BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4868
(169 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270006446|gb|EFA02894.1| eyeless [Tribolium castaneum]
Length = 453
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/116 (81%), Positives = 104/116 (89%), Gaps = 3/116 (2%)
Query: 20 ELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFER 79
+LDG+ SDET + GDNSN GS++ P+DDQARLRLKRKLQRNRTSFTNDQID+LEKEFER
Sbjct: 200 DLDGINSDETNS--GDNSNAGSSIGPDDDQARLRLKRKLQRNRTSFTNDQIDSLEKEFER 257
Query: 80 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR RG+ P + P
Sbjct: 258 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR-RGAPAPAEHPG 312
>gi|160333791|ref|NP_001103907.1| eyeless [Tribolium castaneum]
gi|158187657|gb|ABW23132.1| eyeless [Tribolium castaneum]
Length = 453
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/116 (81%), Positives = 104/116 (89%), Gaps = 3/116 (2%)
Query: 20 ELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFER 79
+LDG+ SDET + GDNSN GS++ P+DDQARLRLKRKLQRNRTSFTNDQID+LEKEFER
Sbjct: 200 DLDGINSDETNS--GDNSNAGSSIGPDDDQARLRLKRKLQRNRTSFTNDQIDSLEKEFER 257
Query: 80 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR RG+ P + P
Sbjct: 258 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR-RGAPAPAEHPG 312
>gi|328719785|ref|XP_003246859.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Acyrthosiphon
pisum]
Length = 594
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 107/140 (76%), Gaps = 19/140 (13%)
Query: 17 DKIELD---GLGSDETCTTIGDNSNPGSNL-------EPEDDQARLRLKRKLQRNRTSFT 66
DK LD G+GSDETCT+IGDNSN +L +DDQARLRLKRKLQRNRTSFT
Sbjct: 258 DKKVLDLDGGMGSDETCTSIGDNSNHDGSLIGGTTGSANDDDQARLRLKRKLQRNRTSFT 317
Query: 67 NDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
NDQID+LEKEFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLR QR+
Sbjct: 318 NDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRTQRR-- 375
Query: 127 SADPTQAPNNNNNNIVNNNN 146
PN+N N ++ N
Sbjct: 376 -------PNSNQNQSMDPQN 388
>gi|328719783|ref|XP_003246858.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Acyrthosiphon
pisum]
gi|328719787|ref|XP_003246860.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Acyrthosiphon
pisum]
Length = 613
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 107/140 (76%), Gaps = 19/140 (13%)
Query: 17 DKIELD---GLGSDETCTTIGDNSNPGSNL-------EPEDDQARLRLKRKLQRNRTSFT 66
DK LD G+GSDETCT+IGDNSN +L +DDQARLRLKRKLQRNRTSFT
Sbjct: 277 DKKVLDLDGGMGSDETCTSIGDNSNHDGSLIGGTTGSANDDDQARLRLKRKLQRNRTSFT 336
Query: 67 NDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
NDQID+LEKEFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLR QR+
Sbjct: 337 NDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRTQRR-- 394
Query: 127 SADPTQAPNNNNNNIVNNNN 146
PN+N N ++ N
Sbjct: 395 -------PNSNQNQSMDPQN 407
>gi|242009922|ref|XP_002425731.1| Homeobox protein orthopedia, putative [Pediculus humanus corporis]
gi|212509632|gb|EEB12993.1| Homeobox protein orthopedia, putative [Pediculus humanus corporis]
Length = 293
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/107 (83%), Positives = 97/107 (90%), Gaps = 2/107 (1%)
Query: 19 IELDGLGSDETCTTIGDNSNPGSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
+L+G SD+ ++ GDNSN GS+ PEDDQARLRLKRKLQRNRTSFTNDQID+LEKEF
Sbjct: 14 CDLEGATSDD-ISSGGDNSNAGSSAGNPEDDQARLRLKRKLQRNRTSFTNDQIDSLEKEF 72
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 73 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 119
>gi|194768292|ref|XP_001966246.1| GF22818 [Drosophila ananassae]
gi|190618548|gb|EDV34072.1| GF22818 [Drosophila ananassae]
Length = 900
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/108 (84%), Positives = 95/108 (87%), Gaps = 2/108 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTN+QIDNLEK
Sbjct: 427 KKELDGHQSDETNSGEGENSNGGTSNVGNSEDDQARLILKRKLQRNRTSFTNEQIDNLEK 486
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR 123
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR
Sbjct: 487 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQR 534
>gi|195064323|ref|XP_001996545.1| GH24002 [Drosophila grimshawi]
gi|193892091|gb|EDV90957.1| GH24002 [Drosophila grimshawi]
Length = 797
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + GDNSN G SN+ EDDQARL LKRKLQRNRTSFTN+QID+LEK
Sbjct: 454 KKELDGHQSDETGSGEGDNSNGGASNIGTSEDDQARLILKRKLQRNRTSFTNEQIDSLEK 513
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 514 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 562
>gi|340728299|ref|XP_003402463.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
Length = 826
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 82/106 (77%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Query: 20 ELDGLGSDETCTTIGDNSNPGS-NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
EL+G + + GDNSN GS + +DDQARLRLKRKLQRNRTSF+N+QID LEKEFE
Sbjct: 503 ELEGGAHSDETNSGGDNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFE 562
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
RTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLR QR+
Sbjct: 563 RTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRTQRR 608
>gi|263359659|gb|ACY70495.1| hypothetical protein DVIR88_6g0032 [Drosophila virilis]
Length = 909
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 92/109 (84%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + GDNSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 454 KKELDGHQSDETGSGEGDNSNGGASNIGTSEDDQARLILKRKLQRNRTSFTNDQIDSLEK 513
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 514 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 562
>gi|195402299|ref|XP_002059744.1| eyeless [Drosophila virilis]
gi|194155958|gb|EDW71142.1| eyeless [Drosophila virilis]
Length = 906
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 92/109 (84%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + GDNSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 454 KKELDGHQSDETGSGEGDNSNGGASNIGTSEDDQARLILKRKLQRNRTSFTNDQIDSLEK 513
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 514 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 562
>gi|194913493|ref|XP_001982710.1| GG16399 [Drosophila erecta]
gi|190647926|gb|EDV45229.1| GG16399 [Drosophila erecta]
Length = 900
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 430 KKELDGHQSDETGSGEGENSNGGASNIGNNEDDQARLILKRKLQRNRTSFTNDQIDSLEK 489
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 490 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 538
>gi|62473159|ref|NP_001014693.1| eyeless, isoform D [Drosophila melanogaster]
gi|61677928|gb|AAX52512.1| eyeless, isoform D [Drosophila melanogaster]
Length = 898
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 429 KKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEK 488
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 489 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 537
>gi|24638702|ref|NP_524628.2| eyeless, isoform A [Drosophila melanogaster]
gi|7304285|gb|AAF59318.1| eyeless, isoform A [Drosophila melanogaster]
Length = 838
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 369 KKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEK 428
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 429 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 477
>gi|641810|emb|CAA56038.1| transcription factor [Drosophila melanogaster]
Length = 838
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 369 KKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEK 428
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 429 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 477
>gi|195469385|ref|XP_002099618.1| GE14559 [Drosophila yakuba]
gi|194185719|gb|EDW99330.1| GE14559 [Drosophila yakuba]
Length = 898
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 428 KKELDGHQSDETGSGEGENSNGGASNIGNNEDDQARLILKRKLQRNRTSFTNDQIDSLEK 487
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 488 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 536
>gi|12643549|sp|O18381.3|PAX6_DROME RecName: Full=Paired box protein Pax-6; AltName: Full=Protein
eyeless
Length = 857
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 388 KKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEK 447
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 448 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 496
>gi|62473168|ref|NP_001014694.1| eyeless, isoform C [Drosophila melanogaster]
gi|61677929|gb|AAX52513.1| eyeless, isoform C [Drosophila melanogaster]
Length = 857
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 388 KKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEK 447
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 448 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 496
>gi|195354419|ref|XP_002043695.1| ey [Drosophila sechellia]
gi|194128883|gb|EDW50926.1| ey [Drosophila sechellia]
Length = 899
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 429 KKELDGHQSDETGSGEGENSNGGASNIGNNEDDQARLILKRKLQRNRTSFTNDQIDSLEK 488
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 489 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 537
>gi|350403203|ref|XP_003486730.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
Length = 796
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 82/106 (77%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Query: 20 ELDGLGSDETCTTIGDNSNPGS-NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
EL+G + + GDNSN GS + +DDQARLRLKRKLQRNRTSF+N+QID LEKEFE
Sbjct: 467 ELEGGAHSDETNSGGDNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFE 526
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
RTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLR QR+
Sbjct: 527 RTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRTQRR 572
>gi|195450767|ref|XP_002072624.1| GK13702 [Drosophila willistoni]
gi|194168709|gb|EDW83610.1| GK13702 [Drosophila willistoni]
Length = 951
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 90/109 (82%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTN+QID+LEK
Sbjct: 487 KKELDGHQSDETGSGEGENSNGGVSNIGNSEDDQARLILKRKLQRNRTSFTNEQIDSLEK 546
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 547 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 595
>gi|328779009|ref|XP_001120031.2| PREDICTED: hypothetical protein LOC724238 [Apis mellifera]
Length = 897
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 82/106 (77%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Query: 20 ELDGLGSDETCTTIGDNSNPGS-NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
EL+G + + GDNSN GS + +DDQARLRLKRKLQRNRTSF+N+QID LEKEFE
Sbjct: 567 ELEGGAHSDETNSGGDNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFE 626
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
RTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLR QR+
Sbjct: 627 RTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRTQRR 672
>gi|357609290|gb|EHJ66384.1| eyeless [Danaus plexippus]
Length = 334
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/103 (81%), Positives = 93/103 (90%), Gaps = 3/103 (2%)
Query: 21 LDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERT 80
L+ L SDET + GDNSN GS+ ++D ARLRLKRKLQRNRTSFTN+QIDNLE+EFERT
Sbjct: 105 LEALHSDETGS--GDNSNAGSSGA-DEDAARLRLKRKLQRNRTSFTNEQIDNLEREFERT 161
Query: 81 HYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR 123
HYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK+R+QR
Sbjct: 162 HYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKIRSQR 204
>gi|24638704|ref|NP_726607.1| eyeless, isoform B [Drosophila melanogaster]
gi|22759376|gb|AAN06513.1| eyeless, isoform B [Drosophila melanogaster]
gi|40882541|gb|AAR96182.1| GH01157p [Drosophila melanogaster]
gi|220952578|gb|ACL88832.1| ey-PB [synthetic construct]
Length = 624
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 91/109 (83%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTNDQID+LEK
Sbjct: 155 KKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEK 214
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 215 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 263
>gi|198462210|ref|XP_001352371.2| ey [Drosophila pseudoobscura pseudoobscura]
gi|198139686|gb|EAL29360.2| ey [Drosophila pseudoobscura pseudoobscura]
Length = 896
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 6/116 (5%)
Query: 15 TTDKI----ELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTND 68
TTD I ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTN+
Sbjct: 420 TTDDILLKKELDGHQSDETGSGEGENSNGGASNIGNSEDDQARLILKRKLQRNRTSFTNE 479
Query: 69 QIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 480 QIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 535
>gi|195172576|ref|XP_002027073.1| ey [Drosophila persimilis]
gi|194112851|gb|EDW34894.1| ey [Drosophila persimilis]
Length = 896
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 93/116 (80%), Positives = 99/116 (85%), Gaps = 6/116 (5%)
Query: 15 TTDKI----ELDGLGSDETCTTIGDNSNPG-SNL-EPEDDQARLRLKRKLQRNRTSFTND 68
TTD I ELDG SDET + G+NSN G SN+ EDDQARL LKRKLQRNRTSFTN+
Sbjct: 420 TTDDILLKKELDGHQSDETGSGEGENSNGGASNIGNSEDDQARLILKRKLQRNRTSFTNE 479
Query: 69 QIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 480 QIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 535
>gi|242006165|ref|XP_002423925.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
gi|212507188|gb|EEB11187.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
Length = 509
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/134 (66%), Positives = 101/134 (75%), Gaps = 4/134 (2%)
Query: 24 LGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYP 83
LGS T NS GS+ + ED Q RLRLKRKLQRNRTSFTN+QID+LEKEFERTHYP
Sbjct: 264 LGSHHGENTSDGNSEHGSSGD-EDSQLRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 322
Query: 84 DVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNI-V 142
DVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLRNQR+ + +P +P ++ + +
Sbjct: 323 DVFARERLAEKIGLPEARIQVWFSNRRAKWRREEKLRNQRR--TVEPVVSPPTPSSRLPL 380
Query: 143 NNNNNSSDGCTPSP 156
N NS G P P
Sbjct: 381 NTGFNSMYGSIPQP 394
>gi|383862169|ref|XP_003706556.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
Length = 552
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/106 (77%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Query: 20 ELDGLGSDETCTTIGDNSNPGS-NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
EL+G + + GDNSN GS + +DDQARLRLKRKLQRNRTSF+N+QID LEKEFE
Sbjct: 231 ELEGGAHSDETNSGGDNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFE 290
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
RTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLR QR+
Sbjct: 291 RTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRTQRR 336
>gi|195133952|ref|XP_002011402.1| GI14081 [Drosophila mojavensis]
gi|193912025|gb|EDW10892.1| GI14081 [Drosophila mojavensis]
Length = 891
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 89/109 (81%), Positives = 95/109 (87%), Gaps = 2/109 (1%)
Query: 18 KIELDGLGSDETCTTIGDNSNP-GSNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
K ELDG SDET + G+NSN SNL EDDQARL LKRKLQRNRTSFTN+QID+LEK
Sbjct: 456 KKELDGHQSDETGSGEGENSNGCASNLGATEDDQARLILKRKLQRNRTSFTNEQIDSLEK 515
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLR+QR+
Sbjct: 516 EFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRSQRR 564
>gi|270006382|gb|EFA02830.1| twin of eyeless [Tribolium castaneum]
Length = 524
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/115 (71%), Positives = 89/115 (77%), Gaps = 7/115 (6%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSFTN+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 300 EDSQLRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 359
Query: 106 FSNRRAKWRREEKLRNQR----QRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSP 156
FSNRRAKWRREEKLRNQR Q G+ P P++ +N+ NS P P
Sbjct: 360 FSNRRAKWRREEKLRNQRRAVDQVGAVSP---PSSAGRLPINSGFNSMYSSIPQP 411
>gi|345492062|ref|XP_001601318.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
Length = 593
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 82/106 (77%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Query: 20 ELDGLGSDETCTTIGDNSNPGS-NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
EL+G + + GDNSN GS + +DDQARLRLKRKLQRNRTSF+N+QID LEKEFE
Sbjct: 230 ELEGGAHSDETNSGGDNSNAGSVSGGADDDQARLRLKRKLQRNRTSFSNEQIDALEKEFE 289
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
RTHYPDVFARERLA KIGLPEARIQVWFSNRRAKWRREEKLR QR+
Sbjct: 290 RTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRTQRR 335
>gi|402590573|gb|EJW84503.1| homeobox domain-containing protein, partial [Wuchereria bancrofti]
Length = 234
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 86/108 (79%), Gaps = 2/108 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED AR+RLKRKLQRNRTSF+ +QI+ LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 11 EDTAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARIQVW 70
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCT 153
FSNRRAKWRREEKLRNQ++ D AP N+N+ N+ S G T
Sbjct: 71 FSNRRAKWRREEKLRNQKRPPGMDTAMAP--ANSNVSANSAAGSSGST 116
>gi|170588511|ref|XP_001899017.1| Homeobox domain containing protein [Brugia malayi]
gi|158593230|gb|EDP31825.1| Homeobox domain containing protein [Brugia malayi]
Length = 243
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/108 (70%), Positives = 86/108 (79%), Gaps = 2/108 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED AR+RLKRKLQRNRTSF+ +QI+ LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 18 EDTAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARIQVW 77
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCT 153
FSNRRAKWRREEKLRNQ++ D AP ++N+ N+ S G T
Sbjct: 78 FSNRRAKWRREEKLRNQKRPPGMDTAMAP--ASSNVSANSAAGSSGST 123
>gi|195450696|ref|XP_002072593.1| GK13683 [Drosophila willistoni]
gi|194168678|gb|EDW83579.1| GK13683 [Drosophila willistoni]
Length = 552
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 85/102 (83%), Gaps = 4/102 (3%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSFTN+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 253 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 312
Query: 106 FSNRRAKWRREEKLRNQRQR----GSADPTQAPNNNNNNIVN 143
FSNRRAKWRREEKLR QR+ GS+ T NN N ++ +
Sbjct: 313 FSNRRAKWRREEKLRTQRRSVDNVGSSGRTSTNNNPNPSVTS 354
>gi|393906366|gb|EJD74258.1| hypothetical protein LOAG_18403 [Loa loa]
Length = 290
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 87/110 (79%), Gaps = 2/110 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED AR+RLKRKLQRNRTSF+ +QI+ LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 60 EDAAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARIQVW 119
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPS 155
FSNRRAKWRREEKLRNQ++ D T A N+NI N+ S G T S
Sbjct: 120 FSNRRAKWRREEKLRNQKRPPGMDTTMA--TANSNISANSAAGSSGSTQS 167
>gi|195064095|ref|XP_001996496.1| GH23963 [Drosophila grimshawi]
gi|193892042|gb|EDV90908.1| GH23963 [Drosophila grimshawi]
Length = 545
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 89/125 (71%), Gaps = 17/125 (13%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSFTN+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 254 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 313
Query: 106 FSNRRAKWRREEKLRNQRQ-----------------RGSADPTQAPNNNNNNIVNNNNNS 148
FSNRRAKWRREEKLR QR+ GS+ PT A NN+ +
Sbjct: 314 FSNRRAKWRREEKLRTQRRSVDNVGGTSGRTSTNNPSGSSVPTNATTANNSTSGIGTSAG 373
Query: 149 SDGCT 153
S+G +
Sbjct: 374 SEGAS 378
>gi|195134022|ref|XP_002011437.1| GI14042 [Drosophila mojavensis]
gi|193912060|gb|EDW10927.1| GI14042 [Drosophila mojavensis]
Length = 569
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 84/98 (85%), Gaps = 6/98 (6%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSFTN+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 255 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 314
Query: 106 FSNRRAKWRREEKLRNQRQR------GSADPTQAPNNN 137
FSNRRAKWRREEKLR QR+ G+ + ++A +NN
Sbjct: 315 FSNRRAKWRREEKLRTQRRSVDNVGGGAVNSSRASSNN 352
>gi|195355670|ref|XP_002044313.1| GM13021 [Drosophila sechellia]
gi|194130600|gb|EDW52643.1| GM13021 [Drosophila sechellia]
Length = 543
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 90/116 (77%), Gaps = 8/116 (6%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 253 EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVW 312
Query: 106 FSNRRAKWRREEKLRNQRQR-----GSADPTQAPN---NNNNNIVNNNNNSSDGCT 153
FSNRRAKWRREEK+R QR+ GS P+ A N ++ V +NNS+ G
Sbjct: 313 FSNRRAKWRREEKMRTQRRSADTVDGSGRPSTANNPSVTTASSSVATSNNSTPGIV 368
>gi|380020309|ref|XP_003694031.1| PREDICTED: paired box protein Pax-6-like [Apis florea]
Length = 564
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 317 EDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 376
Query: 106 FSNRRAKWRREEKLRNQRQRGSAD 129
FSNRRAKWRREEKLRNQR R + D
Sbjct: 377 FSNRRAKWRREEKLRNQR-RAAVD 399
>gi|195402191|ref|XP_002059690.1| GJ13300 [Drosophila virilis]
gi|194155904|gb|EDW71088.1| GJ13300 [Drosophila virilis]
gi|263359635|gb|ACY70471.1| hypothetical protein DVIR88_6g0008 [Drosophila virilis]
Length = 549
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 81/99 (81%), Gaps = 2/99 (2%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSFTN+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 254 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 313
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNN 144
FSNRRAKWRREEKLR QR+ S D N+ NN
Sbjct: 314 FSNRRAKWRREEKLRTQRR--SVDNVGGGGNSGRTSTNN 350
>gi|345496344|ref|XP_001602823.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
Length = 522
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 265 EDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 324
Query: 106 FSNRRAKWRREEKLRNQRQRGSAD 129
FSNRRAKWRREEKLRNQR R + D
Sbjct: 325 FSNRRAKWRREEKLRNQR-RAAVD 347
>gi|78370180|gb|ABB43131.1| Pax-6 [Daphnia pulex]
Length = 469
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/79 (92%), Positives = 78/79 (98%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+DDQARLRLKRKLQRNRTSFTN+QI++LEKEFERTHYPDVFARERLAAKIG PEARIQVW
Sbjct: 259 DDDQARLRLKRKLQRNRTSFTNEQIESLEKEFERTHYPDVFARERLAAKIGSPEARIQVW 318
Query: 106 FSNRRAKWRREEKLRNQRQ 124
FSNRRAKWRREEKLRNQR+
Sbjct: 319 FSNRRAKWRREEKLRNQRR 337
>gi|194913445|ref|XP_001982698.1| GG16402 [Drosophila erecta]
gi|190647914|gb|EDV45217.1| GG16402 [Drosophila erecta]
Length = 543
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 91/114 (79%), Gaps = 8/114 (7%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 253 EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVW 312
Query: 106 FSNRRAKWRREEKLRNQRQRG-SADPTQAPNNNNN-------NIVNNNNNSSDG 151
FSNRRAKWRREEK+R QR+ + D + P+ +NN + V +NNS+ G
Sbjct: 313 FSNRRAKWRREEKMRTQRRSADTVDGSGRPSTSNNPSGTTASSSVATSNNSNPG 366
>gi|340715062|ref|XP_003396039.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
gi|350414727|ref|XP_003490400.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
Length = 514
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 267 EDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 326
Query: 106 FSNRRAKWRREEKLRNQRQRGSAD 129
FSNRRAKWRREEKLRNQR R + D
Sbjct: 327 FSNRRAKWRREEKLRNQR-RAAVD 349
>gi|195175466|ref|XP_002028472.1| GL17563 [Drosophila persimilis]
gi|198462201|ref|XP_002135664.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
gi|194103225|gb|EDW25268.1| GL17563 [Drosophila persimilis]
gi|198139762|gb|EDY70832.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
Length = 546
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 2/84 (2%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSFTN+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 251 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 310
Query: 106 FSNRRAKWRREEKLRNQRQRGSAD 129
FSNRRAKWRREEK+R QR+ SAD
Sbjct: 311 FSNRRAKWRREEKMRTQRR--SAD 332
>gi|312080137|ref|XP_003142472.1| hypothetical protein LOAG_06889 [Loa loa]
Length = 127
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 87/110 (79%), Gaps = 2/110 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED AR+RLKRKLQRNRTSF+ +QI+ LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 20 EDAAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARIQVW 79
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPS 155
FSNRRAKWRREEKLRNQ++ D T A N+NI N+ S G T S
Sbjct: 80 FSNRRAKWRREEKLRNQKRPPGMDTTMA--TANSNISANSAAGSSGSTQS 127
>gi|383859947|ref|XP_003705453.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
Length = 628
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 381 EDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 440
Query: 106 FSNRRAKWRREEKLRNQRQRGSAD 129
FSNRRAKWRREEKLRNQR R + D
Sbjct: 441 FSNRRAKWRREEKLRNQR-RAAVD 463
>gi|357630890|gb|EHJ78711.1| twin of eyeless [Danaus plexippus]
Length = 409
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/78 (93%), Positives = 75/78 (96%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSFTNDQID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 213 EDSQMRLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 272
Query: 106 FSNRRAKWRREEKLRNQR 123
FSNRRAKWRREEKLR+QR
Sbjct: 273 FSNRRAKWRREEKLRSQR 290
>gi|332022174|gb|EGI62491.1| Paired box protein Pax-6 [Acromyrmex echinatior]
Length = 631
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/88 (85%), Positives = 79/88 (89%), Gaps = 1/88 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 382 EDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 441
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQA 133
FSNRRAKWRREEKLRNQR R + D A
Sbjct: 442 FSNRRAKWRREEKLRNQR-RAAVDQVVA 468
>gi|307189169|gb|EFN73617.1| Paired box protein Pax-6 [Camponotus floridanus]
Length = 516
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 267 EDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 326
Query: 106 FSNRRAKWRREEKLRNQRQRGSAD 129
FSNRRAKWRREEKLRNQR R + D
Sbjct: 327 FSNRRAKWRREEKLRNQR-RAAVD 349
>gi|307211180|gb|EFN87393.1| Paired box protein Pax-6 [Harpegnathos saltator]
Length = 506
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 260 EDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 319
Query: 106 FSNRRAKWRREEKLRNQRQRGSAD 129
FSNRRAKWRREEKLRNQR R + D
Sbjct: 320 FSNRRAKWRREEKLRNQR-RAAVD 342
>gi|2495315|sp|P55864.1|PAX6_XENLA RecName: Full=Paired box protein Pax-6
gi|1685056|gb|AAB36683.1| Pax6 [Xenopus laevis]
Length = 422
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Query: 33 IGDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARER
Sbjct: 183 VGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 242
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
LAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 243 LAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|1488322|gb|AAB05932.1| Xpax6 [Xenopus laevis]
Length = 422
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Query: 33 IGDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARER
Sbjct: 183 VGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 242
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
LAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 243 LAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|1685047|gb|AAB36681.1| paired-type homeodomain Pax-6 protein [Xenopus laevis]
Length = 453
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Query: 33 IGDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARER
Sbjct: 214 VGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 273
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
LAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 274 LAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 317
>gi|259013350|ref|NP_001158383.1| paired box 6 [Saccoglossus kowalevskii]
gi|32307795|gb|AAP79294.1| pax6 [Saccoglossus kowalevskii]
Length = 457
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 110/162 (67%), Gaps = 9/162 (5%)
Query: 7 PLETKRFNTTDKIELDGLGSDETCTTIGDNSNP--GSNLEPEDD--QARLRLKRKLQRNR 62
P+ T T+ +GL + G+ S+ G++ +DD QARLRLKRKLQRNR
Sbjct: 181 PISTNGTTPTNTSSTEGLVCSKKDIDAGEISDHKDGTDASGDDDEAQARLRLKRKLQRNR 240
Query: 63 TSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
TSFT QI+ LEKEFERTHYPDVFARERLA KI LPEARIQVWFSNRRAKWRREEKLRNQ
Sbjct: 241 TSFTQYQIETLEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKLRNQ 300
Query: 123 RQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSMDP 164
R++ S+ PT +++++ N++ ++ P P P M P
Sbjct: 301 RRQMSSAPT-----SSSHLPINSSFTNSVYQPIPQPTTPMVP 337
>gi|194770706|ref|XP_001967430.1| GF21877 [Drosophila ananassae]
gi|190618406|gb|EDV33930.1| GF21877 [Drosophila ananassae]
Length = 545
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/79 (89%), Positives = 75/79 (94%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSFTN+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 253 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVW 312
Query: 106 FSNRRAKWRREEKLRNQRQ 124
FSNRRAKWRREEK+R QR+
Sbjct: 313 FSNRRAKWRREEKMRTQRR 331
>gi|195469409|ref|XP_002099630.1| GE14563 [Drosophila yakuba]
gi|194185731|gb|EDW99342.1| GE14563 [Drosophila yakuba]
Length = 543
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 253 EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVW 312
Query: 106 FSNRRAKWRREEKLRNQRQRG-SADPTQAPNNNNN 139
FSNRRAKWRREEK+R QR+ + D + P+ NN
Sbjct: 313 FSNRRAKWRREEKMRTQRRSADTVDGSGRPSTANN 347
>gi|498022|gb|AAA40109.1| oculorhombin [Mus musculus]
Length = 284
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 90/107 (84%), Gaps = 2/107 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 48 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 107
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P +++
Sbjct: 108 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPTSSS 154
>gi|4883932|gb|AAD31712.1|AF134350_1 transcription factor Toy [Drosophila melanogaster]
Length = 543
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 90/115 (78%), Gaps = 8/115 (6%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 253 EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVW 312
Query: 106 FSNRRAKWRREEKLRNQRQRGSADP------TQAPNNNNNNIVNNNNNSSDGCTP 154
FSNRRAKWRREEK+R QR+ SAD T NN + +++ +S+ TP
Sbjct: 313 FSNRRAKWRREEKMRTQRR--SADTVDGSGRTSTANNPSGTTASSSVATSNNSTP 365
>gi|45549245|ref|NP_524638.3| twin of eyeless, isoform A [Drosophila melanogaster]
gi|15291285|gb|AAK92911.1| GH14454p [Drosophila melanogaster]
gi|45444822|gb|AAF59395.4| twin of eyeless, isoform A [Drosophila melanogaster]
gi|220942324|gb|ACL83705.1| toy-PA [synthetic construct]
gi|220952546|gb|ACL88816.1| toy-PA [synthetic construct]
Length = 543
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 90/115 (78%), Gaps = 8/115 (6%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 253 EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVW 312
Query: 106 FSNRRAKWRREEKLRNQRQRGSADP------TQAPNNNNNNIVNNNNNSSDGCTP 154
FSNRRAKWRREEK+R QR+ SAD T NN + +++ +S+ TP
Sbjct: 313 FSNRRAKWRREEKMRTQRR--SADTVDGSGRTSTANNPSGTTASSSVATSNNSTP 365
>gi|444301236|gb|AGD98731.1| paired box 6.2 [Callorhinchus milii]
Length = 302
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 95/123 (77%), Gaps = 5/123 (4%)
Query: 21 LDGLGSDETCTTI---GDN-SNPGSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEK 75
+ G G+ + C + GDN S+ +N E D+ Q RL+LKRKLQRNRTSFT DQI+ LEK
Sbjct: 52 VAGQGNADGCQQLEVGGDNDSSVAANGEDSDESQIRLQLKRKLQRNRTSFTQDQIEALEK 111
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
EFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ + P
Sbjct: 112 EFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQACNGSSHVPI 171
Query: 136 NNN 138
N++
Sbjct: 172 NSS 174
>gi|8132381|gb|AAF73270.1| paired domain transcription factor variant B [Xenopus laevis]
Length = 390
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Query: 33 IGDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARER
Sbjct: 197 VGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 256
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
LAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 257 LAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|288557282|ref|NP_001165666.1| paired box protein Pax-6 [Xenopus laevis]
gi|8132379|gb|AAF73269.1|AF154553_1 paired domain transcription factor variant B [Xenopus laevis]
Length = 393
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Query: 33 IGDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARER
Sbjct: 183 VGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 242
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
LAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 243 LAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|15080680|dbj|BAB62531.1| paired box transcription factor Pax6 [Lethenteron camtschaticum]
Length = 448
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 82/93 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLA+KI LPEARIQVW
Sbjct: 231 EDAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLASKIDLPEARIQVW 290
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
FSNRRAKWRREEKLRNQR++ S P+ P N++
Sbjct: 291 FSNRRAKWRREEKLRNQRRQASNAPSHIPINSS 323
>gi|324508780|gb|ADY43703.1| Paired box protein Pax-6 [Ascaris suum]
Length = 470
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 86/106 (81%), Gaps = 3/106 (2%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED AR+RLKRKLQRNRTSF+ +QI+ LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 202 EDAAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARIQVW 261
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDG 151
FSNRRAKWRREEKLRNQ++ G D + P + N+ +NN S G
Sbjct: 262 FSNRRAKWRREEKLRNQKRPG-MDASMGP--GSANVGSNNTAGSSG 304
>gi|317419326|emb|CBN81363.1| Paired box gene 6b [Dicentrarchus labrax]
Length = 276
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 91/119 (76%), Gaps = 5/119 (4%)
Query: 44 EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ 103
E E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLA KI LPEARIQ
Sbjct: 63 EGEESQLRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEARIQ 122
Query: 104 VWFSNRRAKWRREEKLRNQRQRG---SADPTQAP--NNNNNNIVNNNNNSSDGCTPSPA 157
VWFSNRRAKWRREEKLRNQR+ G S +QAP + N ++ + + SS G S A
Sbjct: 123 VWFSNRRAKWRREEKLRNQRRSGGVTSCSQSQAPLTTSFNTSVYHQQHGSSSGSMLSQA 181
>gi|117650666|gb|ABK54278.1| Pax6 [Branchiostoma belcheri]
Length = 461
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 14 NTTDKIELDGLGSDETCTTIG-DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDN 72
N T K E DG + + T G + GSN + ++ QARLRLKRKLQRNRTSFT +QI+
Sbjct: 183 NVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEA 242
Query: 73 LEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRN
Sbjct: 243 LEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 291
>gi|3204110|emb|CAA11364.1| Pax6 [Branchiostoma floridae]
Length = 483
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 14 NTTDKIELDGLGSDETCTTIG-DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDN 72
N T K E DG + + T G + GSN + ++ QARLRLKRKLQRNRTSFT +QI+
Sbjct: 205 NVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEA 264
Query: 73 LEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRN
Sbjct: 265 LEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 313
>gi|345305654|ref|XP_003428362.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6-like
[Ornithorhynchus anatinus]
Length = 704
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 99/140 (70%), Gaps = 5/140 (3%)
Query: 1 MDYLEKPLETKRFNTTDKIELDGLGSDETCTTIGDNSNP-GSNLEPEDD-QARLRLKRKL 58
M+ P + I DG S E G+N+N SN E D+ Q RL+LKRKL
Sbjct: 436 MEGCPGPRSKVWIDCPAPIIPDGCSSQEGG---GENTNSISSNGEDSDEAQMRLQLKRKL 492
Query: 59 QRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
QRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEK
Sbjct: 493 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEK 552
Query: 119 LRNQRQRGSADPTQAPNNNN 138
LRNQR++ S P+ P +++
Sbjct: 553 LRNQRRQASTTPSHIPISSS 572
>gi|444301229|gb|AGD98725.1| paired box 6.1 [Callorhinchus milii]
Length = 436
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 88/110 (80%), Gaps = 5/110 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
GS E +I NS+ + ++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPD
Sbjct: 196 GSAENTNSINSNSD-----DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPD 250
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 251 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|355566635|gb|EHH23014.1| hypothetical protein EGK_06384 [Macaca mulatta]
Length = 361
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 139 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 198
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 199 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 241
>gi|3204112|emb|CAA11365.1| Pax6 [Branchiostoma floridae]
Length = 431
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 14 NTTDKIELDGLGSDETCTTIG-DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDN 72
N T K E DG + + T G + GSN + ++ QARLRLKRKLQRNRTSFT +QI+
Sbjct: 174 NVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEA 233
Query: 73 LEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRN
Sbjct: 234 LEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 282
>gi|115501613|gb|ABI98854.1| paired box 6 transcript variant 9 [Columba livia]
Length = 369
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 131 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 190
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 191 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 233
>gi|115501605|gb|ABI98850.1| paired box 6 transcript variant 5 [Columba livia]
Length = 400
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 162 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 221
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 222 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 264
>gi|74224022|dbj|BAE23875.1| unnamed protein product [Mus musculus]
gi|119588641|gb|EAW68235.1| paired box gene 6 (aniridia, keratitis), isoform CRA_b [Homo
sapiens]
Length = 286
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 48 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 107
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 108 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 150
>gi|3204114|emb|CAA11366.1| Pax6 [Branchiostoma floridae]
Length = 439
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 14 NTTDKIELDGLGSDETCTTIG-DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDN 72
N T K E DG + + T G + GSN + ++ QARLRLKRKLQRNRTSFT +QI+
Sbjct: 182 NVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEA 241
Query: 73 LEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRN
Sbjct: 242 LEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 290
>gi|321464778|gb|EFX75784.1| twin of eyeless [Daphnia pulex]
Length = 473
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/79 (91%), Positives = 76/79 (96%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSFTN+QI++LEKEFERTHYPDVFARERLA KIGLPEARIQVW
Sbjct: 240 EDPQMRLRLKRKLQRNRTSFTNEQIESLEKEFERTHYPDVFARERLAEKIGLPEARIQVW 299
Query: 106 FSNRRAKWRREEKLRNQRQ 124
FSNRRAKWRREEKLRNQR+
Sbjct: 300 FSNRRAKWRREEKLRNQRR 318
>gi|115501609|gb|ABI98852.1| paired box 6 transcript variant 7 [Columba livia]
Length = 386
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 148 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 207
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 208 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 250
>gi|42592306|emb|CAF29075.1| putative pax6 isoform 5a [Rattus norvegicus]
Length = 436
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|306754627|gb|ADN04686.1| Pax6 [Rattus norvegicus]
Length = 434
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|115501621|gb|ABI98858.1| paired box 6 transcript variant 13 [Columba livia]
gi|115501625|gb|ABI98860.1| paired box 6 transcript variant 15 [Columba livia]
gi|115501629|gb|ABI98862.1| paired box 6 transcript variant 17 [Columba livia]
gi|115501633|gb|ABI98864.1| paired box 6 transcript variant 19 [Columba livia]
gi|115501637|gb|ABI98866.1| paired box 6 transcript variant 21 [Columba livia]
gi|115501641|gb|ABI98868.1| paired box 6 transcript variant 23 [Columba livia]
gi|115501645|gb|ABI98870.1| paired box 6 transcript variant 25 [Columba livia]
gi|115501649|gb|ABI98872.1| paired box 6 transcript variant 27 [Columba livia]
gi|115501653|gb|ABI98874.1| paired box 6 transcript variant 29 [Columba livia]
gi|115501657|gb|ABI98876.1| paired box 6 transcript variant 31 [Columba livia]
gi|115501661|gb|ABI98878.1| paired box 6 transcript variant 33 [Columba livia]
gi|115501665|gb|ABI98880.1| paired box 6 transcript variant 35 [Columba livia]
gi|115501669|gb|ABI98882.1| paired box 6 transcript variant 37 [Columba livia]
Length = 286
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 48 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 107
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 108 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 150
>gi|3204118|emb|CAA11368.1| Pax6 [Branchiostoma floridae]
Length = 463
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 14 NTTDKIELDGLGSDETCTTIG-DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDN 72
N T K E DG + + T G + GSN + ++ QARLRLKRKLQRNRTSFT +QI+
Sbjct: 182 NVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEA 241
Query: 73 LEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRN
Sbjct: 242 LEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 290
>gi|332211111|ref|XP_003254659.1| PREDICTED: paired box protein Pax-6 [Nomascus leucogenys]
Length = 458
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 220 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 279
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 280 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 322
>gi|786328|gb|AAB32671.1| Pax-6 [Rattus sp.]
gi|446399|prf||1911405A PAX-6 gene
Length = 269
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 91 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 150
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDG 151
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P + N + N S
Sbjct: 151 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISWNKSSFWYPNFYSFW 210
Query: 152 CTPSPAPQVSMD 163
C V +
Sbjct: 211 CIICKWALVCYN 222
>gi|62087934|dbj|BAD92414.1| paired box gene 6 isoform a variant [Homo sapiens]
Length = 385
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 147 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 206
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 207 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 249
>gi|71987664|ref|NP_001024572.1| Protein VAB-3, isoform c [Caenorhabditis elegans]
gi|903952|gb|AAC47542.1| MAB-18 [Caenorhabditis elegans]
gi|14530407|emb|CAC42288.1| Protein VAB-3, isoform c [Caenorhabditis elegans]
gi|1583408|prf||2120400B mab-18 gene
Length = 296
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 92/127 (72%), Gaps = 9/127 (7%)
Query: 4 LEKPLETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQA-RLRLKRKLQRNR 62
++ PL T+R +T K G + D P EPEDD A R+RLKRKLQRNR
Sbjct: 11 IKAPLPTRRASTIRKTARVG-----KFSPYEDQKPP---TEPEDDAAARMRLKRKLQRNR 62
Query: 63 TSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
TSFT QI++LEKEFERTHYPDVFARERLA KI LPEARIQVWFSNRRAKWRREEK+RN+
Sbjct: 63 TSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNK 122
Query: 123 RQRGSAD 129
R G+ D
Sbjct: 123 RSSGTMD 129
>gi|126723718|ref|NP_001075686.1| paired box protein Pax-6 [Oryctolagus cuniculus]
gi|77547037|gb|ABA90485.1| paired box protein PAX6 isoform b [Oryctolagus cuniculus]
Length = 436
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|440910049|gb|ELR59881.1| Paired box protein Pax-6, partial [Bos grunniens mutus]
Length = 436
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|355752241|gb|EHH56361.1| hypothetical protein EGM_05752, partial [Macaca fascicularis]
Length = 436
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|149022829|gb|EDL79723.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
gi|149022831|gb|EDL79725.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
Length = 470
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 232 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 291
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 292 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 334
>gi|7305369|ref|NP_038655.1| paired box protein Pax-6 isoform 1 [Mus musculus]
gi|346644677|ref|NP_001231127.1| paired box protein Pax-6 isoform 1 [Mus musculus]
gi|346644705|ref|NP_001231129.1| paired box protein Pax-6 isoform 1 [Mus musculus]
gi|354470765|ref|XP_003497615.1| PREDICTED: paired box protein Pax-6 isoform 2 [Cricetulus griseus]
gi|1405744|emb|CAA45379.1| Pax-6 (paired box containing gene) [Mus musculus]
gi|15277449|gb|AAH11272.1| Paired box gene 6 [Mus musculus]
gi|18138034|emb|CAC80519.1| paired box protein [Mus musculus]
gi|148695799|gb|EDL27746.1| paired box gene 6, isoform CRA_b [Mus musculus]
gi|148695802|gb|EDL27749.1| paired box gene 6, isoform CRA_b [Mus musculus]
Length = 436
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|346644870|ref|NP_001231107.1| paired box protein Pax-6 isoform 2 [Sus scrofa]
Length = 355
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 117 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 176
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 177 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 219
>gi|115501617|gb|ABI98856.1| paired box 6 transcript variant 11 [Columba livia]
Length = 355
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 117 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 176
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 177 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 219
>gi|334331633|ref|XP_001368528.2| PREDICTED: paired box protein Pax-6 isoform 1 [Monodelphis
domestica]
Length = 553
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 315 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 374
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 375 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 417
>gi|44922124|gb|AAS48919.1| paired box 6 isoform 5a [Rattus norvegicus]
gi|44922126|gb|AAS48920.1| paired box 6 isoform 5a [Rattus norvegicus]
Length = 436
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|281350934|gb|EFB26518.1| hypothetical protein PANDA_005849 [Ailuropoda melanoleuca]
Length = 434
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 196 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 255
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 256 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 298
>gi|45384210|ref|NP_990397.1| paired box protein Pax-6 [Gallus gallus]
gi|2576237|dbj|BAA23004.1| PAX6 protein [Gallus gallus]
gi|115501595|gb|ABI98845.1| paired box 6 [Columba livia]
gi|115501597|gb|ABI98846.1| paired box 6 transcript variant 1 [Columba livia]
Length = 436
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|402893913|ref|XP_003910125.1| PREDICTED: paired box protein Pax-6 isoform 4 [Papio anubis]
gi|402893915|ref|XP_003910126.1| PREDICTED: paired box protein Pax-6 isoform 5 [Papio anubis]
gi|402893919|ref|XP_003910128.1| PREDICTED: paired box protein Pax-6 isoform 7 [Papio anubis]
gi|402893921|ref|XP_003910129.1| PREDICTED: paired box protein Pax-6 isoform 8 [Papio anubis]
Length = 436
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|344245472|gb|EGW01576.1| Paired box protein Pax-6 [Cricetulus griseus]
Length = 544
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 90/107 (84%), Gaps = 2/107 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 280 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 339
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P +++
Sbjct: 340 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSS 386
>gi|99028934|ref|NP_001035735.1| paired box protein Pax-6 [Bos taurus]
gi|344281156|ref|XP_003412346.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Loxodonta
africana]
gi|426245234|ref|XP_004016418.1| PREDICTED: paired box protein Pax-6 isoform 1 [Ovis aries]
gi|426245236|ref|XP_004016419.1| PREDICTED: paired box protein Pax-6 isoform 2 [Ovis aries]
gi|426245238|ref|XP_004016420.1| PREDICTED: paired box protein Pax-6 isoform 3 [Ovis aries]
gi|426245240|ref|XP_004016421.1| PREDICTED: paired box protein Pax-6 isoform 4 [Ovis aries]
gi|119390857|sp|Q1LZF1.1|PAX6_BOVIN RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
gi|94534889|gb|AAI16039.1| Paired box 6 [Bos taurus]
gi|296479736|tpg|DAA21851.1| TPA: paired box protein Pax-6 [Bos taurus]
Length = 422
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|4580424|ref|NP_001595.2| paired box protein Pax-6 isoform b [Homo sapiens]
gi|386642911|ref|NP_001245391.1| paired box protein Pax-6 isoform b [Homo sapiens]
gi|386642913|ref|NP_001245392.1| paired box protein Pax-6 isoform b [Homo sapiens]
gi|301764208|ref|XP_002917525.1| PREDICTED: paired box protein Pax-6-like [Ailuropoda melanoleuca]
gi|390470364|ref|XP_002755188.2| PREDICTED: paired box protein Pax-6 isoform 1 [Callithrix jacchus]
gi|390470366|ref|XP_003734277.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|390470368|ref|XP_003734278.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|397520715|ref|XP_003830457.1| PREDICTED: paired box protein Pax-6 isoform 4 [Pan paniscus]
gi|397520717|ref|XP_003830458.1| PREDICTED: paired box protein Pax-6 isoform 5 [Pan paniscus]
gi|397520719|ref|XP_003830459.1| PREDICTED: paired box protein Pax-6 isoform 6 [Pan paniscus]
gi|403254508|ref|XP_003920007.1| PREDICTED: paired box protein Pax-6 isoform 4 [Saimiri boliviensis
boliviensis]
gi|403254510|ref|XP_003920008.1| PREDICTED: paired box protein Pax-6 isoform 5 [Saimiri boliviensis
boliviensis]
gi|403254512|ref|XP_003920009.1| PREDICTED: paired box protein Pax-6 isoform 6 [Saimiri boliviensis
boliviensis]
gi|410973488|ref|XP_003993181.1| PREDICTED: paired box protein Pax-6 isoform 4 [Felis catus]
gi|410973490|ref|XP_003993182.1| PREDICTED: paired box protein Pax-6 isoform 5 [Felis catus]
gi|410973492|ref|XP_003993183.1| PREDICTED: paired box protein Pax-6 isoform 6 [Felis catus]
gi|410973494|ref|XP_003993184.1| PREDICTED: paired box protein Pax-6 isoform 7 [Felis catus]
gi|426367844|ref|XP_004050931.1| PREDICTED: paired box protein Pax-6 isoform 4 [Gorilla gorilla
gorilla]
gi|426367846|ref|XP_004050932.1| PREDICTED: paired box protein Pax-6 isoform 5 [Gorilla gorilla
gorilla]
gi|426367850|ref|XP_004050934.1| PREDICTED: paired box protein Pax-6 isoform 7 [Gorilla gorilla
gorilla]
gi|326205307|dbj|BAJ84032.1| paired box protein Pax-6 [Homo sapiens]
gi|326205309|dbj|BAJ84033.1| paired box protein Pax-6 [Homo sapiens]
gi|326205311|dbj|BAJ84034.1| paired box protein Pax-6 [Homo sapiens]
gi|380813236|gb|AFE78492.1| paired box protein Pax-6 isoform b [Macaca mulatta]
Length = 436
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|149022827|gb|EDL79721.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
gi|149022830|gb|EDL79724.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
Length = 456
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 218 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 277
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 278 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 320
>gi|383296|prf||1902328A PAX6 gene
Length = 422
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|402893907|ref|XP_003910122.1| PREDICTED: paired box protein Pax-6 isoform 1 [Papio anubis]
gi|402893909|ref|XP_003910123.1| PREDICTED: paired box protein Pax-6 isoform 2 [Papio anubis]
gi|402893911|ref|XP_003910124.1| PREDICTED: paired box protein Pax-6 isoform 3 [Papio anubis]
gi|402893917|ref|XP_003910127.1| PREDICTED: paired box protein Pax-6 isoform 6 [Papio anubis]
Length = 422
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|321464774|gb|EFX75780.1| eyeless [Daphnia pulex]
Length = 619
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+DDQARLRLKRKLQRNRTSFTN+QI++LEKEFERTHYPDVFARERLAAKIGLPEARIQVW
Sbjct: 271 DDDQARLRLKRKLQRNRTSFTNEQIESLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 330
Query: 106 FSNRRAKWRREEKLRNQRQ 124
FSNRRAKWRREEKLRNQR+
Sbjct: 331 FSNRRAKWRREEKLRNQRR 349
>gi|4505615|ref|NP_000271.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|189083681|ref|NP_001121084.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|346644712|ref|NP_001231130.1| paired box protein Pax-6 isoform 2 [Mus musculus]
gi|346644716|ref|NP_001231131.1| paired box protein Pax-6 isoform 2 [Mus musculus]
gi|346644858|ref|NP_001231101.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
gi|346644860|ref|NP_001231102.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
gi|386642915|ref|NP_001245393.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|386642917|ref|NP_001245394.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|388452718|ref|NP_001253186.1| paired box protein Pax-6 [Macaca mulatta]
gi|354470763|ref|XP_003497614.1| PREDICTED: paired box protein Pax-6 isoform 1 [Cricetulus griseus]
gi|390470358|ref|XP_003734275.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|390470360|ref|XP_002755189.2| PREDICTED: paired box protein Pax-6 isoform 2 [Callithrix jacchus]
gi|390470362|ref|XP_003734276.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|395815485|ref|XP_003781257.1| PREDICTED: paired box protein Pax-6 [Otolemur garnettii]
gi|397520709|ref|XP_003830454.1| PREDICTED: paired box protein Pax-6 isoform 1 [Pan paniscus]
gi|397520711|ref|XP_003830455.1| PREDICTED: paired box protein Pax-6 isoform 2 [Pan paniscus]
gi|397520713|ref|XP_003830456.1| PREDICTED: paired box protein Pax-6 isoform 3 [Pan paniscus]
gi|403254502|ref|XP_003920004.1| PREDICTED: paired box protein Pax-6 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403254504|ref|XP_003920005.1| PREDICTED: paired box protein Pax-6 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403254506|ref|XP_003920006.1| PREDICTED: paired box protein Pax-6 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410973482|ref|XP_003993178.1| PREDICTED: paired box protein Pax-6 isoform 1 [Felis catus]
gi|410973484|ref|XP_003993179.1| PREDICTED: paired box protein Pax-6 isoform 2 [Felis catus]
gi|410973486|ref|XP_003993180.1| PREDICTED: paired box protein Pax-6 isoform 3 [Felis catus]
gi|426367838|ref|XP_004050928.1| PREDICTED: paired box protein Pax-6 isoform 1 [Gorilla gorilla
gorilla]
gi|426367840|ref|XP_004050929.1| PREDICTED: paired box protein Pax-6 isoform 2 [Gorilla gorilla
gorilla]
gi|426367842|ref|XP_004050930.1| PREDICTED: paired box protein Pax-6 isoform 3 [Gorilla gorilla
gorilla]
gi|426367848|ref|XP_004050933.1| PREDICTED: paired box protein Pax-6 isoform 6 [Gorilla gorilla
gorilla]
gi|6174889|sp|P26367.2|PAX6_HUMAN RecName: Full=Paired box protein Pax-6; AltName: Full=Aniridia type
II protein; AltName: Full=Oculorhombin
gi|51702790|sp|P63015.1|PAX6_MOUSE RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
gi|189633|gb|AAA36416.1| paired-box protein [Homo sapiens]
gi|1405745|emb|CAA45380.1| Pax-6 (paired box containing gene) [Mus musculus]
gi|15080397|gb|AAH11953.1| Paired box 6 [Homo sapiens]
gi|15422113|gb|AAK95849.1| paired box protein PAX6 [Homo sapiens]
gi|22477504|gb|AAH36957.1| Pax6 protein [Mus musculus]
gi|51872083|gb|AAU12168.1| paired box gene 6 isoform a [Homo sapiens]
gi|90076866|dbj|BAE88113.1| unnamed protein product [Macaca fascicularis]
gi|123981066|gb|ABM82362.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
gi|123995873|gb|ABM85538.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
gi|148695798|gb|EDL27745.1| paired box gene 6, isoform CRA_a [Mus musculus]
gi|261860050|dbj|BAI46547.1| paired box 6 [synthetic construct]
gi|380813234|gb|AFE78491.1| paired box protein Pax-6 isoform a [Macaca mulatta]
Length = 422
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|6981334|ref|NP_037133.1| paired box protein Pax-6 [Rattus norvegicus]
gi|51704214|sp|P63016.1|PAX6_RAT RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
gi|1568653|gb|AAB09042.1| paired-box/homeobox protein [Rattus norvegicus]
gi|118764376|gb|AAI28742.1| Paired box 6 [Rattus norvegicus]
Length = 422
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|34364871|emb|CAE45868.1| hypothetical protein [Homo sapiens]
Length = 436
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|26389393|dbj|BAC25729.1| unnamed protein product [Mus musculus]
Length = 422
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|348557450|ref|XP_003464532.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Cavia
porcellus]
Length = 436
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|348557448|ref|XP_003464531.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Cavia
porcellus]
Length = 422
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|193786700|dbj|BAG52023.1| unnamed protein product [Homo sapiens]
Length = 422
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|115501601|gb|ABI98848.1| paired box 6 transcript variant 3 [Columba livia]
Length = 422
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|148222721|ref|NP_001091013.1| paired box gene 6 [Canis lupus familiaris]
gi|344281158|ref|XP_003412347.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Loxodonta
africana]
gi|426245242|ref|XP_004016422.1| PREDICTED: paired box protein Pax-6 isoform 5 [Ovis aries]
gi|426245244|ref|XP_004016423.1| PREDICTED: paired box protein Pax-6 isoform 6 [Ovis aries]
gi|426245246|ref|XP_004016424.1| PREDICTED: paired box protein Pax-6 isoform 7 [Ovis aries]
gi|426245248|ref|XP_004016425.1| PREDICTED: paired box protein Pax-6 isoform 8 [Ovis aries]
gi|134289886|gb|ABO70134.1| PAX6 [Canis lupus familiaris]
Length = 436
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|77547035|gb|ABA90484.1| paired box protein PAX6 isoform a [Oryctolagus cuniculus]
Length = 422
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|115501611|gb|ABI98853.1| paired box 6 transcript variant 8 [Columba livia]
Length = 380
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 148 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 207
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 208 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 250
>gi|410045098|ref|XP_003954413.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6 [Pan
troglodytes]
Length = 430
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 192 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 251
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 252 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 294
>gi|148695801|gb|EDL27748.1| paired box gene 6, isoform CRA_d [Mus musculus]
Length = 499
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 261 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 320
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 321 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 363
>gi|115501607|gb|ABI98851.1| paired box 6 transcript variant 6 [Columba livia]
Length = 394
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 162 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 221
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 222 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 264
>gi|119588642|gb|EAW68236.1| paired box gene 6 (aniridia, keratitis), isoform CRA_c [Homo
sapiens]
Length = 470
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 232 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 291
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 292 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 334
>gi|189353|gb|AAA59962.1| oculorhombin [Homo sapiens]
Length = 422
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|115501615|gb|ABI98855.1| paired box 6 transcript variant 10 [Columba livia]
Length = 363
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 131 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 190
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 191 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 233
>gi|338727409|ref|XP_001918200.2| PREDICTED: paired box protein Pax-6 [Equus caballus]
Length = 395
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 157 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 216
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 217 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 259
>gi|115501619|gb|ABI98857.1| paired box 6 transcript variant 12 [Columba livia]
Length = 349
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 117 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 176
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 177 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 219
>gi|119588639|gb|EAW68233.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
sapiens]
gi|119588640|gb|EAW68234.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
sapiens]
Length = 456
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 218 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 277
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 278 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 320
>gi|115501599|gb|ABI98847.1| paired box 6 transcript variant 2 [Columba livia]
Length = 430
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|2696971|dbj|BAA24024.1| PAX6 LL [Cynops pyrrhogaster]
Length = 452
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 215 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 274
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 275 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 317
>gi|61189938|gb|AAX39333.1| paired box gene 6 [Ovis aries]
Length = 346
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 130 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 189
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 190 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 232
>gi|115501623|gb|ABI98859.1| paired box 6 transcript variant 14 [Columba livia]
gi|115501627|gb|ABI98861.1| paired box 6 transcript variant 16 [Columba livia]
gi|115501631|gb|ABI98863.1| paired box 6 transcript variant 18 [Columba livia]
gi|115501635|gb|ABI98865.1| paired box 6 transcript variant 20 [Columba livia]
gi|115501639|gb|ABI98867.1| paired box 6 transcript variant 22 [Columba livia]
gi|115501643|gb|ABI98869.1| paired box 6 transcript variant 24 [Columba livia]
gi|115501647|gb|ABI98871.1| paired box 6 transcript variant 26 [Columba livia]
gi|115501651|gb|ABI98873.1| paired box 6 transcript variant 28 [Columba livia]
gi|115501655|gb|ABI98875.1| paired box 6 transcript variant 30 [Columba livia]
gi|115501659|gb|ABI98877.1| paired box 6 transcript variant 32 [Columba livia]
gi|115501663|gb|ABI98879.1| paired box 6 transcript variant 34 [Columba livia]
gi|115501667|gb|ABI98881.1| paired box 6 transcript variant 36 [Columba livia]
gi|115501671|gb|ABI98883.1| paired box 6 transcript variant 38 [Columba livia]
Length = 280
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 48 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 107
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 108 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 150
>gi|1669587|dbj|BAA13680.1| Xenopus Pax-6 long [Xenopus laevis]
Length = 421
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 92/119 (77%), Gaps = 5/119 (4%)
Query: 21 LDGLGSDETCT---TIGDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEK 75
+ G + E C +G+N+N SN E D+ Q RL+LKRKLQ+NRTSFT +QI+ LEK
Sbjct: 168 VPGQPAQEGCQPQEGVGENTNSISSNGEDSDEAQMRLQLKRKLQKNRTSFTQEQIEALEK 227
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
EFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR+ S P+ P
Sbjct: 228 EFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRREASNTPSHIP 286
>gi|5758935|gb|AAD50901.1|AF169412_1 paired-box transcription factor ++ isoform, partial [Ambystoma
mexicanum]
Length = 433
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 196 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 255
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 256 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 298
>gi|5758939|gb|AAD50903.1|AF169414_1 paired-box transcription factor -+ isoform, partial [Ambystoma
mexicanum]
Length = 419
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 182 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 241
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 242 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 284
>gi|395543615|ref|XP_003773712.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
[Sarcophilus harrisii]
Length = 484
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 246 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 305
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 306 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 348
>gi|1352720|sp|P47238.1|PAX6_COTJA RecName: Full=Paired box protein Pax-6; AltName: Full=Pax-QNR
gi|481053|pir||S37689 paired box transcription factor Pax-6 - quail
gi|311772|emb|CAA49899.1| paired box and homeobox [Coturnix coturnix]
gi|115501603|gb|ABI98849.1| paired box 6 transcript variant 4 [Columba livia]
Length = 416
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|47206453|emb|CAF89478.1| unnamed protein product [Tetraodon nigroviridis]
Length = 433
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 80/93 (86%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
E+ Q RL+LKRKLQRNRTSFT DQID LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 197 EETQMRLQLKRKLQRNRTSFTQDQIDALEKEFERTHYPDVFARERLANKIDLPEARIQVW 256
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
FSNRRAKWRREEKLRNQR++GS P +++
Sbjct: 257 FSNRRAKWRREEKLRNQRRQGSNPSAHIPISSS 289
>gi|410895927|ref|XP_003961451.1| PREDICTED: paired box protein Pax-6-like [Takifugu rubripes]
Length = 276
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 5/111 (4%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 65 EESQLRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEARIQVW 124
Query: 106 FSNRRAKWRREEKLRNQRQRG---SADPTQAP--NNNNNNIVNNNNNSSDG 151
FSNRRAKWRREEKLRNQR+ G S +QAP + N ++ + + SS G
Sbjct: 125 FSNRRAKWRREEKLRNQRRSGGVTSCSQSQAPLTTSFNTSVYHQQHGSSSG 175
>gi|444732073|gb|ELW72394.1| Paired box protein Pax-6 [Tupaia chinensis]
Length = 601
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|1669589|dbj|BAA13681.1| Xenopus Pax-6 short [Xenopus laevis]
Length = 370
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/104 (74%), Positives = 87/104 (83%), Gaps = 2/104 (1%)
Query: 33 IGDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+G+N+N SN E D+ Q RL+LKRKLQ+NRTSFT +QI+ LEKEFERTHYPDVFARER
Sbjct: 183 VGENTNSISSNGEDSDEAQMRLQLKRKLQKNRTSFTQEQIEALEKEFERTHYPDVFARER 242
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
LAAKI LPEARIQVWFSNRRAKWRREEKLRNQR+ S P+ P
Sbjct: 243 LAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRREASNTPSHIP 286
>gi|326919723|ref|XP_003206127.1| PREDICTED: paired box protein Pax-6-like [Meleagris gallopavo]
Length = 377
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 90/107 (84%), Gaps = 2/107 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 145 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 204
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P +++
Sbjct: 205 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSS 251
>gi|325973715|emb|CBX88048.1| Pax6 transcription factor [Scyliorhinus canicula]
Length = 497
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 87/110 (79%), Gaps = 5/110 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G E +I NS+ + ++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPD
Sbjct: 257 GGAENTNSINSNSD-----DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPD 311
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 312 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 361
>gi|269200156|gb|ACZ28705.1| paired box protein 6 isoform c [Homo sapiens]
Length = 401
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 184 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 244 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|432924264|ref|XP_004080546.1| PREDICTED: paired box protein Pax-6-like [Oryzias latipes]
Length = 290
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/119 (66%), Positives = 91/119 (76%), Gaps = 5/119 (4%)
Query: 44 EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ 103
E E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLA KI LPEARIQ
Sbjct: 64 EGEESQLRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEARIQ 123
Query: 104 VWFSNRRAKWRREEKLRNQRQRG---SADPTQAP--NNNNNNIVNNNNNSSDGCTPSPA 157
VWFSNRRAKWRREEKLRNQR+ G S +QAP + + ++ + + SS G S A
Sbjct: 124 VWFSNRRAKWRREEKLRNQRRSGGVTSCSQSQAPLSTSFSTSVYHQQHGSSSGSMLSQA 182
>gi|18138032|emb|CAC80518.1| paired box protein [Mus musculus]
Length = 309
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|327259829|ref|XP_003214738.1| PREDICTED: paired box protein Pax-6-like isoform 4 [Anolis
carolinensis]
Length = 400
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 176 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 235
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 236 FSNRRAKWRREEKLRNQRRQASNTPSHIP 264
>gi|3204116|emb|CAA11367.1| Pax6 [Branchiostoma floridae]
Length = 462
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 14 NTTDKIELDGLGSDETCTTIG-DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDN 72
N T K E DG + + T G + GSN + ++ QARLRLKRKLQRNR+SFT +QI+
Sbjct: 205 NVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRSSFTQEQIEA 264
Query: 73 LEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRN
Sbjct: 265 LEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 313
>gi|351714944|gb|EHB17863.1| Paired box protein Pax-6 [Heterocephalus glaber]
Length = 1055
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 98/136 (72%), Gaps = 5/136 (3%)
Query: 5 EKPLETKRFNTTDKIELDGLGSDETCTTIGDNSNP-GSNLEPEDD-QARLRLKRKLQRNR 62
+ P RF + DG E G+N+N SN E D+ Q RL+LKRKLQRNR
Sbjct: 791 QTPRGATRFRWSHLWIPDGCQQQEG---AGENTNSISSNGEDSDEAQMRLQLKRKLQRNR 847
Query: 63 TSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
TSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQ
Sbjct: 848 TSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQ 907
Query: 123 RQRGSADPTQAPNNNN 138
R++ S P+ P +++
Sbjct: 908 RRQASNTPSHIPISSS 923
>gi|5758937|gb|AAD50902.1|AF169413_1 paired-box transcription factor +- isoform, partial [Ambystoma
mexicanum]
Length = 404
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 196 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 255
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 256 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 298
>gi|327259825|ref|XP_003214736.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Anolis
carolinensis]
Length = 386
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 162 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 221
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 222 FSNRRAKWRREEKLRNQRRQASNTPSHIP 250
>gi|5758941|gb|AAD50904.1|AF169415_1 paired-box transcription factor -- isoform, partial [Ambystoma
mexicanum]
Length = 390
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 182 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 241
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 242 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 284
>gi|1352719|sp|P47237.1|PAX6_CHICK RecName: Full=Paired box protein Pax-6
gi|545839|gb|AAB30163.1| transcription factor [Gallus gallus]
Length = 216
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/90 (78%), Positives = 80/90 (88%)
Query: 49 QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSN 108
Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSN
Sbjct: 1 QMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSN 60
Query: 109 RRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
RRAKWRREEKLRNQR++ S P+ P +++
Sbjct: 61 RRAKWRREEKLRNQRRQASNTPSHIPISSS 90
>gi|327259831|ref|XP_003214739.1| PREDICTED: paired box protein Pax-6-like isoform 5 [Anolis
carolinensis]
Length = 369
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 145 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 204
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 205 FSNRRAKWRREEKLRNQRRQASNTPSHIP 233
>gi|17227115|gb|AAL38015.1| PAX6 [Mus musculus]
Length = 352
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 164 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 223
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 224 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 266
>gi|325516451|gb|ADZ24784.1| Pax6 [Terebratalia transversa]
Length = 433
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
Query: 32 TIGDNSNPGSNLEPE-DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
T G +SNP + E D+Q R+RLKRKLQRNRTSFTN QI+ LEKEFERTHYPDVFARER
Sbjct: 200 TAGSDSNPETPQNGESDEQMRMRLKRKLQRNRTSFTNSQIEALEKEFERTHYPDVFARER 259
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
LA KI LPEARIQVWFSNRRAKWRREEKLRNQR+ + ++ P N++
Sbjct: 260 LAQKIDLPEARIQVWFSNRRAKWRREEKLRNQRREAANGTSRIPINSS 307
>gi|327259833|ref|XP_003214740.1| PREDICTED: paired box protein Pax-6-like isoform 6 [Anolis
carolinensis]
Length = 355
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 131 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 190
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 191 FSNRRAKWRREEKLRNQRRQASNTPSHIP 219
>gi|148222787|ref|NP_001079413.1| paired box 6 [Xenopus laevis]
gi|27469846|gb|AAH41712.1| MGC52531 protein [Xenopus laevis]
Length = 453
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 229 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 288
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 289 FSNRRAKWRREEKLRNQRRQASNTPSHIP 317
>gi|151564048|gb|ABS17534.1| PAX6 [Pseudepidalea raddei]
Length = 422
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 198 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 257
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 FSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|327259823|ref|XP_003214735.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Anolis
carolinensis]
Length = 422
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 198 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 257
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 FSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|327259827|ref|XP_003214737.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Anolis
carolinensis]
Length = 436
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 212 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 271
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 272 FSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|8132383|gb|AAF73271.1|AF154555_1 paired domain transcription factor variant A [Xenopus laevis]
gi|8132385|gb|AAF73272.1|AF154556_1 paired domain transcription factor variant A [Xenopus laevis]
Length = 422
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 198 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 257
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 FSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|328716918|ref|XP_003246075.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Acyrthosiphon
pisum]
Length = 571
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/78 (91%), Positives = 73/78 (93%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+D Q RLRLKRKLQRNRTSFTNDQID+LEKEFERTHYPDVFARERLA I LPEARIQVW
Sbjct: 297 DDSQLRLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLADNISLPEARIQVW 356
Query: 106 FSNRRAKWRREEKLRNQR 123
FSNRRAKWRREEKLRNQR
Sbjct: 357 FSNRRAKWRREEKLRNQR 374
>gi|55742272|ref|NP_001006763.1| paired box 6 [Xenopus (Silurana) tropicalis]
gi|49522632|gb|AAH75551.1| paired box 6 [Xenopus (Silurana) tropicalis]
Length = 424
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 200 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 259
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 260 FSNRRAKWRREEKLRNQRRQASNTPSHIP 288
>gi|327259835|ref|XP_003214741.1| PREDICTED: paired box protein Pax-6-like isoform 7 [Anolis
carolinensis]
Length = 430
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 79/89 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 212 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 271
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 272 FSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|15741042|gb|AAK26167.1| Pax6A [Girardia tigrina]
Length = 464
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 93/137 (67%), Gaps = 8/137 (5%)
Query: 36 NSNPG----SNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
+S PG S ++ E+D R++LKRKLQRNRTSF+ DQ+D+LEKEFERTHYPDVFARE+L
Sbjct: 196 SSEPGNEYLSGVKSENDDMRIKLKRKLQRNRTSFSTDQLDSLEKEFERTHYPDVFAREKL 255
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDG 151
A KI LPEARIQVWFSNRRAKWRREEKLR QRQ + + N+ N N
Sbjct: 256 ADKISLPEARIQVWFSNRRAKWRREEKLRRQRQNLMLGSSGTSSTAETNVTTNGNTQ--- 312
Query: 152 CTPSPAPQVSMDPTDFN 168
C S Q SM T N
Sbjct: 313 CL-STTGQSSMGFTGIN 328
>gi|71987657|ref|NP_001024571.1| Protein VAB-3, isoform b [Caenorhabditis elegans]
gi|14530406|emb|CAC42287.1| Protein VAB-3, isoform b [Caenorhabditis elegans]
Length = 269
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 44 EPEDDQA-RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARI 102
EPEDD A R+RLKRKLQRNRTSFT QI++LEKEFERTHYPDVFARERLA KI LPEARI
Sbjct: 16 EPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARI 75
Query: 103 QVWFSNRRAKWRREEKLRNQRQRGSAD 129
QVWFSNRRAKWRREEK+RN+R G+ D
Sbjct: 76 QVWFSNRRAKWRREEKMRNKRSSGTMD 102
>gi|965067|gb|AAA82992.1| male abnormal-18, partial [Caenorhabditis elegans]
gi|1583406|prf||2120399B mab-18 gene
Length = 261
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 44 EPEDDQA-RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARI 102
EPEDD A R+RLKRKLQRNRTSFT QI++LEKEFERTHYPDVFARERLA KI LPEARI
Sbjct: 8 EPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARI 67
Query: 103 QVWFSNRRAKWRREEKLRNQRQRGSAD 129
QVWFSNRRAKWRREEK+RN+R G+ D
Sbjct: 68 QVWFSNRRAKWRREEKMRNKRSSGTMD 94
>gi|449501716|ref|XP_004176235.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
[Taeniopygia guttata]
Length = 546
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 90/107 (84%), Gaps = 2/107 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 314 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 373
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P +++
Sbjct: 374 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSS 420
>gi|331271830|gb|AED02520.1| paired box 6 protein [Coturnix japonica]
Length = 281
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 126 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 185
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 186 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 228
>gi|328716920|ref|XP_001944246.2| PREDICTED: paired box protein Pax-6-like isoform 1 [Acyrthosiphon
pisum]
Length = 622
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/78 (91%), Positives = 73/78 (93%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+D Q RLRLKRKLQRNRTSFTNDQID+LEKEFERTHYPDVFARERLA I LPEARIQVW
Sbjct: 348 DDSQLRLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLADNISLPEARIQVW 407
Query: 106 FSNRRAKWRREEKLRNQR 123
FSNRRAKWRREEKLRNQR
Sbjct: 408 FSNRRAKWRREEKLRNQR 425
>gi|18138028|emb|CAC80516.1| paired box protein [Mus musculus]
Length = 436
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 86/103 (83%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWF NRRAKWRREEKLRNQR++ S P+ P
Sbjct: 258 AAKIDLPEARIQVWFPNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|1527205|gb|AAB07733.1| XLPAX6 [Xenopus laevis]
Length = 407
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
Query: 41 SNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPE
Sbjct: 206 SNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPE 265
Query: 100 ARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
ARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 266 ARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 300
>gi|903948|gb|AAC47541.1| MAB-18 [Caenorhabditis elegans]
gi|1583407|prf||2120400A mab-18 gene
Length = 284
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 44 EPEDDQA-RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARI 102
EPEDD A R+RLKRKLQRNRTSFT QI++LEKEFERTHYPDVFARERLA KI LPEARI
Sbjct: 31 EPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARI 90
Query: 103 QVWFSNRRAKWRREEKLRNQRQRGSAD 129
QVWFSNRRAKWRREEK+RN+R G+ D
Sbjct: 91 QVWFSNRRAKWRREEKMRNKRSSGTMD 117
>gi|207113487|gb|ACI23462.1| Pax6 variant [Pseudepidalea raddei]
Length = 393
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
Query: 41 SNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPE
Sbjct: 192 SNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPE 251
Query: 100 ARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
ARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 252 ARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|395755881|ref|XP_002833676.2| PREDICTED: paired box protein Pax-6-like, partial [Pongo abelii]
Length = 226
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFAR+RL
Sbjct: 9 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARQRL 68
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 69 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 111
>gi|2369651|emb|CAA68835.1| PAX-6 protein [Astyanax mexicanus]
gi|2369657|emb|CAA68839.1| PAX-6 protein [Astyanax mexicanus]
gi|50082925|gb|AAT70088.1| Pax6 homeobox protein [Astyanax mexicanus]
Length = 437
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 89/113 (78%), Gaps = 8/113 (7%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 217 EEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 276
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAP 158
FSNRRAKWRREEKLRNQR++ NN+ ++I +++ S+ P P P
Sbjct: 277 FSNRRAKWRREEKLRNQRRQA--------NNSTSHIPISSSFSTSVYQPIPQP 321
>gi|18307889|gb|AAL67742.1|AF457141_1 Pax6 paired-less isoform [Mus musculus]
gi|18032022|gb|AAL40860.1| Pax6 paired-less isoform [Mus musculus]
gi|115501673|gb|ABI98884.1| paired box 6 transcript variant 39 [Columba livia]
gi|148695800|gb|EDL27747.1| paired box gene 6, isoform CRA_c [Mus musculus]
gi|149022828|gb|EDL79722.1| paired box gene 6, isoform CRA_b [Rattus norvegicus]
Length = 221
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/88 (79%), Positives = 79/88 (89%)
Query: 51 RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRR 110
RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRR
Sbjct: 2 RLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRR 61
Query: 111 AKWRREEKLRNQRQRGSADPTQAPNNNN 138
AKWRREEKLRNQR++ S P+ P +++
Sbjct: 62 AKWRREEKLRNQRRQASNTPSHIPISSS 89
>gi|8132387|gb|AAF73273.1|AF154557_1 paired domain transcription factor variant B [Xenopus laevis]
Length = 393
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
Query: 41 SNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPE
Sbjct: 192 SNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPE 251
Query: 100 ARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
ARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 252 ARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|8132377|gb|AAF73268.1|AF154552_1 paired domain transcription factor variant B [Xenopus laevis]
Length = 393
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
Query: 41 SNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPE
Sbjct: 192 SNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPE 251
Query: 100 ARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
ARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 252 ARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 286
>gi|260792042|ref|XP_002591036.1| paired box protein 6 [Branchiostoma floridae]
gi|229276236|gb|EEN47047.1| paired box protein 6 [Branchiostoma floridae]
Length = 981
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 83/109 (76%)
Query: 13 FNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDN 72
N D + G+ TC GSN + ++ QARLRLKRKLQRNRTSFT +QI+
Sbjct: 703 VNIRDDMRHCGMLKLXTCMDSSSYQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEA 762
Query: 73 LEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRN
Sbjct: 763 LEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 811
>gi|2369654|emb|CAA68837.1| PAX-6 protein [Astyanax mexicanus]
Length = 433
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 89/113 (78%), Gaps = 8/113 (7%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 213 EEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 272
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAP 158
FSNRRAKWRREEKLRNQR++ NN+ ++I +++ S+ P P P
Sbjct: 273 FSNRRAKWRREEKLRNQRRQA--------NNSTSHIPISSSFSTSVYQPIPQP 317
>gi|2369655|emb|CAA68838.1| PAX-6 protein [Astyanax mexicanus]
Length = 459
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 89/113 (78%), Gaps = 8/113 (7%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 239 EEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 298
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAP 158
FSNRRAKWRREEKLRNQR++ NN+ ++I +++ S+ P P P
Sbjct: 299 FSNRRAKWRREEKLRNQRRQA--------NNSTSHIPISSSFSTSVYQPIPQP 343
>gi|296062658|emb|CBL93955.1| paired box 6 transcript variant [Podarcis siculus]
Length = 173
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 82/93 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKR+LQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 9 DEAQMRLQLKRQLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 68
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
FSNRRAKWRREEKLRNQR++ S P+ P +++
Sbjct: 69 FSNRRAKWRREEKLRNQRRQASNTPSHIPISSS 101
>gi|2369653|emb|CAA68836.1| PAX-6 protein [Astyanax mexicanus]
Length = 441
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 89/113 (78%), Gaps = 8/113 (7%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 221 EEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 280
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAP 158
FSNRRAKWRREEKLRNQR++ NN+ ++I +++ S+ P P P
Sbjct: 281 FSNRRAKWRREEKLRNQRRQA--------NNSTSHIPISSSFSTSVYQPIPQP 325
>gi|443711291|gb|ELU05119.1| hypothetical protein CAPTEDRAFT_228124 [Capitella teleta]
Length = 354
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%), Gaps = 9/110 (8%)
Query: 15 TTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLE 74
TTDK E GSD + T+ +S D+Q R+RLKRKLQRNRTSFT QI+ LE
Sbjct: 102 TTDKKESTPCGSDSSATSRNSDS---------DEQMRMRLKRKLQRNRTSFTTQQIEELE 152
Query: 75 KEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
KEFE+THYPDVFARERLA K+ LPEARIQVWFSNRRAKWRREEKLRNQR+
Sbjct: 153 KEFEKTHYPDVFARERLAQKLDLPEARIQVWFSNRRAKWRREEKLRNQRR 202
>gi|115501675|gb|ABI98885.1| paired box 6 transcript variant 40 [Columba livia]
Length = 215
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/88 (79%), Positives = 79/88 (89%)
Query: 51 RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRR 110
RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRR
Sbjct: 2 RLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRR 61
Query: 111 AKWRREEKLRNQRQRGSADPTQAPNNNN 138
AKWRREEKLRNQR++ S P+ P +++
Sbjct: 62 AKWRREEKLRNQRRQASNTPSHIPISSS 89
>gi|126671099|gb|ABN09916.2| paired box 6B transcription factor [Helobdella sp. MS-2000]
Length = 432
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/116 (67%), Positives = 90/116 (77%), Gaps = 7/116 (6%)
Query: 8 LETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTN 67
E K + K E D L S+E+C +S+P +N D+Q R+RLKRKLQRNRTSFT
Sbjct: 186 FEKKGLLSKRKPEEDALTSNESC-----DSSPRAN--ETDEQMRMRLKRKLQRNRTSFTT 238
Query: 68 DQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR 123
QI++LEKEFE+THYPDVFARERLA K+ LPEARIQVWFSNRRAKWRREEKLRNQR
Sbjct: 239 QQIEDLEKEFEKTHYPDVFARERLAQKLDLPEARIQVWFSNRRAKWRREEKLRNQR 294
>gi|440647293|dbj|BAM74253.1| Pax-6 variant form3 [Idiosepius paradoxus]
Length = 499
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/99 (73%), Positives = 81/99 (81%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS D+Q R+RLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERLA KI LPE
Sbjct: 214 GSQCGETDEQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPE 273
Query: 100 ARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
ARIQVWFSNRRAKWRREEKLRNQR+ + T+ P N++
Sbjct: 274 ARIQVWFSNRRAKWRREEKLRNQRREAANGSTRLPINSS 312
>gi|377685604|gb|AFB74471.1| PAX6, partial [Schmidtea polychroa]
Length = 326
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 86/115 (74%), Gaps = 4/115 (3%)
Query: 36 NSNPG----SNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
+S PG S ++ E+D R++LKRKLQRNRTSF+ DQ+D+LEKEFERTHYPDVFARE+L
Sbjct: 174 SSEPGNEYMSGVKSENDDMRIKLKRKLQRNRTSFSTDQLDSLEKEFERTHYPDVFAREKL 233
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNN 146
A KI LPEARIQVWFSNRRAKWRREEKLR QRQ + + N+ N N
Sbjct: 234 ADKISLPEARIQVWFSNRRAKWRREEKLRRQRQNLMLGSNGTSSTADTNVTTNGN 288
>gi|4519625|dbj|BAA75672.1| DjPax-6 [Dugesia japonica]
Length = 550
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 86/115 (74%), Gaps = 4/115 (3%)
Query: 36 NSNPG----SNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
+S PG S ++ E+D R++LKRKLQRNRTSF+ DQ+D+LEKEFERTHYPDVFARE+L
Sbjct: 260 SSEPGNEYMSGVKSENDDMRIKLKRKLQRNRTSFSTDQLDSLEKEFERTHYPDVFAREKL 319
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNN 146
A KI LPEARIQVWFSNRRAKWRREEKLR QRQ + + N+ N N
Sbjct: 320 ADKISLPEARIQVWFSNRRAKWRREEKLRRQRQNLMLGSSGTSSTAETNVTTNGN 374
>gi|1684800|gb|AAB36534.1| paired box homeodomain protein TPAX6, partial [Mesotriton
alpestris]
Length = 233
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 42 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 101
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
AAKI LPEARIQVWFSNRRAKWRREE+LRNQR++ S P+ P
Sbjct: 102 AAKIDLPEARIQVWFSNRRAKWRREEELRNQRRQASNTPSHIP 144
>gi|390349964|ref|XP_003727316.1| PREDICTED: paired box protein Pax-6-like [Strongylocentrotus
purpuratus]
Length = 268
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/80 (88%), Positives = 74/80 (92%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED QARLRLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 34 EDAQARLRLKRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQVW 93
Query: 106 FSNRRAKWRREEKLRNQRQR 125
FSNRRAKWRREEKLRNQR++
Sbjct: 94 FSNRRAKWRREEKLRNQRRQ 113
>gi|71987648|ref|NP_001024570.1| Protein VAB-3, isoform a [Caenorhabditis elegans]
gi|965066|gb|AAA82991.1| variable abnormal-3 [Caenorhabditis elegans]
gi|6434263|emb|CAA90186.2| Protein VAB-3, isoform a [Caenorhabditis elegans]
gi|1583405|prf||2120399A vab-3 gene
Length = 455
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 44 EPEDDQA-RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARI 102
EPEDD A R+RLKRKLQRNRTSFT QI++LEKEFERTHYPDVFARERLA KI LPEARI
Sbjct: 202 EPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARI 261
Query: 103 QVWFSNRRAKWRREEKLRNQRQRGSAD 129
QVWFSNRRAKWRREEK+RN+R G+ D
Sbjct: 262 QVWFSNRRAKWRREEKMRNKRSSGTMD 288
>gi|293631905|gb|ADE59459.1| paired box protein 6 [Metacrinus rotundus]
Length = 436
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Query: 44 EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ 103
E ++ QARLRLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERLA KI LPEARIQ
Sbjct: 200 ESDETQARLRLKRKLQRNRTSFTPQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQ 259
Query: 104 VWFSNRRAKWRREEKLRNQRQRGSADPTQAPNN 136
VWFSNRRAKWRREEKLRNQR++G +Q+P N
Sbjct: 260 VWFSNRRAKWRREEKLRNQRRQGDGT-SQSPVN 291
>gi|348523547|ref|XP_003449285.1| PREDICTED: paired box protein Pax-6-like [Oreochromis niloticus]
Length = 715
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 81/95 (85%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
E+ Q RL+LKRKLQRNRTSFT DQI+ LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 498 EETQMRLQLKRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLANKIDLPEARIQVW 557
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNN 140
FSNRRAKWRREEKLRNQR++ S+ P +++ N
Sbjct: 558 FSNRRAKWRREEKLRNQRRQVSSSSNHIPISSSFN 592
>gi|410929047|ref|XP_003977911.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Takifugu
rubripes]
Length = 448
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/102 (72%), Positives = 83/102 (81%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+NLEKEFERTHYPD
Sbjct: 213 GAGENTNSISSNGE-----DSEETQLRLQLKRKLQRNRTSFTQEQIENLEKEFERTHYPD 267
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 268 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 309
>gi|410929043|ref|XP_003977909.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Takifugu
rubripes]
Length = 436
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/102 (72%), Positives = 83/102 (81%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+NLEKEFERTHYPD
Sbjct: 201 GAGENTNSISSNGE-----DSEETQLRLQLKRKLQRNRTSFTQEQIENLEKEFERTHYPD 255
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 256 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 297
>gi|268578285|ref|XP_002644125.1| C. briggsae CBR-VAB-3 protein [Caenorhabditis briggsae]
Length = 301
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 91/120 (75%), Gaps = 4/120 (3%)
Query: 43 LEPEDDQA-RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
+E EDD A R+RLKRKLQRNRTSFT QI++LEKEFERTHYPDVFARERLA KI LPEAR
Sbjct: 43 IEQEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEAR 102
Query: 102 IQVWFSNRRAKWRREEKLRNQRQRGSADPTQA---PNNNNNNIVNNNNNSSDGCTPSPAP 158
IQVWFSNRRAKWRREEK+R++R G+ D + + P +V +N S+ +P+ P
Sbjct: 103 IQVWFSNRRAKWRREEKMRSKRSCGTMDSSSSNGPPTPKPQGLVTGSNMSNSIGSPASTP 162
>gi|168479564|dbj|BAG11538.1| paired-box protein 6 [Eptatretus burgeri]
Length = 344
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 89/119 (74%), Gaps = 6/119 (5%)
Query: 44 EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ 103
E ++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLA+KI LPEARIQ
Sbjct: 137 ESDEAQIRLQLKRKLQRNRTSFTPEQIEALEKEFERTHYPDVFARERLASKIDLPEARIQ 196
Query: 104 VWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
VWFSNRRAKWRREEKLRNQR++ + P P I N +++ P P P SM
Sbjct: 197 VWFSNRRAKWRREEKLRNQRRQPGSAPDHIP------ISTNFSSTVYQALPQPPPPGSM 249
>gi|984800|gb|AAA75363.1| Pax-6 [Paracentrotus lividus]
Length = 442
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/80 (88%), Positives = 74/80 (92%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED QARLRLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 208 EDAQARLRLKRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQVW 267
Query: 106 FSNRRAKWRREEKLRNQRQR 125
FSNRRAKWRREEKLRNQR++
Sbjct: 268 FSNRRAKWRREEKLRNQRRQ 287
>gi|47218729|emb|CAG05701.1| unnamed protein product [Tetraodon nigroviridis]
Length = 417
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/102 (72%), Positives = 83/102 (81%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+NLEKEFERTHYPD
Sbjct: 182 GAGENTNSISSNGE-----DSEETQLRLQLKRKLQRNRTSFTQEQIENLEKEFERTHYPD 236
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 237 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 278
>gi|410929049|ref|XP_003977912.1| PREDICTED: paired box protein Pax-6-like isoform 4 [Takifugu
rubripes]
Length = 456
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/102 (72%), Positives = 83/102 (81%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+NLEKEFERTHYPD
Sbjct: 221 GAGENTNSISSNGE-----DSEETQLRLQLKRKLQRNRTSFTQEQIENLEKEFERTHYPD 275
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 276 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 317
>gi|325973713|emb|CBX88047.1| Pax6 transcription factor [Eptatretus burgeri]
Length = 403
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 89/119 (74%), Gaps = 6/119 (5%)
Query: 44 EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ 103
E ++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLA+KI LPEARIQ
Sbjct: 196 ESDEAQIRLQLKRKLQRNRTSFTPEQIEALEKEFERTHYPDVFARERLASKIDLPEARIQ 255
Query: 104 VWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
VWFSNRRAKWRREEKLRNQR++ + P P I N +++ P P P SM
Sbjct: 256 VWFSNRRAKWRREEKLRNQRRQPGSAPDHIP------ISTNFSSTVYQALPQPPPPGSM 308
>gi|56714093|gb|AAW24017.1| homeodomain protein Pax6 [Oikopleura dioica]
Length = 414
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 75/85 (88%)
Query: 44 EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ 103
E D QARL+LKRKLQRNRTSFT QI++LE EFERTHYPDVFARERLA KIGLPEARIQ
Sbjct: 220 EDPDIQARLQLKRKLQRNRTSFTQQQIESLESEFERTHYPDVFARERLATKIGLPEARIQ 279
Query: 104 VWFSNRRAKWRREEKLRNQRQRGSA 128
VWFSNRRAKWRREEK+RNQR SA
Sbjct: 280 VWFSNRRAKWRREEKMRNQRPATSA 304
>gi|348502261|ref|XP_003438687.1| PREDICTED: paired box protein Pax-6-like [Oreochromis niloticus]
Length = 276
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/100 (75%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 44 EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ 103
E E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLA KI LPEARIQ
Sbjct: 64 EGEESQLRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEARIQ 123
Query: 104 VWFSNRRAKWRREEKLRNQRQRG---SADPTQAPNNNNNN 140
VWFSNRRAKWRREEKLRNQR+ G S +QAP + + N
Sbjct: 124 VWFSNRRAKWRREEKLRNQRRSGGVTSCSQSQAPLSTSFN 163
>gi|386783703|gb|AFJ24746.1| Pax6A [Schmidtea mediterranea]
Length = 564
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 86/115 (74%), Gaps = 4/115 (3%)
Query: 36 NSNPG----SNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
+S PG S ++ E+D R++LKRKLQRNRTSF+ DQ+D+LEKEFERTHYPDVFARE+L
Sbjct: 274 SSEPGNEYMSGVKSENDDMRIKLKRKLQRNRTSFSTDQLDSLEKEFERTHYPDVFAREKL 333
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNN 146
A KI LPEARIQVWFSNRRAKWRREEKLR QRQ + + N+ N N
Sbjct: 334 ADKISLPEARIQVWFSNRRAKWRREEKLRRQRQNLMLGSNGTSSTADTNVTTNGN 388
>gi|3402201|emb|CAA16493.1| PAX6 [Takifugu rubripes]
Length = 409
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/95 (80%), Positives = 84/95 (88%), Gaps = 2/95 (2%)
Query: 34 GDNSNP-GSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E E+ Q RL+LKRKLQRNRTSFT +QI+NLEKEFERTHYPDVFARERL
Sbjct: 204 GENTNSISSNGEDSEETQLRLQLKRKLQRNRTSFTQEQIENLEKEFERTHYPDVFARERL 263
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 264 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 298
>gi|21667881|gb|AAM74161.1|AF513712_1 Pax-6 protein [Euprymna scolopes]
Length = 503
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 83/105 (79%), Gaps = 4/105 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
GD S G D+Q R+RLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERLA
Sbjct: 256 GDGSQNGET----DEQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQ 311
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
KI LPEARIQVWFSNRRAKWRREEKLRNQR+ + T+ P N++
Sbjct: 312 KIDLPEARIQVWFSNRRAKWRREEKLRNQRREAANGSTRLPINSS 356
>gi|80971566|gb|ABB52751.1| Pax-6, partial [Strongylocentrotus droebachiensis]
Length = 384
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/80 (88%), Positives = 74/80 (92%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED QARLRLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 181 EDAQARLRLKRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQVW 240
Query: 106 FSNRRAKWRREEKLRNQRQR 125
FSNRRAKWRREEKLRNQR++
Sbjct: 241 FSNRRAKWRREEKLRNQRRQ 260
>gi|197359130|gb|ACH69781.1| paired box protein 6a [Anabarilius grahami]
Length = 284
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 55 GENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 114
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 115 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 149
>gi|1778017|gb|AAB40616.1| Pax-6 [Doryteuthis opalescens]
Length = 460
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 83/105 (79%), Gaps = 4/105 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
GD S G D+Q R+RLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERLA
Sbjct: 213 GDGSQNGET----DEQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQ 268
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
KI LPEARIQVWFSNRRAKWRREEKLRNQR+ + T+ P N++
Sbjct: 269 KIDLPEARIQVWFSNRRAKWRREEKLRNQRREAANGSTRLPINSS 313
>gi|341903373|gb|EGT59308.1| hypothetical protein CAEBREN_04513 [Caenorhabditis brenneri]
Length = 473
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 91/124 (73%), Gaps = 13/124 (10%)
Query: 43 LEPEDDQA-RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
+E EDD A R+RLKRKLQRNRTSFT QI++LEKEFERTHYPDVFARERLA KI LPEAR
Sbjct: 215 VEAEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEAR 274
Query: 102 IQVWFSNRRAKWRREEKLRNQRQRGSAD-------PTQAPNNNNNNIVNNNNNSSDGCTP 154
IQVWFSNRRAKWRREEK+RN+R G+ D PT P + V +N S+ +P
Sbjct: 275 IQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGS-----VTGSNMSNPIGSP 329
Query: 155 SPAP 158
+ P
Sbjct: 330 ASTP 333
>gi|327276026|ref|XP_003222772.1| PREDICTED: paired box protein Pax-6-like [Anolis carolinensis]
Length = 278
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 87/124 (70%), Gaps = 7/124 (5%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVW
Sbjct: 62 DESQIRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 121
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPT 165
FSNRRAKWRREEKLRNQR+ QA + +N++ + PQ + T
Sbjct: 122 FSNRRAKWRREEKLRNQRR-------QAGGTGGHLTINSSFGTGGSTVYQSLPQPTGSGT 174
Query: 166 DFNR 169
R
Sbjct: 175 MLGR 178
>gi|228153|prf||1717390A pax gene
Length = 374
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 140 GENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 199
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 200 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 234
>gi|18859209|ref|NP_571379.1| paired box protein Pax-6 [Danio rerio]
gi|62547|emb|CAA44867.1| pax-6 [Danio rerio]
Length = 451
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 217 GENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 276
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 277 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 311
>gi|432852507|ref|XP_004067282.1| PREDICTED: paired box protein Pax-6 isoform 2 [Oryzias latipes]
Length = 449
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 82/102 (80%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPD
Sbjct: 213 GAGENTNSISSNGE-----DSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPD 267
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 268 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 309
>gi|129651|sp|P26630.1|PAX6_DANRE RecName: Full=Paired box protein Pax-6; AltName: Full=Pax[Zf-a]
gi|62549|emb|CAA43661.1| Pax[zf-a] [Danio rerio]
gi|44890538|gb|AAH66722.1| Pax6a protein [Danio rerio]
Length = 437
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 203 GENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 262
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 263 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 297
>gi|432852505|ref|XP_004067281.1| PREDICTED: paired box protein Pax-6 isoform 1 [Oryzias latipes]
gi|3914281|sp|O73917.1|PAX6_ORYLA RecName: Full=Paired box protein Pax-6
gi|3115324|emb|CAA04395.1| Pax6 [Oryzias latipes]
Length = 437
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 82/102 (80%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPD
Sbjct: 201 GAGENTNSISSNGE-----DSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPD 255
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 256 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 297
>gi|348509484|ref|XP_003442278.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Oreochromis
niloticus]
Length = 437
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 82/102 (80%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPD
Sbjct: 201 GAGENTNSISSNGE-----DSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPD 255
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 256 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 297
>gi|189313477|gb|ACD88755.1| Pax6 isoform 2 [Limulus polyphemus]
Length = 456
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 73/79 (92%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q R+RLKRKL RNRTSFTN+QI+ LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 242 EDSQLRMRLKRKLXRNRTSFTNEQIEALEKEFERTHYPDVFARERLAEKITLPEARIQVW 301
Query: 106 FSNRRAKWRREEKLRNQRQ 124
FSNRRAKWRREEKLRNQR+
Sbjct: 302 FSNRRAKWRREEKLRNQRR 320
>gi|189313475|gb|ACD88754.1| Pax6 isoform 1 [Limulus polyphemus]
Length = 456
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 73/79 (92%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q R+RLKRKL RNRTSFTN+QI+ LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 242 EDSQLRMRLKRKLXRNRTSFTNEQIEALEKEFERTHYPDVFARERLAEKITLPEARIQVW 301
Query: 106 FSNRRAKWRREEKLRNQRQ 124
FSNRRAKWRREEKLRNQR+
Sbjct: 302 FSNRRAKWRREEKLRNQRR 320
>gi|348509486|ref|XP_003442279.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Oreochromis
niloticus]
Length = 449
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 82/102 (80%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPD
Sbjct: 213 GAGENTNSISSNGE-----DSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPD 267
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 268 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 309
>gi|391333106|ref|XP_003740963.1| PREDICTED: paired box protein Pax-6-like [Metaseiulus occidentalis]
Length = 551
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 96/126 (76%), Gaps = 5/126 (3%)
Query: 41 SNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
S+L+ +D+ ARLRLKRKLQRNRTSFT +QID LEKEFERTHYPDVFARE+LAA+I LPE
Sbjct: 302 SSLDGDDETAARLRLKRKLQRNRTSFTMEQIDALEKEFERTHYPDVFAREKLAARIDLPE 361
Query: 100 ARIQVWFSNRRAKWRREEKLRNQRQ-RGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAP 158
ARIQVWFSNRRAKWRREEKLRNQR R A P ++ +N + TP+P+
Sbjct: 362 ARIQVWFSNRRAKWRREEKLRNQRNCRQEASPISHETTTDSPPLNMSQGGPG--TPNPS- 418
Query: 159 QVSMDP 164
Q +++P
Sbjct: 419 QTALEP 424
>gi|210147371|ref|NP_001129718.1| uncharacterized protein LOC100192209 [Danio rerio]
gi|190336586|gb|AAI62065.1| Similar to Pax-family transcription factor 6.2 [Danio rerio]
gi|190336609|gb|AAI62456.1| Similar to Pax-family transcription factor 6.2 [Danio rerio]
Length = 270
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 76/90 (84%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ G E +D Q L+LKRKLQRNRTSFT +QID LEKEFERTHYPDVFARERLAA
Sbjct: 44 GEGVVQGERDEVDDSQLHLQLKRKLQRNRTSFTQEQIDALEKEFERTHYPDVFARERLAA 103
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQR 123
KI LPEARIQVWFSNRRAKWRREEKLRNQR
Sbjct: 104 KIDLPEARIQVWFSNRRAKWRREEKLRNQR 133
>gi|432852509|ref|XP_004067283.1| PREDICTED: paired box protein Pax-6 isoform 3 [Oryzias latipes]
Length = 457
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 82/102 (80%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPD
Sbjct: 221 GAGENTNSISSNGE-----DSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPD 275
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 276 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 317
>gi|18859211|ref|NP_571716.1| paired box gene 6b [Danio rerio]
gi|3779238|gb|AAC96095.1| Pax-family transcription factor 6.2 [Danio rerio]
Length = 437
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 203 GENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 262
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 263 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 297
>gi|301618353|ref|XP_002938577.1| PREDICTED: paired box protein Pax-6-like [Xenopus (Silurana)
tropicalis]
Length = 281
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
Query: 31 TTIGDNSNPGS-NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARE 89
+++ PG+ N + ++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARE
Sbjct: 48 SSLDSEHQPGAANDDLDESQIRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARE 107
Query: 90 RLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGS 127
RLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S
Sbjct: 108 RLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 145
>gi|348509488|ref|XP_003442280.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Oreochromis
niloticus]
Length = 457
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 82/102 (80%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPD
Sbjct: 221 GAGENTNSISSNGE-----DSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPD 275
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 276 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 317
>gi|63028387|gb|AAY27075.1| Pax6 [Oikopleura dioica]
Length = 412
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 75/85 (88%)
Query: 44 EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ 103
E D QARL+LKRKLQRNRTSFT QI++LE EFERTHYPDVFARERLA KIGLPEARIQ
Sbjct: 218 EDPDIQARLQLKRKLQRNRTSFTQQQIESLESEFERTHYPDVFARERLATKIGLPEARIQ 277
Query: 104 VWFSNRRAKWRREEKLRNQRQRGSA 128
VWFSNRRAKWRREEK+RN+R SA
Sbjct: 278 VWFSNRRAKWRREEKMRNRRPATSA 302
>gi|308494689|ref|XP_003109533.1| CRE-VAB-3 protein [Caenorhabditis remanei]
gi|308245723|gb|EFO89675.1| CRE-VAB-3 protein [Caenorhabditis remanei]
Length = 462
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 88/120 (73%), Gaps = 12/120 (10%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+D AR+RLKRKLQRNRTSFT QI++LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 208 DDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVW 267
Query: 106 FSNRRAKWRREEKLRNQRQRGSAD-------PTQAPNNNNNNIVNNNNNSSDGCTPSPAP 158
FSNRRAKWRREEK+RN+R G+ D PT P + V +N S+ +P+ P
Sbjct: 268 FSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGS-----VTGSNMSNPIGSPASTP 322
>gi|313240077|emb|CBY32432.1| unnamed protein product [Oikopleura dioica]
Length = 433
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 73/80 (91%)
Query: 49 QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSN 108
QARL+LKRKLQRNRTSFT QI++LE EFERTHYPDVFARERLA KIGLPEARIQVWFSN
Sbjct: 244 QARLQLKRKLQRNRTSFTQQQIESLESEFERTHYPDVFARERLATKIGLPEARIQVWFSN 303
Query: 109 RRAKWRREEKLRNQRQRGSA 128
RRAKWRREEK+RNQR SA
Sbjct: 304 RRAKWRREEKMRNQRPATSA 323
>gi|313241707|emb|CBY33928.1| unnamed protein product [Oikopleura dioica]
Length = 433
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 73/80 (91%)
Query: 49 QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSN 108
QARL+LKRKLQRNRTSFT QI++LE EFERTHYPDVFARERLA KIGLPEARIQVWFSN
Sbjct: 244 QARLQLKRKLQRNRTSFTQQQIESLESEFERTHYPDVFARERLATKIGLPEARIQVWFSN 303
Query: 109 RRAKWRREEKLRNQRQRGSA 128
RRAKWRREEK+RNQR SA
Sbjct: 304 RRAKWRREEKMRNQRPATSA 323
>gi|1296836|emb|CAA64847.1| Pax6-like protein [Lineus sanguineus]
Length = 370
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 80/92 (86%)
Query: 47 DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWF 106
++Q R+RLKRKLQRNRTSFTN QI+ LEKEFERTHYPDVFARERLA KI LPEARIQVWF
Sbjct: 258 EEQMRIRLKRKLQRNRTSFTNAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWF 317
Query: 107 SNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
SNRRAKWRREEKLRNQR+ + ++ P N++
Sbjct: 318 SNRRAKWRREEKLRNQRRDAANGGSRIPINSS 349
>gi|405966276|gb|EKC31583.1| Paired box protein Pax-6 [Crassostrea gigas]
Length = 481
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 77/92 (83%)
Query: 47 DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWF 106
D+Q RLRLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERL+ KI LPEARIQVWF
Sbjct: 254 DEQLRLRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLSQKIDLPEARIQVWF 313
Query: 107 SNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
SNRRAKWRREEKLRNQR+ + T+ P N
Sbjct: 314 SNRRAKWRREEKLRNQRREVANGATRLPINGG 345
>gi|4426551|dbj|BAA20936.1| mdkPax-6 [Oryzias sp.]
Length = 213
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 82/102 (80%), Gaps = 5/102 (4%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G+ E +I N + E+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPD
Sbjct: 55 GAGENTNSISSNGE-----DSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPD 109
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
VFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 110 VFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 151
>gi|383472210|gb|AFH36032.1| PAX 6, partial [Trachemys dorbigni]
Length = 198
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/89 (77%), Positives = 77/89 (86%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
++ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHY DVFARERLAAKI LPEARIQVW
Sbjct: 22 DEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYXDVFARERLAAKIDLPEARIQVW 81
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAP 134
FSNRRAKWR EEKLRNQR++ S P+ P
Sbjct: 82 FSNRRAKWRGEEKLRNQRRQASNTPSHIP 110
>gi|432860293|ref|XP_004069487.1| PREDICTED: paired box protein Pax-6-like [Oryzias latipes]
Length = 433
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 74/80 (92%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
E+ Q RL+LKRKLQRNRTSFT DQI+ LEKEFERTHYPDVFARERLA KI LPEARIQVW
Sbjct: 214 EETQMRLQLKRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLANKIDLPEARIQVW 273
Query: 106 FSNRRAKWRREEKLRNQRQR 125
FSNRRAKWRREEKLRNQR++
Sbjct: 274 FSNRRAKWRREEKLRNQRRQ 293
>gi|269931719|gb|ACZ54379.1| paired box 6 [Monodelphis domestica]
Length = 282
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 188 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 247
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRG 126
AAKI LPEARIQVWFSNRRAKWRREEKLRNQR++
Sbjct: 248 AAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 282
>gi|241681430|ref|XP_002411608.1| paired box protein Pax-6, putative [Ixodes scapularis]
gi|215504348|gb|EEC13842.1| paired box protein Pax-6, putative [Ixodes scapularis]
Length = 433
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/119 (63%), Positives = 89/119 (74%), Gaps = 7/119 (5%)
Query: 41 SNLEPE-----DDQA--RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+ L+PE DD+A RLRLKRKLQRNRTSF+ +QI+ LEKEFERTHYPDVFARERLAA
Sbjct: 186 AALDPESQESGDDEAAARLRLKRKLQRNRTSFSMEQIEALEKEFERTHYPDVFARERLAA 245
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGC 152
KI LPEARIQVWFSNRRAKWRREEKLR+QR+ A+ P+ + + + + C
Sbjct: 246 KIDLPEARIQVWFSNRRAKWRREEKLRSQRRDSGANSPPRPSPGYASPLYPSLHGPPSC 304
>gi|70570887|dbj|BAE06639.1| transcription factor protein [Ciona intestinalis]
Length = 496
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 73/83 (87%)
Query: 47 DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWF 106
+ARL+LKRKLQRNRTSFT Q++ LEKEFERTHYPDVFARERLA KI LPEARIQVWF
Sbjct: 220 SSEARLQLKRKLQRNRTSFTQIQVEALEKEFERTHYPDVFARERLATKIDLPEARIQVWF 279
Query: 107 SNRRAKWRREEKLRNQRQRGSAD 129
SNRRAKWRREEK+R+QR ++D
Sbjct: 280 SNRRAKWRREEKIRSQRSSAASD 302
>gi|74096055|ref|NP_001027641.1| homeobox transcription factor Pax6 [Ciona intestinalis]
gi|18700477|dbj|BAB85207.1| Pax6 [Ciona intestinalis]
Length = 497
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 73/83 (87%)
Query: 47 DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWF 106
+ARL+LKRKLQRNRTSFT Q++ LEKEFERTHYPDVFARERLA KI LPEARIQVWF
Sbjct: 220 SSEARLQLKRKLQRNRTSFTQIQVEALEKEFERTHYPDVFARERLATKIDLPEARIQVWF 279
Query: 107 SNRRAKWRREEKLRNQRQRGSAD 129
SNRRAKWRREEK+R+QR ++D
Sbjct: 280 SNRRAKWRREEKIRSQRSSAASD 302
>gi|440647295|dbj|BAM74254.1| Pax-6 variant form4 [Idiosepius paradoxus]
Length = 482
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 80/103 (77%), Gaps = 4/103 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS D+Q +RLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERLA KI LPE
Sbjct: 233 GSQCGETDEQMCIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPE 292
Query: 100 ARIQVWFSNRRA----KWRREEKLRNQRQRGSADPTQAPNNNN 138
ARIQVWFSNRRA KWRREEKLRNQR+ + T+ P N++
Sbjct: 293 ARIQVWFSNRRAPAFRKWRREEKLRNQRREAANGSTRLPINSS 335
>gi|313233507|emb|CBY09679.1| unnamed protein product [Oikopleura dioica]
Length = 410
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/77 (84%), Positives = 70/77 (90%)
Query: 52 LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRA 111
++LKRKLQRNRTSFT QI++LE EFERTHYPDVFARERLA KIGLPEARIQVWFSNRRA
Sbjct: 224 IQLKRKLQRNRTSFTQQQIESLESEFERTHYPDVFARERLATKIGLPEARIQVWFSNRRA 283
Query: 112 KWRREEKLRNQRQRGSA 128
KWRREEK+RNQR SA
Sbjct: 284 KWRREEKMRNQRPVTSA 300
>gi|442614511|ref|NP_001259080.1| twin of eyeless, isoform C [Drosophila melanogaster]
gi|440218170|gb|AGB96570.1| twin of eyeless, isoform C [Drosophila melanogaster]
Length = 526
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 86/115 (74%), Gaps = 12/115 (10%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPE VW
Sbjct: 253 EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPE----VW 308
Query: 106 FSNRRAKWRREEKLRNQRQRGSADP------TQAPNNNNNNIVNNNNNSSDGCTP 154
FSNRRAKWRREEK+R QR+ SAD T NN + +++ +S+ TP
Sbjct: 309 FSNRRAKWRREEKMRTQRR--SADTVDGSGRTSTANNPSGTTASSSVATSNNSTP 361
>gi|1835186|emb|CAA71094.1| Pax-6 [Phallusia mammillata]
Length = 464
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/78 (82%), Positives = 73/78 (93%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+D ARL+LKRKLQRNRTSF+ +Q++ LEKEFERTHYPDVFARERLA+KI LPEARIQVW
Sbjct: 219 KDTNARLQLKRKLQRNRTSFSQEQVEALEKEFERTHYPDVFARERLASKIDLPEARIQVW 278
Query: 106 FSNRRAKWRREEKLRNQR 123
FSNRRAKWRREEK+R+QR
Sbjct: 279 FSNRRAKWRREEKMRHQR 296
>gi|83318915|emb|CAJ40659.1| Pax6 protein [Platynereis dumerilii]
Length = 449
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 74/93 (79%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+++Q R+RLKRKLQRNRTSFTN QI+ LEKEFERTHYPDVF RERLA K + E RIQVW
Sbjct: 244 DEEQMRMRLKRKLQRNRTSFTNAQIEALEKEFERTHYPDVFTRERLAKKFDIDETRIQVW 303
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
FSNRRAKWRREEKLR QR+ + P N++
Sbjct: 304 FSNRRAKWRREEKLRQQRREAANGGNHIPINSS 336
>gi|157128224|ref|XP_001661352.1| paired box protein pax-6 [Aedes aegypti]
gi|108882239|gb|EAT46464.1| AAEL002321-PA [Aedes aegypti]
Length = 537
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 73/86 (84%)
Query: 37 SNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIG 96
+ P S++ + D RL LKRKLQRNRTSFT DQI+ LEKEFERTHYPDVF+RERL++K
Sbjct: 226 TQPPSSVGFDSDSERLSLKRKLQRNRTSFTVDQIEYLEKEFERTHYPDVFSRERLSSKTN 285
Query: 97 LPEARIQVWFSNRRAKWRREEKLRNQ 122
LPEARIQVWFSNRRAKWRREEK R+Q
Sbjct: 286 LPEARIQVWFSNRRAKWRREEKQRSQ 311
>gi|126702026|gb|ABN09915.2| paired box 6A transcription factor [Helobdella sp. MS-2000]
Length = 933
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E Q R+RLKRKLQRNRTSF+ QID+LE+EF++THYPDVFARERLA K+ LPE
Sbjct: 373 GSDVE---KQVRMRLKRKLQRNRTSFSTQQIDSLEREFDKTHYPDVFARERLAQKLELPE 429
Query: 100 ARIQVWFSNRRAKWRREEKLR 120
ARIQVWFSNRRAKWRREEK R
Sbjct: 430 ARIQVWFSNRRAKWRREEKFR 450
>gi|170040723|ref|XP_001848139.1| paired box protein Pax-6 [Culex quinquefasciatus]
gi|167864322|gb|EDS27705.1| paired box protein Pax-6 [Culex quinquefasciatus]
Length = 559
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/77 (80%), Positives = 68/77 (88%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+ D RL LKRKLQRNRTSFT DQI+ LEKEFERTHYPDVF+RERL++K LPEARIQVW
Sbjct: 259 DSDSERLSLKRKLQRNRTSFTVDQIEYLEKEFERTHYPDVFSRERLSSKTNLPEARIQVW 318
Query: 106 FSNRRAKWRREEKLRNQ 122
FSNRRAKWRREEK R+Q
Sbjct: 319 FSNRRAKWRREEKQRSQ 335
>gi|109288051|gb|ABG29069.1| transcription factor Pax6 [Pleurodeles waltl]
Length = 214
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 74/85 (87%), Gaps = 2/85 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 130 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 189
Query: 92 AAKIGLPEARIQVWFSNRRAKWRRE 116
AAKI LPEARIQVWFSNRRAKWRRE
Sbjct: 190 AAKIDLPEARIQVWFSNRRAKWRRE 214
>gi|51949781|gb|AAU14814.1| paired box 6 [Mustela putorius furo]
Length = 158
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 71/82 (86%), Gaps = 2/82 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 77 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 136
Query: 92 AAKIGLPEARIQVWFSNRRAKW 113
AAKI LPEARIQVWFSNRRAKW
Sbjct: 137 AAKIDLPEARIQVWFSNRRAKW 158
>gi|159163961|pdb|2CUE|A Chain A, Solution Structure Of The Homeobox Domain Of The Human
Paired Box Protein Pax-6
Length = 80
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/65 (92%), Positives = 62/65 (95%)
Query: 59 QRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
QRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEK
Sbjct: 8 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEK 67
Query: 119 LRNQR 123
LRNQR
Sbjct: 68 LRNQR 72
>gi|322789454|gb|EFZ14745.1| hypothetical protein SINV_03251 [Solenopsis invicta]
Length = 105
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Query: 20 ELDGLGSDETCTTIGDNSNPGS-NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
EL+G + + GDNSN GS + +DDQARLRLKRKLQRNRTSF+N+QID LEKEFE
Sbjct: 11 ELEGGAHSDETNSGGDNSNAGSVSGGADDDQARLRLKRKLQRNRTSFSNEQIDALEKEFE 70
Query: 79 RTHYPDVFARERLAAKIGLPEARIQV 104
RTHYPDVFARERLA KIGLPEARIQV
Sbjct: 71 RTHYPDVFARERLAGKIGLPEARIQV 96
>gi|347963087|ref|XP_566364.4| AGAP000063-PA [Anopheles gambiae str. PEST]
gi|333467366|gb|EAL41300.4| AGAP000063-PA [Anopheles gambiae str. PEST]
Length = 564
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 69/82 (84%), Gaps = 5/82 (6%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ-- 103
++D RL LKRKLQRNRTSFT DQI+ LEKEFERTHYPDVF+RERL++K LPEARIQ
Sbjct: 269 DNDTERLSLKRKLQRNRTSFTVDQIEFLEKEFERTHYPDVFSRERLSSKTNLPEARIQVS 328
Query: 104 ---VWFSNRRAKWRREEKLRNQ 122
VWFSNRRAKWRREEK R+Q
Sbjct: 329 YIEVWFSNRRAKWRREEKQRSQ 350
>gi|388442|gb|AAB27471.1| paired box Pax-6 gene product [chickens, White Leghorn, embryo,
Peptide Partial, 61 aa, segment 2 of 2]
Length = 61
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/61 (91%), Positives = 58/61 (95%)
Query: 58 LQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE 117
LQRNRTSFT +QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREE
Sbjct: 1 LQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREE 60
Query: 118 K 118
K
Sbjct: 61 K 61
>gi|440647287|dbj|BAM74250.1| Pax-6 authentic variant [Idiosepius paradoxus]
Length = 459
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 80/99 (80%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS +Q R+RLKRKLQRNRTSFT QI+ LEKEFERTHYPDVFARERLA KI LPE
Sbjct: 214 GSQCGETGEQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPE 273
Query: 100 ARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
ARIQVWFSNRRA+WRREE+LRNQR+ + T+ P N++
Sbjct: 274 ARIQVWFSNRRAEWRREERLRNQRREAANGSTRLPINSS 312
>gi|49902846|gb|AAH76068.1| Pax6b protein [Danio rerio]
Length = 384
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 65/76 (85%), Gaps = 2/76 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 203 GENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 262
Query: 92 AAKIGLPEARIQVWFS 107
AAKI LPEARIQVWFS
Sbjct: 263 AAKIDLPEARIQVWFS 278
>gi|254733072|gb|ACT79981.1| twin of eyeless, partial [Nasonia vitripennis]
Length = 203
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 56/59 (94%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQV 104
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQV
Sbjct: 140 EDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQV 198
>gi|195564338|ref|XP_002105777.1| GD24416 [Drosophila simulans]
gi|194201653|gb|EDX15229.1| GD24416 [Drosophila simulans]
Length = 342
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 56/59 (94%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQV 104
ED Q RLRLKRKLQRNRTSF+N+QID+LEKEFERTHYPDVFARERLA KIGLPEARIQV
Sbjct: 253 EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 311
>gi|4185914|emb|CAA09227.1| DtPax-6 protein [Girardia tigrina]
Length = 577
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 76/109 (69%), Gaps = 9/109 (8%)
Query: 53 RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAK 112
+L +K QR+RTSFTNDQI+ LEKEFERTHYPDVF+RE+L+ + + E RIQVWFSNRRAK
Sbjct: 319 KLSKKSQRSRTSFTNDQINLLEKEFERTHYPDVFSREKLSQNLKVAETRIQVWFSNRRAK 378
Query: 113 WRREEK--------LRNQRQRGSADPTQAPN-NNNNNIVNNNNNSSDGC 152
WRREEK + + + + +PT + +N++I+N N N C
Sbjct: 379 WRREEKSEENNMSNVMARSEMSNMEPTSGVSAASNDSILNTNTNFFSDC 427
>gi|195126164|ref|XP_002007544.1| GI12329 [Drosophila mojavensis]
gi|193919153|gb|EDW18020.1| GI12329 [Drosophila mojavensis]
Length = 593
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
Query: 42 NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
++E ED + + K +RNRT+F+ +Q+D LEKEFE++HYP V RE+LAA+ GL EAR
Sbjct: 355 DIEGEDSDSEDSDQPKFRRNRTTFSAEQLDELEKEFEKSHYPCVGTREKLAARTGLSEAR 414
Query: 102 IQVWFSNRRAKWRREEKLRNQRQRG--SADPTQAPNNNNNNI 141
+QVWFSNRRAKWRR +++ +QRG S PT AP ++
Sbjct: 415 VQVWFSNRRAKWRRHQRVNLLKQRGSTSTSPTPAPTQQEPSL 456
>gi|347963096|ref|XP_311087.5| AGAP000067-PA [Anopheles gambiae str. PEST]
gi|333467362|gb|EAA06761.5| AGAP000067-PA [Anopheles gambiae str. PEST]
Length = 313
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 59/70 (84%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED + RL+LKRKLQRNRTSFTN+QI+NLE+EFERTHYPDVFARERL+ +I LPEARIQV
Sbjct: 225 EDSELRLKLKRKLQRNRTSFTNEQIENLEREFERTHYPDVFARERLSERIQLPEARIQVM 284
Query: 106 FSNRRAKWRR 115
A+W R
Sbjct: 285 LLCPAARWLR 294
>gi|410929045|ref|XP_003977910.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Takifugu
rubripes]
Length = 388
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 76/117 (64%), Gaps = 5/117 (4%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
E+ Q RL+LKRKLQRNRTSFT +QI+NLEKEFERTHYPDVFARERLAAKI LPEARIQV
Sbjct: 217 EETQLRLQLKRKLQRNRTSFTQEQIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVM 276
Query: 106 -FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNI-VNNNNNSSDGCTPSPAPQV 160
F++ R + L N SA P NN+ + + SS C +P V
Sbjct: 277 SFTSGSMLGRPDSALTNTY---SALPPMPSFTMANNLPMQPSQTSSYSCMLPTSPPV 330
>gi|353232111|emb|CCD79466.1| putative paired box protein pax-6 [Schistosoma mansoni]
Length = 1258
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 56/61 (91%)
Query: 60 RNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
R+RTSF+N Q++ LEKEFE THYPDVF+RE+L+++I LPE RIQVWFSNRRAKWRREEK+
Sbjct: 987 RSRTSFSNLQLEELEKEFEHTHYPDVFSREKLSSRILLPETRIQVWFSNRRAKWRREEKM 1046
Query: 120 R 120
R
Sbjct: 1047 R 1047
>gi|241999742|ref|XP_002434514.1| paired box protein Pax-6, putative [Ixodes scapularis]
gi|215497844|gb|EEC07338.1| paired box protein Pax-6, putative [Ixodes scapularis]
Length = 427
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/59 (88%), Positives = 54/59 (91%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQV 104
ED Q RLRLKRKLQRNRTSF+NDQI+ LEKEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 201 EDSQMRLRLKRKLQRNRTSFSNDQIEALEKEFERTHYPDVFARERLAEKITLPEARIQV 259
>gi|197359132|gb|ACH69782.1| retinal homeobox protein 2 [Anabarilius grahami]
Length = 284
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 72/105 (68%), Gaps = 14/105 (13%)
Query: 23 GLGSDETCTTIGDNSNPGSNLE--------PEDDQARLRLKRKLQRNRTSFTNDQIDNLE 74
GL S E C T D +P SN+E P++DQ K+K +RNRT+FT Q+ LE
Sbjct: 64 GLFSTEKCDT--DLGDPRSNVESDSRSPDAPDEDQP----KKKHRRNRTTFTTYQLHELE 117
Query: 75 KEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWRR+EK+
Sbjct: 118 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKI 162
>gi|256084136|ref|XP_002578288.1| paired box protein pax-6 [Schistosoma mansoni]
Length = 307
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 56/61 (91%)
Query: 60 RNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
R+RTSF+N Q++ LEKEFE THYPDVF+RE+L+++I LPE RIQVWFSNRRAKWRREEK+
Sbjct: 36 RSRTSFSNLQLEELEKEFEHTHYPDVFSREKLSSRILLPETRIQVWFSNRRAKWRREEKM 95
Query: 120 R 120
R
Sbjct: 96 R 96
>gi|74096025|ref|NP_001027683.1| Prx1 protein [Ciona intestinalis]
gi|13444981|emb|CAC34833.1| Ci-Rx protein [Ciona intestinalis]
Length = 826
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 11/98 (11%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
LK+KL+RNRT+FT Q+ LE+ FER+HYPDV++RE LA KI LPE R+QVWF NRRAKW
Sbjct: 553 LKKKLRRNRTTFTTFQLHELERAFERSHYPDVYSREELAGKINLPEVRVQVWFQNRRAKW 612
Query: 114 RREEKLR-----------NQRQRGSADPTQAPNNNNNN 140
RR+EK+ NQ SA + PNN N
Sbjct: 613 RRQEKIESGNHEREIRNYNQATALSATVSTKPNNVQRN 650
>gi|19032236|emb|CAC85262.2| Pax-6B protein [Dugesia japonica]
Length = 579
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 58/66 (87%)
Query: 53 RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAK 112
++ +K QR+RTSFTNDQI+ LEKEFERTHYPDVF+RE+L+ + + E RIQVWFSNRRAK
Sbjct: 319 KINKKSQRSRTSFTNDQINLLEKEFERTHYPDVFSREKLSQNLKVAETRIQVWFSNRRAK 378
Query: 113 WRREEK 118
WRREEK
Sbjct: 379 WRREEK 384
>gi|242024058|ref|XP_002432447.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212517880|gb|EEB19709.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 412
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 16 TDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
T + +D + T +G ++ +N E E D+ KRK +R RT+FT+ Q++ LEK
Sbjct: 104 TKGLMIDSMAEGGTLDPVGSSNASDNNSECELDE--FAPKRKQRRYRTTFTSFQLEELEK 161
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR++EK+ Q
Sbjct: 162 AFARTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQAH 210
>gi|328706201|ref|XP_003243021.1| PREDICTED: hypothetical protein LOC100571445 [Acyrthosiphon pisum]
Length = 636
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 56/68 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q+D LEK F RTHYPDVF RE LA+KIGL EARIQVWF NRRAKWR
Sbjct: 231 KRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELASKIGLTEARIQVWFQNRRAKWR 290
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 291 KQEKVGPQ 298
>gi|195012802|ref|XP_001983750.1| GH16065 [Drosophila grimshawi]
gi|193897232|gb|EDV96098.1| GH16065 [Drosophila grimshawi]
Length = 605
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 57/136 (41%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
GS ++C + ++N ++E ED + K +RNRT+F+ +Q+D LEKEF+++HYP
Sbjct: 359 GSRDSCHSPDVDANQMIDIEGEDSDTEDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPC 418
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNN 144
V RE+LA++ L EAR+QVWFSNRRAKWRR +++ +QR SA +Q P +
Sbjct: 419 VGTREKLASRTMLSEARVQVWFSNRRAKWRRHQRVNQLKQRDSASESQTPAGATTTVPLE 478
Query: 145 NNNSSDGCTP-SPAPQ 159
+ S+ G T SP Q
Sbjct: 479 LSTSATGSTNRSPMAQ 494
>gi|70571090|dbj|BAE06677.1| transcription factor protein [Ciona intestinalis]
Length = 486
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 11/98 (11%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
LK+KL+RNRT+FT Q+ LE+ FER+HYPDV++RE LA KI LPE R+QVWF NRRAKW
Sbjct: 222 LKKKLRRNRTTFTTFQLHELERAFERSHYPDVYSREELAGKINLPEVRVQVWFQNRRAKW 281
Query: 114 RREEKLR-----------NQRQRGSADPTQAPNNNNNN 140
RR+EK+ NQ SA + PNN N
Sbjct: 282 RRQEKIESGNHEREIRNYNQATALSATVSTKPNNVQRN 319
>gi|158297213|ref|XP_317481.4| AGAP007985-PA [Anopheles gambiae str. PEST]
gi|157015086|gb|EAA12409.4| AGAP007985-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 64/89 (71%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
GD ++P S+ +D KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 55 GDPNSPLSDPHSDDGGDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 114
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
KIGL EARIQVWF NRRAKWR++EK+ Q
Sbjct: 115 KIGLTEARIQVWFQNRRAKWRKQEKVGPQ 143
>gi|167234447|ref|NP_001107838.1| aristaless [Tribolium castaneum]
Length = 309
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 35 DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAK 94
DNS+ GS+ EP++ KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA K
Sbjct: 76 DNSD-GSDPEPDE----FAPKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMK 130
Query: 95 IGLPEARIQVWFSNRRAKWRREEKLRNQ 122
IGL EARIQVWF NRRAKWR++EK+ Q
Sbjct: 131 IGLTEARIQVWFQNRRAKWRKQEKVGPQ 158
>gi|195433002|ref|XP_002064504.1| GK23788 [Drosophila willistoni]
gi|194160589|gb|EDW75490.1| GK23788 [Drosophila willistoni]
Length = 375
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Query: 22 DGLGSDETCTT--IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFER 79
G+GS T + G ++P S+ + + KRK +R RT+FT+ Q++ LEK F R
Sbjct: 31 SGVGSAVTAPSGASGGTNSPISDANSDCETDEYAPKRKQRRYRTTFTSFQLEELEKAFSR 90
Query: 80 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
THYPDVF RE LA KIGL EARIQVWF NRRAKWR++EK+ Q
Sbjct: 91 THYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQ 133
>gi|424034|pir||A46403 transcription factor with prd-type homeo domain and Pro/ Gln-rich
domain al - fruit fly (Drosophila melanogaster)
Length = 384
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 82 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 141
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 142 KQEKVGPQ 149
>gi|24158435|ref|NP_571400.1| paired box 7 isoform 1 [Danio rerio]
gi|2909769|gb|AAC41255.1| transcription factor PAX7C [Danio rerio]
gi|122891363|emb|CAM12909.1| paired box gene 7 [Danio rerio]
gi|190337573|gb|AAI63502.1| Paired box gene 7a [Danio rerio]
gi|190337587|gb|AAI63523.1| Paired box gene 7a [Danio rerio]
Length = 507
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 188 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 299
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P + + + + SS P P P SM
Sbjct: 300 MPTLPTYQLPESTYPSTTLSQDGSSTLHRPQPLPPSSM 337
>gi|24158437|ref|NP_571407.1| paired box 7 isoform 2 [Danio rerio]
gi|2909771|gb|AAC41256.1| transcription factor PAX7D [Danio rerio]
Length = 487
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 188 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 299
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P + + + + SS P P P SM
Sbjct: 300 MPTLPTYQLPESTYPSTTLSQDGSSTLHRPQPLPPSSM 337
>gi|260829653|ref|XP_002609776.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
gi|229295138|gb|EEN65786.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
Length = 184
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 62/86 (72%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA KI LPE R+QVWF NRRAKW
Sbjct: 1 MKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELAMKINLPEVRVQVWFQNRRAKW 60
Query: 114 RREEKLRNQRQRGSADPTQAPNNNNN 139
RR+EK+ Q + P A N+ N
Sbjct: 61 RRQEKIEAQTMKLHDYPMAALNHVRN 86
>gi|14456459|gb|AAG41494.1| paired box 6 [Equus caballus]
Length = 53
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 51/53 (96%)
Query: 69 QIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
QI+ LEKEFERTHYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRN
Sbjct: 1 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 53
>gi|381216188|gb|AFF61354.1| paired box protein 7 beta variant 4 [Oncorhynchus mykiss]
Length = 505
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 187 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 298
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 299 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 336
>gi|381216178|gb|AFF61349.1| paired box protein 7 alpha variant 3 [Oncorhynchus mykiss]
Length = 506
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 188 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 299
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 300 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 337
>gi|381216194|gb|AFF61357.1| paired box protein 7 beta variant 7 [Oncorhynchus mykiss]
Length = 501
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 294
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 295 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 332
>gi|195032675|ref|XP_001988540.1| GH11220 [Drosophila grimshawi]
gi|193904540|gb|EDW03407.1| GH11220 [Drosophila grimshawi]
Length = 376
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 37 SNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIG 96
S+P S+ E DD A KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIG
Sbjct: 53 SDPNSDCE-VDDYAP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIG 108
Query: 97 LPEARIQVWFSNRRAKWRREEKLRNQ 122
L EARIQVWF NRRAKWR++EK+ Q
Sbjct: 109 LTEARIQVWFQNRRAKWRKQEKVGPQ 134
>gi|18859337|ref|NP_571301.1| retinal homeobox protein Rx2 [Danio rerio]
gi|18202035|sp|O42357.1|RX2_DANRE RecName: Full=Retinal homeobox protein Rx2
gi|2240028|gb|AAB62326.1| retinal homeobox protein [Danio rerio]
Length = 327
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 71/105 (67%), Gaps = 14/105 (13%)
Query: 23 GLGSDETCTTIGDNSNPGSNLE--------PEDDQARLRLKRKLQRNRTSFTNDQIDNLE 74
GL S + C D +P SN+E P++DQ K+K +RNRT+FT Q+ LE
Sbjct: 98 GLFSTDKCD--ADLGDPRSNVESDSRSPDIPDEDQP----KKKHRRNRTTFTTYQLHELE 151
Query: 75 KEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWRR+EK+
Sbjct: 152 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKM 196
>gi|402479293|gb|AFQ55891.1| RAX homeobox protein [Branchiostoma floridae]
Length = 318
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 72/117 (61%), Gaps = 6/117 (5%)
Query: 23 GLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHY 82
G G+ ET D + E E Q +K+K +RNRT+FT Q+ LE+ FE++HY
Sbjct: 110 GNGAAETAEDADDRA------EDEKTQVGEDMKKKHRRNRTTFTTFQLHELERAFEKSHY 163
Query: 83 PDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNN 139
PDV++RE LA KI LPE R+QVWF NRRAKWRR+EK+ Q + P A N+ N
Sbjct: 164 PDVYSREELAMKINLPEVRVQVWFQNRRAKWRRQEKIEAQTMKLHDYPMAALNHVRN 220
>gi|195118282|ref|XP_002003669.1| GI21624 [Drosophila mojavensis]
gi|193914244|gb|EDW13111.1| GI21624 [Drosophila mojavensis]
Length = 397
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 69 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 128
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 129 KQEKVGPQ 136
>gi|144369326|dbj|BAF56221.1| Pax-C [Anthopleura japonica]
Length = 462
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 76/103 (73%), Gaps = 3/103 (2%)
Query: 19 IELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
I++D ++++ ++ D S+ ++ +D QA KRKL+RNRT+F+ DQ++ LEKEFE
Sbjct: 283 IKVDDASTNDS-VSVHDVSSDDERIKTDDIQASQ--KRKLRRNRTTFSPDQLEMLEKEFE 339
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
++HYPDV RE LA KI + EAR+QVWFSNRRAKWRR +K+ N
Sbjct: 340 KSHYPDVATREDLANKIDMSEARVQVWFSNRRAKWRRHQKIAN 382
>gi|195350083|ref|XP_002041571.1| GM16736 [Drosophila sechellia]
gi|195575531|ref|XP_002077631.1| GD23020 [Drosophila simulans]
gi|194123344|gb|EDW45387.1| GM16736 [Drosophila sechellia]
gi|194189640|gb|EDX03216.1| GD23020 [Drosophila simulans]
Length = 410
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 82 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 141
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 142 KQEKVGPQ 149
>gi|290262|gb|AAA28840.1| prd-like homeobox protein [Drosophila melanogaster]
Length = 408
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 82 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 141
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 142 KQEKVGPQ 149
>gi|24580629|ref|NP_722629.1| aristaless [Drosophila melanogaster]
gi|60416352|sp|Q06453.2|AL_DROME RecName: Full=Homeobox protein aristaless
gi|7296213|gb|AAF51505.1| aristaless [Drosophila melanogaster]
gi|21464440|gb|AAM52023.1| RE68460p [Drosophila melanogaster]
gi|220942482|gb|ACL83784.1| al-PA [synthetic construct]
gi|220952686|gb|ACL88886.1| al-PA [synthetic construct]
Length = 408
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 82 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 141
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 142 KQEKVGPQ 149
>gi|24158480|ref|NP_571401.1| paired box 7 isoform 3 [Danio rerio]
gi|2909773|gb|AAC41257.1| transcription factor PAX7E [Danio rerio]
Length = 395
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 188 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 299
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P + + + + SS P P P SM
Sbjct: 300 MPTLPTYQLPESTYPSTTLSQDGSSTLHRPQPLPPSSM 337
>gi|195388310|ref|XP_002052823.1| GJ17771 [Drosophila virilis]
gi|194149280|gb|EDW64978.1| GJ17771 [Drosophila virilis]
Length = 381
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 69 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 128
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 129 KQEKVGPQ 136
>gi|190337567|gb|AAI63492.1| Paired box gene 7a [Danio rerio]
Length = 395
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 188 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 299
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P + + + + SS P P P SM
Sbjct: 300 MPTLPTYQLPESTYPSTTLSQDGSSTLHRPQPLPPSSM 337
>gi|195470248|ref|XP_002087420.1| GE16769 [Drosophila yakuba]
gi|194173521|gb|EDW87132.1| GE16769 [Drosophila yakuba]
Length = 410
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 82 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 141
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 142 KQEKVGPQ 149
>gi|85719151|dbj|BAE78538.1| aristaless [Harmonia axyridis]
Length = 314
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 11/98 (11%)
Query: 33 IGDNSNPGSNLEPEDDQA-----------RLRLKRKLQRNRTSFTNDQIDNLEKEFERTH 81
I + P + +EP QA KRK +R RT+FT+ Q++ LEK F RTH
Sbjct: 60 ISEEITPSAGIEPRTLQADQSDGSEAETDEFAPKRKQRRYRTTFTSYQLEELEKAFSRTH 119
Query: 82 YPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
YPDVF RE LA KIGL EARIQVWF NRRAKWR++EK+
Sbjct: 120 YPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV 157
>gi|340378028|ref|XP_003387530.1| PREDICTED: retinal homeobox protein Rx-A-like [Amphimedon
queenslandica]
Length = 296
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+ + + + K +RNRT+FT Q+D LE F +THYPDV RE+LA +IGLPE+R+QVW
Sbjct: 66 QSPKGSVNIIMKSKRNRTTFTAHQLDELEMIFRQTHYPDVLLREKLAQRIGLPESRVQVW 125
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAP 158
F NRRAKWR+ EKL +AD +NN++I ++N + S P+ P
Sbjct: 126 FQNRRAKWRKREKL-----IAAADAQMKALSNNHSIHHSNPSPSLSIPPAATP 173
>gi|194853423|ref|XP_001968163.1| GG24714 [Drosophila erecta]
gi|190660030|gb|EDV57222.1| GG24714 [Drosophila erecta]
Length = 416
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 88 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 147
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 148 KQEKVGPQ 155
>gi|195147252|ref|XP_002014594.1| GL18872 [Drosophila persimilis]
gi|194106547|gb|EDW28590.1| GL18872 [Drosophila persimilis]
Length = 397
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 80 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 139
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 140 KQEKVGPQ 147
>gi|125985361|ref|XP_001356444.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
gi|54644768|gb|EAL33508.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 80 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 139
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 140 KQEKVGPQ 147
>gi|296222754|ref|XP_002757333.1| PREDICTED: retinal homeobox protein Rx [Callithrix jacchus]
Length = 344
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|194766533|ref|XP_001965379.1| GF20646 [Drosophila ananassae]
gi|190617989|gb|EDV33513.1| GF20646 [Drosophila ananassae]
Length = 405
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 79 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 138
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 139 KQEKVGPQ 146
>gi|53125966|emb|CAG25714.1| paired box protein 7 [Salvelinus alpinus]
Length = 505
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 72/99 (72%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 187 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 239 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 277
>gi|395830733|ref|XP_003788473.1| PREDICTED: retinal homeobox protein Rx [Otolemur garnettii]
Length = 344
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
NPG + P A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 NPGLPVGPATGDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|313234194|emb|CBY10262.1| unnamed protein product [Oikopleura dioica]
Length = 444
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Query: 37 SNPGSNLEPE----DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
++PGS+ + E +D+ L LKRK +R+RT+F+ +Q+D LEK FERTHYPD++ RE LA
Sbjct: 141 ADPGSDEKSENSEDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYTREELA 200
Query: 93 AKIGLPEARIQVWFSNRRAKWRRE 116
+ GL EAR+QVWFSNRRA+WR++
Sbjct: 201 GRTGLSEARVQVWFSNRRARWRKQ 224
>gi|56714087|gb|AAW24014.1| homeodomain protein Pax37b [Oikopleura dioica]
Length = 444
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Query: 37 SNPGSNLEPE----DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
++PGS+ + E +D+ L LKRK +R+RT+F+ +Q+D LEK FERTHYPD++ RE LA
Sbjct: 141 ADPGSDEKSENSEDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYTREELA 200
Query: 93 AKIGLPEARIQVWFSNRRAKWRRE 116
+ GL EAR+QVWFSNRRA+WR++
Sbjct: 201 GRTGLSEARVQVWFSNRRARWRKQ 224
>gi|7335704|gb|AAC15711.2| PaxC transcription factor [Acropora millepora]
Length = 464
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 62/76 (81%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
ED+ + KRK++RNRT+F+ +Q++ LEKEFE++HYPDV RE LA+KI + EAR+QVW
Sbjct: 312 EDNDVQANQKRKIRRNRTTFSPEQLEMLEKEFEKSHYPDVATREELASKIDMSEARVQVW 371
Query: 106 FSNRRAKWRREEKLRN 121
FSNRRAKWRR +K+ N
Sbjct: 372 FSNRRAKWRRHQKINN 387
>gi|345491839|ref|XP_001607712.2| PREDICTED: aristaless-related homeobox protein-like [Nasonia
vitripennis]
Length = 421
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 5/84 (5%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 160 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 219
Query: 115 REEKLRNQRQ-----RGSADPTQA 133
++EK+ Q G+ PT A
Sbjct: 220 KQEKVGPQGHPYNPYLGAGAPTSA 243
>gi|313240394|emb|CBY32733.1| unnamed protein product [Oikopleura dioica]
Length = 468
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Query: 37 SNPGSNLEPE----DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
++PGS+ + E +D+ L LKRK +R+RT+F+ +Q+D LEK FERTHYPD++ RE LA
Sbjct: 165 ADPGSDEKSENSEDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYTREELA 224
Query: 93 AKIGLPEARIQVWFSNRRAKWRRE 116
+ GL EAR+QVWFSNRRA+WR++
Sbjct: 225 GRTGLSEARVQVWFSNRRARWRKQ 248
>gi|402903228|ref|XP_003914478.1| PREDICTED: retinal homeobox protein Rx [Papio anubis]
Length = 386
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 151 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 210
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 211 KVNLPEVRVQVWFQNRRAKWRRQEKL 236
>gi|186680510|gb|ACC86106.1| paired box protein 7 [Sternopygus macrurus]
Length = 507
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 188 KHSIDGILGDK-----GHRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR-----EEKLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR+ + N G PT
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKRAGANQLAAFNHLLPGGFPPTG 299
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P + + + SS P P P SM
Sbjct: 300 MPTLPTYQLPETTYPSTTLSQDGSSTLHRPQPLPPSSM 337
>gi|119393903|gb|ABL74454.1| Pax 3/7B [Helobdella sp. MS-2000]
Length = 444
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 56/65 (86%)
Query: 52 LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRA 111
++L RK +RNRT+FT+DQ++ LEK FERTHYPDV+ RE LAAK G EARIQVWFSNRRA
Sbjct: 379 MKLSRKQRRNRTTFTSDQLELLEKSFERTHYPDVYTREDLAAKTGFTEARIQVWFSNRRA 438
Query: 112 KWRRE 116
+WR++
Sbjct: 439 RWRKQ 443
>gi|195119474|ref|XP_002004256.1| GI19710 [Drosophila mojavensis]
gi|193909324|gb|EDW08191.1| GI19710 [Drosophila mojavensis]
Length = 884
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 532 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 588
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 589 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 629
>gi|195153960|ref|XP_002017891.1| GL17060 [Drosophila persimilis]
gi|194113687|gb|EDW35730.1| GL17060 [Drosophila persimilis]
Length = 920
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 539 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 595
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 596 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 636
>gi|195456001|ref|XP_002074959.1| GK23335 [Drosophila willistoni]
gi|194171044|gb|EDW85945.1| GK23335 [Drosophila willistoni]
Length = 937
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 574 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 630
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 631 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 671
>gi|198458256|ref|XP_001360971.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
gi|198136277|gb|EAL25547.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
Length = 921
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 540 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 596
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 597 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 637
>gi|28573580|ref|NP_726006.2| retinal homeobox [Drosophila melanogaster]
gi|17380504|sp|Q9W2Q1.2|RX_DROME RecName: Full=Retinal homeobox protein Rx; Short=DRx; Short=DRx1
gi|21392130|gb|AAM48419.1| RE39020p [Drosophila melanogaster]
gi|28380638|gb|AAF46639.3| retinal homeobox [Drosophila melanogaster]
gi|220960168|gb|ACL92620.1| Rx-PA [synthetic construct]
Length = 873
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 507 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 563
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 564 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 604
>gi|281485132|gb|ADA70356.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 265
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 57/76 (75%)
Query: 47 DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWF 106
DD KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF
Sbjct: 38 DDADEFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWF 97
Query: 107 SNRRAKWRREEKLRNQ 122
NRRAKWR++EK+ Q
Sbjct: 98 QNRRAKWRKQEKVGPQ 113
>gi|310893853|gb|ADP37890.1| paired-domain transcription factor Pax3/7-A [Lethenteron
camtschaticum]
Length = 507
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 70/99 (70%), Gaps = 7/99 (7%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ +T+ D+S+ D + L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 179 KHSIDGILGDKAGSTVEDSSD-------VDSEPDLPLKRKQRRSRTTFTAEQLEELEKAF 231
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 232 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 270
>gi|109122304|ref|XP_001087324.1| PREDICTED: retinal homeobox protein Rx [Macaca mulatta]
Length = 347
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|15625548|gb|AAL04156.1|AF411465_1 transcription factor Pax7 [Petromyzon marinus]
Length = 505
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 70/99 (70%), Gaps = 7/99 (7%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ +T+ D+S+ D + L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 177 KHSIDGILGDKAGSTVEDSSD-------VDSEPDLPLKRKQRRSRTTFTAEQLEELEKAF 229
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 230 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 268
>gi|343469157|gb|AEM43807.1| retina and anterior neural fold homeobox 2b [Xenopus laevis]
Length = 228
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 62/88 (70%), Gaps = 4/88 (4%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G PG+ PE + +L K+ +RNRT+FT Q+ LE FER+HYPDV++RE LA
Sbjct: 17 GSTPTPGT---PEGEDYKLPTKKH-RRNRTTFTTYQLHELEHAFERSHYPDVYSREELAM 72
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRN 121
K+ LPE R+QVWF NRRAKWRR+EKL +
Sbjct: 73 KVSLPEVRVQVWFQNRRAKWRRQEKLES 100
>gi|403268181|ref|XP_003926160.1| PREDICTED: retinal homeobox protein Rx [Saimiri boliviensis
boliviensis]
Length = 282
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLPVGPATGEAKLSEEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|195486714|ref|XP_002091622.1| GE12148 [Drosophila yakuba]
gi|194177723|gb|EDW91334.1| GE12148 [Drosophila yakuba]
Length = 906
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 540 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 596
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 597 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 637
>gi|195346236|ref|XP_002039672.1| GM15784 [Drosophila sechellia]
gi|194135021|gb|EDW56537.1| GM15784 [Drosophila sechellia]
Length = 895
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 529 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 585
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 586 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 626
>gi|156387437|ref|XP_001634210.1| predicted protein [Nematostella vectensis]
gi|156221290|gb|EDO42147.1| predicted protein [Nematostella vectensis]
gi|295389204|gb|ADG03432.1| retinal homeobox [Nematostella vectensis]
Length = 266
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
+SN G + E + D + K+KL+RNRT+FT Q+ LE+ FE++HYPDV+ RE LA KI
Sbjct: 67 SSNDGKSDEADGDSS----KKKLRRNRTTFTTFQLHELERAFEKSHYPDVYTREELALKI 122
Query: 96 GLPEARIQVWFSNRRAKWRREEKL 119
LPE R+QVWF N+RAKWRREEK+
Sbjct: 123 SLPEVRVQVWFQNKRAKWRREEKM 146
>gi|351699331|gb|EHB02250.1| Retinal homeobox protein Rx, partial [Heterocephalus glaber]
Length = 211
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
NPG + P A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 NPGLPVGPATGDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|426386097|ref|XP_004059529.1| PREDICTED: retinal homeobox protein Rx [Gorilla gorilla gorilla]
Length = 346
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|126116581|ref|NP_038463.2| retinal homeobox protein Rx [Homo sapiens]
gi|296452886|sp|Q9Y2V3.2|RX_HUMAN RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|119583497|gb|EAW63093.1| retina and anterior neural fold homeobox [Homo sapiens]
gi|162317600|gb|AAI56202.1| Retina and anterior neural fold homeobox [synthetic construct]
gi|162318774|gb|AAI57123.1| Retina and anterior neural fold homeobox [synthetic construct]
Length = 346
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|114673345|ref|XP_001142510.1| PREDICTED: retinal homeobox protein Rx isoform 2 [Pan troglodytes]
Length = 346
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|395749930|ref|XP_003779033.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pongo
abelii]
Length = 346
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|340709231|ref|XP_003393215.1| PREDICTED: homeobox protein aristaless-like [Bombus terrestris]
Length = 280
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 36 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 95
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 96 KQEKVGPQ 103
>gi|56785872|gb|AAW29068.1| homeodomain transcription factor PaxC [Nematostella vectensis]
Length = 458
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 57/67 (85%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRKL+RNRT+FT DQ++ LEKEFE++HYPDV RE LA KI + EAR+QVWFSNRRAKWR
Sbjct: 317 KRKLRRNRTTFTPDQLEMLEKEFEKSHYPDVATREELANKIDMSEARVQVWFSNRRAKWR 376
Query: 115 REEKLRN 121
R +K+ N
Sbjct: 377 RHQKINN 383
>gi|432891029|ref|XP_004075513.1| PREDICTED: paired box protein Pax-3-like [Oryzias latipes]
Length = 495
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 90/152 (59%), Gaps = 6/152 (3%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K ++G+ D + + +S+ GS++E E D L LKRK +R+RT+FT +Q+D LE+ F
Sbjct: 188 KHSIEGILGDRSPKS--SHSDDGSDVESEPD---LPLKRKQRRSRTTFTAEQLDELERAF 242
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNN 137
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ P P +
Sbjct: 243 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQMMAFNHLIPGGFPASA 302
Query: 138 NNNIVNNNNNSSDGCTPSPAPQVSMDPTDFNR 169
++I + S T S A QVS P+ +R
Sbjct: 303 MSSIPPYQLSDSTYSTSSIA-QVSEPPSTVHR 333
>gi|194881725|ref|XP_001974972.1| GG22067 [Drosophila erecta]
gi|190658159|gb|EDV55372.1| GG22067 [Drosophila erecta]
Length = 898
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 532 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 588
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 589 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 629
>gi|350425133|ref|XP_003494022.1| PREDICTED: homeobox protein ARX-like [Bombus impatiens]
Length = 385
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 154 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 213
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 214 KQEKVGPQ 221
>gi|301624284|ref|XP_002941436.1| PREDICTED: retinal homeobox protein Rx1-like [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G PG+ PE + L K+K +RNRT+FT Q+ LE+ FER+HYPDV++RE LA
Sbjct: 16 GSTPTPGT---PEGEDNELP-KKKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAM 71
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 72 KVSLPEVRVQVWFQNRRAKWRRQEKL 97
>gi|259013307|ref|NP_001158375.1| retina and anterior neural fold homeobox [Saccoglossus kowalevskii]
gi|32307771|gb|AAP79282.1| retinal homeobox [Saccoglossus kowalevskii]
Length = 353
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 59/79 (74%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 142 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 201
Query: 115 REEKLRNQRQRGSADPTQA 133
R+EK+ Q+ + P A
Sbjct: 202 RQEKMEAQQMKLQEYPMTA 220
>gi|4566741|gb|AAD23438.1|AF115392_1 retinal homeobox protein RX [Homo sapiens]
Length = 346
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|156377156|ref|XP_001630723.1| predicted protein [Nematostella vectensis]
gi|156217749|gb|EDO38660.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 57/67 (85%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRKL+RNRT+FT DQ++ LEKEFE++HYPDV RE LA KI + EAR+QVWFSNRRAKWR
Sbjct: 326 KRKLRRNRTTFTPDQLEMLEKEFEKSHYPDVATREELANKIDMSEARVQVWFSNRRAKWR 385
Query: 115 REEKLRN 121
R +K+ N
Sbjct: 386 RHQKINN 392
>gi|441603513|ref|XP_004093153.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Nomascus leucogenys]
Length = 337
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGQPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|195585235|ref|XP_002082395.1| GD11547 [Drosophila simulans]
gi|194194404|gb|EDX07980.1| GD11547 [Drosophila simulans]
Length = 903
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 537 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 593
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 594 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 634
>gi|213623642|gb|AAI70015.1| Retinal homeobox-like transcription factor [Xenopus laevis]
gi|213625185|gb|AAI70013.1| Retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query: 30 CTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARE 89
C D S P ED++ K+K +RNRT+FT Q+ LE+ FER+HYPDV++RE
Sbjct: 11 CDLREDGSTPTRGTPEEDNEIP---KKKHRRNRTTFTTYQLHELERAFERSHYPDVYSRE 67
Query: 90 RLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
LA K+ LPE R+QVWF NRRAKWRR+EKL +
Sbjct: 68 ELAMKVSLPEVRVQVWFQNRRAKWRRQEKLES 99
>gi|148227630|ref|NP_001089185.1| retina and anterior neural fold homeobox 2 [Xenopus laevis]
gi|86440325|gb|ABC96115.1| retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query: 30 CTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARE 89
C D S P ED++ K+K +RNRT+FT Q+ LE+ FER+HYPDV++RE
Sbjct: 11 CDLREDGSTPTRGTPEEDNEIP---KKKHRRNRTTFTTYQLHELERAFERSHYPDVYSRE 67
Query: 90 RLAAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
LA K+ LPE R+QVWF NRRAKWRR+EKL +
Sbjct: 68 ELAMKVSLPEVRVQVWFQNRRAKWRRQEKLES 99
>gi|426222842|ref|XP_004005591.1| PREDICTED: paired box protein Pax-7 [Ovis aries]
Length = 805
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/117 (47%), Positives = 75/117 (64%), Gaps = 8/117 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 493 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 544
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR + N G PT P
Sbjct: 545 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRNQLAAFNHLLPGGFPPTGMP 601
>gi|397514171|ref|XP_003827369.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pan
paniscus]
Length = 309
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 120 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 179
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 180 KVNLPEVRVQVWFQNRRAKWRRQEKL 205
>gi|2950355|emb|CAA11241.1| homebox protein DRx [Drosophila melanogaster]
Length = 902
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 538 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 594
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 595 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 635
>gi|395831671|ref|XP_003788918.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Otolemur garnettii]
Length = 184
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 9/90 (10%)
Query: 38 NPGSNLEPED------DQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
NPG L PE D+A K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE L
Sbjct: 4 NPGEGLAPEGGGLGPGDEAP---KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREEL 60
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRN 121
AAK+ LPE R+QVWF NRRAKWRR+E+L +
Sbjct: 61 AAKVHLPEVRVQVWFQNRRAKWRRQERLES 90
>gi|357614288|gb|EHJ69004.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 341
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 57/76 (75%)
Query: 47 DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWF 106
DD KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF
Sbjct: 115 DDPDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWF 174
Query: 107 SNRRAKWRREEKLRNQ 122
NRRAKWR++EK+ Q
Sbjct: 175 QNRRAKWRKQEKVGPQ 190
>gi|402853155|ref|XP_003891265.1| PREDICTED: paired box protein Pax-7 [Papio anubis]
Length = 504
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 182 KHSIDGILGDKAS---GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 235
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 236 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 274
>gi|281485128|gb|ADA70354.1| paired-like family homeodomain transcription factor [Junonia
coenia]
Length = 264
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 44 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 103
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 104 KQEKVGPQ 111
>gi|195029469|ref|XP_001987595.1| GH22006 [Drosophila grimshawi]
gi|193903595|gb|EDW02462.1| GH22006 [Drosophila grimshawi]
Length = 879
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +D+ K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 523 GEKITSGSDDEGQDENCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 579
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 580 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 620
>gi|403287533|ref|XP_003934998.1| PREDICTED: paired box protein Pax-7 [Saimiri boliviensis
boliviensis]
Length = 502
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 296
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P++ + + + S P P P +M
Sbjct: 297 MPTLPPYQLPDSTYSTTTISQDGGSTVHRPQPLPPSTM 334
>gi|353232519|emb|CCD79874.1| putative paired box protein pax-6 [Schistosoma mansoni]
Length = 1368
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 50 ARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNR 109
+L +K RNRT+FT +Q++ LE+EFERTHYPD+ RE+LA + +PE+RIQVWFSNR
Sbjct: 752 GKLNDNKKPGRNRTTFTPEQLEILEEEFERTHYPDLIIREQLAESMLIPESRIQVWFSNR 811
Query: 110 RAKWRREEK-LRNQRQRGSADPTQAPNNNNN 139
RAKWRRE K L N +Q S P+ NN++N
Sbjct: 812 RAKWRREGKELHNNKQDQSNSPSLDDNNHSN 842
>gi|281485130|gb|ADA70355.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 259
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 35 DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAK 94
D GS ++ ED +RK +R RT+FT+ Q+D LEK F RTHYPDVF RE LA K
Sbjct: 20 DRPGSGSGMDDEDIP-----RRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALK 74
Query: 95 IGLPEARIQVWFSNRRAKWRREEKL 119
IGL EARIQVWF NRRAKWR++EK+
Sbjct: 75 IGLTEARIQVWFQNRRAKWRKQEKV 99
>gi|397486749|ref|XP_003814486.1| PREDICTED: paired box protein Pax-7 [Pan paniscus]
Length = 505
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRPDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
niloticus]
Length = 355
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 37 SNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIG 96
S+ G + EP D+ + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+
Sbjct: 125 SDEGKSPEPSKDE---QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVN 181
Query: 97 LPEARIQVWFSNRRAKWRREEKL 119
LPE R+QVWF NRRAKWRR+EK+
Sbjct: 182 LPEVRVQVWFQNRRAKWRRQEKM 204
>gi|410977842|ref|XP_003995309.1| PREDICTED: retinal homeobox protein Rx [Felis catus]
Length = 390
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLPIGPATSDAKLSDEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|301626098|ref|XP_002942235.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 502
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 184 KHSIDGILGDK-----GNRIDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 235
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 236 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 274
>gi|86355081|dbj|BAE78775.1| paired box containing Pax7 [Pelodiscus sinensis]
Length = 436
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 117 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 168
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 169 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 207
>gi|156547635|ref|XP_001603937.1| PREDICTED: retinal homeobox protein Rx-A-like [Nasonia vitripennis]
Length = 306
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 7/95 (7%)
Query: 29 TCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFAR 88
+C + G NS L P ++ K+K +RNRT+FT Q+ LE+ FE++HYPDV++R
Sbjct: 68 SCNSTGGNSE--DELSPSIEK-----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 120
Query: 89 ERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR 123
E LA K+ LPE R+QVWF NRRAKWRR+EK+ R
Sbjct: 121 EELAIKVQLPEVRVQVWFQNRRAKWRRQEKMEAAR 155
>gi|158292555|ref|XP_313972.3| AGAP005096-PA [Anopheles gambiae str. PEST]
gi|157017047|gb|EAA09363.3| AGAP005096-PA [Anopheles gambiae str. PEST]
Length = 898
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Query: 29 TCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFAR 88
T + G+ GS+ E DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++R
Sbjct: 523 TSSEQGEKVGSGSDDEGGDDNCS---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 579
Query: 89 ERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR 123
E LA K+ LPE R+QVWF NRRAKWRR+EK + R
Sbjct: 580 EELAMKVNLPEVRVQVWFQNRRAKWRRQEKSESLR 614
>gi|328792237|ref|XP_624630.3| PREDICTED: homeobox protein aristaless-like isoform 2 [Apis
mellifera]
Length = 259
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 36 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 95
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 96 KQEKVGPQ 103
>gi|357614287|gb|EHJ69003.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 258
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 35 DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAK 94
D GS ++ ED +RK +R RT+FT+ Q+D LEK F RTHYPDVF RE LA K
Sbjct: 20 DRPGSGSGVDDEDIP-----RRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALK 74
Query: 95 IGLPEARIQVWFSNRRAKWRREEKL 119
IGL EARIQVWF NRRAKWR++EK+
Sbjct: 75 IGLTEARIQVWFQNRRAKWRKQEKV 99
>gi|383865116|ref|XP_003708021.1| PREDICTED: homeobox protein aristaless-like [Megachile rotundata]
Length = 261
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 37 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 96
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 97 KQEKVGPQ 104
>gi|395821127|ref|XP_003783899.1| PREDICTED: paired box protein Pax-7 [Otolemur garnettii]
Length = 505
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|281339716|gb|EFB15300.1| hypothetical protein PANDA_014123 [Ailuropoda melanoleuca]
Length = 219
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 4/85 (4%)
Query: 39 PGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAK 94
PG + P A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K
Sbjct: 113 PGLPVGPATGDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGK 172
Query: 95 IGLPEARIQVWFSNRRAKWRREEKL 119
+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 173 VNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|94404551|gb|ABF17938.1| Pax7 variant [Gallus gallus]
Length = 502
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|328718969|ref|XP_001942532.2| PREDICTED: hypothetical protein LOC100165522 [Acyrthosiphon pisum]
Length = 691
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 10/107 (9%)
Query: 22 DGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTH 81
DG G + C ++ GS E + K +RNRT+F+ DQ+D LEKEF+++H
Sbjct: 298 DGSGGVDGCKDDMESVGSGSGSE----------QPKFRRNRTTFSPDQLDELEKEFDKSH 347
Query: 82 YPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSA 128
YP V RERLAAK L EAR+QVWFSNRRAKWRR +++ R+ G A
Sbjct: 348 YPCVSTRERLAAKTSLSEARVQVWFSNRRAKWRRHQRMNKSRRSGVA 394
>gi|449275903|gb|EMC84639.1| Paired box protein Pax-7 [Columba livia]
Length = 524
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|270210217|gb|ACX30667.2| aristaless 2 [Junonia coenia]
Length = 212
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
+RK +R RT+FT+ Q+D LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 9 RRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWFQNRRAKWR 68
Query: 115 REEKL 119
++EK+
Sbjct: 69 KQEKV 73
>gi|45384216|ref|NP_990396.1| paired box protein Pax-7 [Gallus gallus]
gi|2576239|dbj|BAA23005.1| PAX7 protein [Gallus gallus]
Length = 524
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|358418744|ref|XP_003584036.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G S PG + E++Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 117 GGPSAPGDSKLLEEEQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 172
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 173 KVNLPEVRVQVWFQNRRAKWRRQEKL 198
>gi|296206868|ref|XP_002750384.1| PREDICTED: paired box protein Pax-7 [Callithrix jacchus]
Length = 502
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|18138024|emb|CAC80514.1| paired box protein [Mus musculus]
Length = 292
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 257
Query: 92 AAKIGLPEARIQ 103
AAKI LPEARIQ
Sbjct: 258 AAKIDLPEARIQ 269
>gi|76153446|gb|AAX25074.2| SJCHGC08845 protein [Schistosoma japonicum]
Length = 262
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 55/60 (91%)
Query: 61 NRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR 120
+RTSF+N Q++ LE+EFE THYPDVF+RE+L+++I LPE RIQVWFSNRRAKWRREEK+R
Sbjct: 19 SRTSFSNLQLEELEREFEHTHYPDVFSREKLSSRILLPEPRIQVWFSNRRAKWRREEKMR 78
>gi|108998495|ref|XP_001091106.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Macaca mulatta]
Length = 505
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|41581181|emb|CAF02090.1| paired box protein 7 [Salmo salar]
Length = 519
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 65/158 (41%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 201 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 252
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRAKWR++ N G PT
Sbjct: 253 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAKWRKQAGANQLAAFNHLLPGGFPPTG 312
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 313 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 350
>gi|359079339|ref|XP_003587831.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G S PG + E++Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 117 GGPSAPGDSKLLEEEQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 172
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 173 KVNLPEVRVQVWFQNRRAKWRRQEKL 198
>gi|213626247|gb|AAI70120.1| LOC496378 protein [Xenopus laevis]
Length = 501
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 91/158 (57%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRIDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 296
Query: 133 APNNNNNNIVNNNNNSSD-----GCT---PSPAPQVSM 162
P + + +++ +++ G T P P P SM
Sbjct: 297 MPALPHYQLPDSSYSAASLGQDVGSTVHRPQPLPPSSM 334
>gi|444728104|gb|ELW68568.1| Paired box protein Pax-7 [Tupaia chinensis]
Length = 486
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 166 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 217
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 218 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 256
>gi|410966276|ref|XP_003989659.1| PREDICTED: paired box protein Pax-7 [Felis catus]
Length = 503
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|291399413|ref|XP_002716105.1| PREDICTED: paired box 7 [Oryctolagus cuniculus]
Length = 497
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 177 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 228
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 229 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 267
>gi|148226698|ref|NP_001088995.1| paired box 7 [Xenopus laevis]
gi|52082690|gb|AAU25938.1| myogenic specification paired-box transcription factor Pax7
[Xenopus laevis]
Length = 500
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 91/158 (57%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 184 KHSIDGILGDK-----GNRIDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 235
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 236 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 295
Query: 133 APNNNNNNIVNNNNNSSD-----GCT---PSPAPQVSM 162
P + + +++ +++ G T P P P SM
Sbjct: 296 MPALPHYQLPDSSYSAASLGQDVGSTVHRPQPLPPSSM 333
>gi|351711816|gb|EHB14735.1| Paired box protein Pax-7 [Heterocephalus glaber]
Length = 457
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 167 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 218
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 219 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 257
>gi|297666243|ref|XP_002811443.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pongo abelii]
Length = 505
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|399146688|gb|AFP25466.1| paired box 7 [Anas platyrhynchos]
Length = 503
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 184 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 235
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 236 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 274
>gi|119615260|gb|EAW94854.1| paired box gene 7, isoform CRA_b [Homo sapiens]
Length = 504
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 184 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 235
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 236 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 274
>gi|301782923|ref|XP_002926876.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Ailuropoda melanoleuca]
Length = 505
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
musculus]
Length = 342
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARLR----LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG ++ P ++L K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLSVGPAAGDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|51869699|emb|CAH04386.1| paired box protein 7 [Salmo salar]
Length = 506
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ S++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 188 KHSIDGILGDK-----GNRTDESSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 299
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 300 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 337
>gi|119615262|gb|EAW94856.1| paired box gene 7, isoform CRA_d [Homo sapiens]
gi|410341457|gb|JAA39675.1| paired box 7 [Pan troglodytes]
gi|410341461|gb|JAA39677.1| paired box 7 [Pan troglodytes]
Length = 503
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|207029223|ref|NP_001128726.1| paired box protein Pax-7 isoform 3 [Homo sapiens]
gi|114554356|ref|XP_001157066.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pan troglodytes]
gi|426328069|ref|XP_004024825.1| PREDICTED: paired box protein Pax-7 isoform 2 [Gorilla gorilla
gorilla]
gi|410341459|gb|JAA39676.1| paired box 7 [Pan troglodytes]
Length = 505
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|119888927|ref|XP_616352.3| PREDICTED: paired box protein Pax-7 isoform 1 [Bos taurus]
gi|297472329|ref|XP_002685784.1| PREDICTED: paired box protein Pax-7 [Bos taurus]
gi|296490095|tpg|DAA32208.1| TPA: paired box 7 [Bos taurus]
Length = 505
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|83940796|gb|ABC48797.1| PAX7 transcriptional factor isoform B [Homo sapiens]
Length = 505
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|344268964|ref|XP_003406326.1| PREDICTED: retinal homeobox protein Rx-like [Loxodonta africana]
Length = 341
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARLR----LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P + A+L K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 108 SPGLRVGPANGDAKLAEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 167
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 168 KVNLPEVRVQVWFQNRRAKWRRQEKL 193
>gi|440892608|gb|ELR45722.1| Paired box protein Pax-7 [Bos grunniens mutus]
Length = 502
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|395528443|ref|XP_003766339.1| PREDICTED: paired box protein Pax-7 [Sarcophilus harrisii]
Length = 637
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 317 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 368
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 369 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 428
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P++ ++ + + S P P P +M
Sbjct: 429 MPTIPPYQLPDSTYSSTTISQDGGSTVHRPQPLPPSTM 466
>gi|2240024|gb|AAB62324.1| retinal homeobox protein [Mus musculus]
Length = 342
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARLR----LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG ++ P ++L K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 112 SPGLSVGPAAGDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 171
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 172 KVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|354506189|ref|XP_003515147.1| PREDICTED: intestine-specific homeobox-like [Cricetulus griseus]
gi|344257933|gb|EGW14037.1| Intestine-specific homeobox [Cricetulus griseus]
Length = 241
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 35 DNSNPGSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+ PGS LE P DQ + KR +R RT+FT +Q+ LEK F THYPD+ R +LA+
Sbjct: 56 QTATPGSKLERPSQDQLQEE-KRSKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRTQLAS 114
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCT 153
+I LPEAR+Q+WF N+RAKWR++EK+ GS +Q P + + +N + + T
Sbjct: 115 RINLPEARVQIWFQNQRAKWRKQEKI------GSLGASQQPGEASLTLPSNMDMAGPVLT 168
Query: 154 PSPAPQV 160
P+ P++
Sbjct: 169 PTALPRL 175
>gi|325980252|gb|ADZ48385.1| Pax3 [Polyodon spathula]
Length = 285
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D + +S+ GS++E E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 92 KHSIDGILGDRS-----SHSDEGSDIESEPD---LPLKRKQRRSRTTFTAEQLEELERAF 143
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 144 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 182
>gi|195401629|ref|XP_002059415.1| GJ17468 [Drosophila virilis]
gi|194142421|gb|EDW58827.1| GJ17468 [Drosophila virilis]
Length = 881
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +D+ K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 522 GEKITSGSDDEGQDENCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 578
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+QVWF NRRAKWRR+EK + R G TQ P+
Sbjct: 579 KVNLPEVRVQVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 619
>gi|602343|emb|CAA84513.1| PAX7 paired box containing transcription factor [Homo sapiens]
Length = 467
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|331271832|gb|AED02521.1| paired box 7 protein [Coturnix japonica]
Length = 248
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 56 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 107
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 108 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 167
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P++ + + S P P P +M
Sbjct: 168 MPTLPPYQLPDSTYPTTTISQDGGSTVHRPQPLPPSTM 205
>gi|431906259|gb|ELK10456.1| Paired box protein Pax-7 [Pteropus alecto]
Length = 342
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 20 ELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFER 79
EL GS G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK FER
Sbjct: 19 ELPRCGSPGELRGPGNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFER 75
Query: 80 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
THYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 76 THYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 112
>gi|344283453|ref|XP_003413486.1| PREDICTED: paired box protein Pax-7-like [Loxodonta africana]
Length = 505
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|34328055|ref|NP_035169.1| paired box protein Pax-7 [Mus musculus]
gi|52788256|sp|P47239.2|PAX7_MOUSE RecName: Full=Paired box protein Pax-7
gi|20522260|gb|AAG16663.3|AF254422_1 paired box transcription factor PAX7 [Mus musculus]
gi|162318458|gb|AAI56073.1| Paired box gene 7 [synthetic construct]
gi|162319578|gb|AAI56885.1| Paired box gene 7 [synthetic construct]
Length = 503
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|300795246|ref|NP_001178913.1| paired box protein Pax-7 [Rattus norvegicus]
Length = 503
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|348528067|ref|XP_003451540.1| PREDICTED: retinal homeobox protein Rx3-like [Oreochromis
niloticus]
Length = 305
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 27 DETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVF 86
E+C T +P + + DD++ K+K +RNRT+FT Q+ LE+ FE++HYPDV+
Sbjct: 83 SESCDTSVCPDSPDRDGKLSDDESH---KKKHRRNRTTFTTFQLHELERAFEKSHYPDVY 139
Query: 87 ARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
+RE LA K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 140 SREELALKVNLPEVRVQVWFQNRRAKWRRQEKL 172
>gi|148681370|gb|EDL13317.1| paired box gene 7 [Mus musculus]
Length = 498
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 178 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 229
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 230 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 268
>gi|385251413|ref|NP_001245265.1| paired box gene 7b [Oncorhynchus mykiss]
gi|381216192|gb|AFF61356.1| paired box protein 7 beta variant 6 [Oncorhynchus mykiss]
Length = 497
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 196 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 252
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT--------QAPNNNNNNIVNNNN 146
AR+QVWFSNRRA+WR++ N G PT Q P ++ + +
Sbjct: 253 ARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQD 312
Query: 147 NSSDGCTPSPAPQVSM 162
SS P P P SM
Sbjct: 313 GSSTLHRPQPLPPSSM 328
>gi|381216190|gb|AFF61355.1| paired box protein 7 beta variant 5 [Oncorhynchus mykiss]
Length = 501
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 200 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 256
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT--------QAPNNNNNNIVNNNN 146
AR+QVWFSNRRA+WR++ N G PT Q P ++ + +
Sbjct: 257 ARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQD 316
Query: 147 NSSDGCTPSPAPQVSM 162
SS P P P SM
Sbjct: 317 GSSTLHRPQPLPPSSM 332
>gi|301778625|ref|XP_002924730.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Ailuropoda melanoleuca]
Length = 278
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 4/85 (4%)
Query: 39 PGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAK 94
PG + P A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K
Sbjct: 113 PGLPVGPATGDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGK 172
Query: 95 IGLPEARIQVWFSNRRAKWRREEKL 119
+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 173 VNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|149024435|gb|EDL80932.1| similar to paired box gene 7 isoform 1 (predicted) [Rattus
norvegicus]
Length = 492
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 172 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 223
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 224 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 262
>gi|53126008|emb|CAG25717.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 201 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 257
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT--------QAPNNNNNNIVNNNN 146
AR+QVWFSNRRA+WR++ N G PT Q P ++ + +
Sbjct: 258 ARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQD 317
Query: 147 NSSDGCTPSPAPQVSM 162
SS P P P SM
Sbjct: 318 GSSTLHRPQPLPPSSM 333
>gi|351698176|gb|EHB01095.1| Paired box protein Pax-3 [Heterocephalus glaber]
Length = 670
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 89/168 (52%), Gaps = 24/168 (14%)
Query: 3 YLEKPLETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNR 62
+L+ PL T+ T L G GS S+ GS+++ E D L LKRK +R+R
Sbjct: 256 HLDPPLATR---ITTGQALRGAGS-------APQSDEGSDIDSEPD---LPLKRKQRRSR 302
Query: 63 TSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-- 120
T+FT +Q++ LE+ FERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 303 TTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQL 362
Query: 121 ---NQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPT 165
N G PT P + + P+ PQ DP+
Sbjct: 363 MAFNHLLPGGFPPTAMPTLPTYQLSETSYQ------PTSIPQAVSDPS 404
>gi|385251415|ref|NP_001245266.1| paired box 7 [Oncorhynchus mykiss]
gi|381216180|gb|AFF61350.1| paired box protein 7 alpha variant 4 [Oncorhynchus mykiss]
Length = 502
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 201 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 257
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT--------QAPNNNNNNIVNNNN 146
AR+QVWFSNRRA+WR++ N G PT Q P ++ + +
Sbjct: 258 ARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQD 317
Query: 147 NSSDGCTPSPAPQVSM 162
SS P P P SM
Sbjct: 318 GSSTLHRPQPLPPSSM 333
>gi|168479562|dbj|BAG11537.1| paired-box protein 3/7 [Eptatretus burgeri]
Length = 451
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 7/99 (7%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ ++ +T+ D+S+ D + L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 127 KHSIDGILGEKAGSTVDDSSD-------IDSEPDLPLKRKQRRSRTTFTAEQLEELEKAF 179
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 180 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 218
>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
Length = 282
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%)
Query: 29 TCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFAR 88
+C + G S+ DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++R
Sbjct: 62 SCNSTGGGSDEELGAGCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 121
Query: 89 ERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR 123
E LA K+ LPE R+QVWF NRRAKWRR+EK+ R
Sbjct: 122 EELAMKVNLPEVRVQVWFQNRRAKWRRQEKMEAAR 156
>gi|355755063|gb|EHH58930.1| Retina and anterior neural fold homeobox protein, partial [Macaca
fascicularis]
Length = 117
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG + P +A+L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 15 SPGLPVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 74
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 75 KVNLPEVRVQVWFQNRRAKWRRQEKL 100
>gi|327267059|ref|XP_003218320.1| PREDICTED: paired box protein Pax-3-like isoform 4 [Anolis
carolinensis]
Length = 461
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 16/154 (10%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ T S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 161 KHSIDGILSERGPVT--PQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 215
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 216 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 275
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + ++ P+ PQ DP+
Sbjct: 276 MPTLPTYQLSESSYQ------PTSIPQAVSDPSS 303
>gi|344030214|ref|NP_001230653.1| retinal homeobox protein Rx2 [Gallus gallus]
gi|23451258|gb|AAN32718.1|AF420600_1 homeobox transcription factor RAX1 [Gallus gallus]
Length = 317
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
G + +P D++ + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE
Sbjct: 107 GGDGKPSDEE---QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPE 163
Query: 100 ARIQVWFSNRRAKWRREEKL 119
R+QVWF NRRAKWRR+EKL
Sbjct: 164 VRVQVWFQNRRAKWRRQEKL 183
>gi|41615361|gb|AAS09957.1| Pax7 transcription factor, partial [Ambystoma mexicanum]
Length = 375
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 88/154 (57%), Gaps = 20/154 (12%)
Query: 21 LDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERT 80
+DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK FERT
Sbjct: 189 IDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERT 240
Query: 81 HYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPTQAPN 135
HYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT P+
Sbjct: 241 HYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPS 300
Query: 136 NNNNNIVNNNNNSS---DGCT----PSPAPQVSM 162
+ + S+ DG + P P P SM
Sbjct: 301 LPPYQLPGSGYASALAQDGGSTVHRPQPLPPSSM 334
>gi|53125887|emb|CAG25525.1| paired box protein 7 [Salvelinus alpinus]
Length = 497
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 196 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 252
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT--------QAPNNNNNNIVNNNN 146
AR+QVWFSNRRA+WR++ N G PT Q P ++ + +
Sbjct: 253 ARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQD 312
Query: 147 NSSDGCTPSPAPQVSM 162
SS P P P SM
Sbjct: 313 GSSTLHRPQPLPPSSM 328
>gi|18203379|sp|Q9PVX0.1|RX2_CHICK RecName: Full=Retinal homeobox protein Rx2; Short=cRax2
gi|6002395|dbj|BAA84749.1| homeobox protein cRax/Rax2/Rx2 [Gallus gallus]
Length = 317
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
G + +P D++ + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE
Sbjct: 107 GGDGKPSDEE---QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPE 163
Query: 100 ARIQVWFSNRRAKWRREEKL 119
R+QVWF NRRAKWRR+EKL
Sbjct: 164 VRVQVWFQNRRAKWRRQEKL 183
>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
Length = 282
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%)
Query: 29 TCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFAR 88
+C + G S+ DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++R
Sbjct: 62 SCNSTGGGSDEELGAGCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 121
Query: 89 ERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQR 123
E LA K+ LPE R+QVWF NRRAKWRR+EK+ R
Sbjct: 122 EELAMKVNLPEVRVQVWFQNRRAKWRRQEKMEAAR 156
>gi|53125901|emb|CAG25526.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 201 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 257
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT--------QAPNNNNNNIVNNNN 146
AR+QVWFSNRRA+WR++ N G PT Q P ++ + +
Sbjct: 258 ARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQD 317
Query: 147 NSSDGCTPSPAPQVSM 162
SS P P P SM
Sbjct: 318 GSSTLHRPQPLPPSSM 333
>gi|313212674|emb|CBY36614.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV+ARE LA KI LPE R+QVWF NRRAKWR
Sbjct: 50 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYAREELATKISLPEVRVQVWFQNRRAKWR 109
Query: 115 REEKL 119
R+EK+
Sbjct: 110 RQEKV 114
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 88 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 147
Query: 115 REEKLRNQR 123
R+EK+ R
Sbjct: 148 RQEKMEAAR 156
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 88 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 147
Query: 115 REEKLRNQR 123
R+EK+ R
Sbjct: 148 RQEKMEAAR 156
>gi|148677730|gb|EDL09677.1| retina and anterior neural fold homeobox, isoform CRA_b [Mus
musculus]
Length = 379
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARLR----LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG ++ P ++L K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 149 SPGLSVGPAAGDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 208
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 209 KVNLPEVRVQVWFQNRRAKWRRQEKL 234
>gi|41282110|ref|NP_571300.2| retinal homeobox protein Rx1 [Danio rerio]
gi|38173897|gb|AAH60890.1| Retinal homeobox gene 1 [Danio rerio]
Length = 330
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 11/95 (11%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 193
Query: 115 REEKLRNQRQ-----------RGSADPTQAPNNNN 138
R+EK+ R S PT P NN+
Sbjct: 194 RQEKIDASTMKLHDSPMLSFNRPSMHPTVGPMNNS 228
>gi|2394304|gb|AAB70267.1| retinal homeobox 1 [Xenopus laevis]
Length = 322
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Query: 20 ELDGLGSDETCTTIGDNSNPGSNLEPEDDQA---RLRLKRKLQRNRTSFTNDQIDNLEKE 76
+ DG G + T + +PG + D++ + K+K +RNRT+FT Q+ LE+
Sbjct: 89 QADGYGDPYSGKTSSECLSPGLSTSNSDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERA 148
Query: 77 FERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 149 FEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKL 191
>gi|327267057|ref|XP_003218319.1| PREDICTED: paired box protein Pax-3-like isoform 3 [Anolis
carolinensis]
Length = 485
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 16/154 (10%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ T S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERGPVT--PQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 240 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 299
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + ++ P+ PQ DP+
Sbjct: 300 MPTLPTYQLSESSYQ------PTSIPQAVSDPSS 327
>gi|339241875|ref|XP_003376863.1| paired box protein Pax-6 [Trichinella spiralis]
gi|316974400|gb|EFV57892.1| paired box protein Pax-6 [Trichinella spiralis]
Length = 419
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 49/51 (96%)
Query: 74 EKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
+KEFERTHYPDVFARERLA +I LPEARIQVWFSNRRAKWRREEKLRNQ++
Sbjct: 238 KKEFERTHYPDVFARERLAGRINLPEARIQVWFSNRRAKWRREEKLRNQKR 288
>gi|410919965|ref|XP_003973454.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
Length = 447
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ C I D GS+++ E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-CNRIDD----GSDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|51979090|gb|AAU20320.1| retinal homeobox [Platynereis dumerilii]
Length = 304
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA KI LPE R+QVWF NRRAKWR
Sbjct: 112 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKINLPEVRVQVWFQNRRAKWR 171
Query: 115 REEKL 119
R+EKL
Sbjct: 172 RQEKL 176
>gi|2136302|pir||A45452 transcription factor PAX3 - human (fragments)
Length = 326
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 87/165 (52%), Gaps = 22/165 (13%)
Query: 7 PLETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFT 66
PLE K K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT
Sbjct: 26 PLEKK-----AKHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFT 74
Query: 67 NDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----N 121
+Q++ LE+ FERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N
Sbjct: 75 AEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFN 134
Query: 122 QRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
G PT P + + P+ PQ DP+
Sbjct: 135 HLIPGGFPPTAMPTLPTYQLSETSYQ------PTSIPQAVSDPSS 173
>gi|381216176|gb|AFF61348.1| paired box protein 7 alpha variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 196 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 247
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 248 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 307
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 308 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 345
>gi|185133665|ref|NP_001117167.1| paired box protein 7 [Salmo salar]
gi|51869693|emb|CAH04383.1| paired box protein 7 [Salmo salar]
Length = 520
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 201 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 252
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 253 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 312
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 313 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 350
>gi|348522046|ref|XP_003448537.1| PREDICTED: retinal homeobox protein Rx2-like [Oreochromis
niloticus]
Length = 326
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%)
Query: 45 PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQV 104
PE + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV
Sbjct: 122 PETTKDEEHAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 181
Query: 105 WFSNRRAKWRREEKL 119
WF NRRAKWRR+EK+
Sbjct: 182 WFQNRRAKWRRQEKM 196
>gi|326674430|ref|XP_001919624.3| PREDICTED: paired box protein Pax-3 [Danio rerio]
Length = 653
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%), Gaps = 6/95 (6%)
Query: 25 GSDETCTTIGDNSNP---GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTH 81
G+ + D S+P GS +E E D L LKRK +R+RT+FT DQ++ LE+ FERTH
Sbjct: 192 GAHSIEGILADRSSPSDEGSEVESEPD---LPLKRKQRRSRTTFTADQLEELERAFERTH 248
Query: 82 YPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
YPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 249 YPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 283
>gi|17380298|sp|O42356.2|RX1_DANRE RecName: Full=Retinal homeobox protein Rx1
gi|9903605|gb|AAB62325.2| retinal homeobox protein [Danio rerio]
Length = 330
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 11/95 (11%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 193
Query: 115 REEKLRNQRQ-----------RGSADPTQAPNNNN 138
R+EK+ R S PT P NN+
Sbjct: 194 RQEKIDASTMKLHDSPMLSFNRPSMHPTVGPMNNS 228
>gi|91086979|ref|XP_973468.1| PREDICTED: similar to Retinal homeobox protein Rx (DRx1) (DRx)
[Tribolium castaneum]
gi|270011078|gb|EFA07526.1| retinal homeobox [Tribolium castaneum]
Length = 278
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 107 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 166
Query: 115 REEKLRNQR 123
R+EK+ R
Sbjct: 167 RQEKMEAAR 175
>gi|410923991|ref|XP_003975465.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx2-like
[Takifugu rubripes]
Length = 358
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 56/71 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 165 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 224
Query: 115 REEKLRNQRQR 125
R+EK+ N +
Sbjct: 225 RQEKMDNTSMK 235
>gi|301614476|ref|XP_002936715.1| PREDICTED: retinal homeobox protein Rx-B [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 128 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 187
Query: 115 REEKL 119
R+EKL
Sbjct: 188 RQEKL 192
>gi|337216969|gb|AEI60176.1| Pax7-forkhead fusion protein [Homo sapiens]
Length = 405
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 1 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 57
Query: 100 ARIQVWFSNRRAKWRRE 116
AR+QVWFSNRRA+WR++
Sbjct: 58 ARVQVWFSNRRARWRKQ 74
>gi|312076583|ref|XP_003140926.1| hypothetical protein LOAG_05341 [Loa loa]
Length = 553
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Query: 33 IGDNSNPGS-NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
+G N P S + PED KRK +R RT+F+ Q+D LEK F RTHYPDVF RE L
Sbjct: 189 LGINDRPSSCSNSPEDSG-----KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREEL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
A ++ L EAR+QVWF NRRAKWR++E+ G P P ++
Sbjct: 244 AQRVILTEARVQVWFQNRRAKWRKQERTSTVHPYGHTTPHHVPRTSH 290
>gi|326932470|ref|XP_003212340.1| PREDICTED: paired box protein Pax-7, partial [Meleagris gallopavo]
Length = 330
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 6 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 62
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT--------QAPNNNNNNIVNNNN 146
AR+QVWFSNRRA+WR++ N G PT Q P++ + +
Sbjct: 63 ARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTLPPYQLPDSTYPTTTISQD 122
Query: 147 NSSDGCTPSPAPQVSM 162
SS P P P +M
Sbjct: 123 GSSTVHRPQPLPPSTM 138
>gi|126343736|ref|XP_001379904.1| PREDICTED: paired box protein Pax-7-like, partial [Monodelphis
domestica]
Length = 309
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 6 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 62
Query: 100 ARIQVWFSNRRAKWRRE 116
AR+QVWFSNRRA+WR++
Sbjct: 63 ARVQVWFSNRRARWRKQ 79
>gi|16758430|ref|NP_446130.1| retinal homeobox protein Rx [Rattus norvegicus]
gi|18203127|sp|Q9JLT7.1|RX_RAT RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein RX [Rattus norvegicus]
gi|12746272|gb|AAK07423.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
gi|149064497|gb|EDM14700.1| retina and anterior neural fold homeobox, isoform CRA_b [Rattus
norvegicus]
Length = 342
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 193
Query: 115 REEKL 119
R+EKL
Sbjct: 194 RQEKL 198
>gi|149064496|gb|EDM14699.1| retina and anterior neural fold homeobox, isoform CRA_a [Rattus
norvegicus]
Length = 344
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 136 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 195
Query: 115 REEKL 119
R+EKL
Sbjct: 196 RQEKL 200
>gi|307192281|gb|EFN75568.1| Retinal homeobox protein Rx3 [Harpegnathos saltator]
Length = 282
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 88 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 147
Query: 115 REEKLRNQR 123
R+EK+ R
Sbjct: 148 RQEKMEAAR 156
>gi|2240022|gb|AAB62323.1| retinal homeobox 2A [Xenopus laevis]
Length = 325
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Query: 30 CTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARE 89
C + G +++ N +D+Q + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE
Sbjct: 105 CLSPGLSTSNSDNKLSDDEQ---QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 161
Query: 90 RLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
LA K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 162 ELAMKVNLPEVRVQVWFQNRRAKWRRQEKL 191
>gi|157278545|ref|NP_001098373.1| retinal homeobox protein Rx2 [Oryzias latipes]
gi|17380303|sp|Q9I9A2.1|RX2_ORYLA RecName: Full=Retinal homeobox protein Rx2
gi|7635917|emb|CAB88703.1| Rx2 transcription factor [Oryzias latipes]
Length = 327
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNRRAKWR 193
Query: 115 REEKL 119
R+EK+
Sbjct: 194 RQEKM 198
>gi|148230627|ref|NP_001081689.1| retinal homeobox protein Rx-B [Xenopus laevis]
gi|292495034|sp|O42567.2|RXB_XENLA RecName: Full=Retinal homeobox protein Rx-B; AltName: Full=Retina
and anterior neural fold homeobox protein B; AltName:
Full=Rx2A; Short=Xrx2
gi|114107824|gb|AAI23154.1| Rx2A protein [Xenopus laevis]
Length = 325
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Query: 30 CTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARE 89
C + G +++ N +D+Q + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE
Sbjct: 105 CLSPGLSTSNSDNKLSDDEQ---QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 161
Query: 90 RLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
LA K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 162 ELAMKVNLPEVRVQVWFQNRRAKWRRQEKL 191
>gi|221119371|ref|XP_002160816.1| PREDICTED: homeobox protein aristaless-like isoform 1 [Hydra
magnipapillata]
Length = 239
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT Q+D LE+ F++THYPDVF RE LA ++ L EAR+QVWF NRRAKWR
Sbjct: 47 KRKQRRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQVWFQNRRAKWR 106
Query: 115 REEKLR---NQRQRGSADPTQAPNN 136
+ EKL +Q+Q GS +P +
Sbjct: 107 KREKLSYNVHQQQHGSNGEVSSPYH 131
>gi|19168460|dbj|BAB85815.1| aristaless protein [Gryllus bimaculatus]
Length = 391
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 97 KRKQRRYRTTFTSFQLEELEKAFTRTHYPDVFTREELAIKIGLTEARIQVWFQNRRAKWR 156
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 157 KQEKVGPQ 164
>gi|345304995|ref|XP_001507033.2| PREDICTED: paired box protein Pax-3 [Ornithorhynchus anatinus]
Length = 483
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 298 MPTLPTYQLTETSYQ------PTSIPQAVSDPSS 325
>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
Length = 350
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+DDQ K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVW
Sbjct: 135 KDDQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVW 190
Query: 106 FSNRRAKWRREEKL 119
F NRRAKWRR+EK+
Sbjct: 191 FQNRRAKWRRQEKM 204
>gi|395528168|ref|XP_003766203.1| PREDICTED: paired box protein Pax-3 [Sarcophilus harrisii]
Length = 525
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 298 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 325
>gi|41581183|emb|CAF02091.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 196 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 247
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 248 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 307
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 308 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 345
>gi|381216182|gb|AFF61351.1| paired box protein 7 beta variant 1 [Oncorhynchus mykiss]
Length = 518
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 200 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 251
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 252 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 311
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 312 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 349
>gi|260178655|gb|ACX34050.1| paired box transcription factor 7 isoform 1 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 502
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ C D GS+++ E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-CNRTDD----GSDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 294
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 295 MPTLPTYQLPESSYPSTTLSQEGSSTLHRPQPLPPSSM 332
>gi|157122935|ref|XP_001659964.1| retinal homeobox protein [Aedes aegypti]
gi|108882964|gb|EAT47189.1| AAEL001689-PA [Aedes aegypti]
Length = 756
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 394 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 453
Query: 115 REEKLRNQR 123
R+EK + R
Sbjct: 454 RQEKSESLR 462
>gi|18858285|ref|NP_571459.1| aristaless-related homeobox protein [Danio rerio]
gi|18202032|sp|O42115.1|ARX_DANRE RecName: Full=Aristaless-related homeobox protein; Short=ARX
gi|2317261|dbj|BAA21764.1| Arx homeoprotein [Danio rerio]
gi|190337749|gb|AAI63865.1| Aristaless related homeobox [Danio rerio]
gi|190337753|gb|AAI63872.1| Aristaless related homeobox [Danio rerio]
Length = 453
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 17/110 (15%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 194 GEDSVCLSAGSDSEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 241
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q A PT P
Sbjct: 242 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQ-----AHPTGLP 286
>gi|381216186|gb|AFF61353.1| paired box protein 7 beta variant 3 [Oncorhynchus mykiss]
Length = 514
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 196 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 247
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 248 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 307
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 308 MPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSM 345
>gi|12746271|gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
Length = 333
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 125 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 184
Query: 115 REEKL 119
R+EKL
Sbjct: 185 RQEKL 189
>gi|148237828|ref|NP_001081687.1| retinal homeobox protein Rx-A [Xenopus laevis]
gi|292495033|sp|O42201.2|RXA_XENLA RecName: Full=Retinal homeobox protein Rx-A; Short=Rx1A;
Short=Xrx1; AltName: Full=Retina and anterior neural
fold homeobox protein A
gi|2232059|gb|AAB62322.1| retinal homeobox 1A [Xenopus laevis]
gi|213625316|gb|AAI70331.1| Retinal homeobox 1A [Xenopus laevis]
gi|213626887|gb|AAI70333.1| Retinal homeobox 1A [Xenopus laevis]
Length = 322
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 9/104 (8%)
Query: 22 DGLG------SDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
DG G + C + G +++ N +D+Q + K+K +RNRT+FT Q+ LE+
Sbjct: 91 DGYGDPYLGKTSSECLSPGLSTSNSDNKLSDDEQ---QPKKKHRRNRTTFTTYQLHELER 147
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 148 AFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKL 191
>gi|260178657|gb|ACX34051.1| paired box transcription factor 7 isoform 2 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 505
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ C D GS+++ E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 186 KHSIDGILGDK-CNRTDD----GSDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 297
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 298 MPTLPTYQLPESSYPSTTLSQEGSSTLHRPQPLPPSSM 335
>gi|327267055|ref|XP_003218318.1| PREDICTED: paired box protein Pax-3-like isoform 2 [Anolis
carolinensis]
Length = 461
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 86/154 (55%), Gaps = 16/154 (10%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ + S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 161 KHSIDGILSERAPS--APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 215
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 216 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 275
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + ++ P+ PQ DP+
Sbjct: 276 MPTLPTYQLSESSYQ------PTSIPQAVSDPSS 303
>gi|393909901|gb|EFO23144.2| hypothetical protein LOAG_05341 [Loa loa]
Length = 577
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Query: 33 IGDNSNPGS-NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
+G N P S + PED KRK +R RT+F+ Q+D LEK F RTHYPDVF RE L
Sbjct: 189 LGINDRPSSCSNSPEDSG-----KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREEL 243
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
A ++ L EAR+QVWF NRRAKWR++E+ G P P ++
Sbjct: 244 AQRVILTEARVQVWFQNRRAKWRKQERTSTVHPYGHTTPHHVPRTSH 290
>gi|311245261|ref|XP_003121760.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Sus scrofa]
Length = 348
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 193
Query: 115 REEKL 119
R+EKL
Sbjct: 194 RQEKL 198
>gi|313234331|emb|CBY10398.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV+ARE LA KI LPE R+QVWF NRRAKWR
Sbjct: 129 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYAREELATKISLPEVRVQVWFQNRRAKWR 188
Query: 115 REEKL 119
R+EK+
Sbjct: 189 RQEKV 193
>gi|51869703|emb|CAH04388.1| paired box protein 7 [Salmo salar]
Length = 516
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 16/142 (11%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA
Sbjct: 209 GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 265
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNNN 140
+ L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 266 RTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPG 325
Query: 141 IVNNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 326 TTLSQDGSSTLHRPQPLPPSSM 347
>gi|53126022|emb|CAG25718.1| paired box protein 7 [Salvelinus alpinus]
Length = 501
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 77/136 (56%), Gaps = 16/136 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 200 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 256
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT--------QAPNNNNNNIVNNNN 146
AR+QVWFSNRRA+WR++ N G PT Q P + + +
Sbjct: 257 ARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPECSYPGTTLSQD 316
Query: 147 NSSDGCTPSPAPQVSM 162
SS P P P SM
Sbjct: 317 GSSTLHRPQPLPPSSM 332
>gi|355709392|gb|AES03576.1| paired box 6 [Mustela putorius furo]
Length = 111
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 49/55 (89%)
Query: 80 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
THYPDVFARERLAAKI LPEARIQVWFSNRRAKWRREEKLRNQR++ S P+ P
Sbjct: 1 THYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP 55
>gi|319740964|gb|ADV69001.1| retinal homeobox [Patiria miniata]
Length = 314
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 212 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 271
Query: 115 REEKLRN 121
R+EK+ +
Sbjct: 272 RQEKMES 278
>gi|133778704|gb|AAI33878.1| Arx protein [Danio rerio]
Length = 382
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 17/110 (15%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 194 GEDSVCLSAGSDSEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 241
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q A PT P
Sbjct: 242 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQ-----AHPTGLP 286
>gi|429836904|dbj|BAM72542.1| paired box 3, partial [Pipistrellus abramus]
Length = 403
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 124 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 177
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 178 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 237
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 238 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 265
>gi|47225662|emb|CAG08005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+DDQ K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVW
Sbjct: 1 KDDQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVW 56
Query: 106 FSNRRAKWRREEKL 119
F NRRAKWRR+EK+
Sbjct: 57 FQNRRAKWRRQEKM 70
>gi|255689730|gb|ACU30148.1| paired box 3 [Monodelphis domestica]
Length = 319
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 84/153 (54%), Gaps = 17/153 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 155 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 208
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 209 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGASQLMASNHLIPGGFPPTA 268
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPT 165
P + S P+ PQ DP+
Sbjct: 269 MPTLPTYQL------SETSYQPTSIPQAVSDPS 295
>gi|72044362|ref|XP_782307.1| PREDICTED: uncharacterized protein LOC576952 [Strongylocentrotus
purpuratus]
Length = 528
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 264 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 323
Query: 115 REEKL 119
R+EK+
Sbjct: 324 RQEKM 328
>gi|119591196|gb|EAW70790.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_b [Homo
sapiens]
Length = 330
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 36 KHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 89
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 90 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 149
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 150 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 177
>gi|426221627|ref|XP_004005010.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Ovis
aries]
Length = 489
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 190 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 243
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 244 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 303
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 304 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 331
>gi|196010814|ref|XP_002115271.1| hypothetical protein TRIADDRAFT_29410 [Trichoplax adhaerens]
gi|190582042|gb|EDV22116.1| hypothetical protein TRIADDRAFT_29410 [Trichoplax adhaerens]
Length = 400
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 72/104 (69%), Gaps = 10/104 (9%)
Query: 47 DDQAR-LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
D QA L+L+ KL+RNRT FT++QI LE F+ T YPDV+ RE LA+KIGL EAR+QVW
Sbjct: 220 DHQAADLKLQ-KLRRNRTMFTDEQIKKLEDIFKSTQYPDVYTREELASKIGLSEARVQVW 278
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSS 149
FSNRRAKWR+E K R+ P++ N+ + + N+ + +S
Sbjct: 279 FSNRRAKWRKEGKHRS--------PSKLSNDGSTTLFNSKSTNS 314
>gi|297275793|ref|XP_002801073.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Macaca mulatta]
gi|402903739|ref|XP_003914716.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Papio anubis]
Length = 230
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
G +L P ++ K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE
Sbjct: 59 GGSLGPGEEAP----KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPE 114
Query: 100 ARIQVWFSNRRAKWRREEKLRN 121
R+QVWF NRRAKWRR+E+L +
Sbjct: 115 VRVQVWFQNRRAKWRRQERLES 136
>gi|53592|emb|CAA42008.1| DNA binding protein [Mus musculus]
Length = 479
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + ++ P+ PQ DP+
Sbjct: 299 MPTLPTYQLSEHSYQ------PTSIPQAVSDPSS 326
>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
Length = 344
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 140 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 199
Query: 115 REEKL 119
R+EK+
Sbjct: 200 RQEKM 204
>gi|47551253|ref|NP_999809.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
gi|30841695|gb|AAP34698.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
Length = 430
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 9/106 (8%)
Query: 22 DGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTH 81
+G GSD+ + +GD +DD+ KRK +RNRT+FT+ Q++ +EK F+RTH
Sbjct: 90 NGKGSDDVKSPMGDPK--------DDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTH 141
Query: 82 YPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRN-QRQRG 126
YPDV+ RE+LA + L EAR+QVWF NRRAKWR+ E+ + Q RG
Sbjct: 142 YPDVYCREQLALRCDLTEARVQVWFQNRRAKWRKRERFQQFQNMRG 187
>gi|395511533|ref|XP_003760013.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Sarcophilus harrisii]
Length = 319
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAVKVNLPEVRVQVWFQNRRAKWR 192
Query: 115 REEKL 119
R+EKL
Sbjct: 193 RQEKL 197
>gi|440912894|gb|ELR62418.1| Paired box protein Pax-3, partial [Bos grunniens mutus]
Length = 488
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 189 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 242
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 243 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 302
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 303 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 330
>gi|332205885|ref|NP_001193747.1| paired box protein Pax-3 [Bos taurus]
gi|296490253|tpg|DAA32366.1| TPA: paired box 3 [Bos taurus]
Length = 484
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 326
>gi|157278547|ref|NP_001098374.1| Rx3 protein [Oryzias latipes]
gi|15667414|emb|CAC69975.1| Rx3 protein [Oryzias latipes]
Length = 292
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 100 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 159
Query: 115 REEKL 119
R+EKL
Sbjct: 160 RQEKL 164
>gi|56694806|gb|AAW23065.1| Rx, partial [Oikopleura dioica]
Length = 156
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV+ARE LA KI LPE R+QVWF NRRAKWR
Sbjct: 45 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYAREELATKISLPEVRVQVWFQNRRAKWR 104
Query: 115 REEKL 119
R+EK+
Sbjct: 105 RQEKV 109
>gi|410903484|ref|XP_003965223.1| PREDICTED: retinal homeobox protein Rx3-like [Takifugu rubripes]
Length = 301
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 106 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 165
Query: 115 REEKL 119
R+EKL
Sbjct: 166 RQEKL 170
>gi|195154829|ref|XP_002018315.1| GL17644 [Drosophila persimilis]
gi|194114111|gb|EDW36154.1| GL17644 [Drosophila persimilis]
Length = 432
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 22 DGLGSDETCTTI--GDNSNPGSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
G G+ + I G ++ GS E EDD + ++LKRK +R+RT+F+NDQID LE+ F
Sbjct: 146 SGSGASHSIDGILGGGAASAGSEDESEDDTEPSVQLKRKQRRSRTTFSNDQIDALERIFA 205
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
RT YPDV+ RE LA GL EAR+QVWFSNRRA+ R++
Sbjct: 206 RTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQ 243
>gi|444512202|gb|ELV10061.1| Paired box protein Pax-3 [Tupaia chinensis]
Length = 458
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 17/153 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 159 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 212
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 213 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 272
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPT 165
P + + P+ PQ DP+
Sbjct: 273 MPTLPTYQLSETSYQ------PTSIPQAVSDPS 299
>gi|281345944|gb|EFB21528.1| hypothetical protein PANDA_014672 [Ailuropoda melanoleuca]
Length = 481
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 326
>gi|221119369|ref|XP_002160848.1| PREDICTED: homeobox protein aristaless-like isoform 2 [Hydra
magnipapillata]
Length = 210
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT Q+D LE+ F++THYPDVF RE LA ++ L EAR+QVWF NRRAKWR
Sbjct: 18 KRKQRRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQVWFQNRRAKWR 77
Query: 115 REEKLR---NQRQRGSADPTQAPNN 136
+ EKL +Q+Q GS +P +
Sbjct: 78 KREKLSYNVHQQQHGSNGEVSSPYH 102
>gi|327267053|ref|XP_003218317.1| PREDICTED: paired box protein Pax-3-like isoform 1 [Anolis
carolinensis]
Length = 484
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + ++ P+ PQ DP+
Sbjct: 299 MPTLPTYQLSESSYQ------PTSIPQAVSDPSS 326
>gi|338725617|ref|XP_001495022.3| PREDICTED: paired box protein Pax-3 isoform 1 [Equus caballus]
Length = 483
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 298 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 325
>gi|125809511|ref|XP_001361149.1| GA17419 [Drosophila pseudoobscura pseudoobscura]
gi|54636323|gb|EAL25726.1| GA17419 [Drosophila pseudoobscura pseudoobscura]
Length = 432
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 22 DGLGSDETCTTI--GDNSNPGSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
G G+ + I G ++ GS E EDD + ++LKRK +R+RT+F+NDQID LE+ F
Sbjct: 146 SGSGASHSIDGILGGGAASAGSEDESEDDTEPSVQLKRKQRRSRTTFSNDQIDALERIFA 205
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
RT YPDV+ RE LA GL EAR+QVWFSNRRA+ R++
Sbjct: 206 RTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQ 243
>gi|344030242|ref|NP_001230663.1| retinal homeobox protein Rx [Taeniopygia guttata]
Length = 316
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 118 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAIKVNLPEVRVQVWFQNRRAKWR 177
Query: 115 REEKL 119
R+EKL
Sbjct: 178 RQEKL 182
>gi|348544801|ref|XP_003459869.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 526
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 85/156 (54%), Gaps = 19/156 (12%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G + S++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 202 KHSIDGILGDK-----GSRMDESSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 253
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G P
Sbjct: 254 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPAG 313
Query: 133 APNNNNNNIVNNN--NNSSDGCT----PSPAPQVSM 162
P + +N N+ DG P P P +M
Sbjct: 314 MPTLPTYQLPESNYPTNTQDGGATVHRPQPLPPSTM 349
>gi|345797572|ref|XP_545664.3| PREDICTED: paired box protein Pax-3 [Canis lupus familiaris]
Length = 482
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 183 KHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 237 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 296
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 297 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 324
>gi|338725615|ref|XP_003365174.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 479
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 326
>gi|449281838|gb|EMC88811.1| Retinal homeobox protein Rx2, partial [Columba livia]
Length = 233
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 7/86 (8%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ + P + E++Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 21 GEGTPPAAT---EEEQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 73
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 74 KVNLPEVRVQVWFQNRRAKWRRQEKL 99
>gi|301779609|ref|XP_002925222.1| PREDICTED: paired box protein Pax-3-like [Ailuropoda melanoleuca]
Length = 483
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 298 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 325
>gi|31563342|ref|NP_852123.1| paired box protein Pax-3 isoform PAX3d [Homo sapiens]
gi|297264992|ref|XP_001107687.2| PREDICTED: paired box protein Pax-3 isoform 8 [Macaca mulatta]
gi|332246647|ref|XP_003272464.1| PREDICTED: paired box protein Pax-3 isoform 1 [Nomascus leucogenys]
gi|410036241|ref|XP_001165390.2| PREDICTED: paired box protein Pax-3 isoform 6 [Pan troglodytes]
gi|426338712|ref|XP_004033318.1| PREDICTED: paired box protein Pax-3 isoform 1 [Gorilla gorilla
gorilla]
gi|72533682|gb|AAI01302.1| Paired box 3 [Homo sapiens]
gi|119591200|gb|EAW70794.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_f [Homo
sapiens]
gi|158255992|dbj|BAF83967.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|390464841|ref|XP_002749874.2| PREDICTED: paired box protein Pax-3 isoform 1 [Callithrix jacchus]
Length = 483
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 298 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 325
>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
Length = 334
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 139 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 198
Query: 115 REEKL 119
R+EK+
Sbjct: 199 RQEKM 203
>gi|321473819|gb|EFX84785.1| hypothetical protein DAPPUDRAFT_36325 [Daphnia pulex]
Length = 64
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 1 KRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 60
Query: 115 REEK 118
++EK
Sbjct: 61 KQEK 64
>gi|167773479|gb|ABZ92174.1| paired box 3 [synthetic construct]
Length = 835
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 276
>gi|126321609|ref|XP_001366025.1| PREDICTED: retinal homeobox protein Rx-like [Monodelphis domestica]
Length = 350
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAVKVNLPEVRVQVWFQNRRAKWR 192
Query: 115 REEKL 119
R+EKL
Sbjct: 193 RQEKL 197
>gi|391341560|ref|XP_003745097.1| PREDICTED: retinal homeobox protein Rx1-like [Metaseiulus
occidentalis]
Length = 245
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 62/83 (74%)
Query: 37 SNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIG 96
S+P +++ ED+ +K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+
Sbjct: 36 SSPRTSISEEDEDPLRAPSKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVN 95
Query: 97 LPEARIQVWFSNRRAKWRREEKL 119
LPE R+QVWF NRRAKWRR+EK+
Sbjct: 96 LPEVRVQVWFQNRRAKWRRQEKI 118
>gi|344268490|ref|XP_003406091.1| PREDICTED: paired box protein Pax-3 isoform 2 [Loxodonta africana]
Length = 483
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 298 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 325
>gi|47223097|emb|CAG07184.1| unnamed protein product [Tetraodon nigroviridis]
Length = 184
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 8 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 67
Query: 115 REEKLRN 121
R+EK+ N
Sbjct: 68 RQEKMDN 74
>gi|355565224|gb|EHH21713.1| hypothetical protein EGK_04840 [Macaca mulatta]
Length = 473
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 298 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 325
>gi|348544799|ref|XP_003459868.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 512
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 85/156 (54%), Gaps = 19/156 (12%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G + S++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 188 KHSIDGILGDK-----GSRMDESSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G P
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPAG 299
Query: 133 APNNNNNNIVNNN--NNSSDGCT----PSPAPQVSM 162
P + +N N+ DG P P P +M
Sbjct: 300 MPTLPTYQLPESNYPTNTQDGGATVHRPQPLPPSTM 335
>gi|190608780|gb|ACE79721.1| paired-box transcription factor 3/7 [Branchiostoma lanceolatum]
Length = 297
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+G+ + PG + + D + L LKRK +R+RT+FT +Q+D LEK FERTHYPD++ RE LA
Sbjct: 72 LGEKNGPGDSSD-CDSEPDLPLKRKQRRSRTTFTPEQLDELEKAFERTHYPDIYTREELA 130
Query: 93 AKIGLPEARIQVWFSNRRAKWRREE 117
+ L EAR+QVWFS+RRA+WR+++
Sbjct: 131 QRTKLTEARVQVWFSSRRARWRKQQ 155
>gi|188219638|ref|NP_001120838.1| paired box protein Pax-3 isoform PAX3i [Homo sapiens]
gi|397495768|ref|XP_003818718.1| PREDICTED: paired box protein Pax-3 isoform 1 [Pan paniscus]
gi|72533358|gb|AAI01300.1| Paired box 3 [Homo sapiens]
gi|72533360|gb|AAI01303.1| Paired box 3 [Homo sapiens]
gi|72533551|gb|AAI01301.1| Paired box 3 [Homo sapiens]
gi|89130716|gb|AAI14364.1| Paired box 3 [Homo sapiens]
Length = 483
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 298 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 325
>gi|444732546|gb|ELW72836.1| Retinal homeobox protein Rx [Tupaia chinensis]
Length = 286
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Query: 38 NPGSNLEPEDDQARL----RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
+PG P + +L + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 111 SPGLPSGPATSEVKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAG 170
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EKL
Sbjct: 171 KVNLPEVRVQVWFQNRRAKWRRQEKL 196
>gi|6636097|gb|AAF20054.1|AF178854_1 Pax3-forkhead fusion protein [synthetic construct]
gi|431254|gb|AAC50053.1| PAX3 protein-forkhead transcription factor fusion [Homo sapiens]
Length = 836
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 277
>gi|403266765|ref|XP_003925533.1| PREDICTED: paired box protein Pax-3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 483
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 298 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 325
>gi|344268488|ref|XP_003406090.1| PREDICTED: paired box protein Pax-3 isoform 1 [Loxodonta africana]
Length = 479
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|281371323|ref|NP_446162.1| paired box 3 [Rattus norvegicus]
Length = 484
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|226958470|ref|NP_001152992.1| paired box protein Pax-3 isoform b [Mus musculus]
gi|26336973|dbj|BAC32170.1| unnamed protein product [Mus musculus]
gi|28913680|gb|AAH48699.1| Pax3 protein [Mus musculus]
Length = 484
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|355750875|gb|EHH55202.1| hypothetical protein EGM_04358 [Macaca fascicularis]
Length = 473
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 298 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 325
>gi|328697098|ref|XP_001944012.2| PREDICTED: retinal homeobox protein Rx-like [Acyrthosiphon pisum]
Length = 290
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 94 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 153
Query: 115 REEKLRNQR 123
R+EK+ R
Sbjct: 154 RQEKMEAAR 162
>gi|53125994|emb|CAG25716.1| paired box protein 7 [Salvelinus alpinus]
Length = 514
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/158 (40%), Positives = 88/158 (55%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 196 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 247
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 248 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 307
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P + + + SS P P P SM
Sbjct: 308 MPSLPTYQLPECSYPGTTLSQDGSSTLHRPQPLPPSSM 345
>gi|348556456|ref|XP_003464037.1| PREDICTED: paired box protein Pax-3-like [Cavia porcellus]
Length = 484
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|149711152|ref|XP_001495210.1| PREDICTED: paired box protein Pax-3 isoform 2 [Equus caballus]
Length = 505
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTAIPQAVSDPSS 326
>gi|395823365|ref|XP_003784957.1| PREDICTED: paired box protein Pax-3 [Otolemur garnettii]
Length = 483
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 297
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 298 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 325
>gi|17647491|ref|NP_523863.1| gooseberry [Drosophila melanogaster]
gi|123376|sp|P09082.1|GSB_DROME RecName: Full=Protein gooseberry; AltName: Full=BSH9; AltName:
Full=Protein gooseberry distal
gi|10727095|gb|AAF47315.2| gooseberry [Drosophila melanogaster]
gi|212287970|gb|ACJ23460.1| FI07617p [Drosophila melanogaster]
Length = 427
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 80/135 (59%), Gaps = 23/135 (17%)
Query: 34 GDNSNPGSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
G + GS E EDD + ++LKRK +R+RT+F+NDQID LE+ F RT YPDV+ RE LA
Sbjct: 160 GGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELA 219
Query: 93 AKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGC 152
GL EAR+QVWFSNRRA+ R++ N +Q S PT ++S G
Sbjct: 220 QSTGLTEARVQVWFSNRRARLRKQ---LNTQQVPSFAPT---------------STSFGA 261
Query: 153 TP----SPAPQVSMD 163
TP +PAP + M
Sbjct: 262 TPTTSAAPAPNMGMS 276
>gi|290789888|pdb|3A01|B Chain B, Crystal Structure Of Aristaless And Clawless Homeodomains
Bo
gi|290789892|pdb|3A01|F Chain F, Crystal Structure Of Aristaless And Clawless Homeodomains
Bo
Length = 67
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 3 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 62
Query: 115 REEKL 119
++EK+
Sbjct: 63 KQEKV 67
>gi|66571172|gb|AAY51551.1| IP01408p [Drosophila melanogaster]
gi|220943358|gb|ACL84222.1| CG3388-PA [synthetic construct]
Length = 427
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 80/135 (59%), Gaps = 23/135 (17%)
Query: 34 GDNSNPGSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
G + GS E EDD + ++LKRK +R+RT+F+NDQID LE+ F RT YPDV+ RE LA
Sbjct: 160 GGAGSVGSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELA 219
Query: 93 AKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGC 152
GL EAR+QVWFSNRRA+ R++ N +Q S PT ++S G
Sbjct: 220 QSTGLTEARVQVWFSNRRARLRKQ---LNTQQVPSFAPT---------------STSFGA 261
Query: 153 TP----SPAPQVSMD 163
TP +PAP + M
Sbjct: 262 TPTTSAAPAPNMGMS 276
>gi|390464839|ref|XP_003733294.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 479
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|359682153|gb|AEV53628.1| paired box protein 7 [Sparus aurata]
Length = 502
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 68/99 (68%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G N S++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GSRMNEVSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQGTKLTEARVQVWFSNRRARWRKQ 273
>gi|31563344|ref|NP_852124.1| paired box protein Pax-3 isoform PAX3e [Homo sapiens]
gi|297669550|ref|XP_002812957.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Pongo
abelii]
gi|119591202|gb|EAW70796.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_g [Homo
sapiens]
Length = 505
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|432950125|ref|XP_004084398.1| PREDICTED: paired box protein Pax-7-like [Oryzias latipes]
Length = 403
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ +D+ G ++ S++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 189 KHSIDGILADK-----GSQADEVSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 240
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 241 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 279
>gi|74180492|dbj|BAE34184.1| unnamed protein product [Mus musculus]
Length = 484
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANRLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|53125916|emb|CAG25520.1| paired box protein 7 [Salvelinus alpinus]
Length = 513
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/158 (40%), Positives = 88/158 (55%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 195 KHSIDGILGDK-----GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 246
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 247 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 306
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P + + + SS P P P SM
Sbjct: 307 MPSLPTYQPPECSYPGTTLSQDGSSTLHRPQPLPPSSM 344
>gi|47219885|emb|CAF97155.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 12 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 71
Query: 115 REEKL 119
R+EKL
Sbjct: 72 RQEKL 76
>gi|4138292|emb|CAA07775.1| Rx2 protein [Oryzias latipes]
Length = 188
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 7 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNRRAKWR 66
Query: 115 REEKL 119
R+EK+
Sbjct: 67 RQEKM 71
>gi|45383598|ref|NP_989600.1| paired box 3 [Gallus gallus]
gi|19032358|dbj|BAB85652.1| paired-box transcription factor protein PAX3 [Gallus gallus]
Length = 484
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERASAAQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 277
>gi|403266763|ref|XP_003925532.1| PREDICTED: paired box protein Pax-3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 479
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|291392294|ref|XP_002712543.1| PREDICTED: paired box 3-like [Oryctolagus cuniculus]
Length = 505
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|198464863|ref|XP_002134862.1| GA23573 [Drosophila pseudoobscura pseudoobscura]
gi|198149913|gb|EDY73489.1| GA23573 [Drosophila pseudoobscura pseudoobscura]
Length = 661
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+ ++N ++E ED +++ + K +RNRT+F+ +Q+D LEKEFE++HYP V RE+LA
Sbjct: 364 VDTDANRVIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFEKSHYPCVSTREKLA 423
Query: 93 AKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGC 152
+ L EAR+QVWFSNRRAKWRR +++ +QR D T +
Sbjct: 424 GRTALSEARVQVWFSNRRAKWRRHQRVNMLKQR---DSTSTSTSPTPTPTPAGGPPPVAS 480
Query: 153 TPSPAPQVSMD 163
TP P PQ ++
Sbjct: 481 TPEPGPQKPLE 491
>gi|348534162|ref|XP_003454572.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 502
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ +GD N + D + L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGI--------LGDKCNRTDDASDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 294
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 295 MPTLPTYQLPESSYPSTTLSQEGSSTLHRPQPLPPSSM 332
>gi|338725621|ref|XP_003365175.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 403
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTAIPQAVSDPSS 326
>gi|170040740|ref|XP_001848147.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864330|gb|EDS27713.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 318
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Query: 35 DNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK-EFERTHYPDVFARERLAA 93
D S+ S+ + ED + RL+LKRKLQRNRTSFTN+QI+NLE+ EFERTHYPDVFARERL+
Sbjct: 220 DMSDKYSSEDDEDSELRLKLKRKLQRNRTSFTNEQIENLERAEFERTHYPDVFARERLSE 279
Query: 94 KIGLPEARIQV 104
+I LPEARIQV
Sbjct: 280 RIQLPEARIQV 290
>gi|26337003|dbj|BAC32185.1| unnamed protein product [Mus musculus]
Length = 479
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|226958472|ref|NP_032807.3| paired box protein Pax-3 isoform a [Mus musculus]
gi|60416408|sp|P24610.2|PAX3_MOUSE RecName: Full=Paired box protein Pax-3
gi|12852118|dbj|BAB29280.1| unnamed protein product [Mus musculus]
gi|74201793|dbj|BAE28501.1| unnamed protein product [Mus musculus]
Length = 479
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|86355079|dbj|BAE78774.1| paired box containing Pax3 [Pelodiscus sinensis]
Length = 418
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 84/153 (54%), Gaps = 17/153 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 119 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 172
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 173 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 232
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPT 165
P + S P+ PQ DP+
Sbjct: 233 MPTLPTYQL------SEPSYQPTSIPQAVSDPS 259
>gi|31563340|ref|NP_852122.1| paired box protein Pax-3 isoform PAX3 [Homo sapiens]
gi|332246649|ref|XP_003272465.1| PREDICTED: paired box protein Pax-3 isoform 2 [Nomascus leucogenys]
gi|1172022|sp|P23760.2|PAX3_HUMAN RecName: Full=Paired box protein Pax-3; AltName: Full=HuP2
gi|119591199|gb|EAW70793.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
gi|119591201|gb|EAW70795.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
Length = 479
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|67527267|gb|AAY68376.1| PaxB, partial [Trichoplax adhaerens]
Length = 318
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 72/104 (69%), Gaps = 10/104 (9%)
Query: 47 DDQAR-LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
D QA L+L+ KL+RNRT FT++QI LE F+ T YPDV+ RE LA+KIGL EAR+QVW
Sbjct: 210 DHQAADLKLQ-KLRRNRTMFTDEQIKKLEDIFKSTQYPDVYTREELASKIGLSEARVQVW 268
Query: 106 FSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSS 149
FSNRRAKWR+E K R+ P++ N+ + + N+ + +S
Sbjct: 269 FSNRRAKWRKEGKHRS--------PSKLSNDGSTTLFNSKSTNS 304
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 272 GEDSVCLSAGSDSEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 319
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 320 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 357
>gi|31563348|ref|NP_852126.1| paired box protein Pax-3 isoform PAX3g [Homo sapiens]
gi|119591198|gb|EAW70792.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_d [Homo
sapiens]
Length = 403
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|410969539|ref|XP_003991252.1| PREDICTED: uncharacterized protein LOC101082767 [Felis catus]
Length = 1024
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 9 ETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTND 68
ET+ K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +
Sbjct: 695 ETEESEKKAKHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAE 748
Query: 69 QIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQR 123
Q++ LE+ FERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N
Sbjct: 749 QLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHL 808
Query: 124 QRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
G PT P + + P+ PQ DP+
Sbjct: 809 IPGGFPPTAMPTLPTYQLSETSYQ------PTAIPQAVSDPSS 845
>gi|327282538|ref|XP_003225999.1| PREDICTED: retinal homeobox protein Rx-B-like [Anolis carolinensis]
Length = 495
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 297 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 356
Query: 115 REEKL 119
R+EKL
Sbjct: 357 RQEKL 361
>gi|397497244|ref|XP_003819424.1| PREDICTED: retina and anterior neural fold homeobox protein 2 [Pan
paniscus]
Length = 211
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|297264994|ref|XP_001107509.2| PREDICTED: paired box protein Pax-3 isoform 5 [Macaca mulatta]
gi|332246653|ref|XP_003272467.1| PREDICTED: paired box protein Pax-3 isoform 4 [Nomascus leucogenys]
gi|397495770|ref|XP_003818719.1| PREDICTED: paired box protein Pax-3 isoform 2 [Pan paniscus]
gi|410036243|ref|XP_001165286.2| PREDICTED: paired box protein Pax-3 isoform 3 [Pan troglodytes]
gi|426338714|ref|XP_004033319.1| PREDICTED: paired box protein Pax-3 isoform 2 [Gorilla gorilla
gorilla]
Length = 403
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|30142096|gb|AAP13872.1| paired box 3 splice variant PAX3G [Homo sapiens]
Length = 403
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|338725619|ref|XP_001495229.2| PREDICTED: paired box protein Pax-3 isoform 3 [Equus caballus]
Length = 424
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTAIPQAVSDPSS 326
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 272 GEDSVCLSAGSDSEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 319
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 320 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 357
>gi|301626100|ref|XP_002942236.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 509
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 191 KHSIDGILGDK-----GNRIDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 242
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 243 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 281
>gi|390464843|ref|XP_003733295.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 403
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|30142098|gb|AAP13873.1| paired box 3 splice variant PAX3H [Homo sapiens]
Length = 407
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|48928118|gb|AAT47737.1| PAX3/NCOA1 fusion protein [Homo sapiens]
Length = 850
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 184 KHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 237
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 238 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 276
>gi|109122933|ref|XP_001100945.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
isoform 1 [Macaca mulatta]
gi|355702984|gb|EHH29475.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
mulatta]
gi|355755326|gb|EHH59073.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
fascicularis]
Length = 184
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
G +L P ++ K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE
Sbjct: 13 GGSLGPGEEAP----KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPE 68
Query: 100 ARIQVWFSNRRAKWRREEKLRN 121
R+QVWF NRRAKWRR+E+L +
Sbjct: 69 VRVQVWFQNRRAKWRRQERLES 90
>gi|31563346|ref|NP_852125.1| paired box protein Pax-3 isoform PAX3h [Homo sapiens]
gi|119591203|gb|EAW70797.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_h [Homo
sapiens]
Length = 407
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|560583|gb|AAB30807.1| PAX7-FKHR=chimeric transcription factor(FKHR, PAX7) {translocation}
[human, alveolar rhabdomyosarcoma patient, Peptide, 420
aa]
Length = 420
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ D GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 156 KHSIDGILGDKGSANRLDE---GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 209
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 210 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 248
>gi|119589694|gb|EAW69288.1| retina and anterior neural fold homeobox like 1 [Homo sapiens]
Length = 230
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 70 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 129
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 130 RQERLES 136
>gi|195118214|ref|XP_002003635.1| GI21809 [Drosophila mojavensis]
gi|193914210|gb|EDW13077.1| GI21809 [Drosophila mojavensis]
Length = 392
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 57/75 (76%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKW 60
Query: 114 RREEKLRNQRQRGSA 128
R++EK+ + ++G+
Sbjct: 61 RKQEKMGGEYEKGAG 75
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 209 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 256
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 257 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 294
>gi|301626102|ref|XP_002942237.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Xenopus
(Silurana) tropicalis]
Length = 523
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRIDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|124054328|gb|ABM89379.1| PAX7 [Pongo pygmaeus]
Length = 189
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 6 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 62
Query: 100 ARIQVWFSNRRAKWRRE 116
AR+QVWFSNRRA+WR++
Sbjct: 63 ARVQVWFSNRRARWRKQ 79
>gi|74190896|dbj|BAE28229.1| unnamed protein product [Mus musculus]
Length = 479
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTVEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 299 MPTLPTYQLSETSYQ------PTSIPQAVSDPSS 326
>gi|110762829|ref|XP_001121339.1| PREDICTED: hypothetical protein LOC725502 [Apis mellifera]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 63/83 (75%), Gaps = 4/83 (4%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
+S+PGS ED Q+ KRK +R RT+FTN Q++ LE+ F++THYPDVF RE LA +I
Sbjct: 76 SSSPGS----EDRQSTGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRI 131
Query: 96 GLPEARIQVWFSNRRAKWRREEK 118
L EAR+QVWF NRRAKWR++EK
Sbjct: 132 QLTEARVQVWFQNRRAKWRKQEK 154
>gi|432103455|gb|ELK30560.1| Paired box protein Pax-3 [Myotis davidii]
Length = 506
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 173 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 226
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 227 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 286
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + + P+ PQ DP+
Sbjct: 287 MPTLPTYQLSETSYQ------PTAIPQAVSDPSS 314
>gi|190337675|gb|AAI63788.1| Rx3 protein [Danio rerio]
gi|190338758|gb|AAI63791.1| Rx3 protein [Danio rerio]
Length = 292
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 103 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 162
Query: 115 REEKL 119
R+EKL
Sbjct: 163 RQEKL 167
>gi|389614437|dbj|BAM20266.1| aristaless, partial [Papilio xuthus]
Length = 80
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR
Sbjct: 5 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 64
Query: 115 REEKL 119
++EK+
Sbjct: 65 KQEKV 69
>gi|18859339|ref|NP_571302.1| retinal homeobox protein Rx3 [Danio rerio]
gi|18202036|sp|O42358.1|RX3_DANRE RecName: Full=Retinal homeobox protein Rx3
gi|2240030|gb|AAB62327.1| retinal homeobox protein [Danio rerio]
Length = 292
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 103 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 162
Query: 115 REEKL 119
R+EKL
Sbjct: 163 RQEKL 167
>gi|344030244|ref|NP_001230664.1| retina and anterior neural fold homeobox protein 2 [Taeniopygia
guttata]
Length = 228
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 64/86 (74%), Gaps = 7/86 (8%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+++ P + E++Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 19 GESTPPAAA---EEEQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 71
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKL 119
K+ LPE R+QVWF NRRAKWRR+EK+
Sbjct: 72 KVNLPEVRVQVWFQNRRAKWRRQEKM 97
>gi|426386634|ref|XP_004059788.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 1 [Gorilla gorilla gorilla]
Length = 230
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 70 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 129
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 130 RQERLES 136
>gi|171544937|ref|NP_001116385.1| aristaless-related homeobox protein [Oryzias latipes]
gi|157410507|gb|ABV53977.1| aristaless-related homeobox protein [Oryzias latipes]
Length = 464
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 201 GEDSVCLSAGSDSEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 248
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 249 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQ 286
>gi|126338194|ref|XP_001365807.1| PREDICTED: paired box protein Pax-3 [Monodelphis domestica]
Length = 484
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSERAS---APQSDEGSDIDSELD---LPLKRKQRRSRTTFTAEQLEELERAF 238
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 298
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 299 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 326
>gi|432098045|gb|ELK27932.1| Paired box protein Pax-7 [Myotis davidii]
Length = 592
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 308 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 359
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 360 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 398
>gi|348507210|ref|XP_003441149.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oreochromis
niloticus]
Length = 308
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 69/112 (61%), Gaps = 14/112 (12%)
Query: 20 ELDGLGSDETCTTIGDNSNPGSNLEPED-DQARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
+LDG E C + NS N P D D LR RK +RNRT+FT Q++ LE F
Sbjct: 9 QLDG----ECCRSNTLNSGGFGNHAPTDFDDGFLR--RKQRRNRTTFTLQQLEALEAVFA 62
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADP 130
+THYPDVF RE LA KI L EAR+QVWF NRRAKWR+ E RGS+DP
Sbjct: 63 QTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTE-------RGSSDP 107
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 71/133 (53%), Gaps = 13/133 (9%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 200 GEDSVCLSAGSDSEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 247
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNN 144
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q S P P + + +
Sbjct: 248 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQAHP-SGLPFPGPLAAGHPLSHY 306
Query: 145 NNNSSDGCTPSPA 157
P PA
Sbjct: 307 LEGGPFPHHPHPA 319
>gi|296232532|ref|XP_002761628.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Callithrix jacchus]
Length = 227
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 67 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 126
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 127 RQERLES 133
>gi|219918516|emb|CAQ05991.1| retinal homeobox protein Rx [Dugesia japonica]
Length = 272
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 53/64 (82%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA KI LPE R+QVWF NRRAKWRR
Sbjct: 89 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRR 148
Query: 116 EEKL 119
+EK+
Sbjct: 149 QEKI 152
>gi|194759514|ref|XP_001961992.1| GF15246 [Drosophila ananassae]
gi|190615689|gb|EDV31213.1| GF15246 [Drosophila ananassae]
Length = 589
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 107
Query: 114 RREEKLRN-QRQR 125
R+ E+L++ QR+R
Sbjct: 108 RKAERLKDEQRKR 120
>gi|2145076|gb|AAB58415.1| paired-box transcription factor protein [Coturnix coturnix]
Length = 479
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 70/99 (70%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 180 KHSIDGILSERASA---PQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 233
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 234 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 272
>gi|73987445|ref|XP_854816.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Canis lupus familiaris]
Length = 184
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 5/80 (6%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRNQRQRGSADPTQAP 134
R+E+L + + P AP
Sbjct: 84 RQERLES-----GSGPVAAP 98
>gi|51869705|emb|CAH04389.1| paired box protein 7 [Salmo salar]
Length = 508
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 16/142 (11%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ ++ GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA
Sbjct: 201 GNRTDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 257
Query: 94 KIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNNN 140
+ L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 258 RTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPG 317
Query: 141 IVNNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 318 TTLSQDGSSTLHRPQPLPPSSM 339
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 125 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 172
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 173 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 210
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 65 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 124
Query: 114 RREEKLRN-QRQR 125
R+ E+L++ QR+R
Sbjct: 125 RKAERLKDEQRKR 137
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 169 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 216
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 217 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 254
>gi|18202262|sp|O97039.1|RX_DUGJA RecName: Full=Retinal homeobox protein Rax; AltName: Full=DjRax
gi|4519627|dbj|BAA75673.1| Djrax [Dugesia japonica]
Length = 268
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 53/64 (82%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA KI LPE R+QVWF NRRAKWRR
Sbjct: 85 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRR 144
Query: 116 EEKL 119
+EK+
Sbjct: 145 QEKI 148
>gi|449266925|gb|EMC77903.1| Paired box protein Pax-3, partial [Columba livia]
Length = 459
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 70/99 (70%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 160 KHSIDGILSERASA---PQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 213
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 214 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 252
>gi|334326510|ref|XP_001373881.2| PREDICTED: retinal homeobox protein Rx1-like [Monodelphis
domestica]
Length = 208
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 6/81 (7%)
Query: 39 PGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
PGS E D+A K+K +RNRT+FT Q+ LE+ FER+HYPDV++RE LA ++ LP
Sbjct: 16 PGSG---EADEAP---KKKHRRNRTTFTTFQLHQLERAFERSHYPDVYSREELAMQVNLP 69
Query: 99 EARIQVWFSNRRAKWRREEKL 119
E R+QVWF NRRAKWRR+EKL
Sbjct: 70 EVRVQVWFQNRRAKWRRQEKL 90
>gi|328703933|ref|XP_001942790.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
[Acyrthosiphon pisum]
Length = 408
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LAAKI L EAR+QVWF NRRAKW
Sbjct: 47 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAAKIQLTEARVQVWFQNRRAKW 106
Query: 114 RREEKLR-NQRQRGSAD 129
R+ E+L+ QR+R D
Sbjct: 107 RKAERLKEEQRKREEHD 123
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 8/111 (7%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+QVWF NRRAKW
Sbjct: 158 LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKW 217
Query: 114 RREEKLRNQRQRGSADPTQAPNN--------NNNNIVNNNNNSSDGCTPSP 156
R+ EK+ Q S + AP + N V N + + D P+P
Sbjct: 218 RKREKVGVQPHTLSLHYSGAPPAAQSLCHYLSGNPFVPNPHPAIDSAWPAP 268
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 201 GEDSVCLSAGSDSEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 248
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 249 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQ 286
>gi|344030211|ref|NP_989435.2| retinal homeobox protein Rx2 [Gallus gallus]
gi|18203380|sp|Q9PVY0.1|RX1_CHICK RecName: Full=Retinal homeobox protein Rx1; Short=cRax1
gi|23451261|gb|AAN32719.1|AF420601_1 homeobox transcription factor RAX2 [Gallus gallus]
gi|6002393|dbj|BAA84748.1| homeobox protein cRaxL/Rax1/Rx1 [Gallus gallus]
Length = 228
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 33 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 92
Query: 115 REEKL 119
R+EK+
Sbjct: 93 RQEKM 97
>gi|328718058|ref|XP_003246373.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 1
[Acyrthosiphon pisum]
gi|328718060|ref|XP_003246374.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 2
[Acyrthosiphon pisum]
gi|328718062|ref|XP_003246375.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 3
[Acyrthosiphon pisum]
gi|328718064|ref|XP_003246376.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 4
[Acyrthosiphon pisum]
Length = 218
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 22 DGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTH 81
D G D DN +L D + +KRK +R RT+FTN Q++ LE F++TH
Sbjct: 40 DVTGCDSPSDRCDDNDQSSGSLST-DQNSNSNVKRKQRRYRTTFTNFQLEELENSFQKTH 98
Query: 82 YPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNI 141
YPDVF RE LA +I L EAR+QVWF NRRAKWR++EK + + +P P +N +
Sbjct: 99 YPDVFFREELAMRIDLTEARVQVWFQNRRAKWRKQEKTLVSQHQSQNEPIINPCLTDNPM 158
Query: 142 VNNNNN 147
N+++
Sbjct: 159 FGNSSS 164
>gi|431917932|gb|ELK17161.1| Paired box protein Pax-3 [Pteropus alecto]
Length = 320
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 14/132 (10%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 40 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 96
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTP 154
AR+QVWFSNRRA+WR++ N G PT P + + P
Sbjct: 97 ARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQ------P 150
Query: 155 SPAPQVSMDPTD 166
+ PQ DP+
Sbjct: 151 TAIPQAVSDPSS 162
>gi|332255913|ref|XP_003277070.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 1 [Nomascus leucogenys]
Length = 230
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 70 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 129
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 130 RQERLES 136
>gi|344258001|gb|EGW14105.1| Paired box protein Pax-3 [Cricetulus griseus]
Length = 301
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 78/140 (55%), Gaps = 14/140 (10%)
Query: 32 TIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
T S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE L
Sbjct: 13 TSAPQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREEL 69
Query: 92 AAKIGLPEARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPTQAPNNNNNNIVNNNN 146
A + L EAR+QVWFSNRRA+WR++ N G PT P +
Sbjct: 70 AQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQL----- 124
Query: 147 NSSDGCTPSPAPQVSMDPTD 166
S P+ PQ DP+
Sbjct: 125 -SETSYQPTSIPQAVSDPSS 143
>gi|47224832|emb|CAG06402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 99.8 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
Query: 31 TTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+T +S+ GS+ E E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE
Sbjct: 236 STAASHSDEGSDFESEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREE 292
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRRE 116
LA + L EAR+QVWFSNRRA+WR++
Sbjct: 293 LAQRAKLTEARVQVWFSNRRARWRKQ 318
>gi|291407255|ref|XP_002720021.1| PREDICTED: aristaless related homeobox [Oryctolagus cuniculus]
Length = 454
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 199 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 246
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 247 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 284
>gi|395512821|ref|XP_003760632.1| PREDICTED: retinal homeobox protein Rx1-like [Sarcophilus harrisii]
Length = 208
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 58/81 (71%)
Query: 39 PGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
P P +A K+K +RNRT+FT Q+ LE+ FER+HYPDV++RE LA ++ LP
Sbjct: 10 PAEGRAPGSGEAEDAPKKKHRRNRTTFTTFQLHQLERAFERSHYPDVYSREELATQVNLP 69
Query: 99 EARIQVWFSNRRAKWRREEKL 119
E R+QVWF NRRAKWRR+EKL
Sbjct: 70 EVRVQVWFQNRRAKWRRQEKL 90
>gi|326934275|ref|XP_003213217.1| PREDICTED: retinal homeobox protein Rx1-like [Meleagris gallopavo]
Length = 228
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 33 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 92
Query: 115 REEKL 119
R+EK+
Sbjct: 93 RQEKM 97
>gi|219918518|emb|CAQ05992.1| retinal homeobox protein Rx [Schmidtea mediterranea]
Length = 272
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 53/64 (82%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA KI LPE R+QVWF NRRAKWRR
Sbjct: 89 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRR 148
Query: 116 EEKL 119
+EK+
Sbjct: 149 QEKI 152
>gi|399146686|gb|AFP25465.1| paired box 3 [Anas platyrhynchos]
Length = 482
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 70/99 (70%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILSER-----APQSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 275
>gi|335282410|ref|XP_003354059.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Sus scrofa]
Length = 203
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 43 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 102
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 103 RQERLES 109
>gi|426230726|ref|XP_004009413.1| PREDICTED: retina and anterior neural fold homeobox protein 2 [Ovis
aries]
Length = 188
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 38 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 97
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 98 RQERLES 104
>gi|736381|gb|AAA64491.1| Pax7 [Mus musculus]
Length = 290
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS +E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 149 KHSIDGILGDK-----GNRLDEGSGVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 200
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR QVWFSNRRA+WR++
Sbjct: 201 ERTHYPDIYTREELAQRTKLTEARFQVWFSNRRARWRKQ 239
>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
Length = 161
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 33 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 80
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 81 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 118
>gi|432857459|ref|XP_004068691.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oryzias
latipes]
Length = 517
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 19/158 (12%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D++ G ++ GS+++ E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 196 KHSIDGILGDKS---PGSRTDDGSDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 249
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 250 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 309
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 310 MPTLPTYQLPESSYPSTTLSQEGSSTLHRPQPLPPSSM 347
>gi|410950169|ref|XP_003981784.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Felis catus]
Length = 159
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTDFN 168
R+E+L + + P ++ P P Q S P F
Sbjct: 84 RQERLESGSGAVALGPGPPAVPGLPRLLG----------PGPGLQASFGPHAFG 127
>gi|195380431|ref|XP_002048974.1| GJ21022 [Drosophila virilis]
gi|194143771|gb|EDW60167.1| GJ21022 [Drosophila virilis]
Length = 442
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 66/97 (68%), Gaps = 8/97 (8%)
Query: 21 LDGLGSDETCTTIGDNSNPGSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFER 79
+DG+ C+ GS E EDD + ++LKRK +R+RT+F+NDQID LE+ F R
Sbjct: 159 IDGILGGGACSA-------GSEDESEDDTEPSVQLKRKQRRSRTTFSNDQIDALERIFAR 211
Query: 80 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
T YPDV+ RE LA GL EAR+QVWFSNRRA+ R++
Sbjct: 212 TQYPDVYTREELAQGTGLTEARVQVWFSNRRARLRKQ 248
>gi|224059972|ref|XP_002194011.1| PREDICTED: paired box protein Pax-3 [Taeniopygia guttata]
Length = 529
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 230 KHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 283
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 284 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 322
>gi|332261023|ref|XP_003279579.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Nomascus leucogenys]
Length = 518
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|149639200|ref|XP_001516357.1| PREDICTED: retinal homeobox protein Rx1-like [Ornithorhynchus
anatinus]
Length = 231
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QVWF NRRAKWR
Sbjct: 35 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 94
Query: 115 REEKL 119
R+EK+
Sbjct: 95 RQEKM 99
>gi|146325675|sp|A1YG25.1|RAX2_PANPA RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|121483898|gb|ABM54250.1| MGC15631 [Pan paniscus]
Length = 184
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|125490351|ref|NP_001074956.1| retina and anterior neural fold homeobox protein 2 [Pan
troglodytes]
gi|146325676|sp|A2T711.1|RAX2_PANTR RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|124111168|gb|ABM91966.1| MGC15631 [Pan troglodytes]
Length = 184
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|432916066|ref|XP_004079275.1| PREDICTED: paired box protein Pax-3 [Oryzias latipes]
Length = 487
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D + +S+ GS++ D + L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 188 KHSIDGILGDRS-----SHSDEGSDV---DSEPGLPLKRKQRRSRTTFTAEQLEELERAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 240 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 278
>gi|195376715|ref|XP_002047138.1| GJ13266 [Drosophila virilis]
gi|194154296|gb|EDW69480.1| GJ13266 [Drosophila virilis]
Length = 594
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/99 (48%), Positives = 69/99 (69%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
++N ++E E + + K +RNRT+F+ +Q+D LEKEFE++HYP V RE+LAA+
Sbjct: 352 DANRMIDIEGEGSDSEDSDQPKFRRNRTTFSAEQLDELEKEFEKSHYPCVGTREKLAART 411
Query: 96 GLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
L EAR+QVWFSNRRAKWRR +++ +QR SA + P
Sbjct: 412 ALSEARVQVWFSNRRAKWRRHQRVNQLKQRDSASTSPQP 450
>gi|14249388|ref|NP_116142.1| retina and anterior neural fold homeobox protein 2 [Homo sapiens]
gi|426386636|ref|XP_004059789.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 2 [Gorilla gorilla gorilla]
gi|74760880|sp|Q96IS3.1|RAX2_HUMAN RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Q50-type retinal homeobox protein;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|13938311|gb|AAH07284.1| RAX2 protein [Homo sapiens]
gi|17511706|gb|AAH18709.1| Retina and anterior neural fold homeobox 2 [Homo sapiens]
gi|21619116|gb|AAH32512.1| Retina and anterior neural fold homeobox 2 [Homo sapiens]
gi|32395648|gb|AAP41547.1| Q50-type retinal homeobox [Homo sapiens]
Length = 184
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
Length = 464
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+G+ + PG + + D + L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA
Sbjct: 165 LGEKNGPGDSSD-CDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELA 223
Query: 93 AKIGLPEARIQVWFSNRRAKWRREE 117
+ L EAR+QVWFSNRRA+WR+++
Sbjct: 224 QRTKLTEARVQVWFSNRRARWRKQQ 248
>gi|354505845|ref|XP_003514978.1| PREDICTED: paired box protein Pax-3-like, partial [Cricetulus
griseus]
Length = 288
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 8 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 64
Query: 100 ARIQVWFSNRRAKWRRE 116
AR+QVWFSNRRA+WR++
Sbjct: 65 ARVQVWFSNRRARWRKQ 81
>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
Length = 464
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 66/87 (75%), Gaps = 5/87 (5%)
Query: 33 IGDNSNPG--SNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+G+ + PG S+ + E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE
Sbjct: 165 LGEKNGPGDSSDCDSEPD---LPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREE 221
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREE 117
LA + L EAR+QVWFSNRRA+WR+++
Sbjct: 222 LAQRTKLTEARVQVWFSNRRARWRKQQ 248
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 48 VRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 107
Query: 114 RREEKLR-NQRQR------GSADPTQ-APNNNNNNIVNNNNNSSDGCTPSPAP 158
R+ E+L+ QR+R G+ + T AP +++ + + +G T S AP
Sbjct: 108 RKSERLKEEQRKREGNGGGGALETTGLAPPTSSSAGPSPTGHDPEGTTSSSAP 160
>gi|395731076|ref|XP_003775838.1| PREDICTED: paired box protein Pax-7 isoform 2 [Pongo abelii]
Length = 518
Score = 99.4 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|410899545|ref|XP_003963257.1| PREDICTED: homeobox protein aristaless-like 3-like [Takifugu
rubripes]
Length = 359
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 6/98 (6%)
Query: 23 GLGSDETCTTIGDNSNPGSNLEPED--DQARLRLKRKLQRNRTSFTNDQIDNLEKEFERT 80
G+G D G PG L PE D L K K +RNRT+F+ Q++ LEK F++T
Sbjct: 125 GIGVD----CCGKLKEPGGGLHPESIADSIDLSGKNKKRRNRTTFSTFQLEELEKVFQKT 180
Query: 81 HYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
HYPDV+ARE+LA + L EAR+QVWF NRRAKWR+ E+
Sbjct: 181 HYPDVYAREQLALRTELTEARVQVWFQNRRAKWRKRER 218
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 6/111 (5%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 172 VRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 231
Query: 114 RREEKLR-NQRQR----GSADPTQ-APNNNNNNIVNNNNNSSDGCTPSPAP 158
R+ E+L+ QR+R G+ + T AP +++ + + +G T S AP
Sbjct: 232 RKSERLKEEQRKREGGGGALETTGLAPPTSSSAGPSPTGHDPEGTTNSSAP 282
>gi|426328067|ref|XP_004024824.1| PREDICTED: paired box protein Pax-7 isoform 1 [Gorilla gorilla
gorilla]
Length = 518
Score = 99.4 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 254 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 301
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 302 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 339
>gi|326925807|ref|XP_003209100.1| PREDICTED: paired box protein Pax-3-like [Meleagris gallopavo]
Length = 304
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Query: 37 SNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIG 96
S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA +
Sbjct: 46 SDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAK 102
Query: 97 LPEARIQVWFSNRRAKWRRE 116
L EAR+QVWFSNRRA+WR++
Sbjct: 103 LTEARVQVWFSNRRARWRKQ 122
>gi|30841697|gb|AAP34699.1| aristaless-like homeobox protein [Lytechinus variegatus]
Length = 429
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 81/138 (58%), Gaps = 19/138 (13%)
Query: 5 EKPLETKRFNTTDKIELDGLGS-------DETCTTIGDNS-------NPGSNLEPEDDQA 50
+ PL + +T+ L G+GS D T G N +PG +P+DD
Sbjct: 52 DSPLTDRSMDTSTPGLLGGVGSGIHKSEQDSTNNNAGANGKGNDDVKSPG---DPKDDDK 108
Query: 51 R-LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNR 109
KRK +RNRT+FT+ Q++ +EK F+RTHYPDV+ RE+LA + L EAR+QVWF NR
Sbjct: 109 NDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 168
Query: 110 RAKWRREEKLRN-QRQRG 126
RAKWR+ E+ + Q RG
Sbjct: 169 RAKWRKRERFQQFQNMRG 186
>gi|555819|gb|AAA80574.1| paired box homeotic protein [Homo sapiens]
Length = 283
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 8 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 64
Query: 100 ARIQVWFSNRRAKWRRE 116
AR+QVWFSNRRA+WR++
Sbjct: 65 ARVQVWFSNRRARWRKQ 81
>gi|78370178|gb|ABB43130.1| Pax-6 [Daphnia pulex]
Length = 288
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 51/56 (91%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
ED Q RLRLKRKLQRNRTSFTN+Q ++LEKEFERTHYPDV ARERLA KIGLPEAR
Sbjct: 233 EDPQMRLRLKRKLQRNRTSFTNEQXESLEKEFERTHYPDVXARERLAEKIGLPEAR 288
>gi|402889486|ref|XP_003908046.1| PREDICTED: paired box protein Pax-3 isoform 1 [Papio anubis]
Length = 483
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 37 SNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIG 96
S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA +
Sbjct: 200 SDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAK 256
Query: 97 LPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQAPNNNNNNIVNNNNNSSDG 151
L EAR+QVWFSNRRA+WR++ N G PT P + +
Sbjct: 257 LTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQLSETSYQ---- 312
Query: 152 CTPSPAPQVSMDPTD 166
P+ PQ DP+
Sbjct: 313 --PTSIPQAVSDPSS 325
>gi|338717161|ref|XP_001500343.3| PREDICTED: dorsal root ganglia homeobox protein-like [Equus
caballus]
Length = 265
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 31 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 90
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ ++++ G+ +P
Sbjct: 91 RKTERGASEQEPGAKEP 107
>gi|259013476|ref|NP_001158481.1| dorsal root ganglia homeobox [Saccoglossus kowalevskii]
gi|197734655|gb|ACH73223.1| dorsal root ganglion homeobox protein [Saccoglossus kowalevskii]
Length = 328
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 54/74 (72%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F RTHYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 52 LRRKQRRNRTTFTAQQLEELESAFGRTHYPDVFTREDLAVKINLTEARVQVWFQNRRAKW 111
Query: 114 RREEKLRNQRQRGS 127
R+ EK R R S
Sbjct: 112 RKTEKGRPDETRDS 125
>gi|441656477|ref|XP_004091120.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Nomascus leucogenys]
Length = 184
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKWR
Sbjct: 46 RRKQRRNRTTFTLQQLEELENAFAKTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWR 105
Query: 115 REEKLRNQRQRGS 127
+ E++++ +G+
Sbjct: 106 KMERMKHDHTKGT 118
>gi|146325674|sp|A1YEV8.1|RAX2_GORGO RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|120974352|gb|ABM46676.1| MGC15631 [Gorilla gorilla]
Length = 184
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|148668013|gb|EDL00430.1| paired box gene 3 [Mus musculus]
Length = 284
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 9 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 65
Query: 100 ARIQVWFSNRRAKWRRE 116
AR+QVWFSNRRA+WR++
Sbjct: 66 ARVQVWFSNRRARWRKQ 82
>gi|345794077|ref|XP_544533.3| PREDICTED: paired box protein Pax-7 [Canis lupus familiaris]
Length = 636
Score = 99.4 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 316 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 367
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 368 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 406
>gi|297703116|ref|XP_002828498.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 2 [Pongo abelii]
Length = 184
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|195586621|ref|XP_002083072.1| GD11918 [Drosophila simulans]
gi|194195081|gb|EDX08657.1| GD11918 [Drosophila simulans]
Length = 427
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 76/125 (60%), Gaps = 23/125 (18%)
Query: 44 EPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARI 102
E EDD + ++LKRK +R+RT+F+NDQID LE+ F RT YPDV+ RE LA GL EAR+
Sbjct: 170 ESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARV 229
Query: 103 QVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTP----SPAP 158
QVWFSNRRA+ R++ N +Q S PT ++S G TP +PAP
Sbjct: 230 QVWFSNRRARLRKQ---LNTQQVSSFAPT---------------STSYGATPTTSAAPAP 271
Query: 159 QVSMD 163
+ M
Sbjct: 272 NMGMS 276
>gi|4505619|ref|NP_002575.1| paired box protein Pax-7 isoform 1 [Homo sapiens]
gi|8247951|sp|P23759.3|PAX7_HUMAN RecName: Full=Paired box protein Pax-7; AltName: Full=HuP1
gi|2570015|emb|CAA65522.1| PAX7 [Homo sapiens]
gi|2570021|emb|CAA65520.1| paired box containing transcription factor [Homo sapiens]
gi|119615261|gb|EAW94855.1| paired box gene 7, isoform CRA_c [Homo sapiens]
Length = 520
Score = 99.4 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 185 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 275
>gi|377685596|gb|AFB74467.1| RX, partial [Schmidtea polychroa]
Length = 199
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 53/64 (82%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA KI LPE R+QVWF NRRAKWRR
Sbjct: 37 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRR 96
Query: 116 EEKL 119
+EK+
Sbjct: 97 QEKI 100
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 123 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 170
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 171 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 208
>gi|195589818|ref|XP_002084646.1| GD12721 [Drosophila simulans]
gi|194196655|gb|EDX10231.1| GD12721 [Drosophila simulans]
Length = 635
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 65/84 (77%)
Query: 42 NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
++E ED +++ + K +RNRT+F+ +Q+D LEKEF+++HYP V RE+LAA+ L EAR
Sbjct: 364 DIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEAR 423
Query: 102 IQVWFSNRRAKWRREEKLRNQRQR 125
+QVWFSNRRAKWRR +++ +QR
Sbjct: 424 VQVWFSNRRAKWRRHQRVNLLKQR 447
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 107
Query: 114 RREEKLRN-QRQR 125
R+ E+L++ QR+R
Sbjct: 108 RKAERLKDEQRKR 120
>gi|388240432|dbj|BAM15710.1| paired box gene 3 [Scyliorhinus torazame]
Length = 506
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 72/99 (72%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ +++ +NS+ S+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 185 KHSIDGILANK-----ANNSDEASDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 236
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 237 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 275
>gi|195327123|ref|XP_002030271.1| GM24657 [Drosophila sechellia]
gi|194119214|gb|EDW41257.1| GM24657 [Drosophila sechellia]
Length = 633
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 65/84 (77%)
Query: 42 NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
++E ED +++ + K +RNRT+F+ +Q+D LEKEF+++HYP V RE+LAA+ L EAR
Sbjct: 364 DIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEAR 423
Query: 102 IQVWFSNRRAKWRREEKLRNQRQR 125
+QVWFSNRRAKWRR +++ +QR
Sbjct: 424 VQVWFSNRRAKWRRHQRVNLLKQR 447
>gi|32880216|ref|NP_872594.1| retina and anterior neural fold homeobox protein 2 [Bos taurus]
gi|75046044|sp|Q7YRX0.1|RAX2_BOVIN RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Q50-type retinal homeobox protein;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|32395646|gb|AAP41546.1| Q50-type retinal homeobox [Bos taurus]
gi|296485724|tpg|DAA27839.1| TPA: retina and anterior neural fold homeobox protein 2 [Bos
taurus]
gi|440905907|gb|ELR56224.1| Retina and anterior neural fold homeobox protein 2 [Bos grunniens
mutus]
Length = 184
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|49903856|gb|AAH76069.1| Pax3a protein [Danio rerio]
Length = 445
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D + +S+ GS++ D + L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 188 KHSIDGILGDRS-----SHSDEGSDV---DSEPGLPLKRKQRRSRTTFTAEQLEELERAF 239
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 240 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 278
>gi|157107387|ref|XP_001649756.1| hypothetical protein AaeL_AAEL014848 [Aedes aegypti]
gi|108868691|gb|EAT32916.1| AAEL014848-PA, partial [Aedes aegypti]
Length = 169
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 65/115 (56%), Gaps = 24/115 (20%)
Query: 50 ARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNR 109
A L +KL+RNRT+F++DQ+ LE+ FERTHYPD F RE +A+K+GL EAR+QVWF NR
Sbjct: 9 AGLSSNKKLRRNRTTFSSDQLSALEQIFERTHYPDAFLREEIASKVGLSEARVQVWFQNR 68
Query: 110 RAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSMDP 164
RAK+RR E+ N N S C SPA S P
Sbjct: 69 RAKFRRNER------------------------NINVGSQSLCAISPALHFSKTP 99
>gi|432861307|ref|XP_004069603.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 8/138 (5%)
Query: 34 GDNSNPGSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
G + PGS L P D K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA
Sbjct: 148 GSSERPGSELSSPLDKSEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 207
Query: 93 AKIGLPEARIQVWFSNRRAKWRREEK------LRNQRQRGSADPTQAPNNNNNNIVNNN- 145
+ L EAR+QVWF NRRAKWR+ E+ +R P N I N++
Sbjct: 208 LRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNSSW 267
Query: 146 NNSSDGCTPSPAPQVSMD 163
SS G +P P V D
Sbjct: 268 IGSSSGASPVPGCVVPCD 285
>gi|54289376|gb|AAV31938.1| paired-box 3 [Xenopus laevis]
Length = 459
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 14/132 (10%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 180 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 236
Query: 100 ARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTP 154
AR+QVWFSNRRA+WR++ N G+ PT P + + P
Sbjct: 237 ARVQVWFSNRRARWRKQAGANQLMAFNHLIPGAFPPTAMPALPTYQLSETSYQ------P 290
Query: 155 SPAPQVSMDPTD 166
+ PQ DP++
Sbjct: 291 TSIPQAVSDPSN 302
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G + C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 271 GEESVCLSAGSDSEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 318
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 319 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 356
>gi|432857455|ref|XP_004068689.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oryzias
latipes]
Length = 510
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 19/158 (12%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D++ G ++ GS+++ E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 189 KHSIDGILGDKS---PGSRTDDGSDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 242
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 243 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 302
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 303 MPTLPTYQLPESSYPSTTLSQEGSSTLHRPQPLPPSSM 340
>gi|53125980|emb|CAG25715.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 16/140 (11%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA +
Sbjct: 205 DKDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 261
Query: 96 GLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNNNIV 142
L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 262 KLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTT 321
Query: 143 NNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 322 LSQDGSSTLHRPQPLPPSSM 341
>gi|51869695|emb|CAH04384.1| paired box protein 7 [Salmo salar]
Length = 515
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 16/140 (11%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA +
Sbjct: 210 DKDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 266
Query: 96 GLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNNNIV 142
L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 267 KLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTT 326
Query: 143 NNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 327 LSQDGSSTLHRPQPLPPSSM 346
>gi|381216174|gb|AFF61347.1| paired box protein 7 alpha variant 1 [Oncorhynchus mykiss]
Length = 515
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 16/140 (11%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA +
Sbjct: 210 DKDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 266
Query: 96 GLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNNNIV 142
L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 267 KLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTT 326
Query: 143 NNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 327 LSQDGSSTLHRPQPLPPSSM 346
>gi|114554358|ref|XP_513156.2| PREDICTED: paired box protein Pax-7 isoform 2 [Pan troglodytes]
Length = 518
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|147903833|ref|NP_001088994.1| paired box protein Pax-3-B [Xenopus laevis]
gi|52082692|gb|AAU25939.1| paired-domain transcription factor Pax3delta isoform [Xenopus
laevis]
Length = 461
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 14/132 (10%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 182 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 238
Query: 100 ARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTP 154
AR+QVWFSNRRA+WR++ N G+ PT P + + P
Sbjct: 239 ARVQVWFSNRRARWRKQAGANQLMAFNHLIPGAFPPTAMPALPTYQLSETSYQ------P 292
Query: 155 SPAPQVSMDPTD 166
+ PQ DP++
Sbjct: 293 TSIPQAVSDPSN 304
>gi|7524359|ref|NP_039236.1| paired box protein Pax-7 isoform 2 [Homo sapiens]
gi|2570014|emb|CAA65521.1| PAX7 [Homo sapiens]
gi|111307751|gb|AAI21166.1| Paired box 7 [Homo sapiens]
gi|111307754|gb|AAI21167.1| Paired box 7 [Homo sapiens]
gi|119615259|gb|EAW94853.1| paired box gene 7, isoform CRA_a [Homo sapiens]
Length = 518
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 183 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|54289374|gb|AAV31937.1| paired-box 3 [Xenopus laevis]
Length = 460
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+ S GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA
Sbjct: 174 VSPESEEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 230
Query: 93 AKIGLPEARIQVWFSNRRAKWRRE 116
+ L EAR+QVWFSNRRA+WR++
Sbjct: 231 QRAKLTEARVQVWFSNRRARWRKQ 254
>gi|355744963|gb|EHH49588.1| hypothetical protein EGM_00276, partial [Macaca fascicularis]
Length = 516
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 181 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 232
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 233 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 271
>gi|348534164|ref|XP_003454573.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 516
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+GD N + D + L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA
Sbjct: 204 LGDKCNRTDDASDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELA 263
Query: 93 AKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNN 139
+ L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 264 QRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTLPTYQLPESSYP 323
Query: 140 NIVNNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 324 STTLSQEGSSTLHRPQPLPPSSM 346
>gi|139001547|dbj|BAF51689.1| Pax6 [Dicyema acuticephalum]
gi|139001549|dbj|BAF51690.1| Pax6 [Dicyema acuticephalum]
Length = 408
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 60/75 (80%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+K+K QRNRTSF+ +Q+ +++ F+++HYPD+ RE+++ K+ +PEARIQVWFSNRRAKW
Sbjct: 192 VKKKSQRNRTSFSAEQLKTMDEHFQQSHYPDISIREKISEKLNIPEARIQVWFSNRRAKW 251
Query: 114 RREEKLRNQRQRGSA 128
RREEKL R SA
Sbjct: 252 RREEKLNEDRGNESA 266
>gi|224493168|sp|Q0IH87.2|PAX3B_XENLA RecName: Full=Paired box protein Pax-3-B; Short=xPax3-B; AltName:
Full=Paired-domain transcription factor Pax3-B
Length = 483
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 14/132 (10%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 204 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 260
Query: 100 ARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTP 154
AR+QVWFSNRRA+WR++ N G+ PT P + + P
Sbjct: 261 ARVQVWFSNRRARWRKQAGANQLMAFNHLIPGAFPPTAMPALPTYQLSETSYQ------P 314
Query: 155 SPAPQVSMDPTD 166
+ PQ DP++
Sbjct: 315 TSIPQAVSDPSN 326
>gi|80479306|gb|AAI08574.1| Pax3 protein [Xenopus laevis]
Length = 460
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+ S GS+++ E D L LKRK +R RT+FT +Q++ LE+ FERTHYPD++ RE LA
Sbjct: 174 VSPESEEGSDIDSEPD---LPLKRKQRRGRTTFTAEQLEELERAFERTHYPDIYTREELA 230
Query: 93 AKIGLPEARIQVWFSNRRAKWRRE 116
+ L EAR+QVWFSNRRA+WR++
Sbjct: 231 QRAKLTEARVQVWFSNRRARWRKQ 254
>gi|348570856|ref|XP_003471212.1| PREDICTED: paired box protein Pax-7 [Cavia porcellus]
Length = 517
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D+ G+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 198 KHSIDGILGDK-----GNRLDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 249
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 250 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 288
>gi|311271509|ref|XP_003133155.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Sus scrofa]
Length = 263
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ ++++ G+ +P
Sbjct: 89 RKTERGASEQEPGAKEP 105
>gi|410908185|ref|XP_003967571.1| PREDICTED: homeobox protein aristaless-like 4-like [Takifugu
rubripes]
Length = 365
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 74/135 (54%), Gaps = 8/135 (5%)
Query: 39 PGSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGL 97
PGS L P D K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L
Sbjct: 151 PGSELSSPLDKTEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDL 210
Query: 98 PEARIQVWFSNRRAKWRREEKLRNQRQ------RGSADPTQAPNNNNNNIVNNN-NNSSD 150
EAR+QVWF NRRAKWR+ E+ +Q P N I N SS
Sbjct: 211 TEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPILTRPENYAQIQNPTWIGSSS 270
Query: 151 GCTPSPAPQVSMDPT 165
G +P P V DP
Sbjct: 271 GASPVPGCVVPCDPV 285
>gi|405951906|gb|EKC19775.1| Dorsal root ganglia homeobox protein [Crassostrea gigas]
Length = 492
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 55/73 (75%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
+RK +RNRT+FT Q++ LEK F +THYPDVF RE LA +I L EAR+QVWF NRRAKWR
Sbjct: 95 RRKQRRNRTTFTLQQLEELEKAFAQTHYPDVFTREDLAMRINLTEARVQVWFQNRRAKWR 154
Query: 115 REEKLRNQRQRGS 127
+ E+ Q + G+
Sbjct: 155 KSERFTQQSKSGA 167
>gi|402889488|ref|XP_003908047.1| PREDICTED: paired box protein Pax-3 isoform 2 [Papio anubis]
Length = 403
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 37 SNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIG 96
S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA +
Sbjct: 201 SDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAK 257
Query: 97 LPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQAPNNNNNNIVNNNNNSSDG 151
L EAR+QVWFSNRRA+WR++ N G PT P + S
Sbjct: 258 LTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQL------SETS 311
Query: 152 CTPSPAPQVSMDPTD 166
P+ PQ DP+
Sbjct: 312 YQPTSIPQAVSDPSS 326
>gi|324519356|gb|ADY47358.1| Retinal homeobox protein Rx [Ascaris suum]
Length = 250
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%)
Query: 42 NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
+++PE + R R +K +RNRT+FT Q+ LE+ FE+ HYPDV+ARE LA K+ LPE R
Sbjct: 76 HVQPEPTKRRDRDSKKQRRNRTTFTTFQLHELEQAFEKCHYPDVYARELLAQKVKLPEVR 135
Query: 102 IQVWFSNRRAKWRREEK 118
+QVWF NRRAKWRR++K
Sbjct: 136 VQVWFQNRRAKWRRQDK 152
>gi|339253634|ref|XP_003372040.1| retinal homeobox protein Rax [Trichinella spiralis]
gi|316967607|gb|EFV52015.1| retinal homeobox protein Rax [Trichinella spiralis]
Length = 266
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K++RNRT+FT Q+ LE+ FE++HYPDV+ RE LA KI LPE R+QVWF NRRAKWRR+
Sbjct: 81 KIRRNRTTFTTFQLHELERAFEKSHYPDVYTREALALKINLPEIRVQVWFQNRRAKWRRQ 140
Query: 117 EK--LRNQRQRGSADPTQA 133
EK LR Q + P A
Sbjct: 141 EKMELRCQEELPPIPPKPA 159
>gi|405969514|gb|EKC34482.1| Aristaless-related homeobox protein [Crassostrea gigas]
Length = 376
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ Q+ LEK F +THYPDVF RE+LA+KI LPE+RIQVWF NRRAKWR+
Sbjct: 100 KSKRNRTTFSTKQLQELEKVFRKTHYPDVFLREKLASKIKLPESRIQVWFQNRRAKWRKR 159
Query: 117 EKL 119
EKL
Sbjct: 160 EKL 162
>gi|410908863|ref|XP_003967910.1| PREDICTED: aristaless-related homeobox protein-like [Takifugu
rubripes]
Length = 463
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G ++ G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 200 GEDSVCLSAGSDTEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 247
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 248 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQ 285
>gi|148231303|ref|NP_001088993.1| paired box protein Pax-3-A [Xenopus laevis]
gi|82198154|sp|Q645N4.1|PAX3A_XENLA RecName: Full=Paired box protein Pax-3-A; Short=xPax3-A; AltName:
Full=Paired-domain transcription factor Pax3-A
gi|52082694|gb|AAU25940.1| paired-domain transcription factor Pax3 [Xenopus laevis]
Length = 484
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+ S GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA
Sbjct: 198 VSPESEEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 254
Query: 93 AKIGLPEARIQVWFSNRRAKWRRE 116
+ L EAR+QVWFSNRRA+WR++
Sbjct: 255 QRAKLTEARVQVWFSNRRARWRKQ 278
>gi|432866185|ref|XP_004070727.1| PREDICTED: homeobox protein aristaless-like 3-like [Oryzias
latipes]
Length = 369
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 6/102 (5%)
Query: 19 IELDGLGSDETCTTIGDNSNPGSNLEPED--DQARLRLKRKLQRNRTSFTNDQIDNLEKE 76
+ GLG+D G PGS+L+ + D L K K +RNRT+F+ Q++ LEK
Sbjct: 133 MGFPGLGTD----CCGKLKEPGSSLQGDSIADSIDLSGKNKKRRNRTTFSTFQLEELEKV 188
Query: 77 FERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR+ E+
Sbjct: 189 FQKTHYPDVYAREQLALRTELTEARVQVWFQNRRAKWRKRER 230
>gi|24663288|ref|NP_524041.2| twin of eyg, isoform A [Drosophila melanogaster]
gi|17861690|gb|AAL39322.1| GH22493p [Drosophila melanogaster]
gi|23093606|gb|AAF49919.2| twin of eyg, isoform A [Drosophila melanogaster]
gi|220945522|gb|ACL85304.1| toe-PA [synthetic construct]
gi|220952758|gb|ACL88922.1| toe-PA [synthetic construct]
Length = 640
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 65/84 (77%)
Query: 42 NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
++E ED +++ + K +RNRT+F+ +Q+D LEKEF+++HYP V RE+LAA+ L EAR
Sbjct: 368 DIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEAR 427
Query: 102 IQVWFSNRRAKWRREEKLRNQRQR 125
+QVWFSNRRAKWRR +++ +QR
Sbjct: 428 VQVWFSNRRAKWRRHQRVNLIKQR 451
>gi|301782575|ref|XP_002926705.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Ailuropoda melanoleuca]
Length = 459
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 264 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 311
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 312 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 349
>gi|51869697|emb|CAH04385.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 16/140 (11%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA +
Sbjct: 209 DKDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 265
Query: 96 GLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNNNIV 142
L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 266 KLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTT 325
Query: 143 NNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 326 LSQDGSSTLHRPQPLPPSSM 345
>gi|351700009|gb|EHB02928.1| Dorsal root ganglia homeobox protein [Heterocephalus glaber]
Length = 443
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 35 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 94
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 95 RKTERGASDQEPGAKEP 111
>gi|195489908|ref|XP_002092937.1| GE14464 [Drosophila yakuba]
gi|194179038|gb|EDW92649.1| GE14464 [Drosophila yakuba]
Length = 427
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 76/125 (60%), Gaps = 23/125 (18%)
Query: 44 EPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARI 102
E EDD + ++LKRK +R+RT+F+NDQID LE+ F RT YPDV+ RE LA GL EAR+
Sbjct: 170 ESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARV 229
Query: 103 QVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTP----SPAP 158
QVWFSNRRA+ R++ N +Q S PT ++S G TP +PAP
Sbjct: 230 QVWFSNRRARLRKQ---LNTQQVPSFAPT---------------STSYGATPTTSAAPAP 271
Query: 159 QVSMD 163
+ M
Sbjct: 272 SMGMS 276
>gi|89272731|emb|CAJ82363.1| paired box protein 3 [Xenopus (Silurana) tropicalis]
Length = 462
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 182 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 238
Query: 100 ARIQVWFSNRRAKWRRE 116
AR+QVWFSNRRA+WR++
Sbjct: 239 ARVQVWFSNRRARWRKQ 255
>gi|254281208|ref|NP_001006776.2| paired box protein Pax-3 [Xenopus (Silurana) tropicalis]
gi|224493169|sp|Q28DP6.2|PAX3_XENTR RecName: Full=Paired box protein Pax-3; AltName: Full=Paired-domain
transcription factor Pax3
Length = 461
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 181 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 237
Query: 100 ARIQVWFSNRRAKWRRE 116
AR+QVWFSNRRA+WR++
Sbjct: 238 ARVQVWFSNRRARWRKQ 254
>gi|109726691|gb|ABG45802.1| paired box protein Pax-3-like protein [Bos taurus]
Length = 195
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L E
Sbjct: 8 GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 64
Query: 100 ARIQVWFSNRRAKWRRE 116
AR+QVWFSNRRA+WR++
Sbjct: 65 ARVQVWFSNRRARWRKQ 81
>gi|332258274|ref|XP_003278225.1| PREDICTED: dorsal root ganglia homeobox protein [Nomascus
leucogenys]
Length = 268
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 93
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 94 RKTERGASDQEPGAKEP 110
>gi|297686443|ref|XP_002820758.1| PREDICTED: dorsal root ganglia homeobox protein [Pongo abelii]
Length = 268
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 4/91 (4%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 93
Query: 114 RREEKLRNQRQRGSADP----TQAPNNNNNN 140
R+ E+ + ++ G+ +P T P N N+
Sbjct: 94 RKTERGASDQEPGAKEPMAEVTSPPVRNINS 124
>gi|189240302|ref|XP_001813949.1| PREDICTED: similar to CG34340 CG34340-PD [Tribolium castaneum]
Length = 283
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 74/127 (58%), Gaps = 8/127 (6%)
Query: 4 LEKPLETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRT 63
LE P + L+G + +C + +P + DD ++RK +RNRT
Sbjct: 22 LEYPFTPTHPYVSRSSYLEGNKTGGSCADTSYSYHPAIH----DDTF---VRRKQRRNRT 74
Query: 64 SFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-NQ 122
+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKWR+ E+L+ Q
Sbjct: 75 TFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKEEQ 134
Query: 123 RQRGSAD 129
R+R D
Sbjct: 135 RKRDGQD 141
>gi|355562412|gb|EHH19006.1| hypothetical protein EGK_19626 [Macaca mulatta]
Length = 268
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 93
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 94 RKTERGASDQEPGAKEP 110
>gi|383854569|ref|XP_003702793.1| PREDICTED: paired mesoderm homeobox protein 2-like [Megachile
rotundata]
Length = 250
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 38 NPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGL 97
+PGS ED Q+ KRK +R RT+FTN Q++ LE+ F++THYPDVF RE LA +I L
Sbjct: 78 SPGS----EDRQSSGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQL 133
Query: 98 PEARIQVWFSNRRAKWRREEK 118
EAR+QVWF NRRAKWR++EK
Sbjct: 134 TEARVQVWFQNRRAKWRKQEK 154
>gi|302564109|ref|NP_001181527.1| dorsal root ganglia homeobox protein [Macaca mulatta]
gi|402880151|ref|XP_003903676.1| PREDICTED: dorsal root ganglia homeobox protein [Papio anubis]
gi|355782761|gb|EHH64682.1| hypothetical protein EGM_17968 [Macaca fascicularis]
Length = 268
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 93
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 94 RKTERGASDQEPGAKEP 110
>gi|340724400|ref|XP_003400570.1| PREDICTED: hypothetical protein LOC100651262 [Bombus terrestris]
gi|350397686|ref|XP_003484956.1| PREDICTED: hypothetical protein LOC100748675 [Bombus impatiens]
Length = 251
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 38 NPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGL 97
+PGS ED Q+ KRK +R RT+FTN Q++ LE+ F++THYPDVF RE LA +I L
Sbjct: 78 SPGS----EDRQSTGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQL 133
Query: 98 PEARIQVWFSNRRAKWRREEK 118
EAR+QVWF NRRAKWR++EK
Sbjct: 134 TEARVQVWFQNRRAKWRKQEK 154
>gi|291231892|ref|XP_002735897.1| PREDICTED: aristaless homeodomain transcription factor-like
[Saccoglossus kowalevskii]
Length = 236
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
Query: 17 DKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKE 76
DK+E D + S + D + G+ D + KRK +RNRT+FT+ Q+D +EK
Sbjct: 68 DKLEQDEVDSKGDLISDQDENKEGTEQSDTSDSS----KRKKRRNRTTFTSFQLDEMEKV 123
Query: 77 FERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
F+RTHYPDV++RE+LA + L EAR+QVWF NRRAKWR+ E+
Sbjct: 124 FQRTHYPDVYSREQLALRCDLTEARVQVWFQNRRAKWRKRERF 166
>gi|426364705|ref|XP_004049438.1| PREDICTED: dorsal root ganglia homeobox protein [Gorilla gorilla
gorilla]
Length = 268
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 93
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 94 RKTERGASDQEPGAKEP 110
>gi|381216184|gb|AFF61352.1| paired box protein 7 beta variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 98.2 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 16/140 (11%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA +
Sbjct: 209 DKDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 265
Query: 96 GLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNNNIV 142
L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 266 KLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTT 325
Query: 143 NNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 326 LSQDGSSTLHRPQPLPPSSM 345
>gi|296220129|ref|XP_002756185.1| PREDICTED: dorsal root ganglia homeobox protein [Callithrix
jacchus]
Length = 282
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 48 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 107
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 108 RKTERGASDQEPGAKEP 124
>gi|432905591|ref|XP_004077452.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oryzias
latipes]
Length = 308
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 7/77 (9%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 38 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 97
Query: 114 RREEKLRNQRQRGSADP 130
R+ E RGS+DP
Sbjct: 98 RKTE-------RGSSDP 107
>gi|388240434|dbj|BAM15711.1| paired box gene 7 [Scyliorhinus torazame]
Length = 495
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 60/76 (78%), Gaps = 3/76 (3%)
Query: 41 SNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEA 100
S++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L EA
Sbjct: 202 SDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
Query: 101 RIQVWFSNRRAKWRRE 116
R+QVWFSNRRA+WR++
Sbjct: 259 RVQVWFSNRRARWRKQ 274
>gi|114635169|ref|XP_001138723.1| PREDICTED: dorsal root ganglia homeobox protein [Pan troglodytes]
Length = 268
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 93
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 94 RKTERGASDQEPGAKEP 110
>gi|9967884|emb|CAC06429.1| homeobrain protein [Drosophila melanogaster]
Length = 409
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 151 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 210
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 211 REKFMNQDKAGYLLPEQG 228
>gi|195456007|ref|XP_002074962.1| GK22873 [Drosophila willistoni]
gi|194171047|gb|EDW85948.1| GK22873 [Drosophila willistoni]
Length = 395
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 139 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 198
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 199 REKFMNQDKAGYLLPDQG 216
>gi|407025361|gb|AFS65547.1| Alx1, partial [Parastichopus parvimensis]
Length = 311
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +RNRT+FT+ Q++ +EK F+RTHYPDV+ RE+LA + L EAR+QVWF NRRAKWR
Sbjct: 107 KRKKRRNRTTFTSFQLEEMEKVFQRTHYPDVYMREQLALRCDLTEARVQVWFQNRRAKWR 166
Query: 115 REEKLRN-QRQRGSADP 130
+ E+ + Q RG A P
Sbjct: 167 KRERFQQMQTMRGLAPP 183
>gi|3021450|emb|CAA75668.1| prdl-a [Hydra vulgaris]
Length = 229
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KR +R RT+FT Q+D LE+ F++THYPDVF RE LA ++ L EAR+QVWF NRRAKWR
Sbjct: 37 KRNERRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQVWFQNRRAKWR 96
Query: 115 REEKLR---NQRQRGSADPTQAPNN 136
+ EKL +Q+Q GS +P +
Sbjct: 97 KREKLSYNVHQQQHGSNGEVSSPYH 121
>gi|195153954|ref|XP_002017888.1| GL17416 [Drosophila persimilis]
gi|194113684|gb|EDW35727.1| GL17416 [Drosophila persimilis]
Length = 401
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 140 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 199
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 200 REKFMNQDKAGYLLPEQG 217
>gi|397475296|ref|XP_003809079.1| PREDICTED: dorsal root ganglia homeobox protein [Pan paniscus]
Length = 265
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 31 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 90
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 91 RKTERGASDQEPGAKEP 107
>gi|344274342|ref|XP_003408976.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Loxodonta africana]
Length = 268
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 93
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 94 RKTERGASDQESGAKEP 110
>gi|47228289|emb|CAG07684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ +GD S+ + D + L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 145 KHSIDGI--------LGDRSSHSDDTSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAF 196
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE +A + L EAR+QVWFSNRRA+WR++
Sbjct: 197 ERTHYPDIYTREEVAQRAKLTEARVQVWFSNRRARWRKQ 235
>gi|194753688|ref|XP_001959142.1| GF12736 [Drosophila ananassae]
gi|190620440|gb|EDV35964.1| GF12736 [Drosophila ananassae]
Length = 410
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 59/86 (68%)
Query: 48 DQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFS 107
D + + RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF
Sbjct: 134 DLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQ 193
Query: 108 NRRAKWRREEKLRNQRQRGSADPTQA 133
NRRAKWR+ EK NQ + G P Q
Sbjct: 194 NRRAKWRKREKFMNQDKAGYLLPDQG 219
>gi|28573684|ref|NP_788420.1| homeobrain [Drosophila melanogaster]
gi|28380639|gb|AAF46642.3| homeobrain [Drosophila melanogaster]
gi|66571176|gb|AAY51553.1| IP01393p [Drosophila melanogaster]
gi|220943354|gb|ACL84220.1| hbn-PA [synthetic construct]
gi|220953324|gb|ACL89205.1| hbn-PA [synthetic construct]
Length = 409
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 151 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 210
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 211 REKFMNQDKAGYLLPEQG 228
>gi|195429318|ref|XP_002062710.1| GK19597 [Drosophila willistoni]
gi|194158795|gb|EDW73696.1| GK19597 [Drosophila willistoni]
Length = 288
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 9 ETKRFNTTDKIEL--DGLGSDETCTTIGDNSNPGSNLEPEDDQ---ARLRLKRKLQRNRT 63
+ RF+ + IEL D G + + +N GS + D RK +RNRT
Sbjct: 59 KMHRFSVDNLIELKHDAYGKGKMSMELNNNYGVGSGIGGATDYPNNLSTGHSRKPRRNRT 118
Query: 64 SFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
+F++ Q+ LEK FERTHYPD F RE LA K+ L EAR+QVWF NRRAK+RR E+
Sbjct: 119 TFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER 173
>gi|317373355|sp|Q8BYH0.2|DRGX_MOUSE RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|188036459|gb|ACD45984.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 263
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|345792953|ref|XP_848719.2| PREDICTED: dorsal root ganglia homeobox protein [Canis lupus
familiaris]
Length = 287
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 53 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 112
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 113 RKTERGASDQEPGAKEP 129
>gi|198458250|ref|XP_001360969.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
gi|198136274|gb|EAL25545.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
Length = 404
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 143 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 202
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 203 REKFMNQDKAGYLLPEQG 220
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 24 LGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYP 83
LG+ C ++S P S L D +RK +RNRT+FT Q++ LE F +THYP
Sbjct: 21 LGNSNVCPHACEDS-PYSELTYGGDLDETFARRKQRRNRTTFTVQQLEELESAFAKTHYP 79
Query: 84 DVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
DVF RE LA +I L EAR+QVWF NRRAKWR+ E+ + R S T +P N++
Sbjct: 80 DVFTREDLALRINLTEARVQVWFQNRRAKWRKAERTKQDRGPSS---TSSPENDD 131
>gi|449784876|ref|NP_001263380.1| dorsal root ganglia homeobox protein [Homo sapiens]
gi|158513808|sp|A6NNA5.1|DRGX_HUMAN RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Paired-related homeobox protein-like 1
gi|119613506|gb|EAW93100.1| hCG32744 [Homo sapiens]
gi|261861218|dbj|BAI47131.1| dorsal root ganglia homeobox [synthetic construct]
Length = 263
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|195585242|ref|XP_002082398.1| GD25243 [Drosophila simulans]
gi|194194407|gb|EDX07983.1| GD25243 [Drosophila simulans]
Length = 411
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 153 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 212
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 213 REKFMNQDKAGYLLPEQG 230
>gi|291404049|ref|XP_002718385.1| PREDICTED: paired related homeobox protein-like 1-like [Oryctolagus
cuniculus]
Length = 269
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 35 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 94
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 95 RKTERGASDQEPGAKEP 111
>gi|348560754|ref|XP_003466178.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cavia
porcellus]
Length = 263
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGTSDQEPGAKEP 105
>gi|189236734|ref|XP_001815189.1| PREDICTED: similar to paired box protein [Tribolium castaneum]
Length = 268
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 52 LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRA 111
L KRK +R RT+FT+ Q+ LE+ F+ THYPD++ RE +A KI L EAR+QVWF NRRA
Sbjct: 37 LTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQNRRA 96
Query: 112 KWRREEKLRNQR----QRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVSMDP 164
K+R++E+L Q+ S PT +N N ++ N S D SP +S P
Sbjct: 97 KFRKQERLAQQKASNNSENSTPPTSIKAESNGNTKSSLNGSKDIKPGSPHSSISTTP 153
>gi|403276711|ref|XP_003930032.1| PREDICTED: dorsal root ganglia homeobox protein [Saimiri
boliviensis boliviensis]
Length = 268
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 93
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 94 RKTERGASDQEPGAKEP 110
>gi|256017083|dbj|BAH97320.1| aristaless-like homeobox protein [Hemicentrotus pulcherrimus]
Length = 381
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 14/137 (10%)
Query: 4 LEKPLETKRFNTTDKIELDGLGSD-ETCTTIGDNSNPGSNLEPEDD------------QA 50
L+ PL + +T+ L G+ S N+N G+N + DD +
Sbjct: 30 LDSPLTDRSMDTSTPGLLGGVSSGIHKSEQDSTNNNAGANGKGNDDVKSPMGDSKDDDKN 89
Query: 51 RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRR 110
KRK +RNRT+FT+ Q++ +EK F+RTHYPDV+ RE+LA + L EAR+QVWF NRR
Sbjct: 90 DSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNRR 149
Query: 111 AKWRREEKLRN-QRQRG 126
AKWR+ E+ + Q RG
Sbjct: 150 AKWRKRERFQQFQNMRG 166
>gi|149034142|gb|EDL88912.1| paired related homeobox protein-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 263
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 235 VRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 294
Query: 114 RREEKLR-NQRQR------GSADPTQ-APNNNNNNIVNNNNNSSDGCTPSPAP 158
R+ E+L+ QR+R G+ + T AP +++ + + +G T S AP
Sbjct: 295 RKSERLKEEQRKREGNGGGGALETTGLAPPTSSSAGPSPTGHDPEGTTSSSAP 347
>gi|194881732|ref|XP_001974975.1| GG20821 [Drosophila erecta]
gi|190658162|gb|EDV55375.1| GG20821 [Drosophila erecta]
Length = 416
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 158 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 217
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 218 REKFMNQDKAGYLLPEQG 235
>gi|47224480|emb|CAG08730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 74/135 (54%), Gaps = 8/135 (5%)
Query: 39 PGSNL-EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGL 97
PGS L P D K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L
Sbjct: 35 PGSELPSPLDKTEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDL 94
Query: 98 PEARIQVWFSNRRAKWRREEK------LRNQRQRGSADPTQAPNNNNNNIVNNN-NNSSD 150
EAR+QVWF NRRAKWR+ E+ +R P N I N SS
Sbjct: 95 TEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPILTRPENYAQIQNPTWIGSSS 154
Query: 151 GCTPSPAPQVSMDPT 165
G +P P V DP
Sbjct: 155 GASPVPGCVVPCDPV 169
>gi|47229844|emb|CAG07040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 591
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/83 (55%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ + GS+++ E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA
Sbjct: 235 GNRIDDGSDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 291
Query: 94 KIGLPEARIQVWFSNRRAKWRRE 116
+ L EAR+QVWFSNRRA+WR++
Sbjct: 292 RTKLTEARVQVWFSNRRARWRKQ 314
>gi|340369432|ref|XP_003383252.1| PREDICTED: hypothetical protein LOC100635424 [Amphimedon
queenslandica]
Length = 337
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 9/109 (8%)
Query: 52 LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRA 111
L LK+K +R RT+FT+ Q+ LEK FERTHYPDVF RE LA ++ L EAR+QVWF NRRA
Sbjct: 77 LLLKKK-RRYRTTFTSFQLRELEKAFERTHYPDVFTREDLANRVELTEARVQVWFQNRRA 135
Query: 112 KWRREEKLRNQRQRGSADPTQAPNNNNNN---IVNNNNNSSDGCTPSPA 157
KWR++EK Q+G PT P + +++++ S+ T +P+
Sbjct: 136 KWRKKEK-----QQGLPSPTAQPIAATSTPPALISSHETSTRVITLNPS 179
>gi|195486706|ref|XP_002091619.1| GE13762 [Drosophila yakuba]
gi|194177720|gb|EDW91331.1| GE13762 [Drosophila yakuba]
Length = 412
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 154 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 213
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 214 REKFMNQDKAGYLLPEQG 231
>gi|26377023|dbj|BAB28278.2| unnamed protein product [Mus musculus]
Length = 488
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 17/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LKRK + +RT+FT +Q++ LE+ F
Sbjct: 189 KHSIDGILSERAS---APQSDEGSDIDSEPD---LPLKRKQRGSRTTFTAEQLEELERAF 242
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPTQ 132
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 243 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTA 302
Query: 133 APNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPTD 166
P + S P+ PQ DP+
Sbjct: 303 MPTLPTYQL------SETSYQPTSIPQAVSDPSS 330
>gi|395858717|ref|XP_003801706.1| PREDICTED: dorsal root ganglia homeobox protein [Otolemur
garnettii]
Length = 263
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|195346245|ref|XP_002039676.1| GM15768 [Drosophila sechellia]
gi|194135025|gb|EDW56541.1| GM15768 [Drosophila sechellia]
Length = 407
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 149 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 208
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 209 REKFMNQDKAGYLLPEQG 226
>gi|195119468|ref|XP_002004253.1| GI19825 [Drosophila mojavensis]
gi|193909321|gb|EDW08188.1| GI19825 [Drosophila mojavensis]
Length = 411
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 162 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 221
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 222 REKFMNQDKAGYLLPDQG 239
>gi|195148028|ref|XP_002014976.1| GL18665 [Drosophila persimilis]
gi|194106929|gb|EDW28972.1| GL18665 [Drosophila persimilis]
Length = 370
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 107
Query: 114 RREEKLRN-QRQR 125
R+ E+L++ QR+R
Sbjct: 108 RKAERLKDEQRKR 120
>gi|440902039|gb|ELR52885.1| Dorsal root ganglia homeobox protein, partial [Bos grunniens mutus]
Length = 257
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 23 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 82
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 83 RKTERGASDQEPGAKEP 99
>gi|195029473|ref|XP_001987597.1| GH19875 [Drosophila grimshawi]
gi|193903597|gb|EDW02464.1| GH19875 [Drosophila grimshawi]
Length = 395
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 148 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 207
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 208 REKFMNQDKAGYLLPDQG 225
>gi|348514896|ref|XP_003444976.1| PREDICTED: hypothetical protein LOC100711376 [Oreochromis
niloticus]
Length = 556
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 14 NTTDKIELDGLGSDETCTTIGDNSNPGSNLEPED--DQARLRLKRKLQRNRTSFTNDQID 71
T + G+G+D G PGS L+ + D L K K +RNRT+F+ Q++
Sbjct: 311 GTPKTMGYPGIGTD----CCGKLKEPGSGLQGDSIADSIDLSGKNKKRRNRTTFSTFQLE 366
Query: 72 NLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR+ E+
Sbjct: 367 ELEKVFQKTHYPDVYAREQLALRTELTEARVQVWFQNRRAKWRKRER 413
>gi|242009008|ref|XP_002425285.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212509050|gb|EEB12547.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 513
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 58/76 (76%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 46 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 105
Query: 114 RREEKLRNQRQRGSAD 129
R+ E+L+ ++++ D
Sbjct: 106 RKAERLKEEQRKRDGD 121
>gi|426256164|ref|XP_004021711.1| PREDICTED: dorsal root ganglia homeobox protein [Ovis aries]
Length = 305
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|195401625|ref|XP_002059413.1| GJ18584 [Drosophila virilis]
gi|194142419|gb|EDW58825.1| GJ18584 [Drosophila virilis]
Length = 405
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK++R+RT+FT Q+ LE+ FE+T YPDVF RE LA ++ L EAR+QVWF NRRAKWR+
Sbjct: 153 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRK 212
Query: 116 EEKLRNQRQRGSADPTQA 133
EK NQ + G P Q
Sbjct: 213 REKFMNQDKAGYLLPDQG 230
>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
Length = 470
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 13/108 (12%)
Query: 9 ETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTND 68
E KR ++ D I LG C G++S+ D + L LKRK +R+RT+FT +
Sbjct: 158 EKKRSHSIDGI----LGEKGGCR--GEDSDC-------DSEPDLPLKRKQRRSRTTFTPE 204
Query: 69 QIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
Q++ LEK FERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 205 QLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 252
>gi|108735476|gb|ABG00197.1| Alx1 [Paracentrotus lividus]
Length = 519
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 105
+DD+ KRK +RNRT+FT+ Q++ +EK F+RTHYPDV+ RE+LA + L EAR+QVW
Sbjct: 188 DDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVW 247
Query: 106 FSNRRAKWRREEKLRN-QRQRG 126
F NRRAKWR+ E+ + Q RG
Sbjct: 248 FQNRRAKWRKRERFQQFQNMRG 269
>gi|149034141|gb|EDL88911.1| paired related homeobox protein-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 253
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|307211957|gb|EFN87869.1| Dorsal root ganglia homeobox protein [Harpegnathos saltator]
Length = 356
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 19 VRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 78
Query: 114 RREEKLR-NQRQR 125
R+ E+L+ QR+R
Sbjct: 79 RKSERLKEEQRKR 91
>gi|195124303|ref|XP_002006633.1| GI21167 [Drosophila mojavensis]
gi|193911701|gb|EDW10568.1| GI21167 [Drosophila mojavensis]
Length = 437
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 40 GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
GS E EDD + ++LKRK +R+RT+F+NDQID LE+ F RT YPDV+ RE LA GL
Sbjct: 172 GSEDESEDDTEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLT 231
Query: 99 EARIQVWFSNRRAKWRRE 116
EAR+QVWFSNRRA+ R++
Sbjct: 232 EARVQVWFSNRRARLRKQ 249
>gi|431922297|gb|ELK19388.1| Retina and anterior neural fold homeobox protein 2 [Pteropus
alecto]
Length = 184
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K+K +RNRT+F+ Q+ LE+ FE +HYPD+++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKKHRRNRTTFSTYQLHQLERAFEASHYPDIYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|297491619|ref|XP_002699015.1| PREDICTED: dorsal root ganglia homeobox protein [Bos taurus]
gi|296472028|tpg|DAA14143.1| TPA: paired related homeobox protein-like 1-like [Bos taurus]
Length = 263
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|348512783|ref|XP_003443922.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 368
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 34 GDNSNPGSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
G + PGS+L P + K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA
Sbjct: 149 GQSERPGSDLSSPLEKSEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 208
Query: 93 AKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
+ L EAR+QVWF NRRAKWR+ E+ +Q
Sbjct: 209 LRTDLTEARVQVWFQNRRAKWRKRERFGQMQQ 240
>gi|410975579|ref|XP_003994208.1| PREDICTED: dorsal root ganglia homeobox protein [Felis catus]
Length = 263
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|395815567|ref|XP_003781297.1| PREDICTED: homeobox protein aristaless-like 4 [Otolemur garnettii]
Length = 407
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 7/118 (5%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 268
Query: 115 REEKLRNQRQ------RGSADPTQAPNNNNNNIVNNNNNSSDG-CTPSPAPQVSMDPT 165
+ E+ +Q P A N I N + S++G +P PA V DP
Sbjct: 269 KRERFGQMQQVRTHFSTAYELPLLARAENYAQIQNPSWISNNGAASPVPACVVPCDPV 326
>gi|301776410|ref|XP_002923607.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Ailuropoda melanoleuca]
gi|281337977|gb|EFB13561.1| hypothetical protein PANDA_012800 [Ailuropoda melanoleuca]
Length = 184
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K++ +RNRT+FT Q+ LE+ FE +HYPDV++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 KKQHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
R+E+L +
Sbjct: 84 RQERLES 90
>gi|270011563|gb|EFA08011.1| hypothetical protein TcasGA2_TC005600 [Tribolium castaneum]
Length = 327
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 47 VRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 106
Query: 114 RREEKLR-NQRQRGSAD 129
R+ E+L+ QR+R D
Sbjct: 107 RKAERLKEEQRKRDGQD 123
>gi|148692895|gb|EDL24842.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 295
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 71 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 130
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 131 RKTERGASDQEPGAKEP 147
>gi|281346213|gb|EFB21797.1| hypothetical protein PANDA_016919 [Ailuropoda melanoleuca]
Length = 252
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 18 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 77
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 78 RKTERGASDQEPGAKEP 94
>gi|432857453|ref|XP_004068688.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oryzias
latipes]
Length = 508
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+GD N + D + L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA
Sbjct: 196 LGDKCNRTDDGSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELA 255
Query: 93 AKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNN 139
+ L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 256 QRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTLPTYQLPESSYP 315
Query: 140 NIVNNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 316 STTLSQEGSSTLHRPQPLPPSSM 338
>gi|53125929|emb|CAG25521.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/140 (42%), Positives = 79/140 (56%), Gaps = 16/140 (11%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
+ + GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA +
Sbjct: 205 DKDEGSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 261
Query: 96 GLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNNNIV 142
L EAR+QVWFSNRRA+WR++ N G PT Q P +
Sbjct: 262 KLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPECSYPGTT 321
Query: 143 NNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 322 LSQDGSSTLHRPQPLPPSSM 341
>gi|354465789|ref|XP_003495359.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cricetulus
griseus]
Length = 263
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|284005045|ref|NP_001164685.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
gi|283462198|gb|ADB22393.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
Length = 256
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
Query: 17 DKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKE 76
DK+E D + S + D + G+ D + KRK +RNRT+FT+ Q+D +EK
Sbjct: 68 DKLEQDEVDSKGDLISDQDENKEGTEQSDTSDSS----KRKKRRNRTTFTSFQLDEMEKV 123
Query: 77 FERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
F+RTHYPDV++RE+LA + L EAR+QVWF NRRAKWR+ E+
Sbjct: 124 FQRTHYPDVYSREQLALRCDLTEARVQVWFQNRRAKWRKRERF 166
>gi|357611334|gb|EHJ67427.1| hypothetical protein KGM_16069 [Danaus plexippus]
Length = 432
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 150 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLALKINLTEARVQVWFQNRRAKW 209
Query: 114 RREEKLR-NQRQRGSAD 129
R+ E+L+ QR+R A+
Sbjct: 210 RKAERLKEEQRKREGAE 226
>gi|301783499|ref|XP_002927160.1| PREDICTED: dorsal root ganglia homeobox protein-like [Ailuropoda
melanoleuca]
Length = 263
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|195380555|ref|XP_002049036.1| GJ20984 [Drosophila virilis]
gi|194143833|gb|EDW60229.1| GJ20984 [Drosophila virilis]
Length = 288
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Query: 9 ETKRFNTTDKIEL--DGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFT 66
+ RF+ + IEL D G + + +N G+ P + + RK +RNRT+F+
Sbjct: 85 KMHRFSVDNLIELKQDAFGKSKLTMELSNNFGSGAVDYPNNLSSGH--SRKPRRNRTTFS 142
Query: 67 NDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
+ Q+ LEK FERTHYPD F RE LA K+ L EAR+QVWF NRRAK+RR E+
Sbjct: 143 SAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNER 194
>gi|51869701|emb|CAH04387.1| paired box protein 7 [Salmo salar]
Length = 502
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 77/136 (56%), Gaps = 16/136 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS++E E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L E
Sbjct: 201 GSDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTE 257
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGSADPT--------QAPNNNNNNIVNNNN 146
AR+QV FSNRRA+WR++ N G PT Q P ++ + +
Sbjct: 258 ARVQVCFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQD 317
Query: 147 NSSDGCTPSPAPQVSM 162
SS P P P SM
Sbjct: 318 GSSTLHRPQPLPPSSM 333
>gi|313227120|emb|CBY22267.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 42 NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
N E E D++ +KRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L EAR
Sbjct: 221 NHEEELDESGQPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYTREELAQRTKLTEAR 280
Query: 102 IQVWFSNRRAKWRREEKLRNQRQRGSAD 129
+QVWFSNRRA+WR++ GSA
Sbjct: 281 VQVWFSNRRARWRKQVGAAQLPMPGSAS 308
>gi|195493835|ref|XP_002094583.1| GE20122 [Drosophila yakuba]
gi|194180684|gb|EDW94295.1| GE20122 [Drosophila yakuba]
Length = 642
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 68/90 (75%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
++N ++E ED +++ + K +RNRT+F+ +Q+D LEKEF+++HYP V RE+LAA+
Sbjct: 358 DANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAART 417
Query: 96 GLPEARIQVWFSNRRAKWRREEKLRNQRQR 125
L EAR+QVWFSNRRAKWRR +++ +QR
Sbjct: 418 ALSEARVQVWFSNRRAKWRRHQRVNLLKQR 447
>gi|170590608|ref|XP_001900064.1| Retinal homeobox protein Rx3 [Brugia malayi]
gi|158592696|gb|EDP31294.1| Retinal homeobox protein Rx3, putative [Brugia malayi]
Length = 185
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 17 DKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKE 76
D I + CT + +S + DD R KRK +RNRT+F Q++ LE
Sbjct: 40 DCINARKVYEQHCCTYLTPHSGGAA-----DD----RSKRKQRRNRTTFNQQQLNELEAA 90
Query: 77 FERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
F ++HYPDVFARE LA KI LPEAR+QVWF NRRAKWR+ E+
Sbjct: 91 FRKSHYPDVFAREELAVKINLPEARVQVWFQNRRAKWRKTER 132
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 12/97 (12%)
Query: 22 DGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTH 81
DGL D +C ++ DN + ++ +RNRT+FT Q+D LEK FERTH
Sbjct: 142 DGLLDDGSCGSLSDNGIISAK------------SKRQRRNRTTFTTAQLDALEKVFERTH 189
Query: 82 YPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
YPD F RE LA K+ L EAR+QVWF NRRAK+RR E+
Sbjct: 190 YPDAFLREELAKKVDLTEARVQVWFQNRRAKFRRNER 226
>gi|440808062|gb|AGC24174.1| Drgx [Lymnaea stagnalis]
Length = 416
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 24 LGSDETCTTIGDNSNPGSNLEPE-DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHY 82
L D C T S PG L + D+A R RK +RNRT+FT Q++ LEK F +THY
Sbjct: 17 LTLDYPCPT--HPSYPGYGLHADLHDEAFAR--RKQRRNRTTFTLQQLEELEKAFAQTHY 72
Query: 83 PDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
PDVF RE LA +I L EAR+QVWF NRRAKWR+ E+ +Q
Sbjct: 73 PDVFMREDLAMRINLTEARVQVWFQNRRAKWRKSERFSHQ 112
>gi|350593920|ref|XP_003359706.2| PREDICTED: paired box protein Pax-3-like, partial [Sus scrofa]
Length = 136
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
S+ GS+++ E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA +
Sbjct: 4 QSDEGSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRA 60
Query: 96 GLPEARIQVWFSNRRAKWRRE 116
L EAR+QVWFSNRRA+WR++
Sbjct: 61 KLTEARVQVWFSNRRARWRKQ 81
>gi|348534168|ref|XP_003454575.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oreochromis
niloticus]
Length = 518
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 19/158 (12%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D + G+ ++ S+++ E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 197 KHSIDGILGDRS---PGNRTDDASDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 250
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 251 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 310
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 311 MPTLPTYQLPESSYPSTTLSQEGSSTLHRPQPLPPSSM 348
>gi|402592915|gb|EJW86842.1| hypothetical protein WUBG_02247 [Wuchereria bancrofti]
Length = 184
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 17 DKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKE 76
D I CT + +S + DD R KRK +RNRT+F Q++ LE
Sbjct: 40 DCINARKFYEQHCCTYLTPHSGGAA-----DD----RSKRKQRRNRTTFNQQQLNELEAA 90
Query: 77 FERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
F ++HYPDVFARE LA KI LPEAR+QVWF NRRAKWR+ E+
Sbjct: 91 FRKSHYPDVFAREELATKINLPEARVQVWFQNRRAKWRKTER 132
>gi|405977363|gb|EKC41820.1| Paired box protein Pax-7 [Crassostrea gigas]
Length = 466
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 8/102 (7%)
Query: 16 TDKIELDGLGSDETCTTIGDNSNPGSNLEPE-DDQARLRLKRKLQRNRTSFTNDQIDNLE 74
+ K +DGL +D D S + E + D + L +KRK +R+RT+FT +Q++ LE
Sbjct: 197 SSKYSIDGLLAD-------DKSEKSEDEESDCDSEPGLSVKRKQRRSRTTFTAEQLEELE 249
Query: 75 KEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
+ FERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 250 RAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 291
>gi|194869841|ref|XP_001972532.1| GG13832 [Drosophila erecta]
gi|190654315|gb|EDV51558.1| GG13832 [Drosophila erecta]
Length = 643
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 68/90 (75%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
++N ++E ED +++ + K +RNRT+F+ +Q+D LEKEF+++HYP V RE+LAA+
Sbjct: 361 DANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAART 420
Query: 96 GLPEARIQVWFSNRRAKWRREEKLRNQRQR 125
L EAR+QVWFSNRRAKWRR +++ +QR
Sbjct: 421 ALSEARVQVWFSNRRAKWRRHQRVNLLKQR 450
>gi|345482144|ref|XP_001603519.2| PREDICTED: hypothetical protein LOC100119801 [Nasonia vitripennis]
Length = 461
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 92 VRRKQRRNRTTFTLQQLEELESAFVQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 151
Query: 114 RREEKLR-NQRQR-GSAD 129
R+ ++L+ QR+R GSA
Sbjct: 152 RKSQRLKEEQRKREGSAS 169
>gi|84874540|gb|ABC68267.1| transcription factor Pax3/7 [Capitella teleta]
Length = 416
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 55/65 (84%)
Query: 52 LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRA 111
L L RK +R+RT+F+ DQ+++LEK F+RTHYPD++ RE LA + GL EAR+QVWFSNRRA
Sbjct: 183 LSLSRKQRRSRTTFSADQLEHLEKAFDRTHYPDIYTREELAQRSGLTEARVQVWFSNRRA 242
Query: 112 KWRRE 116
+WR++
Sbjct: 243 RWRKQ 247
>gi|443734928|gb|ELU18784.1| hypothetical protein CAPTEDRAFT_147353, partial [Capitella teleta]
Length = 116
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 4/93 (4%)
Query: 30 CTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARE 89
C + D + +D AR RK +RNRT+FT Q++ LEK F +THYPDVF RE
Sbjct: 26 CFSCADTAYSLHQELQDDAFAR----RKQRRNRTTFTLQQLEELEKAFAQTHYPDVFTRE 81
Query: 90 RLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
LA +I L EAR+QVWF NRRAKWR+ E+ + Q
Sbjct: 82 ELAMRINLTEARVQVWFQNRRAKWRKSERFQQQ 114
>gi|7595811|gb|AAF64460.1|AF241310_1 transcription factor PaxB [Acropora millepora]
Length = 571
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/124 (45%), Positives = 78/124 (62%), Gaps = 9/124 (7%)
Query: 10 TKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQ 69
+KR ++ + E G S+E G + G+ P D LR + ++R RT+F+ +Q
Sbjct: 192 SKRKHSVESAESTGSHSEEE----GHDGQVGAG-SPTD----LRGHKIVRRQRTTFSGEQ 242
Query: 70 IDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSAD 129
I+ LEK FE+THYPDVF RE+LA + L EARIQVWFSNRRAKWR++EK+ +A
Sbjct: 243 IEQLEKTFEKTHYPDVFTREKLAQDVDLSEARIQVWFSNRRAKWRKQEKVPPLNSPTAAS 302
Query: 130 PTQA 133
P Q+
Sbjct: 303 PAQS 306
>gi|156401143|ref|XP_001639151.1| predicted protein [Nematostella vectensis]
gi|156226277|gb|EDO47088.1| predicted protein [Nematostella vectensis]
Length = 525
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 58/79 (73%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+ E D + + +R RT+FT++QI+ LEK FE+THYPDVF RE LA ++ L E
Sbjct: 208 GSHSGDEGDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVNLSE 267
Query: 100 ARIQVWFSNRRAKWRREEK 118
ARIQVW+SNRRAKWR+E K
Sbjct: 268 ARIQVWYSNRRAKWRKEGK 286
>gi|80751123|ref|NP_001032182.1| dorsal root ganglia homeobox protein [Danio rerio]
gi|58759849|gb|AAW81987.1| paired-like homeodomain transcription factor DRG11 [Danio rerio]
Length = 287
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 56/73 (76%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVFARE LA KI L EAR+QVWF NRRAKW
Sbjct: 38 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFAREELAMKINLTEARVQVWFQNRRAKW 97
Query: 114 RREEKLRNQRQRG 126
R+ E+ +++ G
Sbjct: 98 RKTERGTSEQDGG 110
>gi|170587125|ref|XP_001898329.1| Homeobox domain containing protein [Brugia malayi]
gi|158594235|gb|EDP32820.1| Homeobox domain containing protein [Brugia malayi]
Length = 516
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 5/74 (6%)
Query: 45 PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQV 104
PED+ KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA ++ L EAR+QV
Sbjct: 182 PEDNG-----KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQV 236
Query: 105 WFSNRRAKWRREEK 118
WF NRRAKWR++E+
Sbjct: 237 WFQNRRAKWRKQER 250
>gi|432857457|ref|XP_004068690.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oryzias
latipes]
Length = 511
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 17/143 (11%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+GD + GS+++ E D L LKRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA
Sbjct: 203 LGDKYD-GSDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELA 258
Query: 93 AKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT--------QAPNNNNN 139
+ L EAR+QVWFSNRRA+WR++ N G PT Q P ++
Sbjct: 259 QRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTLPTYQLPESSYP 318
Query: 140 NIVNNNNNSSDGCTPSPAPQVSM 162
+ + SS P P P SM
Sbjct: 319 STTLSQEGSSTLHRPQPLPPSSM 341
>gi|221113766|ref|XP_002168027.1| PREDICTED: homeobox protein DLX-1-like [Hydra magnipapillata]
Length = 318
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 15 TTDKIELD---GLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQID 71
T D LD L SDE T+ D Q L + K +R RT+FT Q+D
Sbjct: 111 TLDSPTLDNDGALTSDEVSPTVLDTYR----------QQALSMPSKKRRYRTTFTTHQLD 160
Query: 72 NLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
LE+ F RTHYPD+F RE +A K+GL EARIQVWF NRRAKWR+ K
Sbjct: 161 ELERVFNRTHYPDIFLREEMAVKLGLTEARIQVWFQNRRAKWRKRNK 207
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 12/110 (10%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 375 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 422
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAP 134
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q P++ P
Sbjct: 423 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQTPPPVGCPSRGP 472
>gi|435421|gb|AAA03628.1| PAX-3, partial [Homo sapiens]
Length = 332
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 18/154 (11%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK-E 76
K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +Q++ LE
Sbjct: 37 KHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELEHVA 90
Query: 77 FERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT 131
FERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 91 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPT 150
Query: 132 QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSMDPT 165
P + ++ P+ PQ DP+
Sbjct: 151 AMPTLPTYQLSEHSYQ------PTSIPQAVSDPS 178
>gi|41581185|emb|CAF02092.1| paired box protein 7 [Salmo salar]
Length = 501
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 77/135 (57%), Gaps = 15/135 (11%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
G ++E E D L LKRK +R+RT+FT +Q++ LEK FERT YPD++ RE LA + L E
Sbjct: 201 GLDVESEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTRYPDIYTREELAQRTKLTE 257
Query: 100 ARIQVWFSNRRAKWRREE-----KLRNQRQRGS-------ADPTQAPNNNNNNIVNNNNN 147
AR+QVWFSNRRA+WR++ N G + PTQ P ++ + +
Sbjct: 258 ARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPSLPTQLPESSYPGTTLSQDG 317
Query: 148 SSDGCTPSPAPQVSM 162
SS P P P SM
Sbjct: 318 SSTLHRPQPLPPSSM 332
>gi|307195645|gb|EFN77487.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 271
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 67/106 (63%)
Query: 13 FNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDN 72
+T L G S C + ++ E E+ + + KRK +R RT+F+N Q++
Sbjct: 51 LQSTALAGLIGAQSSSVCFPTKFTYDFSTSPESEERPSCVIGKRKQRRYRTTFSNFQLEE 110
Query: 73 LEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
LE+ F++THYPDVF RE LA +I L EAR+QVWF NRRAKWR++EK
Sbjct: 111 LERAFQKTHYPDVFFREELAVRIQLTEARVQVWFQNRRAKWRKQEK 156
>gi|225355244|gb|ACN88554.1| paired box protein 3b [Danio rerio]
Length = 286
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 6/86 (6%)
Query: 34 GDNSNP---GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
D S+P GS +E E D L KRK +R+RT+FT DQ++ LE+ FERTHYPD++ RE
Sbjct: 198 ADRSSPSDEGSEVESEPD---LPPKRKQRRSRTTFTADQLEELERAFERTHYPDIYTREE 254
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRRE 116
LA + L EAR+QVWFSNRRA+WR++
Sbjct: 255 LAQRAKLTEARVQVWFSNRRARWRKQ 280
>gi|219518636|gb|AAI71926.1| Prrxl1 protein [Mus musculus]
Length = 180
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|17569327|ref|NP_509860.1| Protein ALR-1 [Caenorhabditis elegans]
gi|3878964|emb|CAA92001.1| Protein ALR-1 [Caenorhabditis elegans]
Length = 362
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA ++ L EAR+QVWF NRRAK+R
Sbjct: 114 KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYR 173
Query: 115 REEKLRNQRQRGSADPTQAPNNNNNN 140
++E R+ P PN+N +N
Sbjct: 174 KQE--RSSTHHPYQAPMSIPNSNGDN 197
>gi|49169835|ref|NP_001001796.1| dorsal root ganglia homeobox protein [Mus musculus]
gi|26333375|dbj|BAC30405.1| unnamed protein product [Mus musculus]
gi|124376814|gb|AAI32614.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|148877678|gb|AAI45918.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|188036461|gb|ACD45985.1| paired related homeobox protein-like 1b [Mus musculus]
Length = 220
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|402594071|gb|EJW87998.1| hypothetical protein WUBG_01089, partial [Wuchereria bancrofti]
Length = 286
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 6/108 (5%)
Query: 31 TTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+ + D + SN PED+ KRK +R RT+F+ Q+D LEK F RTHYPDVF RE
Sbjct: 168 SAVSDRPSSCSN-SPEDNG-----KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREE 221
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNN 138
LA ++ L EAR+QVWF NRRAKWR++E+ G P ++
Sbjct: 222 LAQRVILTEARVQVWFQNRRAKWRKQERTSAVHPYGHTTSHHVPRTSH 269
>gi|211830229|gb|AAI28290.2| Isx protein [Mus musculus]
Length = 242
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 81/137 (59%), Gaps = 11/137 (8%)
Query: 39 PGSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGL 97
PGS LE P DQ + K K +R RT+FT +Q+ LEK F THYPD+ R +LA++I L
Sbjct: 59 PGSKLERPPQDQPQEEKKNK-RRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINL 117
Query: 98 PEARIQVWFSNRRAKWRREEK---LRNQRQRGSADPTQAPN--NNNNNIVNNNNNSSD-- 150
PEAR+Q+WF N+RAKWR++EK L +Q GS T + ++ ++ ++S+
Sbjct: 118 PEARVQIWFQNQRAKWRKQEKSGNLSAPQQPGSCADTHCYDYIGTSHRMLPTLSDSAPFK 177
Query: 151 --GCTPSPAPQVSMDPT 165
T SP P M PT
Sbjct: 178 LVPYTDSPCPMAPMGPT 194
>gi|348534166|ref|XP_003454574.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oreochromis
niloticus]
Length = 509
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 19/158 (12%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D + G+ ++ S+++ E D L LKRK +R+RT+FT +Q++ LEK F
Sbjct: 188 KHSIDGILGDRS---PGNRTDDASDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAF 241
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR-----NQRQRGSADPT- 131
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++ N G PT
Sbjct: 242 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTG 301
Query: 132 -------QAPNNNNNNIVNNNNNSSDGCTPSPAPQVSM 162
Q P ++ + + SS P P P SM
Sbjct: 302 MPTLPTYQLPESSYPSTTLSQEGSSTLHRPQPLPPSSM 339
>gi|393911231|gb|EJD76222.1| hypothetical protein LOAG_16789 [Loa loa]
Length = 242
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 53/68 (77%)
Query: 51 RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRR 110
R R +K +RNRT+FT Q+ LE+ FER HYPDV+ARE LA K+ LPE R+QVWF NRR
Sbjct: 65 RDRESKKQRRNRTTFTTFQLHELEQAFERCHYPDVYARELLAQKVKLPEVRVQVWFQNRR 124
Query: 111 AKWRREEK 118
AKWRR++K
Sbjct: 125 AKWRRQDK 132
>gi|170576749|ref|XP_001893749.1| Homeobox domain containing protein [Brugia malayi]
gi|158600048|gb|EDP37405.1| Homeobox domain containing protein [Brugia malayi]
Length = 224
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 53/68 (77%)
Query: 51 RLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRR 110
R R +K +RNRT+FT Q+ LE+ FER HYPDV+ARE LA K+ LPE R+QVWF NRR
Sbjct: 43 RDRESKKQRRNRTTFTTFQLHELEQAFERCHYPDVYARELLAQKVKLPEVRVQVWFQNRR 102
Query: 111 AKWRREEK 118
AKWRR++K
Sbjct: 103 AKWRRQDK 110
>gi|3021452|emb|CAA75669.1| prdl-b protein [Hydra vulgaris]
Length = 228
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 23 GLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHY 82
L SDE T+ D Q L + K +R RT+FT Q+D LE+ F RTHY
Sbjct: 122 ALTSDEVSPTVLDTYR----------QQALSMPSKKRRYRTTFTTHQLDELERVFNRTHY 171
Query: 83 PDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
PD+F RE +A K+GL EARIQVWF NRRAKWR+ K
Sbjct: 172 PDIFLREEMAVKLGLTEARIQVWFQNRRAKWRKRNK 207
>gi|17137502|ref|NP_477330.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|4972032|emb|CAB43867.1| Munster protein [Drosophila melanogaster]
gi|7296182|gb|AAF51474.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|94400518|gb|ABF17900.1| FI01102p [Drosophila melanogaster]
Length = 357
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 6 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 65
Query: 114 RREEKL 119
R++EK+
Sbjct: 66 RKQEKI 71
>gi|324511371|gb|ADY44739.1| Aristaless-related homeobox protein [Ascaris suum]
Length = 487
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA ++ L EAR+QVWF NRRAKWR
Sbjct: 170 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQVWFQNRRAKWR 229
Query: 115 REEKLRNQRQRGSADPTQAPNNNNNNIVNNN 145
++E+ + A Q +N++ +V+ N
Sbjct: 230 KQERTSSVHPYSHA--AQHVPHNSHPLVHAN 258
>gi|195388380|ref|XP_002052858.1| GJ17788 [Drosophila virilis]
gi|194149315|gb|EDW65013.1| GJ17788 [Drosophila virilis]
Length = 378
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKW 60
Query: 114 RREEKL 119
R++EKL
Sbjct: 61 RKQEKL 66
>gi|17861402|gb|AAL39178.1| GH01528p [Drosophila melanogaster]
Length = 357
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 6 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 65
Query: 114 RREEKL 119
R++EK+
Sbjct: 66 RKQEKI 71
>gi|435419|gb|AAA03627.1| PAX-3-FKHR gene fusion, partial [Homo sapiens]
Length = 689
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 68/100 (68%), Gaps = 7/100 (7%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK-E 76
K +DG+ S+ D GS+++ E D L LKRK +R+RT+FT +Q++ LE
Sbjct: 37 KHSIDGILSERASAPQSDE---GSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELEHVA 90
Query: 77 FERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
FERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 91 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 130
>gi|391345791|ref|XP_003747166.1| PREDICTED: homeobox protein aristaless-like [Metaseiulus
occidentalis]
Length = 317
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LEK F +THYPDVF RE LA ++ L EAR+QVWF NRRAKWR
Sbjct: 51 KRKQRRYRTTFTSYQLEELEKAFGKTHYPDVFTREELAMRVDLTEARVQVWFQNRRAKWR 110
Query: 115 REEKLRNQRQRGSA-DPTQAPNNNNNNIVNNNNNSSDGCT 153
++EK G+ +P +P + + + SS+G T
Sbjct: 111 KQEKANGNPNPGAGFNPYSSPQS-----LPPSTTSSEGST 145
>gi|195489018|ref|XP_002092559.1| GE11607 [Drosophila yakuba]
gi|194178660|gb|EDW92271.1| GE11607 [Drosophila yakuba]
Length = 286
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 58/86 (67%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK +RNRT+F++ Q+ LEK FERTHYPD F RE LA K+ L EAR+QVWF NRRAK+RR
Sbjct: 125 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRR 184
Query: 116 EEKLRNQRQRGSADPTQAPNNNNNNI 141
E+ R A P P +NN+
Sbjct: 185 NERSVGSRPLLDAAPQLVPAPISNNM 210
>gi|313220525|emb|CBY31375.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 44 EPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQ 103
E E D++ +KRK +R+RT+FT +Q++ LEK FERTHYPD++ RE LA + L EAR+Q
Sbjct: 188 EDELDESGQPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYTREELAQRTKLTEARVQ 247
Query: 104 VWFSNRRAKWRREEKLRNQRQRGSAD 129
VWFSNRRA+WR++ GSA
Sbjct: 248 VWFSNRRARWRKQVGAAQLPMPGSAS 273
>gi|348500845|ref|XP_003437982.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 546
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/99 (48%), Positives = 71/99 (71%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ D + + +S+ GS++ D + L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 188 KHSIDGILGDRSSAS---HSDEGSDV---DSEPGLPLKRKQRRSRTTFTAEQLEELERAF 241
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 242 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 280
>gi|21955176|ref|NP_665710.1| dorsal root ganglia homeobox protein [Rattus norvegicus]
gi|6015028|sp|Q62798.1|DRGX_RAT RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|1144015|gb|AAA87203.1| paired-like homeodomain transcription factor [Rattus norvegicus]
Length = 263
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+F Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + ++ G+ +P
Sbjct: 89 RKTERGASDQEPGAKEP 105
>gi|391332001|ref|XP_003740427.1| PREDICTED: uncharacterized protein LOC100907929 [Metaseiulus
occidentalis]
Length = 513
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 54/63 (85%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LE+EFE+THYP V RERLA+K GL EAR+QVWFSNRRAKWRR
Sbjct: 352 KFRRNRTTFSPEQLEVLEEEFEKTHYPCVDTRERLASKTGLSEARVQVWFSNRRAKWRRH 411
Query: 117 EKL 119
+++
Sbjct: 412 QRM 414
>gi|166795309|ref|NP_001107659.1| eyegone [Nasonia vitripennis]
Length = 649
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEFER+HYP V RERLA+K L EAR+QVWFSNRRAKWRR
Sbjct: 453 KFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRH 512
Query: 117 EKL 119
+++
Sbjct: 513 QRM 515
>gi|331271828|gb|AED02519.1| paired box 3 protein [Coturnix japonica]
Length = 114
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ S+ S+ GS+++ E D L LK K +R+RT+FT +Q++ LE+ F
Sbjct: 19 KHSIDGILSERASAP---QSDEGSDIDSEPD---LPLKGKQRRSRTTFTAEQLEELERAF 72
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
ERTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 73 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 111
>gi|32816237|gb|AAP88434.1| PaxB homeobox protein [Nematostella vectensis]
Length = 298
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS+ E D + + +R RT+FT++QI+ LEK FE+THYPDVF RE LA ++ L E
Sbjct: 200 GSHSGDEGDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVNLSE 259
Query: 100 ARIQVWFSNRRAKWRREEK 118
ARIQVWFSNRRAKWR+E K
Sbjct: 260 ARIQVWFSNRRAKWRKEGK 278
>gi|405963382|gb|EKC28959.1| Uncharacterized protein C3orf32 [Crassostrea gigas]
Length = 1064
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%)
Query: 49 QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSN 108
+AR +RK +R RT+FTN Q+ LEK F +THYPDV RERLA LPEARIQVWF N
Sbjct: 779 EARFGCQRKQRRCRTAFTNQQLSTLEKTFAKTHYPDVVMRERLAMMTNLPEARIQVWFKN 838
Query: 109 RRAKWRREEKL 119
RRAK+R+++K+
Sbjct: 839 RRAKYRKKQKV 849
>gi|340710888|ref|XP_003394015.1| PREDICTED: hypothetical protein LOC100648670 [Bombus terrestris]
Length = 646
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEFER+HYP V RERLA+K L EAR+QVWFSNRRAKWRR
Sbjct: 418 KFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRH 477
Query: 117 EKL 119
+++
Sbjct: 478 QRM 480
>gi|195575589|ref|XP_002077660.1| GD23036 [Drosophila simulans]
gi|194189669|gb|EDX03245.1| GD23036 [Drosophila simulans]
Length = 355
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 6 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 65
Query: 114 RREEKL 119
R++EK+
Sbjct: 66 RKQEKI 71
>gi|74178801|dbj|BAE34043.1| unnamed protein product [Mus musculus]
Length = 363
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 24 LGSDETCTTIGDNSNPGSNLEPEDDQARLRL-KRKLQRNRTSFTNDQIDNLEKEFERTHY 82
LGS + ++ + + E D + L L KRK +R+RT FT Q++ LEK F HY
Sbjct: 136 LGSQQRSESVSTSDGDSPSEEKNDPKMSLTLGKRKKRRHRTVFTAHQLEELEKAFGEAHY 195
Query: 83 PDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
PDV+ARE LAAK LPE RIQVWF NRRAKWR+ EK
Sbjct: 196 PDVYAREMLAAKTELPEDRIQVWFQNRRAKWRKREK 231
>gi|195327129|ref|XP_002030274.1| GM24656 [Drosophila sechellia]
gi|194119217|gb|EDW41260.1| GM24656 [Drosophila sechellia]
Length = 669
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 9/141 (6%)
Query: 7 PLETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKR-------KLQ 59
P+ T ++ + G G+ T I S LE D+ + K +
Sbjct: 290 PVSTCGSLSSAHLMAGGAGATPTNRAISPGSGSHDTLESADENRHIDSDYLDDDDEPKFR 349
Query: 60 RNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
RNRT+F+ +Q++ LEKEF+++HYP V RERL+++ L EAR+QVWFSNRRAKWRR +++
Sbjct: 350 RNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRM 409
Query: 120 -RNQRQRGS-ADPTQAPNNNN 138
+RQR S A+P + +N+
Sbjct: 410 NLLKRQRSSPANPLHSQQSND 430
>gi|115702398|ref|XP_785238.2| PREDICTED: homeobox protein aristaless-like 4-like
[Strongylocentrotus purpuratus]
Length = 353
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 20/124 (16%)
Query: 16 TDKIELDGLGSDETCT--TIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNL 73
T K E+ GS E ++GD++N KRK +RNRT+FT+ Q++ +
Sbjct: 77 TVKAEISDHGSPEGALNGSLGDDANA---------------KRKKRRNRTTFTSFQLEEM 121
Query: 74 EKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLR---NQRQRGSADP 130
EK F++THYPDV+ RE+LA + L EAR+QVWF NRRAKWR+ E+ R + P
Sbjct: 122 EKVFQKTHYPDVYCREQLALRCDLTEARVQVWFQNRRAKWRKRERFSQFNTMRAMATGTP 181
Query: 131 TQAP 134
+ P
Sbjct: 182 YEMP 185
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 233 VRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 292
Query: 114 RREEKLR-NQRQR------GSADPTQ-APNNNNNNIVNNNNNSSDGCTPSPAP 158
R+ E+L+ QR+R G+ + T AP +++ + + +G T S AP
Sbjct: 293 RKSERLKEEQRKREGNGGGGALETTGLAPPTSSSAGPSPTGHDPEGTTSSSAP 345
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 185 VRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 244
Query: 114 RREEKLR-NQRQR------GSADPTQ-APNNNNNNIVNNNNNSSDGCTPSPAP 158
R+ E+L+ QR+R G+ + T AP +++ + + +G T S AP
Sbjct: 245 RKSERLKEEQRKREGNGGGGALETTGLAPPTSSSAGPSPTGHDPEGTTSSSAP 297
>gi|124054602|gb|ABM89502.1| Pax3 [Scyliorhinus canicula]
Length = 319
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 18 KIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEF 77
K +DG+ +++ +NS+ S+++ E D L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 93 KHSIDGILANK-----ANNSDEASDIDSEPD---LPLKRKQRRSRTTFTAEQLEELERAF 144
Query: 78 ERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
RTHYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 145 GRTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 183
>gi|405965818|gb|EKC31172.1| Homeobox protein aristaless [Crassostrea gigas]
Length = 332
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA +I L EAR+QVWF NRRAKWR
Sbjct: 114 KRKQRRYRTTFTSFQLEELERAFQKTHYPDVFMREELAMRIDLTEARVQVWFQNRRAKWR 173
Query: 115 REEKLRNQ 122
++EK+ Q
Sbjct: 174 KKEKVGPQ 181
>gi|194853616|ref|XP_001968194.1| GG24732 [Drosophila erecta]
gi|190660061|gb|EDV57253.1| GG24732 [Drosophila erecta]
Length = 352
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 60
Query: 114 RREEKL 119
R++EK+
Sbjct: 61 RKQEKI 66
>gi|313475156|dbj|BAJ41033.1| aristaless-like transcription factor [Scaphechinus mirabilis]
Length = 463
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK +RNRT+FT+ Q++ +EK F+RTHYPDV+ RE+LA + L EAR+QVWF NRRAKWR+
Sbjct: 134 RKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNRRAKWRK 193
Query: 116 EEKLRN-QRQRG 126
E+ + Q RG
Sbjct: 194 RERFQQFQNMRG 205
>gi|332017817|gb|EGI58478.1| Homeobox protein ARX [Acromyrmex echinatior]
Length = 248
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 64/98 (65%)
Query: 21 LDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERT 80
+DG C + + E E+ + + KRK +R RT+F+N Q++ LE+ F++T
Sbjct: 59 IDGAQFTSVCFPAKFTYDFSTGPESEERPSCVIGKRKQRRYRTTFSNFQLEELERAFQKT 118
Query: 81 HYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
HYPDVF RE LA +I L EAR+QVWF NRRAKWR++EK
Sbjct: 119 HYPDVFFREELAVRIQLTEARVQVWFQNRRAKWRKQEK 156
>gi|126272861|ref|XP_001366013.1| PREDICTED: dorsal root ganglia homeobox protein-like [Monodelphis
domestica]
Length = 260
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSADP 130
R+ E+ + Q GS +P
Sbjct: 89 RKTERGASD-QEGSKEP 104
>gi|195350151|ref|XP_002041605.1| GM16755 [Drosophila sechellia]
gi|194123378|gb|EDW45421.1| GM16755 [Drosophila sechellia]
Length = 348
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 60
Query: 114 RREEKL 119
R++EK+
Sbjct: 61 RKQEKI 66
>gi|295656520|gb|ADG26723.1| ARX homeobox protein [Platynereis dumerilii]
Length = 283
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA +I L EAR+QVWF NRRAKWR
Sbjct: 196 KRKQRRYRTTFTSFQLEELERAFQKTHYPDVFTREELAMRINLTEARVQVWFQNRRAKWR 255
Query: 115 REEKL 119
++EK+
Sbjct: 256 KKEKV 260
>gi|443689640|gb|ELT91996.1| hypothetical protein CAPTEDRAFT_44697, partial [Capitella teleta]
Length = 255
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 55/65 (84%)
Query: 52 LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRA 111
L L RK +R+RT+F+ DQ+++LEK F+RTHYPD++ RE LA + GL EAR+QVWFSNRRA
Sbjct: 163 LSLSRKQRRSRTTFSADQLEHLEKAFDRTHYPDIYTREELAQRSGLTEARVQVWFSNRRA 222
Query: 112 KWRRE 116
+WR++
Sbjct: 223 RWRKQ 227
>gi|195470310|ref|XP_002087451.1| GE16946 [Drosophila yakuba]
gi|194173552|gb|EDW87163.1| GE16946 [Drosophila yakuba]
Length = 353
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 60
Query: 114 RREEKL 119
R++EK+
Sbjct: 61 RKQEKI 66
>gi|194747107|ref|XP_001955994.1| GF24980 [Drosophila ananassae]
gi|190623276|gb|EDV38800.1| GF24980 [Drosophila ananassae]
Length = 618
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 64/84 (76%)
Query: 42 NLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
++E ED +++ + K +RNRT+F+ +Q+D LEKEFE++HYP V RE+LA + L EAR
Sbjct: 353 DIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFEKSHYPCVSTREKLAGRTALSEAR 412
Query: 102 IQVWFSNRRAKWRREEKLRNQRQR 125
+QVWFSNRRAKWRR +++ +QR
Sbjct: 413 VQVWFSNRRAKWRRHQRVNLLKQR 436
>gi|426368049|ref|XP_004051027.1| PREDICTED: homeobox protein aristaless-like 4 [Gorilla gorilla
gorilla]
Length = 409
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Query: 41 SNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEA 100
S LE D ++ K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EA
Sbjct: 198 SPLEKADSESS---KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEA 254
Query: 101 RIQVWFSNRRAKWRREEKLRNQRQ 124
R+QVWF NRRAKWR+ E+ +Q
Sbjct: 255 RVQVWFQNRRAKWRKRERFGQMQQ 278
>gi|259053117|emb|CAX11345.1| pairberry [Parasteatoda tepidariorum]
Length = 296
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 17/141 (12%)
Query: 14 NTTDKIELDGLGSDET-CTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDN 72
++ D I LG+DE+ C S PG + LKRK +R+RT+F+ +Q++
Sbjct: 132 HSIDGILGGRLGNDESDC-----ESEPG-----------IPLKRKQRRSRTTFSAEQVEE 175
Query: 73 LEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQ 132
LE+ FERT YPD++ RE LA + GL EAR+QVWFSNRRA+WR++ ++ SA PT
Sbjct: 176 LERAFERTQYPDIYTREELALRTGLTEARVQVWFSNRRARWRKQVGGQHLTAAFSAAPTV 235
Query: 133 APNNNNNNIVNNNNNSSDGCT 153
+ N N D T
Sbjct: 236 PLGYSANPHCYEANAHPDAST 256
>gi|195147184|ref|XP_002014560.1| GL18888 [Drosophila persimilis]
gi|198473726|ref|XP_001356418.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
gi|194106513|gb|EDW28556.1| GL18888 [Drosophila persimilis]
gi|198138081|gb|EAL33482.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
Length = 376
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 60
Query: 114 RREEKL 119
R++EK+
Sbjct: 61 RKQEKI 66
>gi|363735465|ref|XP_001234656.2| PREDICTED: dorsal root ganglia homeobox protein [Gallus gallus]
Length = 260
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 7/76 (9%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSAD 129
R+ E RGS+D
Sbjct: 89 RKTE-------RGSSD 97
>gi|194886966|ref|XP_001976720.1| GG23031 [Drosophila erecta]
gi|190659907|gb|EDV57120.1| GG23031 [Drosophila erecta]
Length = 427
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 75/123 (60%), Gaps = 21/123 (17%)
Query: 44 EPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARI 102
E EDD + ++LKRK +R+RT+F+NDQID LE+ F RT YPDV+ RE LA GL EAR+
Sbjct: 170 ESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARV 229
Query: 103 QVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTP--SPAPQV 160
QVWFSNRRA+ R++ N +Q S PT +++ G TP S AP
Sbjct: 230 QVWFSNRRARLRKQ---LNTQQVPSFAPT---------------STTYGATPTTSAAPAS 271
Query: 161 SMD 163
SM
Sbjct: 272 SMG 274
>gi|345487147|ref|XP_001599246.2| PREDICTED: hypothetical protein LOC100114080 [Nasonia vitripennis]
Length = 988
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
Query: 22 DGLGSDETCTT--IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFER 79
D G DE IG ++ GS+ E E ++LKRK +R+RT+FT Q+D LE+ FER
Sbjct: 611 DADGKDERAVAGYIGGKASSGSDCESEPG---IQLKRKQRRSRTTFTAQQLDELERAFER 667
Query: 80 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
T YPD++ RE LA + L EARIQVWFSNRRA+ R++
Sbjct: 668 TQYPDIYTREELAQRTKLTEARIQVWFSNRRARLRKQ 704
>gi|16905095|ref|NP_473409.1| visual system homeobox 1 [Mus musculus]
gi|25009568|sp|Q91V10.1|VSX1_MOUSE RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|15811381|gb|AAL08947.1|AF395732_1 visual system homeobox 1 [Mus musculus]
gi|15825170|gb|AAL09584.1|AF391757_1 homeodomain protein RINX [Mus musculus]
gi|15825172|gb|AAL09585.1|AF391758_1 homeodomain protein RINX [Mus musculus]
gi|16580161|gb|AAL11431.1| transcription factor VSX1 [Mus musculus]
gi|34785871|gb|AAH57647.1| Visual system homeobox 1 homolog (zebrafish) [Mus musculus]
gi|187953917|gb|AAI38461.1| Vsx1 protein [Mus musculus]
gi|223460705|gb|AAI38457.1| Vsx1 protein [Mus musculus]
Length = 363
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 24 LGSDETCTTIGDNSNPGSNLEPEDDQARLRL-KRKLQRNRTSFTNDQIDNLEKEFERTHY 82
LGS + ++ + + E D + L L KRK +R+RT FT Q++ LEK F HY
Sbjct: 136 LGSQQRSESVSTSDGDSPSEEKNDPKMSLILGKRKKRRHRTVFTAHQLEELEKAFGEAHY 195
Query: 83 PDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
PDV+ARE LAAK LPE RIQVWF NRRAKWR+ EK
Sbjct: 196 PDVYAREMLAAKTELPEDRIQVWFQNRRAKWRKREK 231
>gi|12858413|dbj|BAB31309.1| unnamed protein product [Mus musculus]
Length = 240
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 39 PGSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGL 97
PGS LE P DQ + K K +R RT+FT +Q+ LEK F THYPD+ R +LA++I L
Sbjct: 59 PGSKLERPPQDQPQEEKKNK-RRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINL 117
Query: 98 PEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPS 155
PEAR+Q+WF N+RAKWR++EK G+ Q P + +N + S TP+
Sbjct: 118 PEARVQIWFQNQRAKWRKQEK------SGNLSAPQQPGEAGLALPSNMDVSGPVLTPT 169
>gi|71892442|ref|NP_001025475.1| homeobox protein aristaless-like 4 [Bos taurus]
gi|109940203|sp|Q4LAL6.1|ALX4_BOVIN RecName: Full=Homeobox protein aristaless-like 4
gi|70561331|emb|CAJ14976.1| aristaless-like homeobox 4 [Bos taurus]
Length = 397
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 256
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 257 KRERFGQMQQ 266
>gi|391340589|ref|XP_003744622.1| PREDICTED: retinal homeobox protein Rx3-like [Metaseiulus
occidentalis]
Length = 301
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
+RK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA ++ L EAR+QVWF NRRAKWR
Sbjct: 72 RRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAVRVDLTEARVQVWFQNRRAKWR 131
Query: 115 REEK 118
++EK
Sbjct: 132 KQEK 135
>gi|148233818|ref|NP_001082826.1| aristaless-like homeobox 4 [Danio rerio]
gi|134025313|gb|AAI35030.1| Zgc:162606 protein [Danio rerio]
Length = 364
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 34 GDNSNPGSNLEPEDDQARLRL-KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
G + P S+L D++ K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA
Sbjct: 146 GQSDRPVSDLGSALDKSEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 205
Query: 93 AKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
+ L EAR+QVWF NRRAKWR+ E+ +Q
Sbjct: 206 LRTDLTEARVQVWFQNRRAKWRKRERFGQMQQ 237
>gi|118343665|ref|NP_001071654.1| transcription factor protein [Ciona intestinalis]
gi|70568894|dbj|BAE06312.1| transcription factor protein [Ciona intestinalis]
Length = 429
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 55/72 (76%)
Query: 47 DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWF 106
DDQ R KRK +R RT+F+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+QVWF
Sbjct: 209 DDQDRNSSKRKQRRYRTTFSAFQLEELERAFQKTHYPDVFTREELAMRVDLTEARVQVWF 268
Query: 107 SNRRAKWRREEK 118
NRRAKWR+ EK
Sbjct: 269 QNRRAKWRKREK 280
>gi|125820954|ref|XP_001340966.1| PREDICTED: aristaless-like homeobox 4a [Danio rerio]
Length = 368
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 172 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 231
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 232 KRERFGQMQQ 241
>gi|345484335|ref|XP_001599456.2| PREDICTED: paired mesoderm homeobox protein 2-like [Nasonia
vitripennis]
Length = 250
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+FTN Q++ LE+ F++THYPDVF RE LA +I L EAR+QVWF NRRAKWR
Sbjct: 93 KRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEARVQVWFQNRRAKWR 152
Query: 115 REEK 118
++EK
Sbjct: 153 KQEK 156
>gi|73982544|ref|XP_850737.1| PREDICTED: ALX homeobox 4 isoform 1 [Canis lupus familiaris]
Length = 414
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 214 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 273
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 274 KRERFGQMQQ 283
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+QVWF NRRAKW
Sbjct: 10 LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKW 69
Query: 114 RREEKLRNQ 122
R+ EK Q
Sbjct: 70 RKREKAGAQ 78
>gi|410973607|ref|XP_003993239.1| PREDICTED: homeobox protein aristaless-like 4 [Felis catus]
Length = 408
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 208 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 267
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 268 KRERFGQMQQ 277
>gi|322800741|gb|EFZ21645.1| hypothetical protein SINV_12341 [Solenopsis invicta]
Length = 247
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 53/64 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+F+N Q++ LE+ F++THYPDVF RE LA +I L EAR+QVWF NRRAKWR
Sbjct: 91 KRKQRRYRTTFSNFQLEELERAFQKTHYPDVFFREELAVRIQLTEARVQVWFQNRRAKWR 150
Query: 115 REEK 118
++EK
Sbjct: 151 KQEK 154
>gi|195439910|ref|XP_002067802.1| GK12628 [Drosophila willistoni]
gi|194163887|gb|EDW78788.1| GK12628 [Drosophila willistoni]
Length = 692
Score = 95.5 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/108 (43%), Positives = 74/108 (68%), Gaps = 9/108 (8%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEF+++HYP V RERL+++ L EAR+QVWFSNRRAKWRR
Sbjct: 365 KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRH 424
Query: 117 EK---LRNQRQRGSADPTQAPNNNNNNIV------NNNNNSSDGCTPS 155
++ L+ QR + +P + +N +N + +N++N+S P+
Sbjct: 425 QRMNLLKRQRSSPTVNPLHSQQSNESNPIASSPTPSNHSNASVSTNPA 472
>gi|119588472|gb|EAW68066.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 270
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 271 KRERFGQMQQ 280
>gi|14017793|dbj|BAB47417.1| KIAA1788 protein [Homo sapiens]
Length = 413
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 213 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 272
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 273 KRERFGQMQQ 282
>gi|55743092|ref|NP_068745.2| homeobox protein aristaless-like 4 [Homo sapiens]
gi|254763249|sp|Q9H161.2|ALX4_HUMAN RecName: Full=Homeobox protein aristaless-like 4
gi|11125719|emb|CAC15120.1| homeodomain transcription factor ALX4 [Homo sapiens]
gi|168278961|dbj|BAG11360.1| aristaless-like homeobox 4 [synthetic construct]
gi|187252473|gb|AAI66622.1| ALX homeobox 4 [synthetic construct]
Length = 411
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 270
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 271 KRERFGQMQQ 280
>gi|432112496|gb|ELK35234.1| Dorsal root ganglia homeobox protein [Myotis davidii]
Length = 180
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 28 ETCTTIGDNSNPGSNLEPED-DQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVF 86
E +G + P N P D D LR RK +RNRT+FT Q++ LE F +THYPDVF
Sbjct: 46 ENWAVLGTGTAPFGNHPPGDFDDGFLR--RKQRRNRTTFTLQQLEALEAVFAQTHYPDVF 103
Query: 87 ARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSAD 129
RE LA KI L EAR+QVWF NRRAKWR+ E+ + ++ G+ +
Sbjct: 104 TREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKE 146
>gi|13774326|gb|AAK38835.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 270
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 271 KRERFGQMQQ 280
>gi|11125350|emb|CAC15060.1| homeodomain transcription factor ALX4 [Homo sapiens]
Length = 411
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 270
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 271 KRERFGQMQQ 280
>gi|160333498|ref|NP_082113.2| intestine-specific homeobox [Mus musculus]
gi|150387850|sp|A1A546.2|ISX_MOUSE RecName: Full=Intestine-specific homeobox
gi|120530316|gb|AAI28291.2| Intestine specific homeobox [Mus musculus]
gi|148678873|gb|EDL10820.1| mCG14995 [Mus musculus]
gi|171363651|dbj|BAG14383.1| pancreas-intestine homeodomain transcription factor [Mus musculus]
Length = 240
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 39 PGSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGL 97
PGS LE P DQ + K K +R RT+FT +Q+ LEK F THYPD+ R +LA++I L
Sbjct: 59 PGSKLERPPQDQPQEEKKNK-RRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINL 117
Query: 98 PEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPS 155
PEAR+Q+WF N+RAKWR++EK G+ Q P + +N + S TP+
Sbjct: 118 PEARVQIWFQNQRAKWRKQEK------SGNLSAPQQPGEAGLALPSNMDVSGPVLTPT 169
>gi|410901415|ref|XP_003964191.1| PREDICTED: dorsal root ganglia homeobox protein-like [Takifugu
rubripes]
Length = 307
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 68/111 (61%), Gaps = 14/111 (12%)
Query: 20 ELDGLGSDETCTTIGDNSNPGSNLEPED-DQARLRLKRKLQRNRTSFTNDQIDNLEKEFE 78
+LDG E C + NS+ + P D D LR RK +RNRT+FT Q++ LE F
Sbjct: 9 QLDG----ECCRSNTLNSSGFGSHAPADFDDGFLR--RKQRRNRTTFTLQQLEALEAVFA 62
Query: 79 RTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSAD 129
+THYPDVF RE LA KI L EAR+QVWF NRRAKWR+ E RGS D
Sbjct: 63 QTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTE-------RGSTD 106
>gi|403254633|ref|XP_003920066.1| PREDICTED: homeobox protein aristaless-like 4 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 194 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 253
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 254 KRERFGQMQQ 263
>gi|340730425|gb|AEK64853.1| aristaless-like homeobox 4 protein [Xenopus (Silurana) tropicalis]
Length = 321
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
GS P D K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L E
Sbjct: 108 GSGDLPMDKTESESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTE 167
Query: 100 ARIQVWFSNRRAKWRREEKLRNQRQ 124
AR+QVWF NRRAKWR+ E+ +Q
Sbjct: 168 ARVQVWFQNRRAKWRKRERFGQMQQ 192
>gi|332016410|gb|EGI57323.1| Paired box protein Pax-6 [Acromyrmex echinatior]
Length = 787
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEFER+HYP V RERLA+K L EAR+QVWFSNRRAKWRR
Sbjct: 413 KFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRH 472
Query: 117 EKL 119
+++
Sbjct: 473 QRM 475
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEFER+HYP V RERLA+K L EAR+QVWFSNRRAKWRR
Sbjct: 550 KFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRH 609
Query: 117 EKL 119
+++
Sbjct: 610 QRM 612
>gi|195066771|ref|XP_001996841.1| GH11036 [Drosophila grimshawi]
gi|193891514|gb|EDV90380.1| GH11036 [Drosophila grimshawi]
Length = 372
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKW 60
Query: 114 RREEKL 119
R++EK+
Sbjct: 61 RKQEKI 66
>gi|307188971|gb|EFN73488.1| Retinal homeobox protein Rx2 [Camponotus floridanus]
Length = 446
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEFER+HYP V RERLA+K L EAR+QVWFSNRRAKWRR
Sbjct: 211 KFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRH 270
Query: 117 EKL 119
+++
Sbjct: 271 QRM 273
>gi|60678223|gb|AAX33618.1| AT09010p [Drosophila melanogaster]
Length = 675
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 7 PLETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKR-------KLQ 59
P+ T ++ + G G T I S LE D+ + K +
Sbjct: 295 PVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENRHIDSDYLDDDDEPKFR 354
Query: 60 RNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
RNRT+F+ +Q++ LEKEF+++HYP V RERL+++ L EAR+QVWFSNRRAKWRR +++
Sbjct: 355 RNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRM 414
Query: 120 -RNQRQRGS-ADPTQAPNNNN 138
+RQR S A+P + +N+
Sbjct: 415 NLLKRQRSSPANPLHSQQSND 435
>gi|18859207|ref|NP_571352.1| paired box protein Pax-3 [Danio rerio]
gi|2909765|gb|AAC41253.1| transcription factor PAX3 [Danio rerio]
Length = 509
Score = 95.5 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 61/84 (72%)
Query: 33 IGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLA 92
+GD S+ D + L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA
Sbjct: 195 LGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 254
Query: 93 AKIGLPEARIQVWFSNRRAKWRRE 116
+ L EAR+QVWFSNRRA+WR++
Sbjct: 255 QRAKLTEARVQVWFSNRRARWRKQ 278
>gi|432114786|gb|ELK36541.1| Visual system homeobox 1 [Myotis davidii]
Length = 221
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 50/64 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FTN Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 23 KRKKRRHRTVFTNQQLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWR 82
Query: 115 REEK 118
++EK
Sbjct: 83 KQEK 86
>gi|195032847|ref|XP_001988573.1| GH11236 [Drosophila grimshawi]
gi|193904573|gb|EDW03440.1| GH11236 [Drosophila grimshawi]
Length = 372
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKW 60
Query: 114 RREEKL 119
R++EK+
Sbjct: 61 RKQEKI 66
>gi|45383792|ref|NP_989493.1| homeobox protein aristaless-like 4 [Gallus gallus]
gi|3661601|gb|AAC61772.1| paired type homeodomain protein [Gallus gallus]
Length = 387
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 189 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 248
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 249 KRERFGQMQQ 258
>gi|344281094|ref|XP_003412315.1| PREDICTED: homeobox protein aristaless-like 4-like [Loxodonta
africana]
Length = 406
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 206 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 265
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 266 KRERFGQMQQ 275
>gi|322787295|gb|EFZ13431.1| hypothetical protein SINV_14947 [Solenopsis invicta]
Length = 439
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEFER+HYP V RERLA+K L EAR+QVWFSNRRAKWRR
Sbjct: 199 KFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRH 258
Query: 117 EKL 119
+++
Sbjct: 259 QRM 261
>gi|440897881|gb|ELR49486.1| Homeobox protein aristaless-like 4, partial [Bos grunniens mutus]
Length = 385
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 185 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 244
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 245 KRERFGQMQQ 254
>gi|157818677|ref|NP_001100023.1| homeobox protein aristaless-like 4 [Rattus norvegicus]
gi|149022700|gb|EDL79594.1| aristaless 4 (predicted) [Rattus norvegicus]
Length = 399
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Query: 41 SNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEA 100
S LE D ++ K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EA
Sbjct: 188 SPLEKTDSESS---KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEA 244
Query: 101 RIQVWFSNRRAKWRREEKLRNQRQ 124
R+QVWF NRRAKWR+ E+ +Q
Sbjct: 245 RVQVWFQNRRAKWRKRERFGQMQQ 268
>gi|380026558|ref|XP_003697017.1| PREDICTED: uncharacterized protein LOC100870999 [Apis florea]
Length = 511
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEFER+HYP V RERLA+K L EAR+QVWFSNRRAKWRR
Sbjct: 254 KFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRH 313
Query: 117 EKL 119
+++
Sbjct: 314 QRM 316
>gi|291384886|ref|XP_002709113.1| PREDICTED: aristaless-like homeobox 4-like [Oryctolagus cuniculus]
Length = 397
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 256
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 257 KRERFGQMQQ 266
>gi|402893728|ref|XP_003910041.1| PREDICTED: homeobox protein aristaless-like 4 [Papio anubis]
Length = 409
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 268
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 269 KRERFGQMQQ 278
>gi|363743158|ref|XP_003642783.1| PREDICTED: homeobox protein aristaless-like 3-like [Gallus gallus]
Length = 261
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 74/119 (62%), Gaps = 7/119 (5%)
Query: 53 RLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAK 112
R K K +RNRT+F+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAK
Sbjct: 70 RSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELSEARVQVWFQNRRAK 129
Query: 113 WRREEKL-RNQRQRGSADPTQ---APNNNNNNIVNNNNNSSDGCTP---SPAPQVSMDP 164
WR+ E+ + Q R P Q P NN ++ + + P +P+P+VS P
Sbjct: 130 WRKRERYGKIQEVRTPPLPPQHHTPPQLQNNLWPSSGSPAGPSLVPPDSAPSPRVSPYP 188
>gi|355566588|gb|EHH22967.1| Homeobox protein aristaless-like 4 [Macaca mulatta]
Length = 409
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 268
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 269 KRERFGQMQQ 278
>gi|301620871|ref|XP_002939787.1| PREDICTED: dorsal root ganglia homeobox protein-like [Xenopus
(Silurana) tropicalis]
Length = 263
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 40 GSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
G++ E D LR RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L E
Sbjct: 18 GAHAASEFDDGFLR--RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTE 75
Query: 100 ARIQVWFSNRRAKWRREEK 118
AR+QVWF NRRAKWR+ E+
Sbjct: 76 ARVQVWFQNRRAKWRKTER 94
>gi|109106654|ref|XP_001113643.1| PREDICTED: homeobox protein aristaless-like 4-like [Macaca mulatta]
Length = 409
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 268
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 269 KRERFGQMQQ 278
>gi|6671541|ref|NP_031468.1| homeobox protein aristaless-like 4 [Mus musculus]
gi|13626102|sp|O35137.1|ALX4_MOUSE RecName: Full=Homeobox protein aristaless-like 4; AltName:
Full=ALX-4
gi|2352266|gb|AAC39943.1| paired-type homeodomain transcription factor [Mus musculus]
gi|148695681|gb|EDL27628.1| aristaless 4 [Mus musculus]
Length = 399
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 199 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 258
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 259 KRERFGQMQQ 268
>gi|348509621|ref|XP_003442346.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 373
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 176 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 235
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 236 KRERFGQMQQ 245
>gi|307175916|gb|EFN65729.1| Homeobox protein ARX [Camponotus floridanus]
Length = 249
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 53/64 (82%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+F+N Q++ LE+ F++THYPDVF RE LA +I L EAR+QVWF NRRAKWR
Sbjct: 94 KRKQRRYRTTFSNFQLEELERAFQKTHYPDVFFREELAVRIQLTEARVQVWFQNRRAKWR 153
Query: 115 REEK 118
++EK
Sbjct: 154 KQEK 157
>gi|195012799|ref|XP_001983749.1| GH16064 [Drosophila grimshawi]
gi|193897231|gb|EDV96097.1| GH16064 [Drosophila grimshawi]
Length = 632
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 77/111 (69%), Gaps = 7/111 (6%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEF+++HYP V RERL+++ L EAR+QVWFSNRRAKWRR
Sbjct: 327 KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRH 386
Query: 117 EKL-RNQRQRGS-ADPTQAPNNNNNNI-----VNNNNNSSDGCTPSPAPQV 160
+++ +RQR S A+P + +N+ + ++++N+S TP P V
Sbjct: 387 QRMNLLKRQRSSPANPLHSQQSNDGPVTSSPTPSSHSNASAPTTPHAHPSV 437
>gi|15146041|gb|AAK82937.1| pairberry 2 transcription factor [Schistocerca americana]
Length = 341
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 55/74 (74%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
LKRK +R+RT+F+ DQ++ LE+ F+RT YPDV+ RE LA + GL EARIQVWFSNRRA+W
Sbjct: 130 LKRKQRRSRTTFSGDQLETLERAFQRTQYPDVYTREELARRTGLSEARIQVWFSNRRARW 189
Query: 114 RREEKLRNQRQRGS 127
R+ Q G+
Sbjct: 190 RKHCGASQQTAFGA 203
>gi|24663292|ref|NP_524042.2| eyegone, isoform A [Drosophila melanogaster]
gi|62472161|ref|NP_001014582.1| eyegone, isoform B [Drosophila melanogaster]
gi|23093607|gb|AAF49918.2| eyegone, isoform A [Drosophila melanogaster]
gi|61678464|gb|AAX52747.1| eyegone, isoform B [Drosophila melanogaster]
Length = 670
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 7 PLETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKR-------KLQ 59
P+ T ++ + G G T I S LE D+ + K +
Sbjct: 290 PVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENRHIDSDYLDDDDEPKFR 349
Query: 60 RNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
RNRT+F+ +Q++ LEKEF+++HYP V RERL+++ L EAR+QVWFSNRRAKWRR +++
Sbjct: 350 RNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRM 409
Query: 120 -RNQRQRGS-ADPTQAPNNNN 138
+RQR S A+P + +N+
Sbjct: 410 NLLKRQRSSPANPLHSQQSND 430
>gi|190337325|gb|AAI62791.1| Dorsal root ganglia homeobox [Danio rerio]
gi|190340175|gb|AAI62787.1| Dorsal root ganglia homeobox [Danio rerio]
Length = 287
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 55/73 (75%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 38 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 97
Query: 114 RREEKLRNQRQRG 126
R+ E+ +++ G
Sbjct: 98 RKTERGTSEQDGG 110
>gi|395742931|ref|XP_003777840.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6 [Pongo
abelii]
Length = 421
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Query: 34 GDNSNP-GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N SN E D+ Q RL+LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFA ERL
Sbjct: 198 GENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFALERL 257
Query: 92 AAKIGLPEA 100
AAKI LPEA
Sbjct: 258 AAKIDLPEA 266
>gi|327281440|ref|XP_003225456.1| PREDICTED: dorsal root ganglia homeobox protein-like [Anolis
carolinensis]
Length = 261
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 51/65 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALETVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEK 118
R+ E+
Sbjct: 89 RKTER 93
>gi|189303835|gb|ACD85821.1| paired-like homeobox Prd1 [Mnemiopsis leidyi]
Length = 358
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 40 GSNLEPEDDQARLRLKRKLQR-NRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
GSN + ++ K KLQR NR +FT Q++ LEK F+ THYPDVF RE +A + L
Sbjct: 163 GSNASLATPFSSIKSKSKLQRRNRITFTAAQLEGLEKSFQETHYPDVFGREEIAYSLQLT 222
Query: 99 EARIQVWFSNRRAKWRREEKLRNQR 123
E R+QVWF NRRAKWR+ +KL N R
Sbjct: 223 EQRVQVWFQNRRAKWRKRQKLSNGR 247
>gi|10863749|gb|AAG23961.1|AF294629_1 aristaless-like 4 [Homo sapiens]
Length = 410
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 270
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 271 KRERFGQMQQ 280
>gi|194758607|ref|XP_001961553.1| GF15026 [Drosophila ananassae]
gi|190615250|gb|EDV30774.1| GF15026 [Drosophila ananassae]
Length = 325
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 60
Query: 114 RREEKL 119
R++EK+
Sbjct: 61 RKQEKI 66
>gi|21260588|gb|AAM43805.1| eyegone [Drosophila melanogaster]
Length = 670
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 7 PLETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKR-------KLQ 59
P+ T ++ + G G T I S LE D+ + K +
Sbjct: 290 PVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENRHIDSDYLDDDDEPKFR 349
Query: 60 RNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
RNRT+F+ +Q++ LEKEF+++HYP V RERL+++ L EAR+QVWFSNRRAKWRR +++
Sbjct: 350 RNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRM 409
Query: 120 -RNQRQRGS-ADPTQAPNNNN 138
+RQR S A+P + +N+
Sbjct: 410 NLLKRQRSSPANPLHSQQSND 430
>gi|3659897|gb|AAC78330.1| Eyegone [Drosophila melanogaster]
Length = 523
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 7 PLETKRFNTTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKR-------KLQ 59
P+ T ++ + G G T I S LE D+ + K +
Sbjct: 174 PVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENRHIDSDYLDDDDEPKFR 233
Query: 60 RNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
RNRT+F+ +Q++ LEKEF+++HYP V RERL+++ L EAR+QVWFSNRRAKWRR +++
Sbjct: 234 RNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRM 293
Query: 120 -RNQRQRGS-ADPTQAPNNNN 138
+RQR S A+P + +N+
Sbjct: 294 NLLKRQRSSPANPLHSQQSND 314
>gi|194753694|ref|XP_001959145.1| GF12207 [Drosophila ananassae]
gi|190620443|gb|EDV35967.1| GF12207 [Drosophila ananassae]
Length = 925
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 17/115 (14%)
Query: 34 GDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAA 93
G+ GS+ E +DD K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 539 GEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 595
Query: 94 KIGLPEARIQ-------------VWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
K+ LPE R+Q VWF NRRAKWRR+EK + R G TQ P+
Sbjct: 596 KVNLPEVRVQLGLGNCLVCNSLKVWFQNRRAKWRRQEKSESLR-LGLTHFTQLPH 649
>gi|73989846|ref|XP_850138.1| PREDICTED: visual system homeobox 1 [Canis lupus familiaris]
Length = 363
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
Query: 45 PEDDQARLRL-----KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
P +D++ L+ KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE
Sbjct: 145 PSEDRSGLKASPSSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPE 204
Query: 100 ARIQVWFSNRRAKWRREEK 118
RIQVWF NRRAKWR+ EK
Sbjct: 205 DRIQVWFQNRRAKWRKREK 223
>gi|410901020|ref|XP_003963994.1| PREDICTED: visual system homeobox 1-like [Takifugu rubripes]
Length = 366
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 10/93 (10%)
Query: 26 SDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDV 85
SDE C + ++S +N + KRK +R+RT FT+ Q++ LEK F+ HYPDV
Sbjct: 135 SDEECLSDRNDSKSSANSQ----------KRKKRRHRTVFTSHQLEELEKAFQEAHYPDV 184
Query: 86 FARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
+ARE LA K LPE RIQVWF NRRAKWR+ EK
Sbjct: 185 YAREMLAMKTELPEDRIQVWFQNRRAKWRKREK 217
>gi|348539021|ref|XP_003456988.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 554
Score = 95.1 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
+S+ GS +E E D L LKRK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA +
Sbjct: 201 HSDEGSEVESEPD---LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRA 257
Query: 96 GLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPS 155
L EAR+QVWFSNRRA+WR++ P P + ++I + S PS
Sbjct: 258 KLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMSSIPPYQLSDSS-YPPS 316
Query: 156 PAPQVSMDPTDFNR 169
QVS P+ +R
Sbjct: 317 SIAQVSEPPSTVHR 330
>gi|354491350|ref|XP_003507818.1| PREDICTED: homeobox protein aristaless-like 4-like [Cricetulus
griseus]
Length = 319
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 119 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 178
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 179 KRERFGQMQQ 188
>gi|307199969|gb|EFN80319.1| Paired box protein Pax-7 [Harpegnathos saltator]
Length = 342
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 53/63 (84%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEFER+HYP V RERLA+K L EAR+QVWFSNRRAKWRR
Sbjct: 101 KFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRH 160
Query: 117 EKL 119
+++
Sbjct: 161 QRM 163
>gi|1840411|dbj|BAA12289.1| Pax-37 [Halocynthia roretzi]
Length = 704
Score = 95.1 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 8/97 (8%)
Query: 28 ETCTTIGDNSNPGSNLEPE--------DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFER 79
E T D S+ G+ E E D + L LKRK +R+RT+F+ DQ++ LE+ FER
Sbjct: 155 ENGNTNSDTSSNGATGEREADEGDSDCDSEPELPLKRKQRRSRTTFSADQLEELERCFER 214
Query: 80 THYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
THYPD++ RE LA + L EAR+QVWFSNRRA+WR++
Sbjct: 215 THYPDIYTREELAQRTRLTEARVQVWFSNRRARWRKQ 251
>gi|308494817|ref|XP_003109597.1| CRE-ALR-1 protein [Caenorhabditis remanei]
gi|308245787|gb|EFO89739.1| CRE-ALR-1 protein [Caenorhabditis remanei]
Length = 362
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA ++ L EAR+QVWF NRRAK+R
Sbjct: 114 KRKQRRYRTTFSAFQLDELEKVFGRTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYR 173
Query: 115 REEKLRNQRQRGSADPTQAPNNNNNN 140
++E R+ P PN+N +N
Sbjct: 174 KQE--RSSTHHPYQAPLNIPNSNGDN 197
>gi|195437558|ref|XP_002066707.1| GK24418 [Drosophila willistoni]
gi|194162792|gb|EDW77693.1| GK24418 [Drosophila willistoni]
Length = 364
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKW 60
Query: 114 RREEKL 119
R++EK+
Sbjct: 61 RKQEKI 66
>gi|295321888|pdb|3LNQ|A Chain A, Structure Of Aristaless Homeodomain In Complex With Dna
Length = 58
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 48/58 (82%)
Query: 60 RNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREE 117
R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQVWF NRRAKWR++E
Sbjct: 1 RYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQE 58
>gi|258504795|gb|ACV73003.1| ALR-1 [Caenorhabditis remanei]
gi|258504797|gb|ACV73004.1| ALR-1 [Caenorhabditis remanei]
gi|258504799|gb|ACV73005.1| ALR-1 [Caenorhabditis remanei]
gi|258504801|gb|ACV73006.1| ALR-1 [Caenorhabditis remanei]
gi|258504803|gb|ACV73007.1| ALR-1 [Caenorhabditis remanei]
gi|258504805|gb|ACV73008.1| ALR-1 [Caenorhabditis remanei]
gi|258504807|gb|ACV73009.1| ALR-1 [Caenorhabditis remanei]
gi|258504809|gb|ACV73010.1| ALR-1 [Caenorhabditis remanei]
gi|258504813|gb|ACV73012.1| ALR-1 [Caenorhabditis remanei]
gi|258504815|gb|ACV73013.1| ALR-1 [Caenorhabditis remanei]
gi|258504817|gb|ACV73014.1| ALR-1 [Caenorhabditis remanei]
gi|258504819|gb|ACV73015.1| ALR-1 [Caenorhabditis remanei]
gi|258504821|gb|ACV73016.1| ALR-1 [Caenorhabditis remanei]
gi|258504823|gb|ACV73017.1| ALR-1 [Caenorhabditis remanei]
gi|258504825|gb|ACV73018.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA ++ L EAR+QVWF NRRAK+R
Sbjct: 105 KRKQRRYRTTFSAFQLDELEKVFGRTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYR 164
Query: 115 REEKLRNQRQRGSADPTQAPNNNNNN 140
++E R+ P PN+N +N
Sbjct: 165 KQE--RSSTHHPYQAPLNIPNSNGDN 188
>gi|158170|gb|AAA28837.1| BSH9 encoded protein, partial [Drosophila melanogaster]
Length = 80
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 40 GSNLEPEDD-QARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
GS E EDD + ++LKRK +R+RT+F+NDQID LE+ F RT YPDV+ RE LA GL
Sbjct: 2 GSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLT 61
Query: 99 EARIQVWFSNRRAKWRRE 116
EAR+QVWFSNRRA+ R++
Sbjct: 62 EARVQVWFSNRRARLRKQ 79
>gi|258504811|gb|ACV73011.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA ++ L EAR+QVWF NRRAK+R
Sbjct: 105 KRKQRRYRTTFSAFQLDELEKVFGRTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYR 164
Query: 115 REEKLRNQRQRGSADPTQAPNNNNNN 140
++E R+ P PN+N +N
Sbjct: 165 KQE--RSSTHHPYQAPLNIPNSNGDN 188
>gi|198423301|ref|XP_002122162.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 625
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 36 NSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
N GS+ E E D L LKRK +R+RT+F+ +Q+D LE+ FERTHYPD++ RE LA +
Sbjct: 170 NEVGGSDSESEPD---LPLKRKQRRSRTTFSAEQLDELERCFERTHYPDIYTREELAQRT 226
Query: 96 GLPEARIQVWFSNRRAKWRRE 116
L EAR+QVWFSNRRA+WR++
Sbjct: 227 RLTEARVQVWFSNRRARWRKQ 247
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 52 LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRA 111
L KRK +R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QVWF NRRA
Sbjct: 84 LHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRA 143
Query: 112 KWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSP 156
K+R++E R +G+A T A ++++ C+P+P
Sbjct: 144 KFRKQE--RAASAKGAAGTTGAKKGEARCSSEDDDSKESTCSPTP 186
>gi|126332676|ref|XP_001368029.1| PREDICTED: homeobox protein aristaless-like 4-like [Monodelphis
domestica]
Length = 417
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 218 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 277
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 278 KRERFGQIQQ 287
>gi|432904372|ref|XP_004077298.1| PREDICTED: visual system homeobox 1-like [Oryzias latipes]
Length = 321
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 10/93 (10%)
Query: 26 SDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDV 85
SDE C + + S N + KRK +R+RT FT+ Q++ LEK F+ HYPDV
Sbjct: 98 SDEECLSDRNESKSSGNSQ----------KRKKRRHRTVFTSHQLEELEKAFQEAHYPDV 147
Query: 86 FARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
+ARE LA K LPE RIQVWF NRRAKWR+ EK
Sbjct: 148 YAREMLAMKTELPEDRIQVWFQNRRAKWRKREK 180
>gi|397473637|ref|XP_003808312.1| PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus]
Length = 424
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 224 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 283
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 284 KRERFGQMQQ 293
>gi|281344761|gb|EFB20345.1| hypothetical protein PANDA_019137 [Ailuropoda melanoleuca]
Length = 422
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 222 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 281
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 282 KRERFGQMQQ 291
>gi|351696938|gb|EHA99856.1| Homeobox protein aristaless-like 4, partial [Heterocephalus glaber]
Length = 300
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 99 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 158
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 159 KRERFGQMQQ 168
>gi|348558708|ref|XP_003465158.1| PREDICTED: homeobox protein aristaless-like 4-like [Cavia
porcellus]
Length = 407
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 207 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 266
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 267 KRERFGQMQQ 276
>gi|71997306|ref|NP_492246.2| Protein CEH-8 [Caenorhabditis elegans]
gi|68056712|sp|Q94398.3|HM08_CAEEL RecName: Full=Homeobox protein ceh-8
gi|60222935|emb|CAB03519.2| Protein CEH-8 [Caenorhabditis elegans]
Length = 276
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
+K +RNRT+FT Q+ LE F++THYPDV+ARE LAAK+ LPE R+QVWF NRRAK+RR
Sbjct: 58 KKQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAKFRR 117
Query: 116 EEK 118
+EK
Sbjct: 118 QEK 120
>gi|291229234|ref|XP_002734580.1| PREDICTED: retinal homeobox protein-like protein-like [Saccoglossus
kowalevskii]
Length = 279
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 54/64 (84%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +R+RT+F++ Q+ LE+ F RTHYPD+F RERLA +IGLPE+R+QVWF NRRAKWR
Sbjct: 109 KGKPKRSRTTFSSRQLQELERAFRRTHYPDMFTRERLARRIGLPESRVQVWFQNRRAKWR 168
Query: 115 REEK 118
++E+
Sbjct: 169 KKEQ 172
>gi|395742860|ref|XP_002821892.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pongo abelii]
Length = 407
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 208 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 267
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 268 KRERFGQMQQ 277
>gi|301787271|ref|XP_002929051.1| PREDICTED: homeobox protein aristaless-like 4-like [Ailuropoda
melanoleuca]
Length = 353
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 73/122 (59%), Gaps = 15/122 (12%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 153 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 212
Query: 115 REEKLRNQRQRGSADP--------TQAPNN---NNNNIVNNNNNSSDGCTPSPAPQVSMD 163
+ E+ +Q + T+A N N + + NN +S P PA V D
Sbjct: 213 KRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGAAS----PVPACVVPCD 268
Query: 164 PT 165
P
Sbjct: 269 PV 270
>gi|391332291|ref|XP_003740569.1| PREDICTED: uncharacterized protein LOC100905961 [Metaseiulus
occidentalis]
Length = 302
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%)
Query: 52 LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRA 111
L KRK +R RT+FT+ Q+ LE+ F+ THYPD++ RE +A K L EAR+QVWF NRRA
Sbjct: 134 LSEKRKQRRIRTTFTSAQLRELERAFQETHYPDIYTREEIAMKTDLTEARVQVWFQNRRA 193
Query: 112 KWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGC 152
K+R++E+L QR P + ++ NNN C
Sbjct: 194 KFRKQERLNQQRSSSDGMPPSPISTTADSTTNNNCQGLKDC 234
>gi|332836398|ref|XP_521895.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pan troglodytes]
Length = 410
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 210 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 269
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 270 KRERFGQMQQ 279
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 61/94 (64%), Gaps = 12/94 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 270 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 317
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK
Sbjct: 318 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 351
>gi|406719566|dbj|BAM45082.1| dorsal root ganglia homeobox, partial [Pelodiscus sinensis]
Length = 199
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 51/65 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 20 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 79
Query: 114 RREEK 118
R+ E+
Sbjct: 80 RKTER 84
>gi|390470456|ref|XP_003734292.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Callithrix jacchus]
Length = 415
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Query: 41 SNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEA 100
S LE D ++ K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EA
Sbjct: 204 SPLEKADSESN---KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEA 260
Query: 101 RIQVWFSNRRAKWRREEKLRNQRQ 124
R+QVWF NRRAKWR+ E+ +Q
Sbjct: 261 RVQVWFQNRRAKWRKRERFGQMQQ 284
>gi|170034217|ref|XP_001844971.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167875483|gb|EDS38866.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 382
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 70/112 (62%), Gaps = 18/112 (16%)
Query: 23 GLGSDETCTTIGDNSNPGSN---------------LEPEDDQARLRLKRKLQRNRTSFTN 67
G S+ T TIG +PGS +E ED + + K +RNRT+F+
Sbjct: 86 GSSSNSTPATIG---SPGSGSHDTLGSPDGSRLIDIEGEDSNSLDGDQPKFRRNRTTFSP 142
Query: 68 DQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKL 119
+Q++ LEKEF+++HYP V RERLA++ L EAR+QVWFSNRRAKWRR +++
Sbjct: 143 EQLEELEKEFDKSHYPCVSTRERLASRTSLSEARVQVWFSNRRAKWRRHQRM 194
>gi|391328229|ref|XP_003738592.1| PREDICTED: protein gooseberry-neuro-like [Metaseiulus occidentalis]
Length = 478
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 77/131 (58%), Gaps = 23/131 (17%)
Query: 52 LRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRA 111
+ LKRK++R+RT+FT +Q++ LEK F T YPDV+ RE L AK L E+R+QVWFSNRRA
Sbjct: 246 ILLKRKIRRSRTTFTAEQLEELEKAFAATQYPDVYTREELGAKTKLTESRVQVWFSNRRA 305
Query: 112 KWRRE-------------EKLRNQRQRGSADPT---------QAPNNNNNNIVNNNNNSS 149
+WR+ + +Q+ SA P+ +P+ +N+ NN+ +S
Sbjct: 306 RWRKHMSHHSTPFAPPLTYQQSHQQAPLSASPSTSDHGASGVSSPSVSNSTYANNSYDSW 365
Query: 150 DGCTPSPAPQV 160
G T S APQV
Sbjct: 366 RGST-STAPQV 375
>gi|395501652|ref|XP_003755205.1| PREDICTED: dorsal root ganglia homeobox protein [Sarcophilus
harrisii]
Length = 260
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 7/76 (9%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEKLRNQRQRGSAD 129
R+ E RG++D
Sbjct: 89 RKTE-------RGASD 97
>gi|124111346|gb|ABM92080.1| ALX4 [Pan troglodytes]
Length = 255
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 55 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 114
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 115 KRERFGQMQQ 124
>gi|449279931|gb|EMC87364.1| Dorsal root ganglia homeobox protein [Columba livia]
Length = 261
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 51/65 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEK 118
R+ E+
Sbjct: 89 RKTER 93
>gi|256087958|ref|XP_002580128.1| retinal homeobox protein [Schistosoma mansoni]
gi|360044119|emb|CCD81666.1| putative retinal homeobox protein [Schistosoma mansoni]
Length = 248
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 49/63 (77%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK +RNRT+FT Q+ LE FE +HYPDV RE LAA+I LPE R+QVWF NRRAKWRR
Sbjct: 76 RKHRRNRTTFTTFQLHELECAFEHSHYPDVLNREELAARIRLPEVRVQVWFQNRRAKWRR 135
Query: 116 EEK 118
+EK
Sbjct: 136 QEK 138
>gi|326923683|ref|XP_003208064.1| PREDICTED: dorsal root ganglia homeobox protein-like [Meleagris
gallopavo]
Length = 299
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 51/65 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 68 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 127
Query: 114 RREEK 118
R+ E+
Sbjct: 128 RKTER 132
>gi|24659086|ref|NP_611756.1| CG9876 [Drosophila melanogaster]
gi|21626590|gb|AAF46956.2| CG9876 [Drosophila melanogaster]
gi|94400579|gb|ABF17914.1| FI01017p [Drosophila melanogaster]
Length = 275
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK +RNRT+F++ Q+ LEK FERTHYPD F RE LA K+ L EAR+QVWF NRRAK+RR
Sbjct: 115 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRR 174
Query: 116 EEKLRNQRQRGSADPTQAPNNNNNNI 141
E+ R P P +NN+
Sbjct: 175 NERSVGSRTLLDTAPQLVPAPISNNM 200
>gi|344257015|gb|EGW13119.1| Homeobox protein aristaless-like 4 [Cricetulus griseus]
Length = 237
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 37 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 96
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 97 KRERFGQMQQ 106
>gi|269785141|ref|NP_001161526.1| diencephalon/mesencephalon homeobox [Saccoglossus kowalevskii]
gi|268054033|gb|ACY92503.1| Dmbx [Saccoglossus kowalevskii]
Length = 375
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK +R+RT+FTN Q+ LEK F +THYPDV RERLA LPEAR+QVWF NRRAK+R+
Sbjct: 62 RKQRRSRTAFTNQQLAALEKTFAKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 121
Query: 116 EEKLRNQRQRGSAD 129
+++L+ ++++ D
Sbjct: 122 QQRLKTKQEKPQTD 135
>gi|295855150|gb|ADG46024.1| Vsx1 A2 [Carassius auratus]
gi|316936358|gb|ADU60208.1| vsx1A2 [Carassius auratus]
Length = 340
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT+ Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWR 207
Query: 115 REEK 118
+ EK
Sbjct: 208 KREK 211
>gi|357607879|gb|EHJ65721.1| hypothetical protein KGM_00017 [Danaus plexippus]
Length = 321
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
Query: 26 SDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDV 85
+D+ T+G S+ S++E E L LKRK +R+RT+FT +Q+D LE+ F RT YPDV
Sbjct: 8 ADKRTATLGRGSD-SSDIESEPG---LTLKRKQRRSRTTFTGEQLDALERAFHRTQYPDV 63
Query: 86 FARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
+ RE LA + GL EARIQVWFSNRRA+ R+
Sbjct: 64 YTREELALQTGLTEARIQVWFSNRRARLRKH 94
>gi|358337749|dbj|GAA56083.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
Length = 529
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 59/75 (78%)
Query: 45 PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQV 104
P++ Q R K K +RNRT+FT+ Q++ +E+ F++THYPDV+ARE+LA + GL EAR+QV
Sbjct: 119 PDEQQNCDRDKLKKRRNRTTFTSFQLNEMERIFQKTHYPDVYAREQLAMRTGLTEARVQV 178
Query: 105 WFSNRRAKWRREEKL 119
WF NRRAKWR+ E+
Sbjct: 179 WFQNRRAKWRKRERF 193
>gi|383210367|dbj|BAM08280.1| twin of eyeless, partial [Gryllus bimaculatus]
Length = 213
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 46 EDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKI 95
ED Q RLRLKRKLQRNRTSFTN+QID+LEKEFERTHYPDVFARERLA KI
Sbjct: 164 EDSQLRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKI 213
>gi|221121999|ref|XP_002163595.1| PREDICTED: retinal homeobox protein Rax-like [Hydra magnipapillata]
Length = 270
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 31 TTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARER 90
+TI NS S E ++D+ ++KL+RNRT+FT Q+ LE+ F++T YPDVF RE
Sbjct: 46 STIRFNSPISS--EIKNDEIEGENRQKLRRNRTTFTTYQLHQLERSFDKTQYPDVFTREN 103
Query: 91 LAAKIGLPEARIQVWFSNRRAKWRREEKL 119
LA K+ L EAR+QVWF NRRAKWR+ EKL
Sbjct: 104 LALKLDLSEARVQVWFQNRRAKWRKREKL 132
>gi|379692648|gb|AFD10414.1| Pax3, partial [Capra hircus]
Length = 142
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 11/125 (8%)
Query: 47 DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWF 106
D + L+RK +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA + L EAR+QVWF
Sbjct: 4 DSEPDFVLRRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWF 63
Query: 107 SNRRAKWRREE-----KLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAPQVS 161
SNRRA+WR++ N G PT P + S P+ PQ
Sbjct: 64 SNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLPTYQL------SETSYQPTAIPQAV 117
Query: 162 MDPTD 166
DP+
Sbjct: 118 SDPSS 122
>gi|33589354|gb|AAQ22444.1| RE60081p [Drosophila melanogaster]
Length = 275
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK +RNRT+F++ Q+ LEK FERTHYPD F RE LA K+ L EAR+QVWF NRRAK+RR
Sbjct: 115 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRR 174
Query: 116 EEKLRNQRQRGSADPTQAPNNNNNNI 141
E+ R P P +NN+
Sbjct: 175 NERSVGSRTLLDTAPQLVPAPISNNM 200
>gi|410954493|ref|XP_003983899.1| PREDICTED: visual system homeobox 1 [Felis catus]
Length = 364
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 45 PEDDQARLRL-----KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPE 99
P +D++ L++ KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE
Sbjct: 146 PFEDRSDLKVSPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPE 205
Query: 100 ARIQVWFSNRRAKWRREEK 118
RIQVWF NRRAKWR+ EK
Sbjct: 206 DRIQVWFQNRRAKWRKREK 224
>gi|156356366|ref|XP_001623896.1| predicted protein [Nematostella vectensis]
gi|156210636|gb|EDO31796.1| predicted protein [Nematostella vectensis]
Length = 93
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Query: 43 LEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARI 102
LE +D A KRK +R RT+FT+ Q++ LE+ F +THYPDVF RE LA KI L EAR+
Sbjct: 20 LEGKDSTA----KRKQRRYRTTFTSYQLEELERAFAKTHYPDVFTREALAVKIDLTEARV 75
Query: 103 QVWFSNRRAKWRREEK 118
QVWF NRRAKWR+ EK
Sbjct: 76 QVWFQNRRAKWRKREK 91
>gi|296490338|tpg|DAA32451.1| TPA: short stature homeobox-like isoform 1 [Bos taurus]
Length = 294
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 19/141 (13%)
Query: 16 TDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
T+K +L GS I D + +++ ED+ + +LK++ R+RT+FT +Q++ LE+
Sbjct: 79 TEKDKLKEFGSGRAAEGIYDCKDKRDDVKSEDEDGQTKLKQR--RSRTNFTLEQLNELER 136
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
F+ THYPD F RE L+ ++GL EAR+QVWF NRRAK R++E N
Sbjct: 137 LFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQE-----------------N 179
Query: 136 NNNNNIVNNNNNSSDGCTPSP 156
+N+++ + D C +P
Sbjct: 180 QMHNSVILGTASHLDACRVAP 200
>gi|47230477|emb|CAF99670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 263
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 66 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 125
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 126 KRERFGQMQQ 135
>gi|109508442|ref|XP_001063896.1| PREDICTED: intestine-specific homeobox-like [Rattus norvegicus]
gi|392354889|ref|XP_003751881.1| PREDICTED: intestine-specific homeobox-like [Rattus norvegicus]
gi|149032479|gb|EDL87370.1| rCG39109 [Rattus norvegicus]
Length = 240
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Query: 40 GSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
GS LE P DQ + K K +R RT+FT +Q+ LEK F THYPD+ R +LA++I LP
Sbjct: 60 GSKLEKPTQDQPQEERKNK-RRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLP 118
Query: 99 EARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPNNNNNNIVNNNNNSSDGCTPSPAP 158
EAR+Q+WF N+RAKWR++EK GS Q P + + +N + TP+ P
Sbjct: 119 EARVQIWFQNQRAKWRKQEK------SGSLSAPQQPGEVSLALPSNMDMLGPVLTPTALP 172
Query: 159 QVSMDPTD 166
+ + PT+
Sbjct: 173 TL-VPPTE 179
>gi|406719564|dbj|BAM45081.1| dorsal root ganglia homeobox, partial [Gallus gallus]
Length = 156
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 7/76 (9%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 21 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 80
Query: 114 RREEKLRNQRQRGSAD 129
R+ E RGS+D
Sbjct: 81 RKTE-------RGSSD 89
>gi|391327510|ref|XP_003738241.1| PREDICTED: paired box protein Pax-7-like [Metaseiulus occidentalis]
Length = 665
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 53/70 (75%)
Query: 47 DDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWF 106
D + + LKRK +R+RT+FT Q+D LEK FERT YPDV+ RE L + L EAR+QVWF
Sbjct: 344 DGEVGITLKRKQRRSRTTFTAQQLDELEKAFERTQYPDVYTREELGQRTRLTEARVQVWF 403
Query: 107 SNRRAKWRRE 116
SNRRA+WR++
Sbjct: 404 SNRRARWRKQ 413
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 61/94 (64%), Gaps = 12/94 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 280 GEDSVCLSAGSDSEEG------------MLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 327
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK
Sbjct: 328 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 361
>gi|297708704|ref|XP_002831098.1| PREDICTED: intestine-specific homeobox [Pongo abelii]
Length = 245
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 40 GSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
GS LE P DQ + K K +R RT+FT +Q+ LEK F THYPDV R +LAA+I LP
Sbjct: 64 GSGLEKPRKDQPQEGRKSK-RRVRTTFTTEQLHELEKIFHYTHYPDVHIRSQLAARINLP 122
Query: 99 EARIQVWFSNRRAKWRREEKLRN 121
EAR+Q+WF N+RAKWR++EK+ N
Sbjct: 123 EARVQIWFQNQRAKWRKQEKIGN 145
>gi|300796730|ref|NP_001178475.1| short stature homeobox protein [Bos taurus]
gi|296490337|tpg|DAA32450.1| TPA: short stature homeobox-like isoform 2 [Bos taurus]
Length = 306
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 19/141 (13%)
Query: 16 TDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEK 75
T+K +L GS I D + +++ ED+ + +LK++ R+RT+FT +Q++ LE+
Sbjct: 79 TEKDKLKEFGSGRAAEGIYDCKDKRDDVKSEDEDGQTKLKQR--RSRTNFTLEQLNELER 136
Query: 76 EFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQRGSADPTQAPN 135
F+ THYPD F RE L+ ++GL EAR+QVWF NRRAK R++E N
Sbjct: 137 LFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQE-----------------N 179
Query: 136 NNNNNIVNNNNNSSDGCTPSP 156
+N+++ + D C +P
Sbjct: 180 QMHNSVILGTASHLDACRVAP 200
>gi|219660952|gb|ACL30968.1| visual system homeobox [Carassius auratus]
gi|229424351|gb|ACQ63564.1| transcription factor VSX1 [Carassius auratus]
Length = 344
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT+ Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWR 207
Query: 115 REEK 118
+ EK
Sbjct: 208 KREK 211
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 61/94 (64%), Gaps = 12/94 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 307 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 354
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK
Sbjct: 355 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 388
>gi|348540080|ref|XP_003457516.1| PREDICTED: visual system homeobox 1-like [Oreochromis niloticus]
Length = 306
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT+ Q++ LEK F+ HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 96 KRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWR 155
Query: 115 REEK 118
+ EK
Sbjct: 156 KREK 159
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 61/94 (64%), Gaps = 12/94 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 311 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 358
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK
Sbjct: 359 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 392
>gi|3024855|sp|Q90277.1|VSX1_CARAU RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
protein VSX-1; AltName: Full=Transcription factor VSX1
gi|460928|gb|AAC24600.1| Vsx-1 homeobox protein [Carassius auratus]
Length = 341
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT+ Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 145 KRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWR 204
Query: 115 REEK 118
+ EK
Sbjct: 205 KREK 208
>gi|148230462|ref|NP_001090191.1| visual system homeobox 1 [Xenopus laevis]
gi|123905790|sp|Q0P031.1|VSX1_XENLA RecName: Full=Visual system homeobox 1; AltName: Full=Transcription
factor vsx1; AltName: Full=Xvsx1
gi|84104901|gb|ABC54559.1| visual system homeobox 1 protein [Xenopus laevis]
Length = 344
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 48/64 (75%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT Q+D LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 147 KRKKRRHRTVFTAHQLDELEKSFNEAHYPDVYAREMLALKTELPEDRIQVWFQNRRAKWR 206
Query: 115 REEK 118
+ EK
Sbjct: 207 KREK 210
>gi|395857545|ref|XP_003801152.1| PREDICTED: visual system homeobox 1 [Otolemur garnettii]
Length = 365
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 48/64 (75%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWR 220
Query: 115 REEK 118
+ EK
Sbjct: 221 KREK 224
>gi|391338110|ref|XP_003743404.1| PREDICTED: uncharacterized protein LOC100901399 [Metaseiulus
occidentalis]
Length = 789
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 53/67 (79%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
++R +RNRT+FT Q++ LE+ F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 294 VRRGQRRNRTTFTVQQLEELERAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 353
Query: 114 RREEKLR 120
R+ E+L+
Sbjct: 354 RKAERLK 360
>gi|432852270|ref|XP_004067164.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 174 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 233
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 234 KRERFGQMQQ 243
>gi|195585928|ref|XP_002082730.1| GD25082 [Drosophila simulans]
gi|194194739|gb|EDX08315.1| GD25082 [Drosophila simulans]
Length = 275
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK +RNRT+F++ Q+ LEK FERTHYPD F RE LA K+ L EAR+QVWF NRRAK+RR
Sbjct: 115 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRR 174
Query: 116 EEKLRNQRQRGSADPTQAPNNNNNNI 141
E+ R P P +NN+
Sbjct: 175 NERSVGSRPLLDTAPQLVPAPISNNM 200
>gi|391331999|ref|XP_003740426.1| PREDICTED: uncharacterized protein LOC100907788 [Metaseiulus
occidentalis]
Length = 330
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 53/63 (84%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+++Q+ LE+EF++THYP V RERLA K GL EAR+QVWFSNRRAKWRR
Sbjct: 256 KFRRNRTTFSSEQLGILEEEFDKTHYPCVDTRERLATKTGLSEARVQVWFSNRRAKWRRH 315
Query: 117 EKL 119
+++
Sbjct: 316 QRM 318
>gi|327259725|ref|XP_003214686.1| PREDICTED: homeobox protein aristaless-like 4-like [Anolis
carolinensis]
Length = 337
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 139 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 198
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 199 KRERFGQMQQ 208
>gi|47222353|emb|CAG05102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 10/93 (10%)
Query: 26 SDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDV 85
SDE C + ++S +N + KRK +R+RT FT+ Q++ LEK F+ HYPDV
Sbjct: 135 SDEECLSDRNDSKSSANSQ----------KRKKRRHRTVFTSHQLEELEKAFQEAHYPDV 184
Query: 86 FARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
+ARE LA K LPE RIQVWF NRRAKWR+ EK
Sbjct: 185 YAREMLAMKTELPEDRIQVWFQNRRAKWRKREK 217
>gi|328717151|ref|XP_003246132.1| PREDICTED: paired mesoderm homeobox protein 1-like [Acyrthosiphon
pisum]
Length = 244
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%)
Query: 15 TTDKIELDGLGSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLE 74
T I++ G C T G S+ G + + + K K +RNRT+F++ Q+ LE
Sbjct: 3 THPVIQVSGAIDAGRCLTSGHVSDCGQPAPQTNSETDSQRKSKPRRNRTTFSSCQLRALE 62
Query: 75 KEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
K FERTHYPD F RE LA ++ L EAR+QVWF NRRAK+RR E+
Sbjct: 63 KVFERTHYPDAFVREELARRVCLSEARVQVWFQNRRAKFRRNER 106
>gi|301508010|gb|ADK77973.1| aristaless-related homeobox protein [Macropus eugenii]
Length = 552
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 12/98 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q+ LE+ F++TH PD
Sbjct: 297 GEDSMCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLLELERAFQKTHCPD 344
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQ 122
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK Q
Sbjct: 345 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 382
>gi|170033842|ref|XP_001844785.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874862|gb|EDS38245.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 380
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F + Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNSLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKW 60
Query: 114 RREEK 118
R+ EK
Sbjct: 61 RKNEK 65
>gi|122892625|gb|ABM67377.1| ALX4 [Hylobates klossii]
Length = 144
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 13/113 (11%)
Query: 22 DGLGSDETCTTIGDNSNPG----------SNLEPEDDQARLRLKRKLQRNRTSFTNDQID 71
D +G D + ++ + G S LE D ++ K K +RNRT+FT+ Q++
Sbjct: 13 DTVGMDSSYLSVKEAGVKGPQDRASSDLPSPLEKADSESN---KGKKRRNRTTFTSYQLE 69
Query: 72 NLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR+ E+ +Q
Sbjct: 70 ELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQ 122
>gi|301615770|ref|XP_002937332.1| PREDICTED: homeobox protein aristaless-like 4-like [Xenopus
(Silurana) tropicalis]
Length = 360
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR
Sbjct: 183 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 242
Query: 115 REEKLRNQRQ 124
+ E+ +Q
Sbjct: 243 KRERFGQMQQ 252
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 61/94 (64%), Gaps = 12/94 (12%)
Query: 25 GSDETCTTIGDNSNPGSNLEPEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPD 84
G D C + G +S G LKRK +R RT+FT+ Q++ LE+ F++THYPD
Sbjct: 307 GEDSVCLSAGSDSEEG------------LLKRKQRRYRTTFTSYQLEELERAFQKTHYPD 354
Query: 85 VFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
VF RE LA ++ L EAR+QVWF NRRAKWR+ EK
Sbjct: 355 VFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 388
>gi|297260462|ref|XP_002798304.1| PREDICTED: visual system homeobox 1-like, partial [Macaca mulatta]
Length = 354
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 48/64 (75%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 150 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWR 209
Query: 115 REEK 118
+ EK
Sbjct: 210 KREK 213
>gi|443733445|gb|ELU17800.1| hypothetical protein CAPTEDRAFT_30032, partial [Capitella teleta]
Length = 67
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K++RNRT+F+ Q+ LE+ F +THYPD+F RE+LA +I LPE+RIQVWF NRRAKWR+
Sbjct: 6 KVKRNRTTFSTKQLHELERAFRKTHYPDIFMREKLAMRINLPESRIQVWFQNRRAKWRKR 65
Query: 117 EK 118
EK
Sbjct: 66 EK 67
>gi|341903512|gb|EGT59447.1| hypothetical protein CAEBREN_29597 [Caenorhabditis brenneri]
Length = 365
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 6/86 (6%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA ++ L EAR+QVWF NRRAK+R
Sbjct: 114 KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYR 173
Query: 115 REEKLRNQRQRGSADPTQAPNNNNNN 140
++E+ + P QAP +N+
Sbjct: 174 KQER------SSTHHPYQAPMTISNS 193
>gi|195493839|ref|XP_002094585.1| GE20121 [Drosophila yakuba]
gi|194180686|gb|EDW94297.1| GE20121 [Drosophila yakuba]
Length = 680
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Query: 57 KLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRRE 116
K +RNRT+F+ +Q++ LEKEF+++HYP V RERL+++ L EAR+QVWFSNRRAKWRR
Sbjct: 351 KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRH 410
Query: 117 EKL-RNQRQRGS-ADPTQAPNNNN 138
+++ +RQR S A+P + +N+
Sbjct: 411 QRMNLLKRQRSSPANPLHSQQSND 434
>gi|432116877|gb|ELK37464.1| Retina and anterior neural fold homeobox protein 2 [Myotis davidii]
Length = 184
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 54/67 (80%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
+++ +RNRT+FT Q+ LE+ FE +HYPD+++RE LAAK+ LPE R+QVWF NRRAKWR
Sbjct: 24 RKQHRRNRTTFTTYQLHQLERAFEASHYPDIYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 115 REEKLRN 121
+E+L +
Sbjct: 84 HQERLES 90
>gi|195346972|ref|XP_002040028.1| GM15584 [Drosophila sechellia]
gi|194135377|gb|EDW56893.1| GM15584 [Drosophila sechellia]
Length = 273
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK +RNRT+F++ Q+ LEK FERTHYPD F RE LA K+ L EAR+QVWF NRRAK+RR
Sbjct: 115 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRR 174
Query: 116 EEKLRNQRQRGSADPTQAPNNNNNNI 141
E+ R P P +NN+
Sbjct: 175 NERSVGSRPLLDTAPQLVPAPISNNM 200
>gi|114681337|ref|XP_001149985.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan troglodytes]
gi|397518460|ref|XP_003829404.1| PREDICTED: visual system homeobox 1 isoform 1 [Pan paniscus]
Length = 365
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 48/64 (75%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWR 220
Query: 115 REEK 118
+ EK
Sbjct: 221 KREK 224
>gi|85566894|gb|AAI12213.1| Intestine-specific homeobox [Homo sapiens]
gi|109730569|gb|AAI13634.1| Intestine-specific homeobox [Homo sapiens]
gi|119580451|gb|EAW60047.1| RAX-like homeobox [Homo sapiens]
gi|169118061|dbj|BAG12059.1| pancreas-intestine homeodomain transcription factor [Homo sapiens]
gi|313882800|gb|ADR82886.1| intestine-specific homeobox (ISX) [synthetic construct]
Length = 245
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 40 GSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
GS LE P DQ + K K +R RT+FT +Q+ LEK F THYPDV R +LAA+I LP
Sbjct: 64 GSGLEKPPKDQPQEGRKSK-RRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLP 122
Query: 99 EARIQVWFSNRRAKWRREEKLRN 121
EAR+Q+WF N+RAKWR++EK+ N
Sbjct: 123 EARVQIWFQNQRAKWRKQEKIGN 145
>gi|268578085|ref|XP_002644025.1| C. briggsae CBR-ALR-1 protein [Caenorhabditis briggsae]
Length = 360
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA ++ L EAR+QVWF NRRAK+R
Sbjct: 116 KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYR 175
Query: 115 REEKLRNQRQRGSADPTQAPNN 136
++E+ + P QAP N
Sbjct: 176 KQER------SSTHHPYQAPLN 191
>gi|16508152|gb|AAL18165.1| paired box transcription factor Pax6 [Ctenophorus ornatus]
Length = 99
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Query: 34 GDNSNPGSNLEPEDDQARLR--LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERL 91
G+N+N S+ + Q ++ LKRKL RNRTSFT +QI+ LEKEFERTHYPDVFARERL
Sbjct: 28 GENTNSISSNGEDSTQTPMKSSLKRKLHRNRTSFTQEQIEALEKEFERTHYPDVFARERL 87
Query: 92 AAKIGLPEARIQ 103
AAKI LPEARIQ
Sbjct: 88 AAKIDLPEARIQ 99
>gi|11056038|ref|NP_055403.2| visual system homeobox 1 isoform a [Homo sapiens]
gi|25009572|sp|Q9NZR4.2|VSX1_HUMAN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802263|gb|AAF99656.1|AF251033_1 homeodomain protein RINX, L1 isoform [Homo sapiens]
gi|11055960|gb|AAF37425.2|AF176797_1 transcription factor VSX1 [Homo sapiens]
gi|112820184|gb|ABI23973.1| visual system homeobox 1 transcript variant 1 [Homo sapiens]
gi|116496989|gb|AAI26229.1| Visual system homeobox 1 [Homo sapiens]
gi|119630509|gb|EAX10104.1| visual system homeobox 1 homolog, CHX10-like (zebrafish), isoform
CRA_a [Homo sapiens]
gi|223460502|gb|AAI36498.1| Visual system homeobox 1 [Homo sapiens]
Length = 365
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 48/64 (75%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWR 220
Query: 115 REEK 118
+ EK
Sbjct: 221 KREK 224
>gi|121484123|gb|ABM54404.1| ALX4 [Pan paniscus]
Length = 146
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 13/113 (11%)
Query: 22 DGLGSDETCTTIGDNSNPG----------SNLEPEDDQARLRLKRKLQRNRTSFTNDQID 71
D +G D + ++ + G S LE D ++ K K +RNRT+FT+ Q++
Sbjct: 15 DTVGMDSSYLSVKEAGVKGPQDRASSDLPSPLEKADSESN---KGKKRRNRTTFTSYQLE 71
Query: 72 NLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKLRNQRQ 124
LEK F++THYPDV+ARE+LA + L EAR+QVWF NRRAKWR+ E+ +Q
Sbjct: 72 ELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQ 124
>gi|345327987|ref|XP_001508209.2| PREDICTED: dorsal root ganglia homeobox protein-like, partial
[Ornithorhynchus anatinus]
Length = 173
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 51/65 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
L+RK +RNRT+FT Q++ LE F +THYPDVF RE LA KI L EAR+QVWF NRRAKW
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKW 88
Query: 114 RREEK 118
R+ E+
Sbjct: 89 RKTER 93
>gi|335304550|ref|XP_003359967.1| PREDICTED: visual system homeobox 1-like [Sus scrofa]
Length = 364
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 47 DDQARLRL-----KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEAR 101
+D++ L+L KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE R
Sbjct: 148 EDRSDLKLPPTPGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDR 207
Query: 102 IQVWFSNRRAKWRREEK 118
IQVWF NRRAKWR+ EK
Sbjct: 208 IQVWFQNRRAKWRKREK 224
>gi|297706526|ref|XP_002830085.1| PREDICTED: visual system homeobox 1 isoform 1 [Pongo abelii]
Length = 365
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 48/64 (75%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWR 220
Query: 115 REEK 118
+ EK
Sbjct: 221 KREK 224
>gi|157817853|ref|NP_001103016.1| visual system homeobox 1 [Rattus norvegicus]
gi|149031121|gb|EDL86148.1| rCG37439 [Rattus norvegicus]
Length = 369
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 24 LGSDETCTTIGDNSNPGSNLEPEDDQARLRL-KRKLQRNRTSFTNDQIDNLEKEFERTHY 82
LGS + I + + E D + L L KRK +R+RT FT Q++ LEK F HY
Sbjct: 133 LGSQQRSENISTSDGDSPSEEKNDPKMSLTLGKRKKRRHRTVFTAHQLEELEKAFGEAHY 192
Query: 83 PDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEK 118
PDV+ARE LA K LPE RIQVWF NRRAKWR+ EK
Sbjct: 193 PDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREK 228
>gi|114686104|ref|XP_001154843.1| PREDICTED: intestine-specific homeobox [Pan troglodytes]
gi|397501772|ref|XP_003821549.1| PREDICTED: intestine-specific homeobox [Pan paniscus]
Length = 245
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 40 GSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
GS LE P DQ + K K +R RT+FT +Q+ LEK F THYPDV R +LAA+I LP
Sbjct: 64 GSGLEKPPKDQPQEGRKSK-RRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLP 122
Query: 99 EARIQVWFSNRRAKWRREEKLRN 121
EAR+Q+WF N+RAKWR++EK+ N
Sbjct: 123 EARVQIWFQNQRAKWRKQEKIGN 145
>gi|296200374|ref|XP_002747576.1| PREDICTED: visual system homeobox 1 [Callithrix jacchus]
Length = 364
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 48/64 (75%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 160 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWR 219
Query: 115 REEK 118
+ EK
Sbjct: 220 KREK 223
>gi|402883434|ref|XP_003905223.1| PREDICTED: visual system homeobox 1 isoform 1 [Papio anubis]
Length = 365
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 48/64 (75%)
Query: 55 KRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWR 114
KRK +R+RT FT Q++ LEK F HYPDV+ARE LA K LPE RIQVWF NRRAKWR
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWR 220
Query: 115 REEK 118
+ EK
Sbjct: 221 KREK 224
>gi|157137459|ref|XP_001663998.1| hypothetical protein AaeL_AAEL013809 [Aedes aegypti]
gi|108869695|gb|EAT33920.1| AAEL013809-PA [Aedes aegypti]
Length = 358
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 54 LKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKW 113
+KRK +R RT+F + Q+ LE+ F+RTHYPDVF RE LA +I L EAR+QVWF NRRAKW
Sbjct: 1 MKRKQRRYRTTFNSLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 60
Query: 114 RREEK 118
R+ EK
Sbjct: 61 RKNEK 65
>gi|194756178|ref|XP_001960356.1| GF13323 [Drosophila ananassae]
gi|190621654|gb|EDV37178.1| GF13323 [Drosophila ananassae]
Length = 279
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 56/86 (65%)
Query: 56 RKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRR 115
RK +RNRT+F++ Q+ LEK FERTHYPD F RE LA K+ L EAR+QVWF NRRAK+RR
Sbjct: 119 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRR 178
Query: 116 EEKLRNQRQRGSADPTQAPNNNNNNI 141
E+ R P P NN+
Sbjct: 179 NERSVGSRPLLDPAPQLVPAPLGNNM 204
>gi|57232759|ref|NP_001008494.1| intestine-specific homeobox [Homo sapiens]
gi|150387849|sp|Q2M1V0.2|ISX_HUMAN RecName: Full=Intestine-specific homeobox; AltName: Full=RAX-like
homeobox
gi|51476470|emb|CAH18225.1| hypothetical protein [Homo sapiens]
gi|190690199|gb|ACE86874.1| intestine-specific homeobox protein [synthetic construct]
gi|190691575|gb|ACE87562.1| intestine-specific homeobox protein [synthetic construct]
gi|208966606|dbj|BAG73317.1| intestine-specific homeobox [synthetic construct]
Length = 245
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 40 GSNLE-PEDDQARLRLKRKLQRNRTSFTNDQIDNLEKEFERTHYPDVFARERLAAKIGLP 98
GS LE P DQ + K K +R RT+FT +Q+ LEK F THYPDV R +LAA+I LP
Sbjct: 64 GSGLEKPPKDQPQEGRKSK-RRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLP 122
Query: 99 EARIQVWFSNRRAKWRREEKLRN 121
EAR+Q+WF N+RAKWR++EK+ N
Sbjct: 123 EARVQIWFQNQRAKWRKQEKIGN 145
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.129 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,977,174,807
Number of Sequences: 23463169
Number of extensions: 125808906
Number of successful extensions: 999521
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18435
Number of HSP's successfully gapped in prelim test: 1689
Number of HSP's that attempted gapping in prelim test: 937260
Number of HSP's gapped (non-prelim): 56402
length of query: 169
length of database: 8,064,228,071
effective HSP length: 129
effective length of query: 40
effective length of database: 9,332,446,566
effective search space: 373297862640
effective search space used: 373297862640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 71 (32.0 bits)