BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4875
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O18381|PAX6_DROME Paired box protein Pax-6 OS=Drosophila melanogaster GN=ey PE=2 SV=3
Length = 857
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/64 (90%), Positives = 61/64 (95%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRPRAIGGSKPRVATAEVVSKIS YKRECPSIFAWEIRDRLLQE VC+ND
Sbjct: 108 ILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTND 167
Query: 70 NIPS 73
NIPS
Sbjct: 168 NIPS 171
>sp|P55864|PAX6_XENLA Paired box protein Pax-6 OS=Xenopus laevis GN=pax6 PE=2 SV=1
Length = 422
Score = 122 bits (305), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 61/64 (95%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+HYKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56 ILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTND 115
Query: 70 NIPS 73
NIPS
Sbjct: 116 NIPS 119
>sp|P63015|PAX6_MOUSE Paired box protein Pax-6 OS=Mus musculus GN=Pax6 PE=1 SV=1
Length = 422
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115
Query: 70 NIPS 73
NIPS
Sbjct: 116 NIPS 119
>sp|P26367|PAX6_HUMAN Paired box protein Pax-6 OS=Homo sapiens GN=PAX6 PE=1 SV=2
Length = 422
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115
Query: 70 NIPS 73
NIPS
Sbjct: 116 NIPS 119
>sp|Q1LZF1|PAX6_BOVIN Paired box protein Pax-6 OS=Bos taurus GN=PAX6 PE=2 SV=1
Length = 422
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115
Query: 70 NIPS 73
NIPS
Sbjct: 116 NIPS 119
>sp|P63016|PAX6_RAT Paired box protein Pax-6 OS=Rattus norvegicus GN=Pax6 PE=2 SV=1
Length = 422
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115
Query: 70 NIPS 73
NIPS
Sbjct: 116 NIPS 119
>sp|P47238|PAX6_COTJA Paired box protein Pax-6 OS=Coturnix coturnix japonica GN=PAX6 PE=2
SV=1
Length = 416
Score = 120 bits (301), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRPRAIGGSKPRVAT EVVSKI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 56 ILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTND 115
Query: 70 NIPS 73
NIPS
Sbjct: 116 NIPS 119
>sp|P26630|PAX6_DANRE Paired box protein Pax-6 OS=Danio rerio GN=pax6a PE=2 SV=1
Length = 437
Score = 119 bits (299), Expect = 4e-27, Method: Composition-based stats.
Identities = 55/64 (85%), Positives = 59/64 (92%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRPRAIGGSKPRVAT EVV KI+ YKRECPSIFAWEIRDRLL EGVC+ND
Sbjct: 75 ILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTND 134
Query: 70 NIPS 73
NIPS
Sbjct: 135 NIPS 138
>sp|O73917|PAX6_ORYLA Paired box protein Pax-6 OS=Oryzias latipes GN=pax6 PE=2 SV=1
Length = 437
Score = 119 bits (299), Expect = 4e-27, Method: Composition-based stats.
Identities = 54/64 (84%), Positives = 60/64 (93%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRPRAIGGSKPRVAT EVV+KI+ YKRECPSIFAWEIRDRLL EG+C+ND
Sbjct: 75 ILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTND 134
Query: 70 NIPS 73
NIPS
Sbjct: 135 NIPS 138
>sp|A0JMA6|PAX8_XENTR Paired box protein Pax-8 (Fragment) OS=Xenopus tropicalis GN=pax8
PE=2 SV=2
Length = 458
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRP IGGSKP+VAT +VV KI YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 70 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 129
Query: 70 NIPS 73
+PS
Sbjct: 130 TVPS 133
>sp|Q00288|PAX8_MOUSE Paired box protein Pax-8 OS=Mus musculus GN=Pax8 PE=2 SV=3
Length = 457
Score = 100 bits (250), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRP IGGSKP+VAT +VV KI YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
Query: 70 NIPS 73
+PS
Sbjct: 121 TVPS 124
>sp|P51974|PAX8_RAT Paired box protein Pax-8 OS=Rattus norvegicus GN=Pax8 PE=1 SV=2
Length = 457
Score = 100 bits (250), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRP IGGSKP+VAT +VV KI YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
Query: 70 NIPS 73
+PS
Sbjct: 121 TVPS 124
>sp|P47240|PAX8_CANFA Paired box protein Pax-8 OS=Canis familiaris GN=PAX8 PE=2 SV=1
Length = 459
Score = 100 bits (250), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRP IGGSKP+VAT +VV KI YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
Query: 70 NIPS 73
+PS
Sbjct: 121 TVPS 124
>sp|Q9PUK5|PAX8_XENLA Paired box protein Pax-8 OS=Xenopus laevis GN=pax8 PE=2 SV=1
Length = 465
Score = 100 bits (249), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRP IGGSKP+VAT +VV KI YKR+ P++FAWEIRDRLL +GVC ND
Sbjct: 78 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLTDGVCDND 137
Query: 70 NIPS 73
+PS
Sbjct: 138 TVPS 141
>sp|Q06710|PAX8_HUMAN Paired box protein Pax-8 OS=Homo sapiens GN=PAX8 PE=1 SV=2
Length = 450
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSIRP IGGSKP+VAT +VV KI YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
Query: 70 NIPS 73
+PS
Sbjct: 121 TVPS 124
>sp|Q5R9M8|PAX8_PONAB Paired box protein Pax-8 OS=Pongo abelii GN=PAX8 PE=2 SV=1
Length = 457
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/61 (73%), Positives = 51/61 (83%)
Query: 13 RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
RYYETGSIRP IGGSKP+VAT +VV KI YKR+ P++FAWEIRDRLL EGVC ND +P
Sbjct: 65 RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 124
Query: 73 S 73
S
Sbjct: 125 S 125
>sp|Q90268|PAX2A_DANRE Paired box protein Pax-2a OS=Danio rerio GN=pax2a PE=2 SV=2
Length = 410
Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSI+P IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EGVC ND
Sbjct: 71 ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDND 130
Query: 70 NIPS 73
+PS
Sbjct: 131 TVPS 134
>sp|Q02962|PAX2_HUMAN Paired box protein Pax-2 OS=Homo sapiens GN=PAX2 PE=1 SV=4
Length = 417
Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSI+P IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127
Query: 70 NIPS 73
+PS
Sbjct: 128 TVPS 131
>sp|P32114|PAX2_MOUSE Paired box protein Pax-2 OS=Mus musculus GN=Pax2 PE=1 SV=2
Length = 414
Score = 99.8 bits (247), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSI+P IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 126
Query: 70 NIPS 73
+PS
Sbjct: 127 TVPS 130
>sp|O57685|PAX2A_XENLA Paired box protein Pax-2-A OS=Xenopus laevis GN=pax2-a PE=2 SV=2
Length = 497
Score = 99.4 bits (246), Expect = 6e-21, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSI+P IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 68 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDND 127
Query: 70 NIPS 73
+PS
Sbjct: 128 TVPS 131
>sp|O57682|PAX2B_XENLA Paired box protein Pax-2-B OS=Xenopus laevis GN=pax2-b PE=2 SV=2
Length = 494
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSI+P IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL EG+C ND
Sbjct: 67 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDND 126
Query: 70 NIPS 73
+PS
Sbjct: 127 TVPS 130
>sp|Q9YH95|PAX5_XENLA Paired box protein Pax-5 OS=Xenopus laevis GN=pax5 PE=2 SV=1
Length = 388
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSI+P IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 67 ILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDND 126
Query: 70 NIPS 73
+PS
Sbjct: 127 TVPS 130
>sp|Q02650|PAX5_MOUSE Paired box protein Pax-5 OS=Mus musculus GN=Pax5 PE=1 SV=1
Length = 391
Score = 96.3 bits (238), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSI+P IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68 ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127
Query: 70 NIPS 73
+PS
Sbjct: 128 TVPS 131
>sp|Q02548|PAX5_HUMAN Paired box protein Pax-5 OS=Homo sapiens GN=PAX5 PE=1 SV=1
Length = 391
Score = 96.3 bits (238), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RYYETGSI+P IGGSKP+VAT +VV KI+ YKR+ P++FAWEIRDRLL E VC ND
Sbjct: 68 ILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDND 127
Query: 70 NIPS 73
+PS
Sbjct: 128 TVPS 131
>sp|Q0IH87|PAX3B_XENLA Paired box protein Pax-3-B OS=Xenopus laevis GN=pax3-b PE=2 SV=2
Length = 483
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 13 RYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNIP 72
RY ETGSIRP AIGGSKP+V T EV KI +KR+ P +F+WEIRD+LL++GVC + +P
Sbjct: 89 RYQETGSIRPGAIGGSKPKVTTPEVEKKIEEFKRDNPGMFSWEIRDKLLKDGVCDRNTVP 148
Query: 73 S 73
S
Sbjct: 149 S 149
>sp|P23757|POXM_DROME Paired box pox-meso protein OS=Drosophila melanogaster GN=Poxm PE=2
SV=3
Length = 370
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY+ETGSI P AIGGSKPRV T +VV+ I K+ P IFAWEIRDRLL EG+C
Sbjct: 61 ILARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKT 120
Query: 70 NIPS 73
N+PS
Sbjct: 121 NVPS 124
>sp|P06601|PRD_DROME Segmentation protein paired OS=Drosophila melanogaster GN=prd PE=1
SV=1
Length = 613
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 49/64 (76%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
+++RY ETGSIRP IGGSKPR+AT E+ ++I YKR P +F+WEIR++L++EGVC
Sbjct: 79 ILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRS 138
Query: 70 NIPS 73
PS
Sbjct: 139 TAPS 142
>sp|Q2VL62|PAX9_PANTR Paired box protein Pax-9 OS=Pan troglodytes GN=PAX9 PE=3 SV=1
Length = 341
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|P55771|PAX9_HUMAN Paired box protein Pax-9 OS=Homo sapiens GN=PAX9 PE=1 SV=3
Length = 341
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|P47239|PAX7_MOUSE Paired box protein Pax-7 OS=Mus musculus GN=Pax7 PE=2 SV=2
Length = 503
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 13 RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
RY ETGSIRP AIGGSKPR VAT +V KI YKRE P +F+WEIRDRLL++G C +
Sbjct: 89 RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148
Query: 72 PS 73
PS
Sbjct: 149 PS 150
>sp|P55166|PAX9_CHICK Paired box protein Pax-9 (Fragment) OS=Gallus gallus GN=PAX9 PE=2
SV=1
Length = 339
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 54 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 113
Query: 70 NIPS 73
N+PS
Sbjct: 114 NVPS 117
>sp|P47236|PAX1_CHICK Paired box protein Pax-1 (Fragment) OS=Gallus gallus GN=PAX1 PE=3
SV=1
Length = 203
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 55 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 114
Query: 70 NIPS 73
N+PS
Sbjct: 115 NVPS 118
>sp|Q2VL60|PAX9_SAIBB Paired box protein Pax-9 OS=Saimiri boliviensis boliviensis GN=PAX9
PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2L4T2|PAX9_RAT Paired box protein Pax-9 OS=Rattus norvegicus GN=Pax9 PE=2 SV=1
Length = 342
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL50|PAX9_PROCO Paired box protein Pax-9 OS=Propithecus coquereli GN=PAX9 PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL61|PAX9_MACMU Paired box protein Pax-9 OS=Macaca mulatta GN=PAX9 PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL51|PAX9_LEPED Paired box protein Pax-9 OS=Lepilemur edwardsi GN=PAX9 PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL52|PAX9_LEMCA Paired box protein Pax-9 OS=Lemur catta GN=PAX9 PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL53|PAX9_DAUMA Paired box protein Pax-9 OS=Daubentonia madagascariensis GN=PAX9
PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL58|PAX9_CALJA Paired box protein Pax-9 OS=Callithrix jacchus GN=PAX9 PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL59|PAX9_CALGO Paired box protein Pax-9 OS=Callimico goeldii GN=PAX9 PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL57|PAX9_LEORO Paired box protein Pax-9 OS=Leontopithecus rosalia GN=PAX9 PE=3
SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL56|PAX9_SAGOE Paired box protein Pax-9 OS=Saguinus oedipus GN=PAX9 PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|Q2VL54|PAX9_PERPO Paired box protein Pax-9 OS=Perodicticus potto edwarsi GN=PAX9 PE=3
SV=1
Length = 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|P47242|PAX9_MOUSE Paired box protein Pax-9 OS=Mus musculus GN=Pax9 PE=2 SV=1
Length = 342
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 56 ILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKY 115
Query: 70 NIPS 73
N+PS
Sbjct: 116 NVPS 119
>sp|P15863|PAX1_HUMAN Paired box protein Pax-1 OS=Homo sapiens GN=PAX1 PE=1 SV=4
Length = 534
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 150 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 209
Query: 70 NIPS 73
N+PS
Sbjct: 210 NVPS 213
>sp|P23759|PAX7_HUMAN Paired box protein Pax-7 OS=Homo sapiens GN=PAX7 PE=2 SV=3
Length = 520
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 13 RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
RY ETGSIRP AIGGSKPR VAT +V KI YKRE P +F+WEIRDRLL++G C +
Sbjct: 89 RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTV 148
Query: 72 PSRECPSI 79
PS SI
Sbjct: 149 PSGLVSSI 156
>sp|P09084|PAX1_MOUSE Paired box protein Pax-1 OS=Mus musculus GN=Pax1 PE=1 SV=4
Length = 446
Score = 84.0 bits (206), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 46/64 (71%)
Query: 10 LVHRYYETGSIRPRAIGGSKPRVATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSND 69
++ RY ETGSI P AIGGSKPRV T VV I YK+ P IFAWEIRDRLL +GVC
Sbjct: 141 ILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKY 200
Query: 70 NIPS 73
N+PS
Sbjct: 201 NVPS 204
>sp|P23760|PAX3_HUMAN Paired box protein Pax-3 OS=Homo sapiens GN=PAX3 PE=1 SV=2
Length = 479
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 13 RYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEGVCSNDNI 71
RY ETGSIRP AIGGSKP+ V T +V KI YKRE P +F+WEIRD+LL++ VC + +
Sbjct: 89 RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTV 148
Query: 72 PS 73
PS
Sbjct: 149 PS 150
>sp|P24610|PAX3_MOUSE Paired box protein Pax-3 OS=Mus musculus GN=Pax3 PE=1 SV=2
Length = 479
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 5/69 (7%)
Query: 6 LLCPLVHRYYETGSIRPRAIGGSKPR-VATAEVVSKISHYKRECPSIFAWEIRDRLLQEG 64
+LC RY ETGSIRP AIGGSKP+ V T +V KI YKRE P +F+WEIRD+LL++
Sbjct: 86 ILC----RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDA 141
Query: 65 VCSNDNIPS 73
VC + +PS
Sbjct: 142 VCDRNTVPS 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,974,067
Number of Sequences: 539616
Number of extensions: 1346203
Number of successful extensions: 2625
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2491
Number of HSP's gapped (non-prelim): 135
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)