999999
Q ss_pred HHHHhhc--cchhhhHhhHHHHHHHHHHHhhccCC
Q psy4866 459 LMDKHIG--MYSNFLFGGVSSLVCTVYLYYFLLET 491 (537)
Q Consensus 459 ~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (537)
.+.+..+ |+..|.+.++..++. ++.....||+
T Consensus 158 ~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~ 191 (405)
T TIGR00891 158 LVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEA 191 (405)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCC
Confidence 9888766 777776654444333 3333444554
No 148
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.34 E-value=6.4e-11 Score=116.18 Aligned_cols=160 Identities=13% Similarity=0.089 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCc
Q psy4866 319 SIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIP 397 (537)
Q Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (537)
.....+|.+.++.+.+. +.+.......++..++.++.|++.||+|||+.+..+.++.+++.++....
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~------------ 105 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA------------ 105 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH------------
Confidence 33345677777777653 34566677888889999999999999999999999999988877666542
Q ss_pred ccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHH
Q psy4866 398 YTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSS 477 (537)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 477 (537)
.+.+..++.-++.+.+.+. ..+....++.|.+|+++|+.+.++.....++|..++|.+.+.+.+..||+..|++.+++.
T Consensus 106 ~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~ 184 (394)
T PRK10213 106 NSFSLLLIGRACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMG 184 (394)
T ss_pred ChHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 2344455555555666554 345566888999999999999999999999999999999999999999999998887766
Q ss_pred HHHHHHHHhhccCC
Q psy4866 478 LVCTVYLYYFLLET 491 (537)
Q Consensus 478 ~~~~~~~~~~~~~~ 491 (537)
+++.++.....|+.
T Consensus 185 ~~~~l~~~~~~p~~ 198 (394)
T PRK10213 185 VLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHCCCC
Confidence 66555444444543
No 149
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.32 E-value=1.9e-11 Score=121.13 Aligned_cols=132 Identities=18% Similarity=0.159 Sum_probs=115.5
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhcc
Q psy4866 106 GSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEI 185 (537)
Q Consensus 106 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 185 (537)
.+.+.+++.++..++.++.|+++||+|||+.+..+.++..++.+...+.++.+.+++.+++.|++.+...+...+++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 46667777888889999999999999999999999888888888888888888899999999999999999999999999
Q ss_pred CCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHhh
Q psy4866 186 SETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVTFM 237 (537)
Q Consensus 186 ~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~~~ 237 (537)
.|+++||+.+++......+|..++|.+++. .+|+..|++.+++.++..+..+
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888876 3899999999888777655444
No 150
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.31 E-value=5.2e-11 Score=120.56 Aligned_cols=177 Identities=14% Similarity=0.058 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHH
Q psy4866 303 VFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 381 (537)
+....+..+....-...+..-+|.+.++.+.+. +..+....+.++..++.++.|+++||+|||+.+..+.++..++.++
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~ 87 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLA 87 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 344444444444445667777888888776653 4557777788888889999999999999999999999998888877
Q ss_pred HHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccC-CccccchhhHHHHHHHHHHHHHHHHHHHHH
Q psy4866 382 AGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYF-SSNMKAVSCAVINILCTTLGLISYKLFFLM 460 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 460 (537)
.+.. .+.+..++.-.+.+.+.+.. .+.....+.+.+ |+++|++++|+......+|..++|.+.+.+
T Consensus 88 ~~~a------------~~~~~li~~r~l~G~g~~~~-~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l 154 (495)
T PRK14995 88 AAFS------------PTASWLIATRALLAIGAAMI-VPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGIL 154 (495)
T ss_pred HHHc------------CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7653 33444444445556555443 333334555554 678999999999999999999999999999
Q ss_pred HHhhccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 461 DKHIGMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 461 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
.++.||++.|++...++++..++..++.|+.+
T Consensus 155 ~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 155 LEHFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999888777777766666666543
No 151
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.31 E-value=3.7e-11 Score=118.21 Aligned_cols=176 Identities=15% Similarity=0.101 Sum_probs=128.4
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 304 FMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
.+.....+....+.......+|.+.++.+.+. ..+.......++..++.++.|+++||+|||+.+..+.++..++.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 33444444444455566677888888777653 33356667778889999999999999999999998888877777665
Q ss_pred HHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 383 GLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK 462 (537)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 462 (537)
... ++.+..++..++.+.+.+.. .+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+
T Consensus 86 ~~~------------~~~~~~~~~~~l~g~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~ 152 (392)
T PRK10473 86 SLA------------ETSSLFLAGRFLQGIGAGCC-YVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML 152 (392)
T ss_pred HHh------------CcHHHHHHHHHHHHhhhhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 542 22233333444444444332 33456888999999999999999999999999999999998888
Q ss_pred hhccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 463 HIGMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 463 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
..||+..+.+.+++.++..++.+.+.+|++
T Consensus 153 ~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 153 KFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred CcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 889998888888877777776666666654
No 152
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.30 E-value=4.2e-11 Score=117.99 Aligned_cols=145 Identities=15% Similarity=0.146 Sum_probs=110.3
Q ss_pred cchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHH--HHHHHH--hhHHH
Q psy4866 84 WSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASW--IIAMYS--RSVLG 159 (537)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~--~~~~~~--~~~~~ 159 (537)
.....+|.+.++ +++.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. ++..+. ++.+.
T Consensus 237 ~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (394)
T TIGR00883 237 LITTYLPTYLTQ--TLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTL 314 (394)
T ss_pred HHHHHHHHHHHH--hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 344556666532 788999999999999999999999999999999999998776554444333 222222 46677
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhH-hHHHHHHHHHHHHHHhhhh----h-HHHHHHHHHHHHH
Q psy4866 160 LYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTL-FQISCHLGILYTYVLGSEL----S-YMNYLTYSLIIPI 230 (537)
Q Consensus 160 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~i~~~l~~~~----~-wr~~~~~~~~~~~ 230 (537)
+++..++.|++.+...+...+++.|.+|+++|+++.++ ...+..+|..++|.+++.+ + |+..++..+...+
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 315 FFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 77888999999989999999999999999999999987 4556667877887777653 5 7777666555443
No 153
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.30 E-value=9.1e-11 Score=114.89 Aligned_cols=146 Identities=16% Similarity=0.146 Sum_probs=118.3
Q ss_pred hhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy4866 87 PVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTL 166 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l 166 (537)
..+|.+.+ +.|.+..+.+++.+.+.++..+++++.|++.||+|+|+++..+.++..++.+... . ........++
T Consensus 221 ~~lp~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l 294 (381)
T PRK03633 221 GLMPLYLN---HQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFI 294 (381)
T ss_pred HHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHH
Confidence 34677777 7788999999999999999999999999999999999999988888777665443 2 2334457788
Q ss_pred HHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHHHHhhc
Q psy4866 167 QGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL----SYMNYLTYSLIIPIIFTVTFMF 238 (537)
Q Consensus 167 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~~~~~~~~~~~~~~~~~~ 238 (537)
.|++.....|...+++.|..|+++++.+.+.+..+.++|..++|.+++.+ +|++.|.+.+.+.++..+..+.
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 88887888899999999999888888888888888899999998888764 7899999888777665554443
No 154
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.30 E-value=2.7e-11 Score=123.00 Aligned_cols=170 Identities=16% Similarity=0.140 Sum_probs=130.6
Q ss_pred HHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHh
Q psy4866 310 VFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYV 388 (537)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (537)
.+.............|.+.++.+.+. +.++......++.+++.++.|++.||+|||+.+..+.++..++.++....
T Consensus 11 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--- 87 (485)
T TIGR00711 11 TFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA--- 87 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc---
Confidence 33333345566677888888877653 45577888899999999999999999999999999988888877766542
Q ss_pred hhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q psy4866 389 TIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYS 468 (537)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 468 (537)
.+.+..++..++.+.+.+. ..+...+++.|.+|+++|+++.++......+|..++|.+.+++.++.||++
T Consensus 88 ---------~~~~~l~~~~~~~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~ 157 (485)
T TIGR00711 88 ---------PNLELMIIFRVIQGFGGGP-LIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRW 157 (485)
T ss_pred ---------CCHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCcee
Confidence 2334444444455554443 345566899999999999999999999999999999999999999999999
Q ss_pred hhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 469 NFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
.|++.+.+.++..++..++.++++
T Consensus 158 ~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 158 IFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhhhhHHHHHHHHHHHHHcCCcc
Confidence 998887777777666656666543
No 155
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.29 E-value=9.5e-11 Score=117.37 Aligned_cols=162 Identities=13% Similarity=0.135 Sum_probs=110.6
Q ss_pred HHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcc
Q psy4866 320 IIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPY 398 (537)
Q Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (537)
+....|.+.++ +.+. +.+.......++..++.++.|+++||+|+|+.+..+.++.+++.+++.+.... ..
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~--------~~ 118 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA--------TS 118 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc--------cc
Confidence 44556665554 6552 44467777889999999999999999999999999988888877766553100 01
Q ss_pred cchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHH-HHHHHHHHHHhhccchhhhHhhHHH
Q psy4866 399 TSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLI-SYKLFFLMDKHIGMYSNFLFGGVSS 477 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~~~~~g~l~~~~g~~~~~~~~~~~~ 477 (537)
+.+..++...+.+.+.+... +.....+.+.+|+++|++++|+.+....+|+.+ +|.+...+....||+..|++.+++.
T Consensus 119 ~~~~~~~~~~l~gi~~g~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~ 197 (452)
T PRK11273 119 SIAVMFVLLFLCGWFQGMGW-PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAA 197 (452)
T ss_pred cHHHHHHHHHHHHHHHhccc-hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 22233444445555555444 333467788899999999999999999888754 4443333333448888888887777
Q ss_pred HHHHHHHHhhccCC
Q psy4866 478 LVCTVYLYYFLLET 491 (537)
Q Consensus 478 ~~~~~~~~~~~~~~ 491 (537)
++..++..++.+++
T Consensus 198 ~~~~~l~~~~~~~~ 211 (452)
T PRK11273 198 ILVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHHHHccCC
Confidence 77666665666654
No 156
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.29 E-value=1.5e-11 Score=120.44 Aligned_cols=163 Identities=15% Similarity=0.212 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
...+....|.+.++.+.+. +.+....+..++..++.++.|+++||+|||+.+..+.++..++.+++.+.
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------- 80 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS---------- 80 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh----------
Confidence 3445555677666666653 45577788889999999999999999999999999988888887776653
Q ss_pred CcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHH-HHHHHHHHhhccchhhhHhh
Q psy4866 396 IPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISY-KLFFLMDKHIGMYSNFLFGG 474 (537)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~-~~~g~l~~~~g~~~~~~~~~ 474 (537)
.+.+..++..++.+.+.+.. .+...+++.|.+|+++|+++.++.+....+|..+++ .+.+.+.+..+|+..|.+.+
T Consensus 81 --~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (379)
T TIGR00881 81 --TSLWVMAALWALNGIFQGMG-WPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPG 157 (379)
T ss_pred --hhHHHHHHHHHHHHhhcccc-CCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHH
Confidence 23344444555555554443 455668999999999999999999999999999999 46666667778988888877
Q ss_pred HHHHHHHHHHHhhccCCC
Q psy4866 475 VSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~ 492 (537)
++.++..++.+.+.++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 158 IIAIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHHHheeeCCCc
Confidence 777766666655555543
No 157
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.29 E-value=1.4e-10 Score=114.38 Aligned_cols=159 Identities=11% Similarity=0.117 Sum_probs=113.9
Q ss_pred hhhHHHHHHHHHHHHHhc-CCCC-ChhHHHHHHHHHHHHHhhhHhhhhccc-CCcHHHHHhhHHHHHHHHHHHHHHHhhh
Q psy4866 314 FTGVQSIIAYANTIFASS-ETFL-PSDYISILFAIILLVSIFPSTYYIDRA-GRRVLFLVSSAGCSLFSFIAGLYYYVTI 390 (537)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (537)
...++.+..++|.++.+. +.+. ++......+.....++.+++|+++||+ |||+.+..+.++..++.+++...
T Consensus 22 ~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~----- 96 (493)
T PRK15462 22 YFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS----- 96 (493)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh-----
Confidence 334667778888887664 5542 344566667778888999999999999 99999999998888887655431
Q ss_pred ccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCcc--ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q psy4866 391 ELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSN--MKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYS 468 (537)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 468 (537)
........+.+.+...+.+. ..+...+++.|.+|++ .|.++.++.+...++|++++|.+.+++.+..||+.
T Consensus 97 ------~~~~~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~ 169 (493)
T PRK15462 97 ------EIHPSFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAM 169 (493)
T ss_pred ------hcchhHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHH
Confidence 01112222222333333333 2344458899999876 69999999999999999999999999999999999
Q ss_pred hhhHhhHHHHHHHHHH
Q psy4866 469 NFLFGGVSSLVCTVYL 484 (537)
Q Consensus 469 ~~~~~~~~~~~~~~~~ 484 (537)
.|.+.++..+++.+..
T Consensus 170 ~F~iaaigm~l~li~~ 185 (493)
T PRK15462 170 GFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888766555544443
No 158
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.28 E-value=1.4e-10 Score=117.59 Aligned_cols=154 Identities=13% Similarity=0.022 Sum_probs=114.5
Q ss_pred hhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh--hH-H-HHH
Q psy4866 86 APVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR--SV-L-GLY 161 (537)
Q Consensus 86 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~-~-~l~ 161 (537)
....|.+.+ +.|.+....++......++..++.++.|+++||+|||++++.+.++.+++.++.+... +. + ...
T Consensus 291 ~~~~p~i~~---~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 291 LYYAPEIFK---TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred HHHHHHHHH---HcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 344577777 7888887778888888889999999999999999999999999999988887766432 21 1 222
Q ss_pred HHHHHHHhHhhhh-hhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhh----------hhhHHHHHHHHHHHHH
Q psy4866 162 VMRTLQGFSMAAI-YVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGS----------ELSYMNYLTYSLIIPI 230 (537)
Q Consensus 162 ~~r~l~G~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~----------~~~wr~~~~~~~~~~~ 230 (537)
.+-++.+++.+.. .+....++.|.+|+++|+.++++......+|.++++.+.. .++|++.|++.+++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHH
Confidence 3344444444432 3667899999999999999999999988888887754433 3467888888887766
Q ss_pred HHHHH-hhcccCC
Q psy4866 231 IFTVT-FMFMPES 242 (537)
Q Consensus 231 ~~~~~-~~~~~es 242 (537)
+..+. +++.||+
T Consensus 448 ~~~~~~~~~~~e~ 460 (479)
T PRK10077 448 LAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHhccccC
Confidence 65544 4456776
No 159
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.28 E-value=9.1e-11 Score=118.03 Aligned_cols=152 Identities=11% Similarity=0.015 Sum_probs=109.4
Q ss_pred chhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHH--HHHhhHHHHHH
Q psy4866 85 SAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIA--MYSRSVLGLYV 162 (537)
Q Consensus 85 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~--~~~~~~~~l~~ 162 (537)
....+|.+.++ ++|+|..+.++..+.+.++..++.+++|+++||+|||+.+.....+..++..+. ...++.+.+.+
T Consensus 277 ~~~~~p~yl~~--~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (467)
T PRK09556 277 IDNWSPVYAFQ--ELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLA 354 (467)
T ss_pred HHHHHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 34445654431 789999999999999999999999999999999999987766554444433222 23346666778
Q ss_pred HHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHH-HHHHHHHHhhh----------------hhHHHHHHHH
Q psy4866 163 MRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHL-GILYTYVLGSE----------------LSYMNYLTYS 225 (537)
Q Consensus 163 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~i~~~l~~~----------------~~wr~~~~~~ 225 (537)
.+++.|++.............|.+|+++||.+.++.+....+ |..++|.+.+. .+|+..|++.
T Consensus 355 ~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~ 434 (467)
T PRK09556 355 SLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAAL 434 (467)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHH
Confidence 888888654444333445677999999999999999888776 65666555433 2489999888
Q ss_pred HHHHHHHHHHhhc
Q psy4866 226 LIIPIIFTVTFMF 238 (537)
Q Consensus 226 ~~~~~~~~~~~~~ 238 (537)
++..++..+..++
T Consensus 435 ~~~~~~~~~~~~~ 447 (467)
T PRK09556 435 DIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHHHHHH
Confidence 7776665554443
No 160
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.28 E-value=1e-10 Score=114.52 Aligned_cols=163 Identities=12% Similarity=0.104 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
.......+|.+.++.+.+. ..++......++..++.++.|++.||+|||+.+..+..+.+++.++..+.
T Consensus 19 ~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~---------- 88 (382)
T PRK10091 19 EFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS---------- 88 (382)
T ss_pred HHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh----------
Confidence 3455556777777777653 44577788899999999999999999999999999998888887766552
Q ss_pred CcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhH
Q psy4866 396 IPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGV 475 (537)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 475 (537)
++.+..++.-++.+.+.+... +....+..|.+|+++|+.++++......++..++|.+.+.+.+..||++.|.+.++
T Consensus 89 --~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~ 165 (382)
T PRK10091 89 --SSYLMLAIGRLVSGFPHGAFF-GVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAV 165 (382)
T ss_pred --CcHHHHHHHHHHHHhhhHHHH-HHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHH
Confidence 334444555555555544433 34446778889998999999999999999999999999999998899999998888
Q ss_pred HHHHHHHHHHhhccCCC
Q psy4866 476 SSLVCTVYLYYFLLETK 492 (537)
Q Consensus 476 ~~~~~~~~~~~~~~~~~ 492 (537)
+.++..+..+...|+.+
T Consensus 166 ~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 166 FNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHhCCCCC
Confidence 77766665555566643
No 161
>PRK10504 putative transporter; Provisional
Probab=99.27 E-value=1.3e-10 Score=117.27 Aligned_cols=170 Identities=14% Similarity=0.057 Sum_probs=126.3
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHH
Q psy4866 308 LAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYY 386 (537)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (537)
+..+........+..+.|.+.++.+.+. +.++......++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 17 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~- 95 (471)
T PRK10504 17 FGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS- 95 (471)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh-
Confidence 3334444445566778899988877763 33456666778888999999999999999999988877777766554431
Q ss_pred HhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 387 YVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGM 466 (537)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 466 (537)
.+.+..++..++.+.+.+.. .+...+++.|.+|+++|+++.|+.+...++|..++|.+.|.+.+..||
T Consensus 96 -----------~~~~~l~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw 163 (471)
T PRK10504 96 -----------GTLNELLLARVLQGVGGAMM-VPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASW 163 (471)
T ss_pred -----------CCHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccH
Confidence 23334444555555555443 445567889999999999999999999999999999999999999999
Q ss_pred chhhhHhhHHHHHHHHHHHhhccC
Q psy4866 467 YSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
++.|.+...+..++.+......++
T Consensus 164 ~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 164 HWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999988877777666665555444
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=7.7e-11 Score=117.57 Aligned_cols=162 Identities=13% Similarity=0.144 Sum_probs=113.2
Q ss_pred HHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcc
Q psy4866 320 IIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPY 398 (537)
Q Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (537)
+....|.+.+ .+.+. +.++......++..++.++.|+++||+|||+.+..+.++.+++.+++...... ..
T Consensus 46 ~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 116 (438)
T TIGR00712 46 FALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA--------TS 116 (438)
T ss_pred HHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc--------cc
Confidence 3444555544 45553 34577778889999999999999999999999888887777776665432100 01
Q ss_pred cchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH-hhccchhhhHhhHHH
Q psy4866 399 TSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK-HIGMYSNFLFGGVSS 477 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~-~~g~~~~~~~~~~~~ 477 (537)
+.+...+..++.+.+.+..+. .....+.|.+|+++|++++|+.+....+++.+++.+.+...+ ..||+..|++.++++
T Consensus 117 ~~~~l~~~~~l~g~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~ 195 (438)
T TIGR00712 117 SIAIMFVLLFLNGWFQGMGWP-PCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICA 195 (438)
T ss_pred hHHHHHHHHHHHHHHhhcchH-HHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 122223333444555444443 344777899999999999999999999999999888776554 468999898888887
Q ss_pred HHHHHHHHhhccCC
Q psy4866 478 LVCTVYLYYFLLET 491 (537)
Q Consensus 478 ~~~~~~~~~~~~~~ 491 (537)
++..++.+++.+|+
T Consensus 196 ~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 196 IIVALFAFAMMRDT 209 (438)
T ss_pred HHHHHHHHHhccCC
Confidence 77766666666554
No 163
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.26 E-value=9.7e-11 Score=114.08 Aligned_cols=160 Identities=8% Similarity=0.055 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
.......+|.+..+.+.+. ..+.......++.+++.++.|+++||+|||+.+..+.++..++.+++.......
T Consensus 15 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~------ 88 (365)
T TIGR00900 15 TAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG------ 88 (365)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC------
Confidence 3344455566666655542 345677778889999999999999999999999988887777766655532111
Q ss_pred CcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhH
Q psy4866 396 IPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGV 475 (537)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 475 (537)
..+.+..++...+.+.+.+.. .+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..+++.++
T Consensus 89 -~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~ 166 (365)
T TIGR00900 89 -GLNIWQVYVLAGILAIAQAFF-TPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAV 166 (365)
T ss_pred -CCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 013344445555555555443 455568999999999999999999999999999999999999999999988887766
Q ss_pred HHHHHHHHH
Q psy4866 476 SSLVCTVYL 484 (537)
Q Consensus 476 ~~~~~~~~~ 484 (537)
..+++.++.
T Consensus 167 ~~~~~~~~~ 175 (365)
T TIGR00900 167 GFAISALLI 175 (365)
T ss_pred HHHHHHHHH
Confidence 666555444
No 164
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.26 E-value=2e-10 Score=113.39 Aligned_cols=155 Identities=13% Similarity=0.007 Sum_probs=115.7
Q ss_pred HHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhh
Q psy4866 325 NTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVP 403 (537)
Q Consensus 325 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (537)
|.+.++.+.+. .......++.++..++.++.|+++||+|||+.+..+..+..++.++.... .+.+..
T Consensus 40 ~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------------~~~~~l 107 (413)
T PRK15403 40 INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT------------TSMTQF 107 (413)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc------------CCHHHH
Confidence 44445555542 33466677788899999999999999999999999888877777666542 233344
Q ss_pred HHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHH
Q psy4866 404 FLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 483 (537)
++.-++.+.+.+. ..+....+..|.+|++++++++++.+....++..++|.+.+.+.+..||++.|++.+++.++..+.
T Consensus 108 ~~~r~l~Gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 108 LIARFIQGTSICF-IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 4444555554432 234455778899999999999999999999999999999999998889999999888887777666
Q ss_pred HHhhccCCC
Q psy4866 484 LYYFLLETK 492 (537)
Q Consensus 484 ~~~~~~~~~ 492 (537)
.++..||++
T Consensus 187 ~~~~lp~~~ 195 (413)
T PRK15403 187 LLLAMPETV 195 (413)
T ss_pred HHHhCCCCc
Confidence 555667654
No 165
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.26 E-value=4.1e-10 Score=113.26 Aligned_cols=159 Identities=11% Similarity=-0.029 Sum_probs=110.8
Q ss_pred hHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhcccc
Q psy4866 316 GVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQY 394 (537)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (537)
.......+.|.+.++.+.+. +.+.......++..++.++.|+++||+|||+.+..+.++.+++.++..+.
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--------- 121 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV--------- 121 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh---------
Confidence 34455566677777777753 33355666778888999999999999999999988887777776655542
Q ss_pred CCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH---------hhc
Q psy4866 395 EIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK---------HIG 465 (537)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~---------~~g 465 (537)
.+.+..++..++.+.+.+. ..+ ...++.|.+|+++||+++|+.+...++|..+++.+.+.+.. ..|
T Consensus 122 ---~s~~~l~~~r~l~G~~~~~-~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~g 196 (476)
T PLN00028 122 ---SSATGFIAVRFFIGFSLAT-FVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTA 196 (476)
T ss_pred ---cCHHHHHHHHHHHHHHHHh-hHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Confidence 2233333333444444432 333 33567899999999999999998888888887776655432 147
Q ss_pred cchhhhHhhHHHHHHHHHHHhhc
Q psy4866 466 MYSNFLFGGVSSLVCTVYLYYFL 488 (537)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~ 488 (537)
|++.|.+.+++.++..++.+++.
T Consensus 197 Wr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 197 WRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999988888877666654443
No 166
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.25 E-value=3.8e-10 Score=111.29 Aligned_cols=149 Identities=11% Similarity=0.119 Sum_probs=114.5
Q ss_pred hhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHH-HHHHHHHHHHHHHHH-----HhhHHH
Q psy4866 86 APVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLL-MTGPITTASWIIAMY-----SRSVLG 159 (537)
Q Consensus 86 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~l~~~~~~~~~~-----~~~~~~ 159 (537)
....|.+.+ ++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+...+ .++++.
T Consensus 242 ~~~~p~~~~---~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 318 (402)
T TIGR00897 242 AVFLPMFVA---ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAV 318 (402)
T ss_pred HHHHHHHHH---HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHH
Confidence 445677777 88999999999999999999999999999999999888764 333334443333332 235677
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHH
Q psy4866 160 LYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVT 235 (537)
Q Consensus 160 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~ 235 (537)
+++..++.|++.+...+. ...+.|..| ++|+++.++.+....+|..++|.+++. .||+..+++.+++.++..+.
T Consensus 319 ~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 319 ALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFL 396 (402)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 778889999988876553 456677654 589999999999999999999988765 48899999988887776665
Q ss_pred hhcc
Q psy4866 236 FMFM 239 (537)
Q Consensus 236 ~~~~ 239 (537)
.+++
T Consensus 397 ~~~~ 400 (402)
T TIGR00897 397 TAFI 400 (402)
T ss_pred HHHh
Confidence 5554
No 167
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.25 E-value=1.9e-10 Score=114.14 Aligned_cols=155 Identities=13% Similarity=0.061 Sum_probs=127.1
Q ss_pred hhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy4866 86 APVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRT 165 (537)
Q Consensus 86 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~ 165 (537)
...+|.+.++ .+|.+..+.|++.+.+.++..++.++.|++.||.++++.+..+.++.+++.++..+.++.+.+.++.+
T Consensus 243 ~~~~p~~~~~--~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADE--VWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHh--ccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3445666661 38999999999999999999999999999999988888888888888888888888888888888999
Q ss_pred HHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHH-HHHHhhccc
Q psy4866 166 LQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPII-FTVTFMFMP 240 (537)
Q Consensus 166 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~-~~~~~~~~~ 240 (537)
+.|++.+...+...+++.|..|++.|+++++++.....+|..+++.+.+. ++++..+++.+...++ ..+....+|
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999888888888899999999999999999988888888888877765 3667777766665544 445555566
Q ss_pred CC
Q psy4866 241 ES 242 (537)
Q Consensus 241 es 242 (537)
|.
T Consensus 401 ~~ 402 (417)
T PRK10489 401 EL 402 (417)
T ss_pred cc
Confidence 54
No 168
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.25 E-value=1.1e-10 Score=113.11 Aligned_cols=161 Identities=17% Similarity=0.199 Sum_probs=121.2
Q ss_pred HHHHHHHHH-HHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhcccc
Q psy4866 317 VQSIIAYAN-TIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQY 394 (537)
Q Consensus 317 ~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (537)
........| .+.++.+.+. +.++......++..++.++.|+++||+|||+.+..+.++.+++.++..+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--------- 82 (352)
T PF07690_consen 12 FSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--------- 82 (352)
T ss_dssp HHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh---------
Confidence 444555556 4545556553 45577788889999999999999999999999999988888884444431
Q ss_pred CCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhh
Q psy4866 395 EIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGG 474 (537)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 474 (537)
.+.+..++..++.+.+.+. ..+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..||+..+++.+
T Consensus 83 ---~~~~~~~~~~~l~g~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~ 158 (352)
T PF07690_consen 83 ---SNFWLLLIARFLLGIGSGF-FSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISA 158 (352)
T ss_dssp ---CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHH
T ss_pred ---hhHHHHhhhcccccccccc-ccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccccccc
Confidence 2334455555556666544 445566899999999999999999999999999999999999998889999999998
Q ss_pred HHHHHHHHHHHhhccC
Q psy4866 475 VSSLVCTVYLYYFLLE 490 (537)
Q Consensus 475 ~~~~~~~~~~~~~~~~ 490 (537)
++.++..++...+.++
T Consensus 159 ~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 159 ILSLIAAILFILFLPE 174 (352)
T ss_dssp HHHHHHHHHHHCCC--
T ss_pred chhhhhhhhHhhhhhh
Confidence 8888887754444433
No 169
>PRK09952 shikimate transporter; Provisional
Probab=99.24 E-value=3.5e-10 Score=112.67 Aligned_cols=145 Identities=15% Similarity=0.106 Sum_probs=108.0
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHhHhhh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS----RSVLGLYVMRTLQGFSMAA 173 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~ 173 (537)
++|.+......+.....+...++.+++|+++||+|||++++.+.++..++.+..... ++.+.+++..++.|++.+.
T Consensus 280 ~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 359 (438)
T PRK09952 280 NLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDM 359 (438)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Confidence 678887766666666677778888999999999999999988877665554433221 2344455566777888888
Q ss_pred hhhhhhhhhhccCCCcccchhhhHh-HHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHHHHHHhhcccCC
Q psy4866 174 IYVISPMYLGEISETSIRGTIGTLF-QISCHLGILYTYVLGSEL------SYMNYLTYSLIIPIIFTVTFMFMPES 242 (537)
Q Consensus 174 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~i~~~l~~~~------~wr~~~~~~~~~~~~~~~~~~~~~es 242 (537)
..+...+++.|.+|.+.|+...++. ..+..+|..++|.+.+.+ +|+..+.+.++..++..+..+.++|+
T Consensus 360 ~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 360 VVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 8888899999999999998888884 444557888888777653 37888888777777766666666654
No 170
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.24 E-value=2.9e-10 Score=112.48 Aligned_cols=163 Identities=13% Similarity=-0.033 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
...+...+|.+.++.+.+. ..+.......++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 29 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---------- 98 (406)
T PRK15402 29 NDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA---------- 98 (406)
T ss_pred hhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH----------
Confidence 3344444566666666653 33456677888889999999999999999999998888777776665442
Q ss_pred CcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhH
Q psy4866 396 IPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGV 475 (537)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 475 (537)
.+.+..++..++.+.+.+. ..+.....+.|.+|++.|+++.++......++..++|.+.+.+.+..+|+..+++.++
T Consensus 99 --~~~~~l~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~ 175 (406)
T PRK15402 99 --QSIEQFTLLRFLQGIGLCF-IGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAA 175 (406)
T ss_pred --ccHHHHHHHHHHHHhHhhh-HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHH
Confidence 2233333444444444333 2344567888999999999999999888889999999999999998899999988888
Q ss_pred HHHHHHHHHHhhccCCC
Q psy4866 476 SSLVCTVYLYYFLLETK 492 (537)
Q Consensus 476 ~~~~~~~~~~~~~~~~~ 492 (537)
+.+++.+..+...|+++
T Consensus 176 ~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 176 LAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHHhCCCCC
Confidence 87777665555566554
No 171
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.24 E-value=5.7e-10 Score=109.28 Aligned_cols=142 Identities=12% Similarity=0.053 Sum_probs=116.0
Q ss_pred hhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy4866 87 PVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTL 166 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l 166 (537)
...|.+.+ +.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+.++.++.+++.++.+++++++.+++..++
T Consensus 226 ~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (382)
T PRK11128 226 GFSAIYWQ---AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQIL 302 (382)
T ss_pred HHHHHHHH---HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 34455666 789999999999999999999999999999999999999999999999988888889999999999999
Q ss_pred HHhHhhhhhhhhhhhhhccCCCcccchhhhHhH-HHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHH
Q psy4866 167 QGFSMAAIYVISPMYLGEISETSIRGTIGTLFQ-ISCHLGILYTYVLGSEL----SYMNYLTYSLIIPIIFT 233 (537)
Q Consensus 167 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~i~~~l~~~~----~wr~~~~~~~~~~~~~~ 233 (537)
.|++.+...+....++.+. ++++++++.++.. ....+|..+++.+++.+ ++ ..|+..+++.++.+
T Consensus 303 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 303 HCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 9999999989999988887 5666788888875 55567777777777664 55 45555555555443
No 172
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.23 E-value=4.4e-10 Score=110.69 Aligned_cols=161 Identities=14% Similarity=0.078 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCc
Q psy4866 319 SIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIP 397 (537)
Q Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (537)
......|.+.++.+.+. ..+.......++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 26 ~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~------------ 93 (394)
T PRK11652 26 IYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA------------ 93 (394)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH------------
Confidence 33444577777777653 34467777888999999999999999999999998888777776655442
Q ss_pred ccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHH
Q psy4866 398 YTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSS 477 (537)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 477 (537)
.+.+..++..++.+.+.+. ..+....+..|.++.+.++.+.+..+....++..++|.+.+.+.+..||+..|.+.++..
T Consensus 94 ~~~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~ 172 (394)
T PRK11652 94 HSLTVLIAASAIQGLGTGV-GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLG 172 (394)
T ss_pred ccHHHHHHHHHHHHhhhhH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 2233334444444444333 234444677788888889999999999999999999999999999889998888877766
Q ss_pred HHHHHHHHhhccCCC
Q psy4866 478 LVCTVYLYYFLLETK 492 (537)
Q Consensus 478 ~~~~~~~~~~~~~~~ 492 (537)
++..++...+.||++
T Consensus 173 ~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 173 AGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHhCCccC
Confidence 665555555566643
No 173
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.23 E-value=4.5e-10 Score=112.63 Aligned_cols=160 Identities=10% Similarity=0.070 Sum_probs=119.0
Q ss_pred HHHhhhHHHHHHHHHHHHHhc---CCCC-ChhHHHHHHHHHHHHHhhhHhhhhcc-cCCcHHHHHhhHHHHHHHHHHHHH
Q psy4866 311 FRAFTGVQSIIAYANTIFASS---ETFL-PSDYISILFAIILLVSIFPSTYYIDR-AGRRVLFLVSSAGCSLFSFIAGLY 385 (537)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~ 385 (537)
+..-.+++.+..++|.|+.+. +.+. +++.......++..++.+++|+++|| +|||+.+..+.++.+++.+++.+.
T Consensus 20 ~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~ 99 (475)
T TIGR00924 20 LWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS 99 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc
Confidence 333344667788888888763 4442 45577777888999999999999999 899999999999988888776652
Q ss_pred HHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccc---cchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 386 YYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNM---KAVSCAVINILCTTLGLISYKLFFLMDK 462 (537)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 462 (537)
.+.+...+...+.+.+.+. ..+...++..+.+|++. |+++.++.+...++|.+++|.+.+++.+
T Consensus 100 ------------~~~~~~~~~~~l~g~g~g~-~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 100 ------------IYPDLIFYGLGTIAVGSGL-FKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred ------------ccHhHHHHHHHHHHhcccc-ccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333344444444433 34455578888888754 8889999999999999999999999999
Q ss_pred hhccchhhhHhhHHHHHHHHH
Q psy4866 463 HIGMYSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 463 ~~g~~~~~~~~~~~~~~~~~~ 483 (537)
+.||+..|.+.++.++++.+.
T Consensus 167 ~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 167 NYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred hcChHHHHHHHHHHHHHHHHH
Confidence 889998888877655555443
No 174
>PRK03699 putative transporter; Provisional
Probab=99.23 E-value=5.7e-10 Score=109.76 Aligned_cols=171 Identities=12% Similarity=0.055 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHH
Q psy4866 300 KAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLF 378 (537)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 378 (537)
++..+...+.++............+|.+.++.+.+. +.+.......++..++.++.|++.||+|||+.+..+.++..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 334444444444433334556666788777777653 3446677788899999999999999999999999888887777
Q ss_pred HHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHH
Q psy4866 379 SFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFF 458 (537)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 458 (537)
.++..+. ++.+..++..++.+.+.+... +....++.|.+|+++|+.+.+..+....+++.++|.+.+
T Consensus 86 ~~l~~~~------------~~~~~~~~~~~l~G~~~g~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 152 (394)
T PRK03699 86 VAGLMFS------------HSLALFSIAMFVLGVVSGITM-SIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAA 152 (394)
T ss_pred HHHHHHc------------chHHHHHHHHHHHHHhhHhhc-cchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666552 233344444455555555444 344578899999999999999998888999999999988
Q ss_pred HHHH-hhccchhhhHhhHHHHHHHHH
Q psy4866 459 LMDK-HIGMYSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 459 ~l~~-~~g~~~~~~~~~~~~~~~~~~ 483 (537)
.+.+ ..||+..|.+.+++.++..++
T Consensus 153 ~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 153 YLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHhccccHHHHHHHHHHHHHHHHHH
Confidence 8765 468998888877766655444
No 175
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.22 E-value=2.8e-10 Score=113.43 Aligned_cols=157 Identities=15% Similarity=0.026 Sum_probs=115.8
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHH
Q psy4866 305 MAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAG 383 (537)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 383 (537)
...+..+.............|.+.++.+.+. +.+.......++..++.++.|+++||+|||+.+..+.++.+++.++..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 101 (426)
T PRK12307 22 SAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSG 101 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 3333333333334455556666666666653 345677778899999999999999999999999999998888877766
Q ss_pred HHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4866 384 LYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH 463 (537)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 463 (537)
+. ++.+..++.-++.+.+.+.. .+....++.|.+|+++|+++.++......+|.++++.+.+.+.+.
T Consensus 102 ~~------------~~~~~l~~~r~l~G~g~g~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~ 168 (426)
T PRK12307 102 LA------------SGVIMLTLSRFIVGMGMAGE-YACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA 168 (426)
T ss_pred HH------------hHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc
Confidence 53 23344444455555554433 344558889999999999999999999999999999999988888
Q ss_pred hccchhhhHhh
Q psy4866 464 IGMYSNFLFGG 474 (537)
Q Consensus 464 ~g~~~~~~~~~ 474 (537)
.||+..|++..
T Consensus 169 ~~w~~~f~i~~ 179 (426)
T PRK12307 169 YGWRAAFFVGL 179 (426)
T ss_pred CCHHHHHHHHH
Confidence 89998887643
No 176
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.22 E-value=2.2e-10 Score=116.02 Aligned_cols=158 Identities=14% Similarity=0.087 Sum_probs=119.2
Q ss_pred hccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH-----h-
Q psy4866 82 FAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS-----R- 155 (537)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~-----~- 155 (537)
........|.+.+ ++|.+..+.++......++..++.+++|+++||+|||+.+.++.++.+++.++.++. +
T Consensus 300 ~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (481)
T TIGR00879 300 INAIMYYSPTIFE---NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTG 376 (481)
T ss_pred CeehHHHHHHHHH---HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCC
Confidence 3344555677777 789998888999999999999999999999999999999999988888777766521 1
Q ss_pred -----hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHH
Q psy4866 156 -----SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSL 226 (537)
Q Consensus 156 -----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~ 226 (537)
+...+....++.+.......+....++.|.+|+++|++++++......+|.++++.+.+. .+|++.|++.+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~ 456 (481)
T TIGR00879 377 SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFG 456 (481)
T ss_pred cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHH
Confidence 222333333333333233346667778999999999999999999999999999887765 37899998888
Q ss_pred HHHHHHHHHh-hcccCC
Q psy4866 227 IIPIIFTVTF-MFMPES 242 (537)
Q Consensus 227 ~~~~~~~~~~-~~~~es 242 (537)
+++++..+.. ++.||+
T Consensus 457 ~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 457 GLNVLGLIFVYFFLPET 473 (481)
T ss_pred HHHHHHHHHHheecccC
Confidence 8877655544 456665
No 177
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.20 E-value=6e-10 Score=109.60 Aligned_cols=160 Identities=13% Similarity=0.034 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHH-hcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhcccc
Q psy4866 317 VQSIIAYANTIFA-SSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQY 394 (537)
Q Consensus 317 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (537)
.+....+++.+++ +.+.+. ..+.......+...+..++.|+++||+|||+.+..+..+..++.+.+...
T Consensus 26 ~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~--------- 96 (400)
T PRK11646 26 FFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA--------- 96 (400)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh---------
Confidence 4455556666654 445542 33455566677777888999999999999999999999888887776552
Q ss_pred CCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhh
Q psy4866 395 EIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGG 474 (537)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 474 (537)
++.+...+...+.+.+.+. ..+...+++.+.+|+++|+++.|+.+...++|..++|.+.+.+. ..||+..|++.+
T Consensus 97 ---~~~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~ 171 (400)
T PRK11646 97 ---HEPWLLWLSCILSGLGGTL-FDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGA 171 (400)
T ss_pred ---ccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 2334444444455554433 33445578899999999999999999999999999999999998 679998888877
Q ss_pred HHHHHHHHHHHhhccC
Q psy4866 475 VSSLVCTVYLYYFLLE 490 (537)
Q Consensus 475 ~~~~~~~~~~~~~~~~ 490 (537)
+++++..++...+.++
T Consensus 172 ~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 172 VLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHhCCc
Confidence 7776665554455554
No 178
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.20 E-value=2.6e-10 Score=111.70 Aligned_cols=160 Identities=12% Similarity=0.081 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCc
Q psy4866 319 SIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIP 397 (537)
Q Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (537)
.....+|.+.++.+.+. +.+.......++..++.++.|++.||+|||+.+..+.++..++.+.+...
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~------------ 76 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA------------ 76 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH------------
Confidence 34455677777766653 44567777888999999999999999999999999988888887776553
Q ss_pred ccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHH
Q psy4866 398 YTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSS 477 (537)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 477 (537)
.+.+...+..++.+.+.+.. .+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..+.+.+++.
T Consensus 77 ~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 155 (377)
T PRK11102 77 QTIDQLIYMRFLHGLAAAAA-SVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAA 155 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 23334444445555554433 34455888999999999999999999999999999999999999889998888888777
Q ss_pred HHHHHHHHhhccCC
Q psy4866 478 LVCTVYLYYFLLET 491 (537)
Q Consensus 478 ~~~~~~~~~~~~~~ 491 (537)
++..++...+.+|+
T Consensus 156 ~~~~~~~~~~~~~~ 169 (377)
T PRK11102 156 ILAAALVFFFIPET 169 (377)
T ss_pred HHHHHHHHHhCCcc
Confidence 77766665566654
No 179
>PRK11043 putative transporter; Provisional
Probab=99.19 E-value=1.1e-09 Score=108.13 Aligned_cols=151 Identities=15% Similarity=-0.011 Sum_probs=109.9
Q ss_pred HHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccch
Q psy4866 323 YANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSW 401 (537)
Q Consensus 323 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (537)
..|.+.++.+.+. +.+....+..++..++.++.|+++||+|||+.+..+..+..++.+...+. .+.+
T Consensus 28 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------------~~~~ 95 (401)
T PRK11043 28 AFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV------------ESAA 95 (401)
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh------------cCHH
Confidence 3344555656552 44567777888899999999999999999999998888777766665542 2233
Q ss_pred hhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHH
Q psy4866 402 VPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCT 481 (537)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 481 (537)
..++..++.+.+.+.. .+....+..|.+|+++++...+..+....++..++|.+.+.+.+..||+..+.+.+++.++..
T Consensus 96 ~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 174 (401)
T PRK11043 96 QLLVLRFVQAVGVCSA-AVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLI 174 (401)
T ss_pred HHHHHHHHHHhhhHHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 3333344444443332 233446788999999888999999988999999999999999999999988888877777665
Q ss_pred HHHHh
Q psy4866 482 VYLYY 486 (537)
Q Consensus 482 ~~~~~ 486 (537)
++.+.
T Consensus 175 ~~~~~ 179 (401)
T PRK11043 175 LPTLR 179 (401)
T ss_pred HHHHH
Confidence 55433
No 180
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.19 E-value=4.5e-10 Score=108.59 Aligned_cols=162 Identities=9% Similarity=-0.020 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
...+...+|.+.++.+.+. +.++....+.++..++.+..|+++||+|||+++.........+.. ....
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~---------- 75 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLD---------- 75 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHH----------
Confidence 3445556677777777653 344677778888999999999999999988876544433333221 1111
Q ss_pred CcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhH
Q psy4866 396 IPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGV 475 (537)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 475 (537)
..+.+..++.-++.+.+.+. . ........|.+|+++|++++++.+....+|..+++.+.+.+.+..||+..|.+.++
T Consensus 76 -~~~~~~l~~~R~l~G~g~~~-~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~ 152 (368)
T TIGR00903 76 -PFNYEWLLACQLLAALGQPF-L-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAA 152 (368)
T ss_pred -hccHHHHHHHHHHHHhHhHH-H-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 01233444444555555443 2 23345568999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHhhccCCC
Q psy4866 476 SSLVCTVYLYYFLLETK 492 (537)
Q Consensus 476 ~~~~~~~~~~~~~~~~~ 492 (537)
+.++..++.++++||.+
T Consensus 153 l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 153 VAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 88887777777777754
No 181
>KOG3098|consensus
Probab=99.18 E-value=1.5e-08 Score=97.62 Aligned_cols=103 Identities=21% Similarity=0.184 Sum_probs=90.5
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCc
Q psy4866 110 VAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETS 189 (537)
Q Consensus 110 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 189 (537)
.++-+..+.+++++.+.+.|+.|.|..+.++...+....+..-+ .|-+.+++.-.+.|+|.+..+..--.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77788888999999999999999999999999999888777655 45677788999999999999999999999999999
Q ss_pred ccchhhhHhHHHHHHHHHHHHHHh
Q psy4866 190 IRGTIGTLFQISCHLGILYTYVLG 213 (537)
Q Consensus 190 ~r~~~~~~~~~~~~~G~~i~~~l~ 213 (537)
.+.+..++.-.....+.++|..+-
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhh
Confidence 999999998888888887776554
No 182
>KOG3762|consensus
Probab=99.18 E-value=2.4e-10 Score=108.87 Aligned_cols=156 Identities=12% Similarity=0.076 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
...+.+++--.+++.+... --+.....--.+.++.-++.+++.+|+|+-+++..++.+..+-++.+...
T Consensus 387 ~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L---------- 456 (618)
T KOG3762|consen 387 VGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL---------- 456 (618)
T ss_pred HHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh----------
Confidence 3444455544555554321 11233444456677888889999999999999999988888877776654
Q ss_pred CcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHH-HHHHHHHHHHHHHHHHHhhccchhhhHhh
Q psy4866 396 IPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINIL-CTTLGLISYKLFFLMDKHIGMYSNFLFGG 474 (537)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 474 (537)
.++|..+..-++-+...+..+..+. +|++...|++.++++.++.... ..+|-.+|.++.|.+.+.+|.+..|.+++
T Consensus 457 --~n~W~vLPieilqgit~aliWaa~~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~g 533 (618)
T KOG3762|consen 457 --QNPWMVLPIEILQGITHALIWAAII-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFG 533 (618)
T ss_pred --cCchheeeHHHHHHHHHHHHHHHHH-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHH
Confidence 4677777777788888888777665 9999999999999999998765 47888899999999999999998898888
Q ss_pred HHHHHHHHHHH
Q psy4866 475 VSSLVCTVYLY 485 (537)
Q Consensus 475 ~~~~~~~~~~~ 485 (537)
+.+++.+++..
T Consensus 534 iAcl~~l~~~~ 544 (618)
T KOG3762|consen 534 IACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHH
Confidence 88877666543
No 183
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.17 E-value=8.7e-10 Score=108.60 Aligned_cols=137 Identities=21% Similarity=0.321 Sum_probs=113.7
Q ss_pred CCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhh
Q psy4866 99 IPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVIS 178 (537)
Q Consensus 99 ~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 178 (537)
.+.+....|.+.++..+...++.+..|++.||+|||+.+.++.++.+++.++..+++|.+.+++.++++|++........
T Consensus 249 ~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 328 (396)
T TIGR00882 249 PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGC 328 (396)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 35566678999999999999999999999999999999999999998888887888899999999999999987777777
Q ss_pred hhhhhccCCCcccchhhhH-hHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHH
Q psy4866 179 PMYLGEISETSIRGTIGTL-FQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVT 235 (537)
Q Consensus 179 ~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~ 235 (537)
..++.+..+++.++...+. ++....+|.++++.+++. +||+..|.+.+++.++..+.
T Consensus 329 ~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 329 FKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 7788888888877776665 567778888888777655 48899999988887665443
No 184
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.17 E-value=7.4e-10 Score=110.85 Aligned_cols=149 Identities=11% Similarity=0.072 Sum_probs=127.3
Q ss_pred chhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q psy4866 85 SAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMR 164 (537)
Q Consensus 85 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r 164 (537)
...++|.+.++ .+|.+....|++.+++.+|..+|.++.+++.+|+++++.+..+.++++++.+..+++++.+..++.-
T Consensus 237 ~~aLlPl~a~~--~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARD--VLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHH--HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 34557777653 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHH
Q psy4866 165 TLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVT 235 (537)
Q Consensus 165 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~ 235 (537)
++.|++.........+.+.+..|++.||++++++.+....+..+|.++.+. +|-+..+.+.++..++..++
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 999999999988999999999999999999999887777777666666554 57778887777655444433
No 185
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.17 E-value=6.4e-10 Score=109.21 Aligned_cols=154 Identities=12% Similarity=0.137 Sum_probs=117.4
Q ss_pred chhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHH
Q psy4866 85 SAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR-SVLGLYVM 163 (537)
Q Consensus 85 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~-~~~~l~~~ 163 (537)
....+|.+.+ ++|.+..+.+.+.+.+.++..++.++.|++.||+|||+.+.++..+..++.++....+ +...+ .
T Consensus 224 ~~~~lp~~l~---~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~ 298 (393)
T PRK09705 224 LIAWLPAFYI---EIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--W 298 (393)
T ss_pred HHHHHHHHHH---HcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--H
Confidence 3445667777 7799999999999999999999999999999999999999998888777766554333 22222 2
Q ss_pred HHHHHhHhhhhhhhhhhhhhccCC-CcccchhhhHhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHHHH-HHh
Q psy4866 164 RTLQGFSMAAIYVISPMYLGEISE-TSIRGTIGTLFQISCHLGILYTYVLGSEL-----SYMNYLTYSLIIPIIFT-VTF 236 (537)
Q Consensus 164 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----~wr~~~~~~~~~~~~~~-~~~ 236 (537)
-++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++ +|...|.+.++.+++.. +..
T Consensus 299 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK09705 299 AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITL 378 (393)
T ss_pred HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 346688888888877777777775 56789999999999999988888887664 36777887777766544 335
Q ss_pred hcccCCh
Q psy4866 237 MFMPESP 243 (537)
Q Consensus 237 ~~~~esp 243 (537)
.+.||++
T Consensus 379 ~~~~~~~ 385 (393)
T PRK09705 379 RFAPARF 385 (393)
T ss_pred Hhccccc
Confidence 5667764
No 186
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.16 E-value=6.2e-10 Score=113.31 Aligned_cols=158 Identities=13% Similarity=0.073 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHH
Q psy4866 303 VFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 381 (537)
+....+..+.............|.+.++.+.+. +.+.......++..++.++.|++.||+|||+.+..+.++.+++.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 101 (496)
T PRK03893 22 FSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLA 101 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 333334433333345555666677777776653 3446677778888999999999999999999999888888887776
Q ss_pred HHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 382 AGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMD 461 (537)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 461 (537)
+.+. .+.+..++..++.+.+.+.. .+....++.|.+|+++|+.+.++.+....+|..+++.+.+.+.
T Consensus 102 ~~~~------------~~~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 102 CGFA------------PGYWTLFIARLVIGMGMAGE-YGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHH------------hHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6653 23344444445555544433 3445588899999999999999999999999999999999999
Q ss_pred HhhccchhhhHh
Q psy4866 462 KHIGMYSNFLFG 473 (537)
Q Consensus 462 ~~~g~~~~~~~~ 473 (537)
+..||+..|.+.
T Consensus 169 ~~~~w~~~f~~~ 180 (496)
T PRK03893 169 PVWGWRALFFIG 180 (496)
T ss_pred ccCCHHHHHHHH
Confidence 988999877653
No 187
>KOG1330|consensus
Probab=99.15 E-value=3.1e-11 Score=113.12 Aligned_cols=147 Identities=14% Similarity=0.227 Sum_probs=123.6
Q ss_pred ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHh
Q psy4866 336 PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFN 415 (537)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (537)
..+++...+.+...++++++|++.||++|++++.+|..+..++.+...+. ...|..++.=.+.+.+-+
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs------------~~Fwq~~l~R~~vGiGeA 136 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS------------NHFWQVLLCRGFVGIGEA 136 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH------------HHHHHHHHHHHHhccchh
Confidence 44578888999999999999999999999999999999998888877764 234555555555666654
Q ss_pred hccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhhhHhhHHHHHHHHHHHhhccCCCCC
Q psy4866 416 LGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG-MYSNFLFGGVSSLVCTVYLYYFLLETKGK 494 (537)
Q Consensus 416 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (537)
.+.|+..++++|.+|.++|++++++.++...+|..+|-.+.+.+.+..+ |+++|...+++.++..++..++.+|..++
T Consensus 137 -s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 137 -SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred -hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 4677888999999999999999999999999999999888888887777 88999999999999999988888877655
Q ss_pred C
Q psy4866 495 T 495 (537)
Q Consensus 495 ~ 495 (537)
.
T Consensus 216 a 216 (493)
T KOG1330|consen 216 A 216 (493)
T ss_pred c
Confidence 3
No 188
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.15 E-value=1.3e-09 Score=96.95 Aligned_cols=171 Identities=17% Similarity=0.147 Sum_probs=127.9
Q ss_pred HHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHH
Q psy4866 65 SFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPIT 144 (537)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~ 144 (537)
|+.++.........|..+ .++..-|++++ .+|.|++|...+.++-.+|..+| ++.|.+.|++|++.++++|.+..
T Consensus 2 W~~l~a~~~v~~~~Gt~Y-~Fs~yS~~Lk~---~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~ 76 (250)
T PF06813_consen 2 WLSLVASIWVQLCSGTTY-TFSAYSPQLKS---RLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLG 76 (250)
T ss_pred hhhHHHHHHHHHhcCccc-chhhhhHHHHH---HhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHH
Confidence 445555555555555333 34555678888 99999999999999999999874 88999999999999999999999
Q ss_pred HHHHHHHHHH-------hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-
Q psy4866 145 TASWIIAMYS-------RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL- 216 (537)
Q Consensus 145 ~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~- 216 (537)
.+|..+..++ .++|.+.+..++.|.+.+....++.....+.||+ +||.+.++.-...+++..+-..+...+
T Consensus 77 ~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 77 FVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 9999887664 3678888888888888877777777777788974 799999999999999988766655443
Q ss_pred --h-HHHHHHHHHHHHHHHHHHhhcccC
Q psy4866 217 --S-YMNYLTYSLIIPIIFTVTFMFMPE 241 (537)
Q Consensus 217 --~-wr~~~~~~~~~~~~~~~~~~~~~e 241 (537)
+ -...+.+.....++.++..++++.
T Consensus 156 ~~~~~~fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 156 GDDPSSFLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred CCChHHHHHHHHHHHHHHHHHHhhheec
Confidence 2 233333333444445555555543
No 189
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.15 E-value=4.1e-10 Score=113.48 Aligned_cols=142 Identities=8% Similarity=-0.019 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhc
Q psy4866 338 DYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLG 417 (537)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (537)
+.....+.++..++.++.|++.||+|+|+.+..+.++..++.++..+.. ....+..++.-++.+.+.+.
T Consensus 79 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~~~G~~~~~- 147 (465)
T TIGR00894 79 GLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA----------GGGIALVVFCRVIQGLAQGS- 147 (465)
T ss_pred hHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH----------HcCchHHHHHHHHHHHhccc-
Confidence 3567778889999999999999999999999988887777766543321 11223334444455555444
Q ss_pred cccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh-hccchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 418 FGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH-IGMYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 418 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
..+....++.|.+|+++|++++|+.+....+|.++++.+.+.+.+. .||+..|++.+++.++..++.+.+.++
T Consensus 148 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 148 VSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred chhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 4455668999999999999999999999999999999999999988 499999998888777666655455444
No 190
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.14 E-value=1.3e-09 Score=106.33 Aligned_cols=164 Identities=13% Similarity=0.057 Sum_probs=112.4
Q ss_pred hhhHHHHHHHHHH-HHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhc
Q psy4866 314 FTGVQSIIAYANT-IFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIE 391 (537)
Q Consensus 314 ~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (537)
+........+.|. +.++.+.+. ..++......++..++.++.|+++||+|||+.+..+.++..++.+++.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~----- 88 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV----- 88 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh-----
Confidence 3345566677775 445566653 345777788899999999999999999999999999988888877765531
Q ss_pred cccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh--------
Q psy4866 392 LQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH-------- 463 (537)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-------- 463 (537)
.+.+..++..++.+.+. ... +....++.|.+|+++|+++.++.....++|..+++.+.+.+...
T Consensus 89 ------~~~~~~~~~~~~~g~~~-~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 160 (366)
T TIGR00886 89 ------QSYSVLLLLRLFIGIAG-GSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP 160 (366)
T ss_pred ------hhHHHHHHHHHHHHHhc-hhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 02333444444444443 223 33457889999999999999999988888888888877766653
Q ss_pred --hccchhh-hHhhHHHHHHHHHHHhhccC
Q psy4866 464 --IGMYSNF-LFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 464 --~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 490 (537)
.+|++.+ ...+++..+..++.+.+.++
T Consensus 161 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 161 AHLAWGWAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHhccc
Confidence 3788777 43344444444444444444
No 191
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.14 E-value=3.7e-09 Score=107.46 Aligned_cols=147 Identities=16% Similarity=0.079 Sum_probs=102.7
Q ss_pred hHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhc
Q psy4866 338 DYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLG 417 (537)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (537)
+.......++.+++.++.|++.||+|||+.+..+.++..++.++......... ....+..++.-++.+.+.+..
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~------~~~~~~~~~~r~l~G~~~g~~ 132 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSP------KSVMATLCFWRFWLGVGIGGD 132 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCccc------chHHHHHHHHHHHHHHHHhhh
Confidence 35677788899999999999999999999999888888887766554210000 000233445555556665554
Q ss_pred cccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH-----------------------hhccchhhhHhh
Q psy4866 418 FGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK-----------------------HIGMYSNFLFGG 474 (537)
Q Consensus 418 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~-----------------------~~g~~~~~~~~~ 474 (537)
. +....++.|.+|++.|++++++.+....+|..+++.+...+.. ..+|+..+.+.+
T Consensus 133 ~-~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ 211 (502)
T TIGR00887 133 Y-PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGA 211 (502)
T ss_pred h-HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHH
Confidence 4 4456999999999999999999999999999998887765532 136887775555
Q ss_pred HHHHHHHHHHHhhccCCC
Q psy4866 475 VSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~ 492 (537)
+..++. ++..+++||+.
T Consensus 212 ip~~i~-~~~~~~lpESp 228 (502)
T TIGR00887 212 VPALLA-LYFRLTIPETP 228 (502)
T ss_pred HHHHHH-HHHHHhCCCCH
Confidence 444443 33346678764
No 192
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.13 E-value=6.8e-10 Score=91.61 Aligned_cols=135 Identities=19% Similarity=0.166 Sum_probs=103.6
Q ss_pred HHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccch
Q psy4866 343 LFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLF 422 (537)
Q Consensus 343 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (537)
...++.+++.++.+++.||++||+.+..+..+..++.+.+... .+.+...+...+.+.+.+.. .+..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~~~~~-~~~~ 72 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS------------SNITVLIIARFLQGFGAAFA-LVAG 72 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHHHHHHH-HHhH
Confidence 3467788899999999999999999988887777776655442 23344444455555554443 3456
Q ss_pred hhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 423 TPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 423 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
..+..|.+|++.|+++.++.+....++..+++.+.+.+.+..+++..+.+.+.+.+++.+..+.+.||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 73 AALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 68899999999999999999999999999999999999998888888888777777776666555443
No 193
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.13 E-value=3.3e-09 Score=106.43 Aligned_cols=157 Identities=15% Similarity=0.139 Sum_probs=111.3
Q ss_pred HHhhhHHHHHHHHHHHHHh-cCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcc-cCCcHHHHHhhHHHHHHHHHHHHHHHh
Q psy4866 312 RAFTGVQSIIAYANTIFAS-SETFL-PSDYISILFAIILLVSIFPSTYYIDR-AGRRVLFLVSSAGCSLFSFIAGLYYYV 388 (537)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (537)
..-.+++.+..+++.|+.+ .+.+. ++......+.....+..+++|+++|| +|||+.+..+.++..++.+++.+..
T Consensus 25 ~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~-- 102 (489)
T PRK10207 25 WERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL-- 102 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc--
Confidence 3334466777777777655 34442 23344555566666777789999999 9999999999999999887776531
Q ss_pred hhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCcc--ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 389 TIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSN--MKAVSCAVINILCTTLGLISYKLFFLMDKHIGM 466 (537)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 466 (537)
.......+...+.+.+.+. ..+...+++.|.+|++ +|+.++++.+...++|.+++|.+.|++.++.||
T Consensus 103 ---------~~~~ll~~~~~l~~ig~g~-~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw 172 (489)
T PRK10207 103 ---------LKPDLIFIALGTIAVGNGL-FKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY 172 (489)
T ss_pred ---------cchhHHHHHHHHHHhcccc-ccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 1112222334444444443 3445568999999887 457799999999999999999999999999999
Q ss_pred chhhhHhhHHHHHH
Q psy4866 467 YSNFLFGGVSSLVC 480 (537)
Q Consensus 467 ~~~~~~~~~~~~~~ 480 (537)
++.|++.++..+++
T Consensus 173 ~~~F~i~~i~~~~~ 186 (489)
T PRK10207 173 SVTYNLCGAGLIIA 186 (489)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888865544433
No 194
>TIGR00898 2A0119 cation transport protein.
Probab=99.12 E-value=1.5e-09 Score=110.66 Aligned_cols=135 Identities=13% Similarity=0.190 Sum_probs=110.8
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHhHhhhhhhhhhhhhhcc
Q psy4866 108 WVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSV--LGLYVMRTLQGFSMAAIYVISPMYLGEI 185 (537)
Q Consensus 108 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 185 (537)
+......+....+.++.+++.||+|||+++.++.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34445566777888999999999999999999999998888888777654 5555666777788888888899999999
Q ss_pred CCCcccchhhhHhHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHhhcccCC
Q psy4866 186 SETSIRGTIGTLFQISCHLGILYTYVLGSE--LSYMNYLTYSLIIPIIFTVTFMFMPES 242 (537)
Q Consensus 186 ~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~--~~wr~~~~~~~~~~~~~~~~~~~~~es 242 (537)
+|++.|+.++++.+....+|.+++|.+.+. .++...+.+.+...++..+..+++||+
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 999999999999999999999999988873 245667777777777777777788887
No 195
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.10 E-value=3.8e-09 Score=104.61 Aligned_cols=168 Identities=15% Similarity=0.143 Sum_probs=136.1
Q ss_pred HHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhh--HHHHHHHHHHHH
Q psy4866 69 VTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRK--WSLLMTGPITTA 146 (537)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~l~~~ 146 (537)
++++...+.+|++.- .......-.+ ++|++..++..+.-+..+...+|++++|++.||+|.| ++++++++++.+
T Consensus 286 fLia~~l~~dg~~ti-~~~~~i~a~~---~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~ 361 (477)
T PF11700_consen 286 FLIAYFLYSDGVNTI-ISFAGIYATE---VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWII 361 (477)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHH---hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 333333444554333 2222334445 8999999999999999999999999999999999998 899998888866
Q ss_pred HHHHHHH--------HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh--
Q psy4866 147 SWIIAMY--------SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-- 216 (537)
Q Consensus 147 ~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-- 216 (537)
..+...+ .++.+.+.+.-++.|+..|..++..-++.+|..|+++.+..+|++....-....+||++.+.+
T Consensus 362 i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~ 441 (477)
T PF11700_consen 362 IPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITD 441 (477)
T ss_pred HHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666555 568888999999999999999999999999999999999999999999999999999988775
Q ss_pred ---hHHHHHHHHHHHHHHHHHHhhccc
Q psy4866 217 ---SYMNYLTYSLIIPIIFTVTFMFMP 240 (537)
Q Consensus 217 ---~wr~~~~~~~~~~~~~~~~~~~~~ 240 (537)
+-|+.+....++.++.++++++++
T Consensus 442 ~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 442 ATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 367888877777777777766664
No 196
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.10 E-value=9.4e-09 Score=100.50 Aligned_cols=180 Identities=10% Similarity=-0.034 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHH-hcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHH
Q psy4866 302 FVFMAFLAVFRAFTGVQSIIAYANTIFA-SSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFS 379 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 379 (537)
.++...+.+...+..........+.+-+ +.+.+. +.+....+..+...+.++..|++.||+|.|+.+..+.++..+..
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~ 114 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPC 114 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 3444444444433333344444444433 345542 34466677788888899999999999999999999988887777
Q ss_pred HHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 380 FIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFL 459 (537)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 459 (537)
+...+.... ..++.+..++.-++.+.+ +..+ +.....+++.+|+++||++.|+....+++|..+++.+.+.
T Consensus 115 ~~~~~a~~~-------~~~s~~~lli~r~l~Gig-g~~f-~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 115 VWLGIAVQN-------PNTPFGIFIVIALLCGFA-GANF-ASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHcc-------cCCCHHHHHHHHHHHHHH-HHhH-HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 766542100 012344455555555554 3334 4455888999999999999999987777777766665544
Q ss_pred HH-----Hhh-------------ccchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 460 MD-----KHI-------------GMYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 460 l~-----~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
+. +.. +++.+..+...+.++..++.+++.++
T Consensus 186 ~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 186 VIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33 322 24445556666666666666555444
No 197
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.07 E-value=6.5e-09 Score=102.21 Aligned_cols=145 Identities=10% Similarity=0.014 Sum_probs=108.8
Q ss_pred hHHhhhcCCCCCCCCCChhhHHHHHHH-HHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHH------HhhHHHH
Q psy4866 88 VLEELLSKESPIPMSPNEGSWVVAIIE-IGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMY------SRSVLGL 160 (537)
Q Consensus 88 ~~~~~~~~~~~~~~s~~~~~~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~------~~~~~~l 160 (537)
..+.+.+ |.|.+.+++|++..... .+..++.++.|++.||+|+|+.+.++.++.++..+.... .++...+
T Consensus 230 ~~~~~l~---~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 230 LSKLYLV---DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HhhHHHH---hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 3455566 78999999999988876 466778899999999999999998877665333332221 1233344
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhccCCC-cccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHH
Q psy4866 161 YVMRTLQGFSMAAIYVISPMYLGEISET-SIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVT 235 (537)
Q Consensus 161 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~ 235 (537)
....++.+++.+...+...+.+.+..++ +++++.+++.+...++|..++|.+++. .||+..|++.+++.++..+.
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 307 WSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 5555666777788878888887777766 788999999999999999999988875 47888888887776665443
No 198
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.06 E-value=5.8e-09 Score=105.20 Aligned_cols=149 Identities=11% Similarity=0.101 Sum_probs=113.3
Q ss_pred HhhhcCCCCCCCCCChhhHHHH-HHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHH---HHH-hhHHHHHHHH
Q psy4866 90 EELLSKESPIPMSPNEGSWVVA-IIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIA---MYS-RSVLGLYVMR 164 (537)
Q Consensus 90 ~~~~~~~~~~~~s~~~~~~~~s-~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~---~~~-~~~~~l~~~r 164 (537)
|.+.+ ++|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.-
T Consensus 247 ~~l~~---~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 247 TFLIR---GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 44455 68999999999974 6668999999999999999999988877666555544332 232 3555555566
Q ss_pred HHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHhhccc
Q psy4866 165 TLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVTFMFMP 240 (537)
Q Consensus 165 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~~~~~~ 240 (537)
+++.++.|...+...++..+.++++.++...++.+...++|..+++.+.+. +||+..|.+.++++++.++...+++
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 776666666667778888999999999999999999889988776666554 4899999999888888776666554
Q ss_pred C
Q psy4866 241 E 241 (537)
Q Consensus 241 e 241 (537)
+
T Consensus 404 ~ 404 (491)
T PRK11010 404 Q 404 (491)
T ss_pred h
Confidence 3
No 199
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.05 E-value=8.4e-09 Score=104.13 Aligned_cols=158 Identities=10% Similarity=0.039 Sum_probs=106.3
Q ss_pred HhhhHHHHHHHHHHHHHh-cCCCCC-hhHHHHHHHHHHHHHhhhHhhhhcc-cCCcHHHHHhhHHHHHHHHHHHHHHHhh
Q psy4866 313 AFTGVQSIIAYANTIFAS-SETFLP-SDYISILFAIILLVSIFPSTYYIDR-AGRRVLFLVSSAGCSLFSFIAGLYYYVT 389 (537)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (537)
...+++.+..+++.++.+ .+.+.. +...............+++|+++|| +|||+.+..+.++..++..++.+.
T Consensus 33 ~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~---- 108 (500)
T PRK09584 33 ERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS---- 108 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh----
Confidence 334466677778888744 455432 2233333333444445689999999 599999999998888877666542
Q ss_pred hccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccc--cchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy4866 390 IELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNM--KAVSCAVINILCTTLGLISYKLFFLMDKHIGMY 467 (537)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 467 (537)
....+...+...+.+.+.+.. .+...++..|.+|++. +..+.++.+...++|.+++|.+.|++.+..||+
T Consensus 109 -------~~~~~~l~~~~~l~gig~g~~-~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~ 180 (500)
T PRK09584 109 -------GHDAGIVYMGMATIAVGNGLF-KANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWS 180 (500)
T ss_pred -------cccHHHHHHHHHHHHHhhhcc-cCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHH
Confidence 112222333334445544433 3445578899998653 456788889999999999999999999999999
Q ss_pred hhhhHhhHHHHHHHH
Q psy4866 468 SNFLFGGVSSLVCTV 482 (537)
Q Consensus 468 ~~~~~~~~~~~~~~~ 482 (537)
..|.+.++..+++.+
T Consensus 181 ~~F~i~~i~~~i~~i 195 (500)
T PRK09584 181 VAFALSVVGMLITVV 195 (500)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999887755555443
No 200
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.05 E-value=7.1e-09 Score=96.72 Aligned_cols=162 Identities=11% Similarity=-0.002 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
.+.+....+.+-++.+.+. +..++..+..+.+.+.+++.|++.||+|.|+....+.++..+-.+.+.+...
T Consensus 30 W~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~-------- 101 (417)
T COG2223 30 WTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVT-------- 101 (417)
T ss_pred HHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHcc--------
Confidence 3334444444445556653 4457777888999999999999999999999999999988888777766531
Q ss_pred CcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhhH
Q psy4866 396 IPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG---MYSNFLF 472 (537)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g---~~~~~~~ 472 (537)
..+.+..++...+.+.+.+ ...+...++++.+|++++|.++|+.. .+|+|..+...+.+.+....| |+.+..+
T Consensus 102 -~~~~~~ll~~gll~G~~Ga--sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i 177 (417)
T COG2223 102 -YPSTWQLLVIGLLLGLAGA--SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGI 177 (417)
T ss_pred -CCchHHHHHHHHHHhcccc--eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 1122334444444444322 23445589999999999999999999 999999999999999999988 8888888
Q ss_pred hhHHHHHHHHHHHhhccC
Q psy4866 473 GGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ 490 (537)
.....++..+..++...+
T Consensus 178 ~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 178 YVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 888888877777666544
No 201
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.04 E-value=8.8e-09 Score=102.61 Aligned_cols=152 Identities=14% Similarity=0.097 Sum_probs=96.4
Q ss_pred hhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHH--H--HhhHHHHHH
Q psy4866 87 PVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAM--Y--SRSVLGLYV 162 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~--~--~~~~~~l~~ 162 (537)
..+|.+.++ ++|.+..+.++..++..++..+++++.|+++||+|||+++.++.++.++..+... . .++....+.
T Consensus 264 ~~lp~~l~~--~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 264 TYMQKYLVN--TAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 345555431 6788888899999988888899999999999999999988777655433332221 1 122232222
Q ss_pred HHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHH-HHHHHHHHhhhh---h-HHHHHHHHHHHHHHHHHHhh
Q psy4866 163 MRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHL-GILYTYVLGSEL---S-YMNYLTYSLIIPIIFTVTFM 237 (537)
Q Consensus 163 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~i~~~l~~~~---~-wr~~~~~~~~~~~~~~~~~~ 237 (537)
.-++.+++.+...+....++.|++|++.|+.++++.+....+ +....|.+...+ + |...+++.++..++..+..+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 222233333444455667889999999999999997655443 233355555443 3 55566666666666555555
Q ss_pred ccc
Q psy4866 238 FMP 240 (537)
Q Consensus 238 ~~~ 240 (537)
+++
T Consensus 422 ~l~ 424 (432)
T PRK10406 422 MLH 424 (432)
T ss_pred Hhh
Confidence 543
No 202
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.03 E-value=9.2e-09 Score=102.92 Aligned_cols=114 Identities=15% Similarity=0.172 Sum_probs=97.4
Q ss_pred CCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHhHhhhhhhhhhh
Q psy4866 102 SPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS-RSVLGLYVMRTLQGFSMAAIYVISPM 180 (537)
Q Consensus 102 s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 180 (537)
+..+.+++.+...++..++.+++++++||+|+|+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888899999999999999999999999999998888887777665 36677778889999999999999999
Q ss_pred hhhccCC-------CcccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 181 YLGEISE-------TSIRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 181 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
+++|..+ ++++|.+.++.+....+|..+++.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998865 4557999999999999999888877765
No 203
>PRK15075 citrate-proton symporter; Provisional
Probab=99.03 E-value=7.5e-09 Score=103.20 Aligned_cols=129 Identities=13% Similarity=0.079 Sum_probs=91.5
Q ss_pred chhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHH-HH---HHhhHHHH
Q psy4866 85 SAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWII-AM---YSRSVLGL 160 (537)
Q Consensus 85 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~-~~---~~~~~~~l 160 (537)
.....|.+.++ .+|.+..+.++....+.++..++.+++|+++||+|||++++.+.++..+..+. .. ..+++..+
T Consensus 257 ~~~~~p~~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
T PRK15075 257 ITVYTPTFGKT--VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARM 334 (434)
T ss_pred HHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHH
Confidence 44446666652 47899889999999999999999999999999999999888765544332221 11 12344445
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHh-HHHHHHHHHHHHHHhhh
Q psy4866 161 YVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLF-QISCHLGILYTYVLGSE 215 (537)
Q Consensus 161 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~i~~~l~~~ 215 (537)
.+..++.|++.+...+....++.|.+|+++|+...++. +.+..++..++|.+.+.
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~ 390 (434)
T PRK15075 335 LAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTW 390 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHH
Confidence 45566667777777777778899999999999999985 33444445556666544
No 204
>KOG0569|consensus
Probab=99.03 E-value=6.2e-09 Score=101.29 Aligned_cols=174 Identities=16% Similarity=0.151 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHH
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGP 142 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 142 (537)
+...+.+++.++.-+.|.+.-. .....+.+ +-|++..+..++.....+...++.+++..+.||+|||+.++++..
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~--~Yst~i~~---~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~ 343 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIF--FYSTSIFK---TAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLS 343 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeH--HHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 3344555555555555544332 23345566 779999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh---hHH------HHHHHHHHHHhHhhhh-hhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHH-
Q psy4866 143 ITTASWIIAMYSR---SVL------GLYVMRTLQGFSMAAI-YVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYV- 211 (537)
Q Consensus 143 l~~~~~~~~~~~~---~~~------~l~~~r~l~G~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~- 211 (537)
++.+..+++.... +.. ..+++.++..++.+.. -|+..-+.+|.+|++.|+.++++......+..++-..
T Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~ 423 (485)
T KOG0569|consen 344 LMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFA 423 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9988887776532 111 1233344333333322 4777888999999999999999988777777665433
Q ss_pred ---HhhhhhHHHHHHHHHHHHHH-HHHHhhcccCC
Q psy4866 212 ---LGSELSYMNYLTYSLIIPII-FTVTFMFMPES 242 (537)
Q Consensus 212 ---l~~~~~wr~~~~~~~~~~~~-~~~~~~~~~es 242 (537)
+...+|- +.|....+++++ .+..+..+|||
T Consensus 424 fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 424 FPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 3333454 566666666655 44566779999
No 205
>KOG2504|consensus
Probab=99.01 E-value=2.9e-09 Score=106.06 Aligned_cols=167 Identities=16% Similarity=0.276 Sum_probs=146.3
Q ss_pred HHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhh--hhHHHHHHHHHHHHHH
Q psy4866 71 ACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIG--RKWSLLMTGPITTASW 148 (537)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~l~~~~~ 148 (537)
..++..+..+........+|.+.+ +.+.++.+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.+++.
T Consensus 303 ~~~~~~~~~~g~~~p~~~l~~~~~---~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 303 LALSNLFAYLGFNVPFVYLPSYAK---SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHH
Confidence 334444445555666777899999 89999999999999999999999999999999988 5677888889999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-----hHHHHHH
Q psy4866 149 IIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-----SYMNYLT 223 (537)
Q Consensus 149 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----~wr~~~~ 223 (537)
+.++++++++.++..-.+.|++.|.........+.|..+.++-..+.++.....+++.++||.+++.+ +|...|+
T Consensus 380 ~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~ 459 (509)
T KOG2504|consen 380 LFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFY 459 (509)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehh
Confidence 99999999999999999999999999888888999999999999999999999999999999998864 5888999
Q ss_pred HHHHHHHHHHHHhhccc
Q psy4866 224 YSLIIPIIFTVTFMFMP 240 (537)
Q Consensus 224 ~~~~~~~~~~~~~~~~~ 240 (537)
.+++..++..+.+++.|
T Consensus 460 ~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 460 FCGLCFLLSAVLLLILR 476 (509)
T ss_pred hcChHHHHHHHHHHHhH
Confidence 99988888777776665
No 206
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.01 E-value=1.1e-08 Score=100.84 Aligned_cols=157 Identities=6% Similarity=-0.014 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCC
Q psy4866 318 QSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEI 396 (537)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (537)
.......|.+.++.+.+. +.+.......++..++.+..|++.||+|||+.+..+..+.+++.+++.....
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~--------- 90 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE--------- 90 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 344566677777666653 4557778889999999999999999999999999999998888766543210
Q ss_pred cccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh-------------
Q psy4866 397 PYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH------------- 463 (537)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~------------- 463 (537)
..+.+..+...++.+.+.+....+ ...++.+..|++++++..++.+....+|..++|.+.+.+...
T Consensus 91 ~~~~~~~l~~~~l~G~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~ 169 (410)
T TIGR00885 91 IMNYTLFLVGLFILTAGLGFLETA-ANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKL 169 (410)
T ss_pred hccHHHHHHHHHHHHhhHHHHHhh-hhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhc
Confidence 123344455555666666554433 347777888999999999999999999999999998877532
Q ss_pred -------------hccchhhhHhhHHHHHHHHHH
Q psy4866 464 -------------IGMYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 464 -------------~g~~~~~~~~~~~~~~~~~~~ 484 (537)
.+|+.+|.+.+++.++..++.
T Consensus 170 ~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 170 SPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357778887777666554443
No 207
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.99 E-value=7.1e-09 Score=103.61 Aligned_cols=155 Identities=19% Similarity=0.119 Sum_probs=113.1
Q ss_pred HHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccc
Q psy4866 321 IAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTS 400 (537)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (537)
..-++.+..+.|.+.+..+......+...++.++.|+++|.+|||..++.+.++..++.++.+.. .+.
T Consensus 64 a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA------------~~~ 131 (599)
T PF06609_consen 64 ASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA------------QNM 131 (599)
T ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC------------CcH
Confidence 33445666677776666677778888999999999999999999999999999999998887653 233
Q ss_pred hhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHH
Q psy4866 401 WVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVC 480 (537)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 480 (537)
...+....+.+.+.+. ..+....++|..|.+.|+.+.++.....-....+++.+...+..+.+|++.|++.++...++
T Consensus 132 ~~~iag~~l~GvgaG~--~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~ 209 (599)
T PF06609_consen 132 NTFIAGMVLYGVGAGV--QELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIA 209 (599)
T ss_pred HHHHHHHHHHHHhhHH--HHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHH
Confidence 3455555665655433 33444668999999999887776665544445566776666666678999999988887777
Q ss_pred HHHHHhhcc
Q psy4866 481 TVYLYYFLL 489 (537)
Q Consensus 481 ~~~~~~~~~ 489 (537)
++..+++++
T Consensus 210 ~vl~~~fY~ 218 (599)
T PF06609_consen 210 LVLIFFFYF 218 (599)
T ss_pred HHHHHHHhC
Confidence 766555543
No 208
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.99 E-value=1.5e-08 Score=100.08 Aligned_cols=147 Identities=13% Similarity=0.110 Sum_probs=104.4
Q ss_pred HhhhcCCCCCCCCCChhhHHHHHHH-HHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHH---HHH-hhHHHHHHHH
Q psy4866 90 EELLSKESPIPMSPNEGSWVVAIIE-IGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIA---MYS-RSVLGLYVMR 164 (537)
Q Consensus 90 ~~~~~~~~~~~~s~~~~~~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~---~~~-~~~~~l~~~r 164 (537)
+.+.+ ++|.+..+.+++.+... ++..++.+++|++.||+|+|+.+.++.++..+..+.. ++. ++.+.+++.-
T Consensus 234 ~~l~~---~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK11902 234 TFLIR---GAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAI 310 (402)
T ss_pred HHHHH---hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 34556 78999999999986654 5689999999999999999998887777666554433 343 3555555444
Q ss_pred ----HHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 165 ----TLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSELSYMNYLTYSLIIPIIFTVTFMFM 239 (537)
Q Consensus 165 ----~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~~wr~~~~~~~~~~~~~~~~~~~~ 239 (537)
+..|++.+...+....++.+.+|.++++...+....+..++..++..+...+||+..|.+.++++++.++..+..
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777788888888888887776654444444444444455555566799999999998887766555443
No 209
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.98 E-value=2e-07 Score=95.79 Aligned_cols=150 Identities=14% Similarity=0.180 Sum_probs=120.5
Q ss_pred cchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh-hhhhHHHHHHHHHHHHHHHHHHHHhh------
Q psy4866 84 WSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR-IGRKWSLLMTGPITTASWIIAMYSRS------ 156 (537)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~l~~~~~~~~~~~~~------ 156 (537)
+.......+.+ .+|.+.++...+...+....-+..+++|+++|+ +||+++++++.++..+|.++.+++..
T Consensus 6 m~aiLvlYl~~---~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~ 82 (654)
T TIGR00926 6 MRTILVLYFLN---FLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82 (654)
T ss_pred cHHHHHHHHHH---HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 34444556666 789999999999999999999999999999997 89999999999999999988877521
Q ss_pred --HHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcc---cchhhhHhHHHHHHHHHHHHHHhhhh-----------hHHH
Q psy4866 157 --VLGLYVMRTLQGFSMAAIYVISPMYLGEISETSI---RGTIGTLFQISCHLGILYTYVLGSEL-----------SYMN 220 (537)
Q Consensus 157 --~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~i~~~l~~~~-----------~wr~ 220 (537)
....+++-.+..+|.|+.-+...+...|.+++++ |-..+.++..+.++|.++++.+..++ +|..
T Consensus 83 ~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~ 162 (654)
T TIGR00926 83 LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPL 162 (654)
T ss_pred hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHH
Confidence 2336677888889999999999999999997543 56778888889999999887776543 4888
Q ss_pred HHHHHHHHHHHHHHHh
Q psy4866 221 YLTYSLIIPIIFTVTF 236 (537)
Q Consensus 221 ~~~~~~~~~~~~~~~~ 236 (537)
.|.+.++..++.+++.
T Consensus 163 aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 163 AFGVPAILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8988888877655443
No 210
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.98 E-value=3.2e-08 Score=93.31 Aligned_cols=126 Identities=8% Similarity=0.003 Sum_probs=99.7
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVI 177 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 177 (537)
.+|+++.+.++..+.+..+..+|.++.+++.||+|+|+++.++.++..++.++....++... ..+-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999998888888887766665554333 34566899999999999
Q ss_pred hhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh----hHHHHHHHHH
Q psy4866 178 SPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL----SYMNYLTYSL 226 (537)
Q Consensus 178 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~----~wr~~~~~~~ 226 (537)
..+...+..|++ .+.+.++. ....+|.++.|.+.+.+ +.+..|++..
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 999999988754 45666665 45668888888766553 5566666433
No 211
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.98 E-value=2e-08 Score=112.73 Aligned_cols=142 Identities=12% Similarity=0.037 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhcc
Q psy4866 339 YISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGF 418 (537)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (537)
+...+..+..++..+++|+++||++||+++.....+..+.......... ..+.+..++..++.+.+.++ +
T Consensus 56 l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~---------~~s~~~l~~~~~l~gi~~a~-~ 125 (1140)
T PRK06814 56 LAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFH---------LNSVPLLFAALFLMGIHSAL-F 125 (1140)
T ss_pred HHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH---------HhhHHHHHHHHHHHHHHHHh-h
Confidence 4455667788899999999999999999764322222211111111110 12344555555555555544 4
Q ss_pred ccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCC
Q psy4866 419 GPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLET 491 (537)
Q Consensus 419 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (537)
.|...+++.+.+|++.++.++|+.++...+|.+++|.+.|.+.+..||...|...+++.++ .+++.++.++.
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 197 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKT 197 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCC
Confidence 5677799999999999999999999999999999999999999998888777333333333 33333444443
No 212
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=8.4e-09 Score=96.27 Aligned_cols=175 Identities=14% Similarity=0.135 Sum_probs=143.2
Q ss_pred HHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHH
Q psy4866 64 FSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPI 143 (537)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l 143 (537)
+-+..++++-..+.+|.+.-..... ..-.. ++|++..++.++.-...+..++|++++|+|.||+|.|+++.+++++
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~-~fg~~---~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi 327 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGG-VFGAA---DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVI 327 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHH-HHHHH---HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHH
Confidence 3455566666667777654433222 23344 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-----hH
Q psy4866 144 TTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-----SY 218 (537)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----~w 218 (537)
..+.++...+...-..+.++-.+.|...|+.+..+-++..+.+|+++-++.+++++...-.+..+||.+.+.+ +-
T Consensus 328 ~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~ 407 (438)
T COG2270 328 LSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSS 407 (438)
T ss_pred HHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcch
Confidence 9998888877777777778889999999999999999999999999999999999999999999999887664 45
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCC
Q psy4866 219 MNYLTYSLIIPIIFTVTFMFMPES 242 (537)
Q Consensus 219 r~~~~~~~~~~~~~~~~~~~~~es 242 (537)
|.-+....++..+.+++.+.+|+.
T Consensus 408 r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 408 RAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hhHHHHHHHHHHhhHhhEEeecCC
Confidence 766666666666666666666643
No 213
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.97 E-value=7.8e-09 Score=116.44 Aligned_cols=133 Identities=15% Similarity=0.106 Sum_probs=115.0
Q ss_pred CCCCCCC-hhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhh
Q psy4866 98 PIPMSPN-EGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYV 176 (537)
Q Consensus 98 ~~~~s~~-~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 176 (537)
.+|.+.. +.+++.+...++..++.+++|+++||+++|+++.++.++.+++.++..+..+++.++++.++.|++.++..+
T Consensus 262 ~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 341 (1146)
T PRK08633 262 VLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIV 341 (1146)
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Confidence 6889988 999999999999999999999999999999999999888888888888888999999999999999999999
Q ss_pred hhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHH
Q psy4866 177 ISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-----SYMNYLTYSLIIPI 230 (537)
Q Consensus 177 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-----~wr~~~~~~~~~~~ 230 (537)
...+++.+.+|+++||+++++.+....+|.++++.++..+ ++...+++.+.+.+
T Consensus 342 ~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 342 PLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 9999999999999999999999998888887777666543 34455555554433
No 214
>KOG2615|consensus
Probab=98.97 E-value=2.1e-09 Score=98.27 Aligned_cols=142 Identities=17% Similarity=0.248 Sum_probs=101.7
Q ss_pred hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhh
Q psy4866 337 SDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNL 416 (537)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (537)
+++....+++.+++.++..|.++||+|||.++..+.+..++...+.+.. .....++..=+.++.+-.
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S-------------~~F~afv~aR~l~Gi~kg 136 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS-------------RNFAAFVLARFLGGIFKG 136 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHhhhhccC
Confidence 4577788999999999999999999999999999999888877766652 233333332333343333
Q ss_pred ccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH---hhccchhhhHhhHHHHHH---HHHHHhhccC
Q psy4866 417 GFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK---HIGMYSNFLFGGVSSLVC---TVYLYYFLLE 490 (537)
Q Consensus 417 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~~~~~~~~~~~---~~~~~~~~~~ 490 (537)
.. .+..++++|++++++|+.+++.++...++|.++||.++|++.. ..|.+..++....++++. .....+++||
T Consensus 137 nl-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpE 215 (451)
T KOG2615|consen 137 NL-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPE 215 (451)
T ss_pred ch-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 33 4556999999999999999999999999999999999999987 445443332222222222 2334456777
Q ss_pred CC
Q psy4866 491 TK 492 (537)
Q Consensus 491 ~~ 492 (537)
|-
T Consensus 216 TL 217 (451)
T KOG2615|consen 216 TL 217 (451)
T ss_pred cc
Confidence 64
No 215
>KOG0637|consensus
Probab=98.94 E-value=4.9e-09 Score=98.36 Aligned_cols=138 Identities=15% Similarity=0.209 Sum_probs=104.7
Q ss_pred hhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh----hhhhHH-HHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR----IGRKWS-LLMTGPITTASWI 149 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~-l~~~~~l~~~~~~ 149 (537)
.|......++.+ ++.+ ++|++....+.+.-+..+...+.+++.|..+|| |||||. +..+.++..++.+
T Consensus 45 qf~wA~elsy~t----Pyl~---~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~ 117 (498)
T KOG0637|consen 45 QFGWALELSYLT----PYLQ---SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLF 117 (498)
T ss_pred HHHHHHHhcccc----HHHH---HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHh
Confidence 444444444433 3444 678888888888888888999999999999996 897655 5556777777878
Q ss_pred HHHHHhhH-----------------HHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccch-hhhHhHHHHHHHHHHHHH
Q psy4866 150 IAMYSRSV-----------------LGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGT-IGTLFQISCHLGILYTYV 211 (537)
Q Consensus 150 ~~~~~~~~-----------------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~i~~~ 211 (537)
+.+++.++ ..++++-.+.=++.-.....+-+++.|.+.++++.+ +++.+....++|..+|..
T Consensus 118 Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~ 197 (498)
T KOG0637|consen 118 LIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYA 197 (498)
T ss_pred hhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeee
Confidence 88877643 334455555666766788889999999997666666 999999999999999999
Q ss_pred HhhhhhHH
Q psy4866 212 LGSELSYM 219 (537)
Q Consensus 212 l~~~~~wr 219 (537)
++.+.+|+
T Consensus 198 ~g~y~~~~ 205 (498)
T KOG0637|consen 198 LGSYLGLY 205 (498)
T ss_pred cccccCce
Confidence 99887765
No 216
>PTZ00207 hypothetical protein; Provisional
Probab=98.94 E-value=2.9e-08 Score=99.97 Aligned_cols=165 Identities=13% Similarity=0.051 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
.+.+..+.+.+.++.+.+. +.+....+ +.......++.|++.||+|+|+++.++.++..++.++.++.....
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~------ 115 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV------ 115 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc------
Confidence 4566777788777777653 22222222 222234555789999999999999999999999988777632100
Q ss_pred CcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhH
Q psy4866 396 IPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGV 475 (537)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 475 (537)
...+.+...+..++.+.+.+... +.....+.+.+| ++||++.|+......+|+++.+.+...+.. .++...|++.++
T Consensus 116 i~~s~~~l~l~r~l~G~G~~~~~-~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~v 192 (591)
T PTZ00207 116 IEGSVVRLSVYNGLMTLGCMLFD-LGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMS 192 (591)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 01233334444444454443332 233466777887 568999999999999999876555554444 256667777777
Q ss_pred HHHHHHHHHHhhccCC
Q psy4866 476 SSLVCTVYLYYFLLET 491 (537)
Q Consensus 476 ~~~~~~~~~~~~~~~~ 491 (537)
+.++..++.+.+++..
T Consensus 193 l~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 193 FALVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHHHhheeCC
Confidence 7777766666665443
No 217
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.94 E-value=4.3e-08 Score=96.57 Aligned_cols=186 Identities=16% Similarity=0.084 Sum_probs=115.2
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhc----ccCCcHHHHHh-hHHHHHH
Q psy4866 305 MAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYID----RAGRRVLFLVS-SAGCSLF 378 (537)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d----~~~~~~~~~~~-~~~~~~~ 378 (537)
........++. +.....+++.|++..+.+. .......+..+.+++..++.|+++| |+|||+.++.+ .+...++
T Consensus 9 ~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~ 87 (477)
T TIGR01301 9 VASVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFA 87 (477)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHH
Confidence 33333333333 5566667777888777753 3446667778899999999999999 59999998775 4444444
Q ss_pred HHHHHHHHHhhhc--cccCCcccc---hhhHHHHHHHHHHHhhccccchhhhccccCCcccc--chhhHHHHHHHHHHHH
Q psy4866 379 SFIAGLYYYVTIE--LQYEIPYTS---WVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMK--AVSCAVINILCTTLGL 451 (537)
Q Consensus 379 ~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~g~~~~~~~~g~~ 451 (537)
++++.+....... .+.+..... +..++.+.+...+......|. .+++.|..|+++| +.+.++.+...++|+.
T Consensus 88 l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~~a~~~~~~~~~lG~i 166 (477)
T TIGR01301 88 VILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTRIANAYFSFFMAIGNV 166 (477)
T ss_pred HHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHHHHHHHHHHHHHHHHH
Confidence 4444332110000 000000011 122223333344444444444 5899999998865 5799999999999999
Q ss_pred HHHHHHHHH--HHhh-------------ccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 452 ISYKLFFLM--DKHI-------------GMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 452 ~~~~~~g~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
+++.+.+.. .+.. +.+..|++.+++.+++.++..+..+|..
T Consensus 167 lg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 167 LGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 999988764 2221 3456787877778888777777777754
No 218
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.94 E-value=5.9e-08 Score=94.34 Aligned_cols=162 Identities=18% Similarity=0.246 Sum_probs=123.5
Q ss_pred hhhhhhccchhhHHhhhcCCCCCC-CCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH-
Q psy4866 77 TTGMSFAWSAPVLEELLSKESPIP-MSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS- 154 (537)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~- 154 (537)
+.+...+......+.+.+ +.| .+....+.+.++..++-.+.-...+++..|+|.|++++++.+.+++=..+.+..
T Consensus 218 l~~~~~~~~~~f~~~yl~---~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~ 294 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQ---ELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS 294 (400)
T ss_pred HHHHHHHHHHHHHHHHHH---HcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334444444555555666 667 677778888888888889999999999999999999999999999988888887
Q ss_pred hhHHHHH----HHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHH-HHHHHHHHHHHHhhhh----------hHH
Q psy4866 155 RSVLGLY----VMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQI-SCHLGILYTYVLGSEL----------SYM 219 (537)
Q Consensus 155 ~~~~~l~----~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~i~~~l~~~~----------~wr 219 (537)
++.+... ....++|+..+..+..+..++.+.+|++.|+++.+++.. ..++|..+|..+++++ .|.
T Consensus 295 ~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~ 374 (400)
T PF03825_consen 295 DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWS 374 (400)
T ss_pred CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHH
Confidence 4544433 335679999999999999999999999999999999765 4688999888888763 355
Q ss_pred HHHHHHHHHHHHHHHH-hhcccC
Q psy4866 220 NYLTYSLIIPIIFTVT-FMFMPE 241 (537)
Q Consensus 220 ~~~~~~~~~~~~~~~~-~~~~~e 241 (537)
..+.+.+.+.++..++ +++.+|
T Consensus 375 ~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 375 AVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhhccC
Confidence 5666666665554433 334444
No 219
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.93 E-value=2.3e-08 Score=96.99 Aligned_cols=161 Identities=12% Similarity=0.018 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHhcCCCCC-hhHHHHHHHHHHHHHhhhHhhhhccc-----CCcHHH-HHhhHHHHHHHHHHHHHHHhhhc
Q psy4866 319 SIIAYANTIFASSETFLP-SDYISILFAIILLVSIFPSTYYIDRA-----GRRVLF-LVSSAGCSLFSFIAGLYYYVTIE 391 (537)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 391 (537)
....-.|.+.++.|.+.. .+.... ..+...+ .++.|.+.||+ ||||.+ +.+.++.++....+.+..
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~-~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~----- 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSL-VGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV----- 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHH-HHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC-----
Confidence 344456777888777632 222222 2333333 88999999998 788875 455555555544443321
Q ss_pred cccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc------
Q psy4866 392 LQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG------ 465 (537)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g------ 465 (537)
+....+......++.+.+. ....+...+++.|.+|+++|+.+.++......+|..+++.+.+.+.+..|
T Consensus 79 ----~~~~l~~l~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~ 153 (356)
T TIGR00901 79 ----PSTDLPLLAGLAFLIAFFS-ATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLI 153 (356)
T ss_pred ----cchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 0012222222222333333 33344556889999999999999999999999999999999999988888
Q ss_pred --cchhhhHhhHHHHHHHHHHHhhccCC
Q psy4866 466 --MYSNFLFGGVSSLVCTVYLYYFLLET 491 (537)
Q Consensus 466 --~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (537)
|+..|++.++..++..+..++..+|.
T Consensus 154 ~~wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 154 TLWGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 88888888777766555544445554
No 220
>KOG3764|consensus
Probab=98.93 E-value=2.6e-09 Score=98.27 Aligned_cols=145 Identities=14% Similarity=0.037 Sum_probs=120.8
Q ss_pred ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHh
Q psy4866 336 PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFN 415 (537)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (537)
..++.+...++.+++.+++.|.+.||+|+|..+++|+..+....+++++. ...+..+++=.+-+.+.+
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg------------~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG------------NSYPMLFVARSLQGVGSA 174 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc------------chhHHHHHHHHHhhhhHH
Confidence 34577778899999999999999999999999999999999999998884 344555555556666665
Q ss_pred hccccchhhhccccCCccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCC
Q psy4866 416 LGFGPLFTPLLSEYFSSNM-KAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKG 493 (537)
Q Consensus 416 ~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (537)
+.. ....+++++.+|.+. |++++|+.-.+..+|-.++|.++|.+++..|++.+|+++++++++-..+.++.++.++.
T Consensus 175 ~~~-tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 175 FAD-TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred HHH-hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 544 345589999999875 69999999999999999999999999999999999999999999988887666654443
No 221
>PRK09848 glucuronide transporter; Provisional
Probab=98.92 E-value=6.6e-08 Score=96.91 Aligned_cols=125 Identities=14% Similarity=0.094 Sum_probs=98.5
Q ss_pred HHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHH
Q psy4866 89 LEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR--SVLGLYVMRTL 166 (537)
Q Consensus 89 ~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l 166 (537)
.|.+.++ .+|.+....++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++
T Consensus 251 ~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l 328 (448)
T PRK09848 251 SLFYVRY--VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAI 328 (448)
T ss_pred heeeEee--ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHH
Confidence 4444442 4666555445555555677888999999999999999999999999888887777654 67777778889
Q ss_pred HHhHhhhhhhhhhhhhhccCCCc-------ccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 167 QGFSMAAIYVISPMYLGEISETS-------IRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 167 ~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
.|+|.+...+...++..|..|.+ ++|...++.+....+|..+++.+.+.
T Consensus 329 ~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 329 ASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988654 35889999999999999888777654
No 222
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.92 E-value=3.6e-08 Score=94.77 Aligned_cols=173 Identities=12% Similarity=0.067 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-C-hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHH
Q psy4866 302 FVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-P-SDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFS 379 (537)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 379 (537)
.++++...++..+= ....+-.|.+.++.+.+. + .+.+...+..+..+..+++|+++||+|.|+.+..+.+...+..
T Consensus 29 ~~~lC~fGF~~e~R--~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 29 VLYLCFYGFMAQFR--PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHHHHhh--chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 34444444444432 234445566666777764 3 4577788889999999999999999999999999999988888
Q ss_pred HHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 380 FIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFL 459 (537)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 459 (537)
+++++. .+.....+.-+++|.+-+..+ ....++...+|+++|+++.|+.+....+|.++++++.+.
T Consensus 107 ~L~~fa------------~Sl~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 107 LLLLLG------------TSVWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL 172 (511)
T ss_pred HHHHHH------------HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888774 233445556666777766655 455899999999999999999999999999999999999
Q ss_pred HHHhhccchhhh---HhhHHHHHHHHHHHhhccCCC
Q psy4866 460 MDKHIGMYSNFL---FGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 460 l~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 492 (537)
....||+.... +..+...++.+ ..+++|..+
T Consensus 173 -l~s~gWr~y~~Ln~Isl~s~~~a~~-~a~~LP~~~ 206 (511)
T TIGR00806 173 -LVTLGWISYSTLNIISLVFMTFSVF-LALFLKRPK 206 (511)
T ss_pred -HHhcCchhHHHHHHHHHHHHHHHHH-HHHhCCCCc
Confidence 55668775332 22223333333 335666433
No 223
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.91 E-value=1.4e-08 Score=105.03 Aligned_cols=184 Identities=16% Similarity=0.157 Sum_probs=121.8
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHH
Q psy4866 306 AFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGL 384 (537)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 384 (537)
..+..+.+.........-++.+-++.+.+. +.+++...+.++.+++.++.+++.||.+||+.+.++.++.+++.++.++
T Consensus 38 ~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~al 117 (633)
T TIGR00805 38 LTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSL 117 (633)
T ss_pred HHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhC
Confidence 333344433333444445566655666553 4557777888999999999999999999999999999999999888776
Q ss_pred HHHhhhccccC------------------------------------Cc--ccch-hhHHHHHHHHHHHhhccccchhhh
Q psy4866 385 YYYVTIELQYE------------------------------------IP--YTSW-VPFLSISLLGVFFNLGFGPLFTPL 425 (537)
Q Consensus 385 ~~~~~~~~~~~------------------------------------~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 425 (537)
..........+ .. ...+ ..++.-++.|.+.+ ...++..++
T Consensus 118 phf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~-~~~~~~~~~ 196 (633)
T TIGR00805 118 PHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT-PIFPLGISY 196 (633)
T ss_pred hHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC-cchhcCchh
Confidence 53211000000 00 0112 22334444444443 344566799
Q ss_pred ccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh----------------------ccchhhhHhhHHHHHHHHH
Q psy4866 426 LSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI----------------------GMYSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 426 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------------------g~~~~~~~~~~~~~~~~~~ 483 (537)
+.|.+|++.|+...|+.+....+|..+++.+.+.+.+.+ +|+..|++.+++.++..+.
T Consensus 197 i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 197 IDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred hhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887643 1455577766666665554
Q ss_pred HHhhccCC
Q psy4866 484 LYYFLLET 491 (537)
Q Consensus 484 ~~~~~~~~ 491 (537)
. +++|++
T Consensus 277 l-~~~p~~ 283 (633)
T TIGR00805 277 F-FFFPKA 283 (633)
T ss_pred H-HhCccc
Confidence 3 444443
No 224
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.89 E-value=5.2e-08 Score=93.01 Aligned_cols=163 Identities=16% Similarity=0.187 Sum_probs=124.7
Q ss_pred hhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy4866 74 AAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMY 153 (537)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~ 153 (537)
..+.+.++.. .......+-+ +-+.++...|.+.+...+.-++...+..++.+|+|.|+.++++..++++=.+++++
T Consensus 233 ~~~Y~vfdqq-f~~y~~~~f~---~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~ 308 (412)
T PF01306_consen 233 AAIYDVFDQQ-FPIYFASFFQ---SAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGF 308 (412)
T ss_dssp HHHHHHHHHH-HHHHHHHTSS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-HHHHHHHHhc---ccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhh
Confidence 3455555554 2222233333 33445567899999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhH-hHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHH
Q psy4866 154 SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTL-FQISCHLGILYTYVLGSE----LSYMNYLTYSLII 228 (537)
Q Consensus 154 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~i~~~l~~~----~~wr~~~~~~~~~ 228 (537)
+++.+.+.+.+.+.|+-.+........++++.+|++-.++...+ .+.+..+|..+.+.+++. +|.+..|++.+.+
T Consensus 309 ~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~i 388 (412)
T PF01306_consen 309 ATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLI 388 (412)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHH
Confidence 99999999999999999999999999999999998876666666 467778888777766655 4888889888887
Q ss_pred HHHHHHH-hhccc
Q psy4866 229 PIIFTVT-FMFMP 240 (537)
Q Consensus 229 ~~~~~~~-~~~~~ 240 (537)
.++..++ .+.++
T Consensus 389 v~~~~li~~f~l~ 401 (412)
T PF01306_consen 389 VLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHS-
T ss_pred HHHHHHHheeeec
Confidence 7665544 44443
No 225
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.89 E-value=4.4e-08 Score=93.04 Aligned_cols=151 Identities=19% Similarity=0.283 Sum_probs=123.0
Q ss_pred hhhhhccchhhHHhhhcCCCCCCCCC--ChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Q psy4866 78 TGMSFAWSAPVLEELLSKESPIPMSP--NEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR 155 (537)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~ 155 (537)
..++.....+..+.+.. +++.+. .+.++..+.+.++..++.++.|.++||+|||+.+..+.....++.+++++..
T Consensus 14 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T COG0477 14 LGLDLGLLSPALPLLLS---TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP 90 (338)
T ss_pred HHHhcchHHHHHHHHHH---HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc
Confidence 33566666777777777 666565 4789999999999999999999999999999998888877667777777777
Q ss_pred h--HHHHHHHHHHHHhHhhhhhhhhhhhhhccCCC-cccchhhhHhHH-HHHHHHHHHHHHhhhh------hHHHHHHHH
Q psy4866 156 S--VLGLYVMRTLQGFSMAAIYVISPMYLGEISET-SIRGTIGTLFQI-SCHLGILYTYVLGSEL------SYMNYLTYS 225 (537)
Q Consensus 156 ~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~i~~~l~~~~------~wr~~~~~~ 225 (537)
+ .+.+++.|+++|++.+...+...+++.|++|+ ++|+...+.... ...+|.++++.++..+ +||..|...
T Consensus 91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T COG0477 91 NVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLA 170 (338)
T ss_pred cchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 6 89999999999999999999999999999987 678888888887 5778888888666543 688866666
Q ss_pred HHHHHH
Q psy4866 226 LIIPII 231 (537)
Q Consensus 226 ~~~~~~ 231 (537)
......
T Consensus 171 ~~~~~~ 176 (338)
T COG0477 171 ALLGLL 176 (338)
T ss_pred HHHHHH
Confidence 555543
No 226
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.88 E-value=6.1e-08 Score=95.18 Aligned_cols=130 Identities=16% Similarity=0.082 Sum_probs=105.2
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVI 177 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 177 (537)
.+|.++.+.|++.+.+.++..+++++.+++.||+++|+++..+.. .++..++.++.++++..++.-++.|++.+...+.
T Consensus 235 ~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~ 313 (393)
T PRK11195 235 ALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVP 313 (393)
T ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhh
Confidence 689999999999999999999999999999999999988888754 4455555666778887788888999999888888
Q ss_pred hhhhhhccCCCcc-cchhhhHhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHH
Q psy4866 178 SPMYLGEISETSI-RGTIGTLFQISCHLGILYTYVLGSEL-----SYMNYLTYSLII 228 (537)
Q Consensus 178 ~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~i~~~l~~~~-----~wr~~~~~~~~~ 228 (537)
..+.+.+..|++. +|++.++.+....+|..++..+.... .++..+...+.+
T Consensus 314 ~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (393)
T PRK11195 314 MNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLL 370 (393)
T ss_pred HHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 8888888766554 79999999999999998888777653 355555545544
No 227
>KOG0253|consensus
Probab=98.88 E-value=4.6e-08 Score=89.12 Aligned_cols=129 Identities=15% Similarity=0.193 Sum_probs=99.3
Q ss_pred HHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCccc
Q psy4866 112 IIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIR 191 (537)
Q Consensus 112 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 191 (537)
+..+.-.-|.++.+++.||+|||+++....+++++..++...+.+-..+.+.-|..-++.++.+.+.+.|..|.+|..-|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhh
Confidence 34466778999999999999999999999999999988887766443333333333444556677889999999999999
Q ss_pred chhhhHhHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHHHHHhhccc
Q psy4866 192 GTIGTLFQISCHLGILYTYVLGSEL--SYMNYLTYSLIIPIIFTVTFMFMP 240 (537)
Q Consensus 192 ~~~~~~~~~~~~~G~~i~~~l~~~~--~wr~~~~~~~~~~~~~~~~~~~~~ 240 (537)
+...|......-+|.++.|+++-.. +-..+..+.+...++..+..+++|
T Consensus 469 atgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeee
Confidence 9999999999999999999998332 223355555666666667777776
No 228
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.87 E-value=1.9e-07 Score=88.72 Aligned_cols=128 Identities=16% Similarity=0.121 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccC
Q psy4866 107 SWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEIS 186 (537)
Q Consensus 107 ~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 186 (537)
+.+.-+-.+...+..+.+.+..+|+..+.=+.+..++..+|.++.++++|.+.-+++-.+.+++.|........+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 44555555666777777888899887544445556677788899999999999999999999999999888888744 55
Q ss_pred CCcccchhhhHhHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 187 ETSIRGTIGTLFQISCHLGILYTYVLGSE-----LSYMNYLTYSLIIPIIFTVTFMFM 239 (537)
Q Consensus 187 ~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-----~~wr~~~~~~~~~~~~~~~~~~~~ 239 (537)
++ ...+-+..|.+.++++|+..-.. ++-|..+.+...+.++..+.++++
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 54 35677777777777777654322 244777887777776665555443
No 229
>KOG4332|consensus
Probab=98.86 E-value=5.2e-08 Score=84.63 Aligned_cols=354 Identities=11% Similarity=0.087 Sum_probs=182.3
Q ss_pred hhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy4866 86 APVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRT 165 (537)
Q Consensus 86 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~ 165 (537)
.|.+-.+-+ .++....++|.+.-+..-...+...+.|.++|+.|||+.-+.-++.+.+++ ++-.++.|-.++++|.
T Consensus 57 gPYvYyLYs---tYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~ 132 (454)
T KOG4332|consen 57 GPYVYYLYS---TYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRV 132 (454)
T ss_pred Cceeeeeeh---hcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhh
Confidence 344444445 788889999998888888888899999999999999997665555554443 3345678999999999
Q ss_pred HHHhHhhhhhhhhhhh-hhccCCCcccchhhhHhHH----HHHHHH----HHHHHHhhhh------hHHHHHHHHHHHHH
Q psy4866 166 LQGFSMAAIYVISPMY-LGEISETSIRGTIGTLFQI----SCHLGI----LYTYVLGSEL------SYMNYLTYSLIIPI 230 (537)
Q Consensus 166 l~G~~~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~~----~~~~G~----~i~~~l~~~~------~wr~~~~~~~~~~~ 230 (537)
+-|++.+..+.+.-++ +.|... +|+.---+... +..+|. +++.+.+..+ |--.+|-..+.+..
T Consensus 133 LGGiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLa 210 (454)
T KOG4332|consen 133 LGGIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLA 210 (454)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH
Confidence 9999999988877665 566542 33332222211 111222 2333333221 22344544443333
Q ss_pred HHHHHhhcccCChHHHHHhCCHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHH
Q psy4866 231 IFTVTFMFMPESPYFYAIKNQEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAV 310 (537)
Q Consensus 231 ~~~~~~~~~~esp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (537)
+...+.+- .|-..-+++.|.++.+... +...+.+..+. +..+...+..
T Consensus 211 igmAvil~-----~W~ENygdps~~kdlltqf------------------------~gaa~aiaSD~---ki~LLG~iqs 258 (454)
T KOG4332|consen 211 IGMAVILS-----SWSENYGDPSENKDLLTQF------------------------KGAARAIASDE---KIALLGAIQS 258 (454)
T ss_pred HHHHHHHh-----hhhhccCChhhhHHHHHHh------------------------hHhHHHHhcch---HHHHHHHHHH
Confidence 32222111 1111112221211111111 11111111111 1122233333
Q ss_pred HHHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCc--HHHHHhhHHHHHHHHHHHHHHHh
Q psy4866 311 FRAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRR--VLFLVSSAGCSLFSFIAGLYYYV 388 (537)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 388 (537)
.+....+..+..|.|.+-. .......+.++.-+.+..++|+-+..++..|-..| ..+.+.+.+..+.+.+.......
T Consensus 259 LFE~smytFVFLWTPaLsp-n~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~v 337 (454)
T KOG4332|consen 259 LFEGSMYTFVFLWTPALSP-NDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSV 337 (454)
T ss_pred HHhhhhheeeeeecccCCC-CcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 3333333444445554321 11112445666667777788887777665554333 34444444444444443333222
Q ss_pred hhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q psy4866 389 TIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYS 468 (537)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 468 (537)
.. ........++..+++-...+..+.+++ -+-.+..|.+.|++.+-+...--++...++-+....-....+-+.
T Consensus 338 sP-----~kes~~~s~i~F~~~E~cvGlfwPSim-kmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~ 411 (454)
T KOG4332|consen 338 SP-----SKESPSESLIGFCLFEACVGLFWPSIM-KMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRN 411 (454)
T ss_pred CC-----CcCCchHHHHHHHHHHHHHhhcchHHH-HHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccch
Confidence 21 112334446667777777777665554 677888899988876655544333333322211100001124446
Q ss_pred hhhHhhHHHHHHHHHH
Q psy4866 469 NFLFGGVSSLVCTVYL 484 (537)
Q Consensus 469 ~~~~~~~~~~~~~~~~ 484 (537)
.|-++.++..++.+..
T Consensus 412 mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 412 MFGICSAFLFVASILQ 427 (454)
T ss_pred hhhhhHHHHHHHHHHH
Confidence 6777766666655443
No 230
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.86 E-value=4e-08 Score=95.31 Aligned_cols=127 Identities=10% Similarity=0.062 Sum_probs=100.3
Q ss_pred hhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q psy4866 86 APVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRI-GRKWSLLMTGPITTASWIIAMYSRSVLGLYVMR 164 (537)
Q Consensus 86 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r 164 (537)
...+|.+.+ +.|.+..+.+.+.+.+.++..++.++.|++.||+ +||+.+.++.++.+++.++..+.++..... .-
T Consensus 217 ~~~lp~~~~---~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (355)
T TIGR00896 217 IGWLPAILI---SHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WA 292 (355)
T ss_pred HHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HH
Confidence 345677777 7799999999999999999999999999999999 567777788888888877777665433332 45
Q ss_pred HHHHhHhhhhhhhhhhhhhccCC-CcccchhhhHhHHHHHHHHHHHHHHhhhh
Q psy4866 165 TLQGFSMAAIYVISPMYLGEISE-TSIRGTIGTLFQISCHLGILYTYVLGSEL 216 (537)
Q Consensus 165 ~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~l~~~~ 216 (537)
++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999988887777765554 45678888888888888888888777654
No 231
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.85 E-value=1.8e-05 Score=77.83 Aligned_cols=126 Identities=5% Similarity=0.047 Sum_probs=92.5
Q ss_pred hHHhhhcCCCCCCC-----CCChhhHHHHHHHHHHhhh-hhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH----h--
Q psy4866 88 VLEELLSKESPIPM-----SPNEGSWVVAIIEIGNYLS-PIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS----R-- 155 (537)
Q Consensus 88 ~~~~~~~~~~~~~~-----s~~~~~~~~s~~~~~~~~~-~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~----~-- 155 (537)
++-.+.+ .+.+ +...+.++-+...+..++. .++.+++++|++|++++-+....+....+++++. +
T Consensus 25 iLR~lKD---~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~ 101 (472)
T TIGR00769 25 ILRDTKD---TLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDL 101 (472)
T ss_pred HHHhhhh---heeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 3445555 5555 3357899999888877776 8999999999999999888777776666665554 0
Q ss_pred -------------------------hHHHHHHHHHHHHhHhhhhhh-hhhhhhhccCCCcccchhhhHhHHHHHHHHHHH
Q psy4866 156 -------------------------SVLGLYVMRTLQGFSMAAIYV-ISPMYLGEISETSIRGTIGTLFQISCHLGILYT 209 (537)
Q Consensus 156 -------------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~ 209 (537)
+.|...+.-+...+-...... .-..+++|.+..++-.|..++++.+.++|.+++
T Consensus 102 ~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~s 181 (472)
T TIGR00769 102 LHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFS 181 (472)
T ss_pred cCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444444444444444 677889999999999999999999999999999
Q ss_pred HHHhhhh
Q psy4866 210 YVLGSEL 216 (537)
Q Consensus 210 ~~l~~~~ 216 (537)
+.+..++
T Consensus 182 g~~~~~~ 188 (472)
T TIGR00769 182 GRTIKYF 188 (472)
T ss_pred HHHHHHH
Confidence 9887664
No 232
>PRK10133 L-fucose transporter; Provisional
Probab=98.83 E-value=1.2e-07 Score=94.20 Aligned_cols=135 Identities=4% Similarity=-0.117 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
......+.|.+.++.+.+. +.+.....+.++..++.++.|++.||+|||+.+..+..+..++.+++.....
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~-------- 113 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE-------- 113 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 4566677788766666653 4457778889999999999999999999999999999998888876532110
Q ss_pred CcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 396 IPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMD 461 (537)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 461 (537)
.++.+..++..++.+.+.+..... ...++.+..|++.++..+++.+....+|..+++.+.+.+.
T Consensus 114 -a~~~~~ll~~r~l~G~g~g~~~~~-~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 114 -IMNYTLFLVGLFIIAAGLGCLETA-ANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred -cCCHHHHHHHHHHHHHHHHHHHhh-HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123444555556666666654433 4467777766666666799999999999999998876554
No 233
>KOG2532|consensus
Probab=98.81 E-value=4.3e-08 Score=96.57 Aligned_cols=144 Identities=17% Similarity=0.237 Sum_probs=119.4
Q ss_pred hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhh
Q psy4866 337 SDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNL 416 (537)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (537)
.+++......+.+++.+.+|++.||+|.|+++..+.++.+++.++..+... ...+..++.=++.|.+.+.
T Consensus 75 k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~----------~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 75 KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS----------IGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH----------hcchhhHHHHHHhHHHHhH
Confidence 446778889999999999999999999999999999999998888877542 2234445555666666666
Q ss_pred ccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh-hccchhhhHhhHHHHHHHHHHHhhccCC
Q psy4866 417 GFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH-IGMYSNFLFGGVSSLVCTVYLYYFLLET 491 (537)
Q Consensus 417 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (537)
.+. ....+..+-.|+++|++..++.....++|.+++-++.|.+.+. .||...|++.+++.++..++.+.+..+.
T Consensus 145 ~~p-a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 145 LFP-AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred HHh-hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 554 4558999999999999999999999999999999999999998 9999999999999988887766665543
No 234
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.77 E-value=3.9e-07 Score=91.88 Aligned_cols=114 Identities=10% Similarity=0.088 Sum_probs=90.0
Q ss_pred CCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHhHhhhhhh
Q psy4866 102 SPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMY-----SRSVLGLYVMRTLQGFSMAAIYV 176 (537)
Q Consensus 102 s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~ 176 (537)
+....+++.+...++..++.+++++++||+|+|+.+.++.++.+++.+...+ .++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777899999999999999999999999888877766655433 34567777788899999999999
Q ss_pred hhhhhhhccCCC-------cccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 177 ISPMYLGEISET-------SIRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 177 ~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
...++++|..+. ++.|..++......-+|..+++.+.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999652 334668888888888888887766654
No 235
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.75 E-value=1.5e-07 Score=93.68 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=109.3
Q ss_pred hhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh--hH
Q psy4866 80 MSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR--SV 157 (537)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~ 157 (537)
..........+.+.++ .++.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+ |.
T Consensus 239 ~~~~~~~~~~~y~~~~--vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTY--VLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSP 315 (428)
T ss_pred hhhhhhhhHHHHHHHH--HhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhH
Confidence 3344444455555552 34433 6778888999999999999999999999999999999999999999988886 99
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhccCCC-------cccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 158 LGLYVMRTLQGFSMAAIYVISPMYLGEISET-------SIRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 158 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
+.+++.-++.|++.+..++...++++|..+. ++.|...+......-+|..+++.+.+.
T Consensus 316 ~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 316 WLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred HHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999998873 334888888888888888888776654
No 236
>KOG0255|consensus
Probab=98.71 E-value=7.6e-08 Score=98.46 Aligned_cols=139 Identities=18% Similarity=0.148 Sum_probs=107.9
Q ss_pred hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhh
Q psy4866 337 SDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNL 416 (537)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (537)
......++.++..+|.++.|.++||+|||++++.+.++..++.+..++. .+.+...+.=++.+++. .
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a------------~~~~~~~~~Rfl~G~~~-~ 186 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA------------PNYWMFLIFRFLSGFFG-S 186 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh------------CcHHHHHHHHHHHHhhc-c
Confidence 3366777889999999999999999999999999999999888777663 34444444445555554 4
Q ss_pred ccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 417 GFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 417 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
+...+.+.+..|.+++++|+.+..+ ......++.+++...+++.. +|++.+++.....++..++ +++.+|.+
T Consensus 187 ~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 187 GPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred chhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 4455677999999999999999999 88888899999999988887 7888888777777666555 34444543
No 237
>KOG2533|consensus
Probab=98.64 E-value=2.6e-07 Score=91.30 Aligned_cols=144 Identities=17% Similarity=0.224 Sum_probs=111.4
Q ss_pred hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhh
Q psy4866 337 SDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNL 416 (537)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (537)
-+....++.++.+++.+.++.+.||++-.+.+....++.++..++-... ++.+..++.-++.|.+-+.
T Consensus 83 l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~------------~s~~~~ialr~llGl~es~ 150 (495)
T KOG2533|consen 83 LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV------------HSFPGLIALRFLLGLFESG 150 (495)
T ss_pred hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH------------hhhHHHHHHHHHHHHHhcc
Confidence 3366778899999999999999999995555544444433333222221 3455566667778888777
Q ss_pred ccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHH------HhhccchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 417 GFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMD------KHIGMYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 417 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
++++. ..++...+.+++|+..+|+.+...++|+++++.+...+. ...||++.|++-+++.++..+++++++|+
T Consensus 151 ~wP~~-~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 151 GWPGV-VAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred cchHH-HHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 77554 489999999999999999999999999999999988764 34689999999999999999988888887
Q ss_pred CCC
Q psy4866 491 TKG 493 (537)
Q Consensus 491 ~~~ 493 (537)
...
T Consensus 230 ~P~ 232 (495)
T KOG2533|consen 230 NPS 232 (495)
T ss_pred Chh
Confidence 554
No 238
>KOG3574|consensus
Probab=98.64 E-value=8.4e-06 Score=74.94 Aligned_cols=136 Identities=14% Similarity=0.094 Sum_probs=91.2
Q ss_pred HHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhh-----hhhhhHHHHH-HHHHHH
Q psy4866 72 CIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVN-----RIGRKWSLLM-TGPITT 145 (537)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~-~~~l~~ 145 (537)
.+.....|.-.+... .+|.+.+ .-|.|.++.+...-++. -..--++|.++.| |+||||.-++ ...+.+
T Consensus 37 l~LYllQGiP~GL~~-~iP~lL~---ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG 110 (510)
T KOG3574|consen 37 LFLYLLQGIPLGLIG-AIPLLLQ---AKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLG 110 (510)
T ss_pred HHHHHHcCCchhHhh-hhHHHhc---CCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHHHHH
Confidence 344667888888888 8899998 78888887665433321 1234568889999 9999875333 222222
Q ss_pred HHHHHHHH-----------HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh
Q psy4866 146 ASWIIAMY-----------SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG 213 (537)
Q Consensus 146 ~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~ 213 (537)
....+.+. .++...+....++.-+.++.--.+.-.+.-.+..+++-|.+......+...|.+++..+-
T Consensus 111 ~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 111 LFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 22222222 123333444556666777777777778888888889999999999999999998886553
No 239
>KOG3810|consensus
Probab=98.63 E-value=1.7e-06 Score=78.34 Aligned_cols=360 Identities=15% Similarity=0.138 Sum_probs=212.4
Q ss_pred CCCCCCChhh-HHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhh
Q psy4866 98 PIPMSPNEGS-WVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYV 176 (537)
Q Consensus 98 ~~~~s~~~~~-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 176 (537)
+.+++..|+. -+.-...-.+.+.-.+.=.+.|-.-.|+++++-.+.......+.-+.++.+.+=+.-++-|...+ ...
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEI 113 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEI 113 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHH
Confidence 5566655542 22233334455555666678999999999999888888888888999999999999999999865 457
Q ss_pred hhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHHHHHHhhcccCChHHHHHhC
Q psy4866 177 ISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL------SYMNYLTYSLIIPIIFTVTFMFMPESPYFYAIKN 250 (537)
Q Consensus 177 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~------~wr~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~ 250 (537)
+.++++-+.++++++.++.+...+..-.|...|..++..+ +....-.+......+..+..+++|..+|-+.-+.
T Consensus 114 AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~ 193 (433)
T KOG3810|consen 114 AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHR 193 (433)
T ss_pred hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhc
Confidence 7899999999999999999999888888888888777663 3444444444444455666677776654443333
Q ss_pred CHHHHHHHHHhhcCCChhhHHHHHHHHHHhhhhcccccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Q psy4866 251 QEGKAIESLKWLRNKTADQVQSELQIIKQNTSKNVERTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFAS 330 (537)
Q Consensus 251 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (537)
+.++.. .....+.+ .+.+.....+.. ...-...+.+..+ ++.++...++.....++++-+..|...+.+.
T Consensus 194 ~~~~~~--v~~~e~~~---~~~~~~~~l~~~-~~~l~~~l~~~y~----np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~ 263 (433)
T KOG3810|consen 194 LEDKIS--VGDLEEMN---PQASYMSYLRGA-FVLLWRDLQECYS----NPRLLKWSLWWALASCGYYQVTNYTQILWKE 263 (433)
T ss_pred ccccce--eccchhcC---ccchhhHHHHHH-HHHHHHHHHHHhc----CchhhhhHHHHHHhhchhHHHHHHHHHHHHh
Confidence 322110 00000000 000000000000 0000112222222 2234444555555666788888888888777
Q ss_pred cCCCCCh---hHHHHHHHHHHHHHhhhHhhhhcccCCcHH--HHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHH
Q psy4866 331 SETFLPS---DYISILFAIILLVSIFPSTYYIDRAGRRVL--FLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFL 405 (537)
Q Consensus 331 ~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (537)
....... +..=.+..+.++++.+..|++.-.+.|..- +.++.+..+...+.+.. ..+.|+...
T Consensus 264 ~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~------------t~~Iw~~Ya 331 (433)
T KOG3810|consen 264 VAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQ------------TQHIWVCYA 331 (433)
T ss_pred hCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhc------------ccceehhhh
Confidence 6432111 133344566777888888988666655532 23333333322222221 345677777
Q ss_pred HHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc-----------cchhhhHhh
Q psy4866 406 SISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG-----------MYSNFLFGG 474 (537)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-----------~~~~~~~~~ 474 (537)
...++...+.+.. ++....+++....+.-|..+|+..++.-+-..+...+. .|..| +..-|.+.+
T Consensus 332 ~yvlfr~~y~l~i-tiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iV---vd~~g~~L~ir~Q~~~Y~~Yf~v~~ 407 (433)
T KOG3810|consen 332 GYVLFRVIYQLTI-TIATFQIARNLSSELFGLVFGINTFVALILQSILTLIV---VDDRGLGLDIRTQFVVYSSYFIVLG 407 (433)
T ss_pred hHHHHHhhHhhhh-hHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEEE---EcccccCCCcceeEEEEeehHHHHH
Confidence 7777777776654 34445555656777789999988877655554444332 23222 222366666
Q ss_pred HHHHHHHHHH
Q psy4866 475 VSSLVCTVYL 484 (537)
Q Consensus 475 ~~~~~~~~~~ 484 (537)
++.+++....
T Consensus 408 ~i~~~~~~~~ 417 (433)
T KOG3810|consen 408 VIFLIGFGIE 417 (433)
T ss_pred HHHHHHHHHH
Confidence 6666665543
No 240
>PRK09669 putative symporter YagG; Provisional
Probab=98.63 E-value=2.3e-06 Score=85.69 Aligned_cols=111 Identities=9% Similarity=0.076 Sum_probs=86.0
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHhHhhhhhhhhhhhh
Q psy4866 105 EGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMY--SRSVLGLYVMRTLQGFSMAAIYVISPMYL 182 (537)
Q Consensus 105 ~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 182 (537)
..+.+.....++..++.+++++++||+|+|+.+.++.++.++..+...+ .++.+.+++..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666777888889999999999999999999888766654443333 34777788888999999999999999999
Q ss_pred hccCCC-------cccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 183 GEISET-------SIRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 183 ~~~~~~-------~~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
+|..+. ++.|...+.......+|..+++.+++.
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998852 223667788887888888888777654
No 241
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.63 E-value=0.00012 Score=71.11 Aligned_cols=128 Identities=16% Similarity=0.066 Sum_probs=77.0
Q ss_pred HHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCccc
Q psy4866 321 IAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYT 399 (537)
Q Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (537)
...+..|+...|.+. ..+..-....+.++.++++..++.+|+|..+.-.++......++.+.....+... .+
T Consensus 278 ~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~-------~~ 350 (432)
T PF06963_consen 278 GGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPG-------SP 350 (432)
T ss_pred cHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCC-------CC
Confidence 334455666667752 2234555567778899999999999999888877776665555444433332222 11
Q ss_pred -chhhH----HHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHH
Q psy4866 400 -SWVPF----LSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKL 456 (537)
Q Consensus 400 -~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 456 (537)
..... ..+.+--.+. -++-....-++.|..|+++||+..|+-+...++...+.-.+
T Consensus 351 ~~~~s~~~l~~gi~~SR~GL-W~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGL-WSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred chhhHHHHHHHHHHHHHHHH-HhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 11111 1111111111 12222234678899999999999999999888877665443
No 242
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.60 E-value=1.4e-07 Score=67.56 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=73.5
Q ss_pred hhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHH
Q psy4866 79 GMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVL 158 (537)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~ 158 (537)
|+....++|++|.+++ |.++|.++.|++.+..++|+.+|.+...++.++..+++.+..++++..+..+.+++.++++
T Consensus 5 GigRFayTplLP~M~~---~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQA---DGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhHHHHHHhHhHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 4555678999999999 9999999999999999999999999999999999999999999999999999999999877
Q ss_pred HHH
Q psy4866 159 GLY 161 (537)
Q Consensus 159 ~l~ 161 (537)
...
T Consensus 82 ~w~ 84 (85)
T PF06779_consen 82 LWS 84 (85)
T ss_pred HHh
Confidence 653
No 243
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.60 E-value=3.5e-07 Score=87.70 Aligned_cols=139 Identities=14% Similarity=0.153 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHhhhHhhhhccc-CCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhc
Q psy4866 339 YISILFAIILLVSIFPSTYYIDRA-GRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLG 417 (537)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (537)
.....+....-+..+++||++||+ |+|+.+..+.++..++.++++... ........+.+.++..+.+.
T Consensus 65 ~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~----------~~~~~gl~i~L~~I~iG~Gl- 133 (498)
T COG3104 65 GLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS----------VSGPGGLYIGLALIIVGTGL- 133 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc----------cccccHHHHHHHHHHhcccc-
Confidence 444455555557778899999995 999999999999999999887631 01234455555666655544
Q ss_pred cccchhhhccccCCcc--ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhc
Q psy4866 418 FGPLFTPLLSEYFSSN--MKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFL 488 (537)
Q Consensus 418 ~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 488 (537)
+-+...+++.|++|++ +|-.++++.++..++|+.++|.+.+++.++.||...|...++-..++.+..++..
T Consensus 134 ~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 134 FKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred ccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4445558999998764 4677888899999999999999999999999999999988888888877665443
No 244
>KOG0254|consensus
Probab=98.56 E-value=1e-06 Score=89.76 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhc
Q psy4866 338 DYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLG 417 (537)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (537)
++......++..++.++.|+++|++|||+.++.+.+...++.++.+.. .+.....+.=++.+.+.+..
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a------------~~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA------------PSWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh------------hhHHHHHHHHHHhccchhhh
Confidence 577888899999999999999999999999999999999999888874 34455666666777766665
Q ss_pred cccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhh--ccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 418 FGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHI--GMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 418 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
.... ..+.+|..|++.||...+..+....+|..++ .+.+....+. +|+..+.+..+.+++..+. .++.||..
T Consensus 160 ~~~~-piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 160 SVLA-PVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred hhcc-hhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 5444 4899999999999999999999988887777 5566665543 7887776666666666655 56677643
No 245
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.56 E-value=7.8e-07 Score=89.13 Aligned_cols=119 Identities=12% Similarity=0.068 Sum_probs=104.5
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHH----------HhhHHHHHHHHHHH
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMY----------SRSVLGLYVMRTLQ 167 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~----------~~~~~~l~~~r~l~ 167 (537)
.+|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+.... .++.+.++..-++.
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 78999999999999999999999999999999999999999999999888765431 13444556678899
Q ss_pred HhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh
Q psy4866 168 GFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL 216 (537)
Q Consensus 168 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~ 216 (537)
+++.+..+.....++.+.+|++++|...++.+...++|..+++.+++.+
T Consensus 362 ~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 362 EVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred HHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999877653
No 246
>KOG3762|consensus
Probab=98.55 E-value=1.1e-07 Score=91.30 Aligned_cols=162 Identities=17% Similarity=0.120 Sum_probs=130.1
Q ss_pred hhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 75 AFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS 154 (537)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~ 154 (537)
.++.|...+.....+--..+ |.+-.+.-.|.....-..|-.+.-++.+++..++|+-+++.+++.++++=.+..++.
T Consensus 380 av~mG~g~~lv~tFLfWHle---d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L 456 (618)
T KOG3762|consen 380 AVVMGAGVGLVFTFLFWHLE---DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL 456 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHh---hcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh
Confidence 33444445544444445556 788788888888888888889999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHH-----HHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q psy4866 155 RSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQI-----SCHLGILYTYVLGSELSYMNYLTYSLIIP 229 (537)
Q Consensus 155 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-----~~~~G~~i~~~l~~~~~wr~~~~~~~~~~ 229 (537)
+|.|+.+...+++|+..+..+....+|++...||+-|..+.++.+. +-++|.+||..+...++-|..|.+.++.+
T Consensus 457 ~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAc 536 (618)
T KOG3762|consen 457 QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIAC 536 (618)
T ss_pred cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888644 33455555554444568889999988888
Q ss_pred HHHHHHhhcc
Q psy4866 230 IIFTVTFMFM 239 (537)
Q Consensus 230 ~~~~~~~~~~ 239 (537)
++.++....+
T Consensus 537 l~~l~~~~~i 546 (618)
T KOG3762|consen 537 LVTLALFISI 546 (618)
T ss_pred HHHHHHHHHh
Confidence 7766554443
No 247
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.54 E-value=2.7e-06 Score=78.13 Aligned_cols=166 Identities=11% Similarity=0.090 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhh-hhHHHHHH
Q psy4866 62 FLFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIG-RKWSLLMT 140 (537)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~l~~~ 140 (537)
...|.+.+...+-.+..... ..=+|.+.. |-|+|..+.|++.+...+.....++....+.+|.. +|+..+..
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~----~~WLP~ili---~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~ 280 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIV----IGWLPAILI---DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLA 280 (395)
T ss_pred chhHHHHHHHHhhHHHHHHH----HHHHHHHHH---HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 34555555554444433333 333678888 89999999999999999999999999999999754 78888888
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHH---HHHHHhhhh-
Q psy4866 141 GPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGIL---YTYVLGSEL- 216 (537)
Q Consensus 141 ~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~---i~~~l~~~~- 216 (537)
..++.+|.+.+.+.+.-..++. -++.|+|.|..++.+..++.+..++.++. -.+..+..++|.+ +||.+.+++
T Consensus 281 ~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~A--a~LSgmaQg~GYllAa~GP~l~G~lh 357 (395)
T COG2807 281 LLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIA--AALSGMAQGVGYLLAAFGPWLFGFLH 357 (395)
T ss_pred HHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHH--HHHHHHhhhhhHHHHhhhhhhHhHHH
Confidence 8888888888888775444433 49999999999999999999988655432 2333445555554 467777664
Q ss_pred ----hHHHHHHHHHHHHHHHHHHhh
Q psy4866 217 ----SYMNYLTYSLIIPIIFTVTFM 237 (537)
Q Consensus 217 ----~wr~~~~~~~~~~~~~~~~~~ 237 (537)
+|+..+...+...++..+.-+
T Consensus 358 Da~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 358 DATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HhcCChHHHHHHHHHHHHHHHHHHh
Confidence 799888887777666554433
No 248
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.53 E-value=5.7e-06 Score=80.14 Aligned_cols=127 Identities=11% Similarity=0.117 Sum_probs=100.0
Q ss_pred hhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHH
Q psy4866 86 APVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR--SVLGLYVM 163 (537)
Q Consensus 86 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~ 163 (537)
+.+...+.+. -+|.++.+..+.......+..++.+++.++++|+|+|+++.++.++.+++.++.-+.+ +.+.+++.
T Consensus 256 ~s~~~yy~~y--~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~ 333 (467)
T COG2211 256 GSIMVYYVTY--VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVA 333 (467)
T ss_pred hhhhheeEEE--EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHH
Confidence 3344444442 4565666677888888888888899999999999999999999999999999988877 78888999
Q ss_pred HHHHHhHhhhhhhhhhhhhhccCCC-------cccchhhhHhHHHHHHHHHHHHHHhh
Q psy4866 164 RTLQGFSMAAIYVISPMYLGEISET-------SIRGTIGTLFQISCHLGILYTYVLGS 214 (537)
Q Consensus 164 r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~i~~~l~~ 214 (537)
.++.++|.+...+...++++|..+- +.-|...+......=+|..++..+.+
T Consensus 334 ~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g 391 (467)
T COG2211 334 LIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPG 391 (467)
T ss_pred HHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987652 22367777777666667666654443
No 249
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.51 E-value=1.7e-06 Score=77.22 Aligned_cols=147 Identities=13% Similarity=-0.020 Sum_probs=96.2
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhcCCCCC-hhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHH
Q psy4866 309 AVFRAFTGVQSIIAYANTIFASSETFLP-SDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYY 387 (537)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (537)
+.....+..+.+..|.|.+.+..+.++. .........++..+ .++.|.+.|++|.+.++.++.+...++...+.....
T Consensus 10 ~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~ 88 (250)
T PF06813_consen 10 WVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVS 88 (250)
T ss_pred HHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333444567888999999888887632 22445555566655 578899999999999999999999998887766542
Q ss_pred hhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4866 388 VTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH 463 (537)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 463 (537)
... +..+.|...+..++.+.+. ..+.........+.+|. +||++.|+.-....+++++-..+...+.+.
T Consensus 89 ~~i-----~~~~~~~~~~~~~l~~~s~-~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 89 GRI-----PSLPVWLMCLFLFLGGNSS-CWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred Ccc-----CccchHHHHHHHHHHcccH-HHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 221 1112222222222222221 22223333445577885 699999999999999999988887776654
No 250
>KOG4686|consensus
Probab=98.51 E-value=2.3e-06 Score=75.34 Aligned_cols=144 Identities=10% Similarity=0.111 Sum_probs=106.6
Q ss_pred hhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHh
Q psy4866 91 ELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITT-ASWIIAMYSRSVLGLYVMRTLQGF 169 (537)
Q Consensus 91 ~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~-~~~~~~~~~~~~~~l~~~r~l~G~ 169 (537)
.+++ .+|+|+...+.+.+.-..-.++.+++.|.++|++|++.+.+.+..+.. ++-....+ +++.=..+..+.|+
T Consensus 290 fF~~---rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGL 364 (459)
T KOG4686|consen 290 FFQK---RFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGL 364 (459)
T ss_pred HHHH---hhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhh
Confidence 4556 899999999999999888899999999999999999987776644443 33333333 33334567788888
Q ss_pred HhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-------hHHH-HHHHHHHHHHHHHHHhhcc
Q psy4866 170 SMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-------SYMN-YLTYSLIIPIIFTVTFMFM 239 (537)
Q Consensus 170 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-------~wr~-~~~~~~~~~~~~~~~~~~~ 239 (537)
..+.........++-..|+++.|.+.+..+...++|..+.+++++.+ .|-- .|...+.+++....+.+.+
T Consensus 365 sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 365 SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 87777666777888889999999999999999999999999998763 3433 4444444555544444443
No 251
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.47 E-value=8.3e-09 Score=103.67 Aligned_cols=143 Identities=17% Similarity=0.240 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhcc
Q psy4866 339 YISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGF 418 (537)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (537)
.......++.++|.++.|+++||+|||+.+..+..+..++.++..+... ..+.+...+.-++.|.+.+...
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPS---------YNNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHhhhccccccccccccccccccccccccccccccccccccccc---------cccccccccccccccccccccc
Confidence 5566778899999999999999999999999999998888877766310 0134455555566666665544
Q ss_pred ccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh---hccchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 419 GPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH---IGMYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 419 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
+....++.|..|++.|+...++.+....+|..++..+.-.+.+. .+|+..+.+..+..++..+ ...+.||..
T Consensus 121 -~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP 195 (451)
T PF00083_consen 121 -VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESP 195 (451)
T ss_pred -cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 44558999999999999999999988888877776654433222 2477666665555554433 335667653
No 252
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.43 E-value=1e-05 Score=66.52 Aligned_cols=128 Identities=20% Similarity=0.291 Sum_probs=99.1
Q ss_pred hhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy4866 86 APVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRT 165 (537)
Q Consensus 86 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~ 165 (537)
.+++..+.++. .-++++..--.-.++.+....+++++.+.+.+++|.|+.+++|.+.+.+-.+ .-+-++.+.++.+-.
T Consensus 20 ~svi~s~~~~~-~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~-~~~~~~~~~l~~~s~ 97 (156)
T PF05978_consen 20 ESVIHSVHERN-PSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIA-SFFYPNSYTLYPASA 97 (156)
T ss_pred HHHHHHHhhcC-cccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHH
Confidence 44444544411 1233443334445666777788889999999999999999999999986543 446678889999999
Q ss_pred HHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 166 LQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 166 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
+.|++.+..++....++.+..++++|++..+++-.....+.++|.++...
T Consensus 98 l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 98 LLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888888888877766543
No 253
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.37 E-value=1.4e-05 Score=74.71 Aligned_cols=134 Identities=7% Similarity=-0.077 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHhcCCC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCc
Q psy4866 319 SIIAYANTIFASSETF-LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIP 397 (537)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (537)
......|.+.+....+ .+++.....+..+..+..+..+++.+|+|.|+-++.+..++++++.++.-... .
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~---------~ 101 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS---------S 101 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh---------h
Confidence 3344556665555555 35667778888899999999999999999999999999999999888753321 1
Q ss_pred ccchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 398 YTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK 462 (537)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 462 (537)
......+..+++.+.+.+..- +..+.++..+.+++....-+.+...+..+|.+++|.+.+++..
T Consensus 102 ~~y~~FL~~lFila~Gi~~Le-taaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 102 KSYGFFLVALFILASGIGLLE-TAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hhHHHHHHHHHHHHhhhHHHH-hccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 223344455555555555433 3345788888888878889999999999999999999999887
No 254
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.36 E-value=3.8e-05 Score=72.43 Aligned_cols=138 Identities=16% Similarity=0.153 Sum_probs=113.3
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhh-hhhhhHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHhHhhh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVN-RIGRKWSLLMTGPITTASWIIAMY---SRSVLGLYVMRTLQGFSMAA 173 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~l~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~ 173 (537)
-||++..|...+......|..++....|++.. |.+.|++-.+++.+.+++..+..+ ..+.+.+...-++.|++.|.
T Consensus 238 Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~ 317 (403)
T PF03209_consen 238 VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGL 317 (403)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhH
Confidence 78999999999999999999999999999888 678888888888887777665444 45788999999999999999
Q ss_pred hhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh--------------hHHHHHHHHHHHHHHHHHH
Q psy4866 174 IYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL--------------SYMNYLTYSLIIPIIFTVT 235 (537)
Q Consensus 174 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~--------------~wr~~~~~~~~~~~~~~~~ 235 (537)
......+...+...+++.|.+++.|+....++..++..+++.. ++-..|.+-++..++.+.+
T Consensus 318 f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 318 FTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred HHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998888887777776552 3555666655555444433
No 255
>PRK11462 putative transporter; Provisional
Probab=98.36 E-value=4.8e-05 Score=76.28 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=75.0
Q ss_pred CChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHhHhhhhhhhhhh
Q psy4866 103 PNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR--SVLGLYVMRTLQGFSMAAIYVISPM 180 (537)
Q Consensus 103 ~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~ 180 (537)
....+++.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++.-++.|++.+...+...+
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456777888899999999999999999999987765554444334333332 2334445556778887777777777
Q ss_pred hhhccCC-------CcccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 181 YLGEISE-------TSIRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 181 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
++.|..+ +++.|...+......-+|..+++.+++.
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~ 383 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGW 383 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887765 2223555566666666666666655543
No 256
>KOG0252|consensus
Probab=98.32 E-value=2e-06 Score=81.18 Aligned_cols=172 Identities=14% Similarity=0.045 Sum_probs=125.0
Q ss_pred HHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhH--------HHH-HHHHHHhhhhhhhHHhhhhhhhhHH
Q psy4866 66 FLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSW--------VVA-IIEIGNYLSPIPAGMLVNRIGRKWS 136 (537)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~--------~~s-~~~~~~~~~~~~~G~l~dr~Grr~~ 136 (537)
.-++..+...|+......-.+.....+.+ ++++.+.+... ... +...++..|..+...+.|+.|||++
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~---~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~i 380 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS---AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYI 380 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH---hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHH
Confidence 56667777777777666666666777777 67766554333 111 2223444577788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHH
Q psy4866 137 LLMTGPITTASWIIAMYSRSV--------LGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILY 208 (537)
Q Consensus 137 l~~~~~l~~~~~~~~~~~~~~--------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i 208 (537)
.+.+.+++.+..+..+...|. ....+..++.-+| .......+-+|.+|.+-|+..-++..+..-+|.++
T Consensus 381 q~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAiv 457 (538)
T KOG0252|consen 381 QLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIV 457 (538)
T ss_pred HHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHHhhhhhhHHHHhccchHHH
Confidence 999999999998888887661 1222233333333 23344556789999999999999999999999998
Q ss_pred HHHHhhh---------hhHHHHHHHHHHHHHHHHHHhhcccCCh
Q psy4866 209 TYVLGSE---------LSYMNYLTYSLIIPIIFTVTFMFMPESP 243 (537)
Q Consensus 209 ~~~l~~~---------~~wr~~~~~~~~~~~~~~~~~~~~~esp 243 (537)
+...-.. .+-|+.+++.+...++..+..+++|||-
T Consensus 458 g~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 458 GAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred HHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeeccc
Confidence 8765533 3678999999999999999999999883
No 257
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.30 E-value=0.0027 Score=63.10 Aligned_cols=115 Identities=11% Similarity=0.087 Sum_probs=77.6
Q ss_pred CCChhhHHHHHHHH-HHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH--h-----------------------
Q psy4866 102 SPNEGSWVVAIIEI-GNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS--R----------------------- 155 (537)
Q Consensus 102 s~~~~~~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~--~----------------------- 155 (537)
+...+.++-....+ ...+...+..++++|++|.+++-+....+.....++++. |
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 44556666554444 445567788999999999998877766666655555542 0
Q ss_pred ------hHHHHHHHHHHHHhHhhhhhh-hhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh
Q psy4866 156 ------SVLGLYVMRTLQGFSMAAIYV-ISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL 216 (537)
Q Consensus 156 ------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~ 216 (537)
+.|.+.+.-++.-+-...... .-..+..|.++.+|-.+..++++.+.++|.++++.+...+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333333333333333333 4577889999999999999999999999999988776554
No 258
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.26 E-value=0.0053 Score=59.39 Aligned_cols=115 Identities=10% Similarity=0.063 Sum_probs=83.1
Q ss_pred CCChhhHHHHHHHH-HHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh-------------------------
Q psy4866 102 SPNEGSWVVAIIEI-GNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR------------------------- 155 (537)
Q Consensus 102 s~~~~~~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~------------------------- 155 (537)
++..+.++-+..-+ +..+..++.+++.+++-|.+++-+-+..+....+++++.-
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45567788777777 6788889999999999999998888777777777776531
Q ss_pred -------hHHHHHHHHHHHHhHhhhhhh-hhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh
Q psy4866 156 -------SVLGLYVMRTLQGFSMAAIYV-ISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL 216 (537)
Q Consensus 156 -------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~ 216 (537)
+.|...+.-++.-+=.+.... .-.....|.+..+|-.|..++++.+.+++.++++.+..++
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 113333333333332233322 4456678999889999999999999999999998887665
No 259
>KOG2816|consensus
Probab=98.21 E-value=2.1e-05 Score=77.36 Aligned_cols=136 Identities=21% Similarity=0.211 Sum_probs=107.1
Q ss_pred HHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchh
Q psy4866 344 FAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFT 423 (537)
Q Consensus 344 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (537)
.++..++.++..|.++|++|||..+......+.+..+.+.+. . |+.++...+.+. +.. .....+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~-------------~-~~~~~~~~l~g~-~~~-~~s~~~ 134 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ-------------G-YWFFLLLGLSGG-FSA-IFSVGF 134 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH-------------H-HHHhhhcccccc-hhh-hhhhhh
Confidence 367788889999999999999999988888777776666552 1 222222222222 222 334456
Q ss_pred hhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCCCC
Q psy4866 424 PLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKGKT 495 (537)
Q Consensus 424 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (537)
+++++....+.|....|+.+.....+..++|.+.+.+....|+...|.+..+..++..+....++||+..++
T Consensus 135 a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 135 AYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred hheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 899999999999999999999999999999999999999999999999999999999888888888876544
No 260
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.15 E-value=0.0001 Score=72.40 Aligned_cols=115 Identities=14% Similarity=0.029 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHhhhHhhhhcccCCc-HHHHHhhHHHHHHHHHHHHHHHhhhccccC-CcccchhhHHHHHHHHHHHhh
Q psy4866 339 YISILFAIILLVSIFPSTYYIDRAGRR-VLFLVSSAGCSLFSFIAGLYYYVTIELQYE-IPYTSWVPFLSISLLGVFFNL 416 (537)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (537)
.....+.++..+|+.+..+.. +-++| +.+.+..+.=.+..-++.+...... .... .-.+.+..++..++++...+.
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~-~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQR-SRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCcc-ccCCeeecccHHHHHHHHHHHHhhhH
Confidence 556667889999998665432 11222 1232222222222222222111100 0000 002345556666666666655
Q ss_pred ccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHH
Q psy4866 417 GFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKL 456 (537)
Q Consensus 417 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 456 (537)
. .+....+..+..++++|..+..+...+..+|-++|..+
T Consensus 389 ~-~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 389 L-GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred H-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 34455778888888888888888888888888777765
No 261
>KOG1237|consensus
Probab=98.14 E-value=0.00029 Score=71.45 Aligned_cols=151 Identities=13% Similarity=0.091 Sum_probs=116.1
Q ss_pred ccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh-hhhhHHHHHHHHHHHHHHHHHHHHhhH----
Q psy4866 83 AWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR-IGRKWSLLMTGPITTASWIIAMYSRSV---- 157 (537)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~l~~~~~~~~~~~~~~---- 157 (537)
++....+..+.. +++.+...+.-..+.+.-......+.+++++|- +||-+++.++.++..+|..+..++...
T Consensus 55 g~~~nlv~ylt~---~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~ 131 (571)
T KOG1237|consen 55 GLVSNLVTYLTL---ELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALL 131 (571)
T ss_pred cchhHHHHHHHH---HhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 445667777777 888888888888888888888999999999997 589999999999998886655443221
Q ss_pred ---------------------HHHHHHHHHHHhHhhhhhhhhhhhhhccCC---Ccc---cchhhhHhHHHHHHHHHHHH
Q psy4866 158 ---------------------LGLYVMRTLQGFSMAAIYVISPMYLGEISE---TSI---RGTIGTLFQISCHLGILYTY 210 (537)
Q Consensus 158 ---------------------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~---r~~~~~~~~~~~~~G~~i~~ 210 (537)
..+..+.-+..+|.|+.-+...++-+|-++ +++ +...+.++....++|..++.
T Consensus 132 p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~ 211 (571)
T KOG1237|consen 132 PFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQ 211 (571)
T ss_pred CccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHH
Confidence 245666777788999999999999999998 222 34677888888999998887
Q ss_pred HHhhh----hhHHHHHHHHHHHHHHHHHHh
Q psy4866 211 VLGSE----LSYMNYLTYSLIIPIIFTVTF 236 (537)
Q Consensus 211 ~l~~~----~~wr~~~~~~~~~~~~~~~~~ 236 (537)
.+.-+ .+|.+-|.+..+..++.++++
T Consensus 212 t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 212 TVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred HHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 66544 489988888777766555443
No 262
>KOG2325|consensus
Probab=98.11 E-value=2.6e-05 Score=75.87 Aligned_cols=149 Identities=9% Similarity=0.038 Sum_probs=101.2
Q ss_pred hhHHHHHHHHHHHHHhhhHhhhhcccCC-cHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHh
Q psy4866 337 SDYISILFAIILLVSIFPSTYYIDRAGR-RVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFN 415 (537)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (537)
-++......++..+++++.|++..|.+. |+.++.+.++..++.++.....+..+ ...++.++.=++.|++
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~-------~~~y~mL~~R~l~Gvg-- 143 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPN-------GVKYLMLVARILTGVG-- 143 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhccc-------chHHHHHHHHHHcCcC--
Confidence 3466677889999999999999999886 88888999999999888844432211 1233333333333333
Q ss_pred hccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHh--hc-----------cchhhhHhhHHHHHHHH
Q psy4866 416 LGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKH--IG-----------MYSNFLFGGVSSLVCTV 482 (537)
Q Consensus 416 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~--~g-----------~~~~~~~~~~~~~~~~~ 482 (537)
.+...+.-.|+++..-.+.|.++++..+....+|.++||.+...+... .| |..+-++.+++.++.++
T Consensus 144 ~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 144 VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 333445568888877777889999988887888888887765433221 01 33466777888888888
Q ss_pred HHHhhccCCCCC
Q psy4866 483 YLYYFLLETKGK 494 (537)
Q Consensus 483 ~~~~~~~~~~~~ 494 (537)
+...+++|..+.
T Consensus 224 ~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 224 IILFFFKEVYRG 235 (488)
T ss_pred HHHhheeecccC
Confidence 877777775543
No 263
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.11 E-value=8.1e-06 Score=58.23 Aligned_cols=65 Identities=20% Similarity=0.289 Sum_probs=55.0
Q ss_pred hhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHH
Q psy4866 77 TTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPIT 144 (537)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~ 144 (537)
+.-...+...|.+|...+ +.|++..++|.+.++..+...++.+++|.++||+|+++.++....++
T Consensus 11 ~~f~~~g~~~Pfl~~~~~---~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLK---QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHhhhhHhhh---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 333455667788888888 89999999999999999999999999999999999888777665543
No 264
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.10 E-value=0.0002 Score=66.57 Aligned_cols=157 Identities=16% Similarity=0.070 Sum_probs=93.1
Q ss_pred HHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccch
Q psy4866 323 YANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSW 401 (537)
Q Consensus 323 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (537)
|.-.+++++|+.. +.........+...+...+.|.+.||+|||+..+...++..++++.--. +..+
T Consensus 56 Y~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~-------------~~~~ 122 (354)
T PF05631_consen 56 YLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS-------------SNYP 122 (354)
T ss_pred hhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-------------cccH
Confidence 3334456677763 3335555566677788888999999999999998888888887764322 2233
Q ss_pred hhHHHHHHHHHHHhhccccchhh-hcccc----CCccccchhhHHHHHH-HHHHHHHHHHHHHHHHHhhcc--chhhhHh
Q psy4866 402 VPFLSISLLGVFFNLGFGPLFTP-LLSEY----FSSNMKAVSCAVINIL-CTTLGLISYKLFFLMDKHIGM--YSNFLFG 473 (537)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g~l~~~~g~--~~~~~~~ 473 (537)
..++.=++.+...+..+.. .-+ ++.|. +|++..+...+...+. +.+..+++..+...+.+..|. ..+|...
T Consensus 123 ~L~~GRvlgGiaTSLLfS~-FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a 201 (354)
T PF05631_consen 123 VLLLGRVLGGIATSLLFSA-FESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAA 201 (354)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHH
Confidence 3333333334443333222 222 22333 5666556666655533 334455555566666676654 6678877
Q ss_pred hHHHHHHHHHHHhhccCCCC
Q psy4866 474 GVSSLVCTVYLYYFLLETKG 493 (537)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~ 493 (537)
..+.+++.++.....+|..+
T Consensus 202 ~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 202 IVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HHHHHHHHHHHHhcccccCC
Confidence 77777777766555556544
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.09 E-value=0.00031 Score=67.77 Aligned_cols=139 Identities=13% Similarity=0.078 Sum_probs=80.6
Q ss_pred HHHHhhhhhhhhhccchhhHHhhhcCCCC--CCCCCChhhHHHHHHHHHHhhhhhhhHHhhh-----hhhhhHHHHHH-H
Q psy4866 70 TACIAAFTTGMSFAWSAPVLEELLSKESP--IPMSPNEGSWVVAIIEIGNYLSPIPAGMLVN-----RIGRKWSLLMT-G 141 (537)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~~-~ 141 (537)
++.+..++.|.-.+.....+|.+.+ + -+.|.+|.+...-+ ...+. .-++|.++.| |+||||.-++= -
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~---~~~~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q 78 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQ---SMAKKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQ 78 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhc---cccCCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHH
Confidence 3455678889999988788899988 6 57787776644221 11111 2345555555 79998764432 2
Q ss_pred HHHHHHHHHHHHHh----------------------h--HHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhH
Q psy4866 142 PITTASWIIAMYSR----------------------S--VLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTL 197 (537)
Q Consensus 142 ~l~~~~~~~~~~~~----------------------~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 197 (537)
.+.++..+..+... + ...+....++.=+-++---.+.-.+.-.+..+++++.+...
T Consensus 79 ~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTc 158 (544)
T PF13000_consen 79 YLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTC 158 (544)
T ss_pred HHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHH
Confidence 22222222222111 0 11222223233333333344555555666778889999999
Q ss_pred hHHHHHHHHHHHHHHh
Q psy4866 198 FQISCHLGILYTYVLG 213 (537)
Q Consensus 198 ~~~~~~~G~~i~~~l~ 213 (537)
...+.++|.+++..+-
T Consensus 159 qtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 159 QTVGQTAGYFLSFTVF 174 (544)
T ss_pred HHhHhhhhHHHHHHHH
Confidence 9999999998886654
No 266
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.05 E-value=0.00041 Score=67.57 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---h------HHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCc---ccchhhhHhHHHH
Q psy4866 135 WSLLMTGPITTASWIIAMYSR---S------VLGLYVMRTLQGFSMAAIYVISPMYLGEISETS---IRGTIGTLFQISC 202 (537)
Q Consensus 135 ~~l~~~~~l~~~~~~~~~~~~---~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 202 (537)
|+++++.+++.+|.++..++. + .+.++++-++.++|.|+.-+...++++|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 678889999999999855543 2 257889999999999999999999999999765 3677888899999
Q ss_pred HHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHhhc
Q psy4866 203 HLGILYTYVLGSE----LSYMNYLTYSLIIPIIFTVTFMF 238 (537)
Q Consensus 203 ~~G~~i~~~l~~~----~~wr~~~~~~~~~~~~~~~~~~~ 238 (537)
++|..++..+..+ .+|.+.|.+.++..++.++.++.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999877766 47999999988887776665544
No 267
>KOG1479|consensus
Probab=97.71 E-value=0.0044 Score=58.92 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh---hhh------hHHHHHHHHH
Q psy4866 156 SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG---SEL------SYMNYLTYSL 226 (537)
Q Consensus 156 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~---~~~------~wr~~~~~~~ 226 (537)
.|...++.-.+.|++.|......+...++ +|++.-+.. ..|.++++.+..++. ... +=...|.+..
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqav----m~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAV----MSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHH----HhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHH
Confidence 46667777888888888888777776665 555543322 233334433333222 111 2234555666
Q ss_pred HHHHHHHHHhhcccCChH
Q psy4866 227 IIPIIFTVTFMFMPESPY 244 (537)
Q Consensus 227 ~~~~~~~~~~~~~~esp~ 244 (537)
++.+++++....+|..|-
T Consensus 191 ~~~llC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 191 VILLLCFVLYLVLPKLPF 208 (406)
T ss_pred HHHHHHHHHHHHhhcchH
Confidence 666666666667777763
No 268
>KOG2563|consensus
Probab=97.68 E-value=0.00071 Score=64.44 Aligned_cols=157 Identities=12% Similarity=0.162 Sum_probs=96.5
Q ss_pred chHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhH
Q psy4866 297 SNMKAFVFMAFLAVFRA---FTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSA 373 (537)
Q Consensus 297 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 373 (537)
+.||..++.+.+..+.+ +..+..+..+...++. ....+.+...++.+..++..+.+-|+.||+|-|..++++..
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg---s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG---SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc---chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 34444444444443322 3334455555555443 22234477888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCcccch--hhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHH
Q psy4866 374 GCSLFSFIAGLYYYVTIELQYEIPYTSW--VPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGL 451 (537)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 451 (537)
+.+++..+=.+.....- ++..+ +......+......+.. .+..-+..-.+|+++|+++..+..+...+|.+
T Consensus 118 ln~iGa~Ir~iss~p~v------~~~f~~~l~~~Gq~iaa~Aq~Fim-~lPskiA~~WF~~~qra~A~~~~v~~n~LGva 190 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFV------PPLFRRPLTHTGQSIAAAAQPFIL-GLPSKIAAVWFPPDQRAIATVLGVMGNPLGVA 190 (480)
T ss_pred HHHHHHHHhhhccCccc------cccchhhhhHHhHHHHHHhhhHhh-ccccHHHHhhCCcchhhhhhhHHHhcchHHHH
Confidence 88888765544321100 12222 22233333333322222 12213334458999999999999999999998
Q ss_pred HHHHHHHHHHHh
Q psy4866 452 ISYKLFFLMDKH 463 (537)
Q Consensus 452 ~~~~~~g~l~~~ 463 (537)
++..+-..+..+
T Consensus 191 vg~llppilV~~ 202 (480)
T KOG2563|consen 191 VGFLLPPILVPS 202 (480)
T ss_pred HHhhccceecCC
Confidence 888777666654
No 269
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.68 E-value=0.0015 Score=57.66 Aligned_cols=51 Identities=10% Similarity=0.193 Sum_probs=36.0
Q ss_pred cccchhhhHhHHHHHHHHHHHH--HHhh-h------hhHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 189 SIRGTIGTLFQISCHLGILYTY--VLGS-E------LSYMNYLTYSLIIPIIFTVTFMFM 239 (537)
Q Consensus 189 ~~r~~~~~~~~~~~~~G~~i~~--~l~~-~------~~wr~~~~~~~~~~~~~~~~~~~~ 239 (537)
++|+..+.+...+.++|.++.. .+-. - -+|++.+.+.+++.++-++++.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678888888888999998763 3322 1 279999999888877655555443
No 270
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.66 E-value=0.0012 Score=68.27 Aligned_cols=143 Identities=10% Similarity=0.074 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHhhhHhhhhcc-cCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhc
Q psy4866 339 YISILFAIILLVSIFPSTYYIDR-AGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLG 417 (537)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (537)
.....+....-+..+++|+++|+ +|+++.+..+.++..++.+++.+...... .........++.+.+..++.+.
T Consensus 27 ~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~----~~~~~~~~~l~gLaLia~G~Gg- 101 (654)
T TIGR00926 27 VLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSS----GHPLHDLLDLLGLALIALGTGG- 101 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccc----ccchHHHHHHHHHHHHHhhccc-
Confidence 33444445555667778899986 69999999998888888877765211000 0000111233344444444443
Q ss_pred cccchhhhccccCCcc---ccchhhHHHHHHHHHHHHHHHHHHHHHHHhh-------ccchhhhHhhHHHHHHHHHHHh
Q psy4866 418 FGPLFTPLLSEYFSSN---MKAVSCAVINILCTTLGLISYKLFFLMDKHI-------GMYSNFLFGGVSSLVCTVYLYY 486 (537)
Q Consensus 418 ~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-------g~~~~~~~~~~~~~~~~~~~~~ 486 (537)
.-|...+...|.++++ .+-..+.+.....++|+.+++.+.+++.+.. +|...|.+.+++++++.++...
T Consensus 102 iKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 102 IKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred cccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3344447778877653 3667888888999999999999999887553 4777788877777777666543
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.61 E-value=0.0022 Score=61.52 Aligned_cols=111 Identities=19% Similarity=0.203 Sum_probs=82.2
Q ss_pred CCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHH-----HHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhh
Q psy4866 102 SPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGP-----ITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYV 176 (537)
Q Consensus 102 s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~-----l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 176 (537)
-.++..+...+|.+|..++.--...+ |+ |++.+.+.+ +..+.....-+.++.|.+++.-+..|+..|..++
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 35677888888888877765433222 33 333333222 2222222334567899999999999999999999
Q ss_pred hhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh
Q psy4866 177 ISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL 216 (537)
Q Consensus 177 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~ 216 (537)
-....+.|-.++++|..+++....+-++|..++.+++-.+
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887554
No 272
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.37 E-value=0.0097 Score=49.12 Aligned_cols=108 Identities=12% Similarity=0.160 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhcc
Q psy4866 339 YISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGF 418 (537)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (537)
....+......+..++.+.+.+++|.|+.++++.+...+-...... ...+..+....+.|.+.+..+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-------------~~~~~l~~~s~l~G~~~a~lW 107 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY-------------PNSYTLYPASALLGFGAALLW 107 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-------------hhHHHHHHHHHHHhhhhHHhh
Confidence 4555666777888888999999999999999988877755444322 235566677778888888777
Q ss_pred ccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHH
Q psy4866 419 GPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLM 460 (537)
Q Consensus 419 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 460 (537)
.+.. .++.+...++.+++-.++...+.+.+.++|..+.-.+
T Consensus 108 ~aqg-~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 108 TAQG-TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred Hhhh-HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654 7888888888899999998888888877777655443
No 273
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.30 E-value=0.0035 Score=62.21 Aligned_cols=131 Identities=11% Similarity=0.036 Sum_probs=83.3
Q ss_pred HHhhhHhhhhcccC-----CcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhh
Q psy4866 350 VSIFPSTYYIDRAG-----RRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTP 424 (537)
Q Consensus 350 ~~~~~~g~l~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (537)
...++.|.++|-+. ||+.++++.++..++.+.++..... ..+.....+.+++...+.... -.+.-+
T Consensus 39 ~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~l~la~~g~a~~-DV~aDa 109 (433)
T PF03092_consen 39 SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS--------ESSAAIAVVLLFLASFGYAFA-DVAADA 109 (433)
T ss_pred HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc--------cchhhhHHHHHHHHHHHHHHH-HHhhhH
Confidence 45678899999874 4445555665555545544443110 112222233333333333332 223446
Q ss_pred hccccC---CccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHhhccC
Q psy4866 425 LLSEYF---SSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLE 490 (537)
Q Consensus 425 ~~~~~~---p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
+..|.. |.+ +|...+....+..+|+.++..+.|.+.+..+++..|.+.+.+..+..+..+.+.+|
T Consensus 110 ~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 110 LVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 666664 444 77888888999999999999999999999999988888877777776666565555
No 274
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.29 E-value=0.0015 Score=46.58 Aligned_cols=64 Identities=14% Similarity=0.163 Sum_probs=50.8
Q ss_pred HHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHH
Q psy4866 311 FRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAG 374 (537)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 374 (537)
+..+++...+..|.+.++++.|.+. +.+....+..+..+++.++.|.++||.++++........
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3344456778889999999888873 455777788899999999999999999999887765543
No 275
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.22 E-value=4.6e-05 Score=77.04 Aligned_cols=170 Identities=17% Similarity=0.175 Sum_probs=1.0
Q ss_pred HHHHHHHHHHHHHhcCCC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC
Q psy4866 317 VQSIIAYANTIFASSETF-LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (537)
...+..-++.+-++.+.+ .+.+.+...+-++.++..++..++.+|..|-+.+-.+.++++++.+++++-.........+
T Consensus 19 ~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 19 SGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 333344444544455554 3555777788899999999999999998888888899999999988887654332111000
Q ss_pred ----------------------------------Ccccc----hhhHHHHHHHHHHHhhccccchhhhccccCCccccch
Q psy4866 396 ----------------------------------IPYTS----WVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAV 437 (537)
Q Consensus 396 ----------------------------------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 437 (537)
..... +..++..++.|.+.. ...++..+|+-|.++++..+.
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~-pl~tLG~tYiDDnv~~~~spl 177 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGAT-PLYTLGITYIDDNVSKKNSPL 177 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhcccc-CCccceeeeeccccccccCcc
Confidence 00111 122222233333322 244567789999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh---------------------hc-cchhhhHhhHHHHHHHHHHHhh
Q psy4866 438 SCAVINILCTTLGLISYKLFFLMDKH---------------------IG-MYSNFLFGGVSSLVCTVYLYYF 487 (537)
Q Consensus 438 ~~g~~~~~~~~g~~~~~~~~g~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~~ 487 (537)
..|+......+|-++|-.+.+...+. .| |+..|++.+.+.++..+....+
T Consensus 178 YiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F 249 (539)
T PF03137_consen 178 YIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF 249 (539)
T ss_dssp ------------------------------------------------------------------------
T ss_pred chhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999988888887777655431 12 4555666666666665555333
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.16 E-value=0.013 Score=57.36 Aligned_cols=137 Identities=15% Similarity=0.051 Sum_probs=96.4
Q ss_pred chhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHH---HHh------
Q psy4866 85 SAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAM---YSR------ 155 (537)
Q Consensus 85 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~---~~~------ 155 (537)
+...+..+.. .-|+++..+|..-+...+....+.+...++.+|+|..|.=++++....+...++. +.+
T Consensus 277 f~~lmt~yl~---~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~ 353 (432)
T PF06963_consen 277 FGGLMTAYLK---SQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSS 353 (432)
T ss_pred CcHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchh
Confidence 4555555555 5699999999999999999999999999999999988877777654443333222 111
Q ss_pred -hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhhhHHHHHHH
Q psy4866 156 -SVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSELSYMNYLTY 224 (537)
Q Consensus 156 -~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~~wr~~~~~ 224 (537)
+...++.+-.+.=+|.=+.-....-++.|..|+++||...+.-....++--++...++-.+....-|..
T Consensus 354 ~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~ 423 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFGW 423 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcCh
Confidence 233344344444444444556677788999999999999999998888888887777655443333333
No 277
>PRK03612 spermidine synthase; Provisional
Probab=97.12 E-value=0.038 Score=55.99 Aligned_cols=116 Identities=15% Similarity=0.052 Sum_probs=68.1
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHH---HHHH----HHHhhH-HHHHHHHHHHHh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTAS---WIIA----MYSRSV-LGLYVMRTLQGF 169 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~---~~~~----~~~~~~-~~l~~~r~l~G~ 169 (537)
-+|-+..+.+.+.+++.+|.++|+.+++++.++.-++.. .+-+.+..++ ..+. ++...+ ..++..-++.|+
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 122 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL 122 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457788889999999999999999999988744333322 2211111111 1111 111111 223344567788
Q ss_pred HhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 170 SMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 170 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
..|+..|....+..+... ++-+...+-......+|.++|.++.++
T Consensus 123 l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 123 LIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 888888887777665432 123455556666666666666666544
No 278
>KOG3098|consensus
Probab=97.06 E-value=0.036 Score=54.35 Aligned_cols=102 Identities=17% Similarity=0.208 Sum_probs=77.9
Q ss_pred HHHHHhhhhhhhHHhhh---hhhhhHHHHHHHHHHHHHHHHHHHH------------------hhHHHHHHHHHHHHhHh
Q psy4866 113 IEIGNYLSPIPAGMLVN---RIGRKWSLLMTGPITTASWIIAMYS------------------RSVLGLYVMRTLQGFSM 171 (537)
Q Consensus 113 ~~~~~~~~~~~~G~l~d---r~Grr~~l~~~~~l~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~ 171 (537)
..+|..+++.+.+.+.+ ++||++++.++.++..++.++.-+. +++...++.-++.|++-
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 33444555566666665 4889999999998888887776553 24667788899999999
Q ss_pred hhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhh
Q psy4866 172 AAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSE 215 (537)
Q Consensus 172 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~ 215 (537)
+......+.++.+.. +++|..+.++...-..++..++......
T Consensus 368 ~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999 5678888998887777777766554433
No 279
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.06 E-value=0.02 Score=55.09 Aligned_cols=131 Identities=11% Similarity=0.005 Sum_probs=84.6
Q ss_pred HHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhc
Q psy4866 347 ILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLL 426 (537)
Q Consensus 347 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (537)
..++..+....+.|.++.|++++++.+...+...++.+. ...+...+.-++.|...+.- ...++++
T Consensus 53 Syl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~------------~sv~~mq~~q~~yg~~~a~e--vay~sYi 118 (412)
T PF01770_consen 53 SYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG------------TSVLAMQLMQFFYGLATAAE--VAYYSYI 118 (412)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH------------CcHHHHHHHHHHHHHHHHHH--HHHHHHh
Confidence 345556667889999999999999888777776666553 23344445555555554432 2344777
Q ss_pred cccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc--cchhhhHhhHHHHHHHHHHHhhccCCC
Q psy4866 427 SEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIG--MYSNFLFGGVSSLVCTVYLYYFLLETK 492 (537)
Q Consensus 427 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
-...|+++-.++.+......-+|.+++..++-.+....+ +.....+..+...++.++. +++|..+
T Consensus 119 ys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~-~fLP~~~ 185 (412)
T PF01770_consen 119 YSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIA-LFLPMPK 185 (412)
T ss_pred eeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHcCCCC
Confidence 777888888899999999988888888887776666333 3333333333333443333 5566544
No 280
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.05 E-value=0.028 Score=55.76 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=74.9
Q ss_pred HHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCC----------cc----------cchhhHHHHH
Q psy4866 349 LVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEI----------PY----------TSWVPFLSIS 408 (537)
Q Consensus 349 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~----------~~~~~~~~~~ 408 (537)
++..++.+++++|++|++++..........+.++++..+..... .++ .. ..|...+...
T Consensus 58 ~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~-~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv 136 (472)
T TIGR00769 58 VIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDL-LHPTALADKLLSLLPPGFMGFIAILRIWSFALFYV 136 (472)
T ss_pred HHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhh-cCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHH
Confidence 33377789999999999998877777776666666654332200 000 00 0222222222
Q ss_pred HHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 409 LLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK 462 (537)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 462 (537)
..........+-+.|.+++|.+..++..+-.++....+++|..+++.+..++.+
T Consensus 137 ~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 137 MAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222233333778999999999999999999999999999999998888763
No 281
>KOG3097|consensus
Probab=96.94 E-value=0.32 Score=44.83 Aligned_cols=99 Identities=18% Similarity=0.246 Sum_probs=69.8
Q ss_pred HHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCC--cc
Q psy4866 113 IEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISET--SI 190 (537)
Q Consensus 113 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~ 190 (537)
..+....++++.+.+..++|.|.++.++...+... +..-+-+.|..++-.-.+.|+|.+..+..--+++++.-.. +.
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 33455566666669999999999999998888664 4444557888999999999999999998888887765432 22
Q ss_pred c-------------chhhhHhHHHHHHHHHHHHHH
Q psy4866 191 R-------------GTIGTLFQISCHLGILYTYVL 212 (537)
Q Consensus 191 r-------------~~~~~~~~~~~~~G~~i~~~l 212 (537)
| |....++......|..++..+
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 3 334444555555665555443
No 282
>KOG3626|consensus
Probab=96.76 E-value=0.015 Score=59.87 Aligned_cols=173 Identities=18% Similarity=0.141 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHhcCCC-CChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC--
Q psy4866 319 SIIAYANTIFASSETF-LPSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE-- 395 (537)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 395 (537)
.+..-+..+=+..+.+ ..++++...+-++..+...+..+...|..|-+.+-.+.++++++.++.++.........++
T Consensus 115 y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~ 194 (735)
T KOG3626|consen 115 YFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELE 194 (735)
T ss_pred hhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhh
Confidence 3333334433344444 2444666667778888888888998999998999999999999988887653221110000
Q ss_pred -------------------------------C---ccc---ch-hhHHHHHHHHHHHhhccccchhhhccccCCccccch
Q psy4866 396 -------------------------------I---PYT---SW-VPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAV 437 (537)
Q Consensus 396 -------------------------------~---~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 437 (537)
. ... .| +.++..++.|.+. .-..++..+|+-|-..++....
T Consensus 195 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~-Tpi~tlGisYiDDnvk~~~Spl 273 (735)
T KOG3626|consen 195 VIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGA-TPIFTLGISYIDDNVKKKNSPL 273 (735)
T ss_pred hhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCC-CCCccCCCccccccccccCCcH
Confidence 0 011 11 1122222233332 2244566688889888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh------------------c-cchhhhHhhHHHHHHHHHHHhhccCCCC
Q psy4866 438 SCAVINILCTTLGLISYKLFFLMDKHI------------------G-MYSNFLFGGVSSLVCTVYLYYFLLETKG 493 (537)
Q Consensus 438 ~~g~~~~~~~~g~~~~~~~~g~l~~~~------------------g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (537)
..|+...+..+|-++|-.+.+.+...+ | |+..|++.+.+.++..+.. +++|+...
T Consensus 274 Ylgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~-f~fPk~lp 347 (735)
T KOG3626|consen 274 YLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL-FFFPKELP 347 (735)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH-HhCcccCc
Confidence 999999999999888888887766421 2 4455777777777776665 44555443
No 283
>KOG3880|consensus
Probab=96.20 E-value=0.021 Score=51.63 Aligned_cols=129 Identities=14% Similarity=0.103 Sum_probs=81.5
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhcc
Q psy4866 106 GSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEI 185 (537)
Q Consensus 106 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 185 (537)
.|.+.-+-.+...+..+.+....||+---.=+.+..++.+.+.++.+++++.++-+.+-.+..++.|.....-.++-+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~- 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR- 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence 4555556666677777777788888543222344456667788888999999999999999988888776655544333
Q ss_pred CCCcccchhhhHhHHHHHHHHHHHH----HHhhh--hhHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 186 SETSIRGTIGTLFQISCHLGILYTY----VLGSE--LSYMNYLTYSLIIPIIFTVTFMFM 239 (537)
Q Consensus 186 ~~~~~r~~~~~~~~~~~~~G~~i~~----~l~~~--~~wr~~~~~~~~~~~~~~~~~~~~ 239 (537)
+++. ..+.+..+.+.++++|. .+..+ +.-|...++...+.++..+.++++
T Consensus 143 Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 143 YPSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred CCCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhe
Confidence 3332 34444444444444443 23322 356777777777776666665554
No 284
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.17 E-value=0.0012 Score=62.16 Aligned_cols=117 Identities=13% Similarity=0.012 Sum_probs=2.2
Q ss_pred HHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccC--CcccchhhHHHHHHHHHHHhh
Q psy4866 339 YISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYE--IPYTSWVPFLSISLLGVFFNL 416 (537)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 416 (537)
.....+.++..+|+.+.++..-+..+++.+.+..+.-.+..-++........ .+.. .-.+.+..++.+++++...+.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~-~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPR-PRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcc-cccCCCcccchHHHHHHHHHHHHccch
Confidence 3456788999999998887532211333333322222222222222111100 0000 001334445555666665554
Q ss_pred ccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHH
Q psy4866 417 GFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLF 457 (537)
Q Consensus 417 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 457 (537)
. .++...+..+..++++|..+..+..+.-.+|-.+|..+.
T Consensus 265 l-~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 L-STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ---HHHH----------------------------------
T ss_pred h-hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 445567888888888888888887777777777776543
No 285
>PRK03612 spermidine synthase; Provisional
Probab=96.09 E-value=0.2 Score=50.82 Aligned_cols=50 Identities=12% Similarity=0.091 Sum_probs=36.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHH-hhccchhhhHhhHHHHHHHHHH
Q psy4866 435 KAVSCAVINILCTTLGLISYKLFFLMDK-HIGMYSNFLFGGVSSLVCTVYL 484 (537)
Q Consensus 435 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~-~~g~~~~~~~~~~~~~~~~~~~ 484 (537)
.+...|-.+....+|+++|..+.+.+.- ..|.....++.+.+.+++.++.
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 4677888999999999999999887664 6777666666655555544433
No 286
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.94 E-value=0.32 Score=45.46 Aligned_cols=136 Identities=15% Similarity=0.084 Sum_probs=80.9
Q ss_pred HHHHHHHHhcCCCC---ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcc
Q psy4866 322 AYANTIFASSETFL---PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPY 398 (537)
Q Consensus 322 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (537)
...+.+........ ..........+...++.++.|.+.||.|||+.+..+.....++.+...+.. ..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~ 92 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP----------NV 92 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc----------cc
Confidence 34444444443332 234666667777778889999999999999777766655333323332210 00
Q ss_pred cchhhHHHHHHHHHHHhhccccchhhhccccCCc-cccchhhHHHHH-HHHHHHHHHHHHHHHHHHh--hccch
Q psy4866 399 TSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSS-NMKAVSCAVINI-LCTTLGLISYKLFFLMDKH--IGMYS 468 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~-~~~~g~~~~~~~~g~l~~~--~g~~~ 468 (537)
..+.........+.+.+ ...+....+..|..|. +.|+...+.... ...++..+++.+.+.+... .+|+.
T Consensus 93 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T COG0477 93 GLALLLILRLLQGLGGG-GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRA 165 (338)
T ss_pred hHHHHHHHHHHHHhhhH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 12222222222333333 2345556888898887 567888888887 5777888888766666554 34554
No 287
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.82 E-value=0.046 Score=53.27 Aligned_cols=117 Identities=12% Similarity=0.081 Sum_probs=78.0
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhhccccCCcc---ccchhhHHH
Q psy4866 366 VLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSN---MKAVSCAVI 442 (537)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~ 442 (537)
+.+.++.++..++.+++.+...... .+.........+.+.++..+.+. .-|...++..|.++++ .+.+.....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~---~~~~~~~~~~~~gL~lia~G~G~-~K~ni~~~~~dq~~~~~~~~~~~~F~~f 77 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPS---LPSGIQLGLFYIGLALIAVGTGG-IKPNISPFGADQYDEDDDSRRDSFFNWF 77 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSS---C------CHHHHHHHHHHHHHHC-CHHHHHHHHHHCSSTTTTTHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcch---hhhhHHHHHHHHHHHHHHhcccc-ccccHHHHHHHHhcccchhhhhhhHHHH
Confidence 4567777777888777555432211 00011224455556666666554 4455558888888765 456677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHHHHh
Q psy4866 443 NILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVYLYY 486 (537)
Q Consensus 443 ~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 486 (537)
....++|..+++.+.+++.++.||...|.+.++..+++.+..+.
T Consensus 78 Y~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 78 YWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999988888887766543
No 288
>KOG0637|consensus
Probab=95.59 E-value=0.02 Score=54.98 Aligned_cols=155 Identities=20% Similarity=0.124 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcc----cCCcHHHHH-hhHH
Q psy4866 301 AFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDR----AGRRVLFLV-SSAG 374 (537)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~-~~~~ 374 (537)
.++....+....+++ ...-..|.+.+++..|... -.+.......+.+++..++.|..+|| +||||..+. +..+
T Consensus 33 ~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 33 KLISVASIAAGVQFG-WALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 334444444444443 4455667888888887762 23344455567778888999999997 477766554 4445
Q ss_pred HHHHHHHHHHHHHhhhccccCCccc-c--h---hhHHHHHHHHHHHhhccccchhhhccccCCccccch-hhHHHHHHHH
Q psy4866 375 CSLFSFIAGLYYYVTIELQYEIPYT-S--W---VPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAV-SCAVINILCT 447 (537)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~g~~~~~~~ 447 (537)
..++++++.+........ .|.... . + ..++...++-+.......|. -++..++...+.+.+ +.+....+..
T Consensus 112 i~~~l~Lig~aaDig~~l-gd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~-ra~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLL-GDNERKPVKPRAIVLFILGFWLLDVANNTLQGPC-RALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHhhhhhHhhhhHHh-cCCcccccchHHHHHHHHHhHHHHhhhhhhhhhH-HHHHHHhccChhhhhccchhHHHHHH
Confidence 555555554432221100 011111 1 1 11222223333333444443 478888877666666 9999999998
Q ss_pred HHHHHHHHHHH
Q psy4866 448 TLGLISYKLFF 458 (537)
Q Consensus 448 ~g~~~~~~~~g 458 (537)
+|+.+|-.+.+
T Consensus 190 vGnvLGY~~g~ 200 (498)
T KOG0637|consen 190 VGNVLGYALGS 200 (498)
T ss_pred hcceeeeeccc
Confidence 88888766554
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.32 E-value=0.48 Score=46.99 Aligned_cols=108 Identities=14% Similarity=0.107 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhhhhhhhh-HHHHHHHH---HHHHHHHHHHH---------HhhHHHHHHHHHHHHhHhh
Q psy4866 106 GSWVVAIIEIGNYLSPIPAGMLVNRIGRK-WSLLMTGP---ITTASWIIAMY---------SRSVLGLYVMRTLQGFSMA 172 (537)
Q Consensus 106 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-~~l~~~~~---l~~~~~~~~~~---------~~~~~~l~~~r~l~G~~~~ 172 (537)
.-.+...|.+|-.+|..+..+.. .-++| +.+.+..+ ++.--.++|.. -++-+..++.-++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34566777777777777554321 11222 12222222 22222233322 2355677788999999999
Q ss_pred hhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhh
Q psy4866 173 AIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGS 214 (537)
Q Consensus 173 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~ 214 (537)
-....++.+..+..++++|..+..+...+..+|..+|..++.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888877653
No 290
>KOG1479|consensus
Probab=95.09 E-value=1.3 Score=42.53 Aligned_cols=44 Identities=5% Similarity=0.070 Sum_probs=19.0
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHhh
Q psy4866 314 FTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPSTY 357 (537)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 357 (537)
....+.+.+-.+++.+.......+......+.+...+..++.-.
T Consensus 31 LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~ 74 (406)
T KOG1479|consen 31 LLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNL 74 (406)
T ss_pred ccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 33455555555555555433323333333344444443333333
No 291
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.65 E-value=1 Score=45.23 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=73.7
Q ss_pred HHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcc--------------------cchhhHHH
Q psy4866 347 ILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPY--------------------TSWVPFLS 406 (537)
Q Consensus 347 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~ 406 (537)
+.++...+..++++++++.++...........+.++++..+... .-.+++. ..|...+
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~-~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~sl- 148 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNR-DILHPDAFADKLLAILPPGFKGFIAMFRNWTFSL- 148 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhch-hhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHH-
Confidence 34555666789999999999887777766666666666543221 0000000 0011111
Q ss_pred HHHHHHHHh-hccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 407 ISLLGVFFN-LGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK 462 (537)
Q Consensus 407 ~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 462 (537)
..+..-.++ ...+-+.|.+++|.++.++..+-.++.....++|..+++.+..++.+
T Consensus 149 fYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 149 FYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222222 22333568999999999999999999999999999999988887777
No 292
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.39 E-value=0.31 Score=35.28 Aligned_cols=68 Identities=12% Similarity=-0.002 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHhcCCCC-ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHH
Q psy4866 318 QSIIAYANTIFASSETFL-PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLY 385 (537)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (537)
+.+...+|...++.+.+. +.++......++.++|.+...++.++.++++.+..+.+...+..+.+++.
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556788888888773 56688899999999999999999999888888888888888888877764
No 293
>KOG3880|consensus
Probab=94.24 E-value=0.26 Score=44.90 Aligned_cols=119 Identities=15% Similarity=0.173 Sum_probs=86.0
Q ss_pred CCCCCC-ChhhHHHHHHHHHHhhhhhhhHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhh
Q psy4866 98 PIPMSP-NEGSWVVAIIEIGNYLSPIPAGMLVNRI-GRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIY 175 (537)
Q Consensus 98 ~~~~s~-~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 175 (537)
.+.++. .|.-|....|.+|..++.--.-..--++ ---.++..-.+++.+...+..+.++++..++.-+.-|+-.|..+
T Consensus 281 g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasY 360 (409)
T KOG3880|consen 281 GFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASY 360 (409)
T ss_pred CCccchhhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHH
Confidence 444443 3688999999888766543322221111 11123334455556666677788999999999999999888888
Q ss_pred hhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh
Q psy4866 176 VISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL 216 (537)
Q Consensus 176 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~ 216 (537)
+-..--+.+-.++++|-.+++....+-.+|..++..++-.+
T Consensus 361 VNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 361 VNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 88888888888899999999999999999999998887443
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=93.68 E-value=5.2 Score=39.52 Aligned_cols=116 Identities=13% Similarity=0.103 Sum_probs=77.1
Q ss_pred HHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhc-cccC----------Cc-cc--------chhhHHH
Q psy4866 347 ILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIE-LQYE----------IP-YT--------SWVPFLS 406 (537)
Q Consensus 347 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------~~-~~--------~~~~~~~ 406 (537)
+.++..++..++.+++.+.++...........++++++..+...+ .+.| .+ .- .|...+.
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 456677788899999999998887777777777777766552210 0000 11 10 1222222
Q ss_pred HHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4866 407 ISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDK 462 (537)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 462 (537)
..+.-.-.....+-+.+..++|....++..+-.++.+...+++..++..+..++..
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22222222233333667889999999999999999999999999999988888766
No 295
>KOG4332|consensus
Probab=91.54 E-value=0.61 Score=41.74 Aligned_cols=136 Identities=13% Similarity=-0.016 Sum_probs=62.5
Q ss_pred HHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHHHHHHhhhccccCCcccchhhHHHHHHHHHHHhhccccchhhh
Q psy4866 346 IILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAGLYYYVTIELQYEIPYTSWVPFLSISLLGVFFNLGFGPLFTPL 425 (537)
Q Consensus 346 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (537)
...++...+.|-+.||.|||+.-+.-.+...++++.= . ...+...++.=.+-|...+..+...-.=+
T Consensus 83 gSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK-------h------SpqYkVLmVGR~LGGiaTsLLFSaFEsWl 149 (454)
T KOG4332|consen 83 GSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK-------H------SPQYKVLMVGRVLGGIATSLLFSAFESWL 149 (454)
T ss_pred chHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh-------c------CCceEEEeehhhhhhHHHHHHHHHHHHHH
Confidence 3445556668889999999997655544444443321 1 11222333333333333333232222123
Q ss_pred ccccC-----CccccchhhHHHH-HHHHHHHHHHHHHHHHHHHhhccc--hhhhHhhHHHHHHHHHHHhhccCCCCC
Q psy4866 426 LSEYF-----SSNMKAVSCAVIN-ILCTTLGLISYKLFFLMDKHIGMY--SNFLFGGVSSLVCTVYLYYFLLETKGK 494 (537)
Q Consensus 426 ~~~~~-----p~~~~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (537)
+.|.. |.+......+=.. ....+-.++.......+.|+++.. .+|-..+.+..++..+.+.-..|..++
T Consensus 150 iaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygd 226 (454)
T KOG4332|consen 150 IAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGD 226 (454)
T ss_pred HHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCC
Confidence 44543 3332222222222 223344555555556666766544 455544444444444433333344444
No 296
>KOG1237|consensus
Probab=91.19 E-value=8.3 Score=39.74 Aligned_cols=147 Identities=14% Similarity=0.069 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHhhhHhhhhccc-CCcHHHHHhhHHHHHHHHHHHHHHHhhhccc-------c----CCcccchhhHHH
Q psy4866 339 YISILFAIILLVSIFPSTYYIDRA-GRRVLFLVSSAGCSLFSFIAGLYYYVTIELQ-------Y----EIPYTSWVPFLS 406 (537)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~ 406 (537)
..............+++++++|-+ ||-+.+.++.++..++.+++..........+ . ..+......++.
T Consensus 77 ~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~ 156 (571)
T KOG1237|consen 77 NNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLY 156 (571)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHH
Confidence 444445556667778889999965 7888888888888877666655443332110 0 000111111222
Q ss_pred HHHHHHH-HhhccccchhhhccccCC----cccc--chhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHH
Q psy4866 407 ISLLGVF-FNLGFGPLFTPLLSEYFS----SNMK--AVSCAVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLV 479 (537)
Q Consensus 407 ~~~~~~~-~~~~~~~~~~~~~~~~~p----~~~~--~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 479 (537)
..+.... ...+.-+...++-+|-++ .+.+ ..-+.......+.|..++..+.-++-++.||...|.+..+...+
T Consensus 157 ~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~l 236 (571)
T KOG1237|consen 157 GALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNAL 236 (571)
T ss_pred HHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHH
Confidence 2222221 222334444477777776 2222 35677778888999999999888888889999888888887777
Q ss_pred HHHHHH
Q psy4866 480 CTVYLY 485 (537)
Q Consensus 480 ~~~~~~ 485 (537)
+.++.+
T Consensus 237 ai~iF~ 242 (571)
T KOG1237|consen 237 AILIFL 242 (571)
T ss_pred HHHHHH
Confidence 766543
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=87.33 E-value=0.2 Score=47.28 Aligned_cols=106 Identities=13% Similarity=0.242 Sum_probs=3.8
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhh-hhhhHHHHHH--HHHHHHHHHHHH----------HHhhHHHHHHHHHHHHhHhhhh
Q psy4866 108 WVVAIIEIGNYLSPIPAGMLVNR-IGRKWSLLMT--GPITTASWIIAM----------YSRSVLGLYVMRTLQGFSMAAI 174 (537)
Q Consensus 108 ~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~--~~l~~~~~~~~~----------~~~~~~~l~~~r~l~G~~~~~~ 174 (537)
.+...|.++-.+|..+.++.-=+ -.+|.+...+ =+++.-..++|. +.+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667888888888877764211 1244433322 122222222221 2345577778899999999999
Q ss_pred hhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHh
Q psy4866 175 YVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLG 213 (537)
Q Consensus 175 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~ 213 (537)
...++.+..+..++++|..+..+...+..+|..+|..++
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888888888888887665
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=86.01 E-value=26 Score=31.67 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHhhhhhhhHHhhhh-hhhhHHHH----HHHHHHHHHHHHHHH-H----hhHHHHHHHHHHHHhHhhhhhh
Q psy4866 107 SWVVAIIEIGNYLSPIPAGMLVNR-IGRKWSLL----MTGPITTASWIIAMY-S----RSVLGLYVMRTLQGFSMAAIYV 176 (537)
Q Consensus 107 ~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~----~~~~l~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~~~~~~ 176 (537)
....-++..|..+|....|..... +.||+.+. .+++++.+..+.... . .++..+++.-|+.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 444556666777777777887764 56666544 334555554444212 1 1466678888888887655555
Q ss_pred hhhhhhhccCCCcccchhhhHhHHHHHHHHHHH
Q psy4866 177 ISPMYLGEISETSIRGTIGTLFQISCHLGILYT 209 (537)
Q Consensus 177 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~ 209 (537)
+...+-.|+ ++.++.+..-.++..+++|.++-
T Consensus 224 ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 224 VILNLPHEY-KGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHhcChhhh-cCCCcceehhHHHHHHHHHHHHH
Confidence 554444443 33334445555666777877654
No 299
>KOG3574|consensus
Probab=84.93 E-value=20 Score=34.50 Aligned_cols=34 Identities=9% Similarity=-0.029 Sum_probs=21.6
Q ss_pred hhccccCCccccchhhHHHHHHHHHHHHHHHHHH
Q psy4866 424 PLLSEYFSSNMKAVSCAVINILCTTLGLISYKLF 457 (537)
Q Consensus 424 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 457 (537)
.+...+..++..|-+..........|.+.+..++
T Consensus 156 gwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 156 GWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 4555556667677777666666667776665544
No 300
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=84.30 E-value=7 Score=38.83 Aligned_cols=48 Identities=25% Similarity=0.357 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHH
Q psy4866 159 GLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGI 206 (537)
Q Consensus 159 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 206 (537)
.+++.-.+.-+..-..+++..++-+.+.+|.-=|.+|.+.++..++|+
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCC
Confidence 344556777788888889999999999999999999999999999996
No 301
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=82.14 E-value=6.5 Score=32.06 Aligned_cols=33 Identities=6% Similarity=-0.116 Sum_probs=25.6
Q ss_pred cchhhhccccCCccccchhhHHHHHHHHHHHHH
Q psy4866 420 PLFTPLLSEYFSSNMKAVSCAVINILCTTLGLI 452 (537)
Q Consensus 420 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 452 (537)
.+.|.+++....++..|+..|+-.+-.+++-+.
T Consensus 113 GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 455677777788888899999998888876554
No 302
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=80.60 E-value=39 Score=29.62 Aligned_cols=26 Identities=19% Similarity=0.234 Sum_probs=15.3
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhhHH
Q psy4866 194 IGTLFQISCHLGILYTYVLGSELSYM 219 (537)
Q Consensus 194 ~~~~~~~~~~~G~~i~~~l~~~~~wr 219 (537)
.....-.+..+|.+++..+....+.+
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~~ 192 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGFW 192 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 34444555666666666666666643
No 303
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=80.12 E-value=55 Score=31.06 Aligned_cols=85 Identities=12% Similarity=0.043 Sum_probs=59.9
Q ss_pred CCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHH----H-HHHH----hhHHHHHHHHHHHHhH
Q psy4866 100 PMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWI----I-AMYS----RSVLGLYVMRTLQGFS 170 (537)
Q Consensus 100 ~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~----~-~~~~----~~~~~l~~~r~l~G~~ 170 (537)
|-+--|.+.+.+.|..+..+|+...-++.|.--.-+.+..-+++..++.+ + ..|+ ++-+.+.++-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 45667889999999999999999998888764443333333333222211 1 1233 3567788899999999
Q ss_pred hhhhhhhhhhhhhc
Q psy4866 171 MAAIYVISPMYLGE 184 (537)
Q Consensus 171 ~~~~~~~~~~~i~~ 184 (537)
.|...|..+.++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999999988876
No 304
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=80.02 E-value=43 Score=31.05 Aligned_cols=153 Identities=12% Similarity=0.092 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCCCCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhh---hhhhHHHHH
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKESPIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNR---IGRKWSLLM 139 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr---~Grr~~l~~ 139 (537)
++.+..+++.++.++.-+..++.+..+..+.+ .+++..+..+++.+...+. ++.+-.++ ||.||.=++
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLAD---a~Hml~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiL 92 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLAD---ALHMLSDALALLLALIAIK------LARRPATKRFTFGYKRLEIL 92 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHh---HHHHHHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHH
Confidence 44445555556666666666667777777777 7777666666665554433 22233333 888887666
Q ss_pred HHHHHHHHHHHHHHHh--------------hHHHHHHHHHHHHhHhhhhhhhhhhhhhccCC--CcccchhhhH-hHHHH
Q psy4866 140 TGPITTASWIIAMYSR--------------SVLGLYVMRTLQGFSMAAIYVISPMYLGEISE--TSIRGTIGTL-FQISC 202 (537)
Q Consensus 140 ~~~l~~~~~~~~~~~~--------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~-~~~~~ 202 (537)
+.++.++..+..++.- +. ..++.-.+.|+..- ..+.-++.+--. .+.|+..+-. --+..
T Consensus 93 aa~~nav~Li~~s~~I~~EAi~R~~~P~~i~~-~~ml~va~~GL~vN---~~~a~ll~~~~~~~lN~r~a~LHvl~D~Lg 168 (296)
T COG1230 93 AAFLNALLLIVVSLLILWEAIQRLLAPPPIHY-SGMLVVAIIGLVVN---LVSALLLHKGHEENLNMRGAYLHVLGDALG 168 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cchHHHHHHHHHHH---HHHHHHhhCCCcccchHHHHHHHHHHHHHH
Confidence 6666555444433311 11 11112222232211 112222222211 1234444433 45567
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHH
Q psy4866 203 HLGILYTYVLGSELSYMNYLTYSLII 228 (537)
Q Consensus 203 ~~G~~i~~~l~~~~~wr~~~~~~~~~ 228 (537)
++|.+++.++..+.+|.|.=-+.++.
T Consensus 169 sv~vIia~i~i~~~~w~~~Dpi~si~ 194 (296)
T COG1230 169 SVGVIIAAIVIRFTGWSWLDPILSIV 194 (296)
T ss_pred HHHHHHHHHHHHHhCCCccchHHHHH
Confidence 88888888888888998854444433
No 305
>COG3619 Predicted membrane protein [Function unknown]
Probab=78.36 E-value=48 Score=29.35 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhccchhhHHhhhcCCC-----CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhh
Q psy4866 63 LFSFLCVTACIAAFTTGMSFAWSAPVLEELLSKES-----PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGR 133 (537)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr 133 (537)
...+..++...+.+.|.+.+..........+.--- ++.-++...........+...+|......+..|..|
T Consensus 9 ~l~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 9 SLRLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44455666777788888777333333222221000 222234455666777777888886665555555554
No 306
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=75.33 E-value=16 Score=35.77 Aligned_cols=17 Identities=24% Similarity=0.403 Sum_probs=8.5
Q ss_pred HHHHHhhhHhhhhcccC
Q psy4866 347 ILLVSIFPSTYYIDRAG 363 (537)
Q Consensus 347 ~~~~~~~~~g~l~d~~~ 363 (537)
..++.....|++..|.+
T Consensus 7 ~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 7 LPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 34444445556655543
No 307
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=74.83 E-value=31 Score=28.21 Aligned_cols=81 Identities=15% Similarity=0.162 Sum_probs=49.1
Q ss_pred HhhhhhhhhHHHHHHHHHH------HHHHHHHHH----HhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhh
Q psy4866 126 MLVNRIGRKWSLLMTGPIT------TASWIIAMY----SRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIG 195 (537)
Q Consensus 126 ~l~dr~Grr~~l~~~~~l~------~~~~~~~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 195 (537)
..+||.-||..+..|.-.. .+.+.+..- .+++..++..-.+.|+|. ..+.|.+++-.+++++-|..+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcc
Confidence 4567777766655553322 222211111 234555555555555553 345677788888888889999
Q ss_pred hHhHHHHHHHHHHH
Q psy4866 196 TLFQISCHLGILYT 209 (537)
Q Consensus 196 ~~~~~~~~~G~~i~ 209 (537)
|+-.+-.+++-+.-
T Consensus 133 G~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 133 GWEEFKRNWGRMWE 146 (153)
T ss_pred cHHHHHHhHHHHHH
Confidence 99888888876654
No 308
>KOG2881|consensus
Probab=74.29 E-value=66 Score=28.89 Aligned_cols=29 Identities=14% Similarity=0.322 Sum_probs=18.5
Q ss_pred HHhhhHhhhhcccCCcHHHHHhhHHHHHH
Q psy4866 350 VSIFPSTYYIDRAGRRVLFLVSSAGCSLF 378 (537)
Q Consensus 350 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 378 (537)
+..+-+-+++.|+..|++.+.+.+++.+.
T Consensus 255 lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 255 LAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 33333446788888888877776655544
No 309
>KOG2601|consensus
Probab=72.97 E-value=34 Score=32.84 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=25.5
Q ss_pred hhccccCCccccchhhHHHHHHHHHHHHHHH
Q psy4866 424 PLLSEYFSSNMKAVSCAVINILCTTLGLISY 454 (537)
Q Consensus 424 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 454 (537)
-.+.|..|.+.|..+.|+-|.........--
T Consensus 409 qimQe~VpEseR~vv~gvqnsL~~~ldll~~ 439 (503)
T KOG2601|consen 409 QIMQETVPESERCVVFGVQNSLNSALDLLKD 439 (503)
T ss_pred HHHHHhcchhhhhhhHhHHHHHHHHHHHHHH
Confidence 6778999999999999999998877665443
No 310
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=68.04 E-value=1.1e+02 Score=29.00 Aligned_cols=116 Identities=12% Similarity=0.065 Sum_probs=63.0
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHH---HHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhh
Q psy4866 106 GSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPIT---TASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYL 182 (537)
Q Consensus 106 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~---~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 182 (537)
.|....+..++..+. ++.+++.+.+|.-+.+..+.++. .--.+...+++|......+-.+.|.-.|....-.....
T Consensus 49 ~GI~~laP~la~~l~-~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVa 127 (354)
T PF04346_consen 49 AGIMALAPVLAAFLS-PVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVA 127 (354)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhh
Confidence 344444444444443 45568888999989888876664 22344556677777766666666665555543333333
Q ss_pred hccCCC-cccchhhhHhH--HHHHHHHHHHHHHhhhhhHHHHHH
Q psy4866 183 GEISET-SIRGTIGTLFQ--ISCHLGILYTYVLGSELSYMNYLT 223 (537)
Q Consensus 183 ~~~~~~-~~r~~~~~~~~--~~~~~G~~i~~~l~~~~~wr~~~~ 223 (537)
-...++ +++-.+.++.. ....+|.+++.++.+ +++...+.
T Consensus 128 Lgii~k~D~~y~a~Gil~GiitIPiG~~vggl~~g-~~~~~il~ 170 (354)
T PF04346_consen 128 LGIIEKEDHKYLAKGILAGIITIPIGCFVGGLIAG-FDIGMILI 170 (354)
T ss_pred hhhcChhhhHHHHHHHHHHHhhhCHHHHHHHHHHh-CCHHHHHH
Confidence 333333 33333334332 234566666666553 34444333
No 311
>PRK10263 DNA translocase FtsK; Provisional
Probab=67.99 E-value=95 Score=35.28 Aligned_cols=24 Identities=21% Similarity=0.109 Sum_probs=13.6
Q ss_pred HHHHHHhhhhhhhHHhhhhhhhhH
Q psy4866 112 IIEIGNYLSPIPAGMLVNRIGRKW 135 (537)
Q Consensus 112 ~~~~~~~~~~~~~G~l~dr~Grr~ 135 (537)
+..++..+|..+...+..-||--.
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~A 83 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVMA 83 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHHH
Confidence 344555566666666666666433
No 312
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.30 E-value=25 Score=26.53 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHhhhhhhhHHhhhhh-hhhHHHHHH
Q psy4866 107 SWVVAIIEIGNYLSPIPAGMLVNRI-GRKWSLLMT 140 (537)
Q Consensus 107 ~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~ 140 (537)
+.-.++-+++..+.....||+.||| |-++..++.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv 79 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIV 79 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 4445666677777777788999985 445544443
No 313
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=63.87 E-value=1.3e+02 Score=28.28 Aligned_cols=34 Identities=21% Similarity=0.052 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHHHhHhhhhh-hhhhhhhhccCCCc
Q psy4866 156 SVLGLYVMRTLQGFSMAAIY-VISPMYLGEISETS 189 (537)
Q Consensus 156 ~~~~l~~~r~l~G~~~~~~~-~~~~~~i~~~~~~~ 189 (537)
+...-.+--.+++++.|... ....-++.|....+
T Consensus 259 ~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 259 SSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444555667777766553 33333444444333
No 314
>KOG3810|consensus
Probab=62.24 E-value=22 Score=33.67 Aligned_cols=95 Identities=13% Similarity=0.081 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhhhhhhhhH--HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhh
Q psy4866 106 GSWVVAIIEIGNYLSPIPAGMLVNRIGRKW--SLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLG 183 (537)
Q Consensus 106 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 183 (537)
-|..-++..+..+++.+..|++--++.|.. .+.++.+..+...++++.++++|...++-++.+.-.....+++..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 366777888888999999999998877654 344445555555566677789999988888888888888888888888
Q ss_pred ccCCCcccchhhhHhHH
Q psy4866 184 EISETSIRGTIGTLFQI 200 (537)
Q Consensus 184 ~~~~~~~r~~~~~~~~~ 200 (537)
+....+.-|..+|+...
T Consensus 353 ~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTF 369 (433)
T ss_pred HhhhhhhheeeeehHHH
Confidence 88878878888887654
No 315
>COG1422 Predicted membrane protein [Function unknown]
Probab=57.86 E-value=1.2e+02 Score=26.01 Aligned_cols=39 Identities=13% Similarity=0.207 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHH-HHHHHHHhhcccC
Q psy4866 202 CHLGILYTYVLGSELSYMNYLTYSLII-PIIFTVTFMFMPE 241 (537)
Q Consensus 202 ~~~G~~i~~~l~~~~~wr~~~~~~~~~-~~~~~~~~~~~~e 241 (537)
..+..+++|.+.. .+..+...+.+++ ++...++-.++-|
T Consensus 31 ~~ln~~f~P~i~~-~~p~lvilV~avi~gl~~~i~~~~liD 70 (201)
T COG1422 31 GALNVVFGPLLSP-LPPHLVILVAAVITGLYITILQKLLID 70 (201)
T ss_pred HHHHHHHhhhccc-cccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445555555554 3444444444443 3333344444433
No 316
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=54.60 E-value=1.2e+02 Score=31.17 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhhhHhhhhcccCC
Q psy4866 341 SILFAIILLVSIFPSTYYIDRAGR 364 (537)
Q Consensus 341 ~~~~~~~~~~~~~~~g~l~d~~~~ 364 (537)
...+.+.+.+++..++++...++.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCC
Confidence 334555666666666666665654
No 317
>PRK10263 DNA translocase FtsK; Provisional
Probab=53.47 E-value=91 Score=35.43 Aligned_cols=25 Identities=12% Similarity=0.029 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHhhccchhhhH
Q psy4866 448 TLGLISYKLFFLMDKHIGMYSNFLF 472 (537)
Q Consensus 448 ~g~~~~~~~~g~l~~~~g~~~~~~~ 472 (537)
.|+++|..+...+...+|.....++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LI 166 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIA 166 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHH
Confidence 3555555555555555554433333
No 318
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=53.41 E-value=50 Score=27.07 Aligned_cols=26 Identities=23% Similarity=0.316 Sum_probs=21.9
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhH
Q psy4866 110 VAIIEIGNYLSPIPAGMLVNRIGRKW 135 (537)
Q Consensus 110 ~s~~~~~~~~~~~~~G~l~dr~Grr~ 135 (537)
+.-|.+|+.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 35678889999999999999988764
No 319
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.52 E-value=27 Score=26.30 Aligned_cols=36 Identities=8% Similarity=-0.145 Sum_probs=28.1
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy4866 432 SNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMY 467 (537)
Q Consensus 432 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 467 (537)
+..++.+.++--..-.+++.+.....||+.|++-..
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 345677788777888888888888999999986444
No 320
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=51.48 E-value=2.3e+02 Score=27.20 Aligned_cols=80 Identities=15% Similarity=0.190 Sum_probs=35.8
Q ss_pred cchhhHHHHHHHHHHHhhccccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHH-HhhccchhhhHhhHHH
Q psy4866 399 TSWVPFLSISLLGVFFNLGFGPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMD-KHIGMYSNFLFGGVSS 477 (537)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~-~~~g~~~~~~~~~~~~ 477 (537)
..+.......++|...+.-. |+...+..... .......+.....-++|+..+..+..++. -+.|..-.-...+.+.
T Consensus 104 ~~~Vly~lt~vIG~LVG~Ei-PL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~N 180 (508)
T COG4262 104 SRLVLYALTAVIGVLVGAEI-PLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCN 180 (508)
T ss_pred HHHHHHHHHHHHHHHHhcch-HHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHH
Confidence 34445555556666655543 44445544411 11112222233336677666666665543 2344333333334443
Q ss_pred HHHH
Q psy4866 478 LVCT 481 (537)
Q Consensus 478 ~~~~ 481 (537)
++++
T Consensus 181 l~aA 184 (508)
T COG4262 181 LAAA 184 (508)
T ss_pred HHHH
Confidence 3333
No 321
>KOG2601|consensus
Probab=49.58 E-value=2.6e+02 Score=27.25 Aligned_cols=44 Identities=14% Similarity=-0.016 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHhhHHHHHHHHH
Q psy4866 440 AVINILCTTLGLISYKLFFLMDKHIGMYSNFLFGGVSSLVCTVY 483 (537)
Q Consensus 440 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 483 (537)
+.....-..-..+.|.+.|.+....+.+....++++..++...+
T Consensus 178 atir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm~~ 221 (503)
T KOG2601|consen 178 ATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSMWV 221 (503)
T ss_pred hhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHHHHH
Confidence 44444445567888999999888777776666666666665443
No 322
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=47.78 E-value=2.3e+02 Score=30.28 Aligned_cols=44 Identities=14% Similarity=0.000 Sum_probs=29.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHhHhhhh
Q psy4866 131 IGRKWSLLMTGPITTASWIIAMYSRSV-LGLYVMRTLQGFSMAAI 174 (537)
Q Consensus 131 ~Grr~~l~~~~~l~~~~~~~~~~~~~~-~~l~~~r~l~G~~~~~~ 174 (537)
-||.+-++++.++++++++...+...+ |.+..+-++.+++.++.
T Consensus 54 ~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 54 TGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 467777888899998888887765544 45555555555554443
No 323
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=47.49 E-value=92 Score=26.59 Aligned_cols=24 Identities=21% Similarity=0.337 Sum_probs=21.0
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhh
Q psy4866 110 VAIIEIGNYLSPIPAGMLVNRIGR 133 (537)
Q Consensus 110 ~s~~~~~~~~~~~~~G~l~dr~Gr 133 (537)
+.-|.+++.++..+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 367888999999999999999885
No 324
>COG4769 Predicted membrane protein [Function unknown]
Probab=47.07 E-value=22 Score=29.16 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=36.3
Q ss_pred HHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhH
Q psy4866 112 IIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQGFS 170 (537)
Q Consensus 112 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~ 170 (537)
.+.+..++.+...-++..++|+|..-.+|.- ..-++.+|..++.+.+++.|-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhcc
Confidence 3444555666666788889998886544432 3346778999999999887643
No 325
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=45.57 E-value=2.8e+02 Score=29.70 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=30.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHhHhhhh
Q psy4866 131 IGRKWSLLMTGPITTASWIIAMYSRSVL-GLYVMRTLQGFSMAAI 174 (537)
Q Consensus 131 ~Grr~~l~~~~~l~~~~~~~~~~~~~~~-~l~~~r~l~G~~~~~~ 174 (537)
-||.+-++++.++++++++...+...++ .+..+-++.+++.++.
T Consensus 54 ~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 54 TGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 4677888999999999988888765544 4445555555554443
No 326
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=45.13 E-value=6.7 Score=35.07 Aligned_cols=13 Identities=0% Similarity=0.503 Sum_probs=0.0
Q ss_pred HHHHHhhccCCCC
Q psy4866 481 TVYLYYFLLETKG 493 (537)
Q Consensus 481 ~~~~~~~~~~~~~ 493 (537)
+++.|+++.+.++
T Consensus 178 aiLIWlY~H~~~~ 190 (381)
T PF05297_consen 178 AILIWLYVHDQRH 190 (381)
T ss_dssp -------------
T ss_pred HHHHHHHhcCCCC
Confidence 3445566666553
No 327
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=43.52 E-value=32 Score=25.96 Aligned_cols=51 Identities=14% Similarity=0.031 Sum_probs=41.3
Q ss_pred ChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 104 NEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS 154 (537)
Q Consensus 104 ~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~ 154 (537)
+..|-+.++|.-.+.+.++++++..|+.-+.+.=.+|..+..+|..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456778899999999999999999999988777777777777776655443
No 328
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=41.59 E-value=1.4e+02 Score=22.03 Aligned_cols=53 Identities=15% Similarity=0.119 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHh
Q psy4866 303 VFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPST 356 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 356 (537)
.+.....++..+.++.....|.|..+...-.+ .......+.+++.++......
T Consensus 18 ~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~-G~~t~g~~~g~~~~~~~~~l~ 70 (91)
T PF04341_consen 18 AWPLSAIFLVLYFGFVLLSAFAPELMATPVFP-GSLTLGIVLGLGQIVFAWVLT 70 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHcCcccC-CCcCHHHHHHHHHHHHHHHHH
Confidence 33334444444445777788888888764331 122333444455544444433
No 329
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=41.26 E-value=94 Score=20.56 Aligned_cols=41 Identities=15% Similarity=0.264 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcccCC
Q psy4866 202 CHLGILYTYVLGSELSYMNYLTYSLIIPIIFTVTFMFMPES 242 (537)
Q Consensus 202 ~~~G~~i~~~l~~~~~wr~~~~~~~~~~~~~~~~~~~~~es 242 (537)
..+|.+.+++-+..+++.....+..+.+++..++...+|+.
T Consensus 15 ~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 15 EVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34444444444455677777777777777666555555543
No 330
>PRK15086 ethanolamine utilization protein EutH; Provisional
Probab=40.87 E-value=3.4e+02 Score=26.07 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=58.7
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHH---HHHHHHHHHhhHHHHHHHHHHHHhHhhhh----hhh
Q psy4866 105 EGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITT---ASWIIAMYSRSVLGLYVMRTLQGFSMAAI----YVI 177 (537)
Q Consensus 105 ~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~---~~~~~~~~~~~~~~l~~~r~l~G~~~~~~----~~~ 177 (537)
.+|....+..+...+.. +.+++.+.+|.-+.+..+.++.. --.+...++.|......+-.+.|--.|.. .|+
T Consensus 49 m~GI~~laP~ls~~l~~-ii~Pi~~~lgaDpsmfa~siLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPV 127 (372)
T PRK15086 49 MVGIMALAPVLAHVLGP-VIIPIYEALGADPSMFATTLLAVDMGGYQLAKELAGDPEAWLFSGLILGSMMGATIVFTIPV 127 (372)
T ss_pred HHHHHHHHHHHHHHHhh-hHHHHHHHhCCCHHHHHHHHHHhcCcCHHHHHHHhcChhhHHHHHHHHHHhccceEEeeHHh
Confidence 34555555555554443 45688888999888888766542 22345566777766666666666555544 344
Q ss_pred hhhhhhccCCCcccchhhhHh--HHHHHHHHHHHHHHh
Q psy4866 178 SPMYLGEISETSIRGTIGTLF--QISCHLGILYTYVLG 213 (537)
Q Consensus 178 ~~~~i~~~~~~~~r~~~~~~~--~~~~~~G~~i~~~l~ 213 (537)
...++.+ ++++-.+.++. -....+|.+++.++.
T Consensus 128 aLgii~k---~D~~yla~Gil~GiitIPiG~~vggl~~ 162 (372)
T PRK15086 128 ALGIIEK---EDRKYLALGVLAGIITIPIGCLIGGLVA 162 (372)
T ss_pred hHhhcch---hhHHHHHHHHHHHhHhhcHHHHHHHHHH
Confidence 4444332 33333344433 223456666666554
No 331
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=39.54 E-value=3e+02 Score=25.07 Aligned_cols=14 Identities=7% Similarity=0.154 Sum_probs=6.0
Q ss_pred cchhhHHHHHHHHH
Q psy4866 435 KAVSCAVINILCTT 448 (537)
Q Consensus 435 ~~~~~g~~~~~~~~ 448 (537)
|..++|+-..+.+.
T Consensus 77 ~~iGLglg~liW~s 90 (254)
T PF07857_consen 77 KTIGLGLGMLIWGS 90 (254)
T ss_pred hhhhhHHHHHHHHH
Confidence 33444444444433
No 332
>PRK02237 hypothetical protein; Provisional
Probab=39.42 E-value=54 Score=24.88 Aligned_cols=50 Identities=12% Similarity=-0.038 Sum_probs=40.6
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy4866 105 EGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS 154 (537)
Q Consensus 105 ~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~ 154 (537)
..|-+.++|.-.+.+.++++++..|+.-+-+.=.+|..+..+|..+..+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 47888999999999999999999999988777777777777776655444
No 333
>PHA03242 envelope glycoprotein M; Provisional
Probab=39.21 E-value=2.9e+02 Score=27.23 Aligned_cols=21 Identities=0% Similarity=-0.327 Sum_probs=10.9
Q ss_pred cchhhHHHHHHHHHHHHHHHH
Q psy4866 435 KAVSCAVINILCTTLGLISYK 455 (537)
Q Consensus 435 ~~~~~g~~~~~~~~g~~~~~~ 455 (537)
-|...|.......++..+--+
T Consensus 286 ~G~~lG~lia~~~l~~p~~rY 306 (428)
T PHA03242 286 PGPHLGALVAAGIVGVAAHRY 306 (428)
T ss_pred ccchHHHHHHHHHHHHHHHHH
Confidence 466666665555444444333
No 334
>PHA03237 envelope glycoprotein M; Provisional
Probab=38.63 E-value=2.2e+02 Score=28.03 Aligned_cols=18 Identities=0% Similarity=-0.202 Sum_probs=9.1
Q ss_pred cchhhHHHHHHHHHHHHH
Q psy4866 435 KAVSCAVINILCTTLGLI 452 (537)
Q Consensus 435 ~~~~~g~~~~~~~~g~~~ 452 (537)
-|...|.......++..+
T Consensus 289 ~G~~lG~lia~~~l~~p~ 306 (424)
T PHA03237 289 PGPALGLLIAYGMLAVTT 306 (424)
T ss_pred ccchHHHHHHHHHHHHHH
Confidence 455566555554444333
No 335
>COG3162 Predicted membrane protein [Function unknown]
Probab=37.66 E-value=1.7e+02 Score=21.81 Aligned_cols=67 Identities=24% Similarity=0.285 Sum_probs=34.4
Q ss_pred ccchHHhhccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHHHHhhhHh
Q psy4866 287 RTNFREFMGRSNMKAFVFMAFLAVFRAFTGVQSIIAYANTIFASSETFLPSDYISILFAIILLVSIFPST 356 (537)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 356 (537)
...++++.+++ +++.+...+.++..+.++..+..|.|.++...-.+ .+.....+++++.++.+++..
T Consensus 12 ~p~f~eLv~kr--~~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp~~~-~~Vt~Gip~gvg~fv~tfVlt 78 (102)
T COG3162 12 NPRFRELVRKR--RRFAVPLTLIFLVVYFGFILLIAFAPGWLATPLFG-ASVTRGIPFGVGVFVMTFVLT 78 (102)
T ss_pred CHhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCcccC-CceehhHhHHHHHHHHHHHHH
Confidence 34455655422 23333444444444444666677777766554333 233455566666666555443
No 336
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=35.96 E-value=2.4e+02 Score=28.42 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHhhccc
Q psy4866 223 TYSLIIPIIFTVTFMFMP 240 (537)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~ 240 (537)
.+..++.++..++.++.|
T Consensus 6 ~il~iiiv~~~ilt~~iP 23 (465)
T PF03606_consen 6 VILFIIIVFAAILTWIIP 23 (465)
T ss_pred HHHHHHHHHHHHHHhcCc
Confidence 333444444555556665
No 337
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=35.52 E-value=1.2e+02 Score=22.16 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=29.3
Q ss_pred HHhhhhhhhHHhhhhhhh-------hHHHHHHHHHHHHHHHHHHHHhh
Q psy4866 116 GNYLSPIPAGMLVNRIGR-------KWSLLMTGPITTASWIIAMYSRS 156 (537)
Q Consensus 116 ~~~~~~~~~G~l~dr~Gr-------r~~l~~~~~l~~~~~~~~~~~~~ 156 (537)
+.....+.++++.+|.-+ ++.+.++.++...+.++++..+|
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 344455666677766554 78888888888888888887665
No 338
>KOG1484|consensus
Probab=34.73 E-value=4e+02 Score=25.22 Aligned_cols=32 Identities=9% Similarity=0.082 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q psy4866 198 FQISCHLGILYTYVLGSELSYMNYLTYSLIIP 229 (537)
Q Consensus 198 ~~~~~~~G~~i~~~l~~~~~wr~~~~~~~~~~ 229 (537)
.-....+|.++..++-..+||-++=-++.++.
T Consensus 216 aDtlgSvGviist~Li~~~gw~~aDpicsllI 247 (354)
T KOG1484|consen 216 ADTLGSVGVIISTLLIKLFGWMIADPICSLLI 247 (354)
T ss_pred HHHhcchHHHHHHHHHHhcCccchhHHHHHHH
Confidence 34566778888888888888887655555443
No 339
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=34.63 E-value=1.7e+02 Score=20.77 Aligned_cols=40 Identities=8% Similarity=-0.037 Sum_probs=15.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy4866 128 VNRIGRKWSLLMTGPITTASWIIAMYSRSVLGLYVMRTLQ 167 (537)
Q Consensus 128 ~dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~ 167 (537)
+++.=+.-+.+.+.+.+.+|.+...+...+..+.++-++.
T Consensus 9 ae~l~~~il~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~ 48 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIVGYITQSFSYTFYIYGAGVVLT 48 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333444444444443333333333333333
No 340
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=34.56 E-value=2.5e+02 Score=27.24 Aligned_cols=14 Identities=7% Similarity=-0.197 Sum_probs=7.9
Q ss_pred hhhhhhhhhhccCC
Q psy4866 174 IYVISPMYLGEISE 187 (537)
Q Consensus 174 ~~~~~~~~i~~~~~ 187 (537)
.+|+.+.-+.|+-.
T Consensus 41 GfPC~y~~vVDY~~ 54 (374)
T PF01528_consen 41 GFPCFYAAVVDYSA 54 (374)
T ss_pred CCCeeccccccchh
Confidence 35666666666543
No 341
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=33.41 E-value=4e+02 Score=24.78 Aligned_cols=56 Identities=14% Similarity=0.172 Sum_probs=35.8
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh
Q psy4866 160 LYVMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL 216 (537)
Q Consensus 160 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~ 216 (537)
.-..|.+.|+-. ..+..+++++.-.||++++--..--...+.++..++.+++|-.+
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457899999875 45567899999999966543333333444455555556666443
No 342
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=33.36 E-value=5e+02 Score=25.86 Aligned_cols=38 Identities=8% Similarity=0.097 Sum_probs=19.1
Q ss_pred HHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 345 AIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 345 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
++..+.-++++-++.+.+.++++..+=.++.+++++++
T Consensus 301 giLFI~LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lF 338 (430)
T PF06123_consen 301 GILFIGLTFLAFFLFELLSKLRIHPIQYLLVGLALVLF 338 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence 33344444455556666666665544444444444433
No 343
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=32.67 E-value=5.2e+02 Score=25.86 Aligned_cols=39 Identities=15% Similarity=-0.008 Sum_probs=26.8
Q ss_pred CCcccchhhhHhHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q psy4866 187 ETSIRGTIGTLFQISCHLGILYTYVLGSELSYMNYLTYSL 226 (537)
Q Consensus 187 ~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~~wr~~~~~~~ 226 (537)
.+.+.+...++.+++.+.|.+.-|+..+.. |-++..+..
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~-Gf~p~lill 56 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGFG-GLIPILLML 56 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhcc-hHHHHHHHH
Confidence 345567888889999999988888877664 333333333
No 344
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=31.76 E-value=1.5e+02 Score=19.25 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=18.7
Q ss_pred HHHHHHhhhhhhhHHhhhh-hhhhHHHHHHHHHH
Q psy4866 112 IIEIGNYLSPIPAGMLVNR-IGRKWSLLMTGPIT 144 (537)
Q Consensus 112 ~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~l~ 144 (537)
.......+.....|+..|+ +|.++...+..++.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ll 41 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLL 41 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 3444555566667777775 67655554444333
No 345
>PF14851 FAM176: FAM176 family
Probab=31.23 E-value=63 Score=26.51 Aligned_cols=7 Identities=29% Similarity=0.842 Sum_probs=2.6
Q ss_pred hhHhhHH
Q psy4866 470 FLFGGVS 476 (537)
Q Consensus 470 ~~~~~~~ 476 (537)
+++.+++
T Consensus 25 YFv~gVC 31 (153)
T PF14851_consen 25 YFVSGVC 31 (153)
T ss_pred HHHHHHH
Confidence 3333333
No 346
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=31.14 E-value=3.3e+02 Score=23.05 Aligned_cols=26 Identities=8% Similarity=0.210 Sum_probs=16.6
Q ss_pred CCccccchhhHHHHHHHHHHHHHHHH
Q psy4866 430 FSSNMKAVSCAVINILCTTLGLISYK 455 (537)
Q Consensus 430 ~p~~~~~~~~g~~~~~~~~g~~~~~~ 455 (537)
-|.+.+..++++...+..+-.++...
T Consensus 110 ~~~~~~~~gMsIvcv~~Si~ti~~~~ 135 (189)
T PF05313_consen 110 NPGANNNVGMSIVCVIMSIITIIVNS 135 (189)
T ss_pred cCCCcceehhHHHHHHHHHHHHHHHh
Confidence 46667777888877766665444433
No 347
>PRK15015 carbon starvation protein A; Provisional
Probab=30.91 E-value=6.6e+02 Score=26.54 Aligned_cols=39 Identities=18% Similarity=0.153 Sum_probs=27.0
Q ss_pred hccCCCcccchhhhH-hHHHHHHHHHHHHHHhhhhhHHHHH
Q psy4866 183 GEISETSIRGTIGTL-FQISCHLGILYTYVLGSELSYMNYL 222 (537)
Q Consensus 183 ~~~~~~~~r~~~~~~-~~~~~~~G~~i~~~l~~~~~wr~~~ 222 (537)
.|+.|.++ -..++- +....+.|.++||.++..+||--.+
T Consensus 78 ~DYvPt~k-~VLfGHHFasIAGAGPivGPvlAa~~GwlP~~ 117 (701)
T PRK15015 78 LDYVPTDK-KVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGM 117 (701)
T ss_pred CCcCcCCc-cchhHHHHHHHhccCccHHHHHHHHHcchHHH
Confidence 35666554 444444 5566788999999999999997433
No 348
>KOG1278|consensus
Probab=29.49 E-value=57 Score=32.79 Aligned_cols=17 Identities=18% Similarity=0.243 Sum_probs=7.5
Q ss_pred HHHHHHHHhhhHhhhhc
Q psy4866 344 FAIILLVSIFPSTYYID 360 (537)
Q Consensus 344 ~~~~~~~~~~~~g~l~d 360 (537)
..+.+++++..++++..
T Consensus 372 ~v~~G~~agY~s~rlyk 388 (628)
T KOG1278|consen 372 FVFMGFVAGYVSARLYK 388 (628)
T ss_pred HHHHHHhhhhhhhhhHh
Confidence 33444444444444433
No 349
>PRK10692 hypothetical protein; Provisional
Probab=29.33 E-value=2.2e+02 Score=20.60 Aligned_cols=16 Identities=19% Similarity=0.152 Sum_probs=7.0
Q ss_pred hhHHHHHHHHHHHHHH
Q psy4866 133 RKWSLLMTGPITTASW 148 (537)
Q Consensus 133 rr~~l~~~~~l~~~~~ 148 (537)
||...++|.+++++|.
T Consensus 3 Rk~a~~~GN~lMglGm 18 (92)
T PRK10692 3 RKNASLLGNVLMGLGL 18 (92)
T ss_pred chhhHHHhhHHHHHHH
Confidence 3444444444444443
No 350
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=29.11 E-value=70 Score=24.37 Aligned_cols=37 Identities=24% Similarity=0.162 Sum_probs=24.3
Q ss_pred HHHHhhccchhhhHhhHHHHHHHHHHHhhccCCCCCC
Q psy4866 459 LMDKHIGMYSNFLFGGVSSLVCTVYLYYFLLETKGKT 495 (537)
Q Consensus 459 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (537)
.-.|..+|..+|++...++++.+.+.+.+.|++.-++
T Consensus 52 ~~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~~ 88 (105)
T PF10183_consen 52 EKRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQT 88 (105)
T ss_pred CcchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 4456678887777766666666666666777766443
No 351
>KOG4255|consensus
Probab=29.00 E-value=5.2e+02 Score=24.68 Aligned_cols=23 Identities=4% Similarity=-0.038 Sum_probs=12.2
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHh
Q psy4866 366 VLFLVSSAGCSLFSFIAGLYYYV 388 (537)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~ 388 (537)
++...-..+..++.+++++++..
T Consensus 80 Piif~ll~~a~v~~l~laflW~~ 102 (439)
T KOG4255|consen 80 PIIFVLLLLACVCQLGLAFLWHD 102 (439)
T ss_pred CchhHHHHHHHHHHHHHHHHHhc
Confidence 33444444446666677666543
No 352
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=28.23 E-value=2.6e+02 Score=21.08 Aligned_cols=9 Identities=0% Similarity=-0.145 Sum_probs=3.7
Q ss_pred ccCCcHHHH
Q psy4866 361 RAGRRVLFL 369 (537)
Q Consensus 361 ~~~~~~~~~ 369 (537)
+++..+.+.
T Consensus 69 ~~~t~~~~t 77 (100)
T TIGR02230 69 HYPSPFSWT 77 (100)
T ss_pred hcCCCcHHH
Confidence 444444333
No 353
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=28.01 E-value=3e+02 Score=27.51 Aligned_cols=100 Identities=10% Similarity=0.105 Sum_probs=64.4
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHhHhhhh
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYSR---SVLGLYVMRTLQGFSMAAI 174 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~ 174 (537)
+++++.++...+.+.-.+...++.++--....+.|-|-....+.-...++-+...... .....+.+-+..|+..-..
T Consensus 43 a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li 122 (451)
T COG2233 43 ALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLI 122 (451)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999886644546555444444444444444333322 3566666666666665444
Q ss_pred hhhhhhhhhccCCCcccchhhhH
Q psy4866 175 YVISPMYLGEISETSIRGTIGTL 197 (537)
Q Consensus 175 ~~~~~~~i~~~~~~~~r~~~~~~ 197 (537)
.+.....+...+||---|....+
T Consensus 123 ~~~~~~~l~rlfPPvVtG~Vi~~ 145 (451)
T COG2233 123 SPIVKIRLARLFPPVVTGPVVLV 145 (451)
T ss_pred HHHHHHHHHHhCCCceEEeEeee
Confidence 44333277788888765554433
No 354
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=27.63 E-value=2.1e+02 Score=26.03 Aligned_cols=21 Identities=10% Similarity=0.195 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q psy4866 220 NYLTYSLIIPIIFTVTFMFMP 240 (537)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~ 240 (537)
+.-+++.++.++..+.+.+++
T Consensus 116 ~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 116 WLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred HHHHHHHHHHHHHHHheeeec
Confidence 344455555555555555553
No 355
>PF08997 UCR_6-4kD: Ubiquinol-cytochrome C reductase complex, 6.4kD protein; InterPro: IPR015089 The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4 kDa protein, which may be closely linked to the iron-sulphur protein in the complex and function as an iron-sulphur protein-binding factor []. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0009055 electron carrier activity; PDB: 1NTM_K 1SQV_K 1SQB_K 1NU1_K 1SQQ_K 1BE3_K 1BGY_W 2YBB_k 2FYU_K 1L0N_K ....
Probab=27.56 E-value=1.3e+02 Score=19.82 Aligned_cols=39 Identities=5% Similarity=-0.119 Sum_probs=24.0
Q ss_pred hccCCCcccchhhhHhHHHHHHHHHHHHHHhhhhhHHHH
Q psy4866 183 GEISETSIRGTIGTLFQISCHLGILYTYVLGSELSYMNY 221 (537)
Q Consensus 183 ~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~~wr~~ 221 (537)
+....+++...+-.+.-.....|..-+-.+..+.+||.+
T Consensus 3 ~r~~G~k~~~lak~w~ps~~~~G~~~~l~lvy~TDWklI 41 (56)
T PF08997_consen 3 SRLIGPKYIELAKNWIPSAAAWGAAGGLALVYFTDWKLI 41 (56)
T ss_dssp GGG-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhhhcHHHHHHHHHhchhHHHHhhhhhhheeeecchHhh
Confidence 444555666666666666666666666666666677754
No 356
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=27.11 E-value=1.2e+02 Score=23.73 Aligned_cols=14 Identities=7% Similarity=0.114 Sum_probs=8.4
Q ss_pred HHHHhhcccCChHH
Q psy4866 232 FTVTFMFMPESPYF 245 (537)
Q Consensus 232 ~~~~~~~~~esp~~ 245 (537)
-+++++++|+.|..
T Consensus 56 Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 56 YIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHhccCCccc
Confidence 33556667877743
No 357
>PTZ00370 STEVOR; Provisional
Probab=27.01 E-value=1e+02 Score=28.22 Aligned_cols=29 Identities=10% Similarity=-0.003 Sum_probs=13.2
Q ss_pred hhhhHhhHHHHHHHHHHHhhccCCCCCCH
Q psy4866 468 SNFLFGGVSSLVCTVYLYYFLLETKGKTF 496 (537)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (537)
.+.+++.++.++..++..++++++++...
T Consensus 259 iaalvllil~vvliilYiwlyrrRK~swk 287 (296)
T PTZ00370 259 IAALVLLILAVVLIILYIWLYRRRKNSWK 287 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 33444444444444444445555444433
No 358
>PRK11715 inner membrane protein; Provisional
Probab=25.71 E-value=6.8e+02 Score=24.99 Aligned_cols=37 Identities=11% Similarity=0.138 Sum_probs=18.3
Q ss_pred HHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 346 IILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 346 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
+..+.-++.+-++.+...++++..+=.++.+++++++
T Consensus 308 iLFI~LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lF 344 (436)
T PRK11715 308 ILFIALTFAAFFLFELLKKLRIHPVQYLLVGLALVLF 344 (436)
T ss_pred HHHHHHHHHHHHHHHHhcCceecHHHHHHHHHHHHHH
Confidence 3334444445556666666655444444444444333
No 359
>PRK11715 inner membrane protein; Provisional
Probab=25.65 E-value=6.8e+02 Score=24.99 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=37.3
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHHhhcc
Q psy4866 162 VMRTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-SYMNYLTYSLIIPIIFTVTFMFM 239 (537)
Q Consensus 162 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-~wr~~~~~~~~~~~~~~~~~~~~ 239 (537)
+=-.+.|++....+....++ + +|-+...+..-++...-..++..+...+ +||....+.+.++.+-.+++..+
T Consensus 332 iQYlLVGlAl~lFYLLLLSl-S-----EHigF~~AYliAa~a~v~li~~Y~~~vl~~~k~g~~~~~~L~~LYg~Ly~lL 404 (436)
T PRK11715 332 VQYLLVGLALVLFYLLLLSL-S-----EHIGFTLAYLIAALACVLLIGFYLSAVLRSWKRGLLFAAALAALYGVLYGLL 404 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHH-H-----hhhchHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 33455566655555443332 2 3445555555444444444444444443 67777777666666655544443
No 360
>PRK03818 putative transporter; Validated
Probab=25.13 E-value=6.6e+02 Score=26.10 Aligned_cols=83 Identities=14% Similarity=0.048 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHhHhhhhhhhhhhhhh
Q psy4866 105 EGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWSLLMTGPITTASWIIAMYS-RSVLGLYVMRTLQGFSMAAIYVISPMYLG 183 (537)
Q Consensus 105 ~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 183 (537)
+.|+..-++.+|...|.-+..-+....|.+..+ ++.++..+..++..+. ....-+-..+.+-.++.+...+...+++.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 467777777777777776666665656665544 4444444433333332 22222223344444556666777888888
Q ss_pred cc-CCC
Q psy4866 184 EI-SET 188 (537)
Q Consensus 184 ~~-~~~ 188 (537)
|. ...
T Consensus 515 ~~~~~~ 520 (552)
T PRK03818 515 NLHPTS 520 (552)
T ss_pred cccCCC
Confidence 85 433
No 361
>PRK11469 hypothetical protein; Provisional
Probab=24.98 E-value=3.4e+02 Score=23.34 Aligned_cols=32 Identities=19% Similarity=0.118 Sum_probs=21.9
Q ss_pred hhhhhhHHhhhhhhhhHHHHHHHHHHHHHHHH
Q psy4866 119 LSPIPAGMLVNRIGRKWSLLMTGPITTASWII 150 (537)
Q Consensus 119 ~~~~~~G~l~dr~Grr~~l~~~~~l~~~~~~~ 150 (537)
.|..++.++.+++|+|.-++-|.++..+|.-.
T Consensus 150 ~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 150 LGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555667788888888888887777543
No 362
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=24.85 E-value=7e+02 Score=24.85 Aligned_cols=69 Identities=14% Similarity=0.185 Sum_probs=31.3
Q ss_pred HHHHHhHhhhhhhhhhhhhhccCCCcccchhhhHhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHHhhc
Q psy4866 164 RTLQGFSMAAIYVISPMYLGEISETSIRGTIGTLFQISCHLGILYTYVLGSEL-SYMNYLTYSLIIPIIFTVTFMF 238 (537)
Q Consensus 164 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~~-~wr~~~~~~~~~~~~~~~~~~~ 238 (537)
-.+.|++....+....++ + +|-+...+..-++...-.+++..+...+ +||....+.+.+.++-.+++..
T Consensus 328 Y~LVGlAl~lFYlLLLSl-S-----Ehi~F~~AYliAa~a~i~Li~~Y~~~vl~~~k~~~~~~~~L~~LY~~Ly~l 397 (430)
T PF06123_consen 328 YLLVGLALVLFYLLLLSL-S-----EHIGFNLAYLIAALACIGLISLYLSSVLKSWKRGLIFAGLLAALYGFLYVL 397 (430)
T ss_pred HHHHHHHHHHHHHHHHHH-H-----hhhchHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 344555554444333322 2 2334444444443333333333333333 5666666666665554444433
No 363
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=24.84 E-value=4.7e+02 Score=22.82 Aligned_cols=64 Identities=19% Similarity=0.157 Sum_probs=30.5
Q ss_pred ccchhhhccccCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-hhhhHhhHHHHHHHHH
Q psy4866 419 GPLFTPLLSEYFSSNMKAVSCAVINILCTTLGLISYKLFFLMDKHIGMY-SNFLFGGVSSLVCTVY 483 (537)
Q Consensus 419 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~-~~~~~~~~~~~~~~~~ 483 (537)
.|+...+..+ .+++.|-+..--......+...+....+..+.+.+|.. ..|-+.+++.+....+
T Consensus 21 ip~f~~lt~~-~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~ 85 (203)
T PF01914_consen 21 IPIFLSLTKG-MSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIAL 85 (203)
T ss_pred HHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3443344444 34444433333333333333444445555666767765 3455666655554444
No 364
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=24.79 E-value=5.6e+02 Score=23.69 Aligned_cols=37 Identities=11% Similarity=-0.045 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHhHhhhh
Q psy4866 138 LMTGPITTASWIIAMYSR-SVLGLYVMRTLQGFSMAAI 174 (537)
Q Consensus 138 ~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~ 174 (537)
+.+++++++++++..+.. +.|.+.+.-++.+++.++.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 445555655555555544 4455555556666655544
No 365
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=24.61 E-value=3.3e+02 Score=20.91 Aligned_cols=47 Identities=2% Similarity=-0.166 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccCC
Q psy4866 141 GPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEISE 187 (537)
Q Consensus 141 ~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 187 (537)
.++..+|+++.++......---.|.+.+.|.-+.+..-.++..|...
T Consensus 33 l~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 33 LIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHH
Confidence 34455555555443221100113334444444445566667777653
No 366
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=24.04 E-value=5e+02 Score=22.86 Aligned_cols=85 Identities=9% Similarity=0.053 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHHHhHhhhhhhhhhhhhhcc--CCCcccchhhhHhHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHH
Q psy4866 155 RSVLGLYVMRTLQGFSMAAIYVISPMYLGEI--SETSIRGTIGTLFQISCHLGILYTYVLGSE-LSYMNYLTYSLIIPII 231 (537)
Q Consensus 155 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~--~~~~~r~~~~~~~~~~~~~G~~i~~~l~~~-~~wr~~~~~~~~~~~~ 231 (537)
++.|.++..-++.|+......|....+..+. ..+.+-.+..-....+.++|..++--+... ++|...+++..... +
T Consensus 60 ~~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi~g~~l~~~l~~~Y~-l 138 (212)
T PF07556_consen 60 GSLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRIIFGIPLWYFLIPGYI-L 138 (212)
T ss_pred CCcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHH-H
Confidence 3678888899999999999999888775443 222222333333444444444443322222 36655444433333 3
Q ss_pred HHHHhhccc
Q psy4866 232 FTVTFMFMP 240 (537)
Q Consensus 232 ~~~~~~~~~ 240 (537)
.+++.++.|
T Consensus 139 ~~~l~~f~p 147 (212)
T PF07556_consen 139 VLILTFFSP 147 (212)
T ss_pred HHHHHHhcC
Confidence 334444554
No 367
>COG2119 Predicted membrane protein [Function unknown]
Probab=23.21 E-value=2.5e+02 Score=23.90 Aligned_cols=38 Identities=8% Similarity=0.203 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHH
Q psy4866 342 ILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFS 379 (537)
Q Consensus 342 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 379 (537)
....++..++.+.+.++++|+..|++...+.++..+..
T Consensus 141 lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 141 LGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 33556778888888999999999988877766555443
No 368
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=23.04 E-value=3.9e+02 Score=21.26 Aligned_cols=23 Identities=4% Similarity=-0.094 Sum_probs=11.5
Q ss_pred HHHHHhHhhhhhhhhhhhhhccC
Q psy4866 164 RTLQGFSMAAIYVISPMYLGEIS 186 (537)
Q Consensus 164 r~l~G~~~~~~~~~~~~~i~~~~ 186 (537)
|.+.+.|.-+.+..-.++..|..
T Consensus 69 ~~~l~tGf~GgfTTFSTf~~E~~ 91 (128)
T PRK14199 69 KLFLTTGIMGGLTTFSTFSYETI 91 (128)
T ss_pred HHHHHhHHhcccccHHHHHHHHH
Confidence 33333333344455566666665
No 369
>PRK11469 hypothetical protein; Provisional
Probab=22.80 E-value=4.9e+02 Score=22.36 Aligned_cols=34 Identities=9% Similarity=0.010 Sum_probs=18.8
Q ss_pred HHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHH
Q psy4866 348 LLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFI 381 (537)
Q Consensus 348 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 381 (537)
...|..++.++.+++++|.-++.+.++..++.-.
T Consensus 148 ~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 148 STLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455556677766666666655555443
No 370
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=22.58 E-value=3.7e+02 Score=21.85 Aligned_cols=53 Identities=6% Similarity=-0.070 Sum_probs=33.1
Q ss_pred CCCCCCChhhHHHHHHHHHHhhhhhhhHHhhhhhhhhHH-HHHHHHHHHHHHHH
Q psy4866 98 PIPMSPNEGSWVVAIIEIGNYLSPIPAGMLVNRIGRKWS-LLMTGPITTASWII 150 (537)
Q Consensus 98 ~~~~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-l~~~~~l~~~~~~~ 150 (537)
+.|+.....=....+.++.-.++.++...++|+.+.-.. .+++.++..+..++
T Consensus 66 eiGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~~~~~lg~~l~fl 119 (150)
T COG3086 66 ELGIEEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVIFGAFLGLALGFL 119 (150)
T ss_pred EEccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 566666555455556667777788888888999886443 34444444444333
No 371
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=22.53 E-value=2.8e+02 Score=19.97 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=6.4
Q ss_pred hhHHHHHHHHHHHHH
Q psy4866 133 RKWSLLMTGPITTAS 147 (537)
Q Consensus 133 rr~~l~~~~~l~~~~ 147 (537)
||...++|.+++++|
T Consensus 3 Rk~a~~~GN~lMglG 17 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLG 17 (89)
T ss_pred chhhHHHhhHHHHHh
Confidence 344444444444443
No 372
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=22.13 E-value=1.1e+03 Score=25.92 Aligned_cols=28 Identities=4% Similarity=0.005 Sum_probs=14.2
Q ss_pred hhhHHHHHHHHHHhhhhhhhHHhhhhhh
Q psy4866 105 EGSWVVAIIEIGNYLSPIPAGMLVNRIG 132 (537)
Q Consensus 105 ~~~~~~s~~~~~~~~~~~~~G~l~dr~G 132 (537)
...+...+......+..++..++.+|..
T Consensus 10 ~~~l~~~~lG~~lll~~l~s~~lkeRl~ 37 (810)
T TIGR00844 10 KAHVAYSCVGIFSSIFSLVSLFVKEKLY 37 (810)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3344444444444555555556655554
No 373
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=22.01 E-value=5.1e+02 Score=22.20 Aligned_cols=43 Identities=21% Similarity=0.262 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHHH
Q psy4866 341 SILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIAG 383 (537)
Q Consensus 341 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 383 (537)
.....+..+++.++.-.+..|.+++....+...+.++..++.+
T Consensus 34 ~~~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G 76 (186)
T PF09605_consen 34 LFMPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG 76 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh
Confidence 4455677778888888889999999988877777776665553
No 374
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=21.91 E-value=2.5e+02 Score=21.43 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=37.1
Q ss_pred ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 336 PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
+.+-....++...++.+++.++..|+..+.+.=.++..++.++..++
T Consensus 55 ~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 55 AFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred cchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 45566778888899999999999999988887777777666665544
No 375
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=21.79 E-value=4e+02 Score=23.62 Aligned_cols=68 Identities=18% Similarity=0.205 Sum_probs=34.0
Q ss_pred HhHHHHHHHHHH-HHHHhhhhhHHHHHHHHHHHHHHHHHHhhc--ccCChHHHHHhCCHHHHHHHHHhhcC
Q psy4866 197 LFQISCHLGILY-TYVLGSELSYMNYLTYSLIIPIIFTVTFMF--MPESPYFYAIKNQEGKAIESLKWLRN 264 (537)
Q Consensus 197 ~~~~~~~~G~~i-~~~l~~~~~wr~~~~~~~~~~~~~~~~~~~--~~esp~~l~~~~~~~~a~~~~~~~~~ 264 (537)
++..+..++.+. +-+++-.+++.|.+.+.+++..+.+..+.+ --|.-.|-..+++...|..++..+++
T Consensus 29 ~~ml~a~l~~~~v~v~ig~l~~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~ 99 (224)
T PF13829_consen 29 WLMLGAFLGPIAVFVLIGLLFGSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRR 99 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcC
Confidence 333333333333 333333456666666666665443333332 23344444456666667677766665
No 376
>PRK02237 hypothetical protein; Provisional
Probab=21.70 E-value=2.9e+02 Score=21.13 Aligned_cols=47 Identities=6% Similarity=0.014 Sum_probs=36.9
Q ss_pred ChhHHHHHHHHHHHHHhhhHhhhhcccCCcHHHHHhhHHHHHHHHHH
Q psy4866 336 PSDYISILFAIILLVSIFPSTYYIDRAGRRVLFLVSSAGCSLFSFIA 382 (537)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 382 (537)
+.+-....++...++.+++.++..|+...-+.=.++..++.++..++
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 34566778888899999999999999988777777777766665544
No 377
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=21.43 E-value=4.1e+02 Score=20.85 Aligned_cols=47 Identities=4% Similarity=-0.214 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhhhhhhhhhhhhhccC
Q psy4866 140 TGPITTASWIIAMYSRSVLGLYVMRTLQGFSMAAIYVISPMYLGEIS 186 (537)
Q Consensus 140 ~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 186 (537)
..++..+|+++.++......---.|.+.+.|.-+.+..-.++..|..
T Consensus 36 Tl~VNi~GsfllG~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~ 82 (119)
T PRK14230 36 NLFANWTGALLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETV 82 (119)
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHhchHhhHHHHHHHHH
Confidence 34555666666655432210001244444444444455566666655
No 378
>KOG1277|consensus
Probab=21.39 E-value=4.6e+02 Score=26.08 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=10.0
Q ss_pred HHHHHHHHhhhHhhhhcccCCc
Q psy4866 344 FAIILLVSIFPSTYYIDRAGRR 365 (537)
Q Consensus 344 ~~~~~~~~~~~~g~l~d~~~~~ 365 (537)
+++..-+....+|-+-.|.|-|
T Consensus 336 YAlTs~i~GY~~gs~Y~r~gG~ 357 (593)
T KOG1277|consen 336 YALTSPINGYVSGSFYARLGGR 357 (593)
T ss_pred HHhcccccccccceeeehhccH
Confidence 3344444444444445555543
No 379
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=20.20 E-value=8e+02 Score=23.81 Aligned_cols=41 Identities=12% Similarity=0.164 Sum_probs=28.3
Q ss_pred hccCCCcccchhhhH-hHHHHHHHHHHHHHHhhhhhHHHHHHH
Q psy4866 183 GEISETSIRGTIGTL-FQISCHLGILYTYVLGSELSYMNYLTY 224 (537)
Q Consensus 183 ~~~~~~~~r~~~~~~-~~~~~~~G~~i~~~l~~~~~wr~~~~~ 224 (537)
.|+.|.+ |...++. +..-.+.|.++||+++..+||--.++.
T Consensus 47 vDYvP~~-~~vlfghhf~sIAGaGPI~GPi~aa~~GwlPa~lW 88 (376)
T PF02554_consen 47 VDYVPTN-KWVLFGHHFASIAGAGPIVGPILAAQFGWLPALLW 88 (376)
T ss_pred CCCCCCc-hHHhhHHHHHHHhccccchHHHHHHHhcchHHHHH
Confidence 3455544 5666666 455568899999999988999844433
Done!