BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4875
         (100 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|328719783|ref|XP_003246858.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Acyrthosiphon
           pisum]
 gi|328719787|ref|XP_003246860.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Acyrthosiphon
           pisum]
          Length = 613

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/64 (93%), Positives = 62/64 (96%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQEGVCSND
Sbjct: 124 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQEGVCSND 183

Query: 70  NIPS 73
           NIPS
Sbjct: 184 NIPS 187


>gi|328719785|ref|XP_003246859.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 594

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/64 (93%), Positives = 62/64 (96%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQEGVCSND
Sbjct: 105 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQEGVCSND 164

Query: 70  NIPS 73
           NIPS
Sbjct: 165 NIPS 168


>gi|195402299|ref|XP_002059744.1| eyeless [Drosophila virilis]
 gi|194155958|gb|EDW71142.1| eyeless [Drosophila virilis]
          Length = 906

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 151 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQESVCTND 210

Query: 70  NIPS 73
           NIPS
Sbjct: 211 NIPS 214


>gi|263359659|gb|ACY70495.1| hypothetical protein DVIR88_6g0032 [Drosophila virilis]
          Length = 909

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 151 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQESVCTND 210

Query: 70  NIPS 73
           NIPS
Sbjct: 211 NIPS 214


>gi|380013541|ref|XP_003690812.1| PREDICTED: proton-coupled amino acid transporter 2-like [Apis
           florea]
          Length = 537

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YK ECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 365 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTND 424

Query: 70  NIPS 73
           NIPS
Sbjct: 425 NIPS 428


>gi|195450767|ref|XP_002072624.1| GK13702 [Drosophila willistoni]
 gi|194168709|gb|EDW83610.1| GK13702 [Drosophila willistoni]
          Length = 951

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 151 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 210

Query: 70  NIPS 73
           NIPS
Sbjct: 211 NIPS 214


>gi|340728299|ref|XP_003402463.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
          Length = 826

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YK ECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 337 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTND 396

Query: 70  NIPS 73
           NIPS
Sbjct: 397 NIPS 400


>gi|195133952|ref|XP_002011402.1| GI14081 [Drosophila mojavensis]
 gi|193912025|gb|EDW10892.1| GI14081 [Drosophila mojavensis]
          Length = 891

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 150 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 209

Query: 70  NIPS 73
           NIPS
Sbjct: 210 NIPS 213


>gi|194768292|ref|XP_001966246.1| GF22818 [Drosophila ananassae]
 gi|190618548|gb|EDV34072.1| GF22818 [Drosophila ananassae]
          Length = 900

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 152 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 211

Query: 70  NIPS 73
           NIPS
Sbjct: 212 NIPS 215


>gi|350403203|ref|XP_003486730.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
          Length = 796

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YK ECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 301 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTND 360

Query: 70  NIPS 73
           NIPS
Sbjct: 361 NIPS 364


>gi|194913493|ref|XP_001982710.1| GG16399 [Drosophila erecta]
 gi|190647926|gb|EDV45229.1| GG16399 [Drosophila erecta]
          Length = 900

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 149 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 208

Query: 70  NIPS 73
           NIPS
Sbjct: 209 NIPS 212


>gi|195172576|ref|XP_002027073.1| ey [Drosophila persimilis]
 gi|194112851|gb|EDW34894.1| ey [Drosophila persimilis]
          Length = 896

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 146 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 205

Query: 70  NIPS 73
           NIPS
Sbjct: 206 NIPS 209


>gi|198462210|ref|XP_001352371.2| ey [Drosophila pseudoobscura pseudoobscura]
 gi|198139686|gb|EAL29360.2| ey [Drosophila pseudoobscura pseudoobscura]
          Length = 896

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 146 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 205

Query: 70  NIPS 73
           NIPS
Sbjct: 206 NIPS 209


>gi|270006446|gb|EFA02894.1| eyeless [Tribolium castaneum]
          Length = 453

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/64 (92%), Positives = 62/64 (96%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 57  ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISSYKRECPSIFAWEIRDRLLQEGVCTND 116

Query: 70  NIPS 73
           NIPS
Sbjct: 117 NIPS 120


>gi|160333791|ref|NP_001103907.1| eyeless [Tribolium castaneum]
 gi|158187657|gb|ABW23132.1| eyeless [Tribolium castaneum]
          Length = 453

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/64 (92%), Positives = 62/64 (96%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 57  ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISSYKRECPSIFAWEIRDRLLQEGVCTND 116

Query: 70  NIPS 73
           NIPS
Sbjct: 117 NIPS 120


>gi|195469385|ref|XP_002099618.1| GE14559 [Drosophila yakuba]
 gi|194185719|gb|EDW99330.1| GE14559 [Drosophila yakuba]
          Length = 898

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 149 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 208

Query: 70  NIPS 73
           NIPS
Sbjct: 209 NIPS 212


>gi|195354419|ref|XP_002043695.1| ey [Drosophila sechellia]
 gi|194128883|gb|EDW50926.1| ey [Drosophila sechellia]
          Length = 899

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 149 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 208

Query: 70  NIPS 73
           NIPS
Sbjct: 209 NIPS 212


>gi|62473159|ref|NP_001014693.1| eyeless, isoform D [Drosophila melanogaster]
 gi|61677928|gb|AAX52512.1| eyeless, isoform D [Drosophila melanogaster]
          Length = 898

 Score =  124 bits (311), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 149 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 208

Query: 70  NIPS 73
           NIPS
Sbjct: 209 NIPS 212


>gi|383210369|dbj|BAM08281.1| eyeless, partial [Gryllus bimaculatus]
          Length = 111

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 62/64 (96%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 47  ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQEGVCTND 106

Query: 70  NIPS 73
           NIP+
Sbjct: 107 NIPT 110


>gi|24638702|ref|NP_524628.2| eyeless, isoform A [Drosophila melanogaster]
 gi|7304285|gb|AAF59318.1| eyeless, isoform A [Drosophila melanogaster]
          Length = 838

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 89  ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 148

Query: 70  NIPS 73
           NIPS
Sbjct: 149 NIPS 152


>gi|641810|emb|CAA56038.1| transcription factor [Drosophila melanogaster]
          Length = 838

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 89  ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 148

Query: 70  NIPS 73
           NIPS
Sbjct: 149 NIPS 152


>gi|12643549|sp|O18381.3|PAX6_DROME RecName: Full=Paired box protein Pax-6; AltName: Full=Protein
           eyeless
          Length = 857

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 108 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 167

Query: 70  NIPS 73
           NIPS
Sbjct: 168 NIPS 171


>gi|62473168|ref|NP_001014694.1| eyeless, isoform C [Drosophila melanogaster]
 gi|61677929|gb|AAX52513.1| eyeless, isoform C [Drosophila melanogaster]
          Length = 857

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 108 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 167

Query: 70  NIPS 73
           NIPS
Sbjct: 168 NIPS 171


>gi|218505945|gb|ABG02193.2| IP14880p [Drosophila melanogaster]
          Length = 357

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 132 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 191

Query: 70  NIPS 73
           NIPS
Sbjct: 192 NIPS 195


>gi|8132381|gb|AAF73270.1| paired domain transcription factor variant B [Xenopus laevis]
          Length = 390

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+HYKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|1669587|dbj|BAA13680.1| Xenopus Pax-6 long [Xenopus laevis]
          Length = 421

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+HYKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|288557282|ref|NP_001165666.1| paired box protein Pax-6 [Xenopus laevis]
 gi|8132379|gb|AAF73269.1|AF154553_1 paired domain transcription factor variant B [Xenopus laevis]
          Length = 393

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+HYKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|1669589|dbj|BAA13681.1| Xenopus Pax-6 short [Xenopus laevis]
          Length = 370

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+HYKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|195564310|ref|XP_002105764.1| eyeless [Drosophila simulans]
 gi|194201639|gb|EDX15215.1| eyeless [Drosophila simulans]
          Length = 429

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/60 (95%), Positives = 58/60 (96%)

Query: 14  YYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIPS 73
           YYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+NDNIPS
Sbjct: 99  YYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPS 158


>gi|344245472|gb|EGW01576.1| Paired box protein Pax-6 [Cricetulus griseus]
          Length = 544

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 152 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 211

Query: 70  NIPS 73
           NIPS
Sbjct: 212 NIPS 215


>gi|5758937|gb|AAD50902.1|AF169413_1 paired-box transcription factor +- isoform, partial [Ambystoma
           mexicanum]
          Length = 404

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 68  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 127

Query: 70  NIPS 73
           NIPS
Sbjct: 128 NIPS 131


>gi|328779009|ref|XP_001120031.2| PREDICTED: hypothetical protein LOC724238 [Apis mellifera]
          Length = 897

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YK ECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 401 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTND 460

Query: 70  NIPS 73
           NIPS
Sbjct: 461 NIPS 464


>gi|345492062|ref|XP_001601318.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
          Length = 593

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YK ECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|1685047|gb|AAB36681.1| paired-type homeodomain Pax-6 protein [Xenopus laevis]
          Length = 453

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+HYKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 87  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTND 146

Query: 70  NIPS 73
           NIPS
Sbjct: 147 NIPS 150


>gi|68304557|gb|AAY89857.1| eyeless [Drosophila simulans]
 gi|68304559|gb|AAY89858.1| eyeless [Drosophila melanogaster]
          Length = 115

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 52  ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 111

Query: 70  NIPS 73
           NIPS
Sbjct: 112 NIPS 115


>gi|410045098|ref|XP_003954413.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6 [Pan
           troglodytes]
          Length = 430

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 64  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 123

Query: 70  NIPS 73
           NIPS
Sbjct: 124 NIPS 127


>gi|395742931|ref|XP_003777840.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6 [Pongo
           abelii]
          Length = 421

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|332211111|ref|XP_003254659.1| PREDICTED: paired box protein Pax-6 [Nomascus leucogenys]
          Length = 458

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 92  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 151

Query: 70  NIPS 73
           NIPS
Sbjct: 152 NIPS 155


>gi|1488322|gb|AAB05932.1| Xpax6 [Xenopus laevis]
          Length = 422

 Score =  122 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+HYKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|2495315|sp|P55864.1|PAX6_XENLA RecName: Full=Paired box protein Pax-6
 gi|1685056|gb|AAB36683.1| Pax6 [Xenopus laevis]
          Length = 422

 Score =  122 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+HYKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|353232519|emb|CCD79874.1| putative paired box protein pax-6 [Schistosoma mansoni]
          Length = 1368

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 13/95 (13%)

Query: 6   LLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGV 65
           +LC    RYYETGSIRP+AIGGSKPRVAT  VV KI+HYKRECPSIFAWEIRDRLLQEG+
Sbjct: 60  ILC----RYYETGSIRPKAIGGSKPRVATNLVVLKIAHYKRECPSIFAWEIRDRLLQEGI 115

Query: 66  CSNDNIPSRECPSIFAWEIRDRLLQEGVCSNDNIP 100
           C+ +NIPS    SI      +R+L+  VC+++ +P
Sbjct: 116 CTTENIPS--VSSI------NRVLRN-VCNDNQLP 141


>gi|2696971|dbj|BAA24024.1| PAX6 LL [Cynops pyrrhogaster]
          Length = 452

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 87  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 146

Query: 70  NIPS 73
           NIPS
Sbjct: 147 NIPS 150


>gi|119588639|gb|EAW68233.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
           sapiens]
 gi|119588640|gb|EAW68234.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
           sapiens]
          Length = 456

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 90  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 149

Query: 70  NIPS 73
           NIPS
Sbjct: 150 NIPS 153


>gi|18138032|emb|CAC80518.1| paired box protein [Mus musculus]
          Length = 309

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 61/67 (91%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC
Sbjct: 67  VSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVC 126

Query: 67  SNDNIPS 73
           +NDNIPS
Sbjct: 127 TNDNIPS 133


>gi|338727409|ref|XP_001918200.2| PREDICTED: paired box protein Pax-6 [Equus caballus]
          Length = 395

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|444301229|gb|AGD98725.1| paired box 6.1 [Callorhinchus milii]
          Length = 436

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|355566635|gb|EHH23014.1| hypothetical protein EGK_06384 [Macaca mulatta]
          Length = 361

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 11 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 70

Query: 70 NIPS 73
          NIPS
Sbjct: 71 NIPS 74


>gi|242009926|ref|XP_002425733.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
 gi|212509634|gb|EEB12995.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
          Length = 229

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKIS +KRECPSIFAWEIRDRLLQEG+C+ND
Sbjct: 61  ILGRYYETGSIRPRAIGGSKPRVATTEVVSKISQFKRECPSIFAWEIRDRLLQEGICTND 120

Query: 70  NIPS 73
           NIPS
Sbjct: 121 NIPS 124


>gi|5758941|gb|AAD50904.1|AF169415_1 paired-box transcription factor -- isoform, partial [Ambystoma
           mexicanum]
          Length = 390

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 54  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 113

Query: 70  NIPS 73
           NIPS
Sbjct: 114 NIPS 117


>gi|5758935|gb|AAD50901.1|AF169412_1 paired-box transcription factor ++ isoform, partial [Ambystoma
           mexicanum]
          Length = 433

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 68  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 127

Query: 70  NIPS 73
           NIPS
Sbjct: 128 NIPS 131


>gi|402893913|ref|XP_003910125.1| PREDICTED: paired box protein Pax-6 isoform 4 [Papio anubis]
 gi|402893915|ref|XP_003910126.1| PREDICTED: paired box protein Pax-6 isoform 5 [Papio anubis]
 gi|402893919|ref|XP_003910128.1| PREDICTED: paired box protein Pax-6 isoform 7 [Papio anubis]
 gi|402893921|ref|XP_003910129.1| PREDICTED: paired box protein Pax-6 isoform 8 [Papio anubis]
          Length = 436

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|325973715|emb|CBX88048.1| Pax6 transcription factor [Scyliorhinus canicula]
          Length = 497

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 131 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 190

Query: 70  NIPS 73
           NIPS
Sbjct: 191 NIPS 194


>gi|432860293|ref|XP_004069487.1| PREDICTED: paired box protein Pax-6-like [Oryzias latipes]
          Length = 433

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EGVCSND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLAEGVCSND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|440910049|gb|ELR59881.1| Paired box protein Pax-6, partial [Bos grunniens mutus]
          Length = 436

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|7305369|ref|NP_038655.1| paired box protein Pax-6 isoform 1 [Mus musculus]
 gi|346644677|ref|NP_001231127.1| paired box protein Pax-6 isoform 1 [Mus musculus]
 gi|346644705|ref|NP_001231129.1| paired box protein Pax-6 isoform 1 [Mus musculus]
 gi|354470765|ref|XP_003497615.1| PREDICTED: paired box protein Pax-6 isoform 2 [Cricetulus griseus]
 gi|1405744|emb|CAA45379.1| Pax-6 (paired box containing gene) [Mus musculus]
 gi|15277449|gb|AAH11272.1| Paired box gene 6 [Mus musculus]
 gi|18138034|emb|CAC80519.1| paired box protein [Mus musculus]
 gi|148695799|gb|EDL27746.1| paired box gene 6, isoform CRA_b [Mus musculus]
 gi|148695802|gb|EDL27749.1| paired box gene 6, isoform CRA_b [Mus musculus]
          Length = 436

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|355752241|gb|EHH56361.1| hypothetical protein EGM_05752, partial [Macaca fascicularis]
          Length = 436

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|281350934|gb|EFB26518.1| hypothetical protein PANDA_005849 [Ailuropoda melanoleuca]
          Length = 434

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 68  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 127

Query: 70  NIPS 73
           NIPS
Sbjct: 128 NIPS 131


>gi|148222721|ref|NP_001091013.1| paired box gene 6 [Canis lupus familiaris]
 gi|344281158|ref|XP_003412347.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Loxodonta
           africana]
 gi|426245242|ref|XP_004016422.1| PREDICTED: paired box protein Pax-6 isoform 5 [Ovis aries]
 gi|426245244|ref|XP_004016423.1| PREDICTED: paired box protein Pax-6 isoform 6 [Ovis aries]
 gi|426245246|ref|XP_004016424.1| PREDICTED: paired box protein Pax-6 isoform 7 [Ovis aries]
 gi|426245248|ref|XP_004016425.1| PREDICTED: paired box protein Pax-6 isoform 8 [Ovis aries]
 gi|134289886|gb|ABO70134.1| PAX6 [Canis lupus familiaris]
          Length = 436

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|4580424|ref|NP_001595.2| paired box protein Pax-6 isoform b [Homo sapiens]
 gi|386642911|ref|NP_001245391.1| paired box protein Pax-6 isoform b [Homo sapiens]
 gi|386642913|ref|NP_001245392.1| paired box protein Pax-6 isoform b [Homo sapiens]
 gi|301764208|ref|XP_002917525.1| PREDICTED: paired box protein Pax-6-like [Ailuropoda melanoleuca]
 gi|390470364|ref|XP_002755188.2| PREDICTED: paired box protein Pax-6 isoform 1 [Callithrix jacchus]
 gi|390470366|ref|XP_003734277.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
 gi|390470368|ref|XP_003734278.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
 gi|397520715|ref|XP_003830457.1| PREDICTED: paired box protein Pax-6 isoform 4 [Pan paniscus]
 gi|397520717|ref|XP_003830458.1| PREDICTED: paired box protein Pax-6 isoform 5 [Pan paniscus]
 gi|397520719|ref|XP_003830459.1| PREDICTED: paired box protein Pax-6 isoform 6 [Pan paniscus]
 gi|403254508|ref|XP_003920007.1| PREDICTED: paired box protein Pax-6 isoform 4 [Saimiri boliviensis
           boliviensis]
 gi|403254510|ref|XP_003920008.1| PREDICTED: paired box protein Pax-6 isoform 5 [Saimiri boliviensis
           boliviensis]
 gi|403254512|ref|XP_003920009.1| PREDICTED: paired box protein Pax-6 isoform 6 [Saimiri boliviensis
           boliviensis]
 gi|410973488|ref|XP_003993181.1| PREDICTED: paired box protein Pax-6 isoform 4 [Felis catus]
 gi|410973490|ref|XP_003993182.1| PREDICTED: paired box protein Pax-6 isoform 5 [Felis catus]
 gi|410973492|ref|XP_003993183.1| PREDICTED: paired box protein Pax-6 isoform 6 [Felis catus]
 gi|410973494|ref|XP_003993184.1| PREDICTED: paired box protein Pax-6 isoform 7 [Felis catus]
 gi|426367844|ref|XP_004050931.1| PREDICTED: paired box protein Pax-6 isoform 4 [Gorilla gorilla
           gorilla]
 gi|426367846|ref|XP_004050932.1| PREDICTED: paired box protein Pax-6 isoform 5 [Gorilla gorilla
           gorilla]
 gi|426367850|ref|XP_004050934.1| PREDICTED: paired box protein Pax-6 isoform 7 [Gorilla gorilla
           gorilla]
 gi|326205307|dbj|BAJ84032.1| paired box protein Pax-6 [Homo sapiens]
 gi|326205309|dbj|BAJ84033.1| paired box protein Pax-6 [Homo sapiens]
 gi|326205311|dbj|BAJ84034.1| paired box protein Pax-6 [Homo sapiens]
 gi|380813236|gb|AFE78492.1| paired box protein Pax-6 isoform b [Macaca mulatta]
          Length = 436

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|345305654|ref|XP_003428362.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6-like
           [Ornithorhynchus anatinus]
          Length = 704

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 323 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 382

Query: 70  NIPS 73
           NIPS
Sbjct: 383 NIPS 386


>gi|269200156|gb|ACZ28705.1| paired box protein 6 isoform c [Homo sapiens]
          Length = 401

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|269931719|gb|ACZ54379.1| paired box 6 [Monodelphis domestica]
          Length = 282

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 61/67 (91%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC
Sbjct: 57  VSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVC 116

Query: 67  SNDNIPS 73
           +NDNIPS
Sbjct: 117 TNDNIPS 123


>gi|45384210|ref|NP_990397.1| paired box protein Pax-6 [Gallus gallus]
 gi|2576237|dbj|BAA23004.1| PAX6 protein [Gallus gallus]
 gi|115501595|gb|ABI98845.1| paired box 6 [Columba livia]
 gi|115501597|gb|ABI98846.1| paired box 6 transcript variant 1 [Columba livia]
          Length = 436

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|348557450|ref|XP_003464532.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Cavia
           porcellus]
          Length = 436

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|49902846|gb|AAH76068.1| Pax6b protein [Danio rerio]
          Length = 384

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 55/64 (85%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|149022829|gb|EDL79723.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
 gi|149022831|gb|EDL79725.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
          Length = 470

 Score =  121 bits (303), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 104 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 163

Query: 70  NIPS 73
           NIPS
Sbjct: 164 NIPS 167


>gi|126723718|ref|NP_001075686.1| paired box protein Pax-6 [Oryctolagus cuniculus]
 gi|77547037|gb|ABA90485.1| paired box protein PAX6 isoform b [Oryctolagus cuniculus]
          Length = 436

 Score =  121 bits (303), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|449501716|ref|XP_004176235.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
           [Taeniopygia guttata]
          Length = 546

 Score =  121 bits (303), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 205 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 264

Query: 70  NIPS 73
           NIPS
Sbjct: 265 NIPS 268


>gi|254733064|gb|ACT79977.1| eyeless, partial [Nasonia vitripennis]
          Length = 225

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YK ECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 54  ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTND 113

Query: 70  NIPS 73
           NIPS
Sbjct: 114 NIPS 117


>gi|44922124|gb|AAS48919.1| paired box 6 isoform 5a [Rattus norvegicus]
 gi|44922126|gb|AAS48920.1| paired box 6 isoform 5a [Rattus norvegicus]
          Length = 436

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|34364871|emb|CAE45868.1| hypothetical protein [Homo sapiens]
          Length = 436

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|115501599|gb|ABI98847.1| paired box 6 transcript variant 2 [Columba livia]
          Length = 430

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|18138028|emb|CAC80516.1| paired box protein [Mus musculus]
          Length = 436

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|331271830|gb|AED02520.1| paired box 6 protein [Coturnix japonica]
          Length = 281

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 56/61 (91%), Positives = 58/61 (95%)

Query: 13 RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
          RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+NDNIP
Sbjct: 1  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 60

Query: 73 S 73
          S
Sbjct: 61 S 61


>gi|1663646|gb|AAC18658.1| Pax6 [Bos taurus]
          Length = 146

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|42592306|emb|CAF29075.1| putative pax6 isoform 5a [Rattus norvegicus]
          Length = 436

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|306754627|gb|ADN04686.1| Pax6 [Rattus norvegicus]
          Length = 434

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|307182411|gb|EFN69647.1| Paired box protein Pax-6 [Camponotus floridanus]
          Length = 206

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/64 (89%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVV+KIS YK ECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATAEVVNKISLYKSECPSIFAWEIRDRLLQEGVCTND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|148695801|gb|EDL27748.1| paired box gene 6, isoform CRA_d [Mus musculus]
          Length = 499

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 133 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 192

Query: 70  NIPS 73
           NIPS
Sbjct: 193 NIPS 196


>gi|109288051|gb|ABG29069.1| transcription factor Pax6 [Pleurodeles waltl]
          Length = 214

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 2  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 61

Query: 70 NIPS 73
          NIPS
Sbjct: 62 NIPS 65


>gi|189353|gb|AAA59962.1| oculorhombin [Homo sapiens]
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|5758939|gb|AAD50903.1|AF169414_1 paired-box transcription factor -+ isoform, partial [Ambystoma
           mexicanum]
          Length = 419

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 54  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 113

Query: 70  NIPS 73
           NIPS
Sbjct: 114 NIPS 117


>gi|18138024|emb|CAC80514.1| paired box protein [Mus musculus]
          Length = 292

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 61/67 (91%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC
Sbjct: 67  VSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVC 126

Query: 67  SNDNIPS 73
           +NDNIPS
Sbjct: 127 TNDNIPS 133


>gi|327259827|ref|XP_003214737.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Anolis
           carolinensis]
          Length = 436

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|18138026|emb|CAC80515.1| paired box protein [Mus musculus]
          Length = 157

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 61/67 (91%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC
Sbjct: 67  VSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVC 126

Query: 67  SNDNIPS 73
           +NDNIPS
Sbjct: 127 TNDNIPS 133


>gi|383296|prf||1902328A PAX6 gene
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|402893907|ref|XP_003910122.1| PREDICTED: paired box protein Pax-6 isoform 1 [Papio anubis]
 gi|402893909|ref|XP_003910123.1| PREDICTED: paired box protein Pax-6 isoform 2 [Papio anubis]
 gi|402893911|ref|XP_003910124.1| PREDICTED: paired box protein Pax-6 isoform 3 [Papio anubis]
 gi|402893917|ref|XP_003910127.1| PREDICTED: paired box protein Pax-6 isoform 6 [Papio anubis]
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|395543615|ref|XP_003773712.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
           [Sarcophilus harrisii]
          Length = 484

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 118 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 177

Query: 70  NIPS 73
           NIPS
Sbjct: 178 NIPS 181


>gi|327259835|ref|XP_003214741.1| PREDICTED: paired box protein Pax-6-like isoform 7 [Anolis
           carolinensis]
          Length = 430

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|193786700|dbj|BAG52023.1| unnamed protein product [Homo sapiens]
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|151564048|gb|ABS17534.1| PAX6 [Pseudepidalea raddei]
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|149022827|gb|EDL79721.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
 gi|149022830|gb|EDL79724.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
          Length = 456

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 90  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 149

Query: 70  NIPS 73
           NIPS
Sbjct: 150 NIPS 153


>gi|99028934|ref|NP_001035735.1| paired box protein Pax-6 [Bos taurus]
 gi|344281156|ref|XP_003412346.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Loxodonta
           africana]
 gi|426245234|ref|XP_004016418.1| PREDICTED: paired box protein Pax-6 isoform 1 [Ovis aries]
 gi|426245236|ref|XP_004016419.1| PREDICTED: paired box protein Pax-6 isoform 2 [Ovis aries]
 gi|426245238|ref|XP_004016420.1| PREDICTED: paired box protein Pax-6 isoform 3 [Ovis aries]
 gi|426245240|ref|XP_004016421.1| PREDICTED: paired box protein Pax-6 isoform 4 [Ovis aries]
 gi|119390857|sp|Q1LZF1.1|PAX6_BOVIN RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
 gi|94534889|gb|AAI16039.1| Paired box 6 [Bos taurus]
 gi|296479736|tpg|DAA21851.1| TPA: paired box protein Pax-6 [Bos taurus]
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|4505615|ref|NP_000271.1| paired box protein Pax-6 isoform a [Homo sapiens]
 gi|189083681|ref|NP_001121084.1| paired box protein Pax-6 isoform a [Homo sapiens]
 gi|346644712|ref|NP_001231130.1| paired box protein Pax-6 isoform 2 [Mus musculus]
 gi|346644716|ref|NP_001231131.1| paired box protein Pax-6 isoform 2 [Mus musculus]
 gi|346644858|ref|NP_001231101.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
 gi|346644860|ref|NP_001231102.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
 gi|386642915|ref|NP_001245393.1| paired box protein Pax-6 isoform a [Homo sapiens]
 gi|386642917|ref|NP_001245394.1| paired box protein Pax-6 isoform a [Homo sapiens]
 gi|388452718|ref|NP_001253186.1| paired box protein Pax-6 [Macaca mulatta]
 gi|354470763|ref|XP_003497614.1| PREDICTED: paired box protein Pax-6 isoform 1 [Cricetulus griseus]
 gi|390470358|ref|XP_003734275.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
 gi|390470360|ref|XP_002755189.2| PREDICTED: paired box protein Pax-6 isoform 2 [Callithrix jacchus]
 gi|390470362|ref|XP_003734276.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
 gi|395815485|ref|XP_003781257.1| PREDICTED: paired box protein Pax-6 [Otolemur garnettii]
 gi|397520709|ref|XP_003830454.1| PREDICTED: paired box protein Pax-6 isoform 1 [Pan paniscus]
 gi|397520711|ref|XP_003830455.1| PREDICTED: paired box protein Pax-6 isoform 2 [Pan paniscus]
 gi|397520713|ref|XP_003830456.1| PREDICTED: paired box protein Pax-6 isoform 3 [Pan paniscus]
 gi|403254502|ref|XP_003920004.1| PREDICTED: paired box protein Pax-6 isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|403254504|ref|XP_003920005.1| PREDICTED: paired box protein Pax-6 isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|403254506|ref|XP_003920006.1| PREDICTED: paired box protein Pax-6 isoform 3 [Saimiri boliviensis
           boliviensis]
 gi|410973482|ref|XP_003993178.1| PREDICTED: paired box protein Pax-6 isoform 1 [Felis catus]
 gi|410973484|ref|XP_003993179.1| PREDICTED: paired box protein Pax-6 isoform 2 [Felis catus]
 gi|410973486|ref|XP_003993180.1| PREDICTED: paired box protein Pax-6 isoform 3 [Felis catus]
 gi|426367838|ref|XP_004050928.1| PREDICTED: paired box protein Pax-6 isoform 1 [Gorilla gorilla
           gorilla]
 gi|426367840|ref|XP_004050929.1| PREDICTED: paired box protein Pax-6 isoform 2 [Gorilla gorilla
           gorilla]
 gi|426367842|ref|XP_004050930.1| PREDICTED: paired box protein Pax-6 isoform 3 [Gorilla gorilla
           gorilla]
 gi|426367848|ref|XP_004050933.1| PREDICTED: paired box protein Pax-6 isoform 6 [Gorilla gorilla
           gorilla]
 gi|6174889|sp|P26367.2|PAX6_HUMAN RecName: Full=Paired box protein Pax-6; AltName: Full=Aniridia type
           II protein; AltName: Full=Oculorhombin
 gi|51702790|sp|P63015.1|PAX6_MOUSE RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
 gi|189633|gb|AAA36416.1| paired-box protein [Homo sapiens]
 gi|1405745|emb|CAA45380.1| Pax-6 (paired box containing gene) [Mus musculus]
 gi|15080397|gb|AAH11953.1| Paired box 6 [Homo sapiens]
 gi|15422113|gb|AAK95849.1| paired box protein PAX6 [Homo sapiens]
 gi|22477504|gb|AAH36957.1| Pax6 protein [Mus musculus]
 gi|51872083|gb|AAU12168.1| paired box gene 6 isoform a [Homo sapiens]
 gi|90076866|dbj|BAE88113.1| unnamed protein product [Macaca fascicularis]
 gi|123981066|gb|ABM82362.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
 gi|123995873|gb|ABM85538.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
 gi|148695798|gb|EDL27745.1| paired box gene 6, isoform CRA_a [Mus musculus]
 gi|261860050|dbj|BAI46547.1| paired box 6 [synthetic construct]
 gi|380813234|gb|AFE78491.1| paired box protein Pax-6 isoform a [Macaca mulatta]
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|6981334|ref|NP_037133.1| paired box protein Pax-6 [Rattus norvegicus]
 gi|51704214|sp|P63016.1|PAX6_RAT RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
 gi|1568653|gb|AAB09042.1| paired-box/homeobox protein [Rattus norvegicus]
 gi|118764376|gb|AAI28742.1| Paired box 6 [Rattus norvegicus]
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|26389393|dbj|BAC25729.1| unnamed protein product [Mus musculus]
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|348557448|ref|XP_003464531.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Cavia
           porcellus]
          Length = 422

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|61189938|gb|AAX39333.1| paired box gene 6 [Ovis aries]
          Length = 346

 Score =  120 bits (302), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 2  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 61

Query: 70 NIPS 73
          NIPS
Sbjct: 62 NIPS 65


>gi|115501601|gb|ABI98848.1| paired box 6 transcript variant 3 [Columba livia]
          Length = 422

 Score =  120 bits (302), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|410929045|ref|XP_003977910.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Takifugu
           rubripes]
          Length = 388

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|383862169|ref|XP_003706556.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
          Length = 552

 Score =  120 bits (301), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/64 (89%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVV+KIS YK ECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 65  ILGRYYETGSIRPRAIGGSKPRVATAEVVNKISLYKSECPSIFAWEIRDRLLQEGVCTND 124

Query: 70  NIPS 73
           NIPS
Sbjct: 125 NIPS 128


>gi|431915679|gb|ELK16012.1| Paired box protein Pax-6 [Pteropus alecto]
          Length = 441

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 153 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 212

Query: 70  NIPS 73
           NIPS
Sbjct: 213 NIPS 216


>gi|77547035|gb|ABA90484.1| paired box protein PAX6 isoform a [Oryctolagus cuniculus]
          Length = 422

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|1352720|sp|P47238.1|PAX6_COTJA RecName: Full=Paired box protein Pax-6; AltName: Full=Pax-QNR
 gi|481053|pir||S37689 paired box transcription factor Pax-6 - quail
 gi|311772|emb|CAA49899.1| paired box and homeobox [Coturnix coturnix]
 gi|115501603|gb|ABI98849.1| paired box 6 transcript variant 4 [Columba livia]
          Length = 416

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|348523547|ref|XP_003449285.1| PREDICTED: paired box protein Pax-6-like [Oreochromis niloticus]
          Length = 715

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/67 (82%), Positives = 60/67 (89%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EGVC
Sbjct: 350 VSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLAEGVC 409

Query: 67  SNDNIPS 73
           +NDNIPS
Sbjct: 410 TNDNIPS 416


>gi|18859211|ref|NP_571716.1| paired box gene 6b [Danio rerio]
 gi|3779238|gb|AAC96095.1| Pax-family transcription factor 6.2 [Danio rerio]
          Length = 437

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/64 (85%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|18859209|ref|NP_571379.1| paired box protein Pax-6 [Danio rerio]
 gi|62547|emb|CAA44867.1| pax-6 [Danio rerio]
          Length = 451

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/64 (85%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 89  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTND 148

Query: 70  NIPS 73
           NIPS
Sbjct: 149 NIPS 152


>gi|4519625|dbj|BAA75672.1| DjPax-6 [Dugesia japonica]
          Length = 550

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/61 (86%), Positives = 58/61 (95%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSIRP+AIGGSKPRVAT+ VVSKI+ YKRECPSIF+WEIRDRLLQEGVC+ DNIP
Sbjct: 73  RYYETGSIRPKAIGGSKPRVATSSVVSKIAAYKRECPSIFSWEIRDRLLQEGVCNQDNIP 132

Query: 73  S 73
           S
Sbjct: 133 S 133


>gi|348509488|ref|XP_003442280.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Oreochromis
           niloticus]
          Length = 457

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 95  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 154

Query: 70  NIPS 73
           NIPS
Sbjct: 155 NIPS 158


>gi|119588642|gb|EAW68236.1| paired box gene 6 (aniridia, keratitis), isoform CRA_c [Homo
           sapiens]
          Length = 470

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 104 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 163

Query: 70  NIPS 73
           NIPS
Sbjct: 164 NIPS 167


>gi|207113487|gb|ACI23462.1| Pax6 variant [Pseudepidalea raddei]
          Length = 393

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI  YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIVQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|55742272|ref|NP_001006763.1| paired box 6 [Xenopus (Silurana) tropicalis]
 gi|49522632|gb|AAH75551.1| paired box 6 [Xenopus (Silurana) tropicalis]
          Length = 424

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|62087934|dbj|BAD92414.1| paired box gene 6 isoform a variant [Homo sapiens]
          Length = 385

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 19 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 78

Query: 70 NIPS 73
          NIPS
Sbjct: 79 NIPS 82


>gi|327259823|ref|XP_003214735.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Anolis
           carolinensis]
          Length = 422

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|386783703|gb|AFJ24746.1| Pax6A [Schmidtea mediterranea]
          Length = 564

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/61 (86%), Positives = 58/61 (95%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSIRP+AIGGSKPRVAT+ VVSKI+ YKRECPSIF+WEIRDRLLQEGVC+ DNIP
Sbjct: 87  RYYETGSIRPKAIGGSKPRVATSSVVSKIAAYKRECPSIFSWEIRDRLLQEGVCNQDNIP 146

Query: 73  S 73
           S
Sbjct: 147 S 147


>gi|432852509|ref|XP_004067283.1| PREDICTED: paired box protein Pax-6 isoform 3 [Oryzias latipes]
          Length = 457

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 95  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 154

Query: 70  NIPS 73
           NIPS
Sbjct: 155 NIPS 158


>gi|348509486|ref|XP_003442279.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Oreochromis
           niloticus]
          Length = 449

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 87  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 146

Query: 70  NIPS 73
           NIPS
Sbjct: 147 NIPS 150


>gi|357616883|gb|EHJ70462.1| hypothetical protein KGM_02181 [Danaus plexippus]
          Length = 133

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 61/64 (95%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVATAEVVSKI+ YKRECPSIFAWEIRDRLL EGVC++D
Sbjct: 65  ILGRYYETGSIRPRAIGGSKPRVATAEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTSD 124

Query: 70  NIPS 73
           NIPS
Sbjct: 125 NIPS 128


>gi|321464774|gb|EFX75780.1| eyeless [Daphnia pulex]
          Length = 619

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT +VV KIS +KRECPSIFAWEIRDRLLQE +C+ND
Sbjct: 68  ILGRYYETGSIRPRAIGGSKPRVATNDVVGKISQFKRECPSIFAWEIRDRLLQEAICNND 127

Query: 70  NIPS 73
           NIPS
Sbjct: 128 NIPS 131


>gi|351714944|gb|EHB17863.1| Paired box protein Pax-6 [Heterocephalus glaber]
          Length = 1055

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 540 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 599

Query: 70  NIPS 73
           NIPS
Sbjct: 600 NIPS 603


>gi|444732073|gb|ELW72394.1| Paired box protein Pax-6 [Tupaia chinensis]
          Length = 601

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|410929049|ref|XP_003977912.1| PREDICTED: paired box protein Pax-6-like isoform 4 [Takifugu
           rubripes]
          Length = 456

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 95  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 154

Query: 70  NIPS 73
           NIPS
Sbjct: 155 NIPS 158


>gi|3402201|emb|CAA16493.1| PAX6 [Takifugu rubripes]
          Length = 409

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 76  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 135

Query: 70  NIPS 73
           NIPS
Sbjct: 136 NIPS 139


>gi|432852507|ref|XP_004067282.1| PREDICTED: paired box protein Pax-6 isoform 2 [Oryzias latipes]
          Length = 449

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 87  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 146

Query: 70  NIPS 73
           NIPS
Sbjct: 147 NIPS 150


>gi|410929047|ref|XP_003977911.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Takifugu
           rubripes]
          Length = 448

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 87  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 146

Query: 70  NIPS 73
           NIPS
Sbjct: 147 NIPS 150


>gi|348509484|ref|XP_003442278.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Oreochromis
           niloticus]
          Length = 437

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|129651|sp|P26630.1|PAX6_DANRE RecName: Full=Paired box protein Pax-6; AltName: Full=Pax[Zf-a]
 gi|62549|emb|CAA43661.1| Pax[zf-a] [Danio rerio]
 gi|44890538|gb|AAH66722.1| Pax6a protein [Danio rerio]
          Length = 437

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/64 (85%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|334331633|ref|XP_001368528.2| PREDICTED: paired box protein Pax-6 isoform 1 [Monodelphis
           domestica]
          Length = 553

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/63 (87%), Positives = 59/63 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 129

Query: 70  NIP 72
           NIP
Sbjct: 130 NIP 132


>gi|74096055|ref|NP_001027641.1| homeobox transcription factor Pax6 [Ciona intestinalis]
 gi|18700477|dbj|BAB85207.1| Pax6 [Ciona intestinalis]
          Length = 497

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETG+IRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 78  ILARYYETGTIRPRAIGGSKPRVATPEVVNKIASYKRECPSIFAWEIRDRLLNEGICNND 137

Query: 70  NIPS 73
           NIPS
Sbjct: 138 NIPS 141


>gi|70570887|dbj|BAE06639.1| transcription factor protein [Ciona intestinalis]
          Length = 496

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETG+IRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 78  ILARYYETGTIRPRAIGGSKPRVATPEVVNKIASYKRECPSIFAWEIRDRLLNEGICNND 137

Query: 70  NIPS 73
           NIPS
Sbjct: 138 NIPS 141


>gi|432852505|ref|XP_004067281.1| PREDICTED: paired box protein Pax-6 isoform 1 [Oryzias latipes]
 gi|3914281|sp|O73917.1|PAX6_ORYLA RecName: Full=Paired box protein Pax-6
 gi|3115324|emb|CAA04395.1| Pax6 [Oryzias latipes]
          Length = 437

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|410929043|ref|XP_003977909.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Takifugu
           rubripes]
          Length = 436

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|228153|prf||1717390A pax gene
          Length = 374

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/64 (85%), Positives = 59/64 (92%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 12 ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTND 71

Query: 70 NIPS 73
          NIPS
Sbjct: 72 NIPS 75


>gi|61967942|gb|AAX56950.1| PAX6 [Homo sapiens]
          Length = 115

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 52  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 111

Query: 70  NIPS 73
           NIPS
Sbjct: 112 NIPS 115


>gi|1527205|gb|AAB07733.1| XLPAX6 [Xenopus laevis]
          Length = 407

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL +GVC+ND
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|357630890|gb|EHJ78711.1| twin of eyeless [Danaus plexippus]
          Length = 409

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/63 (84%), Positives = 57/63 (90%)

Query: 11  VHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDN 70
           +HRYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC+NDN
Sbjct: 59  IHRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSENVCNNDN 118

Query: 71  IPS 73
           IPS
Sbjct: 119 IPS 121


>gi|47218729|emb|CAG05701.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 417

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|256087587|ref|XP_002579948.1| paired box protein pax-6 [Schistosoma mansoni]
          Length = 712

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/88 (67%), Positives = 71/88 (80%), Gaps = 9/88 (10%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSIRP+AIGGSKPRVAT  VV KI+HYKRECPSIFAWEIRDRLLQEG+C+ +NIP
Sbjct: 63  RYYETGSIRPKAIGGSKPRVATNLVVLKIAHYKRECPSIFAWEIRDRLLQEGICTTENIP 122

Query: 73  SRECPSIFAWEIRDRLLQEGVCSNDNIP 100
           S    SI      +R+L+  VC+++ +P
Sbjct: 123 S--VSSI------NRVLRN-VCNDNQLP 141


>gi|8132377|gb|AAF73268.1|AF154552_1 paired domain transcription factor variant B [Xenopus laevis]
          Length = 393

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL +GVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|8132387|gb|AAF73273.1|AF154557_1 paired domain transcription factor variant B [Xenopus laevis]
          Length = 393

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL +GVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|326680199|ref|XP_003201477.1| PREDICTED: paired box protein Pax-6-like [Danio rerio]
          Length = 275

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/64 (85%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 89  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTND 148

Query: 70  NIPS 73
           NIPS
Sbjct: 149 NIPS 152


>gi|47206453|emb|CAF89478.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 433

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YK+ECPSIFAWEIRDRLL EGVC+ND
Sbjct: 53  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKKECPSIFAWEIRDRLLAEGVCTND 112

Query: 70  NIPS 73
           NIPS
Sbjct: 113 NIPS 116


>gi|2369654|emb|CAA68837.1| PAX-6 protein [Astyanax mexicanus]
          Length = 433

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 71  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQFKRECPSIFAWEIRDRLLSEGICTND 130

Query: 70  NIPS 73
           NIPS
Sbjct: 131 NIPS 134


>gi|2369653|emb|CAA68836.1| PAX-6 protein [Astyanax mexicanus]
          Length = 441

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 79  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQFKRECPSIFAWEIRDRLLSEGICTND 138

Query: 70  NIPS 73
           NIPS
Sbjct: 139 NIPS 142


>gi|2369655|emb|CAA68838.1| PAX-6 protein [Astyanax mexicanus]
          Length = 459

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 97  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQFKRECPSIFAWEIRDRLLSEGICTND 156

Query: 70  NIPS 73
           NIPS
Sbjct: 157 NIPS 160


>gi|148222787|ref|NP_001079413.1| paired box 6 [Xenopus laevis]
 gi|27469846|gb|AAH41712.1| MGC52531 protein [Xenopus laevis]
          Length = 453

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL +GVC+ND
Sbjct: 87  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTND 146

Query: 70  NIPS 73
           NIPS
Sbjct: 147 NIPS 150


>gi|57283151|emb|CAE30301.1| Pax6.1 protein [Glomeris marginata]
          Length = 235

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 59/64 (92%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL +GVC+ND
Sbjct: 23 ILGRYYETGSIRPRAIGGSKPRVATQEVVGKIAQYKRECPSIFAWEIRDRLLSDGVCTND 82

Query: 70 NIPS 73
          NIPS
Sbjct: 83 NIPS 86


>gi|325516451|gb|ADZ24784.1| Pax6 [Terebratalia transversa]
          Length = 433

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/64 (85%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+HYKRECPSIFAWEIRDRLLQE VCS +
Sbjct: 62  ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAHYKRECPSIFAWEIRDRLLQETVCSQE 121

Query: 70  NIPS 73
           NIPS
Sbjct: 122 NIPS 125


>gi|260792042|ref|XP_002591036.1| paired box protein 6 [Branchiostoma floridae]
 gi|229276236|gb|EEN47047.1| paired box protein 6 [Branchiostoma floridae]
          Length = 981

 Score =  118 bits (295), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/70 (77%), Positives = 63/70 (90%)

Query: 5   TLLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEG 64
           T+  P+  RYYETGSIRPRAIGGSKPRVAT EVV+KI+ +KRECPSIFAWEIRDRLL EG
Sbjct: 306 TVRPPVPSRYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEG 365

Query: 65  VCSNDNIPSR 74
           +C+N+NIPS+
Sbjct: 366 ICTNENIPSK 375


>gi|3204114|emb|CAA11366.1| Pax6 [Branchiostoma floridae]
          Length = 439

 Score =  118 bits (295), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ +KRECPSIFAWEIRDRLL EG+C+N+
Sbjct: 55  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNE 114

Query: 70  NIPS 73
           NIPS
Sbjct: 115 NIPS 118


>gi|117650666|gb|ABK54278.1| Pax6 [Branchiostoma belcheri]
          Length = 461

 Score =  118 bits (295), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ +KRECPSIFAWEIRDRLL EG+C+N+
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNE 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|345496344|ref|XP_001602823.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
          Length = 522

 Score =  118 bits (295), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 84  ILGRYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNND 143

Query: 70  NIPS 73
           NIPS
Sbjct: 144 NIPS 147


>gi|3204116|emb|CAA11367.1| Pax6 [Branchiostoma floridae]
          Length = 462

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ +KRECPSIFAWEIRDRLL EG+C+N+
Sbjct: 78  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNE 137

Query: 70  NIPS 73
           NIPS
Sbjct: 138 NIPS 141


>gi|2369651|emb|CAA68835.1| PAX-6 protein [Astyanax mexicanus]
 gi|2369657|emb|CAA68839.1| PAX-6 protein [Astyanax mexicanus]
 gi|50082925|gb|AAT70088.1| Pax6 homeobox protein [Astyanax mexicanus]
          Length = 437

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 75  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQFKRECPSIFAWEIRDRLLSEGICTND 134

Query: 70  NIPS 73
           NIPS
Sbjct: 135 NIPS 138


>gi|332022174|gb|EGI62491.1| Paired box protein Pax-6 [Acromyrmex echinatior]
          Length = 631

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 201 ILGRYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNND 260

Query: 70  NIPS 73
           NIPS
Sbjct: 261 NIPS 264


>gi|32250393|gb|AAP74576.1| PAX6 protein [Homo sapiens]
          Length = 74

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 55/63 (87%), Positives = 59/63 (93%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 9  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 68

Query: 70 NIP 72
          NIP
Sbjct: 69 NIP 71


>gi|340715062|ref|XP_003396039.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
 gi|350414727|ref|XP_003490400.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
          Length = 514

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 86  ILGRYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNND 145

Query: 70  NIPS 73
           NIPS
Sbjct: 146 NIPS 149


>gi|307189169|gb|EFN73617.1| Paired box protein Pax-6 [Camponotus floridanus]
          Length = 516

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 86  ILGRYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNND 145

Query: 70  NIPS 73
           NIPS
Sbjct: 146 NIPS 149


>gi|391333106|ref|XP_003740963.1| PREDICTED: paired box protein Pax-6-like [Metaseiulus occidentalis]
          Length = 551

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 53/64 (82%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT +VV+KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 84  ILGRYYETGSIRPRAIGGSKPRVATPDVVNKIAEYKRECPSIFAWEIRDRLLSEGVCNND 143

Query: 70  NIPS 73
           N+PS
Sbjct: 144 NVPS 147


>gi|8132383|gb|AAF73271.1|AF154555_1 paired domain transcription factor variant A [Xenopus laevis]
 gi|8132385|gb|AAF73272.1|AF154556_1 paired domain transcription factor variant A [Xenopus laevis]
          Length = 422

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL +GVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|325973713|emb|CBX88047.1| Pax6 transcription factor [Eptatretus burgeri]
          Length = 403

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ +KRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLAEGVCAND 115

Query: 70  NIPS 73
           NIPS
Sbjct: 116 NIPS 119


>gi|383859947|ref|XP_003705453.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
          Length = 628

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 200 ILGRYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNND 259

Query: 70  NIPS 73
           NIPS
Sbjct: 260 NIPS 263


>gi|388441|gb|AAB27470.1| paired box Pax-6 gene product [chickens, White Leghorn, embryo,
           Peptide Partial, 128 aa, segment 1 of 2]
          Length = 128

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 55/64 (85%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+  KRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 53  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQTKRECPSIFAWEIRDRLLSEGVCTND 112

Query: 70  NIPS 73
           NIPS
Sbjct: 113 NIPS 116


>gi|3204118|emb|CAA11368.1| Pax6 [Branchiostoma floridae]
          Length = 463

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ +KRECPSIFAWEIRDRLL EG+C+N+
Sbjct: 55  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNE 114

Query: 70  NIPS 73
           NIPS
Sbjct: 115 NIPS 118


>gi|3204110|emb|CAA11364.1| Pax6 [Branchiostoma floridae]
          Length = 483

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ +KRECPSIFAWEIRDRLL EG+C+N+
Sbjct: 78  ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNE 137

Query: 70  NIPS 73
           NIPS
Sbjct: 138 NIPS 141


>gi|307211180|gb|EFN87393.1| Paired box protein Pax-6 [Harpegnathos saltator]
          Length = 506

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 112 ILGRYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNND 171

Query: 70  NIPS 73
           NIPS
Sbjct: 172 NIPS 175


>gi|328716918|ref|XP_003246075.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 571

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLL EGVCSND
Sbjct: 85  ILGRYYETGSIKPRAIGGSKPRVATNGVVNKIADYKRECPSIFAWEIRDRLLSEGVCSND 144

Query: 70  NIPS 73
           NIPS
Sbjct: 145 NIPS 148


>gi|353232111|emb|CCD79466.1| putative paired box protein pax-6 [Schistosoma mansoni]
          Length = 1258

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/61 (86%), Positives = 56/61 (91%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSIRP+AIGGSKPRVAT  VV+KI  YKRECPSIFAWEIRDRLLQEGVC+ DNIP
Sbjct: 77  RYYETGSIRPKAIGGSKPRVATNAVVTKIDIYKRECPSIFAWEIRDRLLQEGVCTPDNIP 136

Query: 73  S 73
           S
Sbjct: 137 S 137


>gi|380013620|ref|XP_003690850.1| PREDICTED: paired box protein Pax-6-like, partial [Apis florea]
          Length = 166

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 60/64 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLLQEGVC+ND
Sbjct: 103 ILGRYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNND 162

Query: 70  NIPS 73
           NIPS
Sbjct: 163 NIPS 166


>gi|328716920|ref|XP_001944246.2| PREDICTED: paired box protein Pax-6-like isoform 1 [Acyrthosiphon
           pisum]
          Length = 622

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLL EGVCSND
Sbjct: 136 ILGRYYETGSIKPRAIGGSKPRVATNGVVNKIADYKRECPSIFAWEIRDRLLSEGVCSND 195

Query: 70  NIPS 73
           NIPS
Sbjct: 196 NIPS 199


>gi|1296836|emb|CAA64847.1| Pax6-like protein [Lineus sanguineus]
          Length = 370

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+HYKRECPSIFAWEIRDRLL + VC
Sbjct: 96  VTKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAHYKRECPSIFAWEIRDRLLSDAVC 155

Query: 67  SNDNIPS 73
           + DNIPS
Sbjct: 156 NQDNIPS 162


>gi|15741042|gb|AAK26167.1| Pax6A [Girardia tigrina]
          Length = 464

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/68 (77%), Positives = 59/68 (86%), Gaps = 4/68 (5%)

Query: 6  LLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGV 65
          +LC    RYYETGSIRP+AIGGSKP VAT+ VVSK + YKRECPSIF+WEIRDRLLQEGV
Sbjct: 6  ILC----RYYETGSIRPKAIGGSKPTVATSSVVSKTAAYKRECPSIFSWEIRDRLLQEGV 61

Query: 66 CSNDNIPS 73
          C+ DNIPS
Sbjct: 62 CNQDNIPS 69


>gi|5822580|pdb|6PAX|A Chain A, Crystal Structure Of The Human Pax-6 Paired Domain-Dna
           Complex Reveals A General Model For Pax Protein-Dna
           Interactions
          Length = 133

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYY TGSIRPRAIGGSKPRVAT EVVSKI+ YK+ECPSIFAWEIRDRLL EGVC+ND
Sbjct: 53  ILGRYYATGSIRPRAIGGSKPRVATPEVVSKIAQYKQECPSIFAWEIRDRLLSEGVCTND 112

Query: 70  NIPS 73
           NIPS
Sbjct: 113 NIPS 116


>gi|78370180|gb|ABB43131.1| Pax-6 [Daphnia pulex]
          Length = 469

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 60/67 (89%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRPRAIGGSKPRVAT +VV KIS +KRECPSIFAWEIRDRLLQE +C
Sbjct: 53  VSKILGRYYETGSIRPRAIGGSKPRVATNDVVGKISQFKRECPSIFAWEIRDRLLQEAIC 112

Query: 67  SNDNIPS 73
           +NDNIPS
Sbjct: 113 NNDNIPS 119


>gi|1778017|gb|AAB40616.1| Pax-6 [Doryteuthis opalescens]
          Length = 460

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL EGVC+ D
Sbjct: 64  ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSEGVCTQD 123

Query: 70  NIPS 73
           NIPS
Sbjct: 124 NIPS 127


>gi|440647289|dbj|BAM74251.1| Pax-6 variant form1 [Idiosepius paradoxus]
          Length = 408

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWE+RDRLL EGVC+ D
Sbjct: 63  ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEVRDRLLSEGVCTQD 122

Query: 70  NIPS 73
           NIPS
Sbjct: 123 NIPS 126


>gi|21667881|gb|AAM74161.1|AF513712_1 Pax-6 protein [Euprymna scolopes]
          Length = 503

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/64 (82%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL EGVC+ D
Sbjct: 107 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSEGVCTQD 166

Query: 70  NIPS 73
           NIPS
Sbjct: 167 NIPS 170


>gi|405966276|gb|EKC31583.1| Paired box protein Pax-6 [Crassostrea gigas]
          Length = 481

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EG C+ D
Sbjct: 85  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGCCNQD 144

Query: 70  NIPS 73
           NIPS
Sbjct: 145 NIPS 148


>gi|15080680|dbj|BAB62531.1| paired box transcription factor Pax6 [Lethenteron camtschaticum]
          Length = 448

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/64 (82%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EG C++D
Sbjct: 85  ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGACTSD 144

Query: 70  NIPS 73
           NIPS
Sbjct: 145 NIPS 148


>gi|241999742|ref|XP_002434514.1| paired box protein Pax-6, putative [Ixodes scapularis]
 gi|215497844|gb|EEC07338.1| paired box protein Pax-6, putative [Ixodes scapularis]
          Length = 427

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/71 (80%), Positives = 61/71 (85%), Gaps = 3/71 (4%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 61  ILGRYYETGSIRPRAIGGSKPRVATPPVVGKIAEYKRECPSIFAWEIRDRLLSEGVCNND 120

Query: 70  NIP---SRECP 77
           NIP   S ECP
Sbjct: 121 NIPSVTSVECP 131


>gi|3204112|emb|CAA11365.1| Pax6 [Branchiostoma floridae]
          Length = 431

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/60 (85%), Positives = 57/60 (95%)

Query: 14  YYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIPS 73
           YYETGSIRPRAIGGSKPRVAT EVV+KI+ +KRECPSIFAWEIRDRLL EG+C+N+NIPS
Sbjct: 51  YYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNENIPS 110


>gi|358340084|dbj|GAA48050.1| paired box protein Pax-6 [Clonorchis sinensis]
          Length = 981

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/61 (86%), Positives = 57/61 (93%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSIRP+AIGGSKPRVAT  VV KI+HYKRECPSIFAWEIRDRLLQEGVC+ +NIP
Sbjct: 62  RYYETGSIRPKAIGGSKPRVATNMVVLKIAHYKRECPSIFAWEIRDRLLQEGVCTPENIP 121

Query: 73  S 73
           S
Sbjct: 122 S 122


>gi|170040740|ref|XP_001848147.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167864330|gb|EDS27713.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 318

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 60/67 (89%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSI+PRAIGGSKPRVAT+ VV+KIS YK ECPSIFAWEIRDRLL EGVC
Sbjct: 69  VSKILGRYYETGSIKPRAIGGSKPRVATSSVVNKISEYKAECPSIFAWEIRDRLLSEGVC 128

Query: 67  SNDNIPS 73
           +NDNIPS
Sbjct: 129 NNDNIPS 135


>gi|121495689|emb|CAM12260.1| PAX-6 protein [Sepia officinalis]
          Length = 106

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/64 (82%), Positives = 58/64 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL EGVC+ D
Sbjct: 1  ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSEGVCTQD 60

Query: 70 NIPS 73
          NIPS
Sbjct: 61 NIPS 64


>gi|313240077|emb|CBY32432.1| unnamed protein product [Oikopleura dioica]
          Length = 433

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRL+ E VC+ D
Sbjct: 102 ILARYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVCNTD 161

Query: 70  NIPS 73
           NIPS
Sbjct: 162 NIPS 165


>gi|347963096|ref|XP_311087.5| AGAP000067-PA [Anopheles gambiae str. PEST]
 gi|333467362|gb|EAA06761.5| AGAP000067-PA [Anopheles gambiae str. PEST]
          Length = 313

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 53/64 (82%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVATA VVSKI+ YK ECPSIFAWEIRDRLL EG C+ND
Sbjct: 72  ILGRYYETGSIKPRAIGGSKPRVATAAVVSKIAEYKAECPSIFAWEIRDRLLSEGTCNND 131

Query: 70  NIPS 73
           NIPS
Sbjct: 132 NIPS 135


>gi|156915254|emb|CAO99176.1| Pax-6 transcription factor [Brachionus plicatilis]
          Length = 336

 Score =  115 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT++VV+KI+ YKRECPSIFAWEIRDRLL E VC+ D
Sbjct: 100 ILSRYYETGSIKPRAIGGSKPRVATSDVVAKIAGYKRECPSIFAWEIRDRLLNENVCNQD 159

Query: 70  NIPS 73
           NIPS
Sbjct: 160 NIPS 163


>gi|83318915|emb|CAJ40659.1| Pax6 protein [Platynereis dumerilii]
          Length = 449

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+K++ YKRECPSIFAWEIRDRLL EGVC+ D
Sbjct: 93  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKVAQYKRECPSIFAWEIRDRLLSEGVCNQD 152

Query: 70  NIPS 73
           +IPS
Sbjct: 153 DIPS 156


>gi|57283153|emb|CAE30302.1| Pax6.2 protein [Glomeris marginata]
          Length = 228

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 52/67 (77%), Positives = 60/67 (89%)

Query: 7  LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
          +  ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLL +GVC
Sbjct: 20 VSKILGRYYETGSIKPRAIGGSKPRVATPSVVNKIADYKRECPSIFAWEIRDRLLSDGVC 79

Query: 67 SNDNIPS 73
          +NDNIPS
Sbjct: 80 TNDNIPS 86


>gi|270006382|gb|EFA02830.1| twin of eyeless [Tribolium castaneum]
          Length = 524

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV+KI+ +KRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 143 ILGRYYETGSIKPRAIGGSKPRVATQPVVNKIAEFKRECPSIFAWEIRDRLLSEGVCNND 202

Query: 70  NIPS 73
           NIPS
Sbjct: 203 NIPS 206


>gi|313241707|emb|CBY33928.1| unnamed protein product [Oikopleura dioica]
          Length = 433

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRL+ E VC+ D
Sbjct: 102 ILARYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVCNTD 161

Query: 70  NIPS 73
           NIPS
Sbjct: 162 NIPS 165


>gi|383210367|dbj|BAM08280.1| twin of eyeless, partial [Gryllus bimaculatus]
          Length = 213

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 58/64 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSI+PR IGGSKPRVAT+ VVSKI+ YKRECPSIFAWEIRDRLL E VC+ND
Sbjct: 3  ILGRYYETGSIKPRVIGGSKPRVATSNVVSKIADYKRECPSIFAWEIRDRLLSEAVCTND 62

Query: 70 NIPS 73
          NIPS
Sbjct: 63 NIPS 66


>gi|222530732|emb|CAU83353.1| Pax6 protein [Parasteatoda tepidariorum]
          Length = 210

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 59/64 (92%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVA  +VV+KI+H+KRECPSIFAWEIRDRLL EG C+ND
Sbjct: 24 ILGRYYETGSIRPRAIGGSKPRVAAPDVVAKIAHFKRECPSIFAWEIRDRLLSEGACTND 83

Query: 70 NIPS 73
          ++PS
Sbjct: 84 SVPS 87


>gi|63028387|gb|AAY27075.1| Pax6 [Oikopleura dioica]
          Length = 412

 Score =  114 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRL+ E VC++D
Sbjct: 84  ILARYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVCNSD 143

Query: 70  NIPS 73
           NIPS
Sbjct: 144 NIPS 147


>gi|440647293|dbj|BAM74253.1| Pax-6 variant form3 [Idiosepius paradoxus]
          Length = 499

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEI DRLL EGVC+ D
Sbjct: 63  ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIGDRLLSEGVCTQD 122

Query: 70  NIPS 73
           NIPS
Sbjct: 123 NIPS 126


>gi|440647291|dbj|BAM74252.1| Pax-6 variant form2 [Idiosepius paradoxus]
          Length = 448

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKP VAT EVV KI+ +KRECPSIFAWE+RDRLL EGVC+ D
Sbjct: 63  ILGRYYETGSIRPRAIGGSKPXVATPEVVQKIAQFKRECPSIFAWEVRDRLLSEGVCTQD 122

Query: 70  NIPS 73
           NIPS
Sbjct: 123 NIPS 126


>gi|339241875|ref|XP_003376863.1| paired box protein Pax-6 [Trichinella spiralis]
 gi|316974400|gb|EFV57892.1| paired box protein Pax-6 [Trichinella spiralis]
          Length = 419

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/61 (86%), Positives = 56/61 (91%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSIRPRAIGGSKPRVAT +VV KI+ YKRECPSIFAWEIRDRLLQE VC+ DNIP
Sbjct: 100 RYYETGSIRPRAIGGSKPRVATNKVVDKIADYKRECPSIFAWEIRDRLLQENVCNQDNIP 159

Query: 73  S 73
           S
Sbjct: 160 S 160


>gi|56714093|gb|AAW24017.1| homeodomain protein Pax6 [Oikopleura dioica]
          Length = 414

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRL+ E VC+ D
Sbjct: 86  ILARYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVCNTD 145

Query: 70  NIPS 73
           NIPS
Sbjct: 146 NIPS 149


>gi|358337852|dbj|GAA56186.1| paired box protein Pax-6 [Clonorchis sinensis]
          Length = 580

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 56/61 (91%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSIRP+AIGGSKPRVAT  VV+KI  YKRECPSIFAWEIRDRLLQEG+C+ DNIP
Sbjct: 153 RYYETGSIRPKAIGGSKPRVATGSVVAKIDLYKRECPSIFAWEIRDRLLQEGICTPDNIP 212

Query: 73  S 73
           S
Sbjct: 213 S 213


>gi|195064095|ref|XP_001996496.1| GH23963 [Drosophila grimshawi]
 gi|193892042|gb|EDV90908.1| GH23963 [Drosophila grimshawi]
          Length = 545

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 85  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 144

Query: 70  NIPS 73
           NIPS
Sbjct: 145 NIPS 148


>gi|259013350|ref|NP_001158383.1| paired box 6 [Saccoglossus kowalevskii]
 gi|32307795|gb|AAP79294.1| pax6 [Saccoglossus kowalevskii]
          Length = 457

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT  VV KI+ +KRECPSIFAWEIRDRLLQE VC+ D
Sbjct: 63  ILGRYYETGSIRPRAIGGSKPRVATPPVVGKIAQFKRECPSIFAWEIRDRLLQEQVCTQD 122

Query: 70  NIPS 73
           NIPS
Sbjct: 123 NIPS 126


>gi|984800|gb|AAA75363.1| Pax-6 [Paracentrotus lividus]
          Length = 442

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/64 (78%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT  VV++I+HYKRECPSIFAWEIRDRLL E +C+ +
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPHVVTRIAHYKRECPSIFAWEIRDRLLAEKICNQE 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|195450696|ref|XP_002072593.1| GK13683 [Drosophila willistoni]
 gi|194168678|gb|EDW83579.1| GK13683 [Drosophila willistoni]
          Length = 552

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 82  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 141

Query: 70  NIPS 73
           NIPS
Sbjct: 142 NIPS 145


>gi|313233507|emb|CBY09679.1| unnamed protein product [Oikopleura dioica]
          Length = 410

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 59/67 (88%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSI+PRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRL+ E VC
Sbjct: 83  VSKILARYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVC 142

Query: 67  SNDNIPS 73
           + DNIPS
Sbjct: 143 NTDNIPS 149


>gi|195134022|ref|XP_002011437.1| GI14042 [Drosophila mojavensis]
 gi|193912060|gb|EDW10927.1| GI14042 [Drosophila mojavensis]
          Length = 569

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 86  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 145

Query: 70  NIPS 73
           NIPS
Sbjct: 146 NIPS 149


>gi|80971566|gb|ABB52751.1| Pax-6, partial [Strongylocentrotus droebachiensis]
          Length = 384

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/64 (78%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT  VV++I+HYKRECPSIFAWEIRDRLL E +C+ +
Sbjct: 42  ILGRYYETGSIRPRAIGGSKPRVATPHVVTRIAHYKRECPSIFAWEIRDRLLAEKICNQE 101

Query: 70  NIPS 73
           NIPS
Sbjct: 102 NIPS 105


>gi|195402191|ref|XP_002059690.1| GJ13300 [Drosophila virilis]
 gi|194155904|gb|EDW71088.1| GJ13300 [Drosophila virilis]
 gi|263359635|gb|ACY70471.1| hypothetical protein DVIR88_6g0008 [Drosophila virilis]
          Length = 549

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 85  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 144

Query: 70  NIPS 73
           NIPS
Sbjct: 145 NIPS 148


>gi|321400078|ref|NP_001189460.1| twin of eyeless [Bombyx mori]
 gi|304421458|gb|ADM32528.1| pak6 [Bombyx mori]
          Length = 183

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC+ND
Sbjct: 70  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSENVCNND 129

Query: 70  NIPS 73
           NIPS
Sbjct: 130 NIPS 133


>gi|321464778|gb|EFX75784.1| twin of eyeless [Daphnia pulex]
          Length = 473

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT+ VV+KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 72  ILGRYYETGSIKPRAIGGSKPRVATSCVVTKIADYKRECPSIFAWEIRDRLLSEGVCNND 131

Query: 70  NIPS 73
            IPS
Sbjct: 132 TIPS 135


>gi|195175466|ref|XP_002028472.1| GL17563 [Drosophila persimilis]
 gi|198462201|ref|XP_002135664.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
 gi|194103225|gb|EDW25268.1| GL17563 [Drosophila persimilis]
 gi|198139762|gb|EDY70832.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
          Length = 546

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 82  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 141

Query: 70  NIPS 73
           NIPS
Sbjct: 142 NIPS 145


>gi|440647295|dbj|BAM74254.1| Pax-6 variant form4 [Idiosepius paradoxus]
          Length = 482

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 56/63 (88%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEI DRLL EGVC+ D
Sbjct: 63  ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIGDRLLSEGVCTQD 122

Query: 70  NIP 72
           NIP
Sbjct: 123 NIP 125


>gi|442614511|ref|NP_001259080.1| twin of eyeless, isoform C [Drosophila melanogaster]
 gi|440218170|gb|AGB96570.1| twin of eyeless, isoform C [Drosophila melanogaster]
          Length = 526

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 81  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 140

Query: 70  NIPS 73
           NIPS
Sbjct: 141 NIPS 144


>gi|194770706|ref|XP_001967430.1| GF21877 [Drosophila ananassae]
 gi|190618406|gb|EDV33930.1| GF21877 [Drosophila ananassae]
          Length = 545

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KIS YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 81  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKISDYKRECPSIFAWEIRDRLLSEQVCNSD 140

Query: 70  NIPS 73
           NIPS
Sbjct: 141 NIPS 144


>gi|440647287|dbj|BAM74250.1| Pax-6 authentic variant [Idiosepius paradoxus]
          Length = 459

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 50/63 (79%), Positives = 56/63 (88%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWE+ DRLL EGVC+ D
Sbjct: 63  ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEVGDRLLSEGVCTQD 122

Query: 70  NIP 72
           NIP
Sbjct: 123 NIP 125


>gi|45549245|ref|NP_524638.3| twin of eyeless, isoform A [Drosophila melanogaster]
 gi|15291285|gb|AAK92911.1| GH14454p [Drosophila melanogaster]
 gi|45444822|gb|AAF59395.4| twin of eyeless, isoform A [Drosophila melanogaster]
 gi|220942324|gb|ACL83705.1| toy-PA [synthetic construct]
 gi|220952546|gb|ACL88816.1| toy-PA [synthetic construct]
          Length = 543

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 81  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 140

Query: 70  NIPS 73
           NIPS
Sbjct: 141 NIPS 144


>gi|256089539|ref|XP_002580857.1| paired box protein pax-6 [Schistosoma mansoni]
          Length = 122

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/61 (86%), Positives = 56/61 (91%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSIRP+AIGGSKPRVAT  VV+KI  YKRECPSIFAWEIRDRLLQEGVC+ DNIP
Sbjct: 55  RYYETGSIRPKAIGGSKPRVATNAVVTKIDIYKRECPSIFAWEIRDRLLQEGVCTPDNIP 114

Query: 73  S 73
           S
Sbjct: 115 S 115


>gi|293631905|gb|ADE59459.1| paired box protein 6 [Metacrinus rotundus]
          Length = 436

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 56/64 (87%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT  VV+KI+ YKRECPSIFAWEIRDRLL E VCS D
Sbjct: 62  ILGRYYETGSIRPRAIGGSKPRVATMSVVNKIAIYKRECPSIFAWEIRDRLLNENVCSQD 121

Query: 70  NIPS 73
            IPS
Sbjct: 122 TIPS 125


>gi|81022828|gb|ABB55263.1| PAX6 [Homo sapiens]
          Length = 72

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/61 (85%), Positives = 56/61 (91%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 9  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 68

Query: 70 N 70
           
Sbjct: 69 K 69


>gi|126702026|gb|ABN09915.2| paired box 6A transcription factor [Helobdella sp. MS-2000]
          Length = 933

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/64 (75%), Positives = 56/64 (87%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYE+GSIRPR IGGSKPRVAT  VV +I+HYK+ECPSIFAWEIRDRLL E +CS +
Sbjct: 58  ILGRYYESGSIRPRTIGGSKPRVATMSVVQRIAHYKKECPSIFAWEIRDRLLSEEICSQE 117

Query: 70  NIPS 73
           NIPS
Sbjct: 118 NIPS 121


>gi|4883932|gb|AAD31712.1|AF134350_1 transcription factor Toy [Drosophila melanogaster]
          Length = 543

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 81  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 140

Query: 70  NIPS 73
           NIPS
Sbjct: 141 NIPS 144


>gi|194913445|ref|XP_001982698.1| GG16402 [Drosophila erecta]
 gi|190647914|gb|EDV45217.1| GG16402 [Drosophila erecta]
          Length = 543

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 81  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 140

Query: 70  NIPS 73
           NIPS
Sbjct: 141 NIPS 144


>gi|195355670|ref|XP_002044313.1| GM13021 [Drosophila sechellia]
 gi|194130600|gb|EDW52643.1| GM13021 [Drosophila sechellia]
          Length = 543

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 81  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 140

Query: 70  NIPS 73
           NIPS
Sbjct: 141 NIPS 144


>gi|321446368|gb|EFX60850.1| hypothetical protein DAPPUDRAFT_122807 [Daphnia pulex]
          Length = 128

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT+ VV+KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56  ILGRYYETGSIKPRAIGGSKPRVATSCVVTKIADYKRECPSIFAWEIRDRLLSEGVCNND 115

Query: 70  NIPS 73
            IPS
Sbjct: 116 TIPS 119


>gi|390349968|ref|XP_003727318.1| PREDICTED: paired box protein Pax-6-like isoform 2
           [Strongylocentrotus purpuratus]
          Length = 156

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT  VV++I+HYKRECPSIFAWEIRDRLL E +C+ +
Sbjct: 91  ILGRYYETGSIRPRAIGGSKPRVATPHVVTRIAHYKRECPSIFAWEIRDRLLAEKICNQE 150

Query: 70  NIPS 73
           NIPS
Sbjct: 151 NIPS 154


>gi|195469409|ref|XP_002099630.1| GE14563 [Drosophila yakuba]
 gi|194185731|gb|EDW99342.1| GE14563 [Drosophila yakuba]
          Length = 543

 Score =  110 bits (276), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 51/64 (79%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC++D
Sbjct: 81  ILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSD 140

Query: 70  NIPS 73
           NIPS
Sbjct: 141 NIPS 144


>gi|390349966|ref|XP_003727317.1| PREDICTED: paired box protein Pax-6-like isoform 1
           [Strongylocentrotus purpuratus]
          Length = 145

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT  VV++I+HYKRECPSIFAWEIRDRLL E +C+ +
Sbjct: 80  ILGRYYETGSIRPRAIGGSKPRVATPHVVTRIAHYKRECPSIFAWEIRDRLLAEKICNQE 139

Query: 70  NIPS 73
           NIPS
Sbjct: 140 NIPS 143


>gi|195564338|ref|XP_002105777.1| GD24416 [Drosophila simulans]
 gi|194201653|gb|EDX15229.1| GD24416 [Drosophila simulans]
          Length = 342

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 58/67 (86%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSI+PRAIGGSKPRVAT  VV KI+ YKRECPSIFAWEIRDRLL E VC
Sbjct: 78  VSKILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVC 137

Query: 67  SNDNIPS 73
           ++DNIPS
Sbjct: 138 NSDNIPS 144


>gi|78370178|gb|ABB43130.1| Pax-6 [Daphnia pulex]
          Length = 288

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/64 (79%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI+PRAIGGSKPRVAT+ VV+KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 65  ILGRYHETGSIKPRAIGGSKPRVATSCVVTKIADYKRECPSIFAWEIRDRLLSEGVCNND 124

Query: 70  NIPS 73
            IPS
Sbjct: 125 TIPS 128


>gi|1835186|emb|CAA71094.1| Pax-6 [Phallusia mammillata]
          Length = 464

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 58/64 (90%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETG+IRPRAIGGSKPRVAT +VV+KI+ YKRECPSIFAWEIRDRLL E VC+ +
Sbjct: 88  ILARYYETGTIRPRAIGGSKPRVATPQVVNKIAMYKRECPSIFAWEIRDRLLNEAVCNAE 147

Query: 70  NIPS 73
           NIPS
Sbjct: 148 NIPS 151


>gi|189313483|gb|ACD88758.1| Pax6 isoform 1 [Limulus polyphemus]
          Length = 145

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PR IGGSKPRVAT+ VV+KI+ YKRECPS+FAWEIRDRLL +GVC+++
Sbjct: 57  ILGRYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSE 116

Query: 70  NIPS 73
           NIPS
Sbjct: 117 NIPS 120


>gi|189313477|gb|ACD88755.1| Pax6 isoform 2 [Limulus polyphemus]
          Length = 456

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PR IGGSKPRVAT+ VV+KI+ YKRECPS+FAWEIRDRLL +GVC+++
Sbjct: 57  ILGRYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSE 116

Query: 70  NIPS 73
           NIPS
Sbjct: 117 NIPS 120


>gi|189313475|gb|ACD88754.1| Pax6 isoform 1 [Limulus polyphemus]
          Length = 456

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PR IGGSKPRVAT+ VV+KI+ YKRECPS+FAWEIRDRLL +GVC+++
Sbjct: 57  ILGRYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSE 116

Query: 70  NIPS 73
           NIPS
Sbjct: 117 NIPS 120


>gi|189313481|gb|ACD88757.1| Pax6 isoform 1 [Limulus polyphemus]
 gi|189313485|gb|ACD88759.1| Pax6 isoform 1 [Limulus polyphemus]
          Length = 174

 Score =  107 bits (267), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PR IGGSKPRVAT+ VV+KI+ YKRECPS+FAWEIRDRLL +GVC+++
Sbjct: 57  ILGRYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSE 116

Query: 70  NIPS 73
           NIPS
Sbjct: 117 NIPS 120


>gi|189313479|gb|ACD88756.1| Pax6 isoform 1 [Limulus polyphemus]
          Length = 183

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PR IGGSKPRVAT+ VV+KI+ YKRECPS+FAWEIRDRLL +GVC+++
Sbjct: 57  ILGRYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSE 116

Query: 70  NIPS 73
           NIPS
Sbjct: 117 NIPS 120


>gi|189313487|gb|ACD88760.1| Pax6 isoform 2 [Limulus polyphemus]
          Length = 178

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 59/64 (92%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+PR IGGSKPRVAT+ VV+KI+ YKRECPS+FAWEIRDRLL +GVC+++
Sbjct: 57  ILGRYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSE 116

Query: 70  NIPS 73
           NIPS
Sbjct: 117 NIPS 120


>gi|126671099|gb|ABN09916.2| paired box 6B transcription factor [Helobdella sp. MS-2000]
          Length = 432

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YK ECPSIFAWEIRDRLL E +C+ +
Sbjct: 51  ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKGECPSIFAWEIRDRLLSECLCTQE 110

Query: 70  NIPS 73
           NIPS
Sbjct: 111 NIPS 114


>gi|347963087|ref|XP_566364.4| AGAP000063-PA [Anopheles gambiae str. PEST]
 gi|333467366|gb|EAL41300.4| AGAP000063-PA [Anopheles gambiae str. PEST]
          Length = 564

 Score =  104 bits (260), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 57/67 (85%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRPRAIGGSKPRVAT EVV+KIS +K  CP+IFAWEIRD+LL E +C
Sbjct: 56  VSKILGRYYETGSIRPRAIGGSKPRVATPEVVNKISQFKNNCPNIFAWEIRDKLLNERIC 115

Query: 67  SNDNIPS 73
           + +NIPS
Sbjct: 116 TPENIPS 122


>gi|2394235|gb|AAB70245.1| paired box protein [Paracentrotus lividus]
          Length = 529

 Score =  104 bits (260), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/64 (71%), Positives = 55/64 (85%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VVSKI+ YKR+ P++FAWEIRDRLL EGVC  D
Sbjct: 68  ILGRYYETGSIRPGVIGGSKPKVATPKVVSKIADYKRQNPTMFAWEIRDRLLAEGVCEKD 127

Query: 70  NIPS 73
           N+PS
Sbjct: 128 NVPS 131


>gi|390351165|ref|XP_781786.3| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-2a-like
           [Strongylocentrotus purpuratus]
          Length = 557

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/64 (71%), Positives = 55/64 (85%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VVSKI+ YKR+ P++FAWEIRDRLL EGVC  D
Sbjct: 105 ILGRYYETGSIRPGVIGGSKPKVATPKVVSKIADYKRQNPTMFAWEIRDRLLAEGVCEKD 164

Query: 70  NIPS 73
           N+PS
Sbjct: 165 NVPS 168


>gi|157128224|ref|XP_001661352.1| paired box protein pax-6 [Aedes aegypti]
 gi|108882239|gb|EAT46464.1| AAEL002321-PA [Aedes aegypti]
          Length = 537

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/64 (71%), Positives = 57/64 (89%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRPRAIGGSKPRVAT EVV++IS +K+ CP+IFAWEIRD+LL E +C+ +
Sbjct: 59  ILGRYYETGSIRPRAIGGSKPRVATPEVVNRISMFKQNCPNIFAWEIRDKLLNERICTPE 118

Query: 70  NIPS 73
           NIPS
Sbjct: 119 NIPS 122


>gi|70570858|dbj|BAE06634.1| transcription factor protein [Ciona intestinalis]
          Length = 346

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT  VV KI  YKR+ P++FAWEIRDRLL EG+C +D
Sbjct: 84  ILARYYETGSIRPGVIGGSKPKVATPRVVEKICDYKRQNPTMFAWEIRDRLLSEGICDHD 143

Query: 70  NIPS 73
           N+PS
Sbjct: 144 NVPS 147


>gi|74136733|ref|NP_001027652.1| Pax-2/5/8 [Ciona intestinalis]
 gi|26017198|dbj|BAC41498.1| Pax-2/5/8 [Ciona intestinalis]
          Length = 341

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT  VV KI  YKR+ P++FAWEIRDRLL EG+C +D
Sbjct: 79  ILARYYETGSIRPGVIGGSKPKVATPRVVEKICDYKRQNPTMFAWEIRDRLLSEGICDHD 138

Query: 70  NIPS 73
           N+PS
Sbjct: 139 NVPS 142


>gi|308494689|ref|XP_003109533.1| CRE-VAB-3 protein [Caenorhabditis remanei]
 gi|308245723|gb|EFO89675.1| CRE-VAB-3 protein [Caenorhabditis remanei]
          Length = 462

 Score =  102 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 14/90 (15%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYE+G+IRPRAIGGSKPRVAT++VV KI  YKR+ PSIFAWEIRD+LL + +C+N+ IP
Sbjct: 60  RYYESGTIRPRAIGGSKPRVATSDVVEKIEEYKRDQPSIFAWEIRDKLLSDNICNNETIP 119

Query: 73  S--------------RECPSIFAWEIRDRL 88
           S              +E  +I   EI DR+
Sbjct: 120 SVSSINRVLRNLAAKKEQHTIMQTEIYDRI 149


>gi|145566915|sp|A0JMA6.2|PAX8_XENTR RecName: Full=Paired box protein Pax-8
          Length = 458

 Score =  102 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 70  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 129

Query: 70  NIPS 73
            +PS
Sbjct: 130 TVPS 133


>gi|283365209|dbj|BAI66187.1| transcription factor Pax-2/5/8 [Microciona prolifera]
          Length = 576

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/64 (71%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT  VVSKI  YK+E PSIFAWEIRDRLLQEG+C   
Sbjct: 64  ILGRYYETGSIKPGVIGGSKPKVATPNVVSKIEDYKQENPSIFAWEIRDRLLQEGICDKA 123

Query: 70  NIPS 73
           N+PS
Sbjct: 124 NVPS 127


>gi|341903373|gb|EGT59308.1| hypothetical protein CAEBREN_04513 [Caenorhabditis brenneri]
          Length = 473

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/61 (72%), Positives = 54/61 (88%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYE+G+IRPRAIGGSKPRVAT++VV KI  YKR+ PSIFAWEIRD+LL + +C+N+ IP
Sbjct: 72  RYYESGTIRPRAIGGSKPRVATSDVVEKIEEYKRDQPSIFAWEIRDKLLSDSICNNETIP 131

Query: 73  S 73
           S
Sbjct: 132 S 132


>gi|19032236|emb|CAC85262.2| Pax-6B protein [Dugesia japonica]
          Length = 579

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 57/68 (83%), Gaps = 4/68 (5%)

Query: 6   LLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGV 65
           +LC    RYY TGSI+P+AIGGSKPRVAT  VV K++ YK+E PS+FAWEIRDRLLQ+GV
Sbjct: 72  ILC----RYYGTGSIKPKAIGGSKPRVATNTVVRKVTIYKQESPSMFAWEIRDRLLQDGV 127

Query: 66  CSNDNIPS 73
           C+ DN+PS
Sbjct: 128 CNQDNLPS 135


>gi|4185914|emb|CAA09227.1| DtPax-6 protein [Girardia tigrina]
          Length = 577

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 54/61 (88%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSI+P+AIGGSKPRVAT  VV K++ YK+E PS+FAWEIRDR LQ+GVC+ DN+P
Sbjct: 75  RYYETGSIKPKAIGGSKPRVATNTVVRKVTIYKQESPSMFAWEIRDRPLQDGVCNQDNLP 134

Query: 73  S 73
           S
Sbjct: 135 S 135


>gi|345307674|ref|XP_001513168.2| PREDICTED: paired box protein Pax-2 [Ornithorhynchus anatinus]
          Length = 455

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|284413690|ref|NP_001072769.2| paired box protein Pax-8 [Xenopus (Silurana) tropicalis]
          Length = 466

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 78  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 137

Query: 70  NIPS 73
            +PS
Sbjct: 138 TVPS 141


>gi|3025754|gb|AAC12734.1| paired box protein Pax-2 beta isoform [Branchiostoma floridae]
          Length = 438

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 74  ILRRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDND 133

Query: 70  NIPS 73
            +PS
Sbjct: 134 TVPS 137


>gi|351701104|gb|EHB04023.1| Paired box protein Pax-8 [Heterocephalus glaber]
          Length = 483

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 85  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 144

Query: 70  NIPS 73
            +PS
Sbjct: 145 TVPS 148


>gi|344257890|gb|EGW13994.1| Paired box protein Pax-8 [Cricetulus griseus]
          Length = 452

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 75  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 134

Query: 70  NIPS 73
            +PS
Sbjct: 135 TVPS 138


>gi|426226366|ref|XP_004007315.1| PREDICTED: paired box protein Pax-8 [Ovis aries]
          Length = 525

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|395508739|ref|XP_003758667.1| PREDICTED: paired box protein Pax-8 [Sarcophilus harrisii]
          Length = 476

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 80  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 139

Query: 70  NIPS 73
            +PS
Sbjct: 140 TVPS 143


>gi|410035604|ref|XP_003309249.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-8 [Pan
           troglodytes]
          Length = 389

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|4107113|dbj|BAA36346.1| Pax-2/5/8 [Ephydatia fluviatilis]
          Length = 599

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT++VV KI  YK+E PSIFAWEIRDRLLQ+GVC   
Sbjct: 60  ILGRYYETGSIKPGVIGGSKPKVATSKVVLKIEDYKQENPSIFAWEIRDRLLQDGVCDKV 119

Query: 70  NIPS 73
           N+PS
Sbjct: 120 NVPS 123


>gi|345309812|ref|XP_003428884.1| PREDICTED: paired box protein Pax-8-like [Ornithorhynchus anatinus]
          Length = 569

 Score =  101 bits (251), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 149 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 208

Query: 70  NIPS 73
            +PS
Sbjct: 209 TVPS 212


>gi|348558521|ref|XP_003465066.1| PREDICTED: paired box protein Pax-8-like [Cavia porcellus]
          Length = 464

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 68  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|47223272|emb|CAF98656.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 513

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 90  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 149

Query: 70  NIPS 73
            +PS
Sbjct: 150 TVPS 153


>gi|6754990|ref|NP_035170.1| paired box protein Pax-8 [Mus musculus]
 gi|341942210|sp|Q00288.3|PAX8_MOUSE RecName: Full=Paired box protein Pax-8
 gi|53594|emb|CAA40725.1| Pax8 [Mus musculus]
 gi|1850881|emb|CAA67904.1| Pax-8 [Mus musculus]
 gi|18089001|gb|AAH20526.1| Paired box gene 8 [Mus musculus]
 gi|148676225|gb|EDL08172.1| paired box gene 8 [Mus musculus]
          Length = 457

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|444710505|gb|ELW51485.1| Paired box protein Pax-8 [Tupaia chinensis]
          Length = 472

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 66  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 125

Query: 70  NIPS 73
            +PS
Sbjct: 126 TVPS 129


>gi|281347767|gb|EFB23351.1| hypothetical protein PANDA_016017 [Ailuropoda melanoleuca]
          Length = 434

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|1346923|sp|P47240.1|PAX8_CANFA RecName: Full=Paired box protein Pax-8
 gi|619068|emb|CAA58571.1| Pax-8 [Canis lupus familiaris]
          Length = 459

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|354502554|ref|XP_003513349.1| PREDICTED: paired box protein Pax-8 [Cricetulus griseus]
          Length = 457

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|77020244|ref|NP_112403.2| paired box protein Pax-8 [Rattus norvegicus]
 gi|114152856|sp|P51974.2|PAX8_RAT RecName: Full=Paired box protein Pax-8
 gi|51859130|gb|AAH81779.1| Paired box 8 [Rattus norvegicus]
 gi|149039440|gb|EDL93660.1| paired box gene 8 [Rattus norvegicus]
          Length = 457

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|1122896|emb|CAA63930.1| Pax-8 [Rattus norvegicus]
          Length = 458

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|34878703|ref|NP_003981.2| paired box protein Pax-2 isoform e [Homo sapiens]
 gi|146327639|gb|AAI41453.1| Paired box 2 [synthetic construct]
 gi|151556558|gb|AAI48711.1| Paired box 2 [synthetic construct]
          Length = 431

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|344291542|ref|XP_003417494.1| PREDICTED: hypothetical protein LOC100674361 [Loxodonta africana]
          Length = 986

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 590 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 649

Query: 70  NIPS 73
            +PS
Sbjct: 650 TVPS 653


>gi|124054604|gb|ABM89503.1| Pax2 [Scyliorhinus canicula]
          Length = 299

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 55/64 (85%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 44  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 103

Query: 70  NIPS 73
           ++PS
Sbjct: 104 SVPS 107


>gi|148236521|ref|NP_001081941.1| paired box protein Pax-8 [Xenopus laevis]
 gi|82248181|sp|Q9PUK5.1|PAX8_XENLA RecName: Full=Paired box protein Pax-8; Short=XPax-8
 gi|5815457|gb|AAD52681.1|AF179301_1 Pax-8 DNA-binding transcription factor [Xenopus laevis]
          Length = 465

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL +GVC ND
Sbjct: 78  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLTDGVCDND 137

Query: 70  NIPS 73
            +PS
Sbjct: 138 TVPS 141


>gi|358414453|ref|XP_614504.6| PREDICTED: paired box protein Pax-8 isoform 3 [Bos taurus]
 gi|359070171|ref|XP_002691446.2| PREDICTED: paired box protein Pax-8 isoform 1 [Bos taurus]
          Length = 457

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|403303907|ref|XP_003942560.1| PREDICTED: paired box protein Pax-8 isoform 1 [Saimiri boliviensis
           boliviensis]
          Length = 456

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|395853596|ref|XP_003799290.1| PREDICTED: paired box protein Pax-8 isoform 1 [Otolemur garnettii]
          Length = 457

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|395828264|ref|XP_003787305.1| PREDICTED: paired box protein Pax-2 isoform 3 [Otolemur garnettii]
          Length = 432

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|190608784|gb|ACE79723.1| paired-box transcription factor 2/5/8 [Branchiostoma lanceolatum]
          Length = 302

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 52  ILRRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDND 111

Query: 70  NIPS 73
            +PS
Sbjct: 112 TVPS 115


>gi|117650664|gb|ABK54277.1| Pax-2 [Branchiostoma belcheri]
          Length = 445

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 74  ILRRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDND 133

Query: 70  NIPS 73
            +PS
Sbjct: 134 TVPS 137


>gi|441600330|ref|XP_003255143.2| PREDICTED: paired box protein Pax-2 isoform 1 [Nomascus leucogenys]
          Length = 434

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|296223303|ref|XP_002757563.1| PREDICTED: paired box protein Pax-8 [Callithrix jacchus]
          Length = 480

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|291404656|ref|XP_002718702.1| PREDICTED: paired box protein 2-like isoform 2 [Oryctolagus
           cuniculus]
          Length = 432

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|296221022|ref|XP_002756574.1| PREDICTED: paired box protein Pax-2 isoform 2 [Callithrix jacchus]
 gi|297301678|ref|XP_001108667.2| PREDICTED: paired box protein Pax-2 isoform 2 [Macaca mulatta]
 gi|297490874|ref|XP_002698479.1| PREDICTED: paired box protein Pax-2 isoform 2 [Bos taurus]
 gi|332834863|ref|XP_003312779.1| PREDICTED: paired box protein Pax-2 [Pan troglodytes]
 gi|335302113|ref|XP_003359379.1| PREDICTED: paired box protein Pax-2 isoform 4 [Sus scrofa]
 gi|397510273|ref|XP_003825524.1| PREDICTED: paired box protein Pax-2 isoform 3 [Pan paniscus]
 gi|403259706|ref|XP_003922343.1| PREDICTED: paired box protein Pax-2 isoform 3 [Saimiri boliviensis
           boliviensis]
 gi|410975910|ref|XP_003994370.1| PREDICTED: paired box protein Pax-2 isoform 3 [Felis catus]
 gi|119570200|gb|EAW49815.1| paired box gene 2, isoform CRA_g [Homo sapiens]
 gi|296472775|tpg|DAA14890.1| TPA: paired box protein 2-like isoform 2 [Bos taurus]
          Length = 432

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|5803117|ref|NP_003457.1| paired box protein Pax-8 isoform PAX8A [Homo sapiens]
 gi|215273928|sp|Q06710.2|PAX8_HUMAN RecName: Full=Paired box protein Pax-8
 gi|307321|gb|AAA03539.1| paired box homeotic protein [Homo sapiens]
 gi|12654465|gb|AAH01060.1| Paired box 8 [Homo sapiens]
 gi|62630135|gb|AAX88880.1| unknown [Homo sapiens]
 gi|119594035|gb|EAW73629.1| paired box gene 8, isoform CRA_a [Homo sapiens]
 gi|119594038|gb|EAW73632.1| paired box gene 8, isoform CRA_a [Homo sapiens]
 gi|123982930|gb|ABM83206.1| paired box gene 8 [synthetic construct]
 gi|123997609|gb|ABM86406.1| paired box gene 8 [synthetic construct]
 gi|158257814|dbj|BAF84880.1| unnamed protein product [Homo sapiens]
 gi|261860268|dbj|BAI46656.1| paired box 8 [synthetic construct]
          Length = 450

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|55732749|emb|CAH93072.1| hypothetical protein [Pongo abelii]
          Length = 456

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|327478430|ref|NP_001126820.1| paired box protein Pax-8 isoform 2 [Pongo abelii]
 gi|397465516|ref|XP_003804538.1| PREDICTED: paired box protein Pax-8 isoform 1 [Pan paniscus]
 gi|426336900|ref|XP_004031692.1| PREDICTED: paired box protein Pax-8 isoform 1 [Gorilla gorilla
           gorilla]
          Length = 456

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|34878716|ref|NP_003980.2| paired box protein Pax-2 isoform d [Homo sapiens]
          Length = 408

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|260837575|ref|XP_002613740.1| paired box protein [Branchiostoma floridae]
 gi|229299129|gb|EEN69749.1| paired box protein [Branchiostoma floridae]
          Length = 453

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 74  ILRRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDND 133

Query: 70  NIPS 73
            +PS
Sbjct: 134 TVPS 137


>gi|440910792|gb|ELR60550.1| Paired box protein Pax-8, partial [Bos grunniens mutus]
          Length = 457

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|402891973|ref|XP_003909202.1| PREDICTED: paired box protein Pax-8 isoform 1 [Papio anubis]
          Length = 456

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|109104286|ref|XP_001093559.1| PREDICTED: paired box protein Pax-8 isoform 7 [Macaca mulatta]
          Length = 456

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|3025752|gb|AAC12733.1| paired box protein Pax-2 alpha isoform [Branchiostoma floridae]
          Length = 445

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 74  ILRRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDND 133

Query: 70  NIPS 73
            +PS
Sbjct: 134 TVPS 137


>gi|4377875|gb|AAD19292.1| paired box protein pax2.1 splice variant, partial [Danio rerio]
          Length = 404

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 71  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 130

Query: 70  NIPS 73
            +PS
Sbjct: 131 TVPS 134


>gi|355566008|gb|EHH22437.1| hypothetical protein EGK_05699 [Macaca mulatta]
          Length = 456

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|301781915|ref|XP_002926373.1| PREDICTED: paired box protein Pax-8-like [Ailuropoda melanoleuca]
          Length = 458

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|207079997|ref|NP_001128942.1| paired box protein Pax-8 isoform 1 [Pongo abelii]
 gi|75070686|sp|Q5R9M8.1|PAX8_PONAB RecName: Full=Paired box protein Pax-8
 gi|55729606|emb|CAH91532.1| hypothetical protein [Pongo abelii]
          Length = 457

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/61 (73%), Positives = 51/61 (83%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND +P
Sbjct: 65  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 124

Query: 73  S 73
           S
Sbjct: 125 S 125


>gi|268578283|ref|XP_002644124.1| Hypothetical protein CBG04481 [Caenorhabditis briggsae]
          Length = 364

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 54/61 (88%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYE+G+IRPRAIGGSKPRVAT++VV KI  YKR+ PSIFAWEIRD+LL + +C+N+ IP
Sbjct: 117 RYYESGTIRPRAIGGSKPRVATSDVVEKIEEYKRDQPSIFAWEIRDKLLSDNICNNETIP 176

Query: 73  S 73
           S
Sbjct: 177 S 177


>gi|395828268|ref|XP_003787307.1| PREDICTED: paired box protein Pax-2 isoform 5 [Otolemur garnettii]
          Length = 409

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|441600333|ref|XP_004087603.1| PREDICTED: paired box protein Pax-2 isoform 2 [Nomascus leucogenys]
          Length = 411

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|355751594|gb|EHH55849.1| hypothetical protein EGM_05133 [Macaca fascicularis]
          Length = 450

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|334313412|ref|XP_001377012.2| PREDICTED: paired box protein Pax-8-like [Monodelphis domestica]
          Length = 583

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 187 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 246

Query: 70  NIPS 73
            +PS
Sbjct: 247 TVPS 250


>gi|291404654|ref|XP_002718701.1| PREDICTED: paired box protein 2-like isoform 1 [Oryctolagus
           cuniculus]
          Length = 409

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|296221020|ref|XP_002756573.1| PREDICTED: paired box protein Pax-2 isoform 1 [Callithrix jacchus]
 gi|297301676|ref|XP_001108620.2| PREDICTED: paired box protein Pax-2 isoform 1 [Macaca mulatta]
 gi|297490872|ref|XP_002698478.1| PREDICTED: paired box protein Pax-2 isoform 1 [Bos taurus]
 gi|332834861|ref|XP_003312777.1| PREDICTED: paired box protein Pax-2 [Pan troglodytes]
 gi|335302117|ref|XP_003359380.1| PREDICTED: paired box protein Pax-2 isoform 5 [Sus scrofa]
 gi|397510271|ref|XP_003825523.1| PREDICTED: paired box protein Pax-2 isoform 2 [Pan paniscus]
 gi|403259708|ref|XP_003922344.1| PREDICTED: paired box protein Pax-2 isoform 4 [Saimiri boliviensis
           boliviensis]
 gi|410975912|ref|XP_003994371.1| PREDICTED: paired box protein Pax-2 isoform 4 [Felis catus]
 gi|119570194|gb|EAW49809.1| paired box gene 2, isoform CRA_a [Homo sapiens]
 gi|296472774|tpg|DAA14889.1| TPA: paired box protein 2-like isoform 1 [Bos taurus]
 gi|431838899|gb|ELK00828.1| Paired box protein Pax-2 [Pteropus alecto]
          Length = 409

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|351715587|gb|EHB18506.1| Paired box protein Pax-2 [Heterocephalus glaber]
          Length = 702

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 100 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 159

Query: 70  NIPS 73
            +PS
Sbjct: 160 TVPS 163


>gi|4377873|gb|AAD19291.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 330

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|25247297|gb|AAN72308.1| transcription factor Pax8 [Mus musculus]
          Length = 251

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 52  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 111

Query: 70  NIPS 73
            +PS
Sbjct: 112 TVPS 115


>gi|301756120|ref|XP_002913953.1| PREDICTED: paired box protein Pax-2-like [Ailuropoda melanoleuca]
          Length = 424

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|4377865|gb|AAD19287.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 334

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 71  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 130

Query: 70  NIPS 73
            +PS
Sbjct: 131 TVPS 134


>gi|208435491|pdb|2K27|A Chain A, Solution Structure Of Human Pax8 Paired Box Domain
          Length = 159

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|395828260|ref|XP_003787303.1| PREDICTED: paired box protein Pax-2 isoform 1 [Otolemur garnettii]
          Length = 417

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|7669542|ref|NP_054698.1| paired box protein Pax-8 isoform PAX8E [Homo sapiens]
 gi|397465522|ref|XP_003804541.1| PREDICTED: paired box protein Pax-8 isoform 4 [Pan paniscus]
 gi|426336906|ref|XP_004031695.1| PREDICTED: paired box protein Pax-8 isoform 4 [Gorilla gorilla
           gorilla]
 gi|7524546|gb|AAB34218.2| paired box protein 8 isoform 3 [Homo sapiens]
 gi|119594042|gb|EAW73636.1| paired box gene 8, isoform CRA_e [Homo sapiens]
          Length = 287

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|358414455|ref|XP_003582838.1| PREDICTED: paired box protein Pax-8 isoform 1 [Bos taurus]
 gi|359070174|ref|XP_003586691.1| PREDICTED: paired box protein Pax-8 isoform 2 [Bos taurus]
          Length = 405

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|395853598|ref|XP_003799291.1| PREDICTED: paired box protein Pax-8 isoform 2 [Otolemur garnettii]
          Length = 405

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|441643170|ref|XP_003277748.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-8 isoform 1
           [Nomascus leucogenys]
          Length = 460

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|4377881|gb|AAD19295.1| paired box protein pax2.1 splice variant, partial [Danio rerio]
          Length = 400

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|1469415|gb|AAC63385.1| paired-box protein PAX2 [Homo sapiens]
          Length = 416

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|21264493|sp|Q90268.2|PAX2A_DANRE RecName: Full=Paired box protein Pax-2a; AltName: Full=No isthmus
           protein; AltName: Full=Pax[Zf-b]
 gi|4377869|gb|AAD19289.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 410

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 71  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 130

Query: 70  NIPS 73
            +PS
Sbjct: 131 TVPS 134


>gi|328712072|ref|XP_003244722.1| PREDICTED: hypothetical protein LOC100159241 isoform 2
           [Acyrthosiphon pisum]
          Length = 651

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VATA VV  I++YKRE P++FAWEIRDRLL EGVC+ D
Sbjct: 113 ILSRYYETGSFKAGVIGGSKPKVATAPVVDSIANYKRENPTMFAWEIRDRLLAEGVCTQD 172

Query: 70  NIPS 73
           N+PS
Sbjct: 173 NVPS 176


>gi|34878699|ref|NP_003978.2| paired box protein Pax-2 isoform a [Homo sapiens]
          Length = 416

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|431913109|gb|ELK14859.1| Paired box protein Pax-8 [Pteropus alecto]
          Length = 446

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 86  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 145

Query: 70  NIPS 73
            +PS
Sbjct: 146 TVPS 149


>gi|297301682|ref|XP_001108772.2| PREDICTED: paired box protein Pax-2 isoform 4 [Macaca mulatta]
 gi|297490878|ref|XP_002698481.1| PREDICTED: paired box protein Pax-2 isoform 4 [Bos taurus]
 gi|332834857|ref|XP_001168828.2| PREDICTED: paired box protein Pax-2 isoform 6 [Pan troglodytes]
 gi|335302109|ref|XP_003359377.1| PREDICTED: paired box protein Pax-2 isoform 2 [Sus scrofa]
 gi|223590261|sp|Q02962.4|PAX2_HUMAN RecName: Full=Paired box protein Pax-2
 gi|119570201|gb|EAW49816.1| paired box gene 2, isoform CRA_h [Homo sapiens]
 gi|296472777|tpg|DAA14892.1| TPA: paired box protein 2-like isoform 4 [Bos taurus]
          Length = 417

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|449505111|ref|XP_004174845.1| PREDICTED: paired box protein Pax-2-A [Taeniopygia guttata]
          Length = 354

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|4377877|gb|AAD19293.1| paired box protein pax2.1 splice variant, partial [Danio rerio]
          Length = 389

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 71  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 130

Query: 70  NIPS 73
            +PS
Sbjct: 131 TVPS 134


>gi|390473028|ref|XP_002756575.2| PREDICTED: paired box protein Pax-2 isoform 3 [Callithrix jacchus]
 gi|397510269|ref|XP_003825522.1| PREDICTED: paired box protein Pax-2 isoform 1 [Pan paniscus]
 gi|403259704|ref|XP_003922342.1| PREDICTED: paired box protein Pax-2 isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|410975908|ref|XP_003994369.1| PREDICTED: paired box protein Pax-2 isoform 2 [Felis catus]
 gi|119570199|gb|EAW49814.1| paired box gene 2, isoform CRA_f [Homo sapiens]
          Length = 416

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|348528971|ref|XP_003451988.1| PREDICTED: paired box protein Pax-2a-like isoform 1 [Oreochromis
           niloticus]
          Length = 406

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|334350733|gb|AEG77355.1| paired box 2 transcript variant 3 [Columba livia]
          Length = 352

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 66  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 125

Query: 70  NIPS 73
            +PS
Sbjct: 126 TVPS 129


>gi|3523158|gb|AAC34300.1| transcription factor [Takifugu rubripes]
          Length = 392

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
           ++PS
Sbjct: 127 SVPS 130


>gi|296482542|tpg|DAA24657.1| TPA: paired box 8 [Bos taurus]
          Length = 560

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 164 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 223

Query: 70  NIPS 73
            +PS
Sbjct: 224 TVPS 227


>gi|410901162|ref|XP_003964065.1| PREDICTED: paired box protein Pax-2-A-like isoform 2 [Takifugu
           rubripes]
          Length = 406

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|291404660|ref|XP_002718704.1| PREDICTED: paired box protein 2-like isoform 4 [Oryctolagus
           cuniculus]
          Length = 421

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|397465518|ref|XP_003804539.1| PREDICTED: paired box protein Pax-8 isoform 2 [Pan paniscus]
 gi|426336902|ref|XP_004031693.1| PREDICTED: paired box protein Pax-8 isoform 2 [Gorilla gorilla
           gorilla]
          Length = 404

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|440912433|gb|ELR62003.1| Paired box protein Pax-2 [Bos grunniens mutus]
          Length = 425

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 72  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 131

Query: 70  NIPS 73
            +PS
Sbjct: 132 TVPS 135


>gi|403303909|ref|XP_003942561.1| PREDICTED: paired box protein Pax-8 isoform 2 [Saimiri boliviensis
           boliviensis]
          Length = 404

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|432113065|gb|ELK35643.1| Paired box protein Pax-2 [Myotis davidii]
          Length = 664

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|157823605|ref|NP_001099831.1| paired box protein Pax-2 [Rattus norvegicus]
 gi|149040253|gb|EDL94291.1| paired box gene 2 (predicted) [Rattus norvegicus]
          Length = 416

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|148709990|gb|EDL41936.1| paired box gene 2 [Mus musculus]
          Length = 416

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|4377861|gb|AAD19285.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 406

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|348529510|ref|XP_003452256.1| PREDICTED: paired box protein Pax-5-like isoform 3 [Oreochromis
           niloticus]
          Length = 396

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
           ++PS
Sbjct: 127 SVPS 130


>gi|2765063|emb|CAA71209.1| paired box protein [Xenopus laevis]
          Length = 354

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|402891975|ref|XP_003909203.1| PREDICTED: paired box protein Pax-8 isoform 2 [Papio anubis]
          Length = 404

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|324508780|gb|ADY43703.1| Paired box protein Pax-6 [Ascaris suum]
          Length = 470

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/61 (77%), Positives = 50/61 (81%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYE+G+IRPRAIGGSKPRVAT  V  KI  YKRE PSIFAWEIRD+LL E VCS D IP
Sbjct: 63  RYYESGTIRPRAIGGSKPRVATVNVCDKIESYKREQPSIFAWEIRDKLLNEKVCSADTIP 122

Query: 73  S 73
           S
Sbjct: 123 S 123


>gi|119594043|gb|EAW73637.1| paired box gene 8, isoform CRA_f [Homo sapiens]
 gi|119594045|gb|EAW73639.1| paired box gene 8, isoform CRA_f [Homo sapiens]
          Length = 387

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|4377871|gb|AAD19290.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 292

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|119570195|gb|EAW49810.1| paired box gene 2, isoform CRA_b [Homo sapiens]
          Length = 421

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|37723146|gb|AAN77899.1| paired box transcription factor [Homo sapiens]
          Length = 308

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 72  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 131

Query: 70  NIPS 73
            +PS
Sbjct: 132 TVPS 135


>gi|71987648|ref|NP_001024570.1| Protein VAB-3, isoform a [Caenorhabditis elegans]
 gi|965066|gb|AAA82991.1| variable abnormal-3 [Caenorhabditis elegans]
 gi|6434263|emb|CAA90186.2| Protein VAB-3, isoform a [Caenorhabditis elegans]
 gi|1583405|prf||2120399A vab-3 gene
          Length = 455

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/61 (72%), Positives = 54/61 (88%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYE+G+IRPRAIGGSKPRVAT++VV KI  YKR+ PSIFAWEIRD+LL + +C+N+ IP
Sbjct: 60  RYYESGTIRPRAIGGSKPRVATSDVVEKIEDYKRDQPSIFAWEIRDKLLADNICNNETIP 119

Query: 73  S 73
           S
Sbjct: 120 S 120


>gi|109104288|ref|XP_001093332.1| PREDICTED: paired box protein Pax-8 isoform 5 [Macaca mulatta]
          Length = 387

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|7524363|ref|NP_039246.1| paired box protein Pax-8 isoform PAX8C [Homo sapiens]
 gi|998701|gb|AAB34216.1| PAX8 [Homo sapiens]
 gi|119594040|gb|EAW73634.1| paired box gene 8, isoform CRA_d [Homo sapiens]
 gi|119594044|gb|EAW73638.1| paired box gene 8, isoform CRA_d [Homo sapiens]
          Length = 398

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|348578465|ref|XP_003475003.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-2-like
           [Cavia porcellus]
          Length = 390

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|344248142|gb|EGW04246.1| Paired box protein Pax-2 [Cricetulus griseus]
          Length = 503

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 99  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 158

Query: 70  NIPS 73
            +PS
Sbjct: 159 TVPS 162


>gi|205371810|sp|P32114.2|PAX2_MOUSE RecName: Full=Paired box protein Pax-2
          Length = 414

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|50979044|ref|NP_001003248.1| paired box protein Pax-8 [Canis lupus familiaris]
 gi|619070|emb|CAA58572.1| Pax-8 [Canis lupus familiaris]
          Length = 413

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|17227115|gb|AAL38015.1| PAX6 [Mus musculus]
          Length = 352

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/53 (86%), Positives = 50/53 (94%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQ 62
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL+
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLR 108


>gi|395828262|ref|XP_003787304.1| PREDICTED: paired box protein Pax-2 isoform 2 [Otolemur garnettii]
          Length = 394

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|4377883|gb|AAD19296.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 395

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 71  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 130

Query: 70  NIPS 73
            +PS
Sbjct: 131 TVPS 134


>gi|395502299|ref|XP_003755519.1| PREDICTED: paired box protein Pax-2 [Sarcophilus harrisii]
          Length = 570

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 84  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 143

Query: 70  NIPS 73
            +PS
Sbjct: 144 TVPS 147


>gi|409139|gb|AAA60024.1| paired-box protein [Homo sapiens]
          Length = 393

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|34878701|ref|NP_000269.2| paired box protein Pax-2 isoform b [Homo sapiens]
          Length = 393

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|291404658|ref|XP_002718703.1| PREDICTED: paired box protein 2-like isoform 3 [Oryctolagus
           cuniculus]
          Length = 394

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|297301680|ref|XP_001108817.2| PREDICTED: paired box protein Pax-2 isoform 5 [Macaca mulatta]
 gi|297490876|ref|XP_002698480.1| PREDICTED: paired box protein Pax-2 isoform 3 [Bos taurus]
 gi|332834855|ref|XP_001168808.2| PREDICTED: paired box protein Pax-2 isoform 5 [Pan troglodytes]
 gi|335302111|ref|XP_003359378.1| PREDICTED: paired box protein Pax-2 isoform 3 [Sus scrofa]
 gi|410975906|ref|XP_003994368.1| PREDICTED: paired box protein Pax-2 isoform 1 [Felis catus]
 gi|119570198|gb|EAW49813.1| paired box gene 2, isoform CRA_e [Homo sapiens]
 gi|296472776|tpg|DAA14891.1| TPA: paired box protein 2-like isoform 3 [Bos taurus]
          Length = 394

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|4377879|gb|AAD19294.1| paired box protein pax2.1 splice variant, partial [Danio rerio]
          Length = 385

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|358414457|ref|XP_003582839.1| PREDICTED: paired box protein Pax-8 isoform 2 [Bos taurus]
 gi|359070177|ref|XP_003586692.1| PREDICTED: paired box protein Pax-8 isoform 3 [Bos taurus]
          Length = 322

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|295844823|ref|NP_001171523.1| paired box protein Pax-2 [Ovis aries]
 gi|390473030|ref|XP_003734556.1| PREDICTED: paired box protein Pax-2 [Callithrix jacchus]
 gi|403259702|ref|XP_003922341.1| PREDICTED: paired box protein Pax-2 isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|208966986|dbj|BAG73507.1| paired box 2 [synthetic construct]
 gi|295016251|emb|CBI70347.1| paired box 2 [Ovis aries]
          Length = 393

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|326537335|ref|NP_035167.4| paired box protein Pax-2 [Mus musculus]
 gi|152012463|gb|AAI50485.1| Pax2 protein [Mus musculus]
 gi|157279304|gb|AAI48233.1| Pax2 protein [Mus musculus]
          Length = 394

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|338716466|ref|XP_001500035.3| PREDICTED: paired box protein Pax-2-like [Equus caballus]
          Length = 489

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 129 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 188

Query: 70  NIPS 73
            +PS
Sbjct: 189 TVPS 192


>gi|317419497|emb|CBN81534.1| Paired box protein Pax-2a [Dicentrarchus labrax]
          Length = 387

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|83776614|ref|NP_001032960.1| transcription factor pax5 [Takifugu rubripes]
 gi|76559836|dbj|BAE45316.1| transcription factor PAX5 [Takifugu rubripes]
          Length = 424

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
           ++PS
Sbjct: 127 SVPS 130


>gi|254039691|ref|NP_571713.1| paired box protein Pax-5 [Danio rerio]
          Length = 396

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
           ++PS
Sbjct: 128 SVPS 131


>gi|348528973|ref|XP_003451989.1| PREDICTED: paired box protein Pax-2a-like isoform 2 [Oreochromis
           niloticus]
          Length = 391

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|426365948|ref|XP_004050028.1| PREDICTED: paired box protein Pax-2 [Gorilla gorilla gorilla]
          Length = 441

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 72  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 131

Query: 70  NIPS 73
            +PS
Sbjct: 132 TVPS 135


>gi|119570196|gb|EAW49811.1| paired box gene 2, isoform CRA_c [Homo sapiens]
          Length = 399

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|426253357|ref|XP_004020363.1| PREDICTED: uncharacterized protein LOC101111924 [Ovis aries]
          Length = 915

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/70 (62%), Positives = 54/70 (77%)

Query: 4   LTLLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
           L       +RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E
Sbjct: 429 LPAAAAFSYRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAE 488

Query: 64  GVCSNDNIPS 73
           G+C ND +PS
Sbjct: 489 GICDNDTVPS 498


>gi|410901160|ref|XP_003964064.1| PREDICTED: paired box protein Pax-2-A-like isoform 1 [Takifugu
           rubripes]
          Length = 391

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|4377867|gb|AAD19288.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 351

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|348529508|ref|XP_003452255.1| PREDICTED: paired box protein Pax-5-like isoform 2 [Oreochromis
           niloticus]
          Length = 392

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
           ++PS
Sbjct: 127 SVPS 130


>gi|348529506|ref|XP_003452254.1| PREDICTED: paired box protein Pax-5-like isoform 1 [Oreochromis
           niloticus]
          Length = 424

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
           ++PS
Sbjct: 127 SVPS 130


>gi|18859203|ref|NP_571259.1| paired box protein Pax-2a [Danio rerio]
 gi|62551|emb|CAA45378.1| pax[zf-b] [Danio rerio]
 gi|4377863|gb|AAD19286.1| paired box protein pax2.1 splice variant [Danio rerio]
 gi|45219816|gb|AAH66690.1| Paired box gene 2a [Danio rerio]
          Length = 391

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|224052465|ref|XP_002197955.1| PREDICTED: paired box protein Pax-2-A isoform 2 [Taeniopygia
           guttata]
          Length = 394

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|185135004|ref|NP_001118154.1| Pax-5 protein [Oncorhynchus mykiss]
 gi|157688387|gb|ABV64840.1| Pax-5 [Oncorhynchus mykiss]
          Length = 396

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 69  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 128

Query: 70  NIPS 73
           ++PS
Sbjct: 129 SVPS 132


>gi|45382169|ref|NP_990124.1| paired box protein Pax-2 [Gallus gallus]
 gi|6683012|dbj|BAA88987.1| paired-box containing protein Pax-2 [Gallus gallus]
          Length = 394

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|449505115|ref|XP_004174846.1| PREDICTED: paired box protein Pax-2-A [Taeniopygia guttata]
          Length = 326

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|444708269|gb|ELW49361.1| Paired box protein Pax-2a [Tupaia chinensis]
          Length = 441

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 62  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 121

Query: 70  NIPS 73
            +PS
Sbjct: 122 TVPS 125


>gi|410901164|ref|XP_003964066.1| PREDICTED: paired box protein Pax-2-A-like isoform 3 [Takifugu
           rubripes]
          Length = 461

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|395741954|ref|XP_003780401.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-2 [Pongo
           abelii]
          Length = 640

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|354500707|ref|XP_003512439.1| PREDICTED: paired box protein Pax-2-like [Cricetulus griseus]
          Length = 633

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 92  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 151

Query: 70  NIPS 73
            +PS
Sbjct: 152 TVPS 155


>gi|348528975|ref|XP_003451990.1| PREDICTED: paired box protein Pax-2a-like isoform 3 [Oreochromis
           niloticus]
          Length = 351

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|334350729|gb|AEG77353.1| paired box 2 transcript variant 1 [Columba livia]
          Length = 392

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 66  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 125

Query: 70  NIPS 73
            +PS
Sbjct: 126 TVPS 129


>gi|334314358|ref|XP_003340030.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-2-like
           [Monodelphis domestica]
          Length = 394

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|47212528|emb|CAF93848.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 218

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 83  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGVCDND 142

Query: 70  NIPS 73
            +PS
Sbjct: 143 TVPS 146


>gi|335308513|ref|XP_003361260.1| PREDICTED: paired box protein Pax-8-like [Sus scrofa]
          Length = 437

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 84  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 143

Query: 70  NIPS 73
            +PS
Sbjct: 144 TVPS 147


>gi|2765055|emb|CAA71205.1| paired box protein [Xenopus laevis]
          Length = 394

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|241681430|ref|XP_002411608.1| paired box protein Pax-6, putative [Ixodes scapularis]
 gi|215504348|gb|EEC13842.1| paired box protein Pax-6, putative [Ixodes scapularis]
          Length = 433

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 52/57 (91%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           ++ RYYETGSIRPRAIGGSKPRVAT +VVSKI+ +KRECPSIFAWEIRDRLL EG+ 
Sbjct: 56  ILGRYYETGSIRPRAIGGSKPRVATPDVVSKIAGFKRECPSIFAWEIRDRLLSEGIV 112


>gi|148880125|sp|O57685.2|PAX2A_XENLA RecName: Full=Paired box protein Pax-2-A; Short=xPax-2a
          Length = 497

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|33585947|gb|AAH55960.1| Pax2-A protein [Xenopus laevis]
          Length = 256

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|7524365|ref|NP_039247.1| paired box protein Pax-8 isoform PAX8D [Homo sapiens]
 gi|397465520|ref|XP_003804540.1| PREDICTED: paired box protein Pax-8 isoform 3 [Pan paniscus]
 gi|426336904|ref|XP_004031694.1| PREDICTED: paired box protein Pax-8 isoform 3 [Gorilla gorilla
           gorilla]
 gi|7524505|gb|AAB34217.2| paired box protein 8 isoform d [Homo sapiens]
 gi|119594037|gb|EAW73631.1| paired box gene 8, isoform CRA_c [Homo sapiens]
 gi|119594041|gb|EAW73635.1| paired box gene 8, isoform CRA_c [Homo sapiens]
          Length = 321

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|334350735|gb|AEG77356.1| paired box 2 transcript variant 4 [Columba livia]
          Length = 324

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 66  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 125

Query: 70  NIPS 73
            +PS
Sbjct: 126 TVPS 129


>gi|194725041|dbj|BAG66241.1| transcription factor PAX5 [Carassius auratus langsdorfii]
          Length = 423

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
           ++PS
Sbjct: 128 SVPS 131


>gi|440572047|gb|AGC12568.1| Pax258 [Platynereis dumerilii]
          Length = 427

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP  IGGSKP+VAT +VV  I  YKRE P++FAWEIRDRLL EGVC  +
Sbjct: 114 ILGRYYETGSVRPGVIGGSKPKVATPKVVGAICKYKRENPTMFAWEIRDRLLAEGVCDQE 173

Query: 70  NIPS 73
           N+PS
Sbjct: 174 NVPS 177


>gi|328712070|ref|XP_001943420.2| PREDICTED: hypothetical protein LOC100159241 isoform 1
           [Acyrthosiphon pisum]
          Length = 645

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VATA VV  I++YKRE P++FAWEIRDRLL EGVC+ D
Sbjct: 106 ILSRYYETGSFKAGVIGGSKPKVATAPVVDSIANYKRENPTMFAWEIRDRLLAEGVCTQD 165

Query: 70  NIPS 73
           N+PS
Sbjct: 166 NVPS 169


>gi|8920364|emb|CAB96397.1| transcription factor [Phallusia mammillata]
          Length = 680

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL +G+C+ +
Sbjct: 138 ILARYYETGSIRPGVIGGSKPKVATQDVVVKITEYKRDNPTMFAWEIRDRLLSDGICTGE 197

Query: 70  NIPS 73
            +PS
Sbjct: 198 TVPS 201


>gi|50604081|gb|AAH77463.1| Unknown (protein for MGC:82453) [Xenopus laevis]
          Length = 291

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|2765057|emb|CAA71206.1| paired box protein [Xenopus laevis]
          Length = 462

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|2764532|emb|CAA04224.1| paired box gene [Xenopus laevis]
          Length = 290

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|18448649|gb|AAL69892.1| Pax2.1 protein [Takifugu rubripes]
          Length = 135

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|410895441|ref|XP_003961208.1| PREDICTED: paired box protein Pax-2-B-like isoform 2 [Takifugu
           rubripes]
          Length = 349

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|281352041|gb|EFB27625.1| hypothetical protein PANDA_001742 [Ailuropoda melanoleuca]
          Length = 412

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 60  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 119

Query: 70  NIPS 73
            +PS
Sbjct: 120 TVPS 123


>gi|113205558|ref|NP_001037888.1| paired box 2 [Xenopus (Silurana) tropicalis]
 gi|89268642|emb|CAJ82432.1| paired box gene 2 [Xenopus (Silurana) tropicalis]
          Length = 140

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|410895439|ref|XP_003961207.1| PREDICTED: paired box protein Pax-2-B-like isoform 1 [Takifugu
           rubripes]
          Length = 387

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|325980250|gb|ADZ48384.1| Pax2 [Polyodon spathula]
          Length = 284

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/60 (71%), Positives = 51/60 (85%)

Query: 14 YYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIPS 73
          YYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND +PS
Sbjct: 2  YYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGVCDNDTVPS 61


>gi|7595811|gb|AAF64460.1|AF241310_1 transcription factor PaxB [Acropora millepora]
          Length = 571

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/61 (72%), Positives = 52/61 (85%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           R+YETGSI+P  IGGSKP+VAT  VV+KI+ YKR  P++FAWEIRDRLL EGVCS DN+P
Sbjct: 63  RFYETGSIKPGVIGGSKPKVATGPVVNKIAEYKRNNPTMFAWEIRDRLLSEGVCSTDNVP 122

Query: 73  S 73
           S
Sbjct: 123 S 123


>gi|355562710|gb|EHH19304.1| hypothetical protein EGK_19984 [Macaca mulatta]
 gi|355783029|gb|EHH64950.1| hypothetical protein EGM_18284 [Macaca fascicularis]
          Length = 419

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|2344869|emb|CAB09696.1| PAX2 [Oryzias latipes]
          Length = 361

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 52/61 (85%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND +P
Sbjct: 72  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 131

Query: 73  S 73
           S
Sbjct: 132 S 132


>gi|344274435|ref|XP_003409022.1| PREDICTED: hypothetical protein LOC100664929 [Loxodonta africana]
          Length = 905

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 118 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 177

Query: 70  NIPS 73
            +PS
Sbjct: 178 TVPS 181


>gi|359323187|ref|XP_851539.3| PREDICTED: paired box protein Pax-2 [Canis lupus familiaris]
          Length = 397

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 66  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 125

Query: 70  NIPS 73
            +PS
Sbjct: 126 TVPS 129


>gi|335302115|ref|XP_003133216.2| PREDICTED: paired box protein Pax-2 isoform 1 [Sus scrofa]
          Length = 396

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|194678984|ref|XP_001787759.1| PREDICTED: uncharacterized protein LOC789450 [Bos taurus]
          Length = 797

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 728 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 787

Query: 70  NIPS 73
            +PS
Sbjct: 788 TVPS 791


>gi|432846335|ref|XP_004065886.1| PREDICTED: paired box protein Pax-2-B-like [Oryzias latipes]
          Length = 382

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
           ++PS
Sbjct: 127 SVPS 130


>gi|348536276|ref|XP_003455623.1| PREDICTED: paired box protein Pax-8-like [Oreochromis niloticus]
          Length = 482

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC +D
Sbjct: 77  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDSD 136

Query: 70  NIPS 73
            +PS
Sbjct: 137 TVPS 140


>gi|195450779|ref|XP_002072629.1| GK13586 [Drosophila willistoni]
 gi|194168714|gb|EDW83615.1| GK13586 [Drosophila willistoni]
          Length = 935

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 279 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQD 338

Query: 70  NIPS 73
           N+PS
Sbjct: 339 NVPS 342


>gi|195402209|ref|XP_002059699.1| GJ13730 [Drosophila virilis]
 gi|194155913|gb|EDW71097.1| GJ13730 [Drosophila virilis]
          Length = 863

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 220 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQD 279

Query: 70  NIPS 73
           N+PS
Sbjct: 280 NVPS 283


>gi|553607|gb|AAC41711.1| paired-box protein [Homo sapiens]
          Length = 135

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|269784953|ref|NP_001161628.1| eyegone [Saccoglossus kowalevskii]
 gi|268054261|gb|ACY92617.1| PaxB transcription factor [Saccoglossus kowalevskii]
 gi|283464079|gb|ADB22623.1| Pax6-like protein [Saccoglossus kowalevskii]
          Length = 385

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           L  RYYE G+IRP  IGGSKP+VAT EVVSKI  YK+E P+IFAWEIRDRL+ EGVC+N 
Sbjct: 62  LAGRYYEMGAIRPGTIGGSKPKVATPEVVSKIELYKQENPTIFAWEIRDRLISEGVCTNS 121

Query: 70  NIPS 73
            +PS
Sbjct: 122 TVPS 125


>gi|3420033|gb|AAC31812.1| transcription factor [Danio rerio]
          Length = 369

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 41  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 100

Query: 70  NIPS 73
           ++PS
Sbjct: 101 SVPS 104


>gi|327283721|ref|XP_003226589.1| PREDICTED: paired box protein Pax-2-like [Anolis carolinensis]
 gi|446397|prf||1911404A PAX-2 gene
          Length = 136

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|348508598|ref|XP_003441841.1| PREDICTED: paired box protein Pax-2-B-like isoform 3 [Oreochromis
           niloticus]
          Length = 349

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|432887621|ref|XP_004074943.1| PREDICTED: paired box protein Pax-8-like [Oryzias latipes]
          Length = 473

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC +D
Sbjct: 72  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDSD 131

Query: 70  NIPS 73
            +PS
Sbjct: 132 TVPS 135


>gi|410975914|ref|XP_003994372.1| PREDICTED: paired box protein Pax-2 isoform 5 [Felis catus]
          Length = 397

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|326668324|ref|XP_001339893.4| PREDICTED: paired box protein Pax-8, partial [Danio rerio]
          Length = 475

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC  D
Sbjct: 87  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDGD 146

Query: 70  NIPS 73
            +PS
Sbjct: 147 TVPS 150


>gi|432923622|ref|XP_004080479.1| PREDICTED: paired box protein Pax-2-B isoform 3 [Oryzias latipes]
          Length = 350

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|348508594|ref|XP_003441839.1| PREDICTED: paired box protein Pax-2-B-like isoform 1 [Oreochromis
           niloticus]
          Length = 387

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|170588517|ref|XP_001899020.1| vab-3 gene. [Brugia malayi]
 gi|158593233|gb|EDP31828.1| vab-3 gene., putative [Brugia malayi]
          Length = 153

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 52/69 (75%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYE+G+IRPRAIGGSKPRVAT  V  KI  YKRE PSIFAWEIRD+LL E VCS D IP
Sbjct: 63  RYYESGTIRPRAIGGSKPRVATVSVCDKIESYKREQPSIFAWEIRDKLLHEKVCSPDTIP 122

Query: 73  SRECPSIFA 81
           S    +I  
Sbjct: 123 SAVVEAIIV 131


>gi|8920362|emb|CAB96396.1| transcription factor [Phallusia mammillata]
          Length = 521

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL E +C  D
Sbjct: 89  ILARYYETGSIRPGVIGGSKPKVATPKVVEKICEYKRQNPTMFAWEIRDRLLGEQICDQD 148

Query: 70  NIPS 73
           N+PS
Sbjct: 149 NVPS 152


>gi|348508596|ref|XP_003441840.1| PREDICTED: paired box protein Pax-2-B-like isoform 2 [Oreochromis
           niloticus]
          Length = 389

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|402881226|ref|XP_003904176.1| PREDICTED: paired box protein Pax-2-like [Papio anubis]
          Length = 256

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|359080047|ref|XP_003587920.1| PREDICTED: paired box protein Pax-2 [Bos taurus]
          Length = 402

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|148880126|sp|O57682.2|PAX2B_XENLA RecName: Full=Paired box protein Pax-2-B; Short=xPax-2b
          Length = 494

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|148224307|ref|NP_001079830.1| paired box protein Pax-2-A [Xenopus laevis]
 gi|2765059|emb|CAA71207.1| paired box protein [Xenopus laevis]
          Length = 427

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|2764528|emb|CAA04222.1| paired box protein [Xenopus laevis]
          Length = 385

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|395828266|ref|XP_003787306.1| PREDICTED: paired box protein Pax-2 isoform 4 [Otolemur garnettii]
          Length = 396

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|34878709|ref|NP_003979.2| paired box protein Pax-2 isoform c [Homo sapiens]
 gi|332834859|ref|XP_003312778.1| PREDICTED: paired box protein Pax-2 [Pan troglodytes]
 gi|438650|gb|AAA36417.1| paired box protein [Homo sapiens]
 gi|119570197|gb|EAW49812.1| paired box gene 2, isoform CRA_d [Homo sapiens]
          Length = 396

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|410955290|ref|XP_003984289.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-8 [Felis
           catus]
          Length = 457

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI  YKR+ P++FAWEIRDRLL EG C ND
Sbjct: 61  ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGXCDND 120

Query: 70  NIPS 73
            +PS
Sbjct: 121 TVPS 124


>gi|18859205|ref|NP_571715.1| paired box gene 2b [Danio rerio]
 gi|3420031|gb|AAC31811.1| transcription factor [Danio rerio]
 gi|190336756|gb|AAI62214.1| Paired box gene 2b [Danio rerio]
          Length = 386

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|198462147|ref|XP_002135676.1| sparkling shaven [Drosophila pseudoobscura pseudoobscura]
 gi|198142524|gb|EDY71260.1| sparkling shaven [Drosophila pseudoobscura pseudoobscura]
          Length = 807

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 235 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQD 294

Query: 70  NIPS 73
           N+PS
Sbjct: 295 NVPS 298


>gi|195064058|ref|XP_001996488.1| GH23966 [Drosophila grimshawi]
 gi|193892034|gb|EDV90900.1| GH23966 [Drosophila grimshawi]
          Length = 862

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 231 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQD 290

Query: 70  NIPS 73
           N+PS
Sbjct: 291 NVPS 294


>gi|118344268|ref|NP_001071959.1| transcription factor protein [Ciona intestinalis]
 gi|70570864|dbj|BAE06635.1| transcription factor protein [Ciona intestinalis]
          Length = 1284

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV +I+ YKRE P++FAWEIRDRLL + VCS +
Sbjct: 507 ILARYYETGSIRPGVIGGSKPKVATHDVVMRITEYKRENPTMFAWEIRDRLLADEVCSQE 566

Query: 70  NIPS 73
            +PS
Sbjct: 567 TVPS 570


>gi|196049288|dbj|BAG68613.1| transcription factor [Cyprinus carpio]
          Length = 157

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 1/94 (1%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC
Sbjct: 21  VSKILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVC 80

Query: 67  SNDNIPS-RECPSIFAWEIRDRLLQEGVCSNDNI 99
            ND++PS      I   +++    Q G  S  N+
Sbjct: 81  DNDSVPSVSSINRIIRTKVQQPPGQSGAVSAHNL 114


>gi|432923473|ref|XP_004080477.1| PREDICTED: paired box protein Pax-2-B isoform 1 [Oryzias latipes]
          Length = 389

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|432923620|ref|XP_004080478.1| PREDICTED: paired box protein Pax-2-B isoform 2 [Oryzias latipes]
          Length = 387

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|402582100|gb|EJW76046.1| hypothetical protein WUBG_13045 [Wuchereria bancrofti]
          Length = 130

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 50/61 (81%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYE+G+IRPRAIGGSKPRVAT  V  KI  YKRE PSIFAWEIRD+LL E VCS D IP
Sbjct: 63  RYYESGTIRPRAIGGSKPRVATVSVCDKIESYKREQPSIFAWEIRDKLLHEKVCSPDTIP 122

Query: 73  S 73
           S
Sbjct: 123 S 123


>gi|283464161|gb|ADB22664.1| paired box protein 2/5/8 [Saccoglossus kowalevskii]
          Length = 184

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC N+
Sbjct: 60  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEAVCDNE 119

Query: 70  NIPS 73
           N+PS
Sbjct: 120 NVPS 123


>gi|195134006|ref|XP_002011429.1| GI14046 [Drosophila mojavensis]
 gi|193912052|gb|EDW10919.1| GI14046 [Drosophila mojavensis]
          Length = 965

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 278 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQD 337

Query: 70  NIPS 73
           N+PS
Sbjct: 338 NVPS 341


>gi|195173607|ref|XP_002027579.1| GL18401 [Drosophila persimilis]
 gi|194114491|gb|EDW36534.1| GL18401 [Drosophila persimilis]
          Length = 871

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 235 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQD 294

Query: 70  NIPS 73
           N+PS
Sbjct: 295 NVPS 298


>gi|2764530|emb|CAA04223.1| paired box protein [Xenopus laevis]
          Length = 329

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|5815455|gb|AAD52680.1|AF179300_1 Pax-2 protein [Xenopus laevis]
          Length = 492

 Score = 97.8 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|33391193|gb|AAQ17211.1| paired and homeobox transcription factor [Tripedalia cystophora]
          Length = 527

 Score = 97.8 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT  VVSKI+ YKR  P++FAWEIRDRLLQ+ VCS +
Sbjct: 63  ILGRYYETGSIKPGIIGGSKPKVATPGVVSKIAEYKRANPTMFAWEIRDRLLQDSVCSQE 122

Query: 70  NIPS 73
           N+PS
Sbjct: 123 NVPS 126


>gi|391341966|ref|XP_003745295.1| PREDICTED: paired box protein Pax-2-B-like [Metaseiulus
           occidentalis]
          Length = 160

 Score = 97.8 bits (242), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV  I++YK++ P++FAWEIRDRLL +GVC  D
Sbjct: 91  ILGRYYETGSIRPGVIGGSKPKVATPKVVDAIANYKKQNPTMFAWEIRDRLLADGVCDQD 150

Query: 70  NIPS 73
           NIPS
Sbjct: 151 NIPS 154


>gi|312073997|ref|XP_003139772.1| vab-3 [Loa loa]
          Length = 126

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 50/61 (81%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYE+G+IRPRAIGGSKPRVAT  V  KI  YKRE PSIFAWEIRD+LL E VCS D IP
Sbjct: 65  RYYESGTIRPRAIGGSKPRVATVSVCDKIESYKREQPSIFAWEIRDKLLHEKVCSPDTIP 124

Query: 73  S 73
           S
Sbjct: 125 S 125


>gi|3420035|gb|AAC31813.1| transcription factor [Danio rerio]
          Length = 429

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC  D
Sbjct: 41  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDGD 100

Query: 70  NIPS 73
            +PS
Sbjct: 101 TVPS 104


>gi|291223999|ref|XP_002731996.1| PREDICTED: paired box protein 2/5/8 [Saccoglossus kowalevskii]
          Length = 619

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC N+
Sbjct: 60  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEAVCDNE 119

Query: 70  NIPS 73
           N+PS
Sbjct: 120 NVPS 123


>gi|47208299|emb|CAF93365.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 356

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 1/91 (1%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 53  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 112

Query: 70  NIPS-RECPSIFAWEIRDRLLQEGVCSNDNI 99
           ++PS      I   +++ +  Q G  S  N+
Sbjct: 113 SVPSVSSINRIIRTKVQQQPGQTGSVSAHNL 143


>gi|345494898|ref|XP_001604502.2| PREDICTED: hypothetical protein LOC100120909 [Nasonia
          vitripennis]
          Length = 536

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/63 (65%), Positives = 51/63 (80%)

Query: 11 VHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDN 70
          + RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+CS DN
Sbjct: 27 IRRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQDN 86

Query: 71 IPS 73
          +PS
Sbjct: 87 VPS 89


>gi|270004886|gb|EFA01334.1| shaven [Tribolium castaneum]
          Length = 472

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 88  ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQD 147

Query: 70  NIPS 73
           N+PS
Sbjct: 148 NVPS 151


>gi|70570870|dbj|BAE06636.1| transcription factor protein [Ciona intestinalis]
          Length = 812

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV +I+ YKRE P++FAWEIRDRLL + VCS +
Sbjct: 69  ILARYYETGSIRPGVIGGSKPKVATHDVVMRITEYKRENPTMFAWEIRDRLLADEVCSQE 128

Query: 70  NIPS 73
            +PS
Sbjct: 129 TVPS 132


>gi|335353917|dbj|BAK39715.1| paired box protein 5 [Tursiops truncatus]
          Length = 243

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 17 ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 76

Query: 70 NIPS 73
           +PS
Sbjct: 77 TVPS 80


>gi|393906365|gb|EFO24300.2| vab-3 [Loa loa]
          Length = 133

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 50/61 (81%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYE+G+IRPRAIGGSKPRVAT  V  KI  YKRE PSIFAWEIRD+LL E VCS D IP
Sbjct: 64  RYYESGTIRPRAIGGSKPRVATVSVCDKIESYKREQPSIFAWEIRDKLLHEKVCSPDTIP 123

Query: 73  S 73
           S
Sbjct: 124 S 124


>gi|189235370|ref|XP_968041.2| PREDICTED: similar to shaven CG11049-PA, partial [Tribolium
           castaneum]
          Length = 442

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 58  ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQD 117

Query: 70  NIPS 73
           N+PS
Sbjct: 118 NVPS 121


>gi|2765061|emb|CAA71208.1| paired box protein [Xenopus laevis]
          Length = 497

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+V T +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVTTPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|410904088|ref|XP_003965525.1| PREDICTED: paired box protein Pax-8-like [Takifugu rubripes]
          Length = 459

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC +D
Sbjct: 60  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSD 119

Query: 70  NIPS 73
            +PS
Sbjct: 120 MVPS 123


>gi|3420029|gb|AAC31810.1| transcription factor [Takifugu rubripes]
          Length = 451

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC +D
Sbjct: 52  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSD 111

Query: 70  NIPS 73
            +PS
Sbjct: 112 MVPS 115


>gi|2394237|gb|AAB70246.1| paired box protein [Paracentrotus lividus]
          Length = 629

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           R+YETGSI+P  IGGSKP+VAT EVV+KI+ YKR+ P+IFAWEIRDRLL E VC  D +P
Sbjct: 122 RFYETGSIKPGVIGGSKPKVATGEVVNKIADYKRDNPTIFAWEIRDRLLSENVCVKDTVP 181

Query: 73  S 73
           S
Sbjct: 182 S 182


>gi|144369326|dbj|BAF56221.1| Pax-C [Anthopleura japonica]
          Length = 462

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP +IGGSKP+VAT  VVSKI  YK++ P+IFAWEIRDRL++EG+C  +
Sbjct: 73  ILGRYYETGSIRPGSIGGSKPKVATPPVVSKILQYKQQNPTIFAWEIRDRLVEEGICDRE 132

Query: 70  NIPS 73
           N PS
Sbjct: 133 NTPS 136


>gi|431909900|gb|ELK13002.1| Paired box protein Pax-5, partial [Pteropus alecto]
          Length = 342

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 54  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 113

Query: 70  NIPS 73
            +PS
Sbjct: 114 TVPS 117


>gi|301612842|ref|XP_002935920.1| PREDICTED: paired box protein Pax-5-like [Xenopus (Silurana)
           tropicalis]
          Length = 389

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|62473211|ref|NP_001014698.1| shaven, isoform G [Drosophila melanogaster]
 gi|61699733|gb|AAX53599.1| shaven, isoform G [Drosophila melanogaster]
          Length = 628

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 227 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 286

Query: 70  NIPS 73
           N+PS
Sbjct: 287 NVPS 290


>gi|45551190|ref|NP_726645.3| shaven, isoform C [Drosophila melanogaster]
 gi|45444828|gb|AAN06579.3| shaven, isoform C [Drosophila melanogaster]
          Length = 647

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 227 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 286

Query: 70  NIPS 73
           N+PS
Sbjct: 287 NVPS 290


>gi|380015462|ref|XP_003691720.1| PREDICTED: uncharacterized protein LOC100864042 [Apis florea]
          Length = 623

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+CS D
Sbjct: 117 ILSRYYETGSFKAGVIGGSKPKVATPPVVEAIANYKRDNPTMFAWEIRDRLLAEGICSQD 176

Query: 70  NIPS 73
           N+PS
Sbjct: 177 NVPS 180


>gi|38885472|gb|AAR27595.1| BSAP splice variant delta789 [Homo sapiens]
 gi|119578698|gb|EAW58294.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_a [Homo sapiens]
          Length = 295

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|395514373|ref|XP_003761392.1| PREDICTED: paired box protein Pax-5 [Sarcophilus harrisii]
          Length = 390

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|334332855|ref|XP_001363552.2| PREDICTED: paired box protein Pax-5-like [Monodelphis domestica]
          Length = 378

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 55  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 114

Query: 70  NIPS 73
            +PS
Sbjct: 115 TVPS 118


>gi|301767072|ref|XP_002918959.1| PREDICTED: paired box protein Pax-5-like [Ailuropoda melanoleuca]
          Length = 395

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 72  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 131

Query: 70  NIPS 73
            +PS
Sbjct: 132 TVPS 135


>gi|113201774|gb|ABI33104.1| PAX5/ZNF521 fusion protein [Homo sapiens]
          Length = 1541

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|449282917|gb|EMC89652.1| Paired box protein Pax-5, partial [Columba livia]
          Length = 246

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 54/67 (80%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC
Sbjct: 51  VSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVC 110

Query: 67  SNDNIPS 73
            ND +PS
Sbjct: 111 DNDTVPS 117


>gi|325980254|gb|ADZ48386.1| Pax5 [Polyodon spathula]
          Length = 194

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 54/67 (80%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC
Sbjct: 37  VSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAERVC 96

Query: 67  SNDNIPS 73
            ND +PS
Sbjct: 97  DNDTVPS 103


>gi|313235562|emb|CBY11017.1| unnamed protein product [Oikopleura dioica]
          Length = 521

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGSIRP  IGGSKP+VAT  VV+KI  YKR  P++FAWEIRDRLL E VCS +
Sbjct: 160 ILARFYETGSIRPGVIGGSKPKVATPHVVNKICEYKRANPTMFAWEIRDRLLSENVCSQE 219

Query: 70  NIPS 73
           N+PS
Sbjct: 220 NVPS 223


>gi|38885459|gb|AAR27594.1| BSAP splice variant delta78 [Homo sapiens]
 gi|119578701|gb|EAW58297.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_d [Homo sapiens]
          Length = 324

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|242006165|ref|XP_002423925.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
 gi|212507188|gb|EEB11187.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
          Length = 509

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/51 (88%), Positives = 47/51 (92%)

Query: 23  RAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIPS 73
           RAIGGSKPRVAT  VVSKI+ YKRECPSIFAWEIRDRLL EGVC+NDNIPS
Sbjct: 129 RAIGGSKPRVATTPVVSKIADYKRECPSIFAWEIRDRLLSEGVCTNDNIPS 179


>gi|62473244|ref|NP_001014701.1| shaven, isoform D [Drosophila melanogaster]
 gi|61699730|gb|AAX53596.1| shaven, isoform D [Drosophila melanogaster]
          Length = 680

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 227 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 286

Query: 70  NIPS 73
           N+PS
Sbjct: 287 NVPS 290


>gi|113201776|gb|ABI33105.1| PAX5/FOXP1 fusion protein [Homo sapiens]
          Length = 877

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|48994568|gb|AAT47991.1| Pax-6 [Nautilus pompilius]
          Length = 98

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 50/54 (92%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|327277237|ref|XP_003223372.1| PREDICTED: paired box protein Pax-5-like [Anolis carolinensis]
          Length = 390

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|45383313|ref|NP_989755.1| paired box protein Pax-5 [Gallus gallus]
 gi|4630779|dbj|BAA76951.1| Pax-5 [Gallus gallus]
          Length = 391

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|224091743|ref|XP_002192863.1| PREDICTED: paired box protein Pax-5 [Taeniopygia guttata]
          Length = 391

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|195564356|ref|XP_002105786.1| GD24421 [Drosophila simulans]
 gi|194201662|gb|EDX15238.1| GD24421 [Drosophila simulans]
          Length = 680

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 227 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 286

Query: 70  NIPS 73
           N+PS
Sbjct: 287 NVPS 290


>gi|148224264|ref|NP_001079237.1| paired box protein Pax-5 [Xenopus laevis]
 gi|82249042|sp|Q9YH95.1|PAX5_XENLA RecName: Full=Paired box protein Pax-5; Short=XPax-5
 gi|4138727|emb|CAA09230.1| paired box protein [Xenopus laevis]
          Length = 388

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|68032725|gb|AAY84829.1| Pax2/5/8a [Oikopleura dioica]
          Length = 519

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGSIRP  IGGSKP+VAT  VV+KI  YKR  P++FAWEIRDRLL E VCS +
Sbjct: 161 ILARFYETGSIRPGVIGGSKPKVATPHVVNKICEYKRANPTMFAWEIRDRLLSENVCSQE 220

Query: 70  NIPS 73
           N+PS
Sbjct: 221 NVPS 224


>gi|63028383|gb|AAY27073.1| Pax2/5/8a [Oikopleura dioica]
          Length = 519

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGSIRP  IGGSKP+VAT  VV+KI  YKR  P++FAWEIRDRLL E VCS +
Sbjct: 161 ILARFYETGSIRPGVIGGSKPKVATPHVVNKICEYKRANPTMFAWEIRDRLLSENVCSQE 220

Query: 70  NIPS 73
           N+PS
Sbjct: 221 NVPS 224


>gi|440890686|gb|ELR44898.1| Paired box protein Pax-5, partial [Bos grunniens mutus]
          Length = 355

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 56  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 115

Query: 70  NIPS 73
            +PS
Sbjct: 116 TVPS 119


>gi|296190311|ref|XP_002743135.1| PREDICTED: paired box protein Pax-5 isoform 2 [Callithrix jacchus]
 gi|38885422|gb|AAR27592.1| BSAP splice variant delta8 [Homo sapiens]
 gi|119578703|gb|EAW58299.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_f [Homo sapiens]
          Length = 357

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|38885409|gb|AAR27591.1| BSAP splice variant delta7 [Homo sapiens]
 gi|119578699|gb|EAW58295.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_b [Homo sapiens]
          Length = 288

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|351696948|gb|EHA99866.1| Paired box protein Pax-5, partial [Heterocephalus glaber]
          Length = 355

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 56  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 115

Query: 70  NIPS 73
            +PS
Sbjct: 116 TVPS 119


>gi|223558217|gb|ACM91604.1| B cell specific activator protein variant A delta 8/9 [Homo
           sapiens]
          Length = 328

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|297467375|ref|XP_618574.5| PREDICTED: paired box protein Pax-5 isoform 1 [Bos taurus]
 gi|297477981|ref|XP_002689763.1| PREDICTED: paired box protein Pax-5 [Bos taurus]
 gi|296484681|tpg|DAA26796.1| TPA: paired box gene 5-like [Bos taurus]
          Length = 392

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|194220480|ref|XP_001495977.2| PREDICTED: paired box protein Pax-8-like [Equus caballus]
          Length = 417

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/60 (71%), Positives = 49/60 (81%)

Query: 14 YYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIPS 73
          YYETGSIRP  IGGSKP+VA  +VV KI  YKR+ P++FAWEIRDRLL EGVC ND +PS
Sbjct: 25 YYETGSIRPGVIGGSKPKVANPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPS 84


>gi|296190313|ref|XP_002743136.1| PREDICTED: paired box protein Pax-5 isoform 3 [Callithrix jacchus]
 gi|38885441|gb|AAR27593.1| BSAP splice variant delta9 [Homo sapiens]
 gi|119578700|gb|EAW58296.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_c [Homo sapiens]
          Length = 362

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|223558225|gb|ACM91608.1| B cell specific activator protein variant A delta 7 insert 6/7
           [Homo sapiens]
          Length = 307

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|340372751|ref|XP_003384907.1| PREDICTED: hypothetical protein LOC100632785 [Amphimedon
           queenslandica]
          Length = 493

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGS++P  IGGSKP+VAT +VV+KI  YKRE PSIFAWEIRDRLL EG+C+  
Sbjct: 59  ILGRFYETGSVKPGIIGGSKPKVATPKVVNKIEDYKRENPSIFAWEIRDRLLTEGICNKV 118

Query: 70  NIPS 73
           N+PS
Sbjct: 119 NVPS 122


>gi|15625550|gb|AAL04157.1|AF411466_1 transcription factor Pax2, partial [Petromyzon marinus]
          Length = 322

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC  D
Sbjct: 2  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAERVCDTD 61

Query: 70 NIPS 73
           +PS
Sbjct: 62 TVPS 65


>gi|345308222|ref|XP_001509316.2| PREDICTED: paired box protein Pax-5-like [Ornithorhynchus anatinus]
          Length = 648

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|348570280|ref|XP_003470925.1| PREDICTED: paired box protein Pax-5-like [Cavia porcellus]
          Length = 390

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|344271620|ref|XP_003407635.1| PREDICTED: paired box protein Pax-5-like [Loxodonta africana]
          Length = 403

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 80  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 139

Query: 70  NIPS 73
            +PS
Sbjct: 140 TVPS 143


>gi|395823849|ref|XP_003785189.1| PREDICTED: paired box protein Pax-5 [Otolemur garnettii]
          Length = 391

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|426220188|ref|XP_004004298.1| PREDICTED: paired box protein Pax-5 [Ovis aries]
          Length = 392

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|350579381|ref|XP_003122067.3| PREDICTED: paired box protein Pax-5 [Sus scrofa]
          Length = 391

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|297684029|ref|XP_002819659.1| PREDICTED: paired box protein Pax-5 isoform 1 [Pongo abelii]
          Length = 391

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|432110746|gb|ELK34223.1| Paired box protein Pax-5, partial [Myotis davidii]
          Length = 210

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 54  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 113

Query: 70  NIPS 73
            +PS
Sbjct: 114 TVPS 117


>gi|6679213|ref|NP_032808.1| paired box protein Pax-5 [Mus musculus]
 gi|400733|sp|Q02650.1|PAX5_MOUSE RecName: Full=Paired box protein Pax-5; AltName:
           Full=B-cell-specific transcription factor; Short=BSAP
 gi|192242|gb|AAA37325.1| transcription factor [Mus musculus]
 gi|148670473|gb|EDL02420.1| paired box gene 5 [Mus musculus]
 gi|162318416|gb|AAI57082.1| Paired box gene 5 [synthetic construct]
 gi|162318892|gb|AAI56135.1| Paired box gene 5 [synthetic construct]
          Length = 391

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|48994411|gb|AAT47938.1| Pax-6 [Sepia pharaonis]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|9951920|ref|NP_057953.1| paired box protein Pax-5 [Homo sapiens]
 gi|114624528|ref|XP_001169207.1| PREDICTED: paired box protein Pax-5 isoform 7 [Pan troglodytes]
 gi|296190309|ref|XP_002743134.1| PREDICTED: paired box protein Pax-5 isoform 1 [Callithrix jacchus]
 gi|397519552|ref|XP_003829922.1| PREDICTED: paired box protein Pax-5 [Pan paniscus]
 gi|403298595|ref|XP_003940099.1| PREDICTED: paired box protein Pax-5 [Saimiri boliviensis
           boliviensis]
 gi|426361773|ref|XP_004048074.1| PREDICTED: paired box protein Pax-5 [Gorilla gorilla gorilla]
 gi|417449|sp|Q02548.1|PAX5_HUMAN RecName: Full=Paired box protein Pax-5; AltName:
           Full=B-cell-specific transcription factor; Short=BSAP
 gi|179556|gb|AAA58397.1| transcription factor [Homo sapiens]
 gi|38885391|gb|AAR27590.1| BSAP [Homo sapiens]
 gi|117606486|gb|ABK41900.1| paired box gene 5 (B-cell lineage specific activator) [Homo
           sapiens]
 gi|119578702|gb|EAW58298.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_e [Homo sapiens]
 gi|162317614|gb|AAI56190.1| Paired box 5 [synthetic construct]
 gi|162318208|gb|AAI56928.1| Paired box 5 [synthetic construct]
 gi|261861668|dbj|BAI47356.1| paired box 5 [synthetic construct]
 gi|355567622|gb|EHH23963.1| B-cell-specific transcription factor [Macaca mulatta]
 gi|355753193|gb|EHH57239.1| B-cell-specific transcription factor [Macaca fascicularis]
          Length = 391

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|332228385|ref|XP_003263371.1| PREDICTED: paired box protein Pax-5 [Nomascus leucogenys]
          Length = 391

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|156377156|ref|XP_001630723.1| predicted protein [Nematostella vectensis]
 gi|156217749|gb|EDO38660.1| predicted protein [Nematostella vectensis]
          Length = 467

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 55/67 (82%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGSIRP +IGGSKP+VAT  VV+KI  YK++ P+IFAWEIRDRL++EG+C
Sbjct: 71  VSKILGRYYETGSIRPGSIGGSKPKVATPPVVNKILQYKQQNPTIFAWEIRDRLVEEGIC 130

Query: 67  SNDNIPS 73
             DN PS
Sbjct: 131 DRDNTPS 137


>gi|325980256|gb|ADZ48387.1| Pax8 [Polyodon spathula]
          Length = 166

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC +D
Sbjct: 32 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSD 91

Query: 70 NIPS 73
            PS
Sbjct: 92 TAPS 95


>gi|18693239|dbj|BAB85112.1| LjPax2/5/8 [Lethenteron camtschaticum]
          Length = 416

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC  D
Sbjct: 67  ILGRYYETGSIRPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAERVCDTD 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|410978702|ref|XP_003995728.1| PREDICTED: paired box protein Pax-5 [Felis catus]
          Length = 423

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 100 ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 159

Query: 70  NIPS 73
            +PS
Sbjct: 160 TVPS 163


>gi|402896957|ref|XP_003911544.1| PREDICTED: paired box protein Pax-5, partial [Papio anubis]
          Length = 322

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|355709389|gb|AES03575.1| paired box 5 [Mustela putorius furo]
          Length = 366

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|345777609|ref|XP_854841.2| PREDICTED: paired box protein Pax-5 [Canis lupus familiaris]
          Length = 391

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|223558221|gb|ACM91606.1| B cell specific activator protein variant A delta 5/9 [Homo
           sapiens]
          Length = 319

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|390979676|ref|NP_001254641.1| paired box protein Pax-5 [Equus caballus]
 gi|389831276|gb|AFL02664.1| PAX5 [Equus caballus]
          Length = 391

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|157824085|ref|NP_001102731.1| paired box protein Pax-5 [Rattus norvegicus]
 gi|149045794|gb|EDL98794.1| similar to transcription factor (predicted) [Rattus norvegicus]
          Length = 391

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|48994399|gb|AAT47932.1| Pax-6 [Sepioteuthis lessoniana]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|45511041|gb|AAS67092.1| Pax-6 [Loligo forbesii]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|45510997|gb|AAS67070.1| Pax-6 [Vampyroteuthis infernalis]
 gi|45511005|gb|AAS67074.1| Pax-6 [Tremoctopus violaceus]
 gi|45511007|gb|AAS67075.1| Pax-6 [Octopus berrima]
 gi|45511009|gb|AAS67076.1| Pax-6 [Octopus kaurna]
 gi|45511011|gb|AAS67077.1| Pax-6 [Octopus rubescens]
 gi|45511013|gb|AAS67078.1| Pax-6 [Hapalochlaena maculosa]
 gi|45511015|gb|AAS67079.1| Pax-6 [Octopus bimaculoides]
 gi|45511017|gb|AAS67080.1| Pax-6 [Benthoctopus sp. A-JMS-2004]
 gi|45511019|gb|AAS67081.1| Pax-6 [Enteroctopus dofleini]
 gi|45511021|gb|AAS67082.1| Pax-6 [Adelieledone polymorpha]
 gi|45511023|gb|AAS67083.1| Pax-6 [Pareledone turqueti]
 gi|45511025|gb|AAS67084.1| Pax-6 [Graneledone verrucosa]
 gi|45511027|gb|AAS67085.1| Pax-6 [Vitreledonella richardi]
 gi|45511029|gb|AAS67086.1| Pax-6 [Japetella diaphana]
 gi|45511031|gb|AAS67087.1| Pax-6 [Bolitaena pygmaea]
 gi|45511035|gb|AAS67089.1| Pax-6 [Sepiola sp. JMS-2004]
 gi|45511037|gb|AAS67090.1| Pax-6 [Spirula spirula]
 gi|45511039|gb|AAS67091.1| Pax-6 [Sepia officinalis]
 gi|45511043|gb|AAS67093.1| Pax-6 [Sthenoteuthis oualaniensis]
 gi|48994387|gb|AAT47926.1| Pax-6 [Bathyteuthis berryi]
 gi|48994389|gb|AAT47927.1| Pax-6 [Pterygioteuthis microlampas]
 gi|48994391|gb|AAT47928.1| Pax-6 [Joubiniteuthis sp. JMS-2004]
 gi|48994393|gb|AAT47929.1| Pax-6 [Ommastrephes bartramii]
 gi|48994397|gb|AAT47931.1| Pax-6 [Sepioteuthis australis]
 gi|48994403|gb|AAT47934.1| Pax-6 [Loliolus sp. JMS-2004]
 gi|48994405|gb|AAT47935.1| Pax-6 [Rossia pacifica]
 gi|48994407|gb|AAT47936.1| Pax-6 [Heteroteuthis hawaiiensis]
 gi|48994409|gb|AAT47937.1| Pax-6 [Euprymna scolopes]
 gi|48994413|gb|AAT47939.1| Pax-6 [Metasepia tullbergi]
 gi|48994415|gb|AAT47940.1| Pax-6 [Callistoctopus ornatus]
 gi|48994524|gb|AAT47969.1| Pax-6 [Bathypolypus valdiviae]
 gi|48994526|gb|AAT47970.1| Pax-6 [Bathypolypus sp. JMS-2004]
 gi|48994530|gb|AAT47972.1| Pax-6 [Eledone cirrhosa]
 gi|48994534|gb|AAT47974.1| Pax-6 [Sepioloidea lineolata]
 gi|48994538|gb|AAT47976.1| Pax-6 [Sepia apama]
 gi|48994540|gb|AAT47977.1| Pax-6 [Sepiella japonica]
 gi|48994542|gb|AAT47978.1| Pax-6 [Euprymna tasmanica]
 gi|48994544|gb|AAT47979.1| Pax-6 [Rossia macrosoma]
 gi|48994546|gb|AAT47980.1| Pax-6 [Histioteuthis oceanica]
 gi|48994548|gb|AAT47981.1| Pax-6 [Abraliopsis pacificus]
 gi|48994550|gb|AAT47982.1| Pax-6 [Enoploteuthis higginsi]
 gi|48994554|gb|AAT47984.1| Pax-6 [Bathyteuthis abyssicola]
 gi|48994556|gb|AAT47985.1| Pax-6 [Galiteuthis sp. JMS-2004]
 gi|48994558|gb|AAT47986.1| Pax-6 [Megalocranchia fisheri]
 gi|48994562|gb|AAT47988.1| Pax-6 [Cranchia scabra]
 gi|48994564|gb|AAT47989.1| Pax-6 [Illex coindetii]
 gi|48994566|gb|AAT47990.1| Pax-6 [Todaropsis eblanae]
 gi|320128847|gb|ADW19669.1| PAX-6 protein [Abdopus aculeatus]
 gi|320128849|gb|ADW19670.1| PAX-6 protein [Ameloctopus litoralis]
 gi|320128851|gb|ADW19671.1| PAX-6 protein [Amphioctopus aegina]
 gi|320128853|gb|ADW19672.1| PAX-6 protein [Aphrodoctopus schultzei]
 gi|320128855|gb|ADW19673.1| PAX-6 protein [Bathypolypus sponsalis]
 gi|320128857|gb|ADW19674.1| PAX-6 protein [Benthoctopus normani]
 gi|320128859|gb|ADW19675.1| PAX-6 protein [Cistopus indicus]
 gi|320128863|gb|ADW19677.1| PAX-6 protein [Praealtus paralbida]
 gi|320128865|gb|ADW19678.1| PAX-6 protein [Octopus vulgaris]
 gi|320128867|gb|ADW19679.1| PAX-6 protein [Vulcanoctopus hydrothermalis]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|281339806|gb|EFB15390.1| hypothetical protein PANDA_007504 [Ailuropoda melanoleuca]
          Length = 366

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 56  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 115

Query: 70  NIPS 73
            +PS
Sbjct: 116 TVPS 119


>gi|444729450|gb|ELW69866.1| Paired box protein Pax-5 [Tupaia chinensis]
          Length = 389

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND +P
Sbjct: 133 RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 192

Query: 73  S 73
           S
Sbjct: 193 S 193


>gi|48994522|gb|AAT47968.1| Pax-6 [Haliphron atlanticus]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|56785872|gb|AAW29068.1| homeodomain transcription factor PaxC [Nematostella vectensis]
          Length = 458

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP +IGGSKP+VAT  VV+KI  YK++ P+IFAWEIRDRL++EG+C  D
Sbjct: 65  ILGRYYETGSIRPGSIGGSKPKVATPPVVNKILQYKQQNPTIFAWEIRDRLVEEGICDRD 124

Query: 70  NIPS 73
           N PS
Sbjct: 125 NTPS 128


>gi|48994528|gb|AAT47971.1| Pax-6 [Benthoctopus sp. JMS-2004]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|32816237|gb|AAP88434.1| PaxB homeobox protein [Nematostella vectensis]
          Length = 298

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 55/68 (80%), Gaps = 4/68 (5%)

Query: 6   LLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGV 65
           +LC    R+YETGSI+P  IGGSKP+VAT  VV+KI+ YK   P++FAWEIRDRLL EGV
Sbjct: 51  ILC----RFYETGSIKPGVIGGSKPKVATGNVVTKIAEYKLANPTMFAWEIRDRLLSEGV 106

Query: 66  CSNDNIPS 73
           C++DN+PS
Sbjct: 107 CTSDNVPS 114


>gi|320128861|gb|ADW19676.1| PAX-6 protein [Grimpella thaumastocheir]
          Length = 61

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 8  ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 61


>gi|156401143|ref|XP_001639151.1| predicted protein [Nematostella vectensis]
 gi|156226277|gb|EDO47088.1| predicted protein [Nematostella vectensis]
          Length = 525

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/61 (68%), Positives = 52/61 (85%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           R+YETGSI+P  IGGSKP+VAT  VV+KI+ YK   P++FAWEIRDRLL EGVC++DN+P
Sbjct: 62  RFYETGSIKPGVIGGSKPKVATGNVVTKIAEYKLANPTMFAWEIRDRLLSEGVCTSDNVP 121

Query: 73  S 73
           S
Sbjct: 122 S 122


>gi|56785870|gb|AAW29067.1| homeodomain transcription factor PaxB [Nematostella vectensis]
          Length = 525

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/61 (68%), Positives = 52/61 (85%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           R+YETGSI+P  IGGSKP+VAT  VV+KI+ YK   P++FAWEIRDRLL EGVC++DN+P
Sbjct: 62  RFYETGSIKPGVIGGSKPKVATGNVVTKIAEYKLANPTMFAWEIRDRLLSEGVCTSDNVP 121

Query: 73  S 73
           S
Sbjct: 122 S 122


>gi|48994536|gb|AAT47975.1| Pax-6 [Sepiadarium austrinum]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|48994395|gb|AAT47930.1| Pax-6 [Lolliguncula brevis]
 gi|48994552|gb|AAT47983.1| Pax-6 [Octopoteuthis nielseni]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|48994401|gb|AAT47933.1| Pax-6 [Photololigo sp. JMS-2004]
 gi|48994560|gb|AAT47987.1| Pax-6 [Teuthowenia megalops]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSE 98


>gi|405971400|gb|EKC36239.1| Paired box protein Pax-2-A [Crassostrea gigas]
          Length = 562

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV  I+ YK E P++FAWEIRDRLL EGVC+ +
Sbjct: 95  ILGRYYETGSIKPGVIGGSKPKVATPKVVDAITRYKHENPTMFAWEIRDRLLAEGVCTAE 154

Query: 70  NIPS 73
           N+PS
Sbjct: 155 NVPS 158


>gi|108512958|gb|ABF93171.1| transcription factor Pax-C [Bellonella rigida]
          Length = 67

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSIRP +IGGSKP+VAT  VVSKI  YK++ P+IFAWEIRDRL++EG+C  +
Sbjct: 1  ILGRYYETGSIRPGSIGGSKPKVATPPVVSKILQYKQQNPTIFAWEIRDRLVEEGICDRE 60

Query: 70 NIPS 73
          N PS
Sbjct: 61 NTPS 64


>gi|167859583|gb|ACA04746.1| PaxB [Amphimedon queenslandica]
          Length = 552

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGS++P  IGGSKP+VAT +VV+KI  YKRE PSIFAWEIRDRLL EG+C+  
Sbjct: 59  ILGRFYETGSVKPGIIGGSKPKVATPKVVNKIEDYKRENPSIFAWEIRDRLLTEGICNKV 118

Query: 70  NIPS 73
           N+PS
Sbjct: 119 NVPS 122


>gi|344236082|gb|EGV92185.1| Paired box protein Pax-5 [Cricetulus griseus]
          Length = 386

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 55/73 (75%)

Query: 1   LKFLTLLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRL 60
           L   TL+    + YYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRL
Sbjct: 94  LAVCTLVFSCGYTYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRL 153

Query: 61  LQEGVCSNDNIPS 73
           L E VC ND +PS
Sbjct: 154 LAERVCDNDTVPS 166


>gi|2764534|emb|CAA04225.1| paired box protein [Xenopus laevis]
          Length = 252

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL  G+C ND
Sbjct: 67  VLGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAVGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|18158729|pdb|1K78|A Chain A, Pax5(1-149)+ets-1(331-440)+dna
 gi|18158733|pdb|1K78|E Chain E, Pax5(1-149)+ets-1(331-440)+dna
 gi|18158737|pdb|1K78|I Chain I, Pax5(1-149)+ets-1(331-440)+dna
 gi|27573880|pdb|1MDM|A Chain A, Inhibited Fragment Of Ets-1 And Paired Domain Of Pax5
           Bound To Dna
          Length = 149

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|223558219|gb|ACM91605.1| B cell specific activator protein variant A delta 5 [Homo sapiens]
          Length = 348

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|62473220|ref|NP_001014699.1| shaven, isoform F [Drosophila melanogaster]
 gi|61699732|gb|AAX53598.1| shaven, isoform F [Drosophila melanogaster]
          Length = 792

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 227 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 286

Query: 70  NIPS 73
           N+PS
Sbjct: 287 NVPS 290


>gi|27528344|emb|CAD43608.1| paired box protein [Platynereis dumerilii]
          Length = 230

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP  IGGSKP+VAT +VV  I  YKRE P++FAWEIRDRLL EGVC  +
Sbjct: 52  ILGRYYETGSVRPGVIGGSKPKVATPKVVGAICKYKRENPTMFAWEIRDRLLAEGVCDQE 111

Query: 70  NIPS 73
           N+PS
Sbjct: 112 NVPS 115


>gi|45549241|ref|NP_524633.3| shaven, isoform A [Drosophila melanogaster]
 gi|2624959|gb|AAB86598.1| sparkling protein [Drosophila melanogaster]
 gi|45444827|gb|AAF59385.3| shaven, isoform A [Drosophila melanogaster]
          Length = 844

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 227 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 286

Query: 70  NIPS 73
           N+PS
Sbjct: 287 NVPS 290


>gi|62473199|ref|NP_001014697.1| shaven, isoform H [Drosophila melanogaster]
 gi|61699731|gb|AAX53597.1| shaven, isoform H [Drosophila melanogaster]
          Length = 842

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 227 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 286

Query: 70  NIPS 73
           N+PS
Sbjct: 287 NVPS 290


>gi|113045355|gb|ABI30005.1| B-cell lineage specific activator/TEL oncogene fusion protein [Homo
           sapiens]
          Length = 556

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127

Query: 70  NIPS 73
            +PS
Sbjct: 128 TVPS 131


>gi|139001547|dbj|BAF51689.1| Pax6 [Dicyema acuticephalum]
 gi|139001549|dbj|BAF51690.1| Pax6 [Dicyema acuticephalum]
          Length = 408

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/61 (68%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETG   PR IGGSKPRVAT  V+  I+ YKRECPSIFAWEIRDRLL   VC+ +N+P
Sbjct: 61  RYNETGCFEPRTIGGSKPRVATNHVIQYIAQYKRECPSIFAWEIRDRLLNNAVCTQENVP 120

Query: 73  S 73
           S
Sbjct: 121 S 121


>gi|288176|emb|CAA39302.1| pax2 [Mus musculus]
          Length = 415

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIR +LL+EG+C ND
Sbjct: 67  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRAQLLREGICDND 126

Query: 70  NIPS 73
            +PS
Sbjct: 127 TVPS 130


>gi|350417103|ref|XP_003491258.1| PREDICTED: hypothetical protein LOC100744373 [Bombus impatiens]
          Length = 557

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+CS D
Sbjct: 86  ILSRYYETGSFKAGVIGGSKPKVATPPVVEAIANYKRDNPTMFAWEIRDRLLAEGICSQD 145

Query: 70  NIPS 73
           N+PS
Sbjct: 146 NVPS 149


>gi|345487147|ref|XP_001599246.2| PREDICTED: hypothetical protein LOC100114080 [Nasonia vitripennis]
          Length = 988

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 3/78 (3%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV SKI  YKR+ PSIF+WE+RDRL++EG+C   
Sbjct: 528 ILNRYQETGSIRPGVIGGSKPRVATPEVESKIESYKRDNPSIFSWEVRDRLIKEGICDRT 587

Query: 70  NIPSRECPSIFAWEIRDR 87
             PS    S  +  IRDR
Sbjct: 588 TAPS---VSAISRLIRDR 602


>gi|281359598|ref|NP_001162834.1| shaven, isoform I [Drosophila melanogaster]
 gi|272482453|gb|ACZ95103.1| shaven, isoform I [Drosophila melanogaster]
          Length = 491

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 71  ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 130

Query: 70  NIPS 73
           N+PS
Sbjct: 131 NVPS 134


>gi|354485351|ref|XP_003504847.1| PREDICTED: paired box protein Pax-5-like, partial [Cricetulus
           griseus]
          Length = 370

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 47  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 106

Query: 70  NIPS 73
            +PS
Sbjct: 107 TVPS 110


>gi|194913410|ref|XP_001982689.1| GG16406 [Drosophila erecta]
 gi|190647905|gb|EDV45208.1| GG16406 [Drosophila erecta]
          Length = 842

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 226 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 285

Query: 70  NIPS 73
           N+PS
Sbjct: 286 NVPS 289


>gi|195469427|ref|XP_002099639.1| GE14566 [Drosophila yakuba]
 gi|194185740|gb|EDW99351.1| GE14566 [Drosophila yakuba]
          Length = 847

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 229 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 288

Query: 70  NIPS 73
           N+PS
Sbjct: 289 NVPS 292


>gi|340713172|ref|XP_003395121.1| PREDICTED: hypothetical protein LOC100647018 [Bombus terrestris]
          Length = 558

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+CS D
Sbjct: 86  ILSRYYETGSFKAGVIGGSKPKVATPPVVEAIANYKRDNPTMFAWEIRDRLLAEGICSQD 145

Query: 70  NIPS 73
           N+PS
Sbjct: 146 NVPS 149


>gi|3551867|gb|AAC35286.1| B-cell specific transcription factor BSAP [Homo sapiens]
          Length = 136

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGSI+P  IGGSKP+VAT +VV K + YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 7  ILGRYYETGSIKPGVIGGSKPKVATPKVVEKFAEYKRQNPTMFAWEIRDRLLAERVCDND 66

Query: 70 NIPS 73
           +PS
Sbjct: 67 TVPS 70


>gi|2394243|gb|AAB70249.1| paired box protein [Drosophila melanogaster]
          Length = 472

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 52  ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQD 111

Query: 70  NIPS 73
           N+PS
Sbjct: 112 NVPS 115


>gi|47223577|emb|CAF99186.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 384

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC +D
Sbjct: 51  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSD 110

Query: 70  NIPS 73
            +PS
Sbjct: 111 MVPS 114


>gi|339236597|ref|XP_003379853.1| putative paired box protein Pax-2 [Trichinella spiralis]
 gi|316977437|gb|EFV60539.1| putative paired box protein Pax-2 [Trichinella spiralis]
          Length = 483

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/64 (60%), Positives = 55/64 (85%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGSI+P  IGGSKP+VAT +VV  I++YK++ P++FAWEIRDRLL +G+C +D
Sbjct: 84  ILGRFYETGSIKPGVIGGSKPKVATNKVVGAIANYKKQNPTMFAWEIRDRLLADGICDHD 143

Query: 70  NIPS 73
           N+PS
Sbjct: 144 NVPS 147


>gi|7191040|gb|AAC15713.2| transcription factor Pax-A [Acropora millepora]
          Length = 615

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP AIGGSKP+VAT  VVSKI  YK + P IFAWEIR+ LL +GVC   
Sbjct: 58  ILGRYYETGSVRPGAIGGSKPKVATPRVVSKILAYKEDNPCIFAWEIRNNLLSDGVCDKS 117

Query: 70  NIPS 73
           N+PS
Sbjct: 118 NVPS 121


>gi|45511033|gb|AAS67088.1| Pax-6 [Idiosepius notoides]
          Length = 98

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 49/54 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQE 63
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAW+IRDRLL E
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWKIRDRLLSE 98


>gi|259013376|ref|NP_001158393.1| pox-neuro [Saccoglossus kowalevskii]
 gi|90659987|gb|ABD97270.1| pox-neuro [Saccoglossus kowalevskii]
          Length = 403

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/64 (70%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT  VV KI  YK+E PSIFAWEIRD+LLQE VC  +
Sbjct: 57  ILTRYYETGSIRPGNIGGSKPKVATPLVVKKILQYKQENPSIFAWEIRDKLLQERVCDEN 116

Query: 70  NIPS 73
            IPS
Sbjct: 117 TIPS 120


>gi|307175636|gb|EFN65545.1| Paired box protein Pax-2-B [Camponotus floridanus]
          Length = 190

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+CS D
Sbjct: 84  ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQD 143

Query: 70  NIPS 73
           N+PS
Sbjct: 144 NVPS 147


>gi|161611128|gb|ABX75238.1| Pax-6 [Velodona togata]
          Length = 92

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/52 (84%), Positives = 48/52 (92%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLL 61
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL
Sbjct: 40 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLL 91


>gi|3219278|dbj|BAA28833.1| HrPax-258 [Halocynthia roretzi]
          Length = 432

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT  VV KI  YKR+ P++FAWEIRDRLL E +C  +
Sbjct: 89  ILARYYETGSIKPGVIGGSKPKVATPRVVEKICEYKRQNPTMFAWEIRDRLLVECICDTE 148

Query: 70  NIPS 73
           N+PS
Sbjct: 149 NVPS 152


>gi|161611100|gb|ABX75224.1| Pax-6 [Adelieledone polymorpha]
 gi|161611102|gb|ABX75225.1| Pax-6 [Adelieledone piatkowski]
 gi|161611104|gb|ABX75226.1| Pax-6 [Pareledone aurata]
 gi|161611108|gb|ABX75228.1| Pax-6 [Pareledone aequipapillae]
 gi|161611110|gb|ABX75229.1| Pax-6 [Pareledone albimaculata]
 gi|161611114|gb|ABX75231.1| Pax-6 [Pareledone serperastrata]
 gi|161611116|gb|ABX75232.1| Pax-6 [Pareledone panchroma]
 gi|161611120|gb|ABX75234.1| Pax-6 [Pareledone turqueti]
 gi|161611122|gb|ABX75235.1| Pax-6 [Thaumeledone brevis]
 gi|161611124|gb|ABX75236.1| Pax-6 [Thaumeledone gunteri]
 gi|161611126|gb|ABX75237.1| Pax-6 [Thaumeledone peninsulae]
 gi|161611130|gb|ABX75239.1| Pax-6 [Megaleledone setebos]
 gi|161611134|gb|ABX75241.1| Pax-6 [Graneledone verrucosa]
 gi|161611136|gb|ABX75242.1| Pax-6 [Graneledone antarctica]
          Length = 97

 Score = 94.4 bits (233), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/52 (84%), Positives = 48/52 (92%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLL 61
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLL 96


>gi|242024453|ref|XP_002432642.1| Paired box protein Pax-1, putative [Pediculus humanus corporis]
 gi|212518112|gb|EEB19904.1| Paired box protein Pax-1, putative [Pediculus humanus corporis]
          Length = 102

 Score = 94.4 bits (233), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 33 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQD 92

Query: 70 NIPS 73
          N+PS
Sbjct: 93 NVPS 96


>gi|254733070|gb|ACT79980.1| shaven [Nasonia vitripennis]
          Length = 233

 Score = 94.4 bits (233), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%)

Query: 6  LLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGV 65
          L+   + RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+
Sbjct: 22 LMSVEIRRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGI 81

Query: 66 CSNDNIPS 73
          CS DN+PS
Sbjct: 82 CSQDNVPS 89


>gi|322791121|gb|EFZ15683.1| hypothetical protein SINV_00870 [Solenopsis invicta]
          Length = 173

 Score = 94.0 bits (232), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+CS D
Sbjct: 84  ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQD 143

Query: 70  NIPS 73
           N+PS
Sbjct: 144 NVPS 147


>gi|307197090|gb|EFN78458.1| Segmentation protein paired [Harpegnathos saltator]
          Length = 481

 Score = 94.0 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          +++RY ETGSIRP  IGGSKPRVAT EV +KI  YKRE PS+F+WEIRDRL++EG+C   
Sbjct: 25 ILNRYQETGSIRPGVIGGSKPRVATPEVEAKIEEYKRENPSVFSWEIRDRLVKEGICEKA 84

Query: 70 NIPS 73
          N PS
Sbjct: 85 NAPS 88


>gi|256077794|ref|XP_002575185.1| paired box protein pax-6 [Schistosoma mansoni]
          Length = 691

 Score = 94.0 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VATA VV  I  YK + P++FAWEIRDRLL++ +C+ +
Sbjct: 297 ILGRYYETGSIRPGVIGGSKPKVATASVVEAICKYKEDNPTMFAWEIRDRLLKDQICTVE 356

Query: 70  NIPS 73
           N+PS
Sbjct: 357 NVPS 360


>gi|7335704|gb|AAC15711.2| PaxC transcription factor [Acropora millepora]
          Length = 464

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 54/64 (84%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGSIRP +IGGSKP+VAT  VV+KI  YK++ P+IFAWEIRDRL++EGVC  +
Sbjct: 63  ILGRFYETGSIRPGSIGGSKPKVATPPVVNKIVQYKQQNPTIFAWEIRDRLVEEGVCDRE 122

Query: 70  NIPS 73
           N PS
Sbjct: 123 NTPS 126


>gi|357619664|gb|EHJ72146.1| hypothetical protein KGM_12316 [Danaus plexippus]
          Length = 144

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I+ YKRE P++FAWEIRDRLL EG+CS D
Sbjct: 75  ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIAAYKRENPTMFAWEIRDRLLSEGICSQD 134

Query: 70  NIPS 73
           N+PS
Sbjct: 135 NVPS 138


>gi|194770468|ref|XP_001967315.1| GF20618 [Drosophila ananassae]
 gi|190617040|gb|EDV32564.1| GF20618 [Drosophila ananassae]
          Length = 554

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKRE P++FAWEIRDRLL E +C+ D
Sbjct: 211 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAETICTQD 270

Query: 70  NIPS 73
           N+PS
Sbjct: 271 NVPS 274


>gi|395398418|gb|AFN57632.1| Pax5 variant 1, partial [Mus musculus]
          Length = 248

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  I GSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 39  ILGRYYETGSIKPGVIEGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 98

Query: 70  NIPS 73
            +PS
Sbjct: 99  TVPS 102


>gi|195355690|ref|XP_002044323.1| GM13025 [Drosophila sechellia]
 gi|194130610|gb|EDW52653.1| GM13025 [Drosophila sechellia]
          Length = 839

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT+ V   I++YKRE P++FAWEIRDRLL E +CS D
Sbjct: 227 ILSRYYETGSFKAGVIGGSKPKVATSPVEYAIANYKRENPTMFAWEIRDRLLAEAICSQD 286

Query: 70  NIPS 73
           N+PS
Sbjct: 287 NVPS 290


>gi|360043629|emb|CCD81175.1| putative paired box protein pax-6 [Schistosoma mansoni]
          Length = 883

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VATA VV  I  YK + P++FAWEIRDRLL++ +C+ +
Sbjct: 297 ILGRYYETGSIRPGVIGGSKPKVATASVVEAICKYKEDNPTMFAWEIRDRLLKDQICTVE 356

Query: 70  NIPS 73
           N+PS
Sbjct: 357 NVPS 360


>gi|254733060|gb|ACT79975.1| paired [Nasonia vitripennis]
          Length = 213

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 3/81 (3%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  +++RY ETGSIRP  IGGSKPRVAT EV SKI  YKR+ PSIF+WE+RDRL++EG+C
Sbjct: 49  VSKILNRYQETGSIRPGVIGGSKPRVATPEVESKIESYKRDNPSIFSWEVRDRLIKEGIC 108

Query: 67  SNDNIPSRECPSIFAWEIRDR 87
                PS    S  +  IRDR
Sbjct: 109 DRTTAPS---VSAISRLIRDR 126


>gi|156380514|ref|XP_001631813.1| predicted protein [Nematostella vectensis]
 gi|156218860|gb|EDO39750.1| predicted protein [Nematostella vectensis]
          Length = 604

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP AIGGSKP+VAT +VVSKI  YK + P IFAWEIR+ LL +GVC   
Sbjct: 57  ILGRYYETGSVRPGAIGGSKPKVATPKVVSKILEYKDKNPCIFAWEIRNNLLADGVCDKT 116

Query: 70  NIPS 73
           N+PS
Sbjct: 117 NVPS 120


>gi|56785868|gb|AAW29066.1| homeodomain transcription factor PaxA [Nematostella vectensis]
          Length = 604

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP AIGGSKP+VAT +VVSKI  YK + P IFAWEIR+ LL +GVC   
Sbjct: 57  ILGRYYETGSVRPGAIGGSKPKVATPKVVSKILEYKDKNPCIFAWEIRNNLLADGVCDKT 116

Query: 70  NIPS 73
           N+PS
Sbjct: 117 NVPS 120


>gi|332019878|gb|EGI60339.1| Paired box protein Pax-2-B [Acromyrmex echinatior]
          Length = 283

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 53/67 (79%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+C
Sbjct: 81  VSKILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGIC 140

Query: 67  SNDNIPS 73
           S DN+PS
Sbjct: 141 SQDNVPS 147


>gi|307199871|gb|EFN80268.1| Paired box protein Pax-2-B [Harpegnathos saltator]
          Length = 94

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 52/64 (81%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+CS D
Sbjct: 25 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQD 84

Query: 70 NIPS 73
          N+PS
Sbjct: 85 NVPS 88


>gi|1004367|gb|AAA77685.1| NvPax-6, partial [Notophthalmus viridescens]
          Length = 51

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/50 (88%), Positives = 47/50 (94%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDR 59
          ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDR
Sbjct: 2  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDR 51


>gi|2102726|gb|AAB58290.1| Pax-A [Hydra littoralis]
          Length = 640

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP AIGGSKP+VAT +VV +I   K E P +FAWEIR+ LL EG+C N 
Sbjct: 64  ILGRYYETGSVRPGAIGGSKPKVATPKVVCRIVKLKEENPCMFAWEIRNSLLAEGICDNG 123

Query: 70  NIPS 73
           N+PS
Sbjct: 124 NVPS 127


>gi|89242118|dbj|BAA36344.2| pox neuro [Hydra vulgaris]
          Length = 640

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP AIGGSKP+VAT +VV +I   K E P +FAWEIR+ LL EG+C N 
Sbjct: 64  ILGRYYETGSVRPGAIGGSKPKVATPKVVCRIVKLKEENPCMFAWEIRNSLLAEGICDNG 123

Query: 70  NIPS 73
           N+PS
Sbjct: 124 NVPS 127


>gi|328777587|ref|XP_001122481.2| PREDICTED: paired box protein Pax-2a-like [Apis mellifera]
          Length = 131

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I++YKR+ P++FAWEIRDRLL EG+CS D
Sbjct: 62  ILSRYYETGSFKAGVIGGSKPKVATPPVVEAIANYKRDNPTMFAWEIRDRLLAEGICSQD 121

Query: 70  NIPS 73
           N+PS
Sbjct: 122 NVPS 125


>gi|221128697|ref|XP_002155904.1| PREDICTED: uncharacterized protein LOC100192230 isoform 1 [Hydra
           magnipapillata]
 gi|449679734|ref|XP_004209408.1| PREDICTED: uncharacterized protein LOC100192230 isoform 2 [Hydra
           magnipapillata]
          Length = 640

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP AIGGSKP+VAT +VV +I   K E P +FAWEIR+ LL EG+C N 
Sbjct: 64  ILGRYYETGSVRPGAIGGSKPKVATPKVVCRIVKLKEENPCMFAWEIRNSLLAEGICDNG 123

Query: 70  NIPS 73
           N+PS
Sbjct: 124 NVPS 127


>gi|198423301|ref|XP_002122162.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 625

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/61 (65%), Positives = 51/61 (83%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSI+P AIGGSKP+VATA+V +KI  YK+E P IF+WEIR+RL++EG+C   N+P
Sbjct: 71  RYQETGSIKPGAIGGSKPKVATADVDNKIEEYKKENPGIFSWEIRERLIKEGICDRSNVP 130

Query: 73  S 73
           S
Sbjct: 131 S 131


>gi|358339151|dbj|GAA47267.1| paired box protein Pax-8 [Clonorchis sinensis]
          Length = 1033

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT  VV  I  YK + P++FAWEIRDRLL++ VC+ D
Sbjct: 296 ILGRYYETGSIRPGVIGGSKPKVATPSVVDAICKYKEDSPTMFAWEIRDRLLKDHVCTPD 355

Query: 70  NIPS 73
           N+PS
Sbjct: 356 NVPS 359


>gi|170040723|ref|XP_001848139.1| paired box protein Pax-6 [Culex quinquefasciatus]
 gi|167864322|gb|EDS27705.1| paired box protein Pax-6 [Culex quinquefasciatus]
          Length = 559

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/56 (73%), Positives = 49/56 (87%)

Query: 18  GSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIPS 73
           GSIRPRAIGGSKPRVAT EVV +IS +K+ CP+IFAWEIRD+LL E +C+ +NIPS
Sbjct: 116 GSIRPRAIGGSKPRVATPEVVHRISQFKQNCPNIFAWEIRDKLLNERICTPENIPS 171


>gi|144369323|dbj|BAF56220.1| Pax-B [Anthopleura japonica]
          Length = 539

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/61 (68%), Positives = 50/61 (81%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           R+YETGSI+P  IGGSKP+VAT  VV+KI+ YK   P++FAWEIRDRLL E VCS DN+P
Sbjct: 62  RFYETGSIKPGVIGGSKPKVATPGVVNKIAEYKMSNPTMFAWEIRDRLLSENVCSPDNVP 121

Query: 73  S 73
           S
Sbjct: 122 S 122


>gi|283365203|dbj|BAI66184.1| transcription factor Pax-A [Cladonema radiatum]
          Length = 671

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP AIGGSKP+VAT +VV +I   K E P +FAWEIR+ LL EG+C N 
Sbjct: 78  ILGRYYETGSVRPGAIGGSKPKVATPKVVCRIVKLKEENPCMFAWEIRNSLLAEGICDNG 137

Query: 70  NIPS 73
           N+PS
Sbjct: 138 NVPS 141


>gi|18138030|emb|CAC80517.1| paired box protein [Mus musculus]
          Length = 118

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/49 (87%), Positives = 46/49 (93%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRD 58
           ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRD
Sbjct: 70  ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRD 118


>gi|390355345|ref|XP_785245.3| PREDICTED: uncharacterized protein LOC580076 [Strongylocentrotus
           purpuratus]
          Length = 467

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI P  IGGSKP+VAT  VV KI  YKR+ PSIFAWEIRDRLL+E VC  +
Sbjct: 57  ILSRYYETGSIAPGNIGGSKPKVATPLVVKKIMSYKRKNPSIFAWEIRDRLLRERVCDKN 116

Query: 70  NIPS 73
            IPS
Sbjct: 117 TIPS 120


>gi|47551159|ref|NP_999759.1| paired box protein [Strongylocentrotus purpuratus]
 gi|2394239|gb|AAB70247.1| paired box protein [Strongylocentrotus purpuratus]
          Length = 601

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/61 (65%), Positives = 50/61 (81%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           R+YETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P+IFAWEIRDRLL E +C  + +P
Sbjct: 108 RFYETGSIKPGVIGGSKPKVATRDVVDKIADYKRDNPTIFAWEIRDRLLSESICGKETVP 167

Query: 73  S 73
           S
Sbjct: 168 S 168


>gi|380706566|gb|AFD97529.1| Hau-Pax2/5/8 [Helobdella sp. MS-2000]
          Length = 547

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV  I  YKRE  ++FAWEIRDRLL EGVC  +
Sbjct: 103 ILGRYYETGSIKPGVIGGSKPKVATPKVVDAICKYKRENATMFAWEIRDRLLAEGVCDQE 162

Query: 70  NIPS 73
           N+PS
Sbjct: 163 NVPS 166


>gi|443686446|gb|ELT89724.1| hypothetical protein CAPTEDRAFT_119889, partial [Capitella teleta]
          Length = 134

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV  I  YKRE P++FAWEIRDRLL E VC  +
Sbjct: 52  ILGRYYETGSIKPGVIGGSKPKVATPKVVEAICKYKRENPTMFAWEIRDRLLSEAVCDQE 111

Query: 70  NIPS 73
           N+PS
Sbjct: 112 NVPS 115


>gi|117606393|ref|NP_001071090.1| paired [Tribolium castaneum]
 gi|115498171|gb|ABD63009.2| paired [Tribolium castaneum]
          Length = 414

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I  YKRE PSIF+WEIRDRL++EG+C   
Sbjct: 90  ILNRYQETGSIRPGVIGGSKPRVATPEVENRIEQYKRENPSIFSWEIRDRLVKEGICDRS 149

Query: 70  NIPS 73
             PS
Sbjct: 150 TAPS 153


>gi|161611106|gb|ABX75227.1| Pax-6 [Pareledone charcoti]
 gi|161611118|gb|ABX75233.1| Pax-6 [Pareledone subtilis]
          Length = 97

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/52 (82%), Positives = 47/52 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLL 61
          ++ RYYETGSIRPRAIGGSKP VAT EVV KI+ +KRECPSIFAWEIRDRLL
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPXVATPEVVQKIAQFKRECPSIFAWEIRDRLL 96


>gi|270009304|gb|EFA05752.1| paired [Tribolium castaneum]
          Length = 447

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I  YKRE PSIF+WEIRDRL++EG+C   
Sbjct: 73  ILNRYQETGSIRPGVIGGSKPRVATPEVENRIEQYKRENPSIFSWEIRDRLVKEGICDRS 132

Query: 70  NIPS 73
             PS
Sbjct: 133 TAPS 136


>gi|161611112|gb|ABX75230.1| Pax-6 [Pareledone cornuta]
          Length = 97

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/52 (82%), Positives = 47/52 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLL 61
          ++ RYYE GSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEIRDRLL
Sbjct: 45 ILGRYYEPGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLL 96


>gi|321477978|gb|EFX88936.1| hypothetical protein DAPPUDRAFT_311028 [Daphnia pulex]
          Length = 162

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 52/67 (77%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGS +   IGGSKP+VAT  VV  I+ YKRE P++FAWEIRDRLL EG+C
Sbjct: 77  VSKILSRYYETGSFKAGVIGGSKPKVATPHVVDAIADYKRENPTMFAWEIRDRLLAEGIC 136

Query: 67  SNDNIPS 73
           + +N+PS
Sbjct: 137 NQENVPS 143


>gi|377685604|gb|AFB74471.1| PAX6, partial [Schmidtea polychroa]
          Length = 326

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/47 (85%), Positives = 44/47 (93%)

Query: 27 GSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIPS 73
          GSKPRVAT+ VVSKI+ YKRECPSIF+WEIRDRLLQEGVC+ DNIPS
Sbjct: 1  GSKPRVATSSVVSKIAAYKRECPSIFSWEIRDRLLQEGVCNQDNIPS 47


>gi|161611132|gb|ABX75240.1| Pax-6 [Graneledone boreopacifica]
          Length = 97

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/52 (82%), Positives = 47/52 (90%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLL 61
          ++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ +KRECPSIFAWEI DRLL
Sbjct: 45 ILGRYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIIDRLL 96


>gi|58036765|emb|CAG30843.1| pairberry [Cupiennius salei]
          Length = 211

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 50/67 (74%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  +++RY ETGSIRP  IGGSKPRVAT EV  KI  YKR+ P IF+WEIRDRL++EG+C
Sbjct: 35  VSKILNRYQETGSIRPGVIGGSKPRVATPEVEKKIEEYKRDSPGIFSWEIRDRLIKEGIC 94

Query: 67  SNDNIPS 73
                PS
Sbjct: 95  DKSTAPS 101


>gi|242007394|ref|XP_002424525.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
 gi|212507958|gb|EEB11787.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
          Length = 439

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 64/95 (67%), Gaps = 9/95 (9%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV  +I  YKRE P IF+WEIRDRL++EG+C   
Sbjct: 75  ILNRYQETGSIRPGVIGGSKPRVATPEVEKRIEDYKRENPGIFSWEIRDRLIKEGICDRS 134

Query: 70  NIPSRECPSIFAWEIR------DRLLQEGVCSNDN 98
           ++PS    S  +  +R      DR + +G  ++DN
Sbjct: 135 SVPSV---SAISRLLRGRDGEDDRKINDGCKNSDN 166


>gi|393909109|gb|EFO28340.2| pax transcription factor protein 2, partial [Loa loa]
          Length = 352

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV  I+ YKR  P++FAWEIR++LL+E VC  +
Sbjct: 121 ILGRYYETGSIRPGVIGGSKPKVATPKVVQTIAAYKRANPTMFAWEIREKLLEERVCDAE 180

Query: 70  NIPS 73
           N+PS
Sbjct: 181 NVPS 184


>gi|340724544|ref|XP_003400641.1| PREDICTED: LOW QUALITY PROTEIN: segmentation protein paired-like
           [Bombus terrestris]
          Length = 502

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV S+I  YKR+ P IF+WEIRDRL++EG+C   
Sbjct: 84  ILNRYQETGSIRPGVIGGSKPRVATPEVESRIEEYKRDNPGIFSWEIRDRLIKEGICDRT 143

Query: 70  NIPS 73
           + PS
Sbjct: 144 SAPS 147


>gi|170588929|ref|XP_001899226.1| Pax  transcription factor protein 2 [Brugia malayi]
 gi|158593439|gb|EDP32034.1| Pax transcription factor protein 2, putative [Brugia malayi]
          Length = 360

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 53/64 (82%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV  I+ YKR  P++FAWEIR++LL+E VC ++
Sbjct: 101 ILGRYYETGSIRPGVIGGSKPKVATPKVVQTIAAYKRANPTMFAWEIREKLLEERVCDSE 160

Query: 70  NIPS 73
           N+PS
Sbjct: 161 NVPS 164


>gi|37722079|gb|AAN65186.1| pax3/7 homeoprotein [Tetranychus urticae]
          Length = 185

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 50/67 (74%)

Query: 7  LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
          +  +++RY ETGSIRP  IGGSKPRVAT EV  KI  YKR+ P IFAWEIRDRL +EG+C
Sbjct: 26 VSKILNRYQETGSIRPGVIGGSKPRVATPEVEKKIEEYKRDNPGIFAWEIRDRLCKEGIC 85

Query: 67 SNDNIPS 73
            +  PS
Sbjct: 86 DKNTAPS 92


>gi|350397864|ref|XP_003485014.1| PREDICTED: LOW QUALITY PROTEIN: protein gooseberry-like [Bombus
           impatiens]
          Length = 522

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV S+I  YKR+ P IF+WEIRDRL++EG+C   
Sbjct: 109 ILNRYQETGSIRPGVIGGSKPRVATPEVESRIEEYKRDNPGIFSWEIRDRLIKEGICDRT 168

Query: 70  NIPS 73
           + PS
Sbjct: 169 SAPS 172


>gi|312065348|ref|XP_003135747.1| pax transcription factor protein 2 [Loa loa]
          Length = 332

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV  I+ YKR  P++FAWEIR++LL+E VC  +
Sbjct: 101 ILGRYYETGSIRPGVIGGSKPKVATPKVVQTIAAYKRANPTMFAWEIREKLLEERVCDAE 160

Query: 70  NIPS 73
           N+PS
Sbjct: 161 NVPS 164


>gi|148226698|ref|NP_001088995.1| paired box 7 [Xenopus laevis]
 gi|52082690|gb|AAU25938.1| myogenic specification paired-box transcription factor Pax7
           [Xenopus laevis]
          Length = 500

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/67 (64%), Positives = 50/67 (74%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRVAT +V  KI  YKRE P +F+WEIRDRLL++G C   ++P
Sbjct: 89  RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSSVP 148

Query: 73  SRECPSI 79
           S    SI
Sbjct: 149 SGLVSSI 155


>gi|301626098|ref|XP_002942235.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Xenopus
           (Silurana) tropicalis]
          Length = 502

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/67 (64%), Positives = 50/67 (74%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRVAT +V  KI  YKRE P +F+WEIRDRLL++G C   ++P
Sbjct: 89  RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSSVP 148

Query: 73  SRECPSI 79
           S    SI
Sbjct: 149 SGLVSSI 155


>gi|405977363|gb|EKC41820.1| Paired box protein Pax-7 [Crassostrea gigas]
          Length = 466

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 47/60 (78%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RY ETGSIRP  IGGSKPRVAT EV  KI  YKRE P IF+WEIRDRLL+EG+C
Sbjct: 93  VSKILQRYQETGSIRPGVIGGSKPRVATPEVEKKIEQYKRENPGIFSWEIRDRLLKEGIC 152


>gi|328782878|ref|XP_003250208.1| PREDICTED: paired box protein Pax-3-B [Apis mellifera]
          Length = 531

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I  YKR+ P IF+WEIRDRL++EG+C   
Sbjct: 112 ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEEYKRDNPGIFSWEIRDRLIKEGICDRT 171

Query: 70  NIPS 73
           + PS
Sbjct: 172 SAPS 175


>gi|399146688|gb|AFP25466.1| paired box 7 [Anas platyrhynchos]
          Length = 503

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/67 (64%), Positives = 49/67 (73%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRVAT +V  KI  YKRE P +F+WEIRDRLL++G C    +P
Sbjct: 89  RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVP 148

Query: 73  SRECPSI 79
           S    SI
Sbjct: 149 SGLVSSI 155


>gi|291238206|ref|XP_002739022.1| PREDICTED: paired box protein pax2.1 splice-like [Saccoglossus
           kowalevskii]
          Length = 328

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 53/67 (79%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RY ETGSI P AIGGSKPRV+T EV+ +IS YK E  S+FAWEIR+RLL EGVC
Sbjct: 54  VSKILSRYSETGSILPGAIGGSKPRVSTPEVIERISDYKHENSSMFAWEIRERLLIEGVC 113

Query: 67  SNDNIPS 73
           + +N+PS
Sbjct: 114 TKENLPS 120


>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
 gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
          Length = 464

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/61 (65%), Positives = 48/61 (78%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSI+P AIGGSKPRVAT EV  KI  YKR+ P +F+WEIRDRLL++G+C    +P
Sbjct: 64  RYQETGSIKPGAIGGSKPRVATPEVEKKIEDYKRDNPGMFSWEIRDRLLKDGMCDRSTVP 123

Query: 73  S 73
           S
Sbjct: 124 S 124


>gi|299906603|gb|ADJ58016.1| PaxB [Chalinula loosanoffi]
          Length = 589

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGS++P  IGGSKP+VAT +VV KI  +KR+ PSIFAWEIRDRLL E +C+  
Sbjct: 59  ILGRFYETGSVKPGIIGGSKPKVATPKVVIKIEEFKRDNPSIFAWEIRDRLLTEKICNKA 118

Query: 70  NIPS 73
           N+PS
Sbjct: 119 NVPS 122


>gi|15146039|gb|AAK82936.1| pairberry 1 transcription factor [Schistocerca americana]
          Length = 234

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 53/67 (79%)

Query: 7  LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
          +  +++RY ETGSIRP  IGGSKPRVAT EV ++I  YK+  P IF+WEIRDRL+++GVC
Sbjct: 20 VSKILNRYQETGSIRPGVIGGSKPRVATPEVEARIDDYKKANPGIFSWEIRDRLIKDGVC 79

Query: 67 SNDNIPS 73
            +++PS
Sbjct: 80 DKNSVPS 86


>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
          Length = 464

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/61 (65%), Positives = 48/61 (78%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSI+P AIGGSKPRVAT EV  KI  YKR+ P +F+WEIRDRLL++G+C    +P
Sbjct: 64  RYQETGSIKPGAIGGSKPRVATPEVEKKIEDYKRDNPGMFSWEIRDRLLKDGMCDRSTVP 123

Query: 73  S 73
           S
Sbjct: 124 S 124


>gi|383854529|ref|XP_003702773.1| PREDICTED: paired box protein Pax-3-B-like [Megachile rotundata]
          Length = 483

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I  YKR+ P IF+WEIRDRL++EG+C   
Sbjct: 64  ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEEYKRDNPGIFSWEIRDRLIKEGICDRT 123

Query: 70  NIPS 73
           + PS
Sbjct: 124 SAPS 127


>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
          Length = 470

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/61 (65%), Positives = 48/61 (78%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSI+P AIGGSKPRVAT EV  KI  YKR+ P +F+WEIRDRLL++G+C    +P
Sbjct: 64  RYQETGSIKPGAIGGSKPRVATPEVEKKIEDYKRDNPGMFSWEIRDRLLKDGMCDRSTVP 123

Query: 73  S 73
           S
Sbjct: 124 S 124


>gi|196011682|ref|XP_002115704.1| hypothetical protein TRIADDRAFT_3502 [Trichoplax adhaerens]
 gi|190581480|gb|EDV21556.1| hypothetical protein TRIADDRAFT_3502, partial [Trichoplax
           adhaerens]
          Length = 249

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 52/67 (77%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  ++ RYYETGS+RP  IGGSKP+VAT  VV+KI  +K E PSIFAWEIR++L+ E VC
Sbjct: 47  VSKILGRYYETGSVRPGTIGGSKPKVATPTVVAKIEQFKHENPSIFAWEIREKLINEKVC 106

Query: 67  SNDNIPS 73
            ++ +PS
Sbjct: 107 KDETVPS 113


>gi|2102730|gb|AAB58292.1| Pax-A1 [Chrysaora quinquecirrha]
 gi|2102732|gb|AAB58293.1| Pax-A2 [Chrysaora quinquecirrha]
          Length = 127

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS+RP AIGGSKP+VAT +VV++I   K E P +FAWEIR+ LL EGVC N 
Sbjct: 53  ILGRYYETGSVRPGAIGGSKPKVATPKVVARIVKLKEENPCMFAWEIRNTLLSEGVCDNT 112

Query: 70  NIPS 73
           N+PS
Sbjct: 113 NVPS 116


>gi|119615260|gb|EAW94854.1| paired box gene 7, isoform CRA_b [Homo sapiens]
          Length = 504

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/67 (64%), Positives = 49/67 (73%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRVAT +V  KI  YKRE P +F+WEIRDRLL++G C    +P
Sbjct: 89  RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVP 148

Query: 73  SRECPSI 79
           S    SI
Sbjct: 149 SGLVSSI 155


>gi|259053117|emb|CAX11345.1| pairberry [Parasteatoda tepidariorum]
          Length = 296

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV  KI  YKR+ P IF+WEI+DRL+++G+C  +
Sbjct: 39  ILNRYQETGSIRPGVIGGSKPRVATPEVEKKIEEYKRDNPGIFSWEIKDRLVKDGICDKE 98

Query: 70  NIPS 73
           ++PS
Sbjct: 99  SVPS 102


>gi|189240573|ref|XP_974212.2| PREDICTED: similar to AGAP010358-PA [Tribolium castaneum]
          Length = 410

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I   K+E P IF+WEIRDRL++EG+C  +
Sbjct: 71  ILNRYQETGSIRPGVIGGSKPRVATLEVEARIEQLKKEEPQIFSWEIRDRLIKEGICDKN 130

Query: 70  NIPS 73
           + PS
Sbjct: 131 SAPS 134


>gi|15146041|gb|AAK82937.1| pairberry 2 transcription factor [Schistocerca americana]
          Length = 341

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/64 (60%), Positives = 50/64 (78%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          +++RY ETGSIRP  IGGSKPRVAT E+ ++I  YK+  P IF+WEIRDRL++EGVC  +
Sbjct: 23 ILNRYQETGSIRPGVIGGSKPRVATPEIEARIEEYKKANPGIFSWEIRDRLIKEGVCDAN 82

Query: 70 NIPS 73
            PS
Sbjct: 83 TAPS 86


>gi|58036769|emb|CAG30845.1| pairberry [Cupiennius salei]
          Length = 195

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 50/67 (74%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           +  +++RY ETGSIRP  IGGSKPRVAT EV  KI  YK++ P IF+WEIRDRL+ +G+C
Sbjct: 35  VSKILNRYQETGSIRPGVIGGSKPRVATPEVEKKIEEYKQDSPGIFSWEIRDRLINDGIC 94

Query: 67  SNDNIPS 73
               +PS
Sbjct: 95  DKSTVPS 101


>gi|270012821|gb|EFA09269.1| gooseberry [Tribolium castaneum]
          Length = 406

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I   K+E P IF+WEIRDRL++EG+C  +
Sbjct: 71  ILNRYQETGSIRPGVIGGSKPRVATLEVEARIEQLKKEEPQIFSWEIRDRLIKEGICDKN 130

Query: 70  NIPS 73
           + PS
Sbjct: 131 SAPS 134


>gi|149024435|gb|EDL80932.1| similar to paired box gene 7 isoform 1 (predicted) [Rattus
           norvegicus]
          Length = 492

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRVAT +V  KI  YKRE P +F+WEIRDRLL++G C    +P
Sbjct: 79  RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVP 138

Query: 73  S 73
           S
Sbjct: 139 S 139


>gi|324529117|gb|ADY48990.1| Paired box protein Pax-5, partial [Ascaris suum]
          Length = 210

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT +VV  I+ YKR  P++FAWEIR++LL+E VC  +
Sbjct: 81  ILGRYYETGSIRPGVIGGSKPKVATPKVVQTIAAYKRANPTMFAWEIREKLLEERVCDAE 140

Query: 70  NIPS 73
           N+PS
Sbjct: 141 NVPS 144


>gi|380030868|ref|XP_003699061.1| PREDICTED: segmentation protein paired-like, partial [Apis florea]
          Length = 142

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I  YKR+ P IF+WEIRDRL++EG+C   
Sbjct: 58  ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEEYKRDNPGIFSWEIRDRLIKEGICDRT 117

Query: 70  NIPS 73
           + PS
Sbjct: 118 SAPS 121


>gi|148681370|gb|EDL13317.1| paired box gene 7 [Mus musculus]
          Length = 498

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRVAT +V  KI  YKRE P +F+WEIRDRLL++G C    +P
Sbjct: 85  RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVP 144

Query: 73  S 73
           S
Sbjct: 145 S 145


>gi|332028547|gb|EGI68584.1| Segmentation protein paired [Acromyrmex echinatior]
          Length = 492

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I  YKR+ P +F+WEIRDRL++EG+C   
Sbjct: 94  ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEEYKRDNPGMFSWEIRDRLIKEGICERT 153

Query: 70  NIPS 73
           + PS
Sbjct: 154 SAPS 157


>gi|322794106|gb|EFZ17315.1| hypothetical protein SINV_02934 [Solenopsis invicta]
          Length = 486

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I  YKR+ P +F+WEIRDRL++EG+C   
Sbjct: 72  ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEEYKRDNPGMFSWEIRDRLIKEGICDRT 131

Query: 70  NIPS 73
           + PS
Sbjct: 132 SAPS 135


>gi|391327510|ref|XP_003738241.1| PREDICTED: paired box protein Pax-7-like [Metaseiulus occidentalis]
          Length = 665

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/64 (59%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT +V  +I  Y++E P IF+WEIRDRL++EG+C  +
Sbjct: 254 ILNRYQETGSIRPGVIGGSKPRVATPDVEKRIEDYRKENPGIFSWEIRDRLVKEGICDRN 313

Query: 70  NIPS 73
             PS
Sbjct: 314 TAPS 317


>gi|432098045|gb|ELK27932.1| Paired box protein Pax-7 [Myotis davidii]
          Length = 592

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRVAT +V  KI  YKRE P +F+WEIRDRLL++G C    +P
Sbjct: 215 RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVP 274

Query: 73  S 73
           S
Sbjct: 275 S 275


>gi|347963077|ref|XP_311100.5| AGAP000057-PA [Anopheles gambiae str. PEST]
 gi|333467371|gb|EAA06142.5| AGAP000057-PA [Anopheles gambiae str. PEST]
          Length = 551

 Score = 89.0 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/64 (57%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I+ YK + P++FAWEIRD+LL +G+C +D
Sbjct: 76  ILSRYYETGSFKAGVIGGSKPKVATPPVVEAIAAYKLQNPTMFAWEIRDKLLADGICVHD 135

Query: 70  NIPS 73
           N+PS
Sbjct: 136 NVPS 139


>gi|402853155|ref|XP_003891265.1| PREDICTED: paired box protein Pax-7 [Papio anubis]
          Length = 504

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRVAT +V  KI  YKRE P +F+WEIRDRLL++G C    +P
Sbjct: 89  RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|312379688|gb|EFR25884.1| hypothetical protein AND_08376 [Anopheles darlingi]
          Length = 601

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/64 (57%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I+ YK + P++FAWEIRD+LL +G+C +D
Sbjct: 66  ILSRYYETGSFKAGVIGGSKPKVATPPVVEAIAAYKLQNPTMFAWEIRDKLLADGICVHD 125

Query: 70  NIPS 73
           N+PS
Sbjct: 126 NVPS 129


>gi|185133665|ref|NP_001117167.1| paired box protein 7 [Salmo salar]
 gi|51869693|emb|CAH04383.1| paired box protein 7 [Salmo salar]
          Length = 520

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 162 PSGEASSV 169


>gi|41581181|emb|CAF02090.1| paired box protein 7 [Salmo salar]
          Length = 519

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 162 PSGEASSV 169


>gi|53125916|emb|CAG25520.1| paired box protein 7 [Salvelinus alpinus]
          Length = 513

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/61 (63%), Positives = 48/61 (78%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRV+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +P
Sbjct: 102 RYQETGSIRPGAIGGSKPRVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTVP 161

Query: 73  S 73
           S
Sbjct: 162 S 162


>gi|51869695|emb|CAH04384.1| paired box protein 7 [Salmo salar]
          Length = 515

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 162 PSGEASSV 169


>gi|381216178|gb|AFF61349.1| paired box protein 7 alpha variant 3 [Oncorhynchus mykiss]
          Length = 506

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|381216174|gb|AFF61347.1| paired box protein 7 alpha variant 1 [Oncorhynchus mykiss]
          Length = 515

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 162 PSGEASSV 169


>gi|2102734|gb|AAB58294.1| Pax-B [Chrysaora quinquecirrha]
          Length = 127

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT  VV KI+ YK   P++FAWEIRDRLL + VC+ +
Sbjct: 53  ILGRYYETGSIKPGVIGGSKPKVATPMVVGKIADYKIANPTMFAWEIRDRLLLDSVCTQE 112

Query: 70  NIPS 73
           N+PS
Sbjct: 113 NVPS 116


>gi|431906260|gb|ELK10457.1| Paired box protein Pax-7 [Pteropus alecto]
          Length = 249

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKPRVAT +V  KI  YKRE P +F+WEIRDRLL++G C    +P
Sbjct: 79  RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVP 138

Query: 73  S 73
           S
Sbjct: 139 S 139


>gi|385251415|ref|NP_001245266.1| paired box 7 [Oncorhynchus mykiss]
 gi|381216180|gb|AFF61350.1| paired box protein 7 alpha variant 4 [Oncorhynchus mykiss]
          Length = 502

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|170040706|ref|XP_001848131.1| paired box protein pax-6 [Culex quinquefasciatus]
 gi|167864314|gb|EDS27697.1| paired box protein pax-6 [Culex quinquefasciatus]
          Length = 527

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/64 (57%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I+ YK + P++FAWEIRD+LL +G+C +D
Sbjct: 58  ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIAAYKLQNPTMFAWEIRDKLLADGICVHD 117

Query: 70  NIPS 73
           N+PS
Sbjct: 118 NVPS 121


>gi|307180596|gb|EFN68551.1| Segmentation protein paired [Camponotus floridanus]
          Length = 516

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I  YKR+ P +F+WEIRDRL++EG+C   
Sbjct: 71  ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEEYKRDNPGMFSWEIRDRLIKEGICDRT 130

Query: 70  NIPS 73
           + PS
Sbjct: 131 SAPS 134


>gi|53126008|emb|CAG25717.1| paired box protein 7 [Salvelinus alpinus]
          Length = 502

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|51869701|emb|CAH04387.1| paired box protein 7 [Salmo salar]
          Length = 502

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|312382242|gb|EFR27765.1| hypothetical protein AND_05156 [Anopheles darlingi]
          Length = 439

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K++ P IFAWEIRDRLL +GVC  +
Sbjct: 134 ILARYHETGSILPGAIGGSKPRVTTPKVVTYIRELKQKDPGIFAWEIRDRLLSDGVCDKN 193

Query: 70  NIPS 73
           N+PS
Sbjct: 194 NVPS 197


>gi|51869705|emb|CAH04389.1| paired box protein 7 [Salmo salar]
          Length = 508

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|186680510|gb|ACC86106.1| paired box protein 7 [Sternopygus macrurus]
          Length = 507

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|186680512|gb|ACC86107.1| paired box protein 7 transcript variant 1 [Sternopygus macrurus]
          Length = 300

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|432857455|ref|XP_004068689.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oryzias
           latipes]
          Length = 510

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 90  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 149

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 150 PSGEASSV 157


>gi|432857453|ref|XP_004068688.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oryzias
           latipes]
          Length = 508

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 90  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 149

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 150 PSGEASSV 157


>gi|46326996|gb|AAS88436.1| Pax-6 [Raja eglanteria]
          Length = 77

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/47 (87%), Positives = 44/47 (93%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEI 56
          ++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEI
Sbjct: 31 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEI 77


>gi|195452518|ref|XP_002073388.1| GK14101 [Drosophila willistoni]
 gi|194169473|gb|EDW84374.1| GK14101 [Drosophila willistoni]
          Length = 367

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 66  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 125

Query: 70  NIPS 73
           N+PS
Sbjct: 126 NVPS 129


>gi|195391788|ref|XP_002054542.1| GJ22751 [Drosophila virilis]
 gi|194152628|gb|EDW68062.1| GJ22751 [Drosophila virilis]
          Length = 462

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 184 ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 243

Query: 70  NIPS 73
           N+PS
Sbjct: 244 NVPS 247


>gi|24158435|ref|NP_571400.1| paired box 7 isoform 1 [Danio rerio]
 gi|2909769|gb|AAC41255.1| transcription factor PAX7C [Danio rerio]
 gi|122891363|emb|CAM12909.1| paired box gene 7 [Danio rerio]
 gi|190337573|gb|AAI63502.1| Paired box gene 7a [Danio rerio]
 gi|190337587|gb|AAI63523.1| Paired box gene 7a [Danio rerio]
          Length = 507

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|357608260|gb|EHJ65894.1| gooseberry [Danaus plexippus]
          Length = 471

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/64 (59%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I   KR+ P IF+WEIRD+L++EG+C  +
Sbjct: 71  ILNRYQETGSIRPGVIGGSKPRVATPEVENRIEELKRQNPGIFSWEIRDKLIKEGICDKN 130

Query: 70  NIPS 73
             PS
Sbjct: 131 TAPS 134


>gi|24158433|ref|NP_571399.1| paired box 7 isoform 4 [Danio rerio]
 gi|2909767|gb|AAC41254.1| transcription factor PAX7A [Danio rerio]
          Length = 280

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|334348611|ref|XP_001371624.2| PREDICTED: paired box protein Pax-4-like [Monodelphis domestica]
          Length = 256

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYY TG++ P+ IGGSKPR+ATA VV++I+  K ECP+IFAWEIR +L  EG+C+ D
Sbjct: 57  ILGRYYRTGTLEPKGIGGSKPRLATAPVVARIAQLKGECPTIFAWEIRHQLCAEGLCTQD 116

Query: 70  NIPS 73
             PS
Sbjct: 117 RTPS 120


>gi|6465862|emb|CAB61522.1| paired box protein [Podocoryna carnea]
          Length = 711

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/64 (59%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSIRP  IGGSKP+VAT  VV+KI+ YK   P++FAWEIR+RLL + +C  +
Sbjct: 126 ILGRYYETGSIRPGVIGGSKPKVATPSVVTKIAEYKIHNPTMFAWEIRERLLNDQICDVE 185

Query: 70  NIPS 73
           ++PS
Sbjct: 186 SVPS 189


>gi|348534166|ref|XP_003454574.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oreochromis
           niloticus]
          Length = 509

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|157128230|ref|XP_001661355.1| paired box protein pax-6 [Aedes aegypti]
 gi|108882242|gb|EAT46467.1| AAEL002348-PA [Aedes aegypti]
          Length = 593

 Score = 87.4 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/64 (57%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGS +   IGGSKP+VAT  VV  I+ YK + P++FAWEIRD+LL +G+C +D
Sbjct: 148 ILSRYYETGSFKAGVIGGSKPKVATPPVVDAIAAYKLQNPTMFAWEIRDKLLADGICVHD 207

Query: 70  NIPS 73
           N+PS
Sbjct: 208 NVPS 211


>gi|345304995|ref|XP_001507033.2| PREDICTED: paired box protein Pax-3 [Ornithorhynchus anatinus]
          Length = 483

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/61 (63%), Positives = 48/61 (78%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++GVC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDGVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|190608782|gb|ACE79722.1| paired-box transcription factor 1/9 [Branchiostoma lanceolatum]
          Length = 281

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T EVV  I  YK   P IFAWEIRDRLL EGVC   
Sbjct: 59  ILARYNETGSILPGAIGGSKPRVTTPEVVKAIKKYKTLDPGIFAWEIRDRLLAEGVCDKY 118

Query: 70  NIPS 73
           N+PS
Sbjct: 119 NVPS 122


>gi|53125938|emb|CAG25522.1| paired box protein 7 [Salvelinus alpinus]
          Length = 242

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 162 PSGEASSV 169


>gi|53125952|emb|CAG25524.1| paired box protein 7 [Salvelinus alpinus]
          Length = 238

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 162 PSGEASSV 169


>gi|194765997|ref|XP_001965111.1| GF23439 [Drosophila ananassae]
 gi|190617721|gb|EDV33245.1| GF23439 [Drosophila ananassae]
          Length = 613

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/64 (57%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIRD+L++EGVC   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEDYKRTNPGMFSWEIRDKLIREGVCDRS 138

Query: 70  NIPS 73
             PS
Sbjct: 139 TAPS 142


>gi|190337567|gb|AAI63492.1| Paired box gene 7a [Danio rerio]
          Length = 395

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|390178247|ref|XP_001358848.3| GA21910 [Drosophila pseudoobscura pseudoobscura]
 gi|388859377|gb|EAL27991.3| GA21910 [Drosophila pseudoobscura pseudoobscura]
          Length = 376

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 65  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 124

Query: 70  NIPS 73
           N+PS
Sbjct: 125 NVPS 128


>gi|114107892|gb|AAI23264.1| LOC496377 protein [Xenopus laevis]
          Length = 268

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 48/61 (78%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T EV  KI  +KR+ P +F+WEIRD+LL++GVC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPEVEKKIEEFKRDNPGMFSWEIRDKLLKDGVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|53125947|emb|CAG25523.1| paired box protein 7 [Salvelinus alpinus]
          Length = 238

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 162 PSGEASSV 169


>gi|24158480|ref|NP_571401.1| paired box 7 isoform 3 [Danio rerio]
 gi|2909773|gb|AAC41257.1| transcription factor PAX7E [Danio rerio]
          Length = 395

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|410898240|ref|XP_003962606.1| PREDICTED: paired box protein Pax-1-like, partial [Takifugu
           rubripes]
          Length = 360

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 57  ILARYNETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKY 116

Query: 70  NIPS 73
           N+PS
Sbjct: 117 NVPS 120


>gi|237784128|gb|ACR19857.1| PAX3/7 [Octopus bimaculoides]
          Length = 204

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 48/67 (71%)

Query: 7  LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
          +  ++ RY ETGSIRP  IGGSKPRVAT EV   I  YK+E P IF+WEIRDRLL+E +C
Sbjct: 16 VSKILQRYQETGSIRPGVIGGSKPRVATPEVEKHIELYKKENPGIFSWEIRDRLLKEAIC 75

Query: 67 SNDNIPS 73
              +PS
Sbjct: 76 DRSTVPS 82


>gi|24158437|ref|NP_571407.1| paired box 7 isoform 2 [Danio rerio]
 gi|2909771|gb|AAC41256.1| transcription factor PAX7D [Danio rerio]
          Length = 487

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|47219534|emb|CAG09888.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 325

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 55  ILARYNETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKY 114

Query: 70  NIPS 73
           N+PS
Sbjct: 115 NVPS 118


>gi|67043724|gb|AAY63958.1| green fluorescent protein-paired-box gene 9 fusion protein
           [Expression vector pEGFP-Pax9]
          Length = 593

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 307 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 366

Query: 70  NIPS 73
           N+PS
Sbjct: 367 NVPS 370


>gi|53125901|emb|CAG25526.1| paired box protein 7 [Salvelinus alpinus]
          Length = 502

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGG+KPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGNKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|52547724|gb|AAU81897.1| paired box protein Pax-7, partial [Tetraodon nigroviridis]
          Length = 196

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 88  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 147

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 148 PSGEASSV 155


>gi|4803852|emb|CAB42656.1| amphipax1 protein [Branchiostoma lanceolatum]
          Length = 330

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T EVV  I  YK   P IFAWEIRDRLL EGVC   
Sbjct: 59  ILARYNETGSILPGAIGGSKPRVTTPEVVKAIKKYKTLDPGIFAWEIRDRLLAEGVCDKY 118

Query: 70  NIPS 73
           N+PS
Sbjct: 119 NVPS 122


>gi|224493168|sp|Q0IH87.2|PAX3B_XENLA RecName: Full=Paired box protein Pax-3-B; Short=xPax3-B; AltName:
           Full=Paired-domain transcription factor Pax3-B
          Length = 483

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 48/61 (78%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T EV  KI  +KR+ P +F+WEIRD+LL++GVC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPEVEKKIEEFKRDNPGMFSWEIRDKLLKDGVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|241860183|ref|XP_002416274.1| homeobox domain-containing protein, putative [Ixodes scapularis]
 gi|215510488|gb|EEC19941.1| homeobox domain-containing protein, putative [Ixodes scapularis]
          Length = 297

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT +V  KI  YKR+ P IF+WEIRDRL+++ VC  +
Sbjct: 54  ILNRYQETGSIRPGVIGGSKPRVATPDVEQKIEEYKRDNPGIFSWEIRDRLIKDAVCDKN 113

Query: 70  NIPS 73
           + PS
Sbjct: 114 SAPS 117


>gi|348544799|ref|XP_003459868.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
           niloticus]
          Length = 512

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKR+ P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVERRIEEYKRDNPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|195110951|ref|XP_002000043.1| GI22750 [Drosophila mojavensis]
 gi|193916637|gb|EDW15504.1| GI22750 [Drosophila mojavensis]
          Length = 377

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 97  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 156

Query: 70  NIPS 73
           N+PS
Sbjct: 157 NVPS 160


>gi|390349162|ref|XP_003727157.1| PREDICTED: paired box protein Pax-1-like [Strongylocentrotus
           purpuratus]
          Length = 229

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV KI  YK+  P IFAWEIRD+LL EGVC   
Sbjct: 64  ILARYNETGSILPGAIGGSKPRVTTPNVVKKIREYKQRDPGIFAWEIRDKLLAEGVCDKY 123

Query: 70  NIPS 73
           N+PS
Sbjct: 124 NVPS 127


>gi|348544801|ref|XP_003459869.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
           niloticus]
          Length = 526

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKR+ P +F+WEIRD+LL++GVC    +
Sbjct: 103 RYQETGSIRPGAIGGSKPRQVATPDVERRIEEYKRDNPGMFSWEIRDKLLKDGVCDRSTV 162

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 163 PSGEASSV 170


>gi|301626100|ref|XP_002942236.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Xenopus
           (Silurana) tropicalis]
          Length = 509

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C   ++
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSSV 148

Query: 72  PSRE 75
           PS E
Sbjct: 149 PSGE 152


>gi|310893853|gb|ADP37890.1| paired-domain transcription factor Pax3/7-A [Lethenteron
           camtschaticum]
          Length = 507

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VA+ +V  KI  YKRE P +F+WEIRDRLL++GVC   ++
Sbjct: 79  RYQETGSIRPGAIGGSKPRQVASTDVERKIEEYKRENPGMFSWEIRDRLLKDGVCDRASV 138

Query: 72  PS 73
           PS
Sbjct: 139 PS 140


>gi|117650660|gb|ABK54274.1| Pax1/9 [Branchiostoma belcheri]
          Length = 363

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T EVV  I  YK   P IFAWEIRDRLL EGVC   
Sbjct: 59  ILARYNETGSILPGAIGGSKPRVTTPEVVKAIKKYKTLDPGIFAWEIRDRLLAEGVCDKY 118

Query: 70  NIPS 73
           N+PS
Sbjct: 119 NVPS 122


>gi|347976434|ref|XP_001689344.2| AGAP001493-PA [Anopheles gambiae str. PEST]
 gi|333467323|gb|EGK96529.1| AGAP001493-PA [Anopheles gambiae str. PEST]
          Length = 387

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K++ P IFAWEIRDRLL +GVC  +
Sbjct: 90  ILARYHETGSILPGAIGGSKPRVTTPKVVTYIRELKQKDPGIFAWEIRDRLLSDGVCDKN 149

Query: 70  NIPS 73
           N+PS
Sbjct: 150 NVPS 153


>gi|644847|gb|AAA81364.1| AmphiPax-1 [Branchiostoma floridae]
          Length = 337

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T EVV  I  YK   P IFAWEIRDRLL EGVC   
Sbjct: 59  ILARYNETGSILPGAIGGSKPRVTTPEVVKAIKKYKTLDPGIFAWEIRDRLLAEGVCDKY 118

Query: 70  NIPS 73
           N+PS
Sbjct: 119 NVPS 122


>gi|334350731|gb|AEG77354.1| paired box 2 transcript variant 2 [Columba livia]
          Length = 291

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYYETGSI+P  IGGSKP+VAT +VV KI+ YKR+ P++FA    DRLL EG+C ND
Sbjct: 66  ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAGRSWDRLLAEGICDND 125

Query: 70  NIPS 73
            +PS
Sbjct: 126 TVPS 129


>gi|391328229|ref|XP_003738592.1| PREDICTED: protein gooseberry-neuro-like [Metaseiulus occidentalis]
          Length = 478

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/64 (57%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT  V +KI  Y++  P++F+WEIRDRL+++GVC   
Sbjct: 123 ILNRYQETGSIRPGVIGGSKPRVATPIVETKIEEYRKASPTMFSWEIRDRLVKDGVCDKT 182

Query: 70  NIPS 73
            +PS
Sbjct: 183 AVPS 186


>gi|395528168|ref|XP_003766203.1| PREDICTED: paired box protein Pax-3 [Sarcophilus harrisii]
          Length = 525

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|195472307|ref|XP_002088442.1| GE12435 [Drosophila yakuba]
 gi|194174543|gb|EDW88154.1| GE12435 [Drosophila yakuba]
          Length = 612

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EGVC   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRS 138

Query: 70  NIPS 73
             PS
Sbjct: 139 TAPS 142


>gi|1840411|dbj|BAA12289.1| Pax-37 [Halocynthia roretzi]
          Length = 704

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 8/86 (9%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSI+P AIGGSKP+V  +E+ SKI  YK++ PS+F+WEIRD+L++EG+C   + P
Sbjct: 71  RYQETGSIKPGAIGGSKPKVTNSEIESKIEQYKKDSPSMFSWEIRDQLIKEGLCDRSSAP 130

Query: 73  SRECPSIFAWEIRDRLLQEGVCSNDN 98
           +    S        R+L+   C   N
Sbjct: 131 TVSAIS--------RILRSKGCDTSN 148


>gi|194903980|ref|XP_001980978.1| GG17455 [Drosophila erecta]
 gi|190652681|gb|EDV49936.1| GG17455 [Drosophila erecta]
          Length = 404

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 93  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 152

Query: 70  NIPS 73
           N+PS
Sbjct: 153 NVPS 156


>gi|195350993|ref|XP_002042021.1| GM26340 [Drosophila sechellia]
 gi|194123845|gb|EDW45888.1| GM26340 [Drosophila sechellia]
          Length = 613

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EGVC   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRS 138

Query: 70  NIPS 73
             PS
Sbjct: 139 TAPS 142


>gi|195499075|ref|XP_002096794.1| GE24855 [Drosophila yakuba]
 gi|194182895|gb|EDW96506.1| GE24855 [Drosophila yakuba]
          Length = 403

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 93  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 152

Query: 70  NIPS 73
           N+PS
Sbjct: 153 NVPS 156


>gi|195055745|ref|XP_001994773.1| GH17421 [Drosophila grimshawi]
 gi|193892536|gb|EDV91402.1| GH17421 [Drosophila grimshawi]
          Length = 347

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 61  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 120

Query: 70  NIPS 73
           N+PS
Sbjct: 121 NVPS 124


>gi|195330732|ref|XP_002032057.1| GM26349 [Drosophila sechellia]
 gi|194121000|gb|EDW43043.1| GM26349 [Drosophila sechellia]
          Length = 402

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 93  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 152

Query: 70  NIPS 73
           N+PS
Sbjct: 153 NVPS 156


>gi|327270590|ref|XP_003220072.1| PREDICTED: paired box protein Pax-1-like [Anolis carolinensis]
          Length = 446

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 78  ILARYHETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 137

Query: 70  NIPS 73
           N+PS
Sbjct: 138 NVPS 141


>gi|344268490|ref|XP_003406091.1| PREDICTED: paired box protein Pax-3 isoform 2 [Loxodonta africana]
          Length = 483

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|194861365|ref|XP_001969768.1| GG10275 [Drosophila erecta]
 gi|190661635|gb|EDV58827.1| GG10275 [Drosophila erecta]
          Length = 614

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EGVC   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRS 138

Query: 70  NIPS 73
             PS
Sbjct: 139 TAPS 142


>gi|188219638|ref|NP_001120838.1| paired box protein Pax-3 isoform PAX3i [Homo sapiens]
 gi|397495768|ref|XP_003818718.1| PREDICTED: paired box protein Pax-3 isoform 1 [Pan paniscus]
 gi|72533358|gb|AAI01300.1| Paired box 3 [Homo sapiens]
 gi|72533360|gb|AAI01303.1| Paired box 3 [Homo sapiens]
 gi|72533551|gb|AAI01301.1| Paired box 3 [Homo sapiens]
 gi|89130716|gb|AAI14364.1| Paired box 3 [Homo sapiens]
          Length = 483

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|355565224|gb|EHH21713.1| hypothetical protein EGK_04840 [Macaca mulatta]
          Length = 473

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|242015336|ref|XP_002428315.1| protein gooseberry, putative [Pediculus humanus corporis]
 gi|212512911|gb|EEB15577.1| protein gooseberry, putative [Pediculus humanus corporis]
          Length = 390

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/64 (57%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGS+RP  IGGSKPRVAT EV  +I  YK+  P IF+WEIRD+L++EG+C  +
Sbjct: 73  ILNRYQETGSVRPGVIGGSKPRVATPEVEKRIEDYKKSNPGIFSWEIRDKLIKEGICDKN 132

Query: 70  NIPS 73
           + PS
Sbjct: 133 SAPS 136


>gi|15625548|gb|AAL04156.1|AF411465_1 transcription factor Pax7 [Petromyzon marinus]
          Length = 505

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VA+ +V  KI  YKRE P +F+WEIRDRLL++GVC   ++
Sbjct: 79  RYQETGSIRPGAIGGSKPRQVASTDVERKIEEYKRENPGMFSWEIRDRLLKDGVCDRASV 138

Query: 72  PS 73
           PS
Sbjct: 139 PS 140


>gi|48928118|gb|AAT47737.1| PAX3/NCOA1 fusion protein [Homo sapiens]
          Length = 850

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|345797572|ref|XP_545664.3| PREDICTED: paired box protein Pax-3 [Canis lupus familiaris]
          Length = 482

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 88  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 147

Query: 73  S 73
           S
Sbjct: 148 S 148


>gi|395823365|ref|XP_003784957.1| PREDICTED: paired box protein Pax-3 [Otolemur garnettii]
          Length = 483

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|390464841|ref|XP_002749874.2| PREDICTED: paired box protein Pax-3 isoform 1 [Callithrix jacchus]
          Length = 483

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|116007976|ref|NP_001036687.1| Pox meso [Drosophila melanogaster]
 gi|122065913|sp|P23757.3|POXM_DROME RecName: Full=Paired box pox-meso protein; AltName: Full=Paired box
           mesodermal protein
 gi|91984703|gb|ABE69188.1| Pox meso P29c1 [Drosophila melanogaster]
 gi|91984705|gb|ABE69189.1| Pox meso P29c2 [Drosophila melanogaster]
 gi|92109780|gb|ABE73214.1| IP16421p [Drosophila melanogaster]
 gi|113194756|gb|ABI31147.1| Pox meso [Drosophila melanogaster]
          Length = 370

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 61  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 120

Query: 70  NIPS 73
           N+PS
Sbjct: 121 NVPS 124


>gi|403266765|ref|XP_003925533.1| PREDICTED: paired box protein Pax-3 isoform 2 [Saimiri boliviensis
           boliviensis]
          Length = 483

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|350596588|ref|XP_003361395.2| PREDICTED: paired box protein Pax-3 [Sus scrofa]
          Length = 509

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 119 RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 178

Query: 73  S 73
           S
Sbjct: 179 S 179


>gi|24583824|ref|NP_723721.1| paired, isoform B [Drosophila melanogaster]
 gi|123412|sp|P06601.1|PRD_DROME RecName: Full=Segmentation protein paired
 gi|158160|gb|AAB59221.1| segmentation protein [Drosophila melanogaster]
 gi|22946299|gb|AAN10801.1| paired, isoform B [Drosophila melanogaster]
          Length = 613

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EGVC   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRS 138

Query: 70  NIPS 73
             PS
Sbjct: 139 TAPS 142


>gi|195578673|ref|XP_002079188.1| GD22133 [Drosophila simulans]
 gi|194191197|gb|EDX04773.1| GD22133 [Drosophila simulans]
          Length = 613

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EGVC   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRS 138

Query: 70  NIPS 73
             PS
Sbjct: 139 TAPS 142


>gi|402889486|ref|XP_003908046.1| PREDICTED: paired box protein Pax-3 isoform 1 [Papio anubis]
          Length = 483

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|410930245|ref|XP_003978509.1| PREDICTED: paired box protein Pax-7-like, partial [Takifugu
           rubripes]
          Length = 198

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKR+ P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRDNPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|213626247|gb|AAI70120.1| LOC496378 protein [Xenopus laevis]
          Length = 501

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C   ++
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSSV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|432103455|gb|ELK30560.1| Paired box protein Pax-3 [Myotis davidii]
          Length = 506

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 78  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 137

Query: 73  S 73
           S
Sbjct: 138 S 138


>gi|195144822|ref|XP_002013395.1| GL24118 [Drosophila persimilis]
 gi|194102338|gb|EDW24381.1| GL24118 [Drosophila persimilis]
          Length = 229

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 87  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 146

Query: 70  NIPS 73
           N+PS
Sbjct: 147 NVPS 150


>gi|225903375|ref|NP_001139621.1| paired box gene 7b [Danio rerio]
 gi|225355242|gb|ACN88553.1| paired box protein 7b [Danio rerio]
          Length = 510

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 5/72 (6%)

Query: 13  RYYETGSIRPRAIGGSKPR-----VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCS 67
           RY ETGSIRP AIGGSKPR     VAT +V  +I  YKRE P +F+WEIRD+LL++GVC 
Sbjct: 89  RYQETGSIRPGAIGGSKPRQTQKQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCD 148

Query: 68  NDNIPSRECPSI 79
              +PS E  S+
Sbjct: 149 RSTVPSGEASSV 160


>gi|254733062|gb|ACT79976.1| pox-meso, partial [Nasonia vitripennis]
          Length = 125

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRVAT +VV  I   K + P IFAWEIRDRLL +GVC   
Sbjct: 51  ILARYHETGSILPGAIGGSKPRVATPKVVQYIKQLKHKDPGIFAWEIRDRLLSDGVCDKY 110

Query: 70  NIPS 73
           N+PS
Sbjct: 111 NVPS 114


>gi|194744207|ref|XP_001954586.1| GF16668 [Drosophila ananassae]
 gi|190627623|gb|EDV43147.1| GF16668 [Drosophila ananassae]
          Length = 372

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 63  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 122

Query: 70  NIPS 73
           N+PS
Sbjct: 123 NVPS 126


>gi|123704971|ref|NP_001074061.1| paired box protein Pax-1 [Danio rerio]
 gi|120538212|gb|AAI29449.1| Zgc:158781 [Danio rerio]
          Length = 359

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 61  ILARYNETGSILPGAIGGSKPRVTTPNVVKNIRDYKQSDPGIFAWEIRDRLLADGVCDKY 120

Query: 70  NIPS 73
           N+PS
Sbjct: 121 NVPS 124


>gi|167773479|gb|ABZ92174.1| paired box 3 [synthetic construct]
          Length = 835

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|431917931|gb|ELK17160.1| Paired box protein Pax-3 [Pteropus alecto]
          Length = 267

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|348517493|ref|XP_003446268.1| PREDICTED: paired box protein Pax-1-like [Oreochromis niloticus]
          Length = 361

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|285026408|ref|NP_001165520.1| paired-box transcription factor pax1 [Oryzias latipes]
 gi|254995975|dbj|BAH86769.1| paired-box transcription factor pax1 [Oryzias latipes]
          Length = 356

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|449496563|ref|XP_002197278.2| PREDICTED: paired box protein Pax-1 [Taeniopygia guttata]
          Length = 566

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 269 ILARYHETGSILPGAIGGSKPRVTTPAVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 328

Query: 70  NIPS 73
           N+PS
Sbjct: 329 NVPS 332


>gi|51869699|emb|CAH04386.1| paired box protein 7 [Salmo salar]
          Length = 506

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ET SIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETSSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|17737409|ref|NP_523556.1| paired, isoform A [Drosophila melanogaster]
 gi|7297914|gb|AAF53160.1| paired, isoform A [Drosophila melanogaster]
 gi|16076848|gb|AAL13353.1| GH22686p [Drosophila melanogaster]
 gi|220945620|gb|ACL85353.1| prd-PA [synthetic construct]
 gi|220952756|gb|ACL88921.1| prd-PA [synthetic construct]
          Length = 590

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EGVC   
Sbjct: 56  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRS 115

Query: 70  NIPS 73
             PS
Sbjct: 116 TAPS 119


>gi|327259375|ref|XP_003214513.1| PREDICTED: paired box protein Pax-9-like [Anolis carolinensis]
          Length = 398

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 141 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 200

Query: 70  NIPS 73
           N+PS
Sbjct: 201 NVPS 204


>gi|354505476|ref|XP_003514794.1| PREDICTED: paired box protein Pax-3-like [Cricetulus griseus]
          Length = 331

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|410919965|ref|XP_003973454.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
          Length = 447

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|357601948|gb|EHJ63203.1| pox meso [Danaus plexippus]
          Length = 232

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VVS I   K + P IFAWEIRDRLL +GVC   
Sbjct: 97  ILARYHETGSILPGAIGGSKPRVTTPKVVSYIKQLKAKDPGIFAWEIRDRLLADGVCDKY 156

Query: 70  NIPS 73
           N+PS
Sbjct: 157 NVPS 160


>gi|348570856|ref|XP_003471212.1| PREDICTED: paired box protein Pax-7 [Cavia porcellus]
          Length = 517

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 104 RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 163

Query: 72  PS 73
           PS
Sbjct: 164 PS 165


>gi|1405549|emb|CAA34860.1| paired box pox meso protein [Drosophila melanogaster]
          Length = 138

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K+  P IFAWEIRDRLL EG+C   
Sbjct: 61  ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 120

Query: 70  NIPS 73
           N+PS
Sbjct: 121 NVPS 124


>gi|41581183|emb|CAF02091.1| paired box protein 7 [Salmo salar]
          Length = 514

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PS 73
           PS
Sbjct: 162 PS 163


>gi|403287533|ref|XP_003934998.1| PREDICTED: paired box protein Pax-7 [Saimiri boliviensis
           boliviensis]
          Length = 502

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|381216176|gb|AFF61348.1| paired box protein 7 alpha variant 2 [Oncorhynchus mykiss]
          Length = 514

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PS 73
           PS
Sbjct: 162 PS 163


>gi|351715916|gb|EHB18835.1| Paired box protein Pax-1 [Heterocephalus glaber]
          Length = 492

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 82  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 141

Query: 70  NIPS 73
           N+PS
Sbjct: 142 NVPS 145


>gi|432916066|ref|XP_004079275.1| PREDICTED: paired box protein Pax-3 [Oryzias latipes]
          Length = 487

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPRVATA-EVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKP+  T+ E+  KI  YKRE P +F+WEIRD+LL++G+C  +N+
Sbjct: 89  RYQETGSIRPGAIGGSKPKQTTSPEIDKKIEEYKRETPGMFSWEIRDKLLKDGICDRNNV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|348500845|ref|XP_003437982.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
          Length = 546

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKP+  A+ EV  KI  YKRE P +F+WEIRD+LL++G+C  +N+
Sbjct: 89  RYQETGSIRPGAIGGSKPKQTASPEVDKKIEEYKRENPGMFSWEIRDKLLKDGICDRNNV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|53125980|emb|CAG25715.1| paired box protein 7 [Salvelinus alpinus]
          Length = 510

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PS 73
           PS
Sbjct: 162 PS 163


>gi|53125887|emb|CAG25525.1| paired box protein 7 [Salvelinus alpinus]
          Length = 497

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|395821127|ref|XP_003783899.1| PREDICTED: paired box protein Pax-7 [Otolemur garnettii]
          Length = 505

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|344283453|ref|XP_003413486.1| PREDICTED: paired box protein Pax-7-like [Loxodonta africana]
          Length = 505

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|334310817|ref|XP_001366875.2| PREDICTED: paired box protein Pax-9-like [Monodelphis domestica]
          Length = 444

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 158 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 217

Query: 70  NIPS 73
           N+PS
Sbjct: 218 NVPS 221


>gi|301779609|ref|XP_002925222.1| PREDICTED: paired box protein Pax-3-like [Ailuropoda melanoleuca]
          Length = 483

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|207029223|ref|NP_001128726.1| paired box protein Pax-7 isoform 3 [Homo sapiens]
 gi|114554356|ref|XP_001157066.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pan troglodytes]
 gi|426328069|ref|XP_004024825.1| PREDICTED: paired box protein Pax-7 isoform 2 [Gorilla gorilla
           gorilla]
 gi|410341459|gb|JAA39676.1| paired box 7 [Pan troglodytes]
          Length = 505

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|326677350|ref|XP_700877.5| PREDICTED: paired box protein Pax-1 [Danio rerio]
          Length = 338

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 58  ILARYNETGSILPGAIGGSKPRVTTPNVVKSIRDYKQGDPGIFAWEIRDRLLADGVCDKY 117

Query: 70  NIPS 73
           N+PS
Sbjct: 118 NVPS 121


>gi|426221627|ref|XP_004005010.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Ovis
           aries]
          Length = 489

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 95  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 154

Query: 73  S 73
           S
Sbjct: 155 S 155


>gi|338725617|ref|XP_001495022.3| PREDICTED: paired box protein Pax-3 isoform 1 [Equus caballus]
          Length = 483

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|431894118|gb|ELK03918.1| Paired box protein Pax-1 [Pteropus alecto]
          Length = 408

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I +YK+  P IFAWEIRDRLL +GVC   
Sbjct: 121 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRNYKQGDPGIFAWEIRDRLLADGVCDKY 180

Query: 70  NIPS 73
           N+PS
Sbjct: 181 NVPS 184


>gi|74137227|dbj|BAE21998.1| unnamed protein product [Mus musculus]
          Length = 361

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|200224|gb|AAA39888.1| Pax-1 protein [Mus musculus]
          Length = 361

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|9501358|emb|CAB38370.1| Pax1 protein [Mus musculus]
 gi|12658965|gb|AAK01146.1| PAX1 [Mus musculus]
 gi|148696578|gb|EDL28525.1| paired box gene 1 [Mus musculus]
 gi|187954343|gb|AAI40990.1| Pax1 protein [Mus musculus]
          Length = 361

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|327387652|gb|AEA72424.1| paired-box 3 [Solea senegalensis]
          Length = 221

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%), Gaps = 5/69 (7%)

Query: 6   LLCPLVHRYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEG 64
           +LC    RY ETGSIRP AIGGSKP+  AT EV  KI  YK E P +F+WEIRD+LL++G
Sbjct: 44  ILC----RYQETGSIRPGAIGGSKPKQTATPEVDKKIEEYKTENPGMFSWEIRDKLLKDG 99

Query: 65  VCSNDNIPS 73
           +C  +NIPS
Sbjct: 100 ICDRNNIPS 108


>gi|410966276|ref|XP_003989659.1| PREDICTED: paired box protein Pax-7 [Felis catus]
          Length = 503

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|386786189|gb|AFJ32801.1| paired box 7, partial [Gadus morhua]
          Length = 157

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%), Gaps = 5/69 (7%)

Query: 6  LLCPLVHRYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEG 64
          +LC    RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++G
Sbjct: 9  ILC----RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDG 64

Query: 65 VCSNDNIPS 73
          VC    +PS
Sbjct: 65 VCDRSTVPS 73


>gi|119888927|ref|XP_616352.3| PREDICTED: paired box protein Pax-7 isoform 1 [Bos taurus]
 gi|297472329|ref|XP_002685784.1| PREDICTED: paired box protein Pax-7 [Bos taurus]
 gi|296490095|tpg|DAA32208.1| TPA: paired box 7 [Bos taurus]
          Length = 505

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|83940796|gb|ABC48797.1| PAX7 transcriptional factor isoform B [Homo sapiens]
          Length = 505

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|297666243|ref|XP_002811443.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pongo abelii]
          Length = 505

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|9967369|dbj|BAB12396.1| paired box protein [Lethenteron camtschaticum]
          Length = 393

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV+ I  YK+  P IFAWEIRD+LL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVNHIRTYKQRDPGIFAWEIRDKLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|397486749|ref|XP_003814486.1| PREDICTED: paired box protein Pax-7 [Pan paniscus]
          Length = 505

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|560583|gb|AAB30807.1| PAX7-FKHR=chimeric transcription factor(FKHR, PAX7) {translocation}
           [human, alveolar rhabdomyosarcoma patient, Peptide, 420
           aa]
          Length = 420

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 50/69 (72%), Gaps = 5/69 (7%)

Query: 6   LLCPLVHRYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEG 64
           +LC    RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G
Sbjct: 57  ILC----RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDG 112

Query: 65  VCSNDNIPS 73
            C    +PS
Sbjct: 113 HCDRSTVPS 121


>gi|301611748|ref|XP_002935394.1| PREDICTED: paired box protein Pax-9-like [Xenopus (Silurana)
           tropicalis]
          Length = 360

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|255689730|gb|ACU30148.1| paired box 3 [Monodelphis domestica]
          Length = 319

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 49/68 (72%), Gaps = 4/68 (5%)

Query: 6   LLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGV 65
           +LC    RY ETGSIRP AIGGSKP+  T +V  KI  YKRE P +F+WEIRD+LL++ V
Sbjct: 57  ILC----RYQETGSIRPGAIGGSKPKATTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAV 112

Query: 66  CSNDNIPS 73
           C  + +PS
Sbjct: 113 CDRNTVPS 120


>gi|296206868|ref|XP_002750384.1| PREDICTED: paired box protein Pax-7 [Callithrix jacchus]
          Length = 502

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|301782923|ref|XP_002926876.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
           [Ailuropoda melanoleuca]
          Length = 505

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|108998495|ref|XP_001091106.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Macaca mulatta]
          Length = 505

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|440892608|gb|ELR45722.1| Paired box protein Pax-7 [Bos grunniens mutus]
          Length = 502

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|432857459|ref|XP_004068691.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oryzias
           latipes]
          Length = 517

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PS 73
           PS
Sbjct: 162 PS 163


>gi|53125966|emb|CAG25714.1| paired box protein 7 [Salvelinus alpinus]
          Length = 505

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRE 75
           PS E
Sbjct: 149 PSGE 152


>gi|53126022|emb|CAG25718.1| paired box protein 7 [Salvelinus alpinus]
          Length = 501

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRE 75
           PS E
Sbjct: 149 PSGE 152


>gi|381216182|gb|AFF61351.1| paired box protein 7 beta variant 1 [Oncorhynchus mykiss]
          Length = 518

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PSRE 75
           PS E
Sbjct: 162 PSGE 165


>gi|345794077|ref|XP_544533.3| PREDICTED: paired box protein Pax-7 [Canis lupus familiaris]
          Length = 636

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 220 RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 279

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 280 PSGLVSSI 287


>gi|338721869|ref|XP_001504451.3| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
           [Equus caballus]
          Length = 510

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|432857457|ref|XP_004068690.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oryzias
           latipes]
          Length = 511

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PS 73
           PS
Sbjct: 162 PS 163


>gi|51869703|emb|CAH04388.1| paired box protein 7 [Salmo salar]
          Length = 516

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTV 161

Query: 72  PS 73
           PS
Sbjct: 162 PS 163


>gi|449275903|gb|EMC84639.1| Paired box protein Pax-7 [Columba livia]
          Length = 524

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|381216184|gb|AFF61352.1| paired box protein 7 beta variant 2 [Oncorhynchus mykiss]
          Length = 514

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PSRE 75
           PS E
Sbjct: 162 PSGE 165


>gi|291290909|ref|NP_001167485.1| paired box 9 [Xenopus laevis]
 gi|54037990|gb|AAH84222.1| Unknown (protein for MGC:80836) [Xenopus laevis]
 gi|393689248|gb|AFN10838.1| paired box transcription factor [Xenopus laevis]
          Length = 360

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|355750875|gb|EHH55202.1| hypothetical protein EGM_04358 [Macaca fascicularis]
          Length = 473

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 47/61 (77%)

Query: 13  RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
           RY ETGSIRP AIGGSKP+V T +V  KI  YKRE P +F+WEIRD+LL++ VC  + +P
Sbjct: 89  RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVP 148

Query: 73  S 73
           S
Sbjct: 149 S 149


>gi|348534168|ref|XP_003454575.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oreochromis
           niloticus]
          Length = 518

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 103 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 162

Query: 72  PS 73
           PS
Sbjct: 163 PS 164


>gi|432092126|gb|ELK24812.1| Paired box protein Pax-1 [Myotis davidii]
          Length = 343

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 96  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 155

Query: 70  NIPS 73
           N+PS
Sbjct: 156 NVPS 159


>gi|291399413|ref|XP_002716105.1| PREDICTED: paired box 7 [Oryctolagus cuniculus]
          Length = 497

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 83  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 142

Query: 72  PS 73
           PS
Sbjct: 143 PS 144


>gi|41581185|emb|CAF02092.1| paired box protein 7 [Salmo salar]
          Length = 501

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AI GSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIRGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRECPSI 79
           PS E  S+
Sbjct: 149 PSGEASSV 156


>gi|381216190|gb|AFF61355.1| paired box protein 7 beta variant 5 [Oncorhynchus mykiss]
          Length = 501

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRE 75
           PS E
Sbjct: 149 PSGE 152


>gi|381216188|gb|AFF61354.1| paired box protein 7 beta variant 4 [Oncorhynchus mykiss]
          Length = 505

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PSRE 75
           PS E
Sbjct: 149 PSGE 152


>gi|119905393|ref|XP_617873.3| PREDICTED: paired box protein Pax-1 [Bos taurus]
          Length = 428

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 69  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 128

Query: 70  NIPS 73
           N+PS
Sbjct: 129 NVPS 132


>gi|328704750|ref|XP_003242591.1| PREDICTED: hypothetical protein LOC100164585 [Acyrthosiphon pisum]
          Length = 639

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/64 (60%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGS+ P AIGGSKPRV T  VV+ I   KR+ P +FAWEIRDRLL +GVC   
Sbjct: 244 ILARYHETGSVLPGAIGGSKPRVTTPRVVAYIGRLKRKDPGVFAWEIRDRLLADGVCDKF 303

Query: 70  NIPS 73
           N+PS
Sbjct: 304 NVPS 307


>gi|260178657|gb|ACX34051.1| paired box transcription factor 7 isoform 2 [Maylandia sp. 'Kompakt
           Mbamba Bay']
          Length = 505

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|71727369|gb|AAZ39846.1| paired box 9, partial [Papio anubis]
          Length = 208

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 51/83 (61%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 54  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 113

Query: 70  NIPSRECPSIFAWEIRDRLLQEG 92
           N+PS    S         L Q+G
Sbjct: 114 NVPSVSSISRILRNKIGNLAQQG 136


>gi|326537181|emb|CBX36142.1| pairberry-2 protein [Glomeris marginata]
          Length = 210

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 9/76 (11%)

Query: 7   LCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLL----- 61
           +  +++RY ETGSIRP  IGGSKPRVAT EV  KI  YKR+ P IF+WEIRDRL+     
Sbjct: 35  VSKILNRYQETGSIRPGVIGGSKPRVATPEVEKKIEEYKRDNPGIFSWEIRDRLIKAVGG 94

Query: 62  ----QEGVCSNDNIPS 73
               QEGVC   + PS
Sbjct: 95  RLHVQEGVCDRPSAPS 110


>gi|355778530|gb|EHH63566.1| hypothetical protein EGM_16559 [Macaca fascicularis]
          Length = 371

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 85  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 144

Query: 70  NIPS 73
           N+PS
Sbjct: 145 NVPS 148


>gi|348534164|ref|XP_003454573.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
           niloticus]
          Length = 516

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 103 RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 162

Query: 72  PS 73
           PS
Sbjct: 163 PS 164


>gi|4996232|dbj|BAA78380.1| Pax1/9 [Ptychodera flava]
          Length = 383

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV+ I  YK+  P IFAWEIRDRL+ +GVC   
Sbjct: 60  ILARYNETGSILPGAIGGSKPRVTTPTVVNHIKEYKQHDPGIFAWEIRDRLMADGVCDKY 119

Query: 70  NIPS 73
           N+PS
Sbjct: 120 NVPS 123


>gi|444722473|gb|ELW63165.1| Paired box protein Pax-9 [Tupaia chinensis]
          Length = 356

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 108 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 167

Query: 70  NIPS 73
           N+PS
Sbjct: 168 NVPS 171


>gi|71727373|gb|AAZ39848.1| paired box 9, partial [Colobus angolensis palliatus]
          Length = 208

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 51/83 (61%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 54  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 113

Query: 70  NIPSRECPSIFAWEIRDRLLQEG 92
           N+PS    S         L Q+G
Sbjct: 114 NVPSVSSISRILRNKIGNLAQQG 136


>gi|397523636|ref|XP_003831830.1| PREDICTED: paired box protein Pax-9 [Pan paniscus]
 gi|88922925|sp|Q2VL62.1|PAX9_PANTR RecName: Full=Paired box protein Pax-9
 gi|71727388|gb|AAZ39854.1| paired box 9 [Pan troglodytes verus]
          Length = 341

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|7242167|ref|NP_006185.1| paired box protein Pax-9 [Homo sapiens]
 gi|426376723|ref|XP_004055141.1| PREDICTED: paired box protein Pax-9 [Gorilla gorilla gorilla]
 gi|8247954|sp|P55771.3|PAX9_HUMAN RecName: Full=Paired box protein Pax-9
 gi|4699896|emb|CAB41533.1| pax9 protein [Homo sapiens]
 gi|12654643|gb|AAH01159.1| Paired box 9 [Homo sapiens]
 gi|87080656|dbj|BAE79273.1| paired box protein 9 [Homo sapiens]
 gi|119586257|gb|EAW65853.1| paired box gene 9 [Homo sapiens]
 gi|157928432|gb|ABW03512.1| paired box 9 [synthetic construct]
 gi|157929080|gb|ABW03825.1| paired box 9 [synthetic construct]
 gi|208966988|dbj|BAG73508.1| paired box 9 [synthetic construct]
          Length = 341

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|71727375|gb|AAZ39849.1| paired box 9, partial [Ateles geoffroyi]
 gi|71727377|gb|AAZ39850.1| paired box 9, partial [Lagothrix lagotricha]
 gi|71727379|gb|AAZ39851.1| paired box 9, partial [Pithecia pithecia]
 gi|71727381|gb|AAZ39852.1| paired box 9, partial [Otolemur garnettii]
          Length = 208

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 51/83 (61%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 54  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 113

Query: 70  NIPSRECPSIFAWEIRDRLLQEG 92
           N+PS    S         L Q+G
Sbjct: 114 NVPSVSSISRILRNKIGNLAQQG 136


>gi|71727359|gb|AAZ39841.1| paired box 9, partial [Pan paniscus]
 gi|71727361|gb|AAZ39842.1| paired box 9, partial [Gorilla gorilla gorilla]
 gi|71727363|gb|AAZ39843.1| paired box 9, partial [Pongo abelii]
 gi|71727365|gb|AAZ39844.1| paired box 9, partial [Symphalangus syndactylus]
 gi|71727367|gb|AAZ39845.1| paired box 9, partial [Mandrillus leucophaeus]
 gi|71727371|gb|AAZ39847.1| paired box 9, partial [Cercopithecus cephus]
 gi|313506878|gb|ADR64954.1| paired box 9 [Homo sapiens]
 gi|313506880|gb|ADR64955.1| paired box 9 [Homo sapiens]
 gi|313506882|gb|ADR64956.1| paired box 9 [Homo sapiens]
 gi|313506884|gb|ADR64957.1| paired box 9 [Homo sapiens]
 gi|313506886|gb|ADR64958.1| paired box 9 [Homo sapiens]
 gi|313506888|gb|ADR64959.1| paired box 9 [Homo sapiens]
 gi|313506890|gb|ADR64960.1| paired box 9 [Homo sapiens]
 gi|313506892|gb|ADR64961.1| paired box 9 [Homo sapiens]
 gi|313506894|gb|ADR64962.1| paired box 9 [Homo sapiens]
 gi|313506896|gb|ADR64963.1| paired box 9 [Homo sapiens]
 gi|313506898|gb|ADR64964.1| paired box 9 [Homo sapiens]
 gi|313506900|gb|ADR64965.1| paired box 9 [Homo sapiens]
 gi|313506902|gb|ADR64966.1| paired box 9 [Homo sapiens]
 gi|313506904|gb|ADR64967.1| paired box 9 [Homo sapiens]
 gi|313506906|gb|ADR64968.1| paired box 9 [Homo sapiens]
 gi|313506908|gb|ADR64969.1| paired box 9 [Homo sapiens]
 gi|313506910|gb|ADR64970.1| paired box 9 [Homo sapiens]
 gi|313506912|gb|ADR64971.1| paired box 9 [Homo sapiens]
 gi|313506914|gb|ADR64972.1| paired box 9 [Homo sapiens]
 gi|313506916|gb|ADR64973.1| paired box 9 [Homo sapiens]
 gi|313506918|gb|ADR64974.1| paired box 9 [Homo sapiens]
 gi|313506920|gb|ADR64975.1| paired box 9 [Homo sapiens]
 gi|313506922|gb|ADR64976.1| paired box 9 [Homo sapiens]
 gi|313506924|gb|ADR64977.1| paired box 9 [Homo sapiens]
          Length = 208

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 51/83 (61%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 54  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 113

Query: 70  NIPSRECPSIFAWEIRDRLLQEG 92
           N+PS    S         L Q+G
Sbjct: 114 NVPSVSSISRILRNKIGNLAQQG 136


>gi|297260417|ref|XP_001095275.2| PREDICTED: paired box protein Pax-1 [Macaca mulatta]
          Length = 433

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 126 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 185

Query: 70  NIPS 73
           N+PS
Sbjct: 186 NVPS 189


>gi|348581308|ref|XP_003476419.1| PREDICTED: paired box protein Pax-1 [Cavia porcellus]
          Length = 447

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 140 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 199

Query: 70  NIPS 73
           N+PS
Sbjct: 200 NVPS 203


>gi|34328055|ref|NP_035169.1| paired box protein Pax-7 [Mus musculus]
 gi|52788256|sp|P47239.2|PAX7_MOUSE RecName: Full=Paired box protein Pax-7
 gi|20522260|gb|AAG16663.3|AF254422_1 paired box transcription factor PAX7 [Mus musculus]
 gi|162318458|gb|AAI56073.1| Paired box gene 7 [synthetic construct]
 gi|162319578|gb|AAI56885.1| Paired box gene 7 [synthetic construct]
          Length = 503

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|47229844|emb|CAG07040.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 591

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|426241744|ref|XP_004014749.1| PREDICTED: paired box protein Pax-1 [Ovis aries]
          Length = 544

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 246 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 305

Query: 70  NIPS 73
           N+PS
Sbjct: 306 NVPS 309


>gi|402883361|ref|XP_003905188.1| PREDICTED: paired box protein Pax-1 [Papio anubis]
          Length = 457

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 150 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 209

Query: 70  NIPS 73
           N+PS
Sbjct: 210 NVPS 213


>gi|440911588|gb|ELR61237.1| Paired box protein Pax-1, partial [Bos grunniens mutus]
          Length = 357

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|354468132|ref|XP_003496521.1| PREDICTED: paired box protein Pax-1-like [Cricetulus griseus]
          Length = 460

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 158 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 217

Query: 70  NIPS 73
           N+PS
Sbjct: 218 NVPS 221


>gi|195114566|ref|XP_002001838.1| GI14821 [Drosophila mojavensis]
 gi|193912413|gb|EDW11280.1| GI14821 [Drosophila mojavensis]
          Length = 617

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ S+I  YKR  P +F+WEIR++L++EG C   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIESRIEEYKRTNPGMFSWEIREKLIREGFCDRS 138

Query: 70  NIPS 73
            +PS
Sbjct: 139 MVPS 142


>gi|296327247|tpg|DAA12512.1| TPA_inf: Pax-beta paired domain protein [Lottia gigantea]
          Length = 128

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY +TGSI P  IGGSKP+V T +VVS++  YK E P +FAWEIR +L+Q+G+C+  
Sbjct: 53  ILNRYRKTGSINPGQIGGSKPKVTTPDVVSRVRQYKIENPQMFAWEIRQKLIQDGICTEK 112

Query: 70  NIPS 73
           NIPS
Sbjct: 113 NIPS 116


>gi|351711816|gb|EHB14735.1| Paired box protein Pax-7 [Heterocephalus glaber]
          Length = 457

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 73  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 132

Query: 72  PS 73
           PS
Sbjct: 133 PS 134


>gi|348518373|ref|XP_003446706.1| PREDICTED: paired box protein Pax-1-like [Oreochromis niloticus]
          Length = 412

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 114 ILARYNETGSILPGAIGGSKPRVTTPAVVKSIRDYKQGDPGIFAWEIRDRLLSDGVCDKY 173

Query: 70  NIPS 73
           N+PS
Sbjct: 174 NVPS 177


>gi|602343|emb|CAA84513.1| PAX7 paired box containing transcription factor [Homo sapiens]
          Length = 467

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|86355081|dbj|BAE78775.1| paired box containing Pax7 [Pelodiscus sinensis]
          Length = 436

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13 RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
          RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 23 RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 82

Query: 72 PS 73
          PS
Sbjct: 83 PS 84


>gi|297481580|ref|XP_002692205.1| PREDICTED: paired box protein Pax-1 [Bos taurus]
 gi|296481426|tpg|DAA23541.1| TPA: paired box 1-like [Bos taurus]
          Length = 500

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 141 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 200

Query: 70  NIPS 73
           N+PS
Sbjct: 201 NVPS 204


>gi|300795246|ref|NP_001178913.1| paired box protein Pax-7 [Rattus norvegicus]
          Length = 503

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|345495879|ref|XP_003427588.1| PREDICTED: paired box protein Pax-1-like [Nasonia vitripennis]
          Length = 280

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV  I   K + P IFAWEIRDRLL +GVC   
Sbjct: 87  ILARYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKHKDPGIFAWEIRDRLLSDGVCDKY 146

Query: 70  NIPS 73
           N+PS
Sbjct: 147 NVPS 150


>gi|119615262|gb|EAW94856.1| paired box gene 7, isoform CRA_d [Homo sapiens]
 gi|410341457|gb|JAA39675.1| paired box 7 [Pan troglodytes]
 gi|410341461|gb|JAA39677.1| paired box 7 [Pan troglodytes]
          Length = 503

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|344239283|gb|EGV95386.1| Paired box protein Pax-1 [Cricetulus griseus]
          Length = 378

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 76  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 135

Query: 70  NIPS 73
           N+PS
Sbjct: 136 NVPS 139


>gi|410954451|ref|XP_003983878.1| PREDICTED: paired box protein Pax-1 [Felis catus]
          Length = 446

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 139 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 198

Query: 70  NIPS 73
           N+PS
Sbjct: 199 NVPS 202


>gi|345789851|ref|XP_542866.3| PREDICTED: paired box protein Pax-1 [Canis lupus familiaris]
          Length = 448

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 141 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 200

Query: 70  NIPS 73
           N+PS
Sbjct: 201 NVPS 204


>gi|348534162|ref|XP_003454572.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
           niloticus]
          Length = 502

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|260178655|gb|ACX34050.1| paired box transcription factor 7 isoform 1 [Maylandia sp. 'Kompakt
           Mbamba Bay']
          Length = 502

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|440909271|gb|ELR59195.1| Paired box protein Pax-9, partial [Bos grunniens mutus]
          Length = 335

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 51/83 (61%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 55  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 114

Query: 70  NIPSRECPSIFAWEIRDRLLQEG 92
           N+PS    S         L Q+G
Sbjct: 115 NVPSVSSISRILRNKIGNLAQQG 137


>gi|291388944|ref|XP_002711030.1| PREDICTED: paired box 9 [Oryctolagus cuniculus]
          Length = 391

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 87  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 146

Query: 70  NIPS 73
           N+PS
Sbjct: 147 NVPS 150


>gi|26330346|dbj|BAC28903.1| unnamed protein product [Mus musculus]
          Length = 342

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKNIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|71727383|gb|AAZ39853.1| paired box 9, partial [Eulemur albifrons]
          Length = 196

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 51/83 (61%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 54  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 113

Query: 70  NIPSRECPSIFAWEIRDRLLQEG 92
           N+PS    S         L Q+G
Sbjct: 114 NVPSVSSISRILRNKIGNLAQQG 136


>gi|334312720|ref|XP_001382098.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1-like
           [Monodelphis domestica]
          Length = 455

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 149 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 208

Query: 70  NIPS 73
           N+PS
Sbjct: 209 NVPS 212


>gi|444728104|gb|ELW68568.1| Paired box protein Pax-7 [Tupaia chinensis]
          Length = 486

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 72  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 131

Query: 72  PS 73
           PS
Sbjct: 132 PS 133


>gi|193800|gb|AAA37793.1| Pax 1 protein precursor, partial [Mus musculus]
          Length = 140

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 63  MLARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 122

Query: 70  NIPS 73
           N+PS
Sbjct: 123 NVPS 126


>gi|45384216|ref|NP_990396.1| paired box protein Pax-7 [Gallus gallus]
 gi|2576239|dbj|BAA23005.1| PAX7 protein [Gallus gallus]
          Length = 524

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|355744963|gb|EHH49588.1| hypothetical protein EGM_00276, partial [Macaca fascicularis]
          Length = 516

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 85  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 144

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 145 PSGLVSSI 152


>gi|355693229|gb|EHH27832.1| hypothetical protein EGK_18127 [Macaca mulatta]
          Length = 371

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 85  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 144

Query: 70  NIPS 73
           N+PS
Sbjct: 145 NVPS 148


>gi|297694955|ref|XP_002824736.1| PREDICTED: paired box protein Pax-9 [Pongo abelii]
          Length = 341

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|1352718|sp|P47236.1|PAX1_CHICK RecName: Full=Paired box protein Pax-1
 gi|773403|gb|AAA65058.1| Pax-1, partial [Gallus gallus]
          Length = 203

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 55  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 114

Query: 70  NIPS 73
           N+PS
Sbjct: 115 NVPS 118


>gi|1709593|sp|P55166.1|PAX9_CHICK RecName: Full=Paired box protein Pax-9
 gi|1359591|emb|CAA63343.1| ChPax9 [Gallus gallus]
          Length = 339

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 54  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 113

Query: 70  NIPS 73
           N+PS
Sbjct: 114 NVPS 117


>gi|190339194|gb|AAI63580.1| Pax7a protein [Danio rerio]
          Length = 275

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|441678373|ref|XP_003282443.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-9, partial
           [Nomascus leucogenys]
          Length = 354

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 51/83 (61%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 69  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 128

Query: 70  NIPSRECPSIFAWEIRDRLLQEG 92
           N+PS    S         L Q+G
Sbjct: 129 NVPSVSSISRILRNKIGNLAQQG 151


>gi|2605901|gb|AAB84199.1| paired box homeotic protein 9 [Ateles belzebuth chamek]
          Length = 109

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 51/83 (61%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 23  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 82

Query: 70  NIPSRECPSIFAWEIRDRLLQEG 92
           N+PS    S         L Q+G
Sbjct: 83  NVPSVSSISRILRNKIGNLAQQG 105


>gi|1854514|emb|CAA63436.1| Pax9 [Homo sapiens]
          Length = 331

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 48  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 107

Query: 70  NIPS 73
           N+PS
Sbjct: 108 NVPS 111


>gi|395838199|ref|XP_003792006.1| PREDICTED: paired box protein Pax-9 [Otolemur garnettii]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|195160032|ref|XP_002020880.1| GL14130 [Drosophila persimilis]
 gi|194117830|gb|EDW39873.1| GL14130 [Drosophila persimilis]
          Length = 601

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EG+C   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEDYKRTNPGMFSWEIREKLIREGICDRS 138

Query: 70  NIPS 73
             PS
Sbjct: 139 TAPS 142


>gi|94404551|gb|ABF17938.1| Pax7 variant [Gallus gallus]
          Length = 502

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|22535488|dbj|BAC10688.1| Pax1 [Mus musculus]
          Length = 212

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|18859213|ref|NP_571373.1| paired box protein Pax-9 [Danio rerio]
 gi|1648962|gb|AAC60034.1| Pax9a [Danio rerio]
          Length = 343

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NLPS 119


>gi|46575641|gb|AAH69134.1| Paired box 1 [Homo sapiens]
          Length = 440

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|388240436|dbj|BAM15712.1| paired box gene 9 [Scyliorhinus torazame]
          Length = 346

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRAYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|51988872|gb|AAU21037.1| paired box gene 1 [Homo sapiens]
          Length = 438

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 54  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 113

Query: 70  NIPS 73
           N+PS
Sbjct: 114 NVPS 117


>gi|402875985|ref|XP_003901767.1| PREDICTED: paired box protein Pax-9 [Papio anubis]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|281339380|gb|EFB14964.1| hypothetical protein PANDA_012250 [Ailuropoda melanoleuca]
          Length = 466

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 62  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 121

Query: 70  NIPS 73
           N+PS
Sbjct: 122 NVPS 125


>gi|395504281|ref|XP_003756484.1| PREDICTED: paired box protein Pax-9-like [Sarcophilus harrisii]
          Length = 353

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 68  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 127

Query: 70  NIPS 73
           N+PS
Sbjct: 128 NVPS 131


>gi|148704759|gb|EDL36706.1| paired box gene 9, isoform CRA_a [Mus musculus]
          Length = 364

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 78  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 137

Query: 70  NIPS 73
           N+PS
Sbjct: 138 NVPS 141


>gi|431907339|gb|ELK11312.1| Paired box protein Pax-9 [Pteropus alecto]
          Length = 401

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 115 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 174

Query: 70  NIPS 73
           N+PS
Sbjct: 175 NVPS 178


>gi|88922927|sp|Q2VL50.1|PAX9_PROVC RecName: Full=Paired box protein Pax-9
 gi|71727448|gb|AAZ39866.1| paired box 9 [Propithecus coquereli]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|88922929|sp|Q2VL60.1|PAX9_SAIBB RecName: Full=Paired box protein Pax-9
 gi|71727398|gb|AAZ39856.1| paired box 9 [Saimiri boliviensis]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|296214837|ref|XP_002753875.1| PREDICTED: paired box protein Pax-9 [Callithrix jacchus]
 gi|88922919|sp|Q2VL58.1|PAX9_CALJA RecName: Full=Paired box protein Pax-9
 gi|71727408|gb|AAZ39858.1| paired box 9 [Callithrix jacchus]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|88922918|sp|Q2VL59.1|PAX9_CALGO RecName: Full=Paired box protein Pax-9
 gi|71727403|gb|AAZ39857.1| paired box 9 [Callimico goeldii]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|327315348|ref|NP_001035507.1| paired box protein Pax-9 [Macaca mulatta]
 gi|88922924|sp|Q2VL61.1|PAX9_MACMU RecName: Full=Paired box protein Pax-9
 gi|71727393|gb|AAZ39855.1| paired box 9 [Macaca mulatta]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|88922920|sp|Q2VL53.1|PAX9_DAUMA RecName: Full=Paired box protein Pax-9
 gi|88922921|sp|Q2VL52.1|PAX9_LEMCA RecName: Full=Paired box protein Pax-9
 gi|88922923|sp|Q2VL51.1|PAX9_LEPED RecName: Full=Paired box protein Pax-9
 gi|71727433|gb|AAZ39863.1| paired box 9 [Daubentonia madagascariensis]
 gi|71727438|gb|AAZ39864.1| paired box 9 [Lemur catta]
 gi|71727443|gb|AAZ39865.1| paired box 9 [Lepilemur edwardsi]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|88014534|ref|NP_001034628.1| paired box protein Pax-9 [Rattus norvegicus]
 gi|109892814|sp|Q2L4T2.1|PAX9_RAT RecName: Full=Paired box protein Pax-9
 gi|87080654|dbj|BAE79272.1| paired box protein 9 [Rattus norvegicus]
 gi|149051272|gb|EDM03445.1| rCG62149 [Rattus norvegicus]
          Length = 342

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|410962066|ref|XP_003987596.1| PREDICTED: paired box protein Pax-9 [Felis catus]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|403263912|ref|XP_003924243.1| PREDICTED: paired box protein Pax-9 [Saimiri boliviensis
           boliviensis]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|351712895|gb|EHB15814.1| Paired box protein Pax-9 [Heterocephalus glaber]
          Length = 383

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|348572327|ref|XP_003471944.1| PREDICTED: paired box protein Pax-9-like [Cavia porcellus]
          Length = 425

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 109 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 168

Query: 70  NIPS 73
           N+PS
Sbjct: 169 NVPS 172


>gi|345803917|ref|XP_547776.3| PREDICTED: paired box protein Pax-9 [Canis lupus familiaris]
          Length = 524

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 238 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 297

Query: 70  NIPS 73
           N+PS
Sbjct: 298 NVPS 301


>gi|301780168|ref|XP_002925501.1| PREDICTED: paired box protein Pax-9-like [Ailuropoda melanoleuca]
          Length = 457

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 171 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 230

Query: 70  NIPS 73
           N+PS
Sbjct: 231 NVPS 234


>gi|32546|emb|CAA33146.1| unnamed protein product [Homo sapiens]
          Length = 212

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 126 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 185

Query: 70  NIPS 73
           N+PS
Sbjct: 186 NVPS 189


>gi|88922922|sp|Q2VL57.1|PAX9_LEORO RecName: Full=Paired box protein Pax-9
 gi|71727413|gb|AAZ39859.1| paired box 9 [Leontopithecus rosalia]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|71727423|gb|AAZ39861.1| paired box 9, partial [Tarsius syrichta]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|417399256|gb|JAA46653.1| Putative transcription factor pax1/9 [Desmodus rotundus]
          Length = 342

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|395752004|ref|XP_003780399.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1 [Pongo
           abelii]
          Length = 510

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 126 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 185

Query: 70  NIPS 73
           N+PS
Sbjct: 186 NVPS 189


>gi|91087217|ref|XP_975478.1| PREDICTED: similar to Pax-1 protein [Tribolium castaneum]
          Length = 251

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K++ P IFAWEIRDRLL +G+C   
Sbjct: 61  ILARYHETGSILPGAIGGSKPRVTTPKVVAYIKDLKQKDPGIFAWEIRDRLLSDGICDKY 120

Query: 70  NIPS 73
           N+PS
Sbjct: 121 NVPS 124


>gi|426222842|ref|XP_004005591.1| PREDICTED: paired box protein Pax-7 [Ovis aries]
          Length = 805

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 397 RYQETGSIRPGAIGGSKPRQVATPDVEKKIEDYKRENPGMFSWEIRDRLLKDGHCDRSTV 456

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 457 PSGLVSSI 464


>gi|355563404|gb|EHH19966.1| HuP48, partial [Macaca mulatta]
          Length = 447

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 65  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 124

Query: 70  NIPS 73
           N+PS
Sbjct: 125 NVPS 128


>gi|270010988|gb|EFA07436.1| pox meso [Tribolium castaneum]
          Length = 280

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV+ I   K++ P IFAWEIRDRLL +G+C   
Sbjct: 90  ILARYHETGSILPGAIGGSKPRVTTPKVVAYIKDLKQKDPGIFAWEIRDRLLSDGICDKY 149

Query: 70  NIPS 73
           N+PS
Sbjct: 150 NVPS 153


>gi|88922928|sp|Q2VL56.1|PAX9_SAGOE RecName: Full=Paired box protein Pax-9
 gi|71727418|gb|AAZ39860.1| paired box 9 [Saguinus oedipus]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|88922926|sp|Q2VL54.1|PAX9_PERPO RecName: Full=Paired box protein Pax-9
 gi|71727428|gb|AAZ39862.1| paired box 9 [Perodicticus potto]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|6754992|ref|NP_035171.1| paired box protein Pax-9 [Mus musculus]
 gi|1352722|sp|P47242.1|PAX9_MOUSE RecName: Full=Paired box protein Pax-9
 gi|886893|emb|CAA58824.1| transcription factor [Mus musculus]
 gi|13543255|gb|AAH05794.1| Paired box gene 9 [Mus musculus]
 gi|74208760|dbj|BAE21149.1| unnamed protein product [Mus musculus]
          Length = 342

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|354499966|ref|XP_003512074.1| PREDICTED: paired box protein Pax-9 [Cricetulus griseus]
          Length = 342

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|334328499|ref|XP_001376208.2| PREDICTED: hypothetical protein LOC100025188 [Monodelphis
           domestica]
          Length = 489

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|189069355|dbj|BAG36387.1| unnamed protein product [Homo sapiens]
          Length = 341

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|410897669|ref|XP_003962321.1| PREDICTED: paired box protein Pax-9-like [Takifugu rubripes]
          Length = 393

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 118 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 177

Query: 70  NIPS 73
           N+PS
Sbjct: 178 NLPS 181


>gi|344253603|gb|EGW09707.1| Paired box protein Pax-9 [Cricetulus griseus]
          Length = 316

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|11181941|emb|CAC16141.1| Pax-9 [Gallus gallus]
          Length = 208

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 54  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 113

Query: 70  NIPS 73
           N+PS
Sbjct: 114 NVPS 117


>gi|197276661|ref|NP_006183.2| paired box protein Pax-1 isoform 1 [Homo sapiens]
 gi|296439493|sp|P15863.4|PAX1_HUMAN RecName: Full=Paired box protein Pax-1; AltName: Full=HuP48
          Length = 534

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 150 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 209

Query: 70  NIPS 73
           N+PS
Sbjct: 210 NVPS 213


>gi|355784744|gb|EHH65595.1| HuP48, partial [Macaca fascicularis]
          Length = 447

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 65  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 124

Query: 70  NIPS 73
           N+PS
Sbjct: 125 NVPS 128


>gi|115938112|ref|XP_800234.2| PREDICTED: paired box protein Pax-9-like [Strongylocentrotus
           purpuratus]
          Length = 437

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 52/64 (81%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+ ETGSI P AIGGSKPRV+T  VV++I+ YK+E  S+FAWEIR+RLL +G+CS +
Sbjct: 57  ILSRFAETGSILPGAIGGSKPRVSTPAVVNRIAQYKQENSSMFAWEIRERLLLDGICSKE 116

Query: 70  NIPS 73
            +PS
Sbjct: 117 TLPS 120


>gi|300797877|ref|NP_001179298.1| paired box protein Pax-9 [Bos taurus]
 gi|296475371|tpg|DAA17486.1| TPA: paired box 9-like [Bos taurus]
          Length = 342

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|301775469|ref|XP_002923155.1| PREDICTED: paired box protein Pax-1-like [Ailuropoda melanoleuca]
          Length = 474

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 83  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 142

Query: 70  NIPS 73
           N+PS
Sbjct: 143 NVPS 146


>gi|405974968|gb|EKC39574.1| Paired box protein Pax-9 [Crassostrea gigas]
          Length = 281

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 45/64 (70%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK   P IFAWEIRD+LL +GVC   
Sbjct: 63  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIKMYKERDPGIFAWEIRDKLLADGVCDKY 122

Query: 70  NIPS 73
           N+PS
Sbjct: 123 NVPS 126


>gi|259013402|ref|NP_001158408.1| paired box transcription factor pax1/9 [Saccoglossus kowalevskii]
 gi|113196536|gb|ABI31622.1| paired box transcription factor pax1/9 [Saccoglossus kowalevskii]
          Length = 383

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 45/64 (70%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YKR  P IFAWEIRDRL+ + VC   
Sbjct: 60  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIKEYKRMDPGIFAWEIRDRLIADNVCDKY 119

Query: 70  NIPS 73
           N+PS
Sbjct: 120 NVPS 123


>gi|47221230|emb|CAG13166.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 490

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 184 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 243

Query: 70  NIPS 73
           N+PS
Sbjct: 244 NLPS 247


>gi|328778292|ref|XP_394847.4| PREDICTED: protein gooseberry-like [Apis mellifera]
          Length = 426

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I   KR+ P IF+WEIR++L+++G+C   
Sbjct: 93  ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEDMKRQNPGIFSWEIREKLIKDGICDKA 152

Query: 70  NIPS 73
           + PS
Sbjct: 153 SAPS 156


>gi|158053030|dbj|BAF81894.1| paired box protein 9 [Suncus murinus]
          Length = 377

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 91  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 150

Query: 70  NIPS 73
           N+PS
Sbjct: 151 NVPS 154


>gi|114681249|ref|XP_514547.2| PREDICTED: paired box protein Pax-1 [Pan troglodytes]
          Length = 534

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 150 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 209

Query: 70  NIPS 73
           N+PS
Sbjct: 210 NVPS 213


>gi|195442996|ref|XP_002069225.1| GK21081 [Drosophila willistoni]
 gi|194165310|gb|EDW80211.1| GK21081 [Drosophila willistoni]
          Length = 614

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EG+C   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRNHPGMFSWEIREKLIREGICDRS 138

Query: 70  NIPS 73
             PS
Sbjct: 139 TAPS 142


>gi|47200825|emb|CAF88233.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 199

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 117 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 176

Query: 70  NIPS 73
           N+PS
Sbjct: 177 NLPS 180


>gi|4505619|ref|NP_002575.1| paired box protein Pax-7 isoform 1 [Homo sapiens]
 gi|8247951|sp|P23759.3|PAX7_HUMAN RecName: Full=Paired box protein Pax-7; AltName: Full=HuP1
 gi|2570015|emb|CAA65522.1| PAX7 [Homo sapiens]
 gi|2570021|emb|CAA65520.1| paired box containing transcription factor [Homo sapiens]
 gi|119615261|gb|EAW94855.1| paired box gene 7, isoform CRA_c [Homo sapiens]
          Length = 520

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PSRECPSI 79
           PS    SI
Sbjct: 149 PSGLVSSI 156


>gi|397478703|ref|XP_003810679.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1 [Pan
           paniscus]
          Length = 534

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 150 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 209

Query: 70  NIPS 73
           N+PS
Sbjct: 210 NVPS 213


>gi|338747569|dbj|BAK41862.1| paired box protein [Eptatretus burgeri]
          Length = 365

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV+ I  YK+  P IFAWEIRD+LL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVNHIREYKQRDPGIFAWEIRDKLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|281333979|gb|ADA61179.1| paired box 7 [Meleagris gallopavo]
          Length = 520

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|426248838|ref|XP_004018165.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-9 [Ovis
           aries]
          Length = 669

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 385 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 444

Query: 70  NIPS 73
           N+PS
Sbjct: 445 NVPS 448


>gi|395851971|ref|XP_003798520.1| PREDICTED: paired box protein Pax-1 [Otolemur garnettii]
          Length = 453

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 146 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 205

Query: 70  NIPS 73
           N+PS
Sbjct: 206 NVPS 209


>gi|281338832|gb|EFB14416.1| hypothetical protein PANDA_015018 [Ailuropoda melanoleuca]
          Length = 341

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 55  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 114

Query: 70  NIPS 73
           N+PS
Sbjct: 115 NVPS 118


>gi|395528443|ref|XP_003766339.1| PREDICTED: paired box protein Pax-7 [Sarcophilus harrisii]
          Length = 637

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 223 RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 282

Query: 72  PS 73
           PS
Sbjct: 283 PS 284


>gi|198475763|ref|XP_001357148.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
 gi|198137948|gb|EAL34215.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
          Length = 646

 Score = 84.0 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EG+C   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEDYKRTNPGMFSWEIREKLIREGICDRS 138

Query: 70  NIPS 73
             PS
Sbjct: 139 TAPS 142


>gi|350594704|ref|XP_003483955.1| PREDICTED: paired box protein Pax-1 [Sus scrofa]
          Length = 467

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 146 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 205

Query: 70  NIPS 73
           N+PS
Sbjct: 206 NVPS 209


>gi|148704760|gb|EDL36707.1| paired box gene 9, isoform CRA_b [Mus musculus]
          Length = 394

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 108 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 167

Query: 70  NIPS 73
           N+PS
Sbjct: 168 NVPS 171


>gi|441640903|ref|XP_004090329.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1 [Nomascus
           leucogenys]
          Length = 545

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 150 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 209

Query: 70  NIPS 73
           N+PS
Sbjct: 210 NVPS 213


>gi|196010814|ref|XP_002115271.1| hypothetical protein TRIADDRAFT_29410 [Trichoplax adhaerens]
 gi|190582042|gb|EDV22116.1| hypothetical protein TRIADDRAFT_29410 [Trichoplax adhaerens]
          Length = 400

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 4/68 (5%)

Query: 6   LLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGV 65
           +LC    RYY+TGS+ P  IGGSKP+VAT  VV KI+ YKR   +IFAWEIR++LL + +
Sbjct: 67  ILC----RYYQTGSVSPGIIGGSKPKVATPTVVDKIAEYKRNNSTIFAWEIREKLLGDKI 122

Query: 66  CSNDNIPS 73
           C   N+PS
Sbjct: 123 CDASNVPS 130


>gi|1127245|pdb|1PDN|C Chain C, Crystal Structure Of A Paired Domain-Dna Complex At 2.5
           Angstroms Resolution Reveals Structural Basis For Pax
           Developmental Mutations
          Length = 128

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EGVC   
Sbjct: 53  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRS 112

Query: 70  NIPS 73
             PS
Sbjct: 113 TAPS 116


>gi|41615361|gb|AAS09957.1| Pax7 transcription factor, partial [Ambystoma mexicanum]
          Length = 375

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 92  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 151

Query: 72  PS 73
           PS
Sbjct: 152 PS 153


>gi|395507769|ref|XP_003758193.1| PREDICTED: paired box protein Pax-1-like [Sarcophilus harrisii]
          Length = 387

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 81  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 140

Query: 70  NIPS 73
           N+PS
Sbjct: 141 NVPS 144


>gi|380036026|ref|NP_001244025.1| paired box protein Pax-1 isoform 2 [Homo sapiens]
          Length = 457

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 150 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 209

Query: 70  NIPS 73
           N+PS
Sbjct: 210 NVPS 213


>gi|197276660|ref|NP_032806.2| paired box protein Pax-1 [Mus musculus]
 gi|296439494|sp|P09084.4|PAX1_MOUSE RecName: Full=Paired box protein Pax-1
          Length = 446

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 141 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 200

Query: 70  NIPS 73
           N+PS
Sbjct: 201 NVPS 204


>gi|1195494|gb|AAB35064.1| Pax-1 product=sclerotome development regulator/DNA-binding
           transcriptional activator [Coturnix coturnix=Japanese
           quails, ssp. japonica, Peptide, 353 aa]
          Length = 353

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|380029723|ref|XP_003698515.1| PREDICTED: uncharacterized protein LOC100870845 [Apis florea]
          Length = 426

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV  I   K + P IFAWEIRDRLL +GVC   
Sbjct: 89  ILARYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKY 148

Query: 70  NIPS 73
           N+PS
Sbjct: 149 NVPS 152


>gi|165881968|gb|ABY71250.1| Pax1/9b [Petromyzon marinus]
          Length = 323

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 116 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQRDPGIFAWEIRDRLLADGVCDKY 175

Query: 70  NIPS 73
           N+PS
Sbjct: 176 NVPS 179


>gi|194038753|ref|XP_001925237.1| PREDICTED: paired box protein Pax-9-like [Sus scrofa]
          Length = 341

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|321462349|gb|EFX73373.1| hypothetical protein DAPPUDRAFT_307722 [Daphnia pulex]
          Length = 160

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV  I   K + P IFAWEIRDRLL +G+C   
Sbjct: 60  ILARYHETGSILPGAIGGSKPRVTTPKVVGYIKELKSKDPGIFAWEIRDRLLADGICDKY 119

Query: 70  NIPS 73
           N+PS
Sbjct: 120 NVPS 123


>gi|432119746|gb|ELK38626.1| Paired box protein Pax-9 [Myotis davidii]
          Length = 390

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 68  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 127

Query: 70  NIPS 73
           N+PS
Sbjct: 128 NVPS 131


>gi|18859207|ref|NP_571352.1| paired box protein Pax-3 [Danio rerio]
 gi|2909765|gb|AAC41253.1| transcription factor PAX3 [Danio rerio]
          Length = 509

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPRVATA-EVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKP+ +T  +V  KI  YKRE P +F+WEIRD+LL++G+C  +N+
Sbjct: 89  RYQETGSIRPGAIGGSKPKQSTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDGICDRNNV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|291403754|ref|XP_002718002.1| PREDICTED: paired box 9 [Oryctolagus cuniculus]
          Length = 427

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 140 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 199

Query: 70  NIPS 73
           N+PS
Sbjct: 200 NVPS 203


>gi|410048181|ref|XP_001143345.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-9 isoform 4
           [Pan troglodytes]
          Length = 408

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 123 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 182

Query: 70  NIPS 73
           N+PS
Sbjct: 183 NVPS 186


>gi|49903856|gb|AAH76069.1| Pax3a protein [Danio rerio]
          Length = 445

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPRVATA-EVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKP+ +T  +V  KI  YKRE P +F+WEIRD+LL++G+C  +N+
Sbjct: 89  RYQETGSIRPGAIGGSKPKQSTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDGICDRNNV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|53125994|emb|CAG25716.1| paired box protein 7 [Salvelinus alpinus]
          Length = 514

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PS 73
           PS
Sbjct: 162 PS 163


>gi|403283766|ref|XP_003933276.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1 [Saimiri
           boliviensis boliviensis]
          Length = 539

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 163 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 222

Query: 70  NIPS 73
           N+PS
Sbjct: 223 NVPS 226


>gi|363731254|ref|XP_003640945.1| PREDICTED: paired box protein Pax-1-like [Gallus gallus]
          Length = 419

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 122 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 181

Query: 70  NIPS 73
           N+PS
Sbjct: 182 NVPS 185


>gi|449274775|gb|EMC83853.1| Paired box protein Pax-9, partial [Columba livia]
          Length = 345

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 55  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 114

Query: 70  NIPS 73
           N+PS
Sbjct: 115 NVPS 118


>gi|359682153|gb|AEV53628.1| paired box protein 7 [Sparus aurata]
          Length = 502

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKR+ P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRDNPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|449682944|ref|XP_002159617.2| PREDICTED: uncharacterized protein LOC100192231 [Hydra
           magnipapillata]
 gi|89242120|dbj|BAA36345.2| Pax-2/5/8 [Hydra vulgaris]
          Length = 603

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/57 (61%), Positives = 46/57 (80%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           ++ R+YETGS+RP  IGGSKP+VAT  VV+KI  YK+  P++FAWEIRD+LL E +C
Sbjct: 136 ILSRFYETGSVRPGVIGGSKPKVATPSVVAKIQEYKQHNPTMFAWEIRDKLLSEQIC 192


>gi|326920760|ref|XP_003206636.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-9-like
           [Meleagris gallopavo]
          Length = 373

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 88  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 147

Query: 70  NIPS 73
           N+PS
Sbjct: 148 NVPS 151


>gi|1648964|gb|AAC60035.1| Pax9b [Danio rerio]
 gi|50369228|gb|AAH75867.1| Pax9 protein [Danio rerio]
          Length = 270

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NLPS 119


>gi|53125929|emb|CAG25521.1| paired box protein 7 [Salvelinus alpinus]
          Length = 510

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PS 73
           PS
Sbjct: 162 PS 163


>gi|242021507|ref|XP_002431186.1| Paired box protein Pax-1, putative [Pediculus humanus corporis]
 gi|212516435|gb|EEB18448.1| Paired box protein Pax-1, putative [Pediculus humanus corporis]
          Length = 306

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R++ETGSI P AIGGSKPRV T +VVS I   K++ P IFAWEIRDRLL +G+C   
Sbjct: 62  ILARFHETGSILPGAIGGSKPRVTTPKVVSYIKGLKQKDPGIFAWEIRDRLLSDGICDKY 121

Query: 70  NIPS 73
           N+PS
Sbjct: 122 NVPS 125


>gi|45382503|ref|NP_990243.1| paired box protein Pax-9 [Gallus gallus]
 gi|4104795|gb|AAD02167.1| paired box protein [Gallus gallus]
          Length = 342

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|295983611|gb|ADG63459.1| Pax-B [Crepidula fornicata]
          Length = 162

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 50/68 (73%), Gaps = 4/68 (5%)

Query: 6   LLCPLVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGV 65
           +LC    R+ ETGS +P  IGGSKP+VAT +VV  IS YK E P++FAWEIRD+L+ + V
Sbjct: 82  ILC----RFQETGSTKPGVIGGSKPKVATPQVVGAISRYKAENPTMFAWEIRDKLIADQV 137

Query: 66  CSNDNIPS 73
           CS DN PS
Sbjct: 138 CSPDNAPS 145


>gi|195386642|ref|XP_002052013.1| GJ23973 [Drosophila virilis]
 gi|194148470|gb|EDW64168.1| GJ23973 [Drosophila virilis]
          Length = 619

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L++EG C   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRTNPGMFSWEIREKLIREGFCDRS 138

Query: 70  NIPS 73
            +PS
Sbjct: 139 MVPS 142


>gi|328713660|ref|XP_001942974.2| PREDICTED: protein gooseberry-like [Acyrthosiphon pisum]
          Length = 440

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/65 (55%), Positives = 51/65 (78%), Gaps = 1/65 (1%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLL-QEGVCSN 68
           +++RY ETGSIRP  IGGSKPRVAT +V  +I  YK+  P++F+WEIRD+L+ Q+G+C  
Sbjct: 71  ILNRYQETGSIRPGVIGGSKPRVATPDVERRIEEYKKANPAMFSWEIRDKLVKQDGICDK 130

Query: 69  DNIPS 73
           ++ PS
Sbjct: 131 NSAPS 135


>gi|25992597|gb|AAN77177.1| Pax9 [Oreochromis niloticus]
          Length = 138

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
          ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 25 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 84

Query: 70 NIPS 73
          N+PS
Sbjct: 85 NLPS 88


>gi|348511099|ref|XP_003443082.1| PREDICTED: paired box protein Pax-9-like [Oreochromis niloticus]
          Length = 420

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 139 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 198

Query: 70  NIPS 73
           N+PS
Sbjct: 199 NLPS 202


>gi|381216186|gb|AFF61353.1| paired box protein 7 beta variant 3 [Oncorhynchus mykiss]
          Length = 514

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 102 RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 161

Query: 72  PS 73
           PS
Sbjct: 162 PS 163


>gi|195035409|ref|XP_001989170.1| GH10195 [Drosophila grimshawi]
 gi|193905170|gb|EDW04037.1| GH10195 [Drosophila grimshawi]
          Length = 636

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 48/64 (75%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPR+AT E+ ++I  YKR  P +F+WEIR++L+ EG C   
Sbjct: 79  ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRNNPGMFSWEIREKLIHEGFCDRS 138

Query: 70  NIPS 73
            +PS
Sbjct: 139 MVPS 142


>gi|149408755|ref|XP_001506813.1| PREDICTED: paired box protein Pax-1-like [Ornithorhynchus anatinus]
          Length = 395

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 89  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 148

Query: 70  NIPS 73
           N+PS
Sbjct: 149 NVPS 152


>gi|17541240|ref|NP_500513.1| Protein PAX-2 [Caenorhabditis elegans]
 gi|351062303|emb|CCD70278.1| Protein PAX-2 [Caenorhabditis elegans]
          Length = 351

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RYY TGS+RP  IGGSKP+VAT  VV  I+ YKR  P++FAWEIR +L+++ +C  +
Sbjct: 143 ILGRYYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIRQKLIEDQICGEE 202

Query: 70  NIPS 73
           N+PS
Sbjct: 203 NVPS 206


>gi|381216194|gb|AFF61357.1| paired box protein 7 beta variant 7 [Oncorhynchus mykiss]
          Length = 501

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|385251413|ref|NP_001245265.1| paired box gene 7b [Oncorhynchus mykiss]
 gi|381216192|gb|AFF61356.1| paired box protein 7 beta variant 6 [Oncorhynchus mykiss]
          Length = 497

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR V+T +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|21671145|dbj|BAC02582.1| Pax9 [Haplochromis brownae]
 gi|21671147|dbj|BAC02583.1| Pax9 [Labidochromis caeruleus]
 gi|21671149|dbj|BAC02584.1| Pax9 [Tropheus duboisi]
 gi|21671151|dbj|BAC02585.1| Pax9 [Astatoreochromis alluaudi]
          Length = 203

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 44  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 103

Query: 70  NIPS 73
           N+PS
Sbjct: 104 NLPS 107


>gi|260818045|ref|XP_002603895.1| hypothetical protein BRAFLDRAFT_241998 [Branchiostoma floridae]
 gi|229289219|gb|EEN59906.1| hypothetical protein BRAFLDRAFT_241998 [Branchiostoma floridae]
          Length = 134

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 51/64 (79%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETG++RP +IGGS+P+VAT  VV KI  YK E PS+FAWEIR+RLL + VC+  
Sbjct: 53  ILSRYFETGTVRPGSIGGSRPKVATPLVVRKILGYKLEKPSMFAWEIRERLLADRVCTEG 112

Query: 70  NIPS 73
           N+PS
Sbjct: 113 NLPS 116


>gi|426328067|ref|XP_004024824.1| PREDICTED: paired box protein Pax-7 isoform 1 [Gorilla gorilla
           gorilla]
          Length = 518

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|449504399|ref|XP_002199853.2| PREDICTED: uncharacterized protein LOC100220951 [Taeniopygia
           guttata]
          Length = 1136

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 247 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 306

Query: 70  NIPS 73
           N+PS
Sbjct: 307 NVPS 310


>gi|350420704|ref|XP_003492596.1| PREDICTED: protein gooseberry-like [Bombus impatiens]
          Length = 404

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I   KR+ P IF WEIR++L+++G+C   
Sbjct: 71  ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEDMKRQNPGIFTWEIREKLIKDGICDKA 130

Query: 70  NIPS 73
           + PS
Sbjct: 131 SAPS 134


>gi|326672012|ref|XP_003199570.1| PREDICTED: paired box protein Pax-7-like [Danio rerio]
          Length = 275

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRGTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|426391126|ref|XP_004061935.1| PREDICTED: paired box protein Pax-1 [Gorilla gorilla gorilla]
          Length = 457

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 150 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 209

Query: 70  NIPS 73
           N+PS
Sbjct: 210 NVPS 213


>gi|383852872|ref|XP_003701949.1| PREDICTED: protein gooseberry-neuro-like, partial [Megachile
           rotundata]
          Length = 398

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRVAT EV ++I   KR+ P IF+WEIR++L+++G+C   
Sbjct: 65  ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEDMKRQNPGIFSWEIREKLIKDGICDKA 124

Query: 70  NIPS 73
           + PS
Sbjct: 125 SAPS 128


>gi|332261023|ref|XP_003279579.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
           [Nomascus leucogenys]
          Length = 518

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|9652038|gb|AAF91372.1|AF260127_1 transcription factor Pax-B1 [Cladonema californicum]
          Length = 689

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGSIRP  IGGSKP+VAT  V+ KI+ YK + P++FAWEIR+ LL + +C  +
Sbjct: 118 ILGRFYETGSIRPGVIGGSKPKVATPSVIQKIAEYKTQNPTMFAWEIRECLLNDNICDAE 177

Query: 70  NIPS 73
           ++PS
Sbjct: 178 SVPS 181


>gi|9652040|gb|AAF91373.1|AF260128_1 transcription factor Pax-B [Cladonema californicum]
          Length = 686

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGSIRP  IGGSKP+VAT  V+ KI+ YK + P++FAWEIR+ LL + +C  +
Sbjct: 118 ILGRFYETGSIRPGVIGGSKPKVATPSVIQKIAEYKTQNPTMFAWEIRECLLNDNICDAE 177

Query: 70  NIPS 73
           ++PS
Sbjct: 178 SVPS 181


>gi|410919963|ref|XP_003973453.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
          Length = 198

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  +I  YKRE P +F+WEIRD+LL++GVC    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|254995977|dbj|BAH86770.1| paired-box transcription factor pax9 [Oryzias latipes]
          Length = 219

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NLPS 119


>gi|2102728|gb|AAB58291.1| Pax-B [Hydra littoralis]
          Length = 607

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/57 (61%), Positives = 46/57 (80%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVC 66
           ++ R+YETGS+RP  IGGSKP+VAT  VV+KI  YK+  P++FAWEIRD+LL E +C
Sbjct: 136 ILSRFYETGSVRPGVIGGSKPKVATPSVVAKIQEYKQHNPTMFAWEIRDKLLSEQIC 192


>gi|114554358|ref|XP_513156.2| PREDICTED: paired box protein Pax-7 isoform 2 [Pan troglodytes]
          Length = 518

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|7524359|ref|NP_039236.1| paired box protein Pax-7 isoform 2 [Homo sapiens]
 gi|2570014|emb|CAA65521.1| PAX7 [Homo sapiens]
 gi|111307751|gb|AAI21166.1| Paired box 7 [Homo sapiens]
 gi|111307754|gb|AAI21167.1| Paired box 7 [Homo sapiens]
 gi|119615259|gb|EAW94853.1| paired box gene 7, isoform CRA_a [Homo sapiens]
          Length = 518

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|110760215|ref|XP_001121954.1| PREDICTED: paired box protein Pax-1 [Apis mellifera]
          Length = 400

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV  I   K + P IFAWEIRDRLL +GVC   
Sbjct: 103 ILARYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKY 162

Query: 70  NIPS 73
           N+PS
Sbjct: 163 NVPS 166


>gi|395731076|ref|XP_003775838.1| PREDICTED: paired box protein Pax-7 isoform 2 [Pongo abelii]
          Length = 518

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 13  RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
           RY ETGSIRP AIGGSKPR VAT +V  KI  YKRE P +F+WEIRDRLL++G C    +
Sbjct: 89  RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148

Query: 72  PS 73
           PS
Sbjct: 149 PS 150


>gi|283365205|dbj|BAI66185.1| transcription factor Pax-B [Cladonema radiatum]
          Length = 714

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ R+YETGSIRP  IGGSKP+VAT  VV KI+ YK + P++FAWEIR+ L+   +C  +
Sbjct: 133 ILGRFYETGSIRPGVIGGSKPKVATPSVVQKIADYKAQNPTMFAWEIRECLINNNICDVE 192

Query: 70  NIPSRECPSIFAWEIRDRLLQEGVCSNDN 98
           ++PS    S     +R+R+   G  S DN
Sbjct: 193 SVPS---VSSINRIVRNRIGGGGKVSKDN 218


>gi|307167082|gb|EFN60871.1| Paired box protein Pax-9 [Camponotus floridanus]
          Length = 211

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV  I   K + P IFAWEIRDRLL +GVC   
Sbjct: 80  ILARYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKY 139

Query: 70  NIPS 73
           N+PS
Sbjct: 140 NVPS 143


>gi|149410397|ref|XP_001511262.1| PREDICTED: paired box protein Pax-9-like [Ornithorhynchus anatinus]
          Length = 349

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 66  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 125

Query: 70  NIPS 73
           N+PS
Sbjct: 126 NVPS 129


>gi|350400844|ref|XP_003485982.1| PREDICTED: hypothetical protein LOC100741090 [Bombus impatiens]
          Length = 405

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV  I   K + P IFAWEIRDRLL +GVC   
Sbjct: 97  ILARYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKY 156

Query: 70  NIPS 73
           N+PS
Sbjct: 157 NVPS 160


>gi|110748618|gb|ABG89862.1| Pax9 splice variant b [Astyanax mexicanus]
          Length = 270

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKF 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NLPS 119


>gi|340719313|ref|XP_003398099.1| PREDICTED: paired box protein Pax-1-like [Bombus terrestris]
          Length = 388

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV  I   K + P IFAWEIRDRLL +GVC   
Sbjct: 97  ILARYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKY 156

Query: 70  NIPS 73
           N+PS
Sbjct: 157 NVPS 160


>gi|165979105|gb|ABY76998.1| Pax1/9 [Petromyzon marinus]
          Length = 393

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/64 (60%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T   V+ I  YK+  P IFAWEIRD+LL +GVC   
Sbjct: 56  ILARYNETGSILPGAIGGSKPRVTTPNAVNHIRTYKQRDPGIFAWEIRDKLLADGVCDKY 115

Query: 70  NIPS 73
           N+PS
Sbjct: 116 NVPS 119


>gi|170040812|ref|XP_001848180.1| gooseberry [Culex quinquefasciatus]
 gi|167864427|gb|EDS27810.1| gooseberry [Culex quinquefasciatus]
          Length = 444

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 50/64 (78%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           +++RY ETGSIRP  IGGSKPRV+T E+ ++I   ++  P IF+WEIRD+L++EGVC  +
Sbjct: 59  ILNRYQETGSIRPGVIGGSKPRVSTPEIENRIEEMRKANPGIFSWEIRDKLIKEGVCDKN 118

Query: 70  NIPS 73
           + PS
Sbjct: 119 SAPS 122


>gi|194382456|dbj|BAG64398.1| unnamed protein product [Homo sapiens]
          Length = 433

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY ETGSI P AIGGSKPRV T  VV  I  YK+  P IFAWEIRDRLL +GVC   
Sbjct: 126 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 185

Query: 70  NIPS 73
           N+PS
Sbjct: 186 NVPS 189


>gi|307212050|gb|EFN87933.1| Protein gooseberry-neuro [Harpegnathos saltator]
          Length = 438

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 1/65 (1%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLL-QEGVCSN 68
           +++RY ETGSIRP  IGGSKPRVAT EV ++I   KR+ P IF+WEIRD+L+ Q+GVC  
Sbjct: 49  ILNRYQETGSIRPGVIGGSKPRVATPEVEARIEDLKRQNPGIFSWEIRDKLIKQDGVCDK 108

Query: 69  DNIPS 73
            + PS
Sbjct: 109 ASAPS 113


>gi|322797242|gb|EFZ19418.1| hypothetical protein SINV_09237 [Solenopsis invicta]
          Length = 210

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 47/64 (73%)

Query: 10  LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
           ++ RY+ETGSI P AIGGSKPRV T +VV  I   K + P IFAWEIRDRLL +GVC   
Sbjct: 75  ILARYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKY 134

Query: 70  NIPS 73
           N+PS
Sbjct: 135 NVPS 138


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.139    0.444 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,600,663,455
Number of Sequences: 23463169
Number of extensions: 55851397
Number of successful extensions: 104783
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 101645
Number of HSP's gapped (non-prelim): 2896
length of query: 100
length of database: 8,064,228,071
effective HSP length: 69
effective length of query: 31
effective length of database: 6,445,269,410
effective search space: 199803351710
effective search space used: 199803351710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)