Query psy4876
Match_columns 609
No_of_seqs 904 out of 3147
Neff 8.6
Searched_HMMs 46136
Date Fri Aug 16 20:03:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4876.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4876hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0305|consensus 100.0 4.1E-57 9E-62 471.5 38.0 314 246-591 154-468 (484)
2 KOG0271|consensus 100.0 4.6E-41 1E-45 328.4 26.3 279 270-582 116-479 (480)
3 KOG0272|consensus 100.0 3.7E-40 7.9E-45 326.3 22.5 284 260-582 166-458 (459)
4 KOG0286|consensus 100.0 3.3E-38 7.2E-43 299.4 33.2 282 259-582 49-343 (343)
5 KOG0271|consensus 100.0 2.9E-37 6.2E-42 301.9 24.1 249 328-588 107-443 (480)
6 KOG0279|consensus 100.0 3.2E-35 7E-40 277.6 31.4 278 271-584 17-313 (315)
7 KOG0272|consensus 100.0 1.7E-36 3.8E-41 300.2 21.1 248 334-593 174-427 (459)
8 KOG0650|consensus 100.0 1.8E-36 3.9E-41 310.7 19.5 377 92-581 287-732 (733)
9 KOG0295|consensus 100.0 1.5E-35 3.3E-40 288.7 24.6 336 207-583 48-405 (406)
10 KOG0315|consensus 100.0 7E-34 1.5E-38 264.3 29.0 269 282-591 13-295 (311)
11 KOG0273|consensus 100.0 1.1E-33 2.5E-38 283.5 32.5 276 269-584 235-523 (524)
12 KOG0284|consensus 100.0 5.4E-35 1.2E-39 288.4 17.7 290 260-587 87-383 (464)
13 KOG0265|consensus 100.0 2.2E-32 4.8E-37 260.8 28.0 275 269-582 47-336 (338)
14 cd00200 WD40 WD40 domain, foun 100.0 2.9E-31 6.4E-36 265.7 37.5 274 270-582 10-289 (289)
15 KOG0273|consensus 100.0 3.1E-32 6.7E-37 273.3 28.6 309 252-591 166-489 (524)
16 KOG0263|consensus 100.0 1.3E-32 2.9E-37 292.0 25.4 250 328-589 370-654 (707)
17 KOG0291|consensus 100.0 2E-31 4.3E-36 280.2 33.1 290 269-597 307-625 (893)
18 KOG0266|consensus 100.0 3.2E-31 7E-36 287.2 32.5 281 269-584 159-454 (456)
19 KOG0296|consensus 100.0 4.8E-31 1E-35 257.5 30.2 275 271-584 66-398 (399)
20 KOG0645|consensus 100.0 1.7E-30 3.7E-35 244.7 32.1 277 271-584 16-311 (312)
21 KOG0315|consensus 100.0 8.3E-31 1.8E-35 243.9 28.4 264 269-563 40-309 (311)
22 KOG0285|consensus 100.0 6E-31 1.3E-35 255.7 26.9 292 249-585 135-440 (460)
23 KOG0291|consensus 100.0 6.2E-30 1.4E-34 268.9 35.9 241 335-586 265-510 (893)
24 KOG0263|consensus 100.0 5.5E-31 1.2E-35 279.7 27.9 289 272-572 381-703 (707)
25 KOG0295|consensus 100.0 1.7E-31 3.6E-36 260.5 19.7 250 334-594 107-374 (406)
26 KOG0318|consensus 100.0 2.6E-29 5.6E-34 255.2 35.9 309 249-589 171-565 (603)
27 KOG0279|consensus 100.0 6.4E-30 1.4E-34 241.8 29.3 255 326-594 5-272 (315)
28 KOG0281|consensus 100.0 5.7E-32 1.2E-36 261.6 15.3 272 272-591 200-484 (499)
29 KOG0286|consensus 100.0 1.7E-29 3.6E-34 240.3 31.1 252 330-592 49-311 (343)
30 PLN00181 protein SPA1-RELATED; 100.0 4.4E-29 9.6E-34 289.4 41.3 283 269-583 483-792 (793)
31 KOG0284|consensus 100.0 2.3E-31 5E-36 262.8 15.6 243 334-589 95-342 (464)
32 KOG0276|consensus 100.0 8.7E-30 1.9E-34 262.7 27.8 280 271-588 15-302 (794)
33 KOG0285|consensus 100.0 2.8E-30 6.1E-35 251.1 22.5 253 334-600 150-405 (460)
34 KOG0266|consensus 100.0 3.9E-29 8.5E-34 270.9 31.2 250 334-594 158-419 (456)
35 KOG0318|consensus 100.0 3.3E-28 7.1E-33 247.2 33.8 281 270-591 60-357 (603)
36 KOG0277|consensus 100.0 2.6E-29 5.7E-34 234.6 22.6 263 287-583 36-308 (311)
37 KOG0319|consensus 100.0 3.2E-29 7E-34 263.5 25.8 272 277-587 332-622 (775)
38 KOG0282|consensus 100.0 6.1E-30 1.3E-34 257.8 18.6 273 271-582 216-503 (503)
39 KOG0281|consensus 100.0 1E-30 2.2E-35 253.0 12.4 237 334-589 196-433 (499)
40 KOG0319|consensus 100.0 1E-28 2.2E-33 259.9 27.2 299 266-594 59-587 (775)
41 KOG0313|consensus 100.0 1.1E-28 2.4E-33 242.0 25.5 331 206-584 49-418 (423)
42 KOG0276|consensus 100.0 5.9E-29 1.3E-33 256.6 24.4 247 334-590 12-263 (794)
43 KOG0306|consensus 100.0 1.8E-28 4E-33 257.8 28.2 280 269-587 373-667 (888)
44 KOG0293|consensus 100.0 8.2E-29 1.8E-33 244.8 23.4 294 251-586 210-515 (519)
45 KOG0274|consensus 100.0 4.1E-28 8.8E-33 263.0 30.5 280 269-592 208-490 (537)
46 cd00200 WD40 WD40 domain, foun 100.0 1.6E-27 3.4E-32 238.6 32.7 246 334-591 8-256 (289)
47 KOG0278|consensus 100.0 3.5E-29 7.6E-34 233.0 17.8 278 271-589 16-302 (334)
48 KOG0292|consensus 100.0 4.8E-28 1E-32 258.1 28.2 284 271-588 11-325 (1202)
49 KOG0316|consensus 100.0 8.2E-28 1.8E-32 222.3 26.0 271 269-582 17-297 (307)
50 KOG0316|consensus 100.0 3.9E-28 8.6E-33 224.4 22.7 254 328-594 9-267 (307)
51 KOG0275|consensus 100.0 1.2E-28 2.7E-33 236.5 16.5 285 267-582 211-507 (508)
52 KOG0645|consensus 100.0 1.6E-26 3.4E-31 218.0 30.1 247 326-586 4-263 (312)
53 PTZ00421 coronin; Provisional 100.0 6.6E-26 1.4E-30 245.4 37.2 290 272-586 25-333 (493)
54 PLN00181 protein SPA1-RELATED; 100.0 2.7E-26 5.8E-31 266.2 36.3 239 334-586 482-740 (793)
55 KOG0310|consensus 100.0 5.5E-27 1.2E-31 237.0 25.8 276 271-587 28-312 (487)
56 KOG0643|consensus 100.0 2.4E-26 5.2E-31 216.3 26.9 281 270-586 11-319 (327)
57 KOG0288|consensus 100.0 7.4E-28 1.6E-32 238.4 17.3 285 253-582 163-459 (459)
58 KOG0973|consensus 100.0 1.3E-26 2.9E-31 254.1 28.1 297 268-588 12-359 (942)
59 KOG0277|consensus 100.0 2.6E-27 5.6E-32 221.3 19.1 236 271-541 62-308 (311)
60 KOG0283|consensus 100.0 5.6E-27 1.2E-31 251.3 23.5 241 334-588 266-580 (712)
61 KOG0313|consensus 100.0 1.9E-26 4.1E-31 226.4 24.4 252 327-587 97-379 (423)
62 KOG0294|consensus 100.0 5.4E-26 1.2E-30 218.5 26.7 276 282-589 4-286 (362)
63 KOG0296|consensus 100.0 5.8E-26 1.3E-30 222.1 26.8 247 329-589 57-361 (399)
64 KOG0292|consensus 99.9 9.5E-27 2.1E-31 248.2 22.2 246 334-591 8-287 (1202)
65 KOG0772|consensus 99.9 5.5E-26 1.2E-30 230.3 26.1 297 252-581 154-484 (641)
66 KOG1446|consensus 99.9 1.2E-24 2.5E-29 210.1 32.6 275 270-585 15-304 (311)
67 KOG0310|consensus 99.9 2.1E-26 4.5E-31 232.8 20.6 241 334-587 25-271 (487)
68 KOG0306|consensus 99.9 2.9E-25 6.4E-30 233.8 29.4 279 270-585 66-485 (888)
69 KOG0265|consensus 99.9 6.3E-26 1.4E-30 216.8 21.1 212 370-591 40-253 (338)
70 PTZ00421 coronin; Provisional 99.9 1.6E-24 3.4E-29 234.7 34.2 245 337-590 22-296 (493)
71 KOG0282|consensus 99.9 9.7E-27 2.1E-31 234.8 15.6 254 328-594 206-472 (503)
72 KOG1408|consensus 99.9 8.5E-26 1.8E-30 235.9 22.8 298 282-585 395-714 (1080)
73 KOG0289|consensus 99.9 4.9E-25 1.1E-29 219.6 27.2 274 272-583 222-505 (506)
74 KOG1446|consensus 99.9 2.8E-24 6E-29 207.5 30.8 247 334-594 13-272 (311)
75 KOG1407|consensus 99.9 1.7E-24 3.6E-29 203.3 28.4 275 271-584 22-311 (313)
76 KOG0264|consensus 99.9 3.6E-25 7.7E-30 222.5 23.4 254 325-585 114-405 (422)
77 KOG0275|consensus 99.9 1.6E-25 3.5E-30 215.2 17.3 249 332-592 210-475 (508)
78 KOG1407|consensus 99.9 1.3E-24 2.9E-29 204.0 22.7 244 334-591 19-268 (313)
79 PTZ00420 coronin; Provisional 99.9 1.9E-23 4.2E-28 227.4 34.7 224 353-587 50-296 (568)
80 KOG0641|consensus 99.9 5.9E-23 1.3E-27 188.8 32.2 294 266-584 29-349 (350)
81 KOG0293|consensus 99.9 8.5E-25 1.8E-29 216.5 21.0 249 331-591 219-477 (519)
82 PTZ00420 coronin; Provisional 99.9 5E-23 1.1E-27 224.2 36.2 229 328-567 66-319 (568)
83 KOG0640|consensus 99.9 1.1E-24 2.5E-29 208.5 20.5 296 270-584 113-426 (430)
84 KOG0647|consensus 99.9 1.4E-23 3E-28 200.9 25.7 264 271-572 29-311 (347)
85 KOG0274|consensus 99.9 4E-24 8.6E-29 232.0 25.0 240 334-594 207-451 (537)
86 KOG0301|consensus 99.9 1.5E-23 3.3E-28 219.6 27.1 270 271-587 16-291 (745)
87 KOG0269|consensus 99.9 2.5E-24 5.5E-29 227.8 20.2 241 337-586 89-342 (839)
88 KOG0973|consensus 99.9 1E-23 2.3E-28 231.5 25.5 247 334-589 12-317 (942)
89 KOG0264|consensus 99.9 6.3E-24 1.4E-28 213.6 21.4 249 269-542 124-404 (422)
90 KOG0639|consensus 99.9 4.3E-23 9.4E-28 208.5 27.3 280 269-583 419-703 (705)
91 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 4.7E-22 1E-26 203.2 35.8 272 282-594 4-289 (300)
92 KOG0288|consensus 99.9 8.2E-25 1.8E-29 216.9 14.1 248 334-596 174-429 (459)
93 KOG0268|consensus 99.9 2.4E-24 5.2E-29 210.4 15.8 274 270-589 67-350 (433)
94 KOG1539|consensus 99.9 2.9E-23 6.3E-28 221.3 24.9 322 146-544 316-650 (910)
95 KOG0268|consensus 99.9 2E-24 4.4E-29 210.9 14.1 243 331-588 61-306 (433)
96 KOG0305|consensus 99.9 3.4E-23 7.4E-28 217.2 24.3 238 269-544 217-463 (484)
97 KOG0283|consensus 99.9 2.8E-23 6.1E-28 223.0 23.7 258 269-542 267-576 (712)
98 KOG0308|consensus 99.9 6.9E-24 1.5E-28 220.6 18.3 274 282-587 40-330 (735)
99 KOG1036|consensus 99.9 4.8E-22 1E-26 191.2 29.3 276 270-587 14-319 (323)
100 KOG0299|consensus 99.9 9.7E-23 2.1E-27 204.9 25.5 293 269-584 142-456 (479)
101 KOG1274|consensus 99.9 9E-23 1.9E-27 219.9 26.8 243 334-588 12-266 (933)
102 KOG1036|consensus 99.9 1.6E-22 3.4E-27 194.5 24.8 242 334-592 12-270 (323)
103 KOG0647|consensus 99.9 1E-22 2.3E-27 194.9 23.4 242 334-591 26-288 (347)
104 KOG0300|consensus 99.9 8.3E-23 1.8E-27 196.2 22.3 264 284-587 165-479 (481)
105 KOG0278|consensus 99.9 6.3E-24 1.4E-28 198.1 13.4 245 333-591 12-261 (334)
106 KOG0646|consensus 99.9 1.8E-22 3.9E-27 203.4 24.6 241 348-593 51-316 (476)
107 KOG0640|consensus 99.9 7.5E-23 1.6E-27 196.1 19.3 254 334-595 111-394 (430)
108 KOG2096|consensus 99.9 6.9E-22 1.5E-26 190.3 25.7 294 270-594 87-412 (420)
109 KOG0641|consensus 99.9 4.5E-21 9.7E-26 176.5 29.7 251 324-587 21-306 (350)
110 KOG0308|consensus 99.9 4.3E-23 9.4E-28 214.7 18.6 242 340-586 29-287 (735)
111 KOG1539|consensus 99.9 6.6E-22 1.4E-26 211.1 27.1 284 270-589 245-611 (910)
112 KOG0321|consensus 99.9 2.3E-22 5E-27 209.0 22.5 284 281-590 65-397 (720)
113 KOG1274|consensus 99.9 1.6E-21 3.5E-26 210.3 28.7 272 272-581 16-297 (933)
114 KOG1332|consensus 99.9 3.1E-22 6.6E-27 186.5 19.0 247 334-587 10-289 (299)
115 KOG1332|consensus 99.9 3.6E-22 7.9E-27 186.0 19.3 236 275-542 19-286 (299)
116 KOG0289|consensus 99.9 1.3E-21 2.7E-26 195.4 23.4 235 336-582 220-460 (506)
117 KOG0299|consensus 99.9 1.6E-21 3.4E-26 196.3 23.6 241 334-587 141-413 (479)
118 KOG2445|consensus 99.9 6.1E-21 1.3E-25 183.3 26.1 249 334-587 12-321 (361)
119 KOG0643|consensus 99.9 8.3E-21 1.8E-25 179.0 25.7 237 334-578 9-255 (327)
120 KOG4283|consensus 99.9 6.9E-21 1.5E-25 181.6 25.4 297 270-588 44-369 (397)
121 KOG2055|consensus 99.9 3.2E-21 7E-26 193.9 23.7 278 270-584 214-512 (514)
122 KOG0772|consensus 99.9 8.7E-22 1.9E-26 200.0 19.5 251 269-542 214-487 (641)
123 KOG2106|consensus 99.9 7.4E-20 1.6E-24 185.7 33.4 273 269-583 200-520 (626)
124 KOG4328|consensus 99.9 2.5E-21 5.4E-26 194.6 22.6 284 271-584 188-495 (498)
125 KOG4378|consensus 99.9 1.8E-21 4E-26 196.7 21.1 260 272-566 37-305 (673)
126 KOG1408|consensus 99.9 8.8E-21 1.9E-25 198.7 26.7 285 274-592 329-679 (1080)
127 KOG1273|consensus 99.9 7.7E-21 1.7E-25 182.9 23.8 279 272-588 26-326 (405)
128 KOG0270|consensus 99.9 4.7E-21 1E-25 192.1 23.2 246 336-591 174-456 (463)
129 KOG0269|consensus 99.9 5.7E-22 1.2E-26 210.1 17.1 243 270-542 88-340 (839)
130 KOG0301|consensus 99.9 4.5E-21 9.8E-26 201.2 22.5 236 328-584 6-249 (745)
131 KOG0267|consensus 99.9 1.2E-22 2.6E-27 213.6 10.6 231 334-576 27-260 (825)
132 KOG0300|consensus 99.9 7.3E-21 1.6E-25 182.8 21.0 252 325-589 137-433 (481)
133 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 2.4E-19 5.2E-24 183.2 33.6 253 272-564 33-300 (300)
134 KOG0307|consensus 99.9 9E-22 2E-26 217.2 14.7 258 327-591 56-334 (1049)
135 KOG0267|consensus 99.9 3.1E-22 6.6E-27 210.6 9.2 220 271-527 30-255 (825)
136 KOG4283|consensus 99.9 1.4E-20 3.1E-25 179.5 19.1 219 334-594 42-286 (397)
137 KOG2048|consensus 99.9 6.3E-19 1.4E-23 185.0 31.1 281 272-585 28-320 (691)
138 KOG0639|consensus 99.9 1.3E-20 2.8E-25 190.7 16.8 239 264-541 460-703 (705)
139 KOG0294|consensus 99.9 1.1E-19 2.4E-24 175.2 22.0 225 350-589 4-242 (362)
140 KOG0646|consensus 99.9 3.7E-20 8E-25 186.8 19.6 222 334-567 80-332 (476)
141 KOG2106|consensus 99.8 1.4E-18 3.1E-23 176.5 30.1 288 270-595 155-488 (626)
142 KOG0302|consensus 99.8 7.5E-20 1.6E-24 180.0 19.2 195 387-588 165-382 (440)
143 KOG0307|consensus 99.8 1E-20 2.2E-25 209.0 14.5 250 266-545 61-330 (1049)
144 KOG0270|consensus 99.8 1E-19 2.3E-24 182.5 20.3 205 334-547 242-454 (463)
145 KOG1063|consensus 99.8 4.7E-19 1E-23 186.1 25.7 297 265-587 263-651 (764)
146 KOG2048|consensus 99.8 1.3E-18 2.8E-23 182.6 28.5 244 334-588 24-279 (691)
147 KOG0302|consensus 99.8 2.6E-19 5.6E-24 176.2 21.9 240 333-581 149-435 (440)
148 KOG2919|consensus 99.8 4.8E-19 1E-23 171.2 22.3 281 271-575 51-361 (406)
149 KOG2055|consensus 99.8 2.7E-19 5.8E-24 180.2 20.5 244 269-542 257-512 (514)
150 KOG4378|consensus 99.8 3.7E-19 8.1E-24 180.1 21.2 270 281-588 4-284 (673)
151 KOG1538|consensus 99.8 8.2E-19 1.8E-23 182.8 23.0 274 271-587 14-296 (1081)
152 KOG1063|consensus 99.8 4.4E-18 9.5E-23 178.8 27.8 280 273-584 18-391 (764)
153 KOG1587|consensus 99.8 7.1E-18 1.5E-22 182.1 28.4 253 331-587 238-519 (555)
154 KOG1009|consensus 99.8 4.6E-18 1E-22 169.1 24.1 296 271-588 15-376 (434)
155 KOG1445|consensus 99.8 5.6E-18 1.2E-22 175.7 24.4 118 467-588 628-754 (1012)
156 KOG1034|consensus 99.8 2.8E-18 6E-23 166.4 20.5 281 272-584 41-383 (385)
157 KOG1188|consensus 99.8 2.6E-18 5.6E-23 167.5 19.9 270 282-584 43-346 (376)
158 KOG4328|consensus 99.8 4.4E-18 9.5E-23 171.4 21.9 244 334-587 185-453 (498)
159 KOG0650|consensus 99.8 3.1E-18 6.8E-23 177.1 20.0 235 334-582 399-678 (733)
160 KOG0290|consensus 99.8 2.4E-17 5.3E-22 157.4 24.5 284 266-581 41-362 (364)
161 PRK11028 6-phosphogluconolacto 99.8 1.6E-16 3.5E-21 165.9 32.3 273 283-585 6-305 (330)
162 KOG2445|consensus 99.8 4.7E-17 1E-21 156.7 25.2 251 271-551 15-330 (361)
163 COG2319 FOG: WD40 repeat [Gene 99.8 1.1E-15 2.5E-20 160.6 37.6 278 270-585 156-443 (466)
164 COG2319 FOG: WD40 repeat [Gene 99.8 1.6E-15 3.5E-20 159.4 38.6 280 269-587 65-362 (466)
165 KOG2919|consensus 99.8 3.6E-17 7.9E-22 158.3 22.1 246 336-586 50-329 (406)
166 KOG0303|consensus 99.8 7.6E-17 1.6E-21 159.7 23.5 202 334-545 80-297 (472)
167 KOG1007|consensus 99.8 4.3E-17 9.4E-22 155.5 20.1 237 326-585 112-362 (370)
168 KOG0642|consensus 99.8 7.5E-18 1.6E-22 173.8 15.9 249 331-590 289-567 (577)
169 KOG0303|consensus 99.8 1.1E-16 2.4E-21 158.5 21.8 238 337-587 29-297 (472)
170 KOG2096|consensus 99.8 7.7E-17 1.7E-21 155.7 19.9 212 371-588 80-312 (420)
171 KOG0290|consensus 99.8 6.7E-17 1.4E-21 154.4 19.1 237 269-538 96-361 (364)
172 KOG1273|consensus 99.7 1.1E-16 2.5E-21 154.3 19.2 194 380-585 26-227 (405)
173 KOG0321|consensus 99.7 1E-16 2.3E-21 167.2 20.0 247 339-590 53-353 (720)
174 KOG4227|consensus 99.7 3.7E-16 8.1E-21 154.3 22.8 286 269-584 56-387 (609)
175 KOG0649|consensus 99.7 1.3E-15 2.8E-20 142.3 24.1 236 336-587 11-277 (325)
176 KOG0322|consensus 99.7 1.6E-16 3.4E-21 150.1 16.3 291 255-583 4-322 (323)
177 KOG1524|consensus 99.7 5.7E-16 1.2E-20 158.6 20.4 257 272-581 17-283 (737)
178 KOG1517|consensus 99.7 2.4E-15 5.1E-20 164.6 25.2 277 275-587 1070-1384(1387)
179 KOG1587|consensus 99.7 2.1E-15 4.6E-20 163.0 23.5 251 255-542 233-516 (555)
180 KOG0644|consensus 99.7 8.6E-17 1.9E-21 171.8 12.0 250 334-590 189-474 (1113)
181 KOG1007|consensus 99.7 1.4E-15 3E-20 145.4 18.0 206 271-499 125-361 (370)
182 KOG1188|consensus 99.7 2.4E-15 5.2E-20 147.0 20.0 228 348-584 41-297 (376)
183 KOG1445|consensus 99.7 5.7E-16 1.2E-20 161.0 16.3 230 285-543 599-845 (1012)
184 KOG1963|consensus 99.7 1.8E-14 3.8E-19 156.2 28.3 281 273-586 164-540 (792)
185 KOG2110|consensus 99.7 1.7E-13 3.8E-18 135.4 31.9 274 272-586 8-332 (391)
186 KOG2110|consensus 99.7 5E-14 1.1E-18 139.2 27.6 237 336-587 6-251 (391)
187 PRK01742 tolB translocation pr 99.7 6.4E-15 1.4E-19 159.2 23.4 212 334-565 202-426 (429)
188 KOG1240|consensus 99.7 2.1E-14 4.5E-19 159.6 25.1 298 256-582 1035-1431(1431)
189 KOG1034|consensus 99.6 5.1E-15 1.1E-19 143.9 17.4 234 274-541 94-382 (385)
190 KOG4227|consensus 99.6 1.9E-14 4.2E-19 142.3 20.7 246 334-588 55-326 (609)
191 KOG2139|consensus 99.6 1.2E-13 2.6E-18 136.0 25.8 277 269-584 98-431 (445)
192 KOG0642|consensus 99.6 4E-15 8.7E-20 153.8 15.6 256 269-554 294-573 (577)
193 KOG0649|consensus 99.6 3.9E-13 8.4E-18 125.9 27.2 271 274-582 15-314 (325)
194 PRK03629 tolB translocation pr 99.6 2.2E-13 4.7E-18 147.1 28.9 220 334-565 197-428 (429)
195 KOG1310|consensus 99.6 6E-15 1.3E-19 151.5 15.2 217 329-549 43-310 (758)
196 PRK11028 6-phosphogluconolacto 99.6 5.8E-13 1.2E-17 139.1 30.4 239 273-542 38-304 (330)
197 KOG2111|consensus 99.6 4.7E-13 1E-17 130.0 27.1 241 337-591 7-263 (346)
198 KOG0771|consensus 99.6 1.1E-13 2.4E-18 139.1 23.1 199 381-589 148-359 (398)
199 KOG1009|consensus 99.6 4.8E-14 1E-18 140.7 19.9 245 334-588 12-333 (434)
200 KOG1334|consensus 99.6 1E-14 2.2E-19 148.3 14.7 289 270-588 143-470 (559)
201 KOG1523|consensus 99.6 1.3E-13 2.7E-18 134.0 21.4 234 334-575 9-269 (361)
202 KOG1523|consensus 99.6 1.3E-13 2.8E-18 133.9 21.2 228 272-527 13-266 (361)
203 KOG1538|consensus 99.6 5.4E-14 1.2E-18 147.2 19.2 229 336-584 13-252 (1081)
204 PRK01742 tolB translocation pr 99.6 1E-13 2.2E-18 149.8 22.2 210 356-585 183-402 (429)
205 KOG0644|consensus 99.6 3.1E-15 6.7E-20 160.1 9.6 233 272-544 193-470 (1113)
206 PRK04922 tolB translocation pr 99.6 5.4E-13 1.2E-17 144.4 26.8 219 334-564 202-432 (433)
207 KOG1517|consensus 99.6 2.1E-13 4.6E-18 149.5 23.3 247 271-544 1111-1383(1387)
208 KOG1963|consensus 99.6 1.1E-12 2.3E-17 142.5 28.2 286 275-594 22-385 (792)
209 KOG2394|consensus 99.6 1.4E-13 2.9E-18 141.7 19.4 218 345-590 183-458 (636)
210 KOG2139|consensus 99.6 2.4E-13 5.2E-18 133.8 20.1 227 335-576 98-367 (445)
211 PF08662 eIF2A: Eukaryotic tra 99.6 3.9E-13 8.4E-18 128.8 20.9 158 421-588 8-183 (194)
212 PRK05137 tolB translocation pr 99.6 1.6E-12 3.4E-17 141.0 27.6 218 334-564 200-432 (435)
213 PRK05137 tolB translocation pr 99.6 2.8E-12 6.1E-17 139.0 29.3 220 357-588 182-416 (435)
214 KOG1272|consensus 99.6 1.4E-14 3.1E-19 146.5 10.1 265 270-578 130-403 (545)
215 KOG2111|consensus 99.6 1.4E-11 3.1E-16 119.8 30.4 274 275-584 11-322 (346)
216 PRK02889 tolB translocation pr 99.5 1.7E-12 3.7E-17 140.2 26.8 221 334-565 194-425 (427)
217 KOG1240|consensus 99.5 1.3E-12 2.9E-17 145.6 25.0 255 328-589 1040-1339(1431)
218 PF02239 Cytochrom_D1: Cytochr 99.5 1.7E-11 3.7E-16 129.0 32.2 274 285-594 12-357 (369)
219 KOG3881|consensus 99.5 1.1E-12 2.5E-17 130.5 20.7 263 334-601 54-337 (412)
220 PF10282 Lactonase: Lactonase, 99.5 1.2E-10 2.5E-15 122.4 37.0 257 324-585 25-323 (345)
221 KOG1310|consensus 99.5 2.3E-13 5.1E-18 140.0 14.2 218 369-589 42-308 (758)
222 KOG1524|consensus 99.5 6.7E-13 1.5E-17 136.3 16.4 227 334-579 13-250 (737)
223 PRK04922 tolB translocation pr 99.5 9.3E-12 2E-16 134.8 26.6 216 357-586 184-413 (433)
224 KOG0771|consensus 99.5 3.9E-13 8.4E-18 135.2 14.4 190 273-499 148-354 (398)
225 PRK03629 tolB translocation pr 99.5 3E-11 6.6E-16 130.4 30.2 217 357-587 179-409 (429)
226 KOG4497|consensus 99.5 2.2E-11 4.7E-16 118.8 25.6 274 272-579 51-427 (447)
227 PF08662 eIF2A: Eukaryotic tra 99.5 6.1E-12 1.3E-16 120.5 21.1 142 397-549 37-185 (194)
228 PF02239 Cytochrom_D1: Cytochr 99.5 6.2E-11 1.4E-15 124.7 30.4 249 275-551 42-356 (369)
229 KOG1334|consensus 99.4 7.1E-13 1.5E-17 135.1 13.1 256 330-592 136-432 (559)
230 KOG2394|consensus 99.4 1.2E-12 2.7E-17 134.7 14.7 163 282-476 188-384 (636)
231 KOG2315|consensus 99.4 6.4E-11 1.4E-15 123.1 27.2 286 272-593 37-353 (566)
232 KOG4497|consensus 99.4 1.4E-11 3.1E-16 120.0 20.8 273 275-587 14-394 (447)
233 PRK02889 tolB translocation pr 99.4 3.9E-11 8.5E-16 129.6 26.7 213 357-583 176-402 (427)
234 TIGR02800 propeller_TolB tol-p 99.4 9E-11 2E-15 126.6 28.4 217 334-562 188-416 (417)
235 KOG3881|consensus 99.4 1.2E-11 2.5E-16 123.4 19.3 219 275-524 111-345 (412)
236 KOG2321|consensus 99.4 3.6E-11 7.9E-16 124.9 23.5 279 272-587 54-346 (703)
237 KOG1354|consensus 99.4 5.6E-12 1.2E-16 123.6 16.5 246 334-588 24-363 (433)
238 PRK00178 tolB translocation pr 99.4 1.2E-10 2.6E-15 126.2 28.6 220 334-565 197-428 (430)
239 KOG1272|consensus 99.4 8.5E-13 1.8E-17 133.8 10.7 232 335-584 129-362 (545)
240 PRK04792 tolB translocation pr 99.4 1.7E-10 3.8E-15 125.1 27.0 218 334-564 216-446 (448)
241 KOG2321|consensus 99.4 2.6E-11 5.6E-16 126.0 18.7 254 324-594 40-312 (703)
242 KOG0322|consensus 99.4 1.6E-11 3.5E-16 116.5 15.6 156 334-498 149-322 (323)
243 KOG0309|consensus 99.4 8.1E-12 1.8E-16 132.7 14.4 287 269-586 24-341 (1081)
244 PRK01029 tolB translocation pr 99.4 6.5E-10 1.4E-14 119.8 29.1 234 324-566 175-426 (428)
245 TIGR02800 propeller_TolB tol-p 99.3 5.6E-10 1.2E-14 120.4 28.5 216 357-584 170-397 (417)
246 COG5354 Uncharacterized protei 99.3 2.9E-10 6.4E-15 116.9 24.3 280 269-587 32-351 (561)
247 PRK01029 tolB translocation pr 99.3 3.9E-10 8.5E-15 121.5 26.7 215 274-522 189-426 (428)
248 KOG2315|consensus 99.3 4.4E-10 9.6E-15 117.0 25.4 236 339-588 129-394 (566)
249 PRK00178 tolB translocation pr 99.3 8.6E-10 1.9E-14 119.5 29.2 216 358-586 180-408 (430)
250 COG4946 Uncharacterized protei 99.3 1.3E-08 2.9E-13 103.9 31.9 171 346-527 331-505 (668)
251 KOG0280|consensus 99.3 1E-09 2.2E-14 106.0 22.1 245 334-588 68-337 (339)
252 COG2706 3-carboxymuconate cycl 99.3 3.6E-08 7.8E-13 98.4 32.9 271 288-587 15-324 (346)
253 KOG1409|consensus 99.2 4.2E-10 9.1E-15 110.7 18.4 271 280-585 37-395 (404)
254 PRK04792 tolB translocation pr 99.2 2.9E-09 6.4E-14 115.6 27.2 216 358-586 199-427 (448)
255 TIGR02658 TTQ_MADH_Hv methylam 99.2 3.7E-08 8.1E-13 101.8 33.3 266 289-592 27-338 (352)
256 PF10282 Lactonase: Lactonase, 99.2 6.5E-08 1.4E-12 101.6 35.7 260 275-562 42-345 (345)
257 KOG4547|consensus 99.2 2.3E-09 4.9E-14 112.6 23.7 143 347-500 70-221 (541)
258 KOG2041|consensus 99.2 1.4E-09 3E-14 115.6 21.6 296 266-580 11-333 (1189)
259 KOG2314|consensus 99.2 3.1E-09 6.6E-14 110.4 23.7 282 269-588 210-577 (698)
260 TIGR02658 TTQ_MADH_Hv methylam 99.2 2.6E-08 5.6E-13 103.0 30.4 235 287-550 75-338 (352)
261 KOG1912|consensus 99.2 1.2E-09 2.6E-14 117.1 20.6 283 272-587 18-367 (1062)
262 KOG0974|consensus 99.2 4.7E-10 1E-14 124.2 17.9 193 336-542 88-288 (967)
263 KOG4547|consensus 99.2 3.6E-09 7.7E-14 111.1 23.4 186 345-543 3-221 (541)
264 PF08145 BOP1NT: BOP1NT (NUC16 99.2 1E-12 2.2E-17 126.4 -4.4 92 89-222 155-248 (260)
265 KOG0280|consensus 99.1 4.6E-09 9.9E-14 101.6 18.9 196 338-543 124-334 (339)
266 PF04762 IKI3: IKI3 family; I 99.1 1.3E-07 2.9E-12 110.1 33.7 279 271-587 77-459 (928)
267 KOG1354|consensus 99.1 1.1E-08 2.3E-13 100.9 20.7 291 271-581 27-431 (433)
268 PLN02919 haloacid dehalogenase 99.1 9.1E-08 2E-12 113.5 32.1 243 339-588 571-892 (1057)
269 KOG1064|consensus 99.1 4.2E-10 9E-15 129.8 11.5 192 272-508 2211-2407(2439)
270 TIGR03300 assembly_YfgL outer 99.1 2.4E-07 5.2E-12 98.6 30.3 268 281-592 67-346 (377)
271 KOG0974|consensus 99.0 4.1E-09 8.9E-14 116.9 16.0 181 281-500 101-289 (967)
272 TIGR03300 assembly_YfgL outer 99.0 2.2E-07 4.9E-12 98.8 28.1 253 281-581 107-376 (377)
273 PF04762 IKI3: IKI3 family; I 99.0 4.4E-07 9.6E-12 105.8 32.0 242 335-586 209-521 (928)
274 KOG2041|consensus 99.0 1.1E-08 2.3E-13 109.0 16.4 229 334-575 13-279 (1189)
275 COG5354 Uncharacterized protei 99.0 1.8E-07 4E-12 96.7 23.1 257 274-576 136-421 (561)
276 COG5170 CDC55 Serine/threonine 98.9 1.2E-08 2.5E-13 99.3 13.1 240 334-582 25-365 (460)
277 PF15492 Nbas_N: Neuroblastoma 98.9 1.8E-06 4E-11 84.0 28.0 236 275-553 3-270 (282)
278 KOG4190|consensus 98.9 2E-09 4.3E-14 111.3 8.1 207 369-587 727-951 (1034)
279 KOG3914|consensus 98.9 1.9E-08 4.1E-13 101.3 14.1 161 337-510 64-234 (390)
280 KOG1064|consensus 98.9 7.3E-09 1.6E-13 119.9 12.4 196 376-594 2207-2408(2439)
281 PRK04043 tolB translocation pr 98.9 1.7E-06 3.6E-11 93.0 30.0 216 357-587 169-403 (419)
282 KOG1912|consensus 98.9 1.7E-07 3.7E-12 101.0 21.8 242 335-589 15-309 (1062)
283 PRK04043 tolB translocation pr 98.9 8.8E-07 1.9E-11 95.1 27.2 179 397-588 169-361 (419)
284 PF08450 SGL: SMP-30/Gluconola 98.9 6E-06 1.3E-10 82.4 31.3 217 340-573 4-244 (246)
285 COG2706 3-carboxymuconate cycl 98.9 2.5E-06 5.5E-11 85.4 27.8 224 357-586 16-276 (346)
286 PLN02919 haloacid dehalogenase 98.9 3.9E-06 8.4E-11 99.8 33.1 202 337-546 625-892 (1057)
287 KOG4532|consensus 98.8 1.2E-06 2.5E-11 84.1 21.9 225 347-584 84-331 (344)
288 KOG4532|consensus 98.8 2.2E-06 4.8E-11 82.3 23.1 227 273-528 71-320 (344)
289 COG4946 Uncharacterized protei 98.8 4.1E-06 9E-11 86.1 25.5 145 276-450 328-479 (668)
290 KOG3914|consensus 98.7 1.5E-07 3.3E-12 94.9 14.0 168 421-594 65-233 (390)
291 KOG1832|consensus 98.7 6.3E-09 1.4E-13 112.9 3.9 217 327-570 1092-1317(1516)
292 PF13360 PQQ_2: PQQ-like domai 98.7 9.3E-06 2E-10 80.2 25.7 214 356-588 2-234 (238)
293 PF13360 PQQ_2: PQQ-like domai 98.7 2.2E-05 4.7E-10 77.5 28.4 189 345-549 34-237 (238)
294 KOG1409|consensus 98.7 1.3E-06 2.8E-11 86.5 18.6 249 326-588 14-274 (404)
295 PF08450 SGL: SMP-30/Gluconola 98.7 3.6E-05 7.9E-10 76.7 29.4 218 274-529 4-244 (246)
296 KOG1920|consensus 98.7 5.7E-06 1.2E-10 94.0 25.3 274 270-583 69-364 (1265)
297 KOG0309|consensus 98.7 1.9E-07 4.1E-12 100.1 12.8 242 269-542 67-339 (1081)
298 PRK11138 outer membrane biogen 98.7 1.5E-05 3.3E-10 85.3 27.7 255 280-583 121-393 (394)
299 PF15492 Nbas_N: Neuroblastoma 98.7 3.1E-05 6.8E-10 75.6 26.7 234 341-590 3-265 (282)
300 KOG4714|consensus 98.7 9.3E-07 2E-11 84.5 15.8 150 343-500 97-255 (319)
301 KOG4190|consensus 98.7 2.3E-07 5.1E-12 96.3 12.4 264 281-580 749-1032(1034)
302 KOG2314|consensus 98.6 5.1E-06 1.1E-10 86.9 21.6 225 274-529 310-556 (698)
303 KOG1645|consensus 98.6 1.1E-06 2.4E-11 88.7 16.0 242 334-585 192-462 (463)
304 PRK11138 outer membrane biogen 98.6 2.6E-05 5.6E-10 83.6 26.8 236 346-592 119-361 (394)
305 KOG1275|consensus 98.6 3.2E-06 7E-11 93.1 19.3 184 386-582 146-340 (1118)
306 KOG2695|consensus 98.6 2.3E-07 5E-12 91.7 9.0 160 341-510 217-387 (425)
307 KOG4714|consensus 98.5 4.4E-07 9.6E-12 86.6 9.1 199 380-585 39-255 (319)
308 KOG1275|consensus 98.5 2.7E-06 5.9E-11 93.6 16.2 181 346-540 146-340 (1118)
309 PF07433 DUF1513: Protein of u 98.5 0.00017 3.6E-09 72.6 27.6 222 338-574 7-276 (305)
310 PF00400 WD40: WD domain, G-be 98.5 4.5E-07 9.7E-12 62.4 6.3 39 544-582 1-39 (39)
311 KOG0882|consensus 98.5 3.8E-06 8.2E-11 85.9 15.3 277 272-581 12-369 (558)
312 PF07433 DUF1513: Protein of u 98.5 0.0002 4.3E-09 72.0 27.1 219 274-522 9-269 (305)
313 PRK02888 nitrous-oxide reducta 98.5 6.8E-05 1.5E-09 81.9 25.3 297 258-585 54-405 (635)
314 KOG2114|consensus 98.4 5.6E-05 1.2E-09 83.3 24.2 210 342-560 30-262 (933)
315 PF00930 DPPIV_N: Dipeptidyl p 98.4 0.0002 4.4E-09 75.5 27.5 254 287-573 21-346 (353)
316 KOG2695|consensus 98.4 6.9E-07 1.5E-11 88.4 7.4 147 275-450 217-378 (425)
317 PF14583 Pectate_lyase22: Olig 98.3 0.0015 3.3E-08 67.7 30.0 283 269-584 35-381 (386)
318 KOG1008|consensus 98.3 2.2E-07 4.7E-12 98.6 1.7 200 267-499 54-275 (783)
319 PF06433 Me-amine-dh_H: Methyl 98.3 0.00097 2.1E-08 67.9 27.7 209 339-552 98-330 (342)
320 PF11768 DUF3312: Protein of u 98.3 0.00057 1.2E-08 73.2 27.1 116 470-589 209-334 (545)
321 PF00400 WD40: WD domain, G-be 98.3 2.8E-06 6.1E-11 58.3 6.7 38 409-446 2-39 (39)
322 PF08596 Lgl_C: Lethal giant l 98.3 0.00023 5E-09 75.5 23.2 244 337-587 3-338 (395)
323 cd00216 PQQ_DH Dehydrogenases 98.2 0.00066 1.4E-08 74.8 27.6 233 348-594 111-434 (488)
324 COG5170 CDC55 Serine/threonine 98.2 3.5E-05 7.6E-10 75.5 15.1 254 270-540 27-365 (460)
325 KOG2066|consensus 98.2 0.00011 2.3E-09 80.6 19.8 183 335-542 39-233 (846)
326 KOG3621|consensus 98.2 0.00029 6.2E-09 76.4 22.2 278 269-590 35-359 (726)
327 KOG0882|consensus 98.2 1.3E-05 2.9E-10 82.0 11.0 209 376-592 8-239 (558)
328 KOG3617|consensus 98.2 4E-05 8.6E-10 83.9 15.0 261 275-585 21-334 (1416)
329 PF06977 SdiA-regulated: SdiA- 98.2 0.00085 1.8E-08 66.4 23.3 198 335-539 21-247 (248)
330 KOG1832|consensus 98.1 2.7E-06 5.9E-11 93.0 5.0 194 368-587 1092-1294(1516)
331 KOG2066|consensus 98.1 7.2E-05 1.6E-09 82.0 15.5 182 377-584 39-233 (846)
332 KOG1920|consensus 98.1 0.00096 2.1E-08 76.5 24.3 209 376-587 67-325 (1265)
333 KOG2114|consensus 98.1 0.00056 1.2E-08 75.7 21.8 202 379-588 27-247 (933)
334 PF04053 Coatomer_WDAD: Coatom 98.1 0.0014 3.1E-08 70.5 24.8 228 334-594 31-272 (443)
335 KOG1008|consensus 98.1 2.5E-06 5.3E-11 90.8 3.5 242 334-585 55-336 (783)
336 KOG1645|consensus 98.1 0.00031 6.7E-09 71.4 18.0 232 270-542 194-461 (463)
337 PF11768 DUF3312: Protein of u 98.0 0.00015 3.3E-09 77.4 16.3 124 324-450 194-331 (545)
338 PF06433 Me-amine-dh_H: Methyl 98.0 0.0034 7.4E-08 64.0 25.1 248 336-593 36-329 (342)
339 COG0823 TolB Periplasmic compo 97.9 0.0011 2.4E-08 71.1 20.5 187 334-532 191-391 (425)
340 PF04841 Vps16_N: Vps16, N-ter 97.9 0.015 3.2E-07 62.5 29.3 179 335-527 80-276 (410)
341 PF04053 Coatomer_WDAD: Coatom 97.9 0.0034 7.4E-08 67.6 23.2 224 269-541 32-261 (443)
342 PF02897 Peptidase_S9_N: Proly 97.9 0.017 3.6E-07 62.3 29.0 249 338-590 126-410 (414)
343 PRK02888 nitrous-oxide reducta 97.8 0.0039 8.4E-08 68.5 23.1 221 341-574 198-451 (635)
344 KOG4649|consensus 97.8 0.012 2.6E-07 57.0 23.3 130 347-484 23-153 (354)
345 cd00216 PQQ_DH Dehydrogenases 97.8 0.02 4.4E-07 63.1 29.0 184 355-552 173-434 (488)
346 PF04841 Vps16_N: Vps16, N-ter 97.8 0.02 4.3E-07 61.5 28.1 197 358-567 62-272 (410)
347 PF00930 DPPIV_N: Dipeptidyl p 97.8 0.0084 1.8E-07 63.2 24.6 243 272-530 45-347 (353)
348 PF08596 Lgl_C: Lethal giant l 97.8 0.0097 2.1E-07 63.3 24.9 248 271-528 3-324 (395)
349 PF06977 SdiA-regulated: SdiA- 97.8 0.017 3.7E-07 57.3 24.9 203 371-581 15-247 (248)
350 COG3391 Uncharacterized conser 97.8 0.059 1.3E-06 57.4 31.0 243 337-590 32-289 (381)
351 PF00780 CNH: CNH domain; Int 97.7 0.043 9.3E-07 55.4 28.0 198 336-554 36-267 (275)
352 PF03178 CPSF_A: CPSF A subuni 97.7 0.037 7.9E-07 57.5 26.6 202 324-538 12-261 (321)
353 COG0823 TolB Periplasmic compo 97.6 0.0013 2.9E-08 70.5 15.9 179 398-587 174-361 (425)
354 COG3391 Uncharacterized conser 97.6 0.044 9.5E-07 58.4 26.8 224 336-565 74-309 (381)
355 KOG3621|consensus 97.6 0.0007 1.5E-08 73.5 12.4 137 380-520 38-180 (726)
356 KOG4649|consensus 97.5 0.1 2.2E-06 50.8 27.3 137 282-448 26-165 (354)
357 PF08553 VID27: VID27 cytoplas 97.5 0.002 4.2E-08 73.2 15.8 141 348-499 494-647 (794)
358 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.5 0.19 4E-06 55.9 31.0 237 347-594 120-500 (527)
359 KOG3617|consensus 97.5 0.0014 3E-08 72.3 13.5 230 336-584 16-259 (1416)
360 PF03178 CPSF_A: CPSF A subuni 97.5 0.033 7E-07 57.9 23.3 138 289-449 62-203 (321)
361 COG3386 Gluconolactonase [Carb 97.5 0.058 1.3E-06 55.4 24.2 218 340-574 29-275 (307)
362 PF00780 CNH: CNH domain; Int 97.4 0.088 1.9E-06 53.1 24.8 224 345-591 5-262 (275)
363 smart00320 WD40 WD40 repeats. 97.3 0.00079 1.7E-08 44.1 5.6 38 545-582 3-40 (40)
364 KOG4499|consensus 97.3 0.059 1.3E-06 51.7 19.5 204 347-564 27-263 (310)
365 COG3386 Gluconolactonase [Carb 97.3 0.1 2.2E-06 53.6 23.1 187 335-529 65-274 (307)
366 COG3204 Uncharacterized protei 97.2 0.095 2.1E-06 52.1 21.2 160 335-499 85-263 (316)
367 PF02897 Peptidase_S9_N: Proly 97.1 0.56 1.2E-05 50.5 29.5 260 258-547 109-409 (414)
368 PF14783 BBS2_Mid: Ciliary BBS 97.1 0.042 9.1E-07 46.8 15.4 99 338-443 2-109 (111)
369 COG5276 Uncharacterized conser 97.1 0.35 7.6E-06 48.1 28.1 269 274-584 91-369 (370)
370 PF14655 RAB3GAP2_N: Rab3 GTPa 97.1 0.48 1E-05 50.5 26.5 88 461-551 302-407 (415)
371 PRK13616 lipoprotein LpqB; Pro 97.0 0.026 5.6E-07 63.3 17.8 152 419-585 350-526 (591)
372 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.0 0.82 1.8E-05 50.9 29.6 61 491-553 441-501 (527)
373 KOG4640|consensus 97.0 0.0034 7.4E-08 67.6 9.5 93 335-428 20-115 (665)
374 PHA02713 hypothetical protein; 96.9 0.057 1.2E-06 60.5 19.3 217 358-587 273-536 (557)
375 smart00320 WD40 WD40 repeats. 96.9 0.0029 6.3E-08 41.2 5.5 37 410-446 4-40 (40)
376 PF14783 BBS2_Mid: Ciliary BBS 96.9 0.068 1.5E-06 45.5 14.6 93 275-400 8-109 (111)
377 COG3490 Uncharacterized protei 96.8 0.36 7.7E-06 47.8 21.0 114 388-506 81-216 (366)
378 PF08553 VID27: VID27 cytoplas 96.8 0.033 7.2E-07 63.5 16.3 139 394-541 501-646 (794)
379 KOG4640|consensus 96.8 0.0058 1.3E-07 65.9 9.5 93 418-520 20-115 (665)
380 KOG4441|consensus 96.8 0.096 2.1E-06 58.7 19.5 206 324-542 311-546 (571)
381 KOG4441|consensus 96.8 0.12 2.6E-06 57.9 20.2 230 346-586 284-548 (571)
382 PRK13616 lipoprotein LpqB; Pro 96.7 0.23 5E-06 55.8 21.6 180 379-579 351-563 (591)
383 PF14727 PHTB1_N: PTHB1 N-term 96.7 1.2 2.6E-05 47.6 28.9 273 281-588 39-364 (418)
384 KOG2395|consensus 96.6 0.032 7E-07 59.2 13.2 143 345-499 343-500 (644)
385 KOG1897|consensus 96.6 2 4.4E-05 49.3 30.7 113 470-587 778-901 (1096)
386 PF14583 Pectate_lyase22: Olig 96.6 1.3 2.7E-05 46.5 26.9 229 337-575 37-303 (386)
387 PF05096 Glu_cyclase_2: Glutam 96.6 0.95 2.1E-05 45.0 24.1 192 259-485 34-249 (264)
388 KOG2079|consensus 96.5 0.029 6.3E-07 64.1 12.9 92 282-399 102-199 (1206)
389 KOG3630|consensus 96.5 0.031 6.6E-07 64.2 13.0 147 335-486 100-263 (1405)
390 PF07995 GSDH: Glucose / Sorbo 96.5 1.3 2.8E-05 46.1 29.7 235 337-579 3-330 (331)
391 PF05694 SBP56: 56kDa selenium 96.3 0.46 1E-05 50.2 19.6 193 388-588 88-346 (461)
392 PRK10115 protease 2; Provision 96.3 2.9 6.3E-05 48.1 31.6 241 337-587 128-397 (686)
393 PHA02713 hypothetical protein; 96.3 0.14 3.1E-06 57.3 17.2 146 346-502 351-536 (557)
394 COG3204 Uncharacterized protei 96.3 0.75 1.6E-05 45.9 19.7 180 245-449 61-264 (316)
395 PF12894 Apc4_WD40: Anaphase-p 96.0 0.024 5.2E-07 40.5 5.9 35 334-369 10-44 (47)
396 KOG2444|consensus 95.9 0.018 3.9E-07 55.0 6.4 102 347-449 70-178 (238)
397 PF15390 DUF4613: Domain of un 95.9 0.2 4.3E-06 54.3 14.6 152 377-542 19-186 (671)
398 PF14870 PSII_BNR: Photosynthe 95.7 2.9 6.2E-05 42.8 28.6 233 269-539 61-301 (302)
399 PF10168 Nup88: Nuclear pore c 95.6 2.3 5E-05 48.8 23.0 95 334-450 83-181 (717)
400 KOG2395|consensus 95.6 0.26 5.7E-06 52.6 14.1 121 324-448 366-500 (644)
401 KOG3630|consensus 95.5 0.17 3.7E-06 58.4 13.0 149 420-573 102-262 (1405)
402 KOG1897|consensus 95.5 2 4.2E-05 49.5 21.0 152 337-499 776-942 (1096)
403 PRK10115 protease 2; Provision 95.5 6.5 0.00014 45.3 33.0 248 257-545 111-397 (686)
404 TIGR03074 PQQ_membr_DH membran 95.4 3.8 8.3E-05 47.5 24.0 201 347-550 194-485 (764)
405 PF05694 SBP56: 56kDa selenium 95.4 3.3 7.1E-05 44.0 21.2 183 342-529 136-392 (461)
406 PHA03098 kelch-like protein; P 95.4 0.58 1.3E-05 52.3 17.3 191 381-586 289-513 (534)
407 KOG2079|consensus 95.3 0.056 1.2E-06 61.9 8.4 112 376-498 88-202 (1206)
408 TIGR02604 Piru_Ver_Nterm putat 95.2 4.9 0.00011 42.5 24.8 141 336-485 14-201 (367)
409 PF10647 Gmad1: Lipoprotein Lp 95.1 3.9 8.6E-05 40.8 22.7 155 336-495 24-192 (253)
410 PHA03098 kelch-like protein; P 95.1 0.66 1.4E-05 51.8 16.6 150 345-503 293-468 (534)
411 KOG2444|consensus 95.1 0.03 6.5E-07 53.5 4.8 103 481-587 72-180 (238)
412 TIGR03118 PEPCTERM_chp_1 conse 95.0 4.6 0.0001 40.8 25.1 218 337-564 24-307 (336)
413 PF15390 DUF4613: Domain of un 94.9 2.1 4.4E-05 46.8 18.1 170 336-520 20-212 (671)
414 KOG1916|consensus 94.9 0.032 7E-07 62.5 4.9 136 335-504 180-328 (1283)
415 PF12234 Rav1p_C: RAVE protein 94.9 1 2.2E-05 50.4 16.5 117 330-448 23-156 (631)
416 COG5276 Uncharacterized conser 94.8 4.8 0.00011 40.3 24.6 196 377-586 86-287 (370)
417 TIGR03074 PQQ_membr_DH membran 94.8 7.9 0.00017 45.0 24.0 154 430-591 260-484 (764)
418 PF12657 TFIIIC_delta: Transcr 94.7 0.15 3.1E-06 47.9 8.4 96 271-366 6-122 (173)
419 COG3490 Uncharacterized protei 94.6 2.9 6.4E-05 41.6 17.0 158 340-507 118-318 (366)
420 PF12234 Rav1p_C: RAVE protein 94.5 1.1 2.4E-05 50.1 15.6 110 420-541 31-155 (631)
421 TIGR02604 Piru_Ver_Nterm putat 94.4 1.6 3.5E-05 46.2 16.4 148 419-575 14-204 (367)
422 PRK13684 Ycf48-like protein; P 94.3 8 0.00017 40.3 30.4 151 418-583 172-330 (334)
423 PF05096 Glu_cyclase_2: Glutam 94.2 6.5 0.00014 39.2 26.7 188 327-528 34-248 (264)
424 KOG4499|consensus 94.0 3.5 7.5E-05 39.9 15.6 140 335-483 108-270 (310)
425 PF12894 Apc4_WD40: Anaphase-p 94.0 0.19 4E-06 35.9 5.5 31 554-584 11-41 (47)
426 PHA02790 Kelch-like protein; P 93.8 2.9 6.3E-05 46.0 17.5 145 345-501 317-472 (480)
427 PF10395 Utp8: Utp8 family; I 93.7 15 0.00032 41.5 26.9 163 333-508 127-314 (670)
428 KOG2280|consensus 93.7 2.7 5.8E-05 47.1 16.3 181 357-551 64-255 (829)
429 COG5167 VID27 Protein involved 93.3 1.6 3.5E-05 46.6 13.2 143 344-499 476-632 (776)
430 PF14761 HPS3_N: Hermansky-Pud 93.1 7.7 0.00017 37.3 16.5 109 388-501 29-165 (215)
431 PF14870 PSII_BNR: Photosynthe 93.0 12 0.00026 38.3 30.4 226 337-581 63-301 (302)
432 PF10647 Gmad1: Lipoprotein Lp 92.8 11 0.00024 37.5 22.6 143 379-529 25-184 (253)
433 PF10168 Nup88: Nuclear pore c 92.5 3.2 7E-05 47.7 15.6 35 553-587 145-182 (717)
434 TIGR03548 mutarot_permut cycli 92.3 15 0.00033 37.9 19.8 104 346-450 72-196 (323)
435 KOG2377|consensus 92.3 4.6 0.0001 42.7 14.8 152 381-539 26-182 (657)
436 KOG4460|consensus 92.2 3.3 7.2E-05 44.5 13.9 93 336-450 104-200 (741)
437 PRK13684 Ycf48-like protein; P 91.9 18 0.00039 37.7 28.1 151 377-540 172-329 (334)
438 KOG2280|consensus 91.7 8.7 0.00019 43.3 16.8 173 271-478 85-271 (829)
439 PHA02790 Kelch-like protein; P 91.5 8.3 0.00018 42.5 17.1 186 385-586 270-472 (480)
440 PF10395 Utp8: Utp8 family; I 91.1 31 0.00068 39.0 22.7 161 377-550 129-313 (670)
441 KOG2377|consensus 90.9 3.6 7.8E-05 43.5 12.3 115 334-449 65-186 (657)
442 PRK14131 N-acetylneuraminic ac 90.8 22 0.00047 37.7 18.9 92 346-439 38-149 (376)
443 KOG2247|consensus 90.7 0.04 8.6E-07 58.0 -1.9 142 422-576 38-180 (615)
444 PF07569 Hira: TUP1-like enhan 90.2 2.1 4.5E-05 41.8 9.6 71 379-450 14-97 (219)
445 KOG2247|consensus 89.9 0.1 2.2E-06 55.2 0.2 231 336-585 35-281 (615)
446 KOG1916|consensus 89.8 0.37 8E-06 54.5 4.4 94 373-476 128-234 (1283)
447 KOG1983|consensus 89.7 8.9 0.00019 45.9 16.1 230 336-588 36-268 (993)
448 PF08728 CRT10: CRT10; InterP 89.6 19 0.00042 41.0 17.6 112 468-583 102-245 (717)
449 KOG1898|consensus 88.9 56 0.0012 38.6 29.3 102 492-596 854-974 (1205)
450 PF08728 CRT10: CRT10; InterP 88.6 2.5 5.4E-05 47.9 9.9 127 271-404 102-245 (717)
451 TIGR03547 muta_rot_YjhT mutatr 88.6 34 0.00073 35.7 20.9 91 347-439 18-128 (346)
452 KOG4659|consensus 88.3 68 0.0015 38.8 21.8 50 249-298 327-385 (1899)
453 PF10214 Rrn6: RNA polymerase 88.0 62 0.0013 38.0 23.6 164 416-586 77-278 (765)
454 PF07569 Hira: TUP1-like enhan 87.7 3.1 6.7E-05 40.5 8.9 73 426-502 18-98 (219)
455 PF14655 RAB3GAP2_N: Rab3 GTPa 87.4 8.6 0.00019 41.2 12.6 90 413-509 302-408 (415)
456 PF14727 PHTB1_N: PTHB1 N-term 87.3 46 0.00099 35.8 28.2 220 347-582 37-316 (418)
457 PLN02153 epithiospecifier prot 87.3 40 0.00087 35.1 19.0 62 346-407 85-169 (341)
458 TIGR03548 mutarot_permut cycli 87.2 39 0.00084 34.8 20.2 114 381-502 67-197 (323)
459 PLN00033 photosystem II stabil 87.1 46 0.001 35.6 31.9 145 421-581 241-396 (398)
460 PF10313 DUF2415: Uncharacteri 86.7 3.1 6.7E-05 29.0 5.8 32 467-500 1-34 (43)
461 PF14781 BBS2_N: Ciliary BBSom 86.2 23 0.00051 31.4 13.5 108 384-503 5-129 (136)
462 PF14781 BBS2_N: Ciliary BBSom 86.2 24 0.00051 31.3 13.8 118 424-547 4-130 (136)
463 TIGR02276 beta_rpt_yvtn 40-res 86.0 3.2 7E-05 28.1 5.9 41 476-518 1-41 (42)
464 PLN02193 nitrile-specifier pro 85.5 32 0.0007 37.7 16.5 101 346-450 228-353 (470)
465 PF10313 DUF2415: Uncharacteri 85.5 3.3 7.2E-05 28.8 5.5 31 336-366 1-34 (43)
466 COG4590 ABC-type uncharacteriz 85.2 8.3 0.00018 40.8 10.7 159 334-504 219-391 (733)
467 KOG4460|consensus 85.1 23 0.0005 38.4 14.0 34 556-589 167-203 (741)
468 KOG1900|consensus 84.8 8.8 0.00019 45.8 11.8 140 437-588 96-276 (1311)
469 smart00036 CNH Domain found in 84.6 51 0.0011 33.8 28.6 233 282-552 15-280 (302)
470 PF02333 Phytase: Phytase; In 83.7 63 0.0014 34.2 22.4 186 388-586 69-292 (381)
471 PRK14131 N-acetylneuraminic ac 83.6 64 0.0014 34.1 20.5 51 346-396 84-149 (376)
472 COG1520 FOG: WD40-like repeat 83.2 65 0.0014 33.9 29.0 159 346-510 111-279 (370)
473 TIGR03118 PEPCTERM_chp_1 conse 83.2 57 0.0012 33.2 24.0 223 264-520 20-307 (336)
474 PLN02193 nitrile-specifier pro 82.7 80 0.0017 34.6 18.8 102 346-450 278-412 (470)
475 PF03088 Str_synth: Strictosid 82.6 14 0.0003 30.4 9.0 43 488-530 34-76 (89)
476 PLN02153 epithiospecifier prot 82.3 66 0.0014 33.4 19.9 22 429-450 85-111 (341)
477 COG1520 FOG: WD40-like repeat 82.0 72 0.0016 33.6 23.6 194 349-553 70-279 (370)
478 PLN00033 photosystem II stabil 81.9 78 0.0017 33.9 26.7 112 417-539 279-396 (398)
479 PF11635 Med16: Mediator compl 81.5 1.2E+02 0.0025 35.6 20.0 73 419-494 260-345 (753)
480 PF02333 Phytase: Phytase; In 81.3 78 0.0017 33.5 26.6 190 346-543 67-291 (381)
481 COG3823 Glutamine cyclotransfe 81.2 37 0.00081 32.5 12.3 131 353-485 107-247 (262)
482 PF11715 Nup160: Nucleoporin N 80.6 27 0.00058 39.1 13.7 31 420-450 216-250 (547)
483 COG5167 VID27 Protein involved 80.5 18 0.0004 39.0 11.2 62 386-449 572-633 (776)
484 PF13449 Phytase-like: Esteras 80.5 76 0.0016 32.9 17.8 164 419-586 20-251 (326)
485 COG3292 Predicted periplasmic 80.2 1E+02 0.0022 34.1 18.6 270 268-580 163-443 (671)
486 TIGR03032 conserved hypothetic 79.8 77 0.0017 32.5 14.9 48 346-394 212-259 (335)
487 PF12768 Rax2: Cortical protei 78.0 37 0.00081 34.4 12.4 117 396-520 15-146 (281)
488 PF11635 Med16: Mediator compl 77.9 1.5E+02 0.0032 34.8 25.6 110 468-579 182-345 (753)
489 COG5290 IkappaB kinase complex 77.4 1.2E+02 0.0025 35.0 16.5 95 423-525 251-351 (1243)
490 PF12768 Rax2: Cortical protei 76.9 43 0.00094 33.9 12.5 90 289-405 16-123 (281)
491 PF10214 Rrn6: RNA polymerase 76.6 1.6E+02 0.0035 34.5 28.1 116 419-543 146-277 (765)
492 PF07995 GSDH: Glucose / Sorbo 76.4 1E+02 0.0022 32.0 26.9 232 273-536 5-329 (331)
493 TIGR03547 muta_rot_YjhT mutatr 76.2 1E+02 0.0022 32.0 21.3 51 346-396 63-128 (346)
494 KOG1900|consensus 76.0 41 0.0009 40.5 13.4 139 354-500 96-273 (1311)
495 PF08801 Nucleoporin_N: Nup133 75.9 37 0.00079 36.6 12.6 31 419-449 190-220 (422)
496 PF12657 TFIIIC_delta: Transcr 75.6 17 0.00037 33.8 8.7 31 556-586 87-123 (173)
497 KOG4659|consensus 74.5 2.2E+02 0.0047 34.9 20.7 21 463-483 658-678 (1899)
498 PF13449 Phytase-like: Esteras 74.4 1.1E+02 0.0024 31.6 22.4 107 420-527 86-231 (326)
499 PF10433 MMS1_N: Mono-function 74.3 1.4E+02 0.0031 32.9 23.7 255 278-564 221-503 (504)
500 KOG2714|consensus 74.2 91 0.002 33.2 13.9 126 348-502 236-374 (465)
No 1
>KOG0305|consensus
Probab=100.00 E-value=4.1e-57 Score=471.49 Aligned_cols=314 Identities=56% Similarity=1.020 Sum_probs=300.0
Q ss_pred CCCCccccCCCccccccCCccCCceeEEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccc
Q psy4876 246 SKPTSRYIPLTADRILDAPEIQNDYYLNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRA 325 (609)
Q Consensus 246 ~~~~~r~i~~~p~~il~ap~~~~~~~v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (609)
+++..|++++.|.++||+|++.+|||.+.++|+..++||++.+..||+|+..+ +.
T Consensus 154 ~r~~~r~~~~~p~rvLDaP~l~dDfY~nlldWss~n~laValg~~vylW~~~s-------------------------~~ 208 (484)
T KOG0305|consen 154 PRKLKRKIPQTPYRVLDAPGLQDDFYLNLLDWSSANVLAVALGQSVYLWSASS-------------------------GS 208 (484)
T ss_pred cccccCcccCChhhhccCCcccccHhhhHhhcccCCeEEEEecceEEEEecCC-------------------------Cc
Confidence 56678999999999999999999999999999999999999999999999999 88
Q ss_pred eeeeeeecCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecC-CCCceEEEEecCCEEEEEecCCeEEEEEc
Q psy4876 326 IDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDG-HDVRVGALAWNTYILSSGSRCGNIVHHDV 404 (609)
Q Consensus 326 ~~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~l~~~~~~L~sgs~dg~I~iwd~ 404 (609)
+..+.++. ...|+++.|+++|.+||+|..+|.|.|||..+.+.++.+.+ |..+|.+++|++..+.+|+.||.|.++|+
T Consensus 209 v~~l~~~~-~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dv 287 (484)
T KOG0305|consen 209 VTELCSFG-EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDV 287 (484)
T ss_pred eEEeEecC-CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEE
Confidence 88888884 89999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEE
Q psy4876 405 RSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLAS 484 (609)
Q Consensus 405 ~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llas 484 (609)
+..++....+.+|.++||+++|++|+.+||+|++|+.|.|||.... .++..+..|.++|.+++|||....+||+
T Consensus 288 R~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~------~p~~~~~~H~aAVKA~awcP~q~~lLAs 361 (484)
T KOG0305|consen 288 RISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP------EPKFTFTEHTAAVKALAWCPWQSGLLAT 361 (484)
T ss_pred ecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCc------cccEEEeccceeeeEeeeCCCccCceEE
Confidence 9987666678899999999999999999999999999999999665 7889999999999999999999999999
Q ss_pred EeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeC
Q psy4876 485 GGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSP 564 (609)
Q Consensus 485 ggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~sp 564 (609)
|||+.|++|++||+.+|+.+..+...++|+++.|++.+++|++++|+.++.|.||++++...+..+.+|..+|.+++++|
T Consensus 362 GGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SP 441 (484)
T KOG0305|consen 362 GGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSP 441 (484)
T ss_pred cCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEECCCCEEEEEcCCCccchh
Q psy4876 565 DETTVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 565 dg~~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
||..|++|+.|++++||++++..+...
T Consensus 442 dg~~i~t~a~DETlrfw~~f~~~~~~~ 468 (484)
T KOG0305|consen 442 DGETIVTGAADETLRFWNLFDERPKST 468 (484)
T ss_pred CCCEEEEecccCcEEeccccCCCCccc
Confidence 999999999999999999999744433
No 2
>KOG0271|consensus
Probab=100.00 E-value=4.6e-41 Score=328.42 Aligned_cols=279 Identities=28% Similarity=0.527 Sum_probs=248.0
Q ss_pred eeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
-.|-|+.|+|++ +++++.|.++++||+.+ .. ++.+.. |...|.||+|+||
T Consensus 116 e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~T-------------------------eT--p~~t~KgH~~WVlcvawsPD 168 (480)
T KOG0271|consen 116 EAVLSVQFSPTGSRLVTGSGDTTVRLWDLDT-------------------------ET--PLFTCKGHKNWVLCVAWSPD 168 (480)
T ss_pred CcEEEEEecCCCceEEecCCCceEEeeccCC-------------------------CC--cceeecCCccEEEEEEECCC
Confidence 347889999986 78899999999999988 33 455566 9999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCee-EEEecCCCCceEEEEec-------CCEEEEEecCCeEEEEEcCCCCeeEEEEccCC
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKK-CRTMDGHDVRVGALAWN-------TYILSSGSRCGNIVHHDVRSRDHKVALLQNHT 418 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~-~~~l~~h~~~V~~l~~~-------~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~ 418 (609)
|+.||+|+.||+|++||..+|++ .+.+.+|...|++++|. ..+|++++.||.|+|||+..+ ..+..+.+|+
T Consensus 169 gk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~-~~~~~lsgHT 247 (480)
T KOG0271|consen 169 GKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLG-TCVRTLSGHT 247 (480)
T ss_pred cchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCc-eEEEEeccCc
Confidence 99999999999999999998865 46899999999999993 368999999999999999987 5889999999
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCC----------------------------------------------
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQH---------------------------------------------- 452 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~---------------------------------------------- 452 (609)
..|+|+.|--+| +|++|+.|++|++|+...|..
T Consensus 248 ~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~ 326 (480)
T KOG0271|consen 248 ASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALE 326 (480)
T ss_pred cceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHH
Confidence 999999998766 899999999999999765420
Q ss_pred ---------------------------CCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE
Q psy4876 453 ---------------------------TFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD 505 (609)
Q Consensus 453 ---------------------------~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~ 505 (609)
....+++..+.+|+.-|..+.|+||+ .++|++ +.|+.|++||.++|+.+.
T Consensus 327 rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~-r~IASa--SFDkSVkLW~g~tGk~la 403 (480)
T KOG0271|consen 327 RYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDG-RYIASA--SFDKSVKLWDGRTGKFLA 403 (480)
T ss_pred HHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCc-cEEEEe--ecccceeeeeCCCcchhh
Confidence 01124566778899999999999998 577776 599999999999999999
Q ss_pred EEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEE
Q psy4876 506 SIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWK 582 (609)
Q Consensus 506 ~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWd 582 (609)
++.+| ..|..++|+.|.++|++ |+.|.++++|++++.+....+.||.+.|.++.|+|||..+++|+.|..+++|.
T Consensus 404 sfRGHv~~VYqvawsaDsRLlVS--~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 404 SFRGHVAAVYQVAWSADSRLLVS--GSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred hhhhccceeEEEEeccCccEEEE--cCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 99966 68999999999999999 56999999999999999999999999999999999999999999999999995
No 3
>KOG0272|consensus
Probab=100.00 E-value=3.7e-40 Score=326.30 Aligned_cols=284 Identities=24% Similarity=0.415 Sum_probs=258.9
Q ss_pred cccCCccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCC
Q psy4876 260 ILDAPEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNE 336 (609)
Q Consensus 260 il~ap~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~ 336 (609)
.|....+.++..|..+.||.++ +++++.+|.++||+..+ . ..++.+. |.+
T Consensus 166 ~l~~SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~-------------------------~--~~~~~l~gH~~ 218 (459)
T KOG0272|consen 166 ELVCSQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQ-------------------------C--NLLQTLRGHTS 218 (459)
T ss_pred hhhhhhccCCCcceeeEeecCCCeEEEeecCCceeEeecCC-------------------------c--ceeEEEecccc
Confidence 3444556667778889999986 77799999999999976 3 5667777 999
Q ss_pred CeEEEEEccC--CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 337 NVCSVAWIQE--GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 337 ~V~~v~~spd--g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
.|.++.|+|. +..||+|+.||+|++|++.+...+..+.+|..+|..++| +|++|.+++.|.+-++||+++. ..+.
T Consensus 219 ~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk-~ElL 297 (459)
T KOG0272|consen 219 RVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETK-SELL 297 (459)
T ss_pred ceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccc-hhhH
Confidence 9999999997 579999999999999999999999999999999999999 5899999999999999999997 4677
Q ss_pred EEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCe
Q psy4876 413 LLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRH 492 (609)
Q Consensus 413 ~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~ 492 (609)
...+|...|.+++|++||.++++|+.|..-+|||++++ .++..+.+|..+|.+|+|+|+| +.+++|+ .|++
T Consensus 298 ~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtg------r~im~L~gH~k~I~~V~fsPNG-y~lATgs--~Dnt 368 (459)
T KOG0272|consen 298 LQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTG------RCIMFLAGHIKEILSVAFSPNG-YHLATGS--SDNT 368 (459)
T ss_pred hhcccccccceeEecCCCceeeccCccchhheeecccC------cEEEEecccccceeeEeECCCc-eEEeecC--CCCc
Confidence 78899999999999999999999999999999999999 8999999999999999999998 7888874 8999
Q ss_pred EEEEECCCCceeEEEcCCC-CeEEEEEcC-CCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEE
Q psy4876 493 IYFWNVSSGACLDSIDTKS-QVCALLWNS-DYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVL 570 (609)
Q Consensus 493 I~iwd~~t~~~~~~~~~~~-~v~sl~~s~-~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~ 570 (609)
++|||++...++..+..|. -|+.+.|+| .|.+|++++ .|++++||...++.+++.+.||++.|.++.+++|+.+++
T Consensus 369 ~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Tas--yD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~ 446 (459)
T KOG0272|consen 369 CKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTAS--YDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIA 446 (459)
T ss_pred EEEeeecccccceecccccchhhheEecccCCeEEEEcc--cCcceeeecCCCcccchhhcCCccceEEEEeccCCceEE
Confidence 9999999999999998775 789999998 566677643 799999999999999999999999999999999999999
Q ss_pred EEECCCCEEEEE
Q psy4876 571 SAGADETLRLWK 582 (609)
Q Consensus 571 s~s~Dg~I~iWd 582 (609)
|++.|.++++|.
T Consensus 447 t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 447 TSSFDRTIKLWR 458 (459)
T ss_pred EeccCceeeecc
Confidence 999999999995
No 4
>KOG0286|consensus
Probab=100.00 E-value=3.3e-38 Score=299.38 Aligned_cols=282 Identities=21% Similarity=0.415 Sum_probs=255.5
Q ss_pred ccccCCccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCC
Q psy4876 259 RILDAPEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNE 336 (609)
Q Consensus 259 ~il~ap~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~ 336 (609)
++|..+ .-.|.+++|++|. +++++.||.+.|||.-+ ........+ ...
T Consensus 49 r~LkGH----~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~T-------------------------tnK~haipl-~s~ 98 (343)
T KOG0286|consen 49 RTLKGH----LNKIYAMDWSTDSRRIVSASQDGKLIVWDSFT-------------------------TNKVHAIPL-PSS 98 (343)
T ss_pred EEeccc----ccceeeeEecCCcCeEEeeccCCeEEEEEccc-------------------------ccceeEEec-Cce
Confidence 555543 3358899999985 88999999999999988 554444444 678
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCC------eeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCe
Q psy4876 337 NVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK------KKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~------~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
.|..++|+|.|+++|.|+-|....||++.+. ...+.+.+|.+-+.|+.| +...|++++.|.++.+||++++ +
T Consensus 99 WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g-~ 177 (343)
T KOG0286|consen 99 WVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETG-Q 177 (343)
T ss_pred eEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccc-e
Confidence 9999999999999999999999999999854 456789999999999999 7788899999999999999998 5
Q ss_pred eEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 410 KVALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs 488 (609)
.+..+.+|.+.|.+|+++| +++.|++|+-|+..++||++.+ ..++.|.+|...|.++.|.|+| .-+++| +
T Consensus 178 ~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~------~c~qtF~ghesDINsv~ffP~G-~afatG--S 248 (343)
T KOG0286|consen 178 QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG------QCVQTFEGHESDINSVRFFPSG-DAFATG--S 248 (343)
T ss_pred EEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc------ceeEeecccccccceEEEccCC-Ceeeec--C
Confidence 8899999999999999999 9999999999999999999998 8999999999999999999998 566775 6
Q ss_pred CCCeEEEEECCCCceeEEEcCC---CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCC
Q psy4876 489 ADRHIYFWNVSSGACLDSIDTK---SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPD 565 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~~~~~~~~~---~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spd 565 (609)
.|++.++||++....+..+.+. ..|++++|+..|++|++ |+.|..+.+||.-.++.+..|.+|..+|.++..+||
T Consensus 249 DD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfa--gy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~D 326 (343)
T KOG0286|consen 249 DDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFA--GYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPD 326 (343)
T ss_pred CCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEe--eecCCceeEeeccccceEEEeeccCCeeEEEEECCC
Confidence 9999999999999998888765 38999999999999999 779999999999999999999999999999999999
Q ss_pred CCEEEEEECCCCEEEEE
Q psy4876 566 ETTVLSAGADETLRLWK 582 (609)
Q Consensus 566 g~~L~s~s~Dg~I~iWd 582 (609)
|.-|+||+.|.+||||.
T Consensus 327 G~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 327 GMAVATGSWDSTLRIWA 343 (343)
T ss_pred CcEEEecchhHheeecC
Confidence 99999999999999994
No 5
>KOG0271|consensus
Probab=100.00 E-value=2.9e-37 Score=301.89 Aligned_cols=249 Identities=28% Similarity=0.440 Sum_probs=223.8
Q ss_pred eeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEc
Q psy4876 328 HLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDV 404 (609)
Q Consensus 328 ~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~ 404 (609)
+...+. |.+.|.|++|+|+|..||+|+.|.++++||+.+.....+.++|...|.|++| ++..|++|+.||+|.+||.
T Consensus 107 CssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdp 186 (480)
T KOG0271|consen 107 CSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDP 186 (480)
T ss_pred eccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecC
Confidence 344556 9999999999999999999999999999999999999999999999999999 7899999999999999999
Q ss_pred CCCCeeEEEEccCCCCeEEEEEcc-----CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCC
Q psy4876 405 RSRDHKVALLQNHTQEVCGLKWSP-----DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSP 479 (609)
Q Consensus 405 ~~~~~~~~~~~~h~~~V~~l~~sp-----dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 479 (609)
.+++.....+.+|...|++++|.| ..++||+++.||.|+|||+..+ .++..+.+|..+|+|+.|-.+
T Consensus 187 ktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~------~~~~~lsgHT~~VTCvrwGG~-- 258 (480)
T KOG0271|consen 187 KTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLG------TCVRTLSGHTASVTCVRWGGE-- 258 (480)
T ss_pred CCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCc------eEEEEeccCccceEEEEEcCC--
Confidence 999888899999999999999976 5779999999999999999988 889999999999999999754
Q ss_pred cEEEEEeccCCCeEEEEECCCCceeEEE----------------------------------------------------
Q psy4876 480 NVLASGGGTADRHIYFWNVSSGACLDSI---------------------------------------------------- 507 (609)
Q Consensus 480 ~llasggGs~Dg~I~iwd~~t~~~~~~~---------------------------------------------------- 507 (609)
.++++| +.|++|++|+...|.+...+
T Consensus 259 gliySg--S~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~ 336 (480)
T KOG0271|consen 259 GLIYSG--SQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSG 336 (480)
T ss_pred ceEEec--CCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCc
Confidence 488886 69999999998765321111
Q ss_pred ---------------------------c-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEE
Q psy4876 508 ---------------------------D-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLN 559 (609)
Q Consensus 508 ---------------------------~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~ 559 (609)
. +..-|..+.|+||++++++++ -|..|++|+..+|+.+..|+||-+.|..
T Consensus 337 erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaS--FDkSVkLW~g~tGk~lasfRGHv~~VYq 414 (480)
T KOG0271|consen 337 ERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASAS--FDKSVKLWDGRTGKFLASFRGHVAAVYQ 414 (480)
T ss_pred ceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEee--cccceeeeeCCCcchhhhhhhccceeEE
Confidence 0 112478899999999999965 7999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 560 LAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 560 l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
++|+.|.++|++|+.|.++++|++.+.+.
T Consensus 415 vawsaDsRLlVS~SkDsTLKvw~V~tkKl 443 (480)
T KOG0271|consen 415 VAWSADSRLLVSGSKDSTLKVWDVRTKKL 443 (480)
T ss_pred EEeccCccEEEEcCCCceEEEEEeeeeee
Confidence 99999999999999999999999987654
No 6
>KOG0279|consensus
Probab=100.00 E-value=3.2e-35 Score=277.62 Aligned_cols=278 Identities=23% Similarity=0.344 Sum_probs=239.4
Q ss_pred eEEEEEecCC---CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 271 YLNLIDWSHF---NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 271 ~v~~l~wsp~---~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
.|..++-.+. -++.++.|.++.+|++.... .. .|. .+..+. |...|..+..++|
T Consensus 17 ~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd-~~-------------------~G~--~~r~~~GHsH~v~dv~~s~d 74 (315)
T KOG0279|consen 17 WVTALAIKIKNSDILVSASRDKTIIVWKLTSDD-IK-------------------YGV--PVRRLTGHSHFVSDVVLSSD 74 (315)
T ss_pred eEEEEEeecCCCceEEEcccceEEEEEEeccCc-cc-------------------cCc--eeeeeeccceEecceEEccC
Confidence 4666666654 37789999999999998721 10 033 344555 8999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEcc--CCCCeE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQN--HTQEVC 422 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~--h~~~V~ 422 (609)
|++.++++.|+.+++||+.+++..+.|.+|...|.+++| +...+++|++|.+|.+|++-.. +..++.. |..-|.
T Consensus 75 g~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~--ck~t~~~~~~~~WVs 152 (315)
T KOG0279|consen 75 GNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV--CKYTIHEDSHREWVS 152 (315)
T ss_pred CceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc--EEEEEecCCCcCcEE
Confidence 999999999999999999999999999999999999999 5689999999999999999865 3333333 378999
Q ss_pred EEEEccC--CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC
Q psy4876 423 GLKWSPD--GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 423 ~l~~spd--g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t 500 (609)
|+.|+|+ ..+|++++.|++|++||+++. +....+.+|.+.++.++++||| .+.++|| .||.+.+||++.
T Consensus 153 cvrfsP~~~~p~Ivs~s~DktvKvWnl~~~------~l~~~~~gh~~~v~t~~vSpDG-slcasGg--kdg~~~LwdL~~ 223 (315)
T KOG0279|consen 153 CVRFSPNESNPIIVSASWDKTVKVWNLRNC------QLRTTFIGHSGYVNTVTVSPDG-SLCASGG--KDGEAMLWDLNE 223 (315)
T ss_pred EEEEcCCCCCcEEEEccCCceEEEEccCCc------chhhccccccccEEEEEECCCC-CEEecCC--CCceEEEEEccC
Confidence 9999997 779999999999999999988 7788899999999999999999 5888875 999999999999
Q ss_pred CceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC----C-----CCCEEEEEEeCCCCEEEE
Q psy4876 501 GACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG----H-----SARVLNLAMSPDETTVLS 571 (609)
Q Consensus 501 ~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~----h-----~~~V~~l~~spdg~~L~s 571 (609)
++++.++++...|.+++|+|+...|+.+. +..|+|||+.+...+.++.. . .-...+++|++||..|++
T Consensus 224 ~k~lysl~a~~~v~sl~fspnrywL~~at---~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~ 300 (315)
T KOG0279|consen 224 GKNLYSLEAFDIVNSLCFSPNRYWLCAAT---ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFA 300 (315)
T ss_pred CceeEeccCCCeEeeEEecCCceeEeecc---CCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEe
Confidence 99999999999999999999999888865 56699999999988877642 2 234678899999999999
Q ss_pred EECCCCEEEEEcC
Q psy4876 572 AGADETLRLWKIF 584 (609)
Q Consensus 572 ~s~Dg~I~iWdl~ 584 (609)
|-.|+.|++|.+.
T Consensus 301 g~td~~irv~qv~ 313 (315)
T KOG0279|consen 301 GYTDNVIRVWQVA 313 (315)
T ss_pred eecCCcEEEEEee
Confidence 9999999999875
No 7
>KOG0272|consensus
Probab=100.00 E-value=1.7e-36 Score=300.24 Aligned_cols=248 Identities=20% Similarity=0.381 Sum_probs=232.3
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec----CCEEEEEecCCeEEEEEcCCCCe
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN----TYILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~----~~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
...+|..+.|+.+++.||+|+.+|.++||...+...+.++.+|...|.++.|+ +..|++++.||++++|++.+. .
T Consensus 174 d~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e-~ 252 (459)
T KOG0272|consen 174 DTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE-T 252 (459)
T ss_pred CCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC-c
Confidence 67899999999999999999999999999999999999999999999999995 358999999999999999985 6
Q ss_pred eEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 410 KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
.+..+.+|...|..++|+|+|++|++++.|.+-++||++++ ..+....+|...|.+++|++|| .++++|| .
T Consensus 253 ~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk------~ElL~QEGHs~~v~~iaf~~DG-SL~~tGG--l 323 (459)
T KOG0272|consen 253 PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETK------SELLLQEGHSKGVFSIAFQPDG-SLAATGG--L 323 (459)
T ss_pred chhhhhcchhhheeeeecCCCceeeecccccchhhcccccc------hhhHhhcccccccceeEecCCC-ceeeccC--c
Confidence 89999999999999999999999999999999999999998 6777888999999999999999 5888875 8
Q ss_pred CCeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeC-CCC
Q psy4876 490 DRHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSP-DET 567 (609)
Q Consensus 490 Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~ 567 (609)
|..-+|||+++|.++..+.+|. +|.++.|+|+|..+++ |+.|++++|||++....+..+.+|.+-|+.|.|+| .|.
T Consensus 324 D~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lAT--gs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~ 401 (459)
T KOG0272|consen 324 DSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLAT--GSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGY 401 (459)
T ss_pred cchhheeecccCcEEEEecccccceeeEeECCCceEEee--cCCCCcEEEeeecccccceecccccchhhheEecccCCe
Confidence 9999999999999999999875 8999999999999999 56899999999999999999999999999999999 788
Q ss_pred EEEEEECCCCEEEEEcCCCccchhhh
Q psy4876 568 TVLSAGADETLRLWKIFEKVKSKKKE 593 (609)
Q Consensus 568 ~L~s~s~Dg~I~iWdl~~~~~~~k~~ 593 (609)
+|+|++.|++++||.-.+..+.+...
T Consensus 402 fL~TasyD~t~kiWs~~~~~~~ksLa 427 (459)
T KOG0272|consen 402 FLVTASYDNTVKIWSTRTWSPLKSLA 427 (459)
T ss_pred EEEEcccCcceeeecCCCcccchhhc
Confidence 99999999999999998888776544
No 8
>KOG0650|consensus
Probab=100.00 E-value=1.8e-36 Score=310.72 Aligned_cols=377 Identities=18% Similarity=0.294 Sum_probs=296.3
Q ss_pred CCCCCCCCCCCCCccccCCCCCCccccccccccCCCC--CCCCccHHHHHHHHHhHhcCCCCCCceEEeecCCCCCCCCC
Q psy4876 92 TPSAKSKTPSGGDRYIPNRSAIDTELSHYLLTRDENM--EDLSPSEREKRKAMSELVHGKDIQKSRVLAFQNKAPPPPDG 169 (609)
Q Consensus 92 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (609)
-||||.++|+|.++||| |.|||++.+|.. |...|++|+ .++|++++..++ .|++|. ....|.
T Consensus 287 ~paPKl~lP~heESYNP--------P~EYL~~~eE~~~we~~E~~~R~-l~F~P~ky~sLR----~VPaY~---r~irEr 350 (733)
T KOG0650|consen 287 VPAPKLALPGHEESYNP--------PEEYLFDEEEKKAWEEAEPEDRK-LNFIPQKYKSLR----KVPAYE---RSIRER 350 (733)
T ss_pred CCccccCCCCcccccCC--------chhhccCHHHhhhhhhccccccc-cccccccchhhh----cchhHH---HHHHHH
Confidence 68999999999999999 999999998877 888888888 689999999988 899999 555899
Q ss_pred ccchhhhhhhccccCCccceeeeeeeecccchhhhhhhhhhHHhhhhhhheee------eccCCcchhhhhhccCCCCCC
Q psy4876 170 YQNSLKVALNSAITSSPEMKIWKISVHQNVKSVKLCQNLFMERIFKSLEYLLF------KIKPLPHLMAIKILSNTSKTP 243 (609)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~e~~~~~~~~~~~------~~~p~p~~~~~~~~~~~~~~~ 243 (609)
|.+||+ || ||++..+.++......+++ .+.|||..+.+.+..+
T Consensus 351 FeRcLD-LY-------------------------L~PR~rK~rlniDpe~LiPkLPsp~dLrPFPt~~~lvyrGH----- 399 (733)
T KOG0650|consen 351 FERCLD-LY-------------------------LAPRVRKMRLNIDPESLIPKLPSPKDLRPFPTRCALVYRGH----- 399 (733)
T ss_pred HHHhHH-hh-------------------------hCcccccceecCCHHHhcccCCChhhcCCCcceeeeeEecc-----
Confidence 999999 99 7777777777777666665 2344444433332222
Q ss_pred CCCCCCccccCCCccccccCCccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccc
Q psy4876 244 MGSKPTSRYIPLTADRILDAPEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQ 321 (609)
Q Consensus 244 ~~~~~~~r~i~~~p~~il~ap~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (609)
.-.|.+|...|.| +++|+.||+|+||.+.+
T Consensus 400 -------------------------tg~Vr~iSvdp~G~wlasGsdDGtvriWEi~T----------------------- 431 (733)
T KOG0650|consen 400 -------------------------TGLVRSISVDPSGEWLASGSDDGTVRIWEIAT----------------------- 431 (733)
T ss_pred -------------------------CCeEEEEEecCCcceeeecCCCCcEEEEEeec-----------------------
Confidence 2347888888876 66688899999999999
Q ss_pred cccceeeeeeecCCCCeEEEEEccCC--CEEEEEeCCCeEEEEeCCCC--------------------------------
Q psy4876 322 DNRAIDHLMDLEGNENVCSVAWIQEG--YMLGVGTSLGTVQLWDVSAK-------------------------------- 367 (609)
Q Consensus 322 ~~~~~~~l~~~~h~~~V~~v~~spdg--~~Lasgs~dg~I~iwd~~~~-------------------------------- 367 (609)
+.+..... .++.|.||+|+|.+ ..||++..+. +.|.+..-|
T Consensus 432 --gRcvr~~~--~d~~I~~vaw~P~~~~~vLAvA~~~~-~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~ 506 (733)
T KOG0650|consen 432 --GRCVRTVQ--FDSEIRSVAWNPLSDLCVLAVAVGEC-VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRAS 506 (733)
T ss_pred --ceEEEEEe--ecceeEEEEecCCCCceeEEEEecCc-eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhh
Confidence 66544444 46799999999987 4555554433 433332111
Q ss_pred -----eeEEEecCCCCceEEEEec--CCEEEEEecC---CeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe
Q psy4876 368 -----KKCRTMDGHDVRVGALAWN--TYILSSGSRC---GNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGG 437 (609)
Q Consensus 368 -----~~~~~l~~h~~~V~~l~~~--~~~L~sgs~d---g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs 437 (609)
.-++..-.|...|..+.|+ |.+|++...+ ..|.|+++.... ....+....+.|.++.|+|...+|++++
T Consensus 507 ~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~-sQ~PF~kskG~vq~v~FHPs~p~lfVaT 585 (733)
T KOG0650|consen 507 LDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRK-SQSPFRKSKGLVQRVKFHPSKPYLFVAT 585 (733)
T ss_pred hhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEeccccc-ccCchhhcCCceeEEEecCCCceEEEEe
Confidence 0123334578899999995 8999988764 469999998763 4455666678899999999999999988
Q ss_pred CCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC-CceeEEEcCCC-CeEE
Q psy4876 438 NDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS-GACLDSIDTKS-QVCA 515 (609)
Q Consensus 438 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t-~~~~~~~~~~~-~v~s 515 (609)
. ..|+|||+..+ ..+..+......|..++.+|.|.++++. +.|+.+.+||+.- .++.+.+..|. .+++
T Consensus 586 q-~~vRiYdL~kq------elvKkL~tg~kwiS~msihp~GDnli~g---s~d~k~~WfDldlsskPyk~lr~H~~avr~ 655 (733)
T KOG0650|consen 586 Q-RSVRIYDLSKQ------ELVKKLLTGSKWISSMSIHPNGDNLILG---SYDKKMCWFDLDLSSKPYKTLRLHEKAVRS 655 (733)
T ss_pred c-cceEEEehhHH------HHHHHHhcCCeeeeeeeecCCCCeEEEe---cCCCeeEEEEcccCcchhHHhhhhhhhhhh
Confidence 7 78999999887 6777777788899999999999998885 5899999999984 45667777664 8999
Q ss_pred EEEcCCCCeEEEEEecCCCeEEEEECC---------CCceEEEEeCCCCC----EEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 516 LLWNSDYKELVSAHGFAQNQLIIWKYP---------SLVKVAELHGHSAR----VLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 516 l~~s~~g~~l~~~sG~~dg~I~Iwd~~---------~~~~~~~l~~h~~~----V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
++|++...++++ |+.||++.||.-. -..++..+.+|... |+++.|||...+|+++++||+|++|
T Consensus 656 Va~H~ryPLfas--~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 656 VAFHKRYPLFAS--GSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred hhhccccceeee--ecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 999999999988 5589999999632 23567888899765 9999999999999999999999998
No 9
>KOG0295|consensus
Probab=100.00 E-value=1.5e-35 Score=288.71 Aligned_cols=336 Identities=23% Similarity=0.337 Sum_probs=279.3
Q ss_pred hhhhHHhhhhhhheeeeccCCcchhhhhhccCCCCCCCCCC-CCccccCCCccccccCCccCCceeEEEEEecCCC--eE
Q psy4876 207 NLFMERIFKSLEYLLFKIKPLPHLMAIKILSNTSKTPMGSK-PTSRYIPLTADRILDAPEIQNDYYLNLIDWSHFN--VL 283 (609)
Q Consensus 207 ~~~~e~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~-~~~r~i~~~p~~il~ap~~~~~~~v~~l~wsp~~--ll 283 (609)
..++++.|.+..++...+..++..++-.--+-....|.... ....++|.+|.+--.+- ....|..+-++|+- ++
T Consensus 48 g~ll~kkwtSv~rlqKki~~Les~l~~~~~el~~g~pt~~~~~~~~wipRp~l~~~l~g---~r~~vt~v~~hp~~~~v~ 124 (406)
T KOG0295|consen 48 GGLLEKKWTSVDRLQKKIRELESKLDETGDELIAGDPTGSKRTPALWIPRPNLVQKLAG---HRSSVTRVIFHPSEALVV 124 (406)
T ss_pred cceeeccccccchhHHHHHHHHhhhcccccccccCCCCcCccChhhcCCCCCchhhhhc---cccceeeeeeccCceEEE
Confidence 45677788877777776655544432221111112232222 22345666554443322 35668889999996 33
Q ss_pred EEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy4876 284 AVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLW 362 (609)
Q Consensus 284 a~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iw 362 (609)
+++.|++|++||..+ +++ ...+. |.+.|.+|+|+..|++||+++.|=.+.+|
T Consensus 125 ~as~d~tikv~D~~t-------------------------g~~--e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LW 177 (406)
T KOG0295|consen 125 SASEDATIKVFDTET-------------------------GEL--ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLW 177 (406)
T ss_pred EecCCceEEEEEccc-------------------------hhh--hhhhhccccceeEEEEecCccEEEecCCccchhhe
Confidence 355799999999998 666 44555 88899999999999999999999999999
Q ss_pred eCCC-CeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC
Q psy4876 363 DVSA-KKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND 439 (609)
Q Consensus 363 d~~~-~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~D 439 (609)
|.++ .++++.+.+|...|.++.| .+++++++++|.+|+.|++.++ .++.++.+|..-|.-+..+.||.++|+++.|
T Consensus 178 d~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg-~cv~t~~~h~ewvr~v~v~~DGti~As~s~d 256 (406)
T KOG0295|consen 178 DFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTG-YCVKTFPGHSEWVRMVRVNQDGTIIASCSND 256 (406)
T ss_pred eHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccc-eeEEeccCchHhEEEEEecCCeeEEEecCCC
Confidence 9987 5788899999999999999 6899999999999999999998 5899999999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCC--------------CCcEEEEEeccCCCeEEEEECCCCceeE
Q psy4876 440 NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPW--------------SPNVLASGGGTADRHIYFWNVSSGACLD 505 (609)
Q Consensus 440 g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~--------------~~~llasggGs~Dg~I~iwd~~t~~~~~ 505 (609)
.+|++|-+.++ ++...+.+|+.+|.+++|.|. +..++.++ +.|++|++||+.+|.|+.
T Consensus 257 qtl~vW~~~t~------~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~--SrDktIk~wdv~tg~cL~ 328 (406)
T KOG0295|consen 257 QTLRVWVVATK------QCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSG--SRDKTIKIWDVSTGMCLF 328 (406)
T ss_pred ceEEEEEeccc------hhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEee--cccceEEEEeccCCeEEE
Confidence 99999999988 778889999999999999874 22466665 699999999999999999
Q ss_pred EEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEc
Q psy4876 506 SIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583 (609)
Q Consensus 506 ~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl 583 (609)
++.++. .|+.++|+|.|+||+++. +|++|++||+.+.+++..+..|..-|+++.|+.+-.+++||+-|.++++|.+
T Consensus 329 tL~ghdnwVr~~af~p~Gkyi~Sca--DDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 329 TLVGHDNWVRGVAFSPGGKYILSCA--DDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred EEecccceeeeeEEcCCCeEEEEEe--cCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 998764 899999999999999976 8999999999999999999999999999999999999999999999999986
No 10
>KOG0315|consensus
Probab=100.00 E-value=7e-34 Score=264.35 Aligned_cols=269 Identities=19% Similarity=0.334 Sum_probs=227.5
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEE
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQ 360 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~ 360 (609)
+++++.|.+|++|.+.+ |.+ ..++. .+..|..+...|+++.||+++. ..|+
T Consensus 13 LvsA~YDhTIRfWqa~t-------------------------G~C--~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvR 64 (311)
T KOG0315|consen 13 LVSAGYDHTIRFWQALT-------------------------GIC--SRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVR 64 (311)
T ss_pred EEeccCcceeeeeehhc-------------------------CeE--EEEEecCccceeeEEEcCCcchhhhccC-CeeE
Confidence 56689999999999988 654 44555 5788999999999999998877 6799
Q ss_pred EEeCCCCe--eEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEE
Q psy4876 361 LWDVSAKK--KCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASG 436 (609)
Q Consensus 361 iwd~~~~~--~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg 436 (609)
+||+.+++ .+.++.+|...|.++.| +|+.+++|++||+++|||++.. .......|..+|+++..+|+...|++|
T Consensus 65 lyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~--~~qR~~~~~spVn~vvlhpnQteLis~ 142 (311)
T KOG0315|consen 65 LYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL--SCQRNYQHNSPVNTVVLHPNQTELISG 142 (311)
T ss_pred EEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCc--ccchhccCCCCcceEEecCCcceEEee
Confidence 99998764 68999999999999999 7999999999999999999984 455555688999999999999999999
Q ss_pred eCCCcEEEEeCCCCCCCCCccceEee-cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCce------eEEEcC
Q psy4876 437 GNDNLLNIWSGVPGQHTFSTQPIHSL-SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC------LDSIDT 509 (609)
Q Consensus 437 s~Dg~I~iwd~~~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~------~~~~~~ 509 (609)
.++|.|++||+... .+.+.+ ......|.++...|+|..+.+. ...|..++|++-+... +..+..
T Consensus 143 dqsg~irvWDl~~~------~c~~~liPe~~~~i~sl~v~~dgsml~a~---nnkG~cyvW~l~~~~~~s~l~P~~k~~a 213 (311)
T KOG0315|consen 143 DQSGNIRVWDLGEN------SCTHELIPEDDTSIQSLTVMPDGSMLAAA---NNKGNCYVWRLLNHQTASELEPVHKFQA 213 (311)
T ss_pred cCCCcEEEEEccCC------ccccccCCCCCcceeeEEEcCCCcEEEEe---cCCccEEEEEccCCCccccceEhhheec
Confidence 99999999999876 233332 2334689999999999765554 3789999999986543 333443
Q ss_pred C-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC-ceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 510 K-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL-VKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 510 ~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~-~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
+ +.+..+.+||++++|++++ .|.+++||+..+. +.-..+.+|+..+++++||.||.+|+||+.|+.+++|++..++
T Consensus 214 h~~~il~C~lSPd~k~lat~s--sdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k 291 (311)
T KOG0315|consen 214 HNGHILRCLLSPDVKYLATCS--SDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGK 291 (311)
T ss_pred ccceEEEEEECCCCcEEEeec--CCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCc
Confidence 3 5799999999999999975 7999999999988 5556778999999999999999999999999999999999887
Q ss_pred cchh
Q psy4876 588 KSKK 591 (609)
Q Consensus 588 ~~~k 591 (609)
..+.
T Consensus 292 ~v~q 295 (311)
T KOG0315|consen 292 EVRQ 295 (311)
T ss_pred eeee
Confidence 5543
No 11
>KOG0273|consensus
Probab=100.00 E-value=1.1e-33 Score=283.53 Aligned_cols=276 Identities=23% Similarity=0.419 Sum_probs=248.8
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
.-.|++|+|+.+| ++++..||.++||+... . .+.++. |.++|.++.|+.
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G-------------------------~---l~~tl~~HkgPI~slKWnk 286 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKDG-------------------------N---LISTLGQHKGPIFSLKWNK 286 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEecCc-------------------------h---hhhhhhccCCceEEEEEcC
Confidence 4568999999987 56688899999999765 2 344555 999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEE
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGL 424 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 424 (609)
+|+||++++.||++.|||..++...+.+.-|..+-..+.| +...+++.+.||.|+|+.+... .++.++.+|..+|.+|
T Consensus 287 ~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~-~P~~t~~GH~g~V~al 365 (524)
T KOG0273|consen 287 KGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGED-RPVKTFIGHHGEVNAL 365 (524)
T ss_pred CCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCC-CcceeeecccCceEEE
Confidence 9999999999999999999999999999999999888999 7889999999999999999876 5889999999999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCC--------cEEEEEeccCCCeEEEE
Q psy4876 425 KWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSP--------NVLASGGGTADRHIYFW 496 (609)
Q Consensus 425 ~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~--------~llasggGs~Dg~I~iw 496 (609)
.|+|.|.+|++++.|++++||..... ...+.+..|...|..+.|+|.|+ ..++++ +.|++|++|
T Consensus 366 k~n~tg~LLaS~SdD~TlkiWs~~~~------~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sa--s~dstV~lw 437 (524)
T KOG0273|consen 366 KWNPTGSLLASCSDDGTLKIWSMGQS------NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASA--SFDSTVKLW 437 (524)
T ss_pred EECCCCceEEEecCCCeeEeeecCCC------cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEe--ecCCeEEEE
Confidence 99999999999999999999998877 67888999999999999998764 355665 389999999
Q ss_pred ECCCCceeEEE-cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC
Q psy4876 497 NVSSGACLDSI-DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD 575 (609)
Q Consensus 497 d~~t~~~~~~~-~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D 575 (609)
|+..+.++.++ .+..+|.+++|+|+|+++++ |..||.|+||+.++++.++.+.+ .+.|..++|+.+|..|..+-.|
T Consensus 438 dv~~gv~i~~f~kH~~pVysvafS~~g~ylAs--Gs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd 514 (524)
T KOG0273|consen 438 DVESGVPIHTLMKHQEPVYSVAFSPNGRYLAS--GSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKLGACASD 514 (524)
T ss_pred EccCCceeEeeccCCCceEEEEecCCCcEEEe--cCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCCCEEEEEecC
Confidence 99999999999 45579999999999999999 77999999999999999999875 4569999999999999999999
Q ss_pred CCEEEEEcC
Q psy4876 576 ETLRLWKIF 584 (609)
Q Consensus 576 g~I~iWdl~ 584 (609)
+.+++-|+.
T Consensus 515 ~~vcvldlr 523 (524)
T KOG0273|consen 515 GSVCVLDLR 523 (524)
T ss_pred CCceEEEec
Confidence 999999874
No 12
>KOG0284|consensus
Probab=100.00 E-value=5.4e-35 Score=288.38 Aligned_cols=290 Identities=21% Similarity=0.415 Sum_probs=247.9
Q ss_pred cccCCccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCC
Q psy4876 260 ILDAPEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNEN 337 (609)
Q Consensus 260 il~ap~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~ 337 (609)
...+..-.....|+.|.|.|+| +++++..|.+.+|+..+ -..+.+.. .|+..
T Consensus 87 f~h~s~NKvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~-------------------------fnFEtilQ-aHDs~ 140 (464)
T KOG0284|consen 87 FVHTSSNKVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS-------------------------FNFETILQ-AHDSP 140 (464)
T ss_pred eEeccccccccceeeEEEcCCCceeEeecccccEEEecCce-------------------------eeHHHHhh-hhccc
Confidence 3333334445679999999995 99999999999999865 23332222 29999
Q ss_pred eEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecC-CCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEE
Q psy4876 338 VCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDG-HDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALL 414 (609)
Q Consensus 338 V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~ 414 (609)
|.++.|+++|.++++|..+|.|++|+..- ..+..+.. |...|.+++| +...|++++.||+|+|||.... .....+
T Consensus 141 Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm-nnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~-kee~vL 218 (464)
T KOG0284|consen 141 VRTMKWSHNGTWMISGDKGGMIKYWQPNM-NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMP-KEERVL 218 (464)
T ss_pred ceeEEEccCCCEEEEcCCCceEEecccch-hhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCC-chhhee
Confidence 99999999999999999999999999865 44455555 4599999999 4689999999999999999876 456677
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEE
Q psy4876 415 QNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIY 494 (609)
Q Consensus 415 ~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~ 494 (609)
.+|.-.|.+++|+|...+||+|+.|+.|++||.+++ .++.++.+|...|.++.|.|++ ++|+++ +.|..++
T Consensus 219 ~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg------~cl~tlh~HKntVl~~~f~~n~-N~Llt~--skD~~~k 289 (464)
T KOG0284|consen 219 RGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG------SCLATLHGHKNTVLAVKFNPNG-NWLLTG--SKDQSCK 289 (464)
T ss_pred ccCCCCcceeccCCccceeEEccCCceeEeecCCCc------chhhhhhhccceEEEEEEcCCC-CeeEEc--cCCceEE
Confidence 999999999999999999999999999999999999 8999999999999999999999 677776 4999999
Q ss_pred EEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEE-eCCCCCEEEEEEeCCCCEEEEE
Q psy4876 495 FWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL-HGHSARVLNLAMSPDETTVLSA 572 (609)
Q Consensus 495 iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l-~~h~~~V~~l~~spdg~~L~s~ 572 (609)
++|+++.+.+..+..| ..+.++.|+|-..-|++. |+.||.|..|.+...+++..+ .+|...|++++|+|-|.+|++|
T Consensus 290 v~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lfts-gg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tg 368 (464)
T KOG0284|consen 290 VFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTS-GGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATG 368 (464)
T ss_pred EEehhHhHHHHHhhcchhhheeeccccccccceee-ccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeec
Confidence 9999988888888855 589999999999888877 458999999999866666655 5799999999999999999999
Q ss_pred ECCCCEEEEEcCCCc
Q psy4876 573 GADETLRLWKIFEKV 587 (609)
Q Consensus 573 s~Dg~I~iWdl~~~~ 587 (609)
+.|.++++|.-....
T Consensus 369 snd~t~rfw~r~rp~ 383 (464)
T KOG0284|consen 369 SNDRTVRFWTRNRPG 383 (464)
T ss_pred CCCcceeeeccCCCC
Confidence 999999999765443
No 13
>KOG0265|consensus
Probab=100.00 E-value=2.2e-32 Score=260.78 Aligned_cols=275 Identities=20% Similarity=0.348 Sum_probs=242.6
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
.-.|+.+.|+|+| ++++|.|..|.+|++.. .++....+. |.+.|..+.|.+
T Consensus 47 ~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~g--------------------------dceN~~~lkgHsgAVM~l~~~~ 100 (338)
T KOG0265|consen 47 KGEIYTIKFHPDGSCFASGGSDRAIVLWNVYG--------------------------DCENFWVLKGHSGAVMELHGMR 100 (338)
T ss_pred cceEEEEEECCCCCeEeecCCcceEEEEeccc--------------------------cccceeeeccccceeEeeeecc
Confidence 3458899999998 77799999999999764 455556666 999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeE
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVC 422 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 422 (609)
|++.|++++.|.+|+.||+++|+.++.+++|..-|.++.. +..++.+|+.||++++||+++.+ .++++. ..-+++
T Consensus 101 d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~-~~~t~~-~kyqlt 178 (338)
T KOG0265|consen 101 DGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE-AIKTFE-NKYQLT 178 (338)
T ss_pred CCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc-hhhccc-cceeEE
Confidence 9999999999999999999999999999999999999887 46789999999999999999863 555543 456799
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC--
Q psy4876 423 GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS-- 500 (609)
Q Consensus 423 ~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t-- 500 (609)
++.|..++..+.+|+-|+.|++||++.. ...+.+.+|...|+.+..+++|..++.- +.|.++++||++-
T Consensus 179 Av~f~d~s~qv~sggIdn~ikvWd~r~~------d~~~~lsGh~DtIt~lsls~~gs~llsn---sMd~tvrvwd~rp~~ 249 (338)
T KOG0265|consen 179 AVGFKDTSDQVISGGIDNDIKVWDLRKN------DGLYTLSGHADTITGLSLSRYGSFLLSN---SMDNTVRVWDVRPFA 249 (338)
T ss_pred EEEecccccceeeccccCceeeeccccC------cceEEeecccCceeeEEeccCCCccccc---cccceEEEEEecccC
Confidence 9999999999999999999999999988 7889999999999999999999877664 4899999999983
Q ss_pred --CceeEEEcCCC-----CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEE
Q psy4876 501 --GACLDSIDTKS-----QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAG 573 (609)
Q Consensus 501 --~~~~~~~~~~~-----~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s 573 (609)
..++..+..+. ....++|+|++..+-+ |+.|..+++||......+..+.||.+.|.+++|+|...+|.+++
T Consensus 250 p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~a--gs~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~ 327 (338)
T KOG0265|consen 250 PSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITA--GSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCS 327 (338)
T ss_pred CCCceEEEeecchhhhhhhcceeeccCCCCcccc--ccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEec
Confidence 34566665442 5678899999999988 66899999999999999999999999999999999999999999
Q ss_pred CCCCEEEEE
Q psy4876 574 ADETLRLWK 582 (609)
Q Consensus 574 ~Dg~I~iWd 582 (609)
.|.+|.+=.
T Consensus 328 sdk~i~lge 336 (338)
T KOG0265|consen 328 SDKTIYLGE 336 (338)
T ss_pred cCceeEeec
Confidence 999998744
No 14
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=2.9e-31 Score=265.65 Aligned_cols=274 Identities=30% Similarity=0.497 Sum_probs=238.0
Q ss_pred eeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
..|.+++|+|++ +++++.+|.|++|++.+ +.. ...+. |...+..+.|+++
T Consensus 10 ~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~-------------------------~~~--~~~~~~~~~~i~~~~~~~~ 62 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGSGDGTIKVWDLET-------------------------GEL--LRTLKGHTGPVRDVAASAD 62 (289)
T ss_pred CCEEEEEEcCCCCEEEEeecCcEEEEEEeeC-------------------------CCc--EEEEecCCcceeEEEECCC
Confidence 458999999984 55566799999999987 432 22333 7788999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGL 424 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 424 (609)
+++|++++.+|.|.+||+.+++.+..+..|...+.++.|+ +.++++++.+|.|.+||+++. .....+..|...|.++
T Consensus 63 ~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~ 141 (289)
T cd00200 63 GTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG-KCLTTLRGHTDWVNSV 141 (289)
T ss_pred CCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc-EEEEEeccCCCcEEEE
Confidence 9999999999999999999988888999999999999995 478888888999999999975 4677777899999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCcee
Q psy4876 425 KWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 425 ~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~ 504 (609)
+|+|++.++++++.|+.|++||++.+ +.+..+..|...|.+++|+|++..+++++ .|+.|++||+.+++.+
T Consensus 142 ~~~~~~~~l~~~~~~~~i~i~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~~~~i~i~d~~~~~~~ 212 (289)
T cd00200 142 AFSPDGTFVASSSQDGTIKLWDLRTG------KCVATLTGHTGEVNSVAFSPDGEKLLSSS---SDGTIKLWDLSTGKCL 212 (289)
T ss_pred EEcCcCCEEEEEcCCCcEEEEEcccc------ccceeEecCccccceEEECCCcCEEEEec---CCCcEEEEECCCCcee
Confidence 99999999999888999999999877 66777778888999999999986555543 5999999999999988
Q ss_pred EEEc-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEE
Q psy4876 505 DSID-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWK 582 (609)
Q Consensus 505 ~~~~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWd 582 (609)
..+. +...+.++.|++++.++++ +..++.|++|++.++..+..+..|...|.+++|++++.+|++++.|+.|++|+
T Consensus 213 ~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 213 GTLRGHENGVNSVAFSPDGYLLAS--GSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cchhhcCCceEEEEEcCCCcEEEE--EcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 8884 4558999999999777776 43699999999999999999999999999999999999999999999999996
No 15
>KOG0273|consensus
Probab=100.00 E-value=3.1e-32 Score=273.26 Aligned_cols=309 Identities=21% Similarity=0.405 Sum_probs=249.2
Q ss_pred ccCCCccccccCCccCCceeEEEEEecCC--CeEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceee
Q psy4876 252 YIPLTADRILDAPEIQNDYYLNLIDWSHF--NVLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDH 328 (609)
Q Consensus 252 ~i~~~p~~il~ap~~~~~~~v~~l~wsp~--~lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (609)
.||..-.+++. ....|.+.+|+|- +++| ++.|-..++|++...... ...+.++..|... .
T Consensus 166 ~I~~~~~kvl~-----~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~-------~~~q~~lrh~~~~-----~ 228 (524)
T KOG0273|consen 166 EIPSSKAKVLR-----HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNI-------GSTQLVLRHCIRE-----G 228 (524)
T ss_pred cccccceeecc-----CCCceEEEecCchhhhhhhccCCccceeeeeehhhccc-------cchhhhhhhhhhh-----h
Confidence 34444444443 2345888999994 4565 666789999998741000 0000001111111 0
Q ss_pred eeeecCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCC
Q psy4876 329 LMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRS 406 (609)
Q Consensus 329 l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~ 406 (609)
.........|++++|+.+|.+||+|+.||.++||+.. |.++.++..|.++|.++.|+ |++|++++.||++.+||..+
T Consensus 229 ~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~ 307 (524)
T KOG0273|consen 229 GKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHT 307 (524)
T ss_pred cccCCccCCcceEEecCCCCeEEEeecCcEEEEEecC-chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccC
Confidence 1122245789999999999999999999999999964 68889999999999999995 78999999999999999988
Q ss_pred CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEe
Q psy4876 407 RDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG 486 (609)
Q Consensus 407 ~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg 486 (609)
+ ...+.+.-|..+-..+.|-.+ ..|++++.|+.|+|+.+... .|+.++.+|.+.|.+|.|+|.+ .||+++
T Consensus 308 g-~~~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~------~P~~t~~GH~g~V~alk~n~tg-~LLaS~- 377 (524)
T KOG0273|consen 308 G-TVKQQFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGED------RPVKTFIGHHGEVNALKWNPTG-SLLASC- 377 (524)
T ss_pred c-eEEEeeeeccCCccceEEecC-ceEeecCCCceEEEEEecCC------CcceeeecccCceEEEEECCCC-ceEEEe-
Confidence 7 467777888888778889754 46999999999999999876 8999999999999999999988 577777
Q ss_pred ccCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCC---------eEEEEEecCCCeEEEEECCCCceEEEEeCCCCC
Q psy4876 487 GTADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYK---------ELVSAHGFAQNQLIIWKYPSLVKVAELHGHSAR 556 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~---------~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~ 556 (609)
+.|++++||++....+...+..|+ .|..+.|+|.|. .++++ ..|++|++||+..+.++..|..|+.+
T Consensus 378 -SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sa--s~dstV~lwdv~~gv~i~~f~kH~~p 454 (524)
T KOG0273|consen 378 -SDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASA--SFDSTVKLWDVESGVPIHTLMKHQEP 454 (524)
T ss_pred -cCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEe--ecCCeEEEEEccCCceeEeeccCCCc
Confidence 599999999999999998888776 899999999763 34554 37999999999999999999999999
Q ss_pred EEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchh
Q psy4876 557 VLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 557 V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
|.+++|+|+|++|++|+.||.|.+|++..++..+.
T Consensus 455 VysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s 489 (524)
T KOG0273|consen 455 VYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKS 489 (524)
T ss_pred eEEEEecCCCcEEEecCCCCeeEeccccchheeEe
Confidence 99999999999999999999999999988775543
No 16
>KOG0263|consensus
Probab=100.00 E-value=1.3e-32 Score=291.99 Aligned_cols=250 Identities=24% Similarity=0.458 Sum_probs=226.4
Q ss_pred eeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC-------------------------------eeEEEecC
Q psy4876 328 HLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK-------------------------------KKCRTMDG 375 (609)
Q Consensus 328 ~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~-------------------------------~~~~~l~~ 375 (609)
++.++. ....++|..|++|+.+||.|..|..|++|.+... ...+++.+
T Consensus 370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~G 449 (707)
T KOG0263|consen 370 CMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYG 449 (707)
T ss_pred EEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeec
Confidence 444554 5678999999999999999999999999988631 12345779
Q ss_pred CCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCC
Q psy4876 376 HDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHT 453 (609)
Q Consensus 376 h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~ 453 (609)
|.++|....|. .++|++++.|+++++|.+++. ..+..+.+|..+|+.+.|+|.|-|||+++.|++-++|.....
T Consensus 450 H~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~-s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~--- 525 (707)
T KOG0263|consen 450 HSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTW-SCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHN--- 525 (707)
T ss_pred CCCceeeeeecccccceeeccCCcceeeeecccc-eeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccC---
Confidence 99999999994 689999999999999999997 577788899999999999999999999999999999999876
Q ss_pred CCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecC
Q psy4876 454 FSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFA 532 (609)
Q Consensus 454 ~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~ 532 (609)
.+++.+.+|.+.|.|+.|+|+. .++++| +.|.++++||+.+|..++.|.+| ++|.+++|+|+|++|++ |..
T Consensus 526 ---~PlRifaghlsDV~cv~FHPNs-~Y~aTG--SsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaS--g~e 597 (707)
T KOG0263|consen 526 ---KPLRIFAGHLSDVDCVSFHPNS-NYVATG--SSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLAS--GDE 597 (707)
T ss_pred ---CchhhhcccccccceEEECCcc-cccccC--CCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEee--ccc
Confidence 8999999999999999999987 677776 59999999999999999999876 59999999999999999 669
Q ss_pred CCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccc
Q psy4876 533 QNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 533 dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
||.|.|||+.++..+..+.+|++.|.++.|+.||..||+||.|++|++||+......
T Consensus 598 d~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~ 654 (707)
T KOG0263|consen 598 DGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIEL 654 (707)
T ss_pred CCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhccc
Confidence 999999999999999999999999999999999999999999999999999875544
No 17
>KOG0291|consensus
Probab=100.00 E-value=2e-31 Score=280.16 Aligned_cols=290 Identities=22% Similarity=0.417 Sum_probs=246.8
Q ss_pred ceeEEEEEecCCC-eEEEEcC--CeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEc
Q psy4876 269 DYYLNLIDWSHFN-VLAVALG--GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWI 344 (609)
Q Consensus 269 ~~~v~~l~wsp~~-lla~s~d--g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~s 344 (609)
+..|..++|+..| .+|.+.. |.+-||++.+ .. .+.... |-..+++++++
T Consensus 307 ~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs-------------------------Es--YVlKQQgH~~~i~~l~YS 359 (893)
T KOG0291|consen 307 DQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS-------------------------ES--YVLKQQGHSDRITSLAYS 359 (893)
T ss_pred cceeeEEEecccCCEEEEcCCccceEEEEEeec-------------------------cc--eeeeccccccceeeEEEC
Confidence 4457788888765 7886665 5999999987 33 233333 88999999999
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccC-CCCe
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNH-TQEV 421 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h-~~~V 421 (609)
|||+++|+|+.||.|+|||..++-+..++..|...|+.+.| .++.+++.+-||+|+.||+... ...+++... ....
T Consensus 360 pDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRY-rNfRTft~P~p~Qf 438 (893)
T KOG0291|consen 360 PDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRY-RNFRTFTSPEPIQF 438 (893)
T ss_pred CCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccc-ceeeeecCCCceee
Confidence 99999999999999999999999999999999999999999 6999999999999999999875 355555533 3457
Q ss_pred EEEEEccCCCEEEEEeCCC-cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC
Q psy4876 422 CGLKWSPDGRYLASGGNDN-LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 422 ~~l~~spdg~~lasgs~Dg-~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t 500 (609)
.|++..|.|.+++.|+.|. .|++|++.+| +.+..+.+|.++|.+++|+|.+. +|++| +.|++|++||+-.
T Consensus 439 scvavD~sGelV~AG~~d~F~IfvWS~qTG------qllDiLsGHEgPVs~l~f~~~~~-~LaS~--SWDkTVRiW~if~ 509 (893)
T KOG0291|consen 439 SCVAVDPSGELVCAGAQDSFEIFVWSVQTG------QLLDILSGHEGPVSGLSFSPDGS-LLASG--SWDKTVRIWDIFS 509 (893)
T ss_pred eEEEEcCCCCEEEeeccceEEEEEEEeecC------eeeehhcCCCCcceeeEEccccC-eEEec--cccceEEEEEeec
Confidence 7899999999999999886 5999999999 89999999999999999999985 88886 6999999999864
Q ss_pred -CceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC--------------------CCCCEEE
Q psy4876 501 -GACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG--------------------HSARVLN 559 (609)
Q Consensus 501 -~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~--------------------h~~~V~~ 559 (609)
...+.++...+.+..+.|.|+|+.+++++ -||+|.+||...+..+..+.+ ....++.
T Consensus 510 s~~~vEtl~i~sdvl~vsfrPdG~elaVaT--ldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftt 587 (893)
T KOG0291|consen 510 SSGTVETLEIRSDVLAVSFRPDGKELAVAT--LDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTT 587 (893)
T ss_pred cCceeeeEeeccceeEEEEcCCCCeEEEEE--ecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEE
Confidence 35677888889999999999999999976 799999999987666544332 1246899
Q ss_pred EEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhhhcc
Q psy4876 560 LAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEIKNN 597 (609)
Q Consensus 560 l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~~~~ 597 (609)
+++++||..|++||..+.|+||++.++...++-++..+
T Consensus 588 i~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfqiS~N 625 (893)
T KOG0291|consen 588 ICYSADGKCILAGGESNSICIYDVPEGVLLKKFQISDN 625 (893)
T ss_pred EEEcCCCCEEEecCCcccEEEEECchhheeeeEEeccc
Confidence 99999999999999999999999999988887766544
No 18
>KOG0266|consensus
Probab=100.00 E-value=3.2e-31 Score=287.15 Aligned_cols=281 Identities=27% Similarity=0.450 Sum_probs=242.6
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
...|.++.|++++ +++++.++.+++|+... .....+.++. |...|.+++|+|
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~-------------------------~~~~~~~~l~~h~~~v~~~~fs~ 213 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSDGLIRIWKLEG-------------------------IKSNLLRELSGHTRGVSDVAFSP 213 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCCCcEEEeeccc-------------------------ccchhhccccccccceeeeEECC
Confidence 3457889999997 66677899999999966 3312333444 999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeC-CCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeE
Q psy4876 346 EGYMLGVGTSLGTVQLWDV-SAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVC 422 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~-~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 422 (609)
+|.++++|+.|++|+|||+ ..+..++++.+|...|++++|+ ++++++|+.|++|++||++++ .....+.+|.+.|.
T Consensus 214 d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~-~~~~~l~~hs~~is 292 (456)
T KOG0266|consen 214 DGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG-ECVRKLKGHSDGIS 292 (456)
T ss_pred CCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC-eEEEeeeccCCceE
Confidence 9999999999999999999 5568999999999999999994 689999999999999999996 68999999999999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCccc--EEEEEEcCCCCcEEEEEeccCCCeEEEEECCC
Q psy4876 423 GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA--VKAIAWCPWSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 423 ~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~--V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t 500 (609)
+++|+++|.+|++++.|+.|+|||+.++... ++..+..+... +++++|+|++.++++.. .|+.+++||+..
T Consensus 293 ~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~---~d~~~~~w~l~~ 365 (456)
T KOG0266|consen 293 GLAFSPDGNLLVSASYDGTIRVWDLETGSKL----CLKLLSGAENSAPVTSVQFSPNGKYLLSAS---LDRTLKLWDLRS 365 (456)
T ss_pred EEEECCCCCEEEEcCCCccEEEEECCCCcee----eeecccCCCCCCceeEEEECCCCcEEEEec---CCCeEEEEEccC
Confidence 9999999999999999999999999998210 45666666555 99999999997666653 799999999999
Q ss_pred CceeEEEcCCC----CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC-CCCEEEEEEeCCCCEEEEEE--
Q psy4876 501 GACLDSIDTKS----QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH-SARVLNLAMSPDETTVLSAG-- 573 (609)
Q Consensus 501 ~~~~~~~~~~~----~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h-~~~V~~l~~spdg~~L~s~s-- 573 (609)
+.++..+..+. .+.+...++.+.++++ |+.|+.|++|+..++..+..+.+| ...|..+.++|...++++++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s--g~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~ 443 (456)
T KOG0266|consen 366 GKSVGTYTGHSNLVRCIFSPTLSTGGKLIYS--GSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFE 443 (456)
T ss_pred CcceeeecccCCcceeEecccccCCCCeEEE--EeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcC
Confidence 99988887653 2344455788899988 669999999999999999999999 89999999999999999998
Q ss_pred CCCCEEEEEcC
Q psy4876 574 ADETLRLWKIF 584 (609)
Q Consensus 574 ~Dg~I~iWdl~ 584 (609)
.|+.|++|...
T Consensus 444 ~d~~~~~w~~~ 454 (456)
T KOG0266|consen 444 GDGLIRLWKYD 454 (456)
T ss_pred CCceEEEecCC
Confidence 79999999864
No 19
>KOG0296|consensus
Probab=100.00 E-value=4.8e-31 Score=257.53 Aligned_cols=275 Identities=20% Similarity=0.358 Sum_probs=234.2
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
.|.+++.+|++ ++++|.|..-+||++.+ +. .+.++. |.+.|+++.|+.+|
T Consensus 66 svFavsl~P~~~l~aTGGgDD~AflW~~~~-------------------------ge--~~~eltgHKDSVt~~~Fshdg 118 (399)
T KOG0296|consen 66 SVFAVSLHPNNNLVATGGGDDLAFLWDIST-------------------------GE--FAGELTGHKDSVTCCSFSHDG 118 (399)
T ss_pred ceEEEEeCCCCceEEecCCCceEEEEEccC-------------------------Cc--ceeEecCCCCceEEEEEccCc
Confidence 47789999975 44588899999999988 55 555666 99999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
.+||+|..+|.|+||+..++.....+...-..+.-+.|+ +++|++|+.||.+.+|.+... ...+.+.+|..++++-.
T Consensus 119 tlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~-~~~kv~~Gh~~~ct~G~ 197 (399)
T KOG0296|consen 119 TLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ-ALCKVMSGHNSPCTCGE 197 (399)
T ss_pred eEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCc-ceeeEecCCCCCccccc
Confidence 999999999999999999999888887666777778886 589999999999999999986 57889999999999999
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec------------------------------------------
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS------------------------------------------ 463 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~------------------------------------------ 463 (609)
|.|+|+.++++..||+|++||+.+++ +++.+.
T Consensus 198 f~pdGKr~~tgy~dgti~~Wn~ktg~------p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~ 271 (399)
T KOG0296|consen 198 FIPDGKRILTGYDDGTIIVWNPKTGQ------PLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCN 271 (399)
T ss_pred ccCCCceEEEEecCceEEEEecCCCc------eeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEec
Confidence 99999999999999999999999883 333332
Q ss_pred ---------CCcccEEEEEEcCCCCc--EEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecC
Q psy4876 464 ---------RHQAAVKAIAWCPWSPN--VLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFA 532 (609)
Q Consensus 464 ---------~h~~~V~~l~~sp~~~~--llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~ 532 (609)
.+...+.++.+.|.... |.|+ |+.||+|.|||+...+..+.+.+...|..+.|-+ ..+|++++ .
T Consensus 272 n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~--G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c--~ 346 (399)
T KOG0296|consen 272 NGTVPELKPSQEELDESVESIPSSSKLPLAAC--GSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTAC--A 346 (399)
T ss_pred CCCCccccccchhhhhhhhhcccccccchhhc--ccccceEEEEecccchhheeccCCCceEEEEEcC-cchheeec--c
Confidence 11222233333333322 3344 4699999999999999999999999999999999 78888855 7
Q ss_pred CCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 533 QNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 533 dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
+|.|++||.++|..+.++.||...|.+++++|++++|+|+|.|++.+||++.
T Consensus 347 ~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 347 NGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred CceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 9999999999999999999999999999999999999999999999999875
No 20
>KOG0645|consensus
Probab=100.00 E-value=1.7e-30 Score=244.73 Aligned_cols=277 Identities=21% Similarity=0.350 Sum_probs=226.9
Q ss_pred eEEEEEecCC-C--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec--CCCCeEEEEEcc
Q psy4876 271 YLNLIDWSHF-N--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE--GNENVCSVAWIQ 345 (609)
Q Consensus 271 ~v~~l~wsp~-~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--h~~~V~~v~~sp 345 (609)
.+..++|+|. | +.+++.|+.|+||+...+ ....+...+. |...|.+++|+|
T Consensus 16 r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~------------------------~s~~ck~vld~~hkrsVRsvAwsp 71 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILASCGTDKAVRIWSTSSG------------------------DSWTCKTVLDDGHKRSVRSVAWSP 71 (312)
T ss_pred cEEEEEeccCCceEEEeecCCceEEEEecCCC------------------------CcEEEEEeccccchheeeeeeecC
Confidence 4778999998 4 445888999999998741 3344444444 999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC--eeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCC--eeEEEEccCCC
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAK--KKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRD--HKVALLQNHTQ 419 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~--~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~--~~~~~~~~h~~ 419 (609)
.|++||+|+.|.++.||.-..+ +++.++.||...|.+++| +|++|+++++|..|-||.+...+ .....++.|++
T Consensus 72 ~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Htq 151 (312)
T KOG0645|consen 72 HGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQ 151 (312)
T ss_pred CCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccc
Confidence 9999999999999999987654 788999999999999999 68999999999999999998543 46788999999
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC
Q psy4876 420 EVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS 499 (609)
Q Consensus 420 ~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~ 499 (609)
.|..+.|+|...+|++++.|++|++|+-..+ ....++.++.+|...|.+++|++.|. -++++ +.|++++||-..
T Consensus 152 DVK~V~WHPt~dlL~S~SYDnTIk~~~~~~d---ddW~c~~tl~g~~~TVW~~~F~~~G~-rl~s~--sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 152 DVKHVIWHPTEDLLFSCSYDNTIKVYRDEDD---DDWECVQTLDGHENTVWSLAFDNIGS-RLVSC--SDDGTVSIWRLY 225 (312)
T ss_pred cccEEEEcCCcceeEEeccCCeEEEEeecCC---CCeeEEEEecCccceEEEEEecCCCc-eEEEe--cCCcceEeeeec
Confidence 9999999999999999999999999987743 23478999999999999999999995 45555 589999999865
Q ss_pred CCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC------ceEE-EEeCCCCCEEEEEEeCC-CCEEEE
Q psy4876 500 SGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL------VKVA-ELHGHSARVLNLAMSPD-ETTVLS 571 (609)
Q Consensus 500 t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~------~~~~-~l~~h~~~V~~l~~spd-g~~L~s 571 (609)
+. -...+...+..+.|. ...|++ +..|+.|++|.-... +.+. .-..|...|++++|.|. ...|++
T Consensus 226 ~~---~~~~~sr~~Y~v~W~--~~~IaS--~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s 298 (312)
T KOG0645|consen 226 TD---LSGMHSRALYDVPWD--NGVIAS--GGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLAS 298 (312)
T ss_pred cC---cchhcccceEeeeec--ccceEe--ccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceee
Confidence 22 112234578889998 455666 447999999976532 2222 22468889999999995 679999
Q ss_pred EECCCCEEEEEcC
Q psy4876 572 AGADETLRLWKIF 584 (609)
Q Consensus 572 ~s~Dg~I~iWdl~ 584 (609)
|+.||.|++|.+.
T Consensus 299 ~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 299 GGDDGIVNFWELE 311 (312)
T ss_pred cCCCceEEEEEec
Confidence 9999999999875
No 21
>KOG0315|consensus
Probab=100.00 E-value=8.3e-31 Score=243.91 Aligned_cols=264 Identities=21% Similarity=0.322 Sum_probs=230.2
Q ss_pred ceeEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 269 DYYLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 269 ~~~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
|..||.|...|++ .||++....|++||+.+ ++..++.+++ |...|++|.|..+
T Consensus 40 dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S-------------------------~np~Pv~t~e~h~kNVtaVgF~~d 94 (311)
T KOG0315|consen 40 DSQVNRLEITPDKKDLAAAGNQHVRLYDLNS-------------------------NNPNPVATFEGHTKNVTAVGFQCD 94 (311)
T ss_pred ccceeeEEEcCCcchhhhccCCeeEEEEccC-------------------------CCCCceeEEeccCCceEEEEEeec
Confidence 6679999999996 88999999999999999 7777888888 9999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGL 424 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 424 (609)
|+.+++|+.||+++|||++...+.+.++ |..+|.++..+ ...|++|..+|.|++||+.........+......|.++
T Consensus 95 grWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl 173 (311)
T KOG0315|consen 95 GRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSL 173 (311)
T ss_pred CeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeE
Confidence 9999999999999999999977777776 77999999995 57899999999999999998643334445556789999
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC-ce
Q psy4876 425 KWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG-AC 503 (609)
Q Consensus 425 ~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~-~~ 503 (609)
...|||.+++.+.+.|..++|++-..+.....+++.++..|.+.+..+.++|++++ |+++ +.|.+++||++++. +.
T Consensus 174 ~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~-lat~--ssdktv~iwn~~~~~kl 250 (311)
T KOG0315|consen 174 TVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKY-LATC--SSDKTVKIWNTDDFFKL 250 (311)
T ss_pred EEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcE-EEee--cCCceEEEEecCCceee
Confidence 99999999999999999999999887666667899999999999999999999864 5555 37999999999987 44
Q ss_pred eEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEe
Q psy4876 504 LDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMS 563 (609)
Q Consensus 504 ~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~s 563 (609)
...++.+ ..+..++||.+|.||++ |+.|+.+++|++..++.+....+|.....|++..
T Consensus 251 e~~l~gh~rWvWdc~FS~dg~YlvT--assd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 251 ELVLTGHQRWVWDCAFSADGEYLVT--ASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred EEEeecCCceEEeeeeccCccEEEe--cCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 4455544 47999999999999999 4589999999999999999999998888888764
No 22
>KOG0285|consensus
Probab=100.00 E-value=6e-31 Score=255.71 Aligned_cols=292 Identities=22% Similarity=0.337 Sum_probs=250.0
Q ss_pred CccccCCCccccccCCccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccce
Q psy4876 249 TSRYIPLTADRILDAPEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAI 326 (609)
Q Consensus 249 ~~r~i~~~p~~il~ap~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (609)
+..+.|-.-.+++..+ .-+|.|+++.|.+ +++++.|++|.|||+++ +.+
T Consensus 135 PeWHapwKl~rVi~gH----lgWVr~vavdP~n~wf~tgs~DrtikIwDlat-------------------------g~L 185 (460)
T KOG0285|consen 135 PEWHAPWKLYRVISGH----LGWVRSVAVDPGNEWFATGSADRTIKIWDLAT-------------------------GQL 185 (460)
T ss_pred ccccCcceehhhhhhc----cceEEEEeeCCCceeEEecCCCceeEEEEccc-------------------------CeE
Confidence 3344444445555543 3479999999986 66688999999999999 654
Q ss_pred eeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEE
Q psy4876 327 DHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHD 403 (609)
Q Consensus 327 ~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd 403 (609)
. .++. |...|..|++|+...||++++.|+.|+.||++..+.++.+.+|-..|.|++.+ -+.|++|++|.++++||
T Consensus 186 k--ltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWD 263 (460)
T KOG0285|consen 186 K--LTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWD 263 (460)
T ss_pred E--EeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEee
Confidence 3 4555 88999999999999999999999999999999999999999999999999997 47999999999999999
Q ss_pred cCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEE
Q psy4876 404 VRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLA 483 (609)
Q Consensus 404 ~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~lla 483 (609)
+++. ..+..+.+|...|..+.+.|-...+++|+.|++|++||++.+ +....+..|...|.+++.+|.. ++++
T Consensus 264 iRtr-~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~ag------kt~~tlt~hkksvral~lhP~e-~~fA 335 (460)
T KOG0285|consen 264 IRTR-ASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAG------KTMITLTHHKKSVRALCLHPKE-NLFA 335 (460)
T ss_pred eccc-ceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccC------ceeEeeecccceeeEEecCCch-hhhh
Confidence 9997 589999999999999999997778999999999999999999 7788899999999999999975 6788
Q ss_pred EEeccCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe-----C---CC
Q psy4876 484 SGGGTADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH-----G---HS 554 (609)
Q Consensus 484 sggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~-----~---h~ 554 (609)
+++ -..|+-|++..|..+..+..+. .+.+++.+.|+-++ + |.++|.|.+||.+++.....+. | .+
T Consensus 336 Sas---~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~-~--G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sE 409 (460)
T KOG0285|consen 336 SAS---PDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLV-S--GGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESE 409 (460)
T ss_pred ccC---CccceeccCCccchhhccccccceeeeeeeccCceEE-E--cCCceEEEEEecCcCcccccccccccCCccccc
Confidence 763 6789999999999988887665 67888888776444 4 6689999999999886655442 1 34
Q ss_pred CCEEEEEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 555 ARVLNLAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 555 ~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
..|.+.+|...|..|++|..|.+|++|.-.+
T Consensus 410 agI~as~fDktg~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 410 AGIFASCFDKTGSRLITGEADKTIKMYKEDE 440 (460)
T ss_pred cceeEEeecccCceEEeccCCcceEEEeccc
Confidence 6799999999999999999999999998654
No 23
>KOG0291|consensus
Probab=100.00 E-value=6.2e-30 Score=268.94 Aligned_cols=241 Identities=21% Similarity=0.390 Sum_probs=219.9
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecC-CeEEEEEcCCCCeeE
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRC-GNIVHHDVRSRDHKV 411 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~d-g~I~iwd~~~~~~~~ 411 (609)
...|++.+|++..+.||+|-..|.+.+|++....+++.+.-...+|..++|| |+.|+.|+.. |.+.||+.... ..+
T Consensus 265 ~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsE-sYV 343 (893)
T KOG0291|consen 265 SSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSE-SYV 343 (893)
T ss_pred ccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeecc-cee
Confidence 3789999999999999999999999999999999999999888999999997 9999998764 89999999985 577
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
...++|...+.+++++|||+++|+|+.||.|+|||...+ -++.++..|...|+++.|+..|..++.+ +.||
T Consensus 344 lKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sg------fC~vTFteHts~Vt~v~f~~~g~~llss---SLDG 414 (893)
T KOG0291|consen 344 LKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSG------FCFVTFTEHTSGVTAVQFTARGNVLLSS---SLDG 414 (893)
T ss_pred eeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCc------eEEEEeccCCCceEEEEEEecCCEEEEe---ecCC
Confidence 788899999999999999999999999999999999988 8999999999999999999998655554 4899
Q ss_pred eEEEEECCCCceeEEEcCCC--CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEE
Q psy4876 492 HIYFWNVSSGACLDSIDTKS--QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTV 569 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~~~--~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L 569 (609)
+|+.||+....+.+++.... +..+++..|.|..++++ +.+.=.|+||++.+|+.+..+.||+++|.+++|+|+|..|
T Consensus 415 tVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG-~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~L 493 (893)
T KOG0291|consen 415 TVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAG-AQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLL 493 (893)
T ss_pred eEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEee-ccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeE
Confidence 99999999999999998765 67788888889888774 3344569999999999999999999999999999999999
Q ss_pred EEEECCCCEEEEEcCCC
Q psy4876 570 LSAGADETLRLWKIFEK 586 (609)
Q Consensus 570 ~s~s~Dg~I~iWdl~~~ 586 (609)
++++.|.+||+||++..
T Consensus 494 aS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 494 ASGSWDKTVRIWDIFSS 510 (893)
T ss_pred EeccccceEEEEEeecc
Confidence 99999999999999986
No 24
>KOG0263|consensus
Probab=100.00 E-value=5.5e-31 Score=279.74 Aligned_cols=289 Identities=17% Similarity=0.311 Sum_probs=228.3
Q ss_pred EEEEEecCCC-eEE-EEcCCeEEEEeCCCCCCCceE---EecCCcccc--ccccccccccceeeeeeecCCCCeEEEEEc
Q psy4876 272 LNLIDWSHFN-VLA-VALGGSIYLWNGESDSNSKYI---ICQSPLVQE--LTSKCIQDNRAIDHLMDLEGNENVCSVAWI 344 (609)
Q Consensus 272 v~~l~wsp~~-lla-~s~dg~I~iWd~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~l~~~~h~~~V~~v~~s 344 (609)
++|.+|++|. ++| +-.|..|++|.+...+..... -.-.++... +......+........-..|.++|..+.|+
T Consensus 381 v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFs 460 (707)
T KOG0263|consen 381 VTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFS 460 (707)
T ss_pred ceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeec
Confidence 8899999986 555 556889999999842100000 000010000 000111111222222223399999999999
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeE
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVC 422 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 422 (609)
|+.++|++++.|++|++|.+.+..++..+.+|..+|+.+.|. |.+|++++.|++-++|..... .+.+.+.+|-..|.
T Consensus 461 Pd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~-~PlRifaghlsDV~ 539 (707)
T KOG0263|consen 461 PDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHN-KPLRIFAGHLSDVD 539 (707)
T ss_pred ccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccC-Cchhhhcccccccc
Confidence 999999999999999999999999999999999999999994 799999999999999999885 58899999999999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc
Q psy4876 423 GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA 502 (609)
Q Consensus 423 ~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~ 502 (609)
|+.|+|+..|+|+||.|.+|++||+.+| ..++.|.+|.++|.+|+|+|+| ..|++| +.|+.|.+||+.++.
T Consensus 540 cv~FHPNs~Y~aTGSsD~tVRlWDv~~G------~~VRiF~GH~~~V~al~~Sp~G-r~LaSg--~ed~~I~iWDl~~~~ 610 (707)
T KOG0263|consen 540 CVSFHPNSNYVATGSSDRTVRLWDVSTG------NSVRIFTGHKGPVTALAFSPCG-RYLASG--DEDGLIKIWDLANGS 610 (707)
T ss_pred eEEECCcccccccCCCCceEEEEEcCCC------cEEEEecCCCCceEEEEEcCCC-ceEeec--ccCCcEEEEEcCCCc
Confidence 9999999999999999999999999999 7899999999999999999988 567776 499999999999999
Q ss_pred eeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc------------------------eEEEEeCCCCCE
Q psy4876 503 CLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV------------------------KVAELHGHSARV 557 (609)
Q Consensus 503 ~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~------------------------~~~~l~~h~~~V 557 (609)
.+..+..| +.|.++.|+.+|..|++ |+.|++|++||+..-. .+..+.....+|
T Consensus 611 ~v~~l~~Ht~ti~SlsFS~dg~vLas--gg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv 688 (707)
T KOG0263|consen 611 LVKQLKGHTGTIYSLSFSRDGNVLAS--GGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPV 688 (707)
T ss_pred chhhhhcccCceeEEEEecCCCEEEe--cCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCceE
Confidence 99888765 58999999999999999 5589999999974321 333444445677
Q ss_pred EEEEEeCCCCEEEEE
Q psy4876 558 LNLAMSPDETTVLSA 572 (609)
Q Consensus 558 ~~l~~spdg~~L~s~ 572 (609)
.++.|....-.|+.|
T Consensus 689 ~~l~FtrrNl~L~~g 703 (707)
T KOG0263|consen 689 VGLHFTRRNLLLAVG 703 (707)
T ss_pred EEEEEeccceeEEec
Confidence 777777655444443
No 25
>KOG0295|consensus
Probab=99.98 E-value=1.7e-31 Score=260.53 Aligned_cols=250 Identities=21% Similarity=0.311 Sum_probs=230.3
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
|...|+.+-|+|+-..+++++.|++|++||..++++.+.+++|...|..|+|+ |.+|++++.|-.+.+||..+...++
T Consensus 107 ~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ 186 (406)
T KOG0295|consen 107 HRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCI 186 (406)
T ss_pred cccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999995 7999999999999999999866678
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
..+.+|...|.+++|-|.|.++++++.|.+|+.|++.++ .++.++.+|...|..++.+.|| .+++++ +.|.
T Consensus 187 ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg------~cv~t~~~h~ewvr~v~v~~DG-ti~As~--s~dq 257 (406)
T KOG0295|consen 187 KSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTG------YCVKTFPGHSEWVRMVRVNQDG-TIIASC--SNDQ 257 (406)
T ss_pred HHhcCcccceeeEEEEecCCeeeecccccceeEEecccc------eeEEeccCchHhEEEEEecCCe-eEEEec--CCCc
Confidence 888999999999999999999999999999999999999 8999999999999999999988 688887 4999
Q ss_pred eEEEEECCCCceeEEEcCCC-CeEEEEEcCC---------------CCeEEEEEecCCCeEEEEECCCCceEEEEeCCCC
Q psy4876 492 HIYFWNVSSGACLDSIDTKS-QVCALLWNSD---------------YKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSA 555 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~---------------g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~ 555 (609)
+|++|-+.+++|...+..+. .|.+++|-|. +.++.+ ++.|++|++||+.++.++.++.+|..
T Consensus 258 tl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s--~SrDktIk~wdv~tg~cL~tL~ghdn 335 (406)
T KOG0295|consen 258 TLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGS--GSRDKTIKIWDVSTGMCLFTLVGHDN 335 (406)
T ss_pred eEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEe--ecccceEEEEeccCCeEEEEEecccc
Confidence 99999999999888887664 8888888763 235555 66999999999999999999999999
Q ss_pred CEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 556 RVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 556 ~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
.|..++|+|.|+||+++..|++|++||+.+....+....
T Consensus 336 wVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~a 374 (406)
T KOG0295|consen 336 WVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEA 374 (406)
T ss_pred eeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCC
Confidence 999999999999999999999999999999998876654
No 26
>KOG0318|consensus
Probab=99.98 E-value=2.6e-29 Score=255.20 Aligned_cols=309 Identities=18% Similarity=0.303 Sum_probs=242.2
Q ss_pred CccccCCCccccccCCccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccce
Q psy4876 249 TSRYIPLTADRILDAPEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAI 326 (609)
Q Consensus 249 ~~r~i~~~p~~il~ap~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (609)
...+..-+|.+.-.....+.. +|+++.|+||| +++++.||.|+|||-.+ ++.
T Consensus 171 ~v~ffeGPPFKFk~s~r~Hsk-FV~~VRysPDG~~Fat~gsDgki~iyDGkt-------------------------ge~ 224 (603)
T KOG0318|consen 171 TVAFFEGPPFKFKSSFREHSK-FVNCVRYSPDGSRFATAGSDGKIYIYDGKT-------------------------GEK 224 (603)
T ss_pred eEEEeeCCCeeeeeccccccc-ceeeEEECCCCCeEEEecCCccEEEEcCCC-------------------------ccE
Confidence 344455555555544443333 59999999997 77799999999999888 443
Q ss_pred eeeee-ec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCC---CceEEEEecCCEEEEEecCCeEEE
Q psy4876 327 DHLMD-LE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHD---VRVGALAWNTYILSSGSRCGNIVH 401 (609)
Q Consensus 327 ~~l~~-~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~---~~V~~l~~~~~~L~sgs~dg~I~i 401 (609)
....+ -. |.+.|.+++|+||+..+++++.|.+++|||+.+.++++++.... .....+-|....|++.+.+|+|.+
T Consensus 225 vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ 304 (603)
T KOG0318|consen 225 VGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINY 304 (603)
T ss_pred EEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEE
Confidence 22222 22 99999999999999999999999999999999999999886433 233445577888999999999999
Q ss_pred EEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCC---------------------------
Q psy4876 402 HDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTF--------------------------- 454 (609)
Q Consensus 402 wd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~--------------------------- 454 (609)
++..... ....+.+|...|+++..++|+.+|++|+.||.|.-||..++....
T Consensus 305 ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~D 383 (603)
T KOG0318|consen 305 LNPSDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWD 383 (603)
T ss_pred ecccCCC-hhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecC
Confidence 9999886 889999999999999999999999999999999999987653210
Q ss_pred ---------------------Cccc-------------------eEeecCCc--------ccEEEEEEcCCCCcEEEEEe
Q psy4876 455 ---------------------STQP-------------------IHSLSRHQ--------AAVKAIAWCPWSPNVLASGG 486 (609)
Q Consensus 455 ---------------------~~~~-------------------~~~~~~h~--------~~V~~l~~sp~~~~llasgg 486 (609)
..+| +..++.+. -...+++++|++ ..++.||
T Consensus 384 d~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~-~~vaVGG 462 (603)
T KOG0318|consen 384 DTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDG-SEVAVGG 462 (603)
T ss_pred CeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCC-CEEEEec
Confidence 0000 00011111 123567778877 4666665
Q ss_pred ccCCCeEEEEECCCCcee---EEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEE-EeCCCCCEEEEEE
Q psy4876 487 GTADRHIYFWNVSSGACL---DSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAE-LHGHSARVLNLAM 562 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t~~~~---~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~-l~~h~~~V~~l~~ 562 (609)
.|++|++|.+..+... ..+++...++.++|+||+.+|++ +...+.+.+||..+.+.... +.-|+.+|.+++|
T Consensus 463 --~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~--~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aW 538 (603)
T KOG0318|consen 463 --QDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAA--GDASRKVVLYDVASREVKTNRWAFHTAKINCVAW 538 (603)
T ss_pred --ccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEE--eccCCcEEEEEcccCceecceeeeeeeeEEEEEe
Confidence 8999999999875533 44567789999999999999999 66899999999988776443 3459999999999
Q ss_pred eCCCCEEEEEECCCCEEEEEcCCCccc
Q psy4876 563 SPDETTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 563 spdg~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
+|+..+||||+.|-.|.||++..+...
T Consensus 539 sP~n~~vATGSlDt~Viiysv~kP~~~ 565 (603)
T KOG0318|consen 539 SPNNKLVATGSLDTNVIIYSVKKPAKH 565 (603)
T ss_pred CCCceEEEeccccceEEEEEccChhhh
Confidence 999999999999999999999876654
No 27
>KOG0279|consensus
Probab=99.98 E-value=6.4e-30 Score=241.82 Aligned_cols=255 Identities=18% Similarity=0.271 Sum_probs=219.8
Q ss_pred eeeeeeec-CCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCC-----CeeEEEecCCCCceEEEEe--cCCEEEEEecC
Q psy4876 326 IDHLMDLE-GNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSA-----KKKCRTMDGHDVRVGALAW--NTYILSSGSRC 396 (609)
Q Consensus 326 ~~~l~~~~-h~~~V~~v~~spdg-~~Lasgs~dg~I~iwd~~~-----~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~d 396 (609)
.....+++ |.+.|+.++..+.+ ..|++++.|..+.+|++.. |..++.+.||...|..+.. ++++.++++.|
T Consensus 5 l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD 84 (315)
T KOG0279|consen 5 LVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWD 84 (315)
T ss_pred heeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecccc
Confidence 34445666 99999999999875 7889999999999998854 5678999999999999887 78999999999
Q ss_pred CeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCC--cccEEEEEE
Q psy4876 397 GNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRH--QAAVKAIAW 474 (609)
Q Consensus 397 g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h--~~~V~~l~~ 474 (609)
+++++||+.++ +..+.+.+|...|.+++|++|.+.+++|+.|++|.+|+.... +..++..+ ...|.|+.|
T Consensus 85 ~~lrlWDl~~g-~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-------ck~t~~~~~~~~WVscvrf 156 (315)
T KOG0279|consen 85 GTLRLWDLATG-ESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-------CKYTIHEDSHREWVSCVRF 156 (315)
T ss_pred ceEEEEEecCC-cEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc-------EEEEEecCCCcCcEEEEEE
Confidence 99999999998 588899999999999999999999999999999999998864 55555444 789999999
Q ss_pred cCCC-CcEEEEEeccCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC
Q psy4876 475 CPWS-PNVLASGGGTADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG 552 (609)
Q Consensus 475 sp~~-~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~ 552 (609)
+|.. .-+++++ +.|++|++||+++.+....+.++. .++.+.++|||...++ |..||.+.+||+..++.+..+ +
T Consensus 157 sP~~~~p~Ivs~--s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcas--Ggkdg~~~LwdL~~~k~lysl-~ 231 (315)
T KOG0279|consen 157 SPNESNPIIVSA--SWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCAS--GGKDGEAMLWDLNEGKNLYSL-E 231 (315)
T ss_pred cCCCCCcEEEEc--cCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEec--CCCCceEEEEEccCCceeEec-c
Confidence 9985 4466665 499999999999999888887664 8999999999999988 779999999999999998776 5
Q ss_pred CCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 553 HSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 553 h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
|...|.+++|+|+..+|+.+. +..|+|||+..+........
T Consensus 232 a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~ 272 (315)
T KOG0279|consen 232 AFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKL 272 (315)
T ss_pred CCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhccc
Confidence 889999999999987777664 55699999998776544433
No 28
>KOG0281|consensus
Probab=99.98 E-value=5.7e-32 Score=261.65 Aligned_cols=272 Identities=22% Similarity=0.415 Sum_probs=236.1
Q ss_pred EEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEE
Q psy4876 272 LNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYML 350 (609)
Q Consensus 272 v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~L 350 (609)
|.|+.+..+.+++|..|++|+|||..+ . ..+..+. |.+.|.|+.|. .+.|
T Consensus 200 VYClQYDD~kiVSGlrDnTikiWD~n~-------------------------~--~c~~~L~GHtGSVLCLqyd--~rvi 250 (499)
T KOG0281|consen 200 VYCLQYDDEKIVSGLRDNTIKIWDKNS-------------------------L--ECLKILTGHTGSVLCLQYD--ERVI 250 (499)
T ss_pred eEEEEecchhhhcccccCceEEecccc-------------------------H--HHHHhhhcCCCcEEeeecc--ceEE
Confidence 788999888899999999999999977 3 3344444 99999999985 4599
Q ss_pred EEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCC--eeEEEEccCCCCeEEEEEcc
Q psy4876 351 GVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRD--HKVALLQNHTQEVCGLKWSP 428 (609)
Q Consensus 351 asgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~--~~~~~~~~h~~~V~~l~~sp 428 (609)
++|++|.+|+|||+++++.+.++-+|...|..+.|+..++++++.|.+|.+||+.... .....+.+|...|+.+.|+
T Consensus 251 isGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd- 329 (499)
T KOG0281|consen 251 VSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD- 329 (499)
T ss_pred EecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc-
Confidence 9999999999999999999999999999999999999999999999999999998754 2345677999999999996
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc
Q psy4876 429 DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID 508 (609)
Q Consensus 429 dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~ 508 (609)
.+++++++.|.+|++|++.++ +.++++.+|...|-|+.+. ..++++| +.|.+|++||+..|.|+..++
T Consensus 330 -~kyIVsASgDRTikvW~~st~------efvRtl~gHkRGIAClQYr---~rlvVSG--SSDntIRlwdi~~G~cLRvLe 397 (499)
T KOG0281|consen 330 -DKYIVSASGDRTIKVWSTSTC------EFVRTLNGHKRGIACLQYR---DRLVVSG--SSDNTIRLWDIECGACLRVLE 397 (499)
T ss_pred -cceEEEecCCceEEEEeccce------eeehhhhcccccceehhcc---CeEEEec--CCCceEEEEeccccHHHHHHh
Confidence 569999999999999999998 8999999999999998874 3677776 699999999999999999999
Q ss_pred CCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc---------eEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCE
Q psy4876 509 TKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV---------KVAELHGHSARVLNLAMSPDETTVLSAGADETL 578 (609)
Q Consensus 509 ~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~---------~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I 578 (609)
+|. -|.++.|. .+.+++ |..||+|+|||+..+. ++..+..|+++|..+.| |...+++++.|.+|
T Consensus 398 GHEeLvRciRFd--~krIVS--GaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtI 471 (499)
T KOG0281|consen 398 GHEELVRCIRFD--NKRIVS--GAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTI 471 (499)
T ss_pred chHHhhhheeec--Cceeee--ccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeE
Confidence 886 68888884 467777 6689999999997653 34455679999999999 67789999999999
Q ss_pred EEEEcCCCccchh
Q psy4876 579 RLWKIFEKVKSKK 591 (609)
Q Consensus 579 ~iWdl~~~~~~~k 591 (609)
.|||+.++.+...
T Consensus 472 LiWdFl~~~~~~~ 484 (499)
T KOG0281|consen 472 LIWDFLNGPPSAA 484 (499)
T ss_pred EEEEcCCCCcccc
Confidence 9999998877643
No 29
>KOG0286|consensus
Probab=99.98 E-value=1.7e-29 Score=240.27 Aligned_cols=252 Identities=16% Similarity=0.286 Sum_probs=227.3
Q ss_pred eeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCC
Q psy4876 330 MDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRS 406 (609)
Q Consensus 330 ~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~ 406 (609)
..+. |.+.|.++.|++|+++|++++.||.+.|||.-+...+..+.-....|..++| +++++++|+.|....||++.+
T Consensus 49 r~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~ 128 (343)
T KOG0286|consen 49 RTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLST 128 (343)
T ss_pred EEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEeccc
Confidence 4566 9999999999999999999999999999999999999999989999999999 689999999999999999986
Q ss_pred CC-----eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcE
Q psy4876 407 RD-----HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 407 ~~-----~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 481 (609)
.+ .....+.+|++.+.++.|.+|+ +|++++.|.++.+||++++ +.+..|.+|.+.|.+|++.|...+.
T Consensus 129 ~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SGD~TCalWDie~g------~~~~~f~GH~gDV~slsl~p~~~nt 201 (343)
T KOG0286|consen 129 RDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGSGDMTCALWDIETG------QQTQVFHGHTGDVMSLSLSPSDGNT 201 (343)
T ss_pred ccccccceeeeeecCccceeEEEEEcCCC-ceEecCCCceEEEEEcccc------eEEEEecCCcccEEEEecCCCCCCe
Confidence 52 3456688999999999998855 7899999999999999999 8899999999999999999966688
Q ss_pred EEEEeccCCCeEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC--CCCCEE
Q psy4876 482 LASGGGTADRHIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG--HSARVL 558 (609)
Q Consensus 482 lasggGs~Dg~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~--h~~~V~ 558 (609)
+++|+ -|+..++||++.+.++++|.+| +.|.++.|.|+|.-+++ |++|++.++||++....+..+.. -..+|+
T Consensus 202 FvSg~--cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afat--GSDD~tcRlyDlRaD~~~a~ys~~~~~~git 277 (343)
T KOG0286|consen 202 FVSGG--CDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFAT--GSDDATCRLYDLRADQELAVYSHDSIICGIT 277 (343)
T ss_pred EEecc--cccceeeeeccCcceeEeecccccccceEEEccCCCeeee--cCCCceeEEEeecCCcEEeeeccCcccCCce
Confidence 88875 8999999999999999999877 58999999999999998 77999999999999999888863 236799
Q ss_pred EEEEeCCCCEEEEEECCCCEEEEEcCCCccchhh
Q psy4876 559 NLAMSPDETTVLSAGADETLRLWKIFEKVKSKKK 592 (609)
Q Consensus 559 ~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~ 592 (609)
+++||-.|++|++|..|.++.+||.-.++.....
T Consensus 278 Sv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L 311 (343)
T KOG0286|consen 278 SVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVL 311 (343)
T ss_pred eEEEcccccEEEeeecCCceeEeeccccceEEEe
Confidence 9999999999999999999999999877655443
No 30
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=4.4e-29 Score=289.38 Aligned_cols=283 Identities=16% Similarity=0.285 Sum_probs=227.0
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccC
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQE 346 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spd 346 (609)
...|.+++|+|++ +++++.|+.|+||+........ . ........+.+...|.+++|++.
T Consensus 483 ~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~---------~----------~~~~~~~~~~~~~~v~~l~~~~~ 543 (793)
T PLN00181 483 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDG---------R----------DIHYPVVELASRSKLSGICWNSY 543 (793)
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccc---------c----------ccccceEEecccCceeeEEeccC
Confidence 4569999999986 6678899999999986410000 0 00112223335578999999875
Q ss_pred -CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeE
Q psy4876 347 -GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVC 422 (609)
Q Consensus 347 -g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 422 (609)
+.+||+++.||.|+|||+.+++.+..+.+|...|.+++|+ +.+|++|+.||.|++||++++. .+..+..+ ..|.
T Consensus 544 ~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~-~~~~~~~~-~~v~ 621 (793)
T PLN00181 544 IKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV-SIGTIKTK-ANIC 621 (793)
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc-EEEEEecC-CCeE
Confidence 6899999999999999999999999999999999999994 5799999999999999999864 56666544 6799
Q ss_pred EEEEc-cCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC
Q psy4876 423 GLKWS-PDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG 501 (609)
Q Consensus 423 ~l~~s-pdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~ 501 (609)
++.|+ ++|.+|++|+.||.|++||++... .++..+.+|...|.++.|. ++ ..+++++ .|+.|++||+..+
T Consensus 622 ~v~~~~~~g~~latgs~dg~I~iwD~~~~~-----~~~~~~~~h~~~V~~v~f~-~~-~~lvs~s--~D~~ikiWd~~~~ 692 (793)
T PLN00181 622 CVQFPSESGRSLAFGSADHKVYYYDLRNPK-----LPLCTMIGHSKTVSYVRFV-DS-STLVSSS--TDNTLKLWDLSMS 692 (793)
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCC-----ccceEecCCCCCEEEEEEe-CC-CEEEEEE--CCCEEEEEeCCCC
Confidence 99995 579999999999999999998762 3567778999999999997 34 3566653 7999999999743
Q ss_pred ------ceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEE-------------eCCCCCEEEEE
Q psy4876 502 ------ACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL-------------HGHSARVLNLA 561 (609)
Q Consensus 502 ------~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l-------------~~h~~~V~~l~ 561 (609)
.++..+..+. .+..+.|++++.+|++ |+.|+.|+||+......+..+ ..|...|.+++
T Consensus 693 ~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~las--gs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ 770 (793)
T PLN00181 693 ISGINETPLHSFMGHTNVKNFVGLSVSDGYIAT--GSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVC 770 (793)
T ss_pred ccccCCcceEEEcCCCCCeeEEEEcCCCCEEEE--EeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEE
Confidence 5677777654 6889999999999988 558999999998655433222 23456799999
Q ss_pred EeCCCCEEEEEECCCCEEEEEc
Q psy4876 562 MSPDETTVLSAGADETLRLWKI 583 (609)
Q Consensus 562 ~spdg~~L~s~s~Dg~I~iWdl 583 (609)
|+|++..|++|+.||.|+||++
T Consensus 771 ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 771 WRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EcCCCCeEEEecCCCcEEEEec
Confidence 9999999999999999999997
No 31
>KOG0284|consensus
Probab=99.97 E-value=2.3e-31 Score=262.79 Aligned_cols=243 Identities=24% Similarity=0.425 Sum_probs=216.7
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
....|..|.|.|+|+.|++|+..|.+.+|+..+-.....++.|+..|.++.| ++.++++|+.+|.|++|+.... .+
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn--nV 172 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN--NV 172 (464)
T ss_pred cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh--hh
Confidence 4568999999999999999999999999998766666677899999999999 6899999999999999998764 45
Q ss_pred EEEccCC-CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCC
Q psy4876 412 ALLQNHT-QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTAD 490 (609)
Q Consensus 412 ~~~~~h~-~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~D 490 (609)
..+..|. ..|++++|+|....|++++.||+|+|||.... +....+.+|...|++++|+|.. .++++|| .|
T Consensus 173 k~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~------kee~vL~GHgwdVksvdWHP~k-gLiasgs--kD 243 (464)
T KOG0284|consen 173 KIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMP------KEERVLRGHGWDVKSVDWHPTK-GLIASGS--KD 243 (464)
T ss_pred HHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCC------chhheeccCCCCcceeccCCcc-ceeEEcc--CC
Confidence 5555555 89999999999999999999999999999987 5666779999999999999975 6888874 89
Q ss_pred CeEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeC-CCCE
Q psy4876 491 RHIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSP-DETT 568 (609)
Q Consensus 491 g~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~sp-dg~~ 568 (609)
..|++||.++|.|+.++..+ ..|..+.|++++++|++ ++.|..+++||+++++.+..+++|...|+++.|+| ...+
T Consensus 244 nlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt--~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~l 321 (464)
T KOG0284|consen 244 NLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLT--GSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESL 321 (464)
T ss_pred ceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEE--ccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccc
Confidence 99999999999999999766 48999999999999999 45899999999999999999999999999999999 4568
Q ss_pred EEEEECCCCEEEEEcCCCccc
Q psy4876 569 VLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 569 L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
|.+|+.||.|..|.+...++.
T Consensus 322 ftsgg~Dgsvvh~~v~~~~p~ 342 (464)
T KOG0284|consen 322 FTSGGSDGSVVHWVVGLEEPL 342 (464)
T ss_pred eeeccCCCceEEEeccccccc
Confidence 889999999999999844443
No 32
>KOG0276|consensus
Probab=99.97 E-value=8.7e-30 Score=262.75 Aligned_cols=280 Identities=17% Similarity=0.294 Sum_probs=247.0
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
.|.+++++|.. +|++-..|.|.|||.++ .. .+..++ .+.+|.+..|-+..
T Consensus 15 RVKsVd~HPtePw~la~LynG~V~IWnyet-------------------------qt--mVksfeV~~~PvRa~kfiaRk 67 (794)
T KOG0276|consen 15 RVKSVDFHPTEPWILAALYNGDVQIWNYET-------------------------QT--MVKSFEVSEVPVRAAKFIARK 67 (794)
T ss_pred ceeeeecCCCCceEEEeeecCeeEEEeccc-------------------------ce--eeeeeeecccchhhheeeecc
Confidence 47889999986 77888899999999988 33 334444 67899999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecC--CEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT--YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
+++++|+.|..|+||+..+++.+..+..|..-|.+++.++ .++++++.|-+|++||.+....+.+++.+|+..|.+++
T Consensus 68 nWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~ 147 (794)
T KOG0276|consen 68 NWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVA 147 (794)
T ss_pred ceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEE
Confidence 9999999999999999999999999999999999999975 68999999999999999998888999999999999999
Q ss_pred Ecc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCC-cEEEEEeccCCCeEEEEECCCCce
Q psy4876 426 WSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSP-NVLASGGGTADRHIYFWNVSSGAC 503 (609)
Q Consensus 426 ~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~llasggGs~Dg~I~iwd~~t~~~ 503 (609)
|+| |.+.||+++-|++|+||.+.+. .+..++.+|...|.|+.+-+-|. -.+++| ++|..|+|||..+..|
T Consensus 148 fnPkD~ntFaS~sLDrTVKVWslgs~------~~nfTl~gHekGVN~Vdyy~~gdkpylIsg--aDD~tiKvWDyQtk~C 219 (794)
T KOG0276|consen 148 FNPKDPNTFASASLDRTVKVWSLGSP------HPNFTLEGHEKGVNCVDYYTGGDKPYLISG--ADDLTIKVWDYQTKSC 219 (794)
T ss_pred ecCCCccceeeeeccccEEEEEcCCC------CCceeeeccccCcceEEeccCCCcceEEec--CCCceEEEeecchHHH
Confidence 999 7889999999999999999887 78999999999999999988653 356665 5999999999999999
Q ss_pred eEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEE
Q psy4876 504 LDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWK 582 (609)
Q Consensus 504 ~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWd 582 (609)
++++++|. .|..+.|+|.-..+++ |++||+++||+..+.+....+.-.-++|+||+-.+.+..++.|...|.|. .+
T Consensus 220 V~TLeGHt~Nvs~v~fhp~lpiiis--gsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~-v~ 296 (794)
T KOG0276|consen 220 VQTLEGHTNNVSFVFFHPELPIIIS--GSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVT-VK 296 (794)
T ss_pred HHHhhcccccceEEEecCCCcEEEE--ecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEE-EE
Confidence 99999875 8999999999999988 66999999999999888888877778999999999888888877666654 34
Q ss_pred cCCCcc
Q psy4876 583 IFEKVK 588 (609)
Q Consensus 583 l~~~~~ 588 (609)
+-..++
T Consensus 297 lgreeP 302 (794)
T KOG0276|consen 297 LGREEP 302 (794)
T ss_pred ccCCCC
Confidence 444433
No 33
>KOG0285|consensus
Probab=99.97 E-value=2.8e-30 Score=251.07 Aligned_cols=253 Identities=21% Similarity=0.343 Sum_probs=229.3
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
|.+.|.||++.|...++++|+.|++|.|||+.++++..++.+|...|..++++ ..+|++++.|+.|+.||+... +.+
T Consensus 150 HlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~n-kvI 228 (460)
T KOG0285|consen 150 HLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYN-KVI 228 (460)
T ss_pred ccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhh-hhH
Confidence 89999999999999999999999999999999999999999999999999995 468999999999999999987 588
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
+.+.+|-+.|.|++.+|.-..|++|+.|.+++|||+++. ..++.+.+|..+|..+.+.|..+.++. | +.|+
T Consensus 229 R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr------~~V~~l~GH~~~V~~V~~~~~dpqvit-~--S~D~ 299 (460)
T KOG0285|consen 229 RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR------ASVHVLSGHTNPVASVMCQPTDPQVIT-G--SHDS 299 (460)
T ss_pred HHhccccceeEEEeccccceeEEecCCcceEEEeeeccc------ceEEEecCCCCcceeEEeecCCCceEE-e--cCCc
Confidence 889999999999999999999999999999999999998 789999999999999999998876654 3 5999
Q ss_pred eEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEE
Q psy4876 492 HIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVL 570 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~ 570 (609)
+|++||++.|+...++.++. .+.+++.+|....+++++ ...|+-|+++.+..+..+.+|..-|++++...|| +++
T Consensus 300 tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas---~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~ 375 (460)
T KOG0285|consen 300 TVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASAS---PDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLV 375 (460)
T ss_pred eEEEeeeccCceeEeeecccceeeEEecCCchhhhhccC---CccceeccCCccchhhccccccceeeeeeeccCc-eEE
Confidence 99999999999888887664 899999999998888853 5679999999999999999999999999998776 788
Q ss_pred EEECCCCEEEEEcCCCccchhhhhhccccc
Q psy4876 571 SAGADETLRLWKIFEKVKSKKKEIKNNASK 600 (609)
Q Consensus 571 s~s~Dg~I~iWdl~~~~~~~k~~~~~~~~~ 600 (609)
+|+..|.|.+||...+..-+..+......+
T Consensus 376 ~G~dng~~~fwdwksg~nyQ~~~t~vqpGS 405 (460)
T KOG0285|consen 376 SGGDNGSIMFWDWKSGHNYQRGQTIVQPGS 405 (460)
T ss_pred EcCCceEEEEEecCcCcccccccccccCCc
Confidence 999999999999999887776654444333
No 34
>KOG0266|consensus
Probab=99.97 E-value=3.9e-29 Score=270.90 Aligned_cols=250 Identities=24% Similarity=0.431 Sum_probs=222.0
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCe--eEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCe
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK--KCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~--~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
+...|+++.|+++|++|++++.++.+++|+....+ ..+.+.+|...|..++| ++.++++++.|++|++||+.....
T Consensus 158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~ 237 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGR 237 (456)
T ss_pred ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCe
Confidence 47889999999999999999999999999998777 78888999999999999 688999999999999999966557
Q ss_pred eEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 410 KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
.+.++.+|...|++++|+|+|+++++|+.|++|+|||++++ +++..+.+|...|.+++|++++. +++++ +.
T Consensus 238 ~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~------~~~~~l~~hs~~is~~~f~~d~~-~l~s~--s~ 308 (456)
T KOG0266|consen 238 NLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG------ECVRKLKGHSDGISGLAFSPDGN-LLVSA--SY 308 (456)
T ss_pred EEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC------eEEEeeeccCCceEEEEECCCCC-EEEEc--CC
Confidence 88999999999999999999999999999999999999998 89999999999999999999985 55555 47
Q ss_pred CCeEEEEECCCCc--eeEEEcCCC---CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCC---EEEEE
Q psy4876 490 DRHIYFWNVSSGA--CLDSIDTKS---QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSAR---VLNLA 561 (609)
Q Consensus 490 Dg~I~iwd~~t~~--~~~~~~~~~---~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~---V~~l~ 561 (609)
|+.|++||+.++. ++..+.... .++.+.|+|++.++++ +..|+.+++||+..+..+..+.+|... +.+..
T Consensus 309 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~--~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (456)
T KOG0266|consen 309 DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLS--ASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPT 386 (456)
T ss_pred CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEE--ecCCCeEEEEEccCCcceeeecccCCcceeEeccc
Confidence 9999999999999 556665432 5899999999999999 448999999999999999999999875 34445
Q ss_pred EeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 562 MSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 562 ~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
+++.+.++++|+.|+.|++|++.++....+.+.
T Consensus 387 ~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~ 419 (456)
T KOG0266|consen 387 LSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEG 419 (456)
T ss_pred ccCCCCeEEEEeCCceEEEEeCCccchhhhhcC
Confidence 678999999999999999999998665554443
No 35
>KOG0318|consensus
Probab=99.97 E-value=3.3e-28 Score=247.21 Aligned_cols=281 Identities=19% Similarity=0.383 Sum_probs=235.6
Q ss_pred eeEEEEEecCCCeEE--EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHFNVLA--VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~~lla--~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
..++...+||.|... +...|.|+|||... .....-.++. ..++|.+++|+.+
T Consensus 60 ~~vtVAkySPsG~yiASGD~sG~vRIWdtt~-------------------------~~hiLKnef~v~aG~I~Di~Wd~d 114 (603)
T KOG0318|consen 60 HQVTVAKYSPSGFYIASGDVSGKVRIWDTTQ-------------------------KEHILKNEFQVLAGPIKDISWDFD 114 (603)
T ss_pred ceeEEEEeCCCceEEeecCCcCcEEEEeccC-------------------------cceeeeeeeeecccccccceeCCC
Confidence 447778899998443 33459999999876 4444444555 6899999999999
Q ss_pred CCEEEEEeCC----CeEEEEeCCCCeeEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCC
Q psy4876 347 GYMLGVGTSL----GTVQLWDVSAKKKCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQ 419 (609)
Q Consensus 347 g~~Lasgs~d----g~I~iwd~~~~~~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 419 (609)
+++|++.+.. |.+.+|| +|..+..+.+|...|.++.| .+..+++|++|++|.+|+-.-- +....+..|..
T Consensus 115 s~RI~avGEGrerfg~~F~~D--SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPF-KFk~s~r~Hsk 191 (603)
T KOG0318|consen 115 SKRIAAVGEGRERFGHVFLWD--SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPF-KFKSSFREHSK 191 (603)
T ss_pred CcEEEEEecCccceeEEEEec--CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCe-eeeeccccccc
Confidence 9888876543 3455665 77889999999999999999 4689999999999999986543 34556778999
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec---CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEE
Q psy4876 420 EVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS---RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFW 496 (609)
Q Consensus 420 ~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iw 496 (609)
-|.|+.|+|||.+||+++.||.|.+||-.++ +.+..+. +|.+.|.+|+|+||+..++.++ .|.+++||
T Consensus 192 FV~~VRysPDG~~Fat~gsDgki~iyDGktg------e~vg~l~~~~aHkGsIfalsWsPDs~~~~T~S---aDkt~KIW 262 (603)
T KOG0318|consen 192 FVNCVRYSPDGSRFATAGSDGKIYIYDGKTG------EKVGELEDSDAHKGSIFALSWSPDSTQFLTVS---ADKTIKIW 262 (603)
T ss_pred ceeeEEECCCCCeEEEecCCccEEEEcCCCc------cEEEEecCCCCccccEEEEEECCCCceEEEec---CCceEEEE
Confidence 9999999999999999999999999999998 6777776 8999999999999998777664 79999999
Q ss_pred ECCCCceeEEEcCCC----CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEE
Q psy4876 497 NVSSGACLDSIDTKS----QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSA 572 (609)
Q Consensus 497 d~~t~~~~~~~~~~~----~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~ 572 (609)
|+.+.+++.++.... +...+.|- ...|++.+ .+|.|.+++...+..+..+.||...|+++..++|+++|++|
T Consensus 263 dVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lItVS--l~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sg 338 (603)
T KOG0318|consen 263 DVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLITVS--LSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSG 338 (603)
T ss_pred EeeccceEEEeecCCchhceEEEEEEe--CCeEEEEE--cCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEee
Confidence 999999999987553 55667777 44566654 68999999999999999999999999999999999999999
Q ss_pred ECCCCEEEEEcCCCccchh
Q psy4876 573 GADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 573 s~Dg~I~iWdl~~~~~~~k 591 (609)
+.||.|.-|+...+..-+.
T Consensus 339 syDG~I~~W~~~~g~~~~~ 357 (603)
T KOG0318|consen 339 SYDGHINSWDSGSGTSDRL 357 (603)
T ss_pred ccCceEEEEecCCcccccc
Confidence 9999999999988776543
No 36
>KOG0277|consensus
Probab=99.97 E-value=2.6e-29 Score=234.61 Aligned_cols=263 Identities=21% Similarity=0.361 Sum_probs=223.7
Q ss_pred cCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCC
Q psy4876 287 LGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVS 365 (609)
Q Consensus 287 ~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg-~~Lasgs~dg~I~iwd~~ 365 (609)
..|.+.|.++... +.+.....+...+.+..|+|++.. +.+++++.||.++|||+.
T Consensus 36 G~G~L~ile~~~~------------------------~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 36 GNGRLFILEVTDP------------------------KGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred cCceEEEEecCCC------------------------CCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 3689999998641 566777777778999999999975 788899999999999964
Q ss_pred C-CeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCC
Q psy4876 366 A-KKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP-DGRYLASGGNDN 440 (609)
Q Consensus 366 ~-~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg 440 (609)
. ...+..++.|...|.++.|+ ...+++++.||+|++|+.... ..+.++.+|...|...+|+| .+++|++++.|+
T Consensus 92 ~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~-~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~ 170 (311)
T KOG0277|consen 92 MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP-NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDG 170 (311)
T ss_pred CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCC-cceEeecCCccEEEEEecCCCCCCeEEEccCCc
Confidence 3 36788999999999999995 678888899999999999876 57889999999999999999 788999999999
Q ss_pred cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC-ceeEEEcCCC-CeEEEEE
Q psy4876 441 LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG-ACLDSIDTKS-QVCALLW 518 (609)
Q Consensus 441 ~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~-~~~~~~~~~~-~v~sl~~ 518 (609)
++++||++... +.+ .+..|...|.++.|+....+++++|+ .|+.|+.||+++- .++.++..++ .|..+.|
T Consensus 171 ~l~lwdvr~~g-----k~~-~i~ah~~Eil~cdw~ky~~~vl~Tg~--vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~ 242 (311)
T KOG0277|consen 171 TLRLWDVRSPG-----KFM-SIEAHNSEILCCDWSKYNHNVLATGG--VDNLVRGWDIRNLRTPLFELNGHGLAVRKVKF 242 (311)
T ss_pred eEEEEEecCCC-----cee-EEEeccceeEeecccccCCcEEEecC--CCceEEEEehhhccccceeecCCceEEEEEec
Confidence 99999998762 333 48889999999999999999999985 8999999999864 4667776665 8999999
Q ss_pred cCCCCeEEEEEecCCCeEEEEECCCC-ceEEEEeCCCCCEEEEEEeC-CCCEEEEEECCCCEEEEEc
Q psy4876 519 NSDYKELVSAHGFAQNQLIIWKYPSL-VKVAELHGHSARVLNLAMSP-DETTVLSAGADETLRLWKI 583 (609)
Q Consensus 519 s~~g~~l~~~sG~~dg~I~Iwd~~~~-~~~~~l~~h~~~V~~l~~sp-dg~~L~s~s~Dg~I~iWdl 583 (609)
+|...-+++.+ +.|-+++|||.... ..+.....|++-|..+.|++ ++.++|+++-|+.++||+-
T Consensus 243 Sph~~~lLaSa-sYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 243 SPHHASLLASA-SYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred CcchhhHhhhc-cccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 99876665543 37999999999744 44555667899999999998 6779999999999999983
No 37
>KOG0319|consensus
Probab=99.97 E-value=3.2e-29 Score=263.54 Aligned_cols=272 Identities=22% Similarity=0.325 Sum_probs=233.3
Q ss_pred ecCC-CeEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEE
Q psy4876 277 WSHF-NVLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVG 353 (609)
Q Consensus 277 wsp~-~lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasg 353 (609)
|.|+ ..+| ++..+.+++++..+ ..+. -+. |.+.|.++....+|.+|++|
T Consensus 332 lG~e~~~laVATNs~~lr~y~~~~-------------------------~~c~---ii~GH~e~vlSL~~~~~g~llat~ 383 (775)
T KOG0319|consen 332 LGPEESHLAVATNSPELRLYTLPT-------------------------SYCQ---IIPGHTEAVLSLDVWSSGDLLATG 383 (775)
T ss_pred cCCccceEEEEeCCCceEEEecCC-------------------------CceE---EEeCchhheeeeeecccCcEEEEe
Confidence 4554 3444 55568899998877 4444 223 99999999966778999999
Q ss_pred eCCCeEEEEeCCCC----eeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCC----eeEE----EEccCC
Q psy4876 354 TSLGTVQLWDVSAK----KKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRD----HKVA----LLQNHT 418 (609)
Q Consensus 354 s~dg~I~iwd~~~~----~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~----~~~~----~~~~h~ 418 (609)
+.|.++++|.++.+ .++....+|...|.+++++ ..+|++++.|++|++|++.... .... +...|.
T Consensus 384 sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHd 463 (775)
T KOG0319|consen 384 SKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHD 463 (775)
T ss_pred cCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhc
Confidence 99999999988543 3456678999999999994 5899999999999999998621 1111 334799
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEEC
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNV 498 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~ 498 (609)
..|++++++|+..+||+||.|.+.+||++... .....+.+|...|.++.|+|.. .+++++ |.|++|+||.+
T Consensus 464 KdIN~Vaia~ndkLiAT~SqDktaKiW~le~~------~l~~vLsGH~RGvw~V~Fs~~d-q~laT~--SgD~TvKIW~i 534 (775)
T KOG0319|consen 464 KDINCVAIAPNDKLIATGSQDKTAKIWDLEQL------RLLGVLSGHTRGVWCVSFSKND-QLLATC--SGDKTVKIWSI 534 (775)
T ss_pred ccccceEecCCCceEEecccccceeeecccCc------eEEEEeeCCccceEEEEecccc-ceeEec--cCCceEEEEEe
Confidence 99999999999999999999999999999976 8899999999999999999976 578887 47999999999
Q ss_pred CCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCC
Q psy4876 499 SSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADET 577 (609)
Q Consensus 499 ~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~ 577 (609)
.+..|++++++| ..|..+.|-.+|+.|++++ .||-|+||++.+.+++..+.+|.++|++++.++++..++||+.||.
T Consensus 535 s~fSClkT~eGH~~aVlra~F~~~~~qliS~~--adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~ 612 (775)
T KOG0319|consen 535 STFSCLKTFEGHTSAVLRASFIRNGKQLISAG--ADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGR 612 (775)
T ss_pred ccceeeeeecCccceeEeeeeeeCCcEEEecc--CCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeE
Confidence 999999999976 5899999999999999954 8999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCc
Q psy4876 578 LRLWKIFEKV 587 (609)
Q Consensus 578 I~iWdl~~~~ 587 (609)
|.+|.=.+.+
T Consensus 613 i~~wkD~Te~ 622 (775)
T KOG0319|consen 613 IIFWKDVTEE 622 (775)
T ss_pred EEEeecCcHH
Confidence 9999755433
No 38
>KOG0282|consensus
Probab=99.97 E-value=6.1e-30 Score=257.84 Aligned_cols=273 Identities=18% Similarity=0.315 Sum_probs=231.2
Q ss_pred eEEEEEecCC-C--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 271 YLNLIDWSHF-N--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 271 ~v~~l~wsp~-~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
.|+++.|.|- + +|+++.|+.|+||++-. ...++.++. |..+|.+++|+.+
T Consensus 216 gvsai~~fp~~~hLlLS~gmD~~vklW~vy~--------------------------~~~~lrtf~gH~k~Vrd~~~s~~ 269 (503)
T KOG0282|consen 216 GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD--------------------------DRRCLRTFKGHRKPVRDASFNNC 269 (503)
T ss_pred ccchhhhccceeeEEEecCCCceEEEEEEec--------------------------Ccceehhhhcchhhhhhhhcccc
Confidence 4889999994 4 77799999999999875 234666777 9999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCG 423 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 423 (609)
|..+.+++.|+.|++||+++|+++..+. -...++|+.|+ .+.+++|+.|+.|+.||+++++ .++.+..|-+.|..
T Consensus 270 g~~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k-vvqeYd~hLg~i~~ 347 (503)
T KOG0282|consen 270 GTSFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK-VVQEYDRHLGAILD 347 (503)
T ss_pred CCeeeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchH-HHHHHHhhhhheee
Confidence 9999999999999999999999999987 45678899993 4899999999999999999984 78888889999999
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEee-cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc
Q psy4876 424 LKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL-SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA 502 (609)
Q Consensus 424 l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~ 502 (609)
+.|-++|+++++.+.|+.|+||+.+.. .++... ..+.....++..+|+++.+++= +.|..|.+|.+...-
T Consensus 348 i~F~~~g~rFissSDdks~riWe~~~~------v~ik~i~~~~~hsmP~~~~~P~~~~~~aQ---s~dN~i~ifs~~~~~ 418 (503)
T KOG0282|consen 348 ITFVDEGRRFISSSDDKSVRIWENRIP------VPIKNIADPEMHTMPCLTLHPNGKWFAAQ---SMDNYIAIFSTVPPF 418 (503)
T ss_pred eEEccCCceEeeeccCccEEEEEcCCC------ccchhhcchhhccCcceecCCCCCeehhh---ccCceEEEEeccccc
Confidence 999999999999999999999999877 333222 2233456789999999755553 589999999875322
Q ss_pred e---eEEEcCC---CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCC-CEEEEEECC
Q psy4876 503 C---LDSIDTK---SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDE-TTVLSAGAD 575 (609)
Q Consensus 503 ~---~~~~~~~---~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg-~~L~s~s~D 575 (609)
. ...++++ +-.+.+.|||||.+|++ |..+|.+.+||..+.+.+..+++|...+..+.|+|.. ..|||++.|
T Consensus 419 r~nkkK~feGh~vaGys~~v~fSpDG~~l~S--GdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~ 496 (503)
T KOG0282|consen 419 RLNKKKRFEGHSVAGYSCQVDFSPDGRTLCS--GDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWD 496 (503)
T ss_pred ccCHhhhhcceeccCceeeEEEcCCCCeEEe--ecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccC
Confidence 1 2233333 46789999999999999 7789999999999999999999999999999999964 489999999
Q ss_pred CCEEEEE
Q psy4876 576 ETLRLWK 582 (609)
Q Consensus 576 g~I~iWd 582 (609)
|.|++|+
T Consensus 497 G~Ikiwd 503 (503)
T KOG0282|consen 497 GLIKIWD 503 (503)
T ss_pred ceeEecC
Confidence 9999996
No 39
>KOG0281|consensus
Probab=99.97 E-value=1e-30 Score=253.03 Aligned_cols=237 Identities=20% Similarity=0.383 Sum_probs=210.3
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVAL 413 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~ 413 (609)
....|.|+.+. ...+++|..|.+|+|||..+..+++.+.||.+.|.|+.|+...+++|+.|.+|++||+.++ +++.+
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tg-e~l~t 272 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTG-EPLNT 272 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCC-chhhH
Confidence 45689999984 5588999999999999999999999999999999999999999999999999999999998 58889
Q ss_pred EccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeE
Q psy4876 414 LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHI 493 (609)
Q Consensus 414 ~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I 493 (609)
+.+|...|..+.|+ ..++++++.|.+|.+||+..... ....+.+.+|.++|..+.|+. .+++++ +.|++|
T Consensus 273 lihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~---it~rrVLvGHrAaVNvVdfd~---kyIVsA--SgDRTi 342 (499)
T KOG0281|consen 273 LIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTD---ITLRRVLVGHRAAVNVVDFDD---KYIVSA--SGDRTI 342 (499)
T ss_pred HhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchH---HHHHHHHhhhhhheeeecccc---ceEEEe--cCCceE
Confidence 99999999999997 45999999999999999987642 255677889999999999964 367776 369999
Q ss_pred EEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEE
Q psy4876 494 YFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSA 572 (609)
Q Consensus 494 ~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~ 572 (609)
++|++.+++++.++.+|. .|.++.+ .++++++ |+.|++|++||+..|.++..+.||++-|.++.| |.+.+++|
T Consensus 343 kvW~~st~efvRtl~gHkRGIAClQY--r~rlvVS--GSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF--d~krIVSG 416 (499)
T KOG0281|consen 343 KVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVS--GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSG 416 (499)
T ss_pred EEEeccceeeehhhhcccccceehhc--cCeEEEe--cCCCceEEEEeccccHHHHHHhchHHhhhheee--cCceeeec
Confidence 999999999999998775 6777665 4566666 779999999999999999999999999999999 67899999
Q ss_pred ECCCCEEEEEcCCCccc
Q psy4876 573 GADETLRLWKIFEKVKS 589 (609)
Q Consensus 573 s~Dg~I~iWdl~~~~~~ 589 (609)
+.||+|+|||+..+...
T Consensus 417 aYDGkikvWdl~aaldp 433 (499)
T KOG0281|consen 417 AYDGKIKVWDLQAALDP 433 (499)
T ss_pred cccceEEEEecccccCC
Confidence 99999999999987654
No 40
>KOG0319|consensus
Probab=99.97 E-value=1e-28 Score=259.88 Aligned_cols=299 Identities=18% Similarity=0.342 Sum_probs=235.5
Q ss_pred cCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEE
Q psy4876 266 IQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAW 343 (609)
Q Consensus 266 ~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~ 343 (609)
..+..++.+++..||+ ++++.....+++|++.+ +.+...+...|.++|.-++|
T Consensus 59 ~ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~t-------------------------gk~irswKa~He~Pvi~ma~ 113 (775)
T KOG0319|consen 59 NEDEDEITALALTPDEEVLVTASRSQLLRVWSLPT-------------------------GKLIRSWKAIHEAPVITMAF 113 (775)
T ss_pred ccchhhhheeeecCCccEEEEeeccceEEEEEccc-------------------------chHhHhHhhccCCCeEEEEE
Confidence 3445568889999986 77788899999999999 66555555559999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecC----CEEEEEecCCeEEEEEcCCCCeeEEEEccCCC
Q psy4876 344 IQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT----YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQ 419 (609)
Q Consensus 344 spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~----~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 419 (609)
+|.|..|++|+.||.|+|||+..+.+...|.||.+.|.++.|++ .+|++|..|+.+++||+.....++..+..|.+
T Consensus 114 ~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S 193 (775)
T KOG0319|consen 114 DPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKS 193 (775)
T ss_pred cCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999964 57899999999999999965445666677777
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCC-----------------------------------------------
Q psy4876 420 EVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQH----------------------------------------------- 452 (609)
Q Consensus 420 ~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~----------------------------------------------- 452 (609)
.|++++|++|+..+++++.|..|.|||+.+.+.
T Consensus 194 ~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~ 273 (775)
T KOG0319|consen 194 AVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCV 273 (775)
T ss_pred heeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhh
Confidence 777777777777777777777777776531100
Q ss_pred --------------------------------------------------------------------------------
Q psy4876 453 -------------------------------------------------------------------------------- 452 (609)
Q Consensus 453 -------------------------------------------------------------------------------- 452 (609)
T Consensus 274 ~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~ 353 (775)
T KOG0319|consen 274 YKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTL 353 (775)
T ss_pred hhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEec
Confidence
Q ss_pred --------------------------------------------CCCccceE----------------------------
Q psy4876 453 --------------------------------------------TFSTQPIH---------------------------- 460 (609)
Q Consensus 453 --------------------------------------------~~~~~~~~---------------------------- 460 (609)
.....++.
T Consensus 354 ~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D 433 (775)
T KOG0319|consen 354 PTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQD 433 (775)
T ss_pred CCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCC
Confidence 00000000
Q ss_pred ------------------------eecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC-CeEE
Q psy4876 461 ------------------------SLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS-QVCA 515 (609)
Q Consensus 461 ------------------------~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~s 515 (609)
....|...|++++.+|+. .|+++| +.|++.+||++.....+.++.+|. .|.+
T Consensus 434 ~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~nd-kLiAT~--SqDktaKiW~le~~~l~~vLsGH~RGvw~ 510 (775)
T KOG0319|consen 434 CTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPND-KLIATG--SQDKTAKIWDLEQLRLLGVLSGHTRGVWC 510 (775)
T ss_pred ceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCC-ceEEec--ccccceeeecccCceEEEEeeCCccceEE
Confidence 112244444444445533 355554 466667777776666777777765 8999
Q ss_pred EEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 516 LLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 516 l~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
+.|++..+.+++++ .|.+|+||.+.++.++++|.||+..|..+.|-.+|+.|+++++||.|++|++.+.++......
T Consensus 511 V~Fs~~dq~laT~S--gD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~ 587 (775)
T KOG0319|consen 511 VSFSKNDQLLATCS--GDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDA 587 (775)
T ss_pred EEeccccceeEecc--CCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhh
Confidence 99999999999977 599999999999999999999999999999999999999999999999999999998876544
No 41
>KOG0313|consensus
Probab=99.97 E-value=1.1e-28 Score=242.01 Aligned_cols=331 Identities=20% Similarity=0.326 Sum_probs=251.7
Q ss_pred hhhhhHHhhhhhhheeeeccCCcchhhhhhccCCCCCCCCCCCCccccCCCccccccCCccCCceeEEEEEecCCCeEEE
Q psy4876 206 QNLFMERIFKSLEYLLFKIKPLPHLMAIKILSNTSKTPMGSKPTSRYIPLTADRILDAPEIQNDYYLNLIDWSHFNVLAV 285 (609)
Q Consensus 206 ~~~~~e~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~r~i~~~p~~il~ap~~~~~~~v~~l~wsp~~lla~ 285 (609)
.+..+++.|..+..-.+...++.+++...-++... ........++.|..|..- +..+.+|.+|.-.+.-+|++
T Consensus 49 ~~~~K~~pFDFLi~gelLRtsL~e~l~~kgiSsE~--~leIEYv~~~~aP~pl~~-----~~hdDWVSsv~~~~~~Iltg 121 (423)
T KOG0313|consen 49 NGFWKPVPFDFLIKGELLRTSLDEHLEEKGISSEE--ILEIEYVEAITAPKPLQC-----FLHDDWVSSVKGASKWILTG 121 (423)
T ss_pred CCcCCCCcceEEEcceeeeccHHHHHHHcCcChhh--eeEEEEEEecCCCCcccc-----ccchhhhhhhcccCceEEEe
Confidence 34457777888877777777777775444333210 011111122222222222 22344578888887779999
Q ss_pred EcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC---CEEEEEeCCCeEEE
Q psy4876 286 ALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG---YMLGVGTSLGTVQL 361 (609)
Q Consensus 286 s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg---~~Lasgs~dg~I~i 361 (609)
++||.++|||... +. ...+. |.+.|.+++|.-.. ..|++++.|.++++
T Consensus 122 sYDg~~riWd~~G--------------------------k~--~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~L 173 (423)
T KOG0313|consen 122 SYDGTSRIWDLKG--------------------------KS--IKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRL 173 (423)
T ss_pred ecCCeeEEEecCC--------------------------ce--EEEEecCCcceeeeEEEecCCccceEEEecCCceEEE
Confidence 9999999999874 32 23334 99999999986533 46999999999999
Q ss_pred EeCCCCee----EEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCC------------------------CeeE
Q psy4876 362 WDVSAKKK----CRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSR------------------------DHKV 411 (609)
Q Consensus 362 wd~~~~~~----~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~------------------------~~~~ 411 (609)
|..+.+.. +..-.||...|-+++. ++..+++|+.|.+|.+|+.... ..++
T Consensus 174 w~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~ 253 (423)
T KOG0313|consen 174 WKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPL 253 (423)
T ss_pred EEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCce
Confidence 99887643 3344599999999998 6899999999999999993211 1346
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
..+.+|.++|.++.|++ ...+++++.|.+|+.||+.++ ..+..+.+ ...+.++..+|.. .||++| +.|.
T Consensus 254 vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg------~~~~~~~~-~ksl~~i~~~~~~-~Ll~~g--ssdr 322 (423)
T KOG0313|consen 254 VTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETG------GLKSTLTT-NKSLNCISYSPLS-KLLASG--SSDR 322 (423)
T ss_pred EEecccccceeeEEEcC-CCceEeecccceEEEEEeecc------cceeeeec-CcceeEeeccccc-ceeeec--CCCC
Confidence 67889999999999998 668999999999999999998 56666653 5678999999955 688876 4899
Q ss_pred eEEEEECCCCc---eeEEEcC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc-eEEEEeCCCCCEEEEEEeCCC
Q psy4876 492 HIYFWNVSSGA---CLDSIDT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV-KVAELHGHSARVLNLAMSPDE 566 (609)
Q Consensus 492 ~I~iwd~~t~~---~~~~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~-~~~~l~~h~~~V~~l~~spdg 566 (609)
.|++||.+++. ..+++.+ ...|.++.|+|...++++. |+.||++++||+++.. ++..+.+|.+.|.++.|. ++
T Consensus 323 ~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S-~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~ 400 (423)
T KOG0313|consen 323 HIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVS-GSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EG 400 (423)
T ss_pred ceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEE-EecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CC
Confidence 99999999764 2344444 4589999999998887765 6689999999999877 999999999999999997 56
Q ss_pred CEEEEEECCCCEEEEEcC
Q psy4876 567 TTVLSAGADETLRLWKIF 584 (609)
Q Consensus 567 ~~L~s~s~Dg~I~iWdl~ 584 (609)
..|++||.|.+|+|+.-.
T Consensus 401 ~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 401 GLIVSGGADNKLRIFKGS 418 (423)
T ss_pred ceEEeccCcceEEEeccc
Confidence 689999999999998754
No 42
>KOG0276|consensus
Probab=99.97 E-value=5.9e-29 Score=256.63 Aligned_cols=247 Identities=20% Similarity=0.325 Sum_probs=229.5
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
+.+.|.+|.++|....++++-.+|.|.||+.++...++.+.....+|.+..| ..+.+++|+.|..|+||+..+. ..+
T Consensus 12 rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~-ekV 90 (794)
T KOG0276|consen 12 RSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTG-EKV 90 (794)
T ss_pred cCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccc-eee
Confidence 7789999999999999999999999999999999999999999999999999 5689999999999999999998 589
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
..+..|.+.|.+|+.+|...++++++.|-+|++||.+.. ..+.+++++|...|.+++|.|...+.++++ +.|+
T Consensus 91 ~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-----wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~--sLDr 163 (794)
T KOG0276|consen 91 KTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-----WACEQTFEGHEHYVMQVAFNPKDPNTFASA--SLDR 163 (794)
T ss_pred EEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCc-----eeeeeEEcCcceEEEEEEecCCCccceeee--eccc
Confidence 999999999999999999999999999999999999876 378899999999999999999999999998 5999
Q ss_pred eEEEEECCCCceeEEEcCCC-CeEEEEEcCCC--CeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCE
Q psy4876 492 HIYFWNVSSGACLDSIDTKS-QVCALLWNSDY--KELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETT 568 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g--~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~ 568 (609)
+|++|.+.+..+..++++|. .|.++.|-+.| .+|++ |.+|..|+|||+.+..++.++.||...|..++|+|.-.+
T Consensus 164 TVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIs--gaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpi 241 (794)
T KOG0276|consen 164 TVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLIS--GADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPI 241 (794)
T ss_pred cEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEe--cCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcE
Confidence 99999999999999998775 89999998877 46666 779999999999999999999999999999999999999
Q ss_pred EEEEECCCCEEEEEcCCCccch
Q psy4876 569 VLSAGADETLRLWKIFEKVKSK 590 (609)
Q Consensus 569 L~s~s~Dg~I~iWdl~~~~~~~ 590 (609)
++||+.||+||||+-.+=..++
T Consensus 242 iisgsEDGTvriWhs~Ty~lE~ 263 (794)
T KOG0276|consen 242 IISGSEDGTVRIWNSKTYKLEK 263 (794)
T ss_pred EEEecCCccEEEecCcceehhh
Confidence 9999999999999977655443
No 43
>KOG0306|consensus
Probab=99.97 E-value=1.8e-28 Score=257.83 Aligned_cols=280 Identities=21% Similarity=0.347 Sum_probs=243.5
Q ss_pred ceeEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 269 DYYLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 269 ~~~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
+-.|..+++|.++ +++.+.++.|.||+..+ . +++.++. .+.+.+..|.|.+
T Consensus 373 R~dVRsl~vS~d~~~~~Sga~~SikiWn~~t-------------------------~--kciRTi~-~~y~l~~~Fvpgd 424 (888)
T KOG0306|consen 373 RSDVRSLCVSSDSILLASGAGESIKIWNRDT-------------------------L--KCIRTIT-CGYILASKFVPGD 424 (888)
T ss_pred hhheeEEEeecCceeeeecCCCcEEEEEccC-------------------------c--ceeEEec-cccEEEEEecCCC
Confidence 3448899999998 55677789999999987 3 3555553 4599999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCC----e--eEEEE-----
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRD----H--KVALL----- 414 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~----~--~~~~~----- 414 (609)
+++++|..+|.+.|||+.+...+.+++.|.+.|+.++. ++..+++|+.|.+|++||+.-.. . .+..+
T Consensus 425 ~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rt 504 (888)
T KOG0306|consen 425 RYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRT 504 (888)
T ss_pred ceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceE
Confidence 99999999999999999999999999999999999998 68899999999999999975211 0 11111
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEE
Q psy4876 415 QNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIY 494 (609)
Q Consensus 415 ~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~ 494 (609)
-.-...|.|+.+||||++||++--|++|+||-+++. +....+-+|.-+|.|+..+||+ .++++| +.|+.|+
T Consensus 505 Lel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtl------KFflsLYGHkLPV~smDIS~DS-klivTg--SADKnVK 575 (888)
T KOG0306|consen 505 LELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTL------KFFLSLYGHKLPVLSMDISPDS-KLIVTG--SADKNVK 575 (888)
T ss_pred EeccccEEEEEEcCCCcEEEEEeccCeEEEEEecce------eeeeeecccccceeEEeccCCc-CeEEec--cCCCceE
Confidence 123578999999999999999999999999999988 7778889999999999999998 577887 4999999
Q ss_pred EEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEE
Q psy4876 495 FWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAG 573 (609)
Q Consensus 495 iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s 573 (609)
+|-+.-|.|-+++-.| ..|.++.|.|....+++++ .|+.|+-||-...+.+..+.+|...|+|++.+|+|.++++++
T Consensus 576 iWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~g--KD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~s 653 (888)
T KOG0306|consen 576 IWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCG--KDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSS 653 (888)
T ss_pred EeccccchhhhhhhcccCceeEEEEcccceeEEEec--CcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEecc
Confidence 9999999999988765 5899999999887777753 899999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEcCCCc
Q psy4876 574 ADETLRLWKIFEKV 587 (609)
Q Consensus 574 ~Dg~I~iWdl~~~~ 587 (609)
.|.+||+|.-....
T Consensus 654 hD~sIRlwE~tde~ 667 (888)
T KOG0306|consen 654 HDKSIRLWERTDEI 667 (888)
T ss_pred CCceeEeeeccCcc
Confidence 99999999977633
No 44
>KOG0293|consensus
Probab=99.97 E-value=8.2e-29 Score=244.77 Aligned_cols=294 Identities=18% Similarity=0.246 Sum_probs=236.9
Q ss_pred cccCCCccccccCCccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceee
Q psy4876 251 RYIPLTADRILDAPEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDH 328 (609)
Q Consensus 251 r~i~~~p~~il~ap~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (609)
+-+|.....++..+ .-.|.-+.||++| +++++.|.+..||.+... ..++.
T Consensus 210 ~qip~qt~qil~~h----tdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d------------------------~~~kl 261 (519)
T KOG0293|consen 210 LQIPSQTWQILQDH----TDEVWFLQFSHNGKYLASASKDSTAIIWIVVYD------------------------VHFKL 261 (519)
T ss_pred ccCCchhhhhHhhC----CCcEEEEEEcCCCeeEeeccCCceEEEEEEecC------------------------cceee
Confidence 33455555555543 2246779999997 666888999999998762 44566
Q ss_pred eeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecC-CCCceEEEEe--cCCEEEEEecCCeEEEEEc
Q psy4876 329 LMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDG-HDVRVGALAW--NTYILSSGSRCGNIVHHDV 404 (609)
Q Consensus 329 l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~ 404 (609)
..++. |..+|..+.||||.++|++|+.+..+.+||+.+|.+...+.. |...+.+++| ++..+++|+.|++|..||+
T Consensus 262 ~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdl 341 (519)
T KOG0293|consen 262 KKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDL 341 (519)
T ss_pred eeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecC
Confidence 67777 999999999999999999999999999999999998887763 4688999999 7889999999999999999
Q ss_pred CCCCeeEEEEccCC-CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEE
Q psy4876 405 RSRDHKVALLQNHT-QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLA 483 (609)
Q Consensus 405 ~~~~~~~~~~~~h~-~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~lla 483 (609)
+.. ......+-. ..|.+++..+||+++++.+.|..|++++.++. ..+. +.....+|++++.+.++...++
T Consensus 342 Dgn--~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~------~dr~-lise~~~its~~iS~d~k~~Lv 412 (519)
T KOG0293|consen 342 DGN--ILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREAR------VDRG-LISEEQPITSFSISKDGKLALV 412 (519)
T ss_pred Ccc--hhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhh------hhhc-cccccCceeEEEEcCCCcEEEE
Confidence 864 343443332 56999999999999999999999999998865 2222 3334568999999999977776
Q ss_pred EEeccCCCeEEEEECCCCceeEEEcCCC---CeEEEEEcCC-CCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEE
Q psy4876 484 SGGGTADRHIYFWNVSSGACLDSIDTKS---QVCALLWNSD-YKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLN 559 (609)
Q Consensus 484 sggGs~Dg~I~iwd~~t~~~~~~~~~~~---~v~sl~~s~~-g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~ 559 (609)
.- .+..|++||+.....+..+.++. -+..-+|.-. ..++++ |++|++|+||+..+++.+.++.||...|++
T Consensus 413 nL---~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaS--GSED~kvyIWhr~sgkll~~LsGHs~~vNc 487 (519)
T KOG0293|consen 413 NL---QDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIAS--GSEDSKVYIWHRISGKLLAVLSGHSKTVNC 487 (519)
T ss_pred Ec---ccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEe--cCCCceEEEEEccCCceeEeecCCcceeeE
Confidence 54 79999999999888887776654 2444455443 355555 789999999999999999999999999999
Q ss_pred EEEeCC-CCEEEEEECCCCEEEEEcCCC
Q psy4876 560 LAMSPD-ETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 560 l~~spd-g~~L~s~s~Dg~I~iWdl~~~ 586 (609)
++|+|. -..+|+||.||+||||.....
T Consensus 488 VswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 488 VSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred EecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 999995 458899999999999988654
No 45
>KOG0274|consensus
Probab=99.97 E-value=4.1e-28 Score=263.05 Aligned_cols=280 Identities=23% Similarity=0.338 Sum_probs=246.0
Q ss_pred ceeEEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 269 DYYLNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 269 ~~~v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
+..+.+..|+.+.+++++.+.+|.+|+..+ +... ...+. |.+.|.++++...+
T Consensus 208 ~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~-------------------------~~~i-~~~l~GH~g~V~~l~~~~~~ 261 (537)
T KOG0274|consen 208 DHVVLCLQLHDGFFKSGSDDSTLHLWDLNN-------------------------GYLI-LTRLVGHFGGVWGLAFPSGG 261 (537)
T ss_pred cchhhhheeecCeEEecCCCceeEEeeccc-------------------------ceEE-EeeccCCCCCceeEEEecCC
Confidence 455778888877788999999999999987 4332 23355 99999999998878
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEc
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWS 427 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 427 (609)
.+|++|+.|.+++|||+.+|++...+.+|...|.++...+..+++|+.|.+|++|++.++ ..+..+.+|...|.++..+
T Consensus 262 ~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~-~~l~l~~~h~~~V~~v~~~ 340 (537)
T KOG0274|consen 262 DKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNG-ACLNLLRGHTGPVNCVQLD 340 (537)
T ss_pred CEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCc-ceEEEeccccccEEEEEec
Confidence 999999999999999999999999999999999999999999999999999999999987 5888888899999999998
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC-ceeEE
Q psy4876 428 PDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG-ACLDS 506 (609)
Q Consensus 428 pdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~-~~~~~ 506 (609)
+.++++|+.|++|.+||+.++ ++++.+.+|...|.++.+... ..+++| +.|+.|++||+++. +|+.+
T Consensus 341 --~~~lvsgs~d~~v~VW~~~~~------~cl~sl~gH~~~V~sl~~~~~--~~~~Sg--s~D~~IkvWdl~~~~~c~~t 408 (537)
T KOG0274|consen 341 --EPLLVSGSYDGTVKVWDPRTG------KCLKSLSGHTGRVYSLIVDSE--NRLLSG--SLDTTIKVWDLRTKRKCIHT 408 (537)
T ss_pred --CCEEEEEecCceEEEEEhhhc------eeeeeecCCcceEEEEEecCc--ceEEee--eeccceEeecCCchhhhhhh
Confidence 789999999999999999988 899999999999999988764 567776 48999999999999 99999
Q ss_pred EcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC-CCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 507 IDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG-HSARVLNLAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 507 ~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
+.++..+. -.....++.|++ +..|++|++||..+++++..+.+ |...|..+++. ...+++++.||++++||+..
T Consensus 409 l~~h~~~v-~~l~~~~~~Lvs--~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~ 483 (537)
T KOG0274|consen 409 LQGHTSLV-SSLLLRDNFLVS--SSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRS 483 (537)
T ss_pred hcCCcccc-cccccccceeEe--ccccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEeccc
Confidence 98887554 333445677777 55899999999999999999998 67889998886 56899999999999999999
Q ss_pred Cccchhh
Q psy4876 586 KVKSKKK 592 (609)
Q Consensus 586 ~~~~~k~ 592 (609)
+......
T Consensus 484 ~~~~~~l 490 (537)
T KOG0274|consen 484 GTLIRTL 490 (537)
T ss_pred Cchhhhh
Confidence 8887755
No 46
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=1.6e-27 Score=238.57 Aligned_cols=246 Identities=27% Similarity=0.492 Sum_probs=218.5
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
|.+.|++++|+|++++|++++.||.|.+|++.+++....+..|...+..+.|. +..|++++.+|.|.+||+... ...
T Consensus 8 h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~-~~~ 86 (289)
T cd00200 8 HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG-ECV 86 (289)
T ss_pred cCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc-cce
Confidence 88999999999999999999999999999999988888899999999999994 568999999999999999975 466
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
..+..|...|.++.|++++.++++++.|+.|.+||+.++ +....+..|...|.+++|+|++ .+++++ +.|+
T Consensus 87 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~--~~~~ 157 (289)
T cd00200 87 RTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG------KCLTTLRGHTDWVNSVAFSPDG-TFVASS--SQDG 157 (289)
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc------EEEEEeccCCCcEEEEEEcCcC-CEEEEE--cCCC
Confidence 777889999999999999999999888999999999976 6777788899999999999985 566665 3699
Q ss_pred eEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEE
Q psy4876 492 HIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVL 570 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~ 570 (609)
.|++||+++++.+..+..+. .+.++.|+++++.+++++ .++.|++||+..+..+..+..|...|.+++|+|++.+++
T Consensus 158 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 235 (289)
T cd00200 158 TIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSS--SDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLA 235 (289)
T ss_pred cEEEEEccccccceeEecCccccceEEECCCcCEEEEec--CCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEE
Confidence 99999999988888887665 899999999999988854 599999999999999988888999999999999999999
Q ss_pred EEECCCCEEEEEcCCCccchh
Q psy4876 571 SAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 571 s~s~Dg~I~iWdl~~~~~~~k 591 (609)
+++.||.|++|++........
T Consensus 236 ~~~~~~~i~i~~~~~~~~~~~ 256 (289)
T cd00200 236 SGSEDGTIRVWDLRTGECVQT 256 (289)
T ss_pred EEcCCCcEEEEEcCCceeEEE
Confidence 888899999999987554433
No 47
>KOG0278|consensus
Probab=99.96 E-value=3.5e-29 Score=233.04 Aligned_cols=278 Identities=18% Similarity=0.278 Sum_probs=246.4
Q ss_pred eEEEEEecC---CC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEc
Q psy4876 271 YLNLIDWSH---FN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWI 344 (609)
Q Consensus 271 ~v~~l~wsp---~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~s 344 (609)
.|-.|+||| +| +++++.|+.-.+-+-++ +.. +-+++ |.+.|.+....
T Consensus 16 pvvdl~~s~itp~g~flisa~kd~~pmlr~g~t-------------------------gdw--igtfeghkgavw~~~l~ 68 (334)
T KOG0278|consen 16 PVVDLAFSPITPDGYFLISASKDGKPMLRNGDT-------------------------GDW--IGTFEGHKGAVWSATLN 68 (334)
T ss_pred ceeEEeccCCCCCceEEEEeccCCCchhccCCC-------------------------CCc--EEeeeccCcceeeeecC
Confidence 356688876 56 67788899888888777 554 45666 99999999999
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeE
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVC 422 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 422 (609)
.+-..-|+++.|-+-+|||.-+|..+..+. |...|..++| +.++|++|+.+..++|||+...+.+...+.+|.+.|.
T Consensus 69 ~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir 147 (334)
T KOG0278|consen 69 KNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIR 147 (334)
T ss_pred chhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcce
Confidence 998899999999999999999999999987 9999999999 5789999999999999999988888888999999999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc
Q psy4876 423 GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA 502 (609)
Q Consensus 423 ~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~ 502 (609)
.+-|....+.|++.+.|++|++||.+++ ..++.+. -..+|+++..+++|. ++.++ ..+.|.+||..+-.
T Consensus 148 ~v~wc~eD~~iLSSadd~tVRLWD~rTg------t~v~sL~-~~s~VtSlEvs~dG~-ilTia---~gssV~Fwdaksf~ 216 (334)
T KOG0278|consen 148 TVLWCHEDKCILSSADDKTVRLWDHRTG------TEVQSLE-FNSPVTSLEVSQDGR-ILTIA---YGSSVKFWDAKSFG 216 (334)
T ss_pred eEEEeccCceEEeeccCCceEEEEeccC------cEEEEEe-cCCCCcceeeccCCC-EEEEe---cCceeEEecccccc
Confidence 9999998889999999999999999999 6666665 467899999999995 55554 57899999999999
Q ss_pred eeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEE-eCCCCCEEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 503 CLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL-HGHSARVLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 503 ~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l-~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
.++.++....|.+...+|+...+++ |..|..++.||+.+++.+..+ ++|.++|.|+.|+|||...++|+.||+||||
T Consensus 217 ~lKs~k~P~nV~SASL~P~k~~fVa--Gged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlW 294 (334)
T KOG0278|consen 217 LLKSYKMPCNVESASLHPKKEFFVA--GGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLW 294 (334)
T ss_pred ceeeccCccccccccccCCCceEEe--cCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEE
Confidence 9999999999999999999966666 679999999999999999886 8999999999999999999999999999999
Q ss_pred EcCCCccc
Q psy4876 582 KIFEKVKS 589 (609)
Q Consensus 582 dl~~~~~~ 589 (609)
....++..
T Consensus 295 Qt~~~~~~ 302 (334)
T KOG0278|consen 295 QTTPGKTY 302 (334)
T ss_pred EecCCCch
Confidence 98876654
No 48
>KOG0292|consensus
Probab=99.96 E-value=4.8e-28 Score=258.05 Aligned_cols=284 Identities=19% Similarity=0.307 Sum_probs=241.1
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
.|..|+|+|.. +|++-..|.|.+||... +. .+.++. |+++|..++|+|.+
T Consensus 11 RvKglsFHP~rPwILtslHsG~IQlWDYRM-------------------------~t--li~rFdeHdGpVRgv~FH~~q 63 (1202)
T KOG0292|consen 11 RVKGLSFHPKRPWILTSLHSGVIQLWDYRM-------------------------GT--LIDRFDEHDGPVRGVDFHPTQ 63 (1202)
T ss_pred cccceecCCCCCEEEEeecCceeeeehhhh-------------------------hh--HHhhhhccCCccceeeecCCC
Confidence 46779999987 77777799999999976 33 555666 99999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecC--CEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT--YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
.++++|+.|-.|+||+..+.+++.++.+|-.-|..+.|+. -++++++.|.+|+||+..++ .++..+.+|...|.|..
T Consensus 64 plFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr-~~iavltGHnHYVMcAq 142 (1202)
T KOG0292|consen 64 PLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSR-KCIAVLTGHNHYVMCAQ 142 (1202)
T ss_pred CeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCC-ceEEEEecCceEEEeec
Confidence 9999999999999999999999999999999999999964 68999999999999999997 58999999999999999
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCC--------------------C---CccceEeecCCcccEEEEEEcCCCCcEE
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHT--------------------F---STQPIHSLSRHQAAVKAIAWCPWSPNVL 482 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~--------------------~---~~~~~~~~~~h~~~V~~l~~sp~~~~ll 482 (609)
|+|....+++++-|.+|+|||+...... . .....+.+.+|...|.-++|+|.-+ ++
T Consensus 143 FhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp-li 221 (1202)
T KOG0292|consen 143 FHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP-LI 221 (1202)
T ss_pred cCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc-eE
Confidence 9999999999999999999998642110 0 1122356789999999999999764 77
Q ss_pred EEEeccCCCeEEEEECCCCce--eEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEE
Q psy4876 483 ASGGGTADRHIYFWNVSSGAC--LDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLN 559 (609)
Q Consensus 483 asggGs~Dg~I~iwd~~t~~~--~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~ 559 (609)
++|+ +|+.|++|.+...+. +.+..+| ..|.++.|+|....+++. ++|++|+|||+...+.+..++...++.+.
T Consensus 222 VSG~--DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSn--sEDksirVwDm~kRt~v~tfrrendRFW~ 297 (1202)
T KOG0292|consen 222 VSGA--DDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSN--SEDKSIRVWDMTKRTSVQTFRRENDRFWI 297 (1202)
T ss_pred EecC--CcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEec--CCCccEEEEecccccceeeeeccCCeEEE
Confidence 7774 999999999875442 3333344 589999999999999984 49999999999999999999888899999
Q ss_pred EEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 560 LAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 560 l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
++-+|..++++ ++.|+-+.||.+....+
T Consensus 298 laahP~lNLfA-AgHDsGm~VFkleRErp 325 (1202)
T KOG0292|consen 298 LAAHPELNLFA-AGHDSGMIVFKLERERP 325 (1202)
T ss_pred EEecCCcceee-eecCCceEEEEEcccCc
Confidence 99999998655 55777888888875443
No 49
>KOG0316|consensus
Probab=99.96 E-value=8.2e-28 Score=222.27 Aligned_cols=271 Identities=18% Similarity=0.259 Sum_probs=231.3
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
+-.|+.+.|+-+| .++++.|.+|++|+... +. .+.++. |...|..++.+.
T Consensus 17 qgaV~avryN~dGnY~ltcGsdrtvrLWNp~r-------------------------g~--liktYsghG~EVlD~~~s~ 69 (307)
T KOG0316|consen 17 QGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLR-------------------------GA--LIKTYSGHGHEVLDAALSS 69 (307)
T ss_pred ccceEEEEEccCCCEEEEcCCCceEEeecccc-------------------------cc--eeeeecCCCceeeeccccc
Confidence 3458899999986 88899999999999976 44 556666 999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCC-eeEEEEccCCCCeE
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRD-HKVALLQNHTQEVC 422 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~V~ 422 (609)
|...+++|+.|..|.+||+.+|+.++.+.+|.+.|..+.|| ...+++|+.|..+++||.+... ++++.+......|.
T Consensus 70 Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~ 149 (307)
T KOG0316|consen 70 DNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVS 149 (307)
T ss_pred cccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCcee
Confidence 99999999999999999999999999999999999999996 5899999999999999998764 56788888889999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc
Q psy4876 423 GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA 502 (609)
Q Consensus 423 ~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~ 502 (609)
++... +..|++|+.||+++.||++.| .....+ ...+|++++|+++++..|++. .|++|++.|-.+|+
T Consensus 150 Si~v~--~heIvaGS~DGtvRtydiR~G------~l~sDy--~g~pit~vs~s~d~nc~La~~---l~stlrLlDk~tGk 216 (307)
T KOG0316|consen 150 SIDVA--EHEIVAGSVDGTVRTYDIRKG------TLSSDY--FGHPITSVSFSKDGNCSLASS---LDSTLRLLDKETGK 216 (307)
T ss_pred EEEec--ccEEEeeccCCcEEEEEeecc------eeehhh--cCCcceeEEecCCCCEEEEee---ccceeeecccchhH
Confidence 99886 567999999999999999988 333333 345799999999998888764 89999999999999
Q ss_pred eeEEEcCCC---CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCC-EEEEEEeCCCCEEEEEECCCCE
Q psy4876 503 CLDSIDTKS---QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSAR-VLNLAMSPDETTVLSAGADETL 578 (609)
Q Consensus 503 ~~~~~~~~~---~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~-V~~l~~spdg~~L~s~s~Dg~I 578 (609)
.+..+.++. --..++++.....+++ |++||.|++||+.....+..+..|... |.+++++|.-..++++.. +.+
T Consensus 217 lL~sYkGhkn~eykldc~l~qsdthV~s--gSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~ 293 (307)
T KOG0316|consen 217 LLKSYKGHKNMEYKLDCCLNQSDTHVFS--GSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGD 293 (307)
T ss_pred HHHHhcccccceeeeeeeecccceeEEe--ccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cce
Confidence 999887764 2345566666666666 779999999999999999999888777 899999998887877754 456
Q ss_pred EEEE
Q psy4876 579 RLWK 582 (609)
Q Consensus 579 ~iWd 582 (609)
.+|.
T Consensus 294 ~~~~ 297 (307)
T KOG0316|consen 294 LFWY 297 (307)
T ss_pred ecee
Confidence 6664
No 50
>KOG0316|consensus
Probab=99.96 E-value=3.9e-28 Score=224.36 Aligned_cols=254 Identities=17% Similarity=0.267 Sum_probs=224.7
Q ss_pred eeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEc
Q psy4876 328 HLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDV 404 (609)
Q Consensus 328 ~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~ 404 (609)
.+..+. +.+.|..+.|+-+|+|.++++.|.+|++|+...+.+++++.+|...|..++. +...|++|+.|..|.+||+
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV 88 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV 88 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence 344455 8899999999999999999999999999999999999999999999998876 7889999999999999999
Q ss_pred CCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEE
Q psy4876 405 RSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLAS 484 (609)
Q Consensus 405 ~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llas 484 (609)
.++ +....+.+|.+.|+.++|+.+...+++|+.|..+++||.++... +|++.+......|.++.... ..+++
T Consensus 89 ~TG-kv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~----ePiQildea~D~V~Si~v~~---heIva 160 (307)
T KOG0316|consen 89 NTG-KVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF----EPIQILDEAKDGVSSIDVAE---HEIVA 160 (307)
T ss_pred ccC-eeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCC----CccchhhhhcCceeEEEecc---cEEEe
Confidence 998 58899999999999999999999999999999999999997643 78999988889999999864 45666
Q ss_pred EeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCC--EEEEEE
Q psy4876 485 GGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSAR--VLNLAM 562 (609)
Q Consensus 485 ggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~--V~~l~~ 562 (609)
| +.||+++.||++.|...... ...+|+++.|+++++..++ |.-+++|++.|-.+|+.+..++||... =.++++
T Consensus 161 G--S~DGtvRtydiR~G~l~sDy-~g~pit~vs~s~d~nc~La--~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l 235 (307)
T KOG0316|consen 161 G--SVDGTVRTYDIRKGTLSSDY-FGHPITSVSFSKDGNCSLA--SSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCL 235 (307)
T ss_pred e--ccCCcEEEEEeecceeehhh-cCCcceeEEecCCCCEEEE--eeccceeeecccchhHHHHHhcccccceeeeeeee
Confidence 5 69999999999998764332 4568999999999999998 558999999999999999999999754 456778
Q ss_pred eCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 563 SPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 563 spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
+.....+++|++||.|.+||+.+.....+...
T Consensus 236 ~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~ 267 (307)
T KOG0316|consen 236 NQSDTHVFSGSEDGKVYFWDLVDETQISKLSV 267 (307)
T ss_pred cccceeEEeccCCceEEEEEeccceeeeeecc
Confidence 88888999999999999999998877665544
No 51
>KOG0275|consensus
Probab=99.96 E-value=1.2e-28 Score=236.49 Aligned_cols=285 Identities=17% Similarity=0.292 Sum_probs=242.6
Q ss_pred CCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEE
Q psy4876 267 QNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAW 343 (609)
Q Consensus 267 ~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~ 343 (609)
....++.|-.||||+ +++++-||-|.+||..+++-.+ +-+.+..-.+- +++.|.|+.|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrK-------------------DLkYQAqd~fMMmd~aVlci~F 271 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRK-------------------DLKYQAQDNFMMMDDAVLCISF 271 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhh-------------------hhhhhhhcceeecccceEEEee
Confidence 334568889999997 7778899999999998832110 01111111222 6889999999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCeeEEEec-CCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCC
Q psy4876 344 IQEGYMLGVGTSLGTVQLWDVSAKKKCRTMD-GHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQE 420 (609)
Q Consensus 344 spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~-~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 420 (609)
+.|...||+|+.||.|+||.+.+|.+++.+. .|...|+|+.| ++..+++++.|.+++++-+..+ ..+..+++|.+.
T Consensus 272 SRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSG-K~LKEfrGHsSy 350 (508)
T KOG0275|consen 272 SRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSG-KCLKEFRGHSSY 350 (508)
T ss_pred cccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccc-hhHHHhcCcccc
Confidence 9999999999999999999999999999997 89999999999 6788999999999999999987 588899999999
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC--CcccEEEEEEcCCCCcEEEEEeccCCCeEEEEEC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR--HQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNV 498 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~ 498 (609)
|+...|.+||.++++++.||+|++|+..+. +++.++.. ...+|..+..-|..+.-++++. ..++|+|-++
T Consensus 351 vn~a~ft~dG~~iisaSsDgtvkvW~~Ktt------eC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN--rsntv~imn~ 422 (508)
T KOG0275|consen 351 VNEATFTDDGHHIISASSDGTVKVWHGKTT------ECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN--RSNTVYIMNM 422 (508)
T ss_pred ccceEEcCCCCeEEEecCCccEEEecCcch------hhhhhccCCCCcccceeEEEcCCCCceEEEEc--CCCeEEEEec
Confidence 999999999999999999999999999988 55555543 4567888888887776666663 7899999998
Q ss_pred CCCceeEEEcC----CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEEC
Q psy4876 499 SSGACLDSIDT----KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGA 574 (609)
Q Consensus 499 ~t~~~~~~~~~----~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~ 574 (609)
. |+.++++.. ++...+.+.+|.|.+++++. +|+.++.|.+.+|..-..+.-|+..|..++-+|..+.|++-+.
T Consensus 423 q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcig--ED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsE 499 (508)
T KOG0275|consen 423 Q-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIG--EDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSE 499 (508)
T ss_pred c-ceEEeeeccCCccCCceEEEEecCCCcEEEEEc--cCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcc
Confidence 5 778888853 34677888999999999864 8999999999999999999999999999999999999999999
Q ss_pred CCCEEEEE
Q psy4876 575 DETLRLWK 582 (609)
Q Consensus 575 Dg~I~iWd 582 (609)
||.+++|.
T Consensus 500 DgllKLWk 507 (508)
T KOG0275|consen 500 DGLLKLWK 507 (508)
T ss_pred cchhhhcC
Confidence 99999995
No 52
>KOG0645|consensus
Probab=99.96 E-value=1.6e-26 Score=218.02 Aligned_cols=247 Identities=26% Similarity=0.416 Sum_probs=209.6
Q ss_pred eeeeeeec-CCCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCC---eeEEEe-cCCCCceEEEEe--cCCEEEEEecCC
Q psy4876 326 IDHLMDLE-GNENVCSVAWIQE-GYMLGVGTSLGTVQLWDVSAK---KKCRTM-DGHDVRVGALAW--NTYILSSGSRCG 397 (609)
Q Consensus 326 ~~~l~~~~-h~~~V~~v~~spd-g~~Lasgs~dg~I~iwd~~~~---~~~~~l-~~h~~~V~~l~~--~~~~L~sgs~dg 397 (609)
+..+..+. |.+.|..++|+|. |..||+|+.|..|+||+...+ .+...+ .+|...|.+++| +|++|++++.|+
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence 34455566 8889999999998 899999999999999999853 344444 369999999999 689999999999
Q ss_pred eEEEEEcCCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcC
Q psy4876 398 NIVHHDVRSRD-HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCP 476 (609)
Q Consensus 398 ~I~iwd~~~~~-~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 476 (609)
++.||.-..++ +.+..+.+|..+|.+++|+++|++||+++.|..|.||.+..+. ...++..++.|...|+.+.|+|
T Consensus 84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd---Efec~aVL~~HtqDVK~V~WHP 160 (312)
T KOG0645|consen 84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD---EFECIAVLQEHTQDVKHVIWHP 160 (312)
T ss_pred eEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC---cEEEEeeeccccccccEEEEcC
Confidence 99999776544 5688899999999999999999999999999999999998553 3478889999999999999999
Q ss_pred CCCcEEEEEeccCCCeEEEEECC---CCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC
Q psy4876 477 WSPNVLASGGGTADRHIYFWNVS---SGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG 552 (609)
Q Consensus 477 ~~~~llasggGs~Dg~I~iwd~~---t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~ 552 (609)
.. .||+++ +.|.+|++|+-. ...++.++..+. .|.+++|++.|..|++++ +|++|+||.+.+.-. ..
T Consensus 161 t~-dlL~S~--SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~s--dD~tv~Iw~~~~~~~----~~ 231 (312)
T KOG0645|consen 161 TE-DLLFSC--SYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCS--DDGTVSIWRLYTDLS----GM 231 (312)
T ss_pred Cc-ceeEEe--ccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEec--CCcceEeeeeccCcc----hh
Confidence 65 588887 499999999876 346888898775 999999999999999955 899999999652211 24
Q ss_pred CCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCC
Q psy4876 553 HSARVLNLAMSPDETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 553 h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~ 586 (609)
|...+..+.|. ...|++++.|+.|++|.-...
T Consensus 232 ~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~ 263 (312)
T KOG0645|consen 232 HSRALYDVPWD--NGVIASGGGDDAIRLFKESDS 263 (312)
T ss_pred cccceEeeeec--ccceEeccCCCEEEEEEecCC
Confidence 77889999997 558999999999999988753
No 53
>PTZ00421 coronin; Provisional
Probab=99.96 E-value=6.6e-26 Score=245.42 Aligned_cols=290 Identities=18% Similarity=0.256 Sum_probs=217.2
Q ss_pred EEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceee-eeeec-CCCCeEEEEEcc-CCC
Q psy4876 272 LNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDH-LMDLE-GNENVCSVAWIQ-EGY 348 (609)
Q Consensus 272 v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~-h~~~V~~v~~sp-dg~ 348 (609)
+...+|...++++++.+.....|+...+. .++-.. +.++... ...+. |.+.|.+++|+| +++
T Consensus 25 ~~~~~~d~~~~~~~n~~~~a~~w~~~gg~---~v~~~~------------~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~ 89 (493)
T PTZ00421 25 PSTALWDCSNTIACNDRFIAVPWQQLGST---AVLKHT------------DYGKLASNPPILLGQEGPIIDVAFNPFDPQ 89 (493)
T ss_pred cccccCCCCCcEeECCceEEEEEecCCce---EEeecc------------ccccCCCCCceEeCCCCCEEEEEEcCCCCC
Confidence 33445655568888888888888765520 000000 0021111 11233 899999999999 889
Q ss_pred EEEEEeCCCeEEEEeCCCC-------eeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEEEEccCC
Q psy4876 349 MLGVGTSLGTVQLWDVSAK-------KKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHT 418 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~-------~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~ 418 (609)
+||+|+.||.|+|||+.++ ..+..+.+|...|.+++|+ +++|++|+.|+.|++||+.++ ..+..+.+|.
T Consensus 90 ~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg-~~~~~l~~h~ 168 (493)
T PTZ00421 90 KLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG-KAVEVIKCHS 168 (493)
T ss_pred EEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC-eEEEEEcCCC
Confidence 9999999999999999765 3567889999999999995 368999999999999999987 4677888999
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCccc-EEEEEEcCCCCcEEEEEe-ccCCCeEEEE
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA-VKAIAWCPWSPNVLASGG-GTADRHIYFW 496 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~-V~~l~~sp~~~~llasgg-Gs~Dg~I~iw 496 (609)
..|.+++|+|+|.+|++|+.|+.|+|||++++ ..+..+.+|.+. +..+.|++++..++++|. ++.|+.|++|
T Consensus 169 ~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg------~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklW 242 (493)
T PTZ00421 169 DQITSLEWNLDGSLLCTTSKDKKLNIIDPRDG------TIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLW 242 (493)
T ss_pred CceEEEEEECCCCEEEEecCCCEEEEEECCCC------cEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEE
Confidence 99999999999999999999999999999988 677788888765 457789998766666552 2468999999
Q ss_pred ECCCCc-eeEEEcC--CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC-CCCCEEEEEEeCCCCEEEEE
Q psy4876 497 NVSSGA-CLDSIDT--KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG-HSARVLNLAMSPDETTVLSA 572 (609)
Q Consensus 497 d~~t~~-~~~~~~~--~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~L~s~ 572 (609)
|+++.. ++..... ...+....|++++..++++ |..|+.|++||+.+++.+..+.. +..++..++|.|.-. +-.
T Consensus 243 Dlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lg-gkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~~--~dv 319 (493)
T PTZ00421 243 DTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIG-SKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKWS--LDT 319 (493)
T ss_pred eCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEE-EeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccccc--ccc
Confidence 998754 4443332 3456677899999988875 33599999999999887776543 456788999988532 222
Q ss_pred ECCCCEEEEEcCCC
Q psy4876 573 GADETLRLWKIFEK 586 (609)
Q Consensus 573 s~Dg~I~iWdl~~~ 586 (609)
..-...|+|.+...
T Consensus 320 ~~~Ei~r~~~l~~~ 333 (493)
T PTZ00421 320 RKCEIARFYALTYH 333 (493)
T ss_pred cceeeeEEEEecCC
Confidence 23345677877543
No 54
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=2.7e-26 Score=266.23 Aligned_cols=239 Identities=18% Similarity=0.333 Sum_probs=201.0
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC----e----eEEEecCCCCceEEEEec---CCEEEEEecCCeEEEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK----K----KCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHH 402 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~----~----~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iw 402 (609)
|.+.|++++|+|+|++||+|+.||.|+|||+... . ....+. +...|.+++|+ +.+|++++.||+|++|
T Consensus 482 ~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~lW 560 (793)
T PLN00181 482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQVW 560 (793)
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEEE
Confidence 7899999999999999999999999999997542 1 122333 34678999994 5799999999999999
Q ss_pred EcCCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcE
Q psy4876 403 DVRSRDHKVALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 403 d~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 481 (609)
|+.++ ..+..+.+|...|.+++|+| ++.+|++|+.|+.|++||++++ ..+..+..+ ..|.++.|++....+
T Consensus 561 d~~~~-~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~------~~~~~~~~~-~~v~~v~~~~~~g~~ 632 (793)
T PLN00181 561 DVARS-QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG------VSIGTIKTK-ANICCVQFPSESGRS 632 (793)
T ss_pred ECCCC-eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC------cEEEEEecC-CCeEEEEEeCCCCCE
Confidence 99886 57788899999999999997 7899999999999999999987 566666544 678999997655577
Q ss_pred EEEEeccCCCeEEEEECCCCc-eeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC------CceEEEEeCC
Q psy4876 482 LASGGGTADRHIYFWNVSSGA-CLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS------LVKVAELHGH 553 (609)
Q Consensus 482 lasggGs~Dg~I~iwd~~t~~-~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~------~~~~~~l~~h 553 (609)
+++|+ .|+.|++||++++. .+..+..+ ..|.++.|. ++.+++++ +.|+.|+|||+.. ...+..+.+|
T Consensus 633 latgs--~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~--s~D~~ikiWd~~~~~~~~~~~~l~~~~gh 707 (793)
T PLN00181 633 LAFGS--ADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSS--STDNTLKLWDLSMSISGINETPLHSFMGH 707 (793)
T ss_pred EEEEe--CCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEE--ECCCEEEEEeCCCCccccCCcceEEEcCC
Confidence 88874 89999999998765 45555544 589999997 67788874 4799999999974 3567889999
Q ss_pred CCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCC
Q psy4876 554 SARVLNLAMSPDETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 554 ~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~ 586 (609)
...+..++|++++.+|++|+.|+.|++|+....
T Consensus 708 ~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~ 740 (793)
T PLN00181 708 TNVKNFVGLSVSDGYIATGSETNEVFVYHKAFP 740 (793)
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCC
Confidence 999999999999999999999999999997654
No 55
>KOG0310|consensus
Probab=99.96 E-value=5.5e-27 Score=237.01 Aligned_cols=276 Identities=22% Similarity=0.314 Sum_probs=232.1
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
.|.+|+|||.. -+|++..-.|.||+..+ ... ...+. ....|+++.|..||
T Consensus 28 ~vssl~fsp~~P~d~aVt~S~rvqly~~~~-------------------------~~~--~k~~srFk~~v~s~~fR~DG 80 (487)
T KOG0310|consen 28 SVSSLCFSPKHPYDFAVTSSVRVQLYSSVT-------------------------RSV--RKTFSRFKDVVYSVDFRSDG 80 (487)
T ss_pred cceeEecCCCCCCceEEecccEEEEEecch-------------------------hhh--hhhHHhhccceeEEEeecCC
Confidence 48889999963 66777788899999876 222 22222 56889999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGL 424 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 424 (609)
++||+|...|.|+|||..+...++.+.+|+.+|..+.| ++..|++|+.|+.+++||+.+.. ....+.+|++.|.|.
T Consensus 81 ~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~-v~~~l~~htDYVR~g 159 (487)
T KOG0310|consen 81 RLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY-VQAELSGHTDYVRCG 159 (487)
T ss_pred eEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE-EEEEecCCcceeEee
Confidence 99999999999999998877788999999999999999 57899999999999999999975 466889999999999
Q ss_pred EEccC-CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc-
Q psy4876 425 KWSPD-GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA- 502 (609)
Q Consensus 425 ~~spd-g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~- 502 (609)
+|+|- +.++++|+.||.|++||++... ..+..+ .|..+|..+.+-|.| .+++++| ...|++||+.+|.
T Consensus 160 ~~~~~~~hivvtGsYDg~vrl~DtR~~~-----~~v~el-nhg~pVe~vl~lpsg-s~iasAg---Gn~vkVWDl~~G~q 229 (487)
T KOG0310|consen 160 DISPANDHIVVTGSYDGKVRLWDTRSLT-----SRVVEL-NHGCPVESVLALPSG-SLIASAG---GNSVKVWDLTTGGQ 229 (487)
T ss_pred ccccCCCeEEEecCCCceEEEEEeccCC-----ceeEEe-cCCCceeeEEEcCCC-CEEEEcC---CCeEEEEEecCCce
Confidence 99994 5589999999999999999762 345555 589999999999987 4677664 5899999999654
Q ss_pred eeEEEc-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 503 CLDSID-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 503 ~~~~~~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
.+.... ++..|+|+.+..++..|++ |+-|+.|++||+.+.+.+..+. -.++|.+|+.+||++.++.|-.||.+.+=
T Consensus 230 ll~~~~~H~KtVTcL~l~s~~~rLlS--~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 230 LLTSMFNHNKTVTCLRLASDSTRLLS--GSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred ehhhhhcccceEEEEEeecCCceEee--cccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeeee
Confidence 444444 6679999999999999999 5589999999998888888774 67899999999999999999999998877
Q ss_pred EcCCCc
Q psy4876 582 KIFEKV 587 (609)
Q Consensus 582 dl~~~~ 587 (609)
+....+
T Consensus 307 r~~~k~ 312 (487)
T KOG0310|consen 307 RREVKK 312 (487)
T ss_pred hhhccc
Confidence 544433
No 56
>KOG0643|consensus
Probab=99.95 E-value=2.4e-26 Score=216.26 Aligned_cols=281 Identities=16% Similarity=0.253 Sum_probs=235.1
Q ss_pred eeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
..++-|.++.+| +++++.|.++.||-... | +.+-++. |.+.|+|+..+.+
T Consensus 11 RplTqiKyN~eGDLlFscaKD~~~~vw~s~n-------------------------G--erlGty~GHtGavW~~Did~~ 63 (327)
T KOG0643|consen 11 RPLTQIKYNREGDLLFSCAKDSTPTVWYSLN-------------------------G--ERLGTYDGHTGAVWCCDIDWD 63 (327)
T ss_pred cccceEEecCCCcEEEEecCCCCceEEEecC-------------------------C--ceeeeecCCCceEEEEEecCC
Confidence 346668888887 77899999999998755 3 4677777 9999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEec-----CCeEEEEEcCCC------CeeEEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSR-----CGNIVHHDVRSR------DHKVAL 413 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~-----dg~I~iwd~~~~------~~~~~~ 413 (609)
.++|++|+.|.+++|||+++|+++..++ ....|..+.| ++++++.... .+.|.++|++.. +.+...
T Consensus 64 s~~liTGSAD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~k 142 (327)
T KOG0643|consen 64 SKHLITGSADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLK 142 (327)
T ss_pred cceeeeccccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEE
Confidence 9999999999999999999999999987 5678888888 4666665543 467999999843 245677
Q ss_pred EccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeE
Q psy4876 414 LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHI 493 (609)
Q Consensus 414 ~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I 493 (609)
+..+.+.++.+-|.|-+++|++|..||.|.+||++++. +.+.....|...|+.|+++++. ..++++ +.|.+-
T Consensus 143 I~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~-----~~v~s~~~h~~~Ind~q~s~d~-T~FiT~--s~Dtta 214 (327)
T KOG0643|consen 143 IPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGK-----ELVDSDEEHSSKINDLQFSRDR-TYFITG--SKDTTA 214 (327)
T ss_pred ecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCc-----eeeechhhhccccccccccCCc-ceEEec--ccCccc
Confidence 77788999999999999999999999999999999984 5666777899999999999987 566665 599999
Q ss_pred EEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEE------------EECCCCceEEEEeCCCCCEEEEE
Q psy4876 494 YFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLII------------WKYPSLVKVAELHGHSARVLNLA 561 (609)
Q Consensus 494 ~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~I------------wd~~~~~~~~~l~~h~~~V~~l~ 561 (609)
++||..+-++++++....+|.+.+++|....++.+.|-+...|.- |++-..+.+..+++|-++|++++
T Consensus 215 kl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvA 294 (327)
T KOG0643|consen 215 KLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVA 294 (327)
T ss_pred eeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeE
Confidence 999999999999999999999999999999888865433222322 22223356777899999999999
Q ss_pred EeCCCCEEEEEECCCCEEEEEcCCC
Q psy4876 562 MSPDETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 562 ~spdg~~L~s~s~Dg~I~iWdl~~~ 586 (609)
|||+|+..++|+.||.||+..+...
T Consensus 295 fhPdGksYsSGGEDG~VR~h~Fd~~ 319 (327)
T KOG0643|consen 295 FHPDGKSYSSGGEDGYVRLHHFDSN 319 (327)
T ss_pred ECCCCcccccCCCCceEEEEEeccc
Confidence 9999999999999999999876543
No 57
>KOG0288|consensus
Probab=99.95 E-value=7.4e-28 Score=238.41 Aligned_cols=285 Identities=17% Similarity=0.223 Sum_probs=240.0
Q ss_pred cCCCccccccCCccCCceeEEEEEecCC-C-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeee
Q psy4876 253 IPLTADRILDAPEIQNDYYLNLIDWSHF-N-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLM 330 (609)
Q Consensus 253 i~~~p~~il~ap~~~~~~~v~~l~wsp~-~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 330 (609)
+|.....++++| ++.|+.+.|-++ + +.++|.|..|.+|++.. .......
T Consensus 163 lpS~~~~~ld~h----~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~-------------------------~k~~~~~ 213 (459)
T KOG0288|consen 163 LPSRALFVLDAH----EGEVHDVEFLRNSDTLATGGSDRIIKLWNVLG-------------------------EKSELIS 213 (459)
T ss_pred cchhhhhhhhcc----ccccceeEEccCcchhhhcchhhhhhhhhccc-------------------------chhhhhh
Confidence 455555666766 567889999887 4 77799999999999987 5555566
Q ss_pred eec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCC
Q psy4876 331 DLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSR 407 (609)
Q Consensus 331 ~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~ 407 (609)
++. ..+.|+++.|.+++.++++++.|+.+++|++...+...++.+|...|+++.| ....+++|+.|.+|+.||+...
T Consensus 214 tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~ 293 (459)
T KOG0288|consen 214 TLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKA 293 (459)
T ss_pred hhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhh
Confidence 666 6688999999999999999999999999999999999999999999999999 2334999999999999999985
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEec
Q psy4876 408 DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGG 487 (609)
Q Consensus 408 ~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggG 487 (609)
. +..++. ..+.+..|+.+ +..+++|..|+.|++||++.. .+......+. .|+++..++++..+++++
T Consensus 294 ~-C~kt~l-~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~------~~~~sv~~gg-~vtSl~ls~~g~~lLsss-- 360 (459)
T KOG0288|consen 294 Y-CSKTVL-PGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSA------DKTRSVPLGG-RVTSLDLSMDGLELLSSS-- 360 (459)
T ss_pred h-eecccc-ccccccceEec--ceeeeecccccceEEEeccCC------ceeeEeecCc-ceeeEeeccCCeEEeeec--
Confidence 3 444333 33455666665 557899999999999999988 6667776554 899999999998888874
Q ss_pred cCCCeEEEEECCCCceeEEEcC-----CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCC--CEEEE
Q psy4876 488 TADRHIYFWNVSSGACLDSIDT-----KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSA--RVLNL 560 (609)
Q Consensus 488 s~Dg~I~iwd~~t~~~~~~~~~-----~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~--~V~~l 560 (609)
.|.++.+.|+++.+....+.. .+.++.+.|||++.|+++ |+.||.|+||++.++++...+..... .|+++
T Consensus 361 -RDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaA--GS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~ 437 (459)
T KOG0288|consen 361 -RDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAA--GSADGSVYIWSVFTGKLEKVLSLSTSNAAITSL 437 (459)
T ss_pred -CCCceeeeecccccEEEEeeccccccccccceeEECCCCceeee--ccCCCcEEEEEccCceEEEEeccCCCCcceEEE
Confidence 899999999999998888753 347899999999999999 77999999999999999888866444 59999
Q ss_pred EEeCCCCEEEEEECCCCEEEEE
Q psy4876 561 AMSPDETTVLSAGADETLRLWK 582 (609)
Q Consensus 561 ~~spdg~~L~s~s~Dg~I~iWd 582 (609)
+|+|.|..|++++.++.+.+|.
T Consensus 438 ~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 438 SWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred EEcCCCchhhcccCCcceEecC
Confidence 9999999999999999999994
No 58
>KOG0973|consensus
Probab=99.95 E-value=1.3e-26 Score=254.13 Aligned_cols=297 Identities=20% Similarity=0.327 Sum_probs=235.9
Q ss_pred CceeEEEEEecCCC--eEEEE--cCCeEEEEeCCCCCCCceEEecCCcccccccccccccc-ceeeeeeec-CCCCeEEE
Q psy4876 268 NDYYLNLIDWSHFN--VLAVA--LGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNR-AIDHLMDLE-GNENVCSV 341 (609)
Q Consensus 268 ~~~~v~~l~wsp~~--lla~s--~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~-h~~~V~~v 341 (609)
++..|.+++.+|++ +.++| .|+.++||+.+.- .......+. -...++++. |.+.|.|+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~v----------------l~~~~~~~~~l~k~l~~m~~h~~sv~CV 75 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPV----------------LDEKEEKNENLPKHLCTMDDHDGSVNCV 75 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccc----------------cchhhhhhcccchhheeeccccCceeEE
Confidence 35558899999998 55577 7889999998751 110000001 235666777 99999999
Q ss_pred EEccCCCEEEEEeCCCeEEEEeCCC------------------CeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEE
Q psy4876 342 AWIQEGYMLGVGTSLGTVQLWDVSA------------------KKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVH 401 (609)
Q Consensus 342 ~~spdg~~Lasgs~dg~I~iwd~~~------------------~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~i 401 (609)
.|++||.+||+|++|+.|.||+... .+.+..+.+|...|..++| ++.+|++++.|++|.+
T Consensus 76 R~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsVii 155 (942)
T KOG0973|consen 76 RFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVII 155 (942)
T ss_pred EECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEE
Confidence 9999999999999999999998772 1367788999999999999 4899999999999999
Q ss_pred EEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCC------cccEEEEEEc
Q psy4876 402 HDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRH------QAAVKAIAWC 475 (609)
Q Consensus 402 wd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h------~~~V~~l~~s 475 (609)
|+..+. ..+..+.+|.+.|-++.|.|-|+|||+-+.|++|+||++..- ...+.+.++ ...+..+.|+
T Consensus 156 wn~~tF-~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw------~i~k~It~pf~~~~~~T~f~RlSWS 228 (942)
T KOG0973|consen 156 WNAKTF-ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDW------GIEKSITKPFEESPLTTFFLRLSWS 228 (942)
T ss_pred Eccccc-eeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccc------eeeEeeccchhhCCCcceeeecccC
Confidence 999998 789999999999999999999999999999999999997654 333444332 3457899999
Q ss_pred CCCCcEEEEEecc--CCCeEEEEECCCCceeEEEcCC-CCeEEEEEcCC---------------CCeEEEEEecCCCeEE
Q psy4876 476 PWSPNVLASGGGT--ADRHIYFWNVSSGACLDSIDTK-SQVCALLWNSD---------------YKELVSAHGFAQNQLI 537 (609)
Q Consensus 476 p~~~~llasggGs--~Dg~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~---------------g~~l~~~sG~~dg~I~ 537 (609)
|||.+|.+.- +. .-.++.|.+-.+.+.-..+-+| .++..+.|+|. -.|.++++|+.|++|.
T Consensus 229 PDG~~las~n-A~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlS 307 (942)
T KOG0973|consen 229 PDGHHLASPN-AVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLS 307 (942)
T ss_pred CCcCeecchh-hccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEE
Confidence 9996554432 11 2356888888777766666544 58999999872 1234666788999999
Q ss_pred EEECCCCceEEEEeC-CCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 538 IWKYPSLVKVAELHG-HSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 538 Iwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
||.....+++..... ....|.+++|+|||-.|+.++.||+|.+..+++.+.
T Consensus 308 VW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~El 359 (942)
T KOG0973|consen 308 VWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKEL 359 (942)
T ss_pred EEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHHh
Confidence 999988888766532 356899999999999999999999999999987654
No 59
>KOG0277|consensus
Probab=99.95 E-value=2.6e-27 Score=221.31 Aligned_cols=236 Identities=25% Similarity=0.452 Sum_probs=202.1
Q ss_pred eEEEEEecCCC---eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 271 YLNLIDWSHFN---VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 271 ~v~~l~wsp~~---lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
.+..++|+++. +++++.||+++|||... ...++..++ |...|.++.|++.
T Consensus 62 ~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~--------------------------~s~Pi~~~kEH~~EV~Svdwn~~ 115 (311)
T KOG0277|consen 62 GLFDVAWSENHENQVIAASGDGSLRLFDLTM--------------------------PSKPIHKFKEHKREVYSVDWNTV 115 (311)
T ss_pred ceeEeeecCCCcceEEEEecCceEEEeccCC--------------------------CCcchhHHHhhhhheEEeccccc
Confidence 36779999863 88899999999999654 234566666 9999999999985
Q ss_pred -CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeE
Q psy4876 347 -GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVC 422 (609)
Q Consensus 347 -g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 422 (609)
+..+++++.||+|++|+...++.++++.+|...|....|+ ++++++++.||.+++||++..+..+. +..|..+|.
T Consensus 116 ~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil 194 (311)
T KOG0277|consen 116 RRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEIL 194 (311)
T ss_pred cceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEeccceeE
Confidence 4778888999999999999999999999999999999994 68999999999999999998864444 888999999
Q ss_pred EEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC
Q psy4876 423 GLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG 501 (609)
Q Consensus 423 ~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~ 501 (609)
++.|+. +.+.+++|+.|+.|++||+++.. .++..+.+|.-+|..+.|+|....+|+++ +.|-+++|||...+
T Consensus 195 ~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-----~pl~eL~gh~~AVRkvk~Sph~~~lLaSa--sYDmT~riw~~~~~ 267 (311)
T KOG0277|consen 195 CCDWSKYNHNVLATGGVDNLVRGWDIRNLR-----TPLFELNGHGLAVRKVKFSPHHASLLASA--SYDMTVRIWDPERQ 267 (311)
T ss_pred eecccccCCcEEEecCCCceEEEEehhhcc-----ccceeecCCceEEEEEecCcchhhHhhhc--cccceEEecccccc
Confidence 999998 77789999999999999999875 68899999999999999999999999998 59999999999844
Q ss_pred -ceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 502 -ACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 502 -~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
.++.+.++|. -++.+.|++...-.++.+| -|+.++||+.
T Consensus 268 ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~g-WDe~l~Vw~p 308 (311)
T KOG0277|consen 268 DSAIETVDHHTEFVCGLDWSLFDPGQVASTG-WDELLYVWNP 308 (311)
T ss_pred hhhhhhhhccceEEeccccccccCceeeecc-cccceeeecc
Confidence 4555666665 6899999987544444444 7999999983
No 60
>KOG0283|consensus
Probab=99.95 E-value=5.6e-27 Score=251.31 Aligned_cols=241 Identities=17% Similarity=0.303 Sum_probs=198.9
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC--------------------------------C--------------
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSA--------------------------------K-------------- 367 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~--------------------------------~-------------- 367 (609)
|.+.|.++.|++||+|||+|+.||.|+||.+.. .
T Consensus 266 h~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s 345 (712)
T KOG0283|consen 266 HKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQS 345 (712)
T ss_pred cCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCC
Confidence 899999999999999999999999999998754 0
Q ss_pred --------------eeEEEecCCCCceEEEEec-CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEcc-CCC
Q psy4876 368 --------------KKCRTMDGHDVRVGALAWN-TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP-DGR 431 (609)
Q Consensus 368 --------------~~~~~l~~h~~~V~~l~~~-~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~ 431 (609)
+.++.+.||.+.|..|.|+ .++|++++.|.+|++|++... .++..+. |...|+||+|+| |.+
T Consensus 346 ~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~-~CL~~F~-HndfVTcVaFnPvDDr 423 (712)
T KOG0283|consen 346 PCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRK-ECLKVFS-HNDFVTCVAFNPVDDR 423 (712)
T ss_pred ccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCc-ceeeEEe-cCCeeEEEEecccCCC
Confidence 0123456899999999995 789999999999999999975 4777765 999999999999 889
Q ss_pred EEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc---
Q psy4876 432 YLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID--- 508 (609)
Q Consensus 432 ~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~--- 508 (609)
||++|+-||.|+||++... .+..+..-..-|++++|.|+|+. .++| +.+|.+++|++...+....+.
T Consensus 424 yFiSGSLD~KvRiWsI~d~-------~Vv~W~Dl~~lITAvcy~PdGk~-avIG--t~~G~C~fY~t~~lk~~~~~~I~~ 493 (712)
T KOG0283|consen 424 YFISGSLDGKVRLWSISDK-------KVVDWNDLRDLITAVCYSPDGKG-AVIG--TFNGYCRFYDTEGLKLVSDFHIRL 493 (712)
T ss_pred cEeecccccceEEeecCcC-------eeEeehhhhhhheeEEeccCCce-EEEE--EeccEEEEEEccCCeEEEeeeEee
Confidence 9999999999999999865 34444445578999999999864 4444 699999999999877665543
Q ss_pred ------CCCCeEEEEEcCCCC-eEEEEEecCCCeEEEEECCCCceEEEEeCCCC--CEEEEEEeCCCCEEEEEECCCCEE
Q psy4876 509 ------TKSQVCALLWNSDYK-ELVSAHGFAQNQLIIWKYPSLVKVAELHGHSA--RVLNLAMSPDETTVLSAGADETLR 579 (609)
Q Consensus 509 ------~~~~v~sl~~s~~g~-~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~--~V~~l~~spdg~~L~s~s~Dg~I~ 579 (609)
.+..|+.+.|.|... .+++++ .|..|+|||.++...+..|+|+.. .-....|+.||++|++++.|..|+
T Consensus 494 ~~~Kk~~~~rITG~Q~~p~~~~~vLVTS--nDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VY 571 (712)
T KOG0283|consen 494 HNKKKKQGKRITGLQFFPGDPDEVLVTS--NDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVY 571 (712)
T ss_pred ccCccccCceeeeeEecCCCCCeEEEec--CCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEE
Confidence 123799999997655 355533 799999999988888888887542 345678999999999999999999
Q ss_pred EEEcCCCcc
Q psy4876 580 LWKIFEKVK 588 (609)
Q Consensus 580 iWdl~~~~~ 588 (609)
||++.....
T Consensus 572 iW~~~~~~~ 580 (712)
T KOG0283|consen 572 IWKNDSFNS 580 (712)
T ss_pred EEeCCCCcc
Confidence 999966554
No 61
>KOG0313|consensus
Probab=99.95 E-value=1.9e-26 Score=226.40 Aligned_cols=252 Identities=23% Similarity=0.378 Sum_probs=213.9
Q ss_pred eeeeeecCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe---c--CCEEEEEecCCeEEE
Q psy4876 327 DHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW---N--TYILSSGSRCGNIVH 401 (609)
Q Consensus 327 ~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~---~--~~~L~sgs~dg~I~i 401 (609)
..+..+.|++.|.+|... +++|++|+.||.++|||.. |+...++.+|.++|.+++| + ...|++++.|.++++
T Consensus 97 ~pl~~~~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~L 173 (423)
T KOG0313|consen 97 KPLQCFLHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRL 173 (423)
T ss_pred Cccccccchhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEE
Confidence 444555588999999887 7899999999999999975 7999999999999999999 2 357999999999999
Q ss_pred EEcCCCCee---EEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCC-------------------CCCCccce
Q psy4876 402 HDVRSRDHK---VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQ-------------------HTFSTQPI 459 (609)
Q Consensus 402 wd~~~~~~~---~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~-------------------~~~~~~~~ 459 (609)
|.+..+... +..-.+|...|.++...++|..+++|+.|.+|.||+..+.. ......++
T Consensus 174 w~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~ 253 (423)
T KOG0313|consen 174 WKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPL 253 (423)
T ss_pred EEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCce
Confidence 999876532 23344999999999999999999999999999999932211 01123578
Q ss_pred EeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEE
Q psy4876 460 HSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIW 539 (609)
Q Consensus 460 ~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iw 539 (609)
..+.+|..+|.++.|++. ..+.++ +.|.+|+.||+.++.+...+.+...+.++.+++..++|++ |+.|..|++|
T Consensus 254 vtl~GHt~~Vs~V~w~d~--~v~yS~--SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~--gssdr~irl~ 327 (423)
T KOG0313|consen 254 VTLEGHTEPVSSVVWSDA--TVIYSV--SWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLAS--GSSDRHIRLW 327 (423)
T ss_pred EEecccccceeeEEEcCC--CceEee--cccceEEEEEeecccceeeeecCcceeEeecccccceeee--cCCCCceeec
Confidence 889999999999999993 466665 4999999999999999999999999999999999999988 6689999999
Q ss_pred ECCCCc---eEEEEeCCCCCEEEEEEeCCC-CEEEEEECCCCEEEEEcCCCc
Q psy4876 540 KYPSLV---KVAELHGHSARVLNLAMSPDE-TTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 540 d~~~~~---~~~~l~~h~~~V~~l~~spdg-~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
|.+++. ....|.+|.+.|..+.|+|.. ..|++|+.|+++++||+....
T Consensus 328 DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k 379 (423)
T KOG0313|consen 328 DPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK 379 (423)
T ss_pred CCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC
Confidence 987652 456788999999999999954 578899999999999998866
No 62
>KOG0294|consensus
Probab=99.95 E-value=5.4e-26 Score=218.46 Aligned_cols=276 Identities=20% Similarity=0.344 Sum_probs=224.6
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEE
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQ 360 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~ 360 (609)
+++|++...|.-+++.-.. ......+. ..+..++.+. |.+.|++|+.+ |.++|+|+.|-+|+
T Consensus 4 iIvGtYE~~i~Gf~l~~~~------------~~~~~s~~---~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~ 66 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEP------------KGCTDSVK---PTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIH 66 (362)
T ss_pred EEEeeeeeEEEEEEeccCc------------cccccccc---eeeeccccccccccceeEEEec--ceeEeccCCCCcEE
Confidence 6778888888877776421 00011111 2345567777 99999999985 88999999999999
Q ss_pred EEeCCCCeeEEEecCCCCceEEEEecC----CEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEE
Q psy4876 361 LWDVSAKKKCRTMDGHDVRVGALAWNT----YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASG 436 (609)
Q Consensus 361 iwd~~~~~~~~~l~~h~~~V~~l~~~~----~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasg 436 (609)
|||+.+...+..+-.|.+.|+++.|.+ ..|++|+.||.|.+|+...- ..+..+++|.+.|+.|+.+|.|++.++.
T Consensus 67 IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W-~~~~slK~H~~~Vt~lsiHPS~KLALsV 145 (362)
T KOG0294|consen 67 IYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSW-ELLKSLKAHKGQVTDLSIHPSGKLALSV 145 (362)
T ss_pred EEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCe-EEeeeecccccccceeEecCCCceEEEE
Confidence 999999999999999999999999943 37999999999999999986 6899999999999999999999999999
Q ss_pred eCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEE
Q psy4876 437 GNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCAL 516 (609)
Q Consensus 437 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl 516 (609)
+.|+.++.||+-.|.. ..+..+. +. -+.+.|+|.|.++++.+ ...|-+|.+.+......+.....+.++
T Consensus 146 g~D~~lr~WNLV~Gr~----a~v~~L~-~~--at~v~w~~~Gd~F~v~~----~~~i~i~q~d~A~v~~~i~~~~r~l~~ 214 (362)
T KOG0294|consen 146 GGDQVLRTWNLVRGRV----AFVLNLK-NK--ATLVSWSPQGDHFVVSG----RNKIDIYQLDNASVFREIENPKRILCA 214 (362)
T ss_pred cCCceeeeehhhcCcc----ceeeccC-Cc--ceeeEEcCCCCEEEEEe----ccEEEEEecccHhHhhhhhccccceee
Confidence 9999999999998843 2222222 22 24499999998777764 688999999988877777766667777
Q ss_pred EEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEE--eCCCCEEEEEECCCCEEEEEcCCCccc
Q psy4876 517 LWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAM--SPDETTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 517 ~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~--spdg~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
.|... .+|++ |.+++.|.+||..+..++..+.+|..+|-++.+ .|++.+|+|++.||.|+|||+....+.
T Consensus 215 ~~l~~-~~L~v--G~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~ 286 (362)
T KOG0294|consen 215 TFLDG-SELLV--GGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKK 286 (362)
T ss_pred eecCC-ceEEE--ecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccccC
Confidence 77554 45555 558999999999999999999999999999984 467889999999999999999877443
No 63
>KOG0296|consensus
Probab=99.95 E-value=5.8e-26 Score=222.06 Aligned_cols=247 Identities=19% Similarity=0.324 Sum_probs=206.4
Q ss_pred eeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcC
Q psy4876 329 LMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVR 405 (609)
Q Consensus 329 l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~ 405 (609)
+..+. |.+.|.+++.+|+.+++|+|+.|..-.||++.++.....+.+|...|+++.| ++.+|++|+.+|.|.||+..
T Consensus 57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~s 136 (399)
T KOG0296|consen 57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS 136 (399)
T ss_pred eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcc
Confidence 44555 9999999999999999999999999999999999999999999999999999 68999999999999999999
Q ss_pred CCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEE
Q psy4876 406 SRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASG 485 (609)
Q Consensus 406 ~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasg 485 (609)
++. ....+...-..|.-+.|+|.+..|+.|+.||.|.+|.+.++ ...+.+.+|..++++=.|.|+|++++. +
T Consensus 137 tg~-~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~------~~~kv~~Gh~~~ct~G~f~pdGKr~~t-g 208 (399)
T KOG0296|consen 137 TGG-EQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ------ALCKVMSGHNSPCTCGEFIPDGKRILT-G 208 (399)
T ss_pred cCc-eEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCc------ceeeEecCCCCCcccccccCCCceEEE-E
Confidence 985 55555556678889999999999999999999999999986 577889999999999999999975554 4
Q ss_pred eccCCCeEEEEECCCCceeEEEcCC--CCeEE------------------------------------------------
Q psy4876 486 GGTADRHIYFWNVSSGACLDSIDTK--SQVCA------------------------------------------------ 515 (609)
Q Consensus 486 gGs~Dg~I~iwd~~t~~~~~~~~~~--~~v~s------------------------------------------------ 515 (609)
..||+|++||..++.++..+... ....+
T Consensus 209 --y~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~ 286 (399)
T KOG0296|consen 209 --YDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELD 286 (399)
T ss_pred --ecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhh
Confidence 58999999999999887766410 00000
Q ss_pred -----EEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccc
Q psy4876 516 -----LLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 516 -----l~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
+.|+..-. +.++|+-||+|.|||+...+....+ .|...|+.+.|-+ ..+|++++.||.|+.||..++...
T Consensus 287 esve~~~~ss~lp--L~A~G~vdG~i~iyD~a~~~~R~~c-~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~ 361 (399)
T KOG0296|consen 287 ESVESIPSSSKLP--LAACGSVDGTIAIYDLAASTLRHIC-EHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLK 361 (399)
T ss_pred hhhhhcccccccc--hhhcccccceEEEEecccchhheec-cCCCceEEEEEcC-cchheeeccCceEEeeeccccceE
Confidence 11111111 2244789999999999887765554 5889999999998 789999999999999999998764
No 64
>KOG0292|consensus
Probab=99.95 E-value=9.5e-27 Score=248.20 Aligned_cols=246 Identities=19% Similarity=0.335 Sum_probs=217.5
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
....|..++|+|...+++++-.+|.|++||.+-+.++..+..|.++|..++|+ ..++++|+.|-.|+||+..+. .++
T Consensus 8 kSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r-rcl 86 (1202)
T KOG0292|consen 8 KSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR-RCL 86 (1202)
T ss_pred ccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc-eeh
Confidence 45778999999999999999999999999999999999999999999999996 579999999999999999987 688
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
.++.+|-+.|..+.|++.-.+|++++.|.+|+||+..+. .++..+++|...|.|..|+|.. .+++++ |-|.
T Consensus 87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr------~~iavltGHnHYVMcAqFhptE-DlIVSa--SLDQ 157 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSR------KCIAVLTGHNHYVMCAQFHPTE-DLIVSA--SLDQ 157 (1202)
T ss_pred hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCC------ceEEEEecCceEEEeeccCCcc-ceEEEe--cccc
Confidence 999999999999999999999999999999999999998 8999999999999999999965 577777 5999
Q ss_pred eEEEEECCCCc---------------------------e--eEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 492 HIYFWNVSSGA---------------------------C--LDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 492 ~I~iwd~~t~~---------------------------~--~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
+|++||+..-+ . ...+++|. .|..++|+|.-..+++ |.+|..|++|.+
T Consensus 158 TVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVS--G~DDRqVKlWrm 235 (1202)
T KOG0292|consen 158 TVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVS--GADDRQVKLWRM 235 (1202)
T ss_pred eEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEe--cCCcceeeEEEe
Confidence 99999985210 0 12234444 7999999999999988 669999999998
Q ss_pred CCCc--eEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchh
Q psy4876 542 PSLV--KVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 542 ~~~~--~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
...+ .+.+..+|.+.|.++-|+|...+|++.|.|++|||||+......+.
T Consensus 236 netKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~t 287 (1202)
T KOG0292|consen 236 NETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQT 287 (1202)
T ss_pred ccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceee
Confidence 6543 3456789999999999999999999999999999999987665443
No 65
>KOG0772|consensus
Probab=99.95 E-value=5.5e-26 Score=230.33 Aligned_cols=297 Identities=15% Similarity=0.241 Sum_probs=229.4
Q ss_pred ccCCCccccccCCccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeee
Q psy4876 252 YIPLTADRILDAPEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHL 329 (609)
Q Consensus 252 ~i~~~p~~il~ap~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 329 (609)
.||-..+..+... .-.|..+++.|.| +++|+.|.+|++||++.-. ......
T Consensus 154 ~IP~shEi~l~hg----tk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMd-----------------------as~~~f 206 (641)
T KOG0772|consen 154 LIPGSHEIQLKHG----TKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMD-----------------------ASMRSF 206 (641)
T ss_pred cCCccceEeccCC----ceEEEEeeecCCCceeeeccccceEEEEeccccc-----------------------ccchhh
Confidence 3555544444332 3458899999987 9999999999999998621 122223
Q ss_pred eeec--CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEE------------ecCCCCceEEEEec---CCEEEE
Q psy4876 330 MDLE--GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRT------------MDGHDVRVGALAWN---TYILSS 392 (609)
Q Consensus 330 ~~~~--h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~------------l~~h~~~V~~l~~~---~~~L~s 392 (609)
..+. ....|.+++|++.|..|++.+.....+|+|-.....+.. .+||...++|.+|+ ...+++
T Consensus 207 r~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT 286 (641)
T KOG0772|consen 207 RQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLT 286 (641)
T ss_pred hccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEE
Confidence 3333 567899999999998888888888999999765443332 35799999999995 478999
Q ss_pred EecCCeEEEEEcCCCCeeEEEEc-----cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcc
Q psy4876 393 GSRCGNIVHHDVRSRDHKVALLQ-----NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQA 467 (609)
Q Consensus 393 gs~dg~I~iwd~~~~~~~~~~~~-----~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~ 467 (609)
++.||++++||+.........+. +..-.++.++|++||++||+|+.||.|.+|+...... ....+.-..|..
T Consensus 287 ~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v---~p~~~vk~AH~~ 363 (641)
T KOG0772|consen 287 CSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTV---RPVMKVKDAHLP 363 (641)
T ss_pred ecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCccc---ccceEeeeccCC
Confidence 99999999999987654444443 3345789999999999999999999999999865422 122233345766
Q ss_pred --cEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC-ceeEEEc---CCCCeEEEEEcCCCCeEEEEEe----cCCCeEE
Q psy4876 468 --AVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG-ACLDSID---TKSQVCALLWNSDYKELVSAHG----FAQNQLI 537 (609)
Q Consensus 468 --~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~-~~~~~~~---~~~~v~sl~~s~~g~~l~~~sG----~~dg~I~ 537 (609)
.|+||.|+++|+.|+.-| .|+++++||++.. +++.+.. ....-+.++|+|+.++|++++. ...|.++
T Consensus 364 g~~Itsi~FS~dg~~LlSRg---~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~ 440 (641)
T KOG0772|consen 364 GQDITSISFSYDGNYLLSRG---FDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLF 440 (641)
T ss_pred CCceeEEEeccccchhhhcc---CCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEE
Confidence 899999999997666544 7999999999954 4555443 2346788999999999998642 3457899
Q ss_pred EEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 538 IWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 538 Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
+||..+...+..+.-....|..+.|||.=+.|+.++.||+++||
T Consensus 441 f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 441 FFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred EEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 99999999999987778889999999998899999999999886
No 66
>KOG1446|consensus
Probab=99.95 E-value=1.2e-24 Score=210.15 Aligned_cols=275 Identities=19% Similarity=0.254 Sum_probs=224.7
Q ss_pred eeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
-.|++|+|+.+| +++++.|.+|+|||..+ +.. +.++. +.-.|..+.|...
T Consensus 15 ~~i~sl~fs~~G~~litss~dDsl~LYd~~~-------------------------g~~--~~ti~skkyG~~~~~Fth~ 67 (311)
T KOG1446|consen 15 GKINSLDFSDDGLLLITSSEDDSLRLYDSLS-------------------------GKQ--VKTINSKKYGVDLACFTHH 67 (311)
T ss_pred CceeEEEecCCCCEEEEecCCCeEEEEEcCC-------------------------Cce--eeEeecccccccEEEEecC
Confidence 458999999997 66678888999999988 443 33444 5567788888877
Q ss_pred CCEEEEEeC--CCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeE
Q psy4876 347 GYMLGVGTS--LGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVC 422 (609)
Q Consensus 347 g~~Lasgs~--dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 422 (609)
...++.++. |.+|+..++.+.+.++.+.||...|..|+.+ ++.+++++.|++|++||++... +...+.....+
T Consensus 68 ~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~-cqg~l~~~~~p-- 144 (311)
T KOG1446|consen 68 SNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKK-CQGLLNLSGRP-- 144 (311)
T ss_pred CceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCC-CceEEecCCCc--
Confidence 777776766 7899999999999999999999999999995 5899999999999999999763 44444433333
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec---CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC
Q psy4876 423 GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS---RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS 499 (609)
Q Consensus 423 ~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~ 499 (609)
.++|.|+|-++|++...+.|++||++.-.. .|..++. ......+.|.|+|+|+.+|++. ..+.+++.|.-
T Consensus 145 i~AfDp~GLifA~~~~~~~IkLyD~Rs~dk----gPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT---~~s~~~~lDAf 217 (311)
T KOG1446|consen 145 IAAFDPEGLIFALANGSELIKLYDLRSFDK----GPFTTFSITDNDEAEWTDLEFSPDGKSILLST---NASFIYLLDAF 217 (311)
T ss_pred ceeECCCCcEEEEecCCCeEEEEEecccCC----CCceeEccCCCCccceeeeEEcCCCCEEEEEe---CCCcEEEEEcc
Confidence 468999999999999888999999997532 3444443 3366789999999999998874 68999999999
Q ss_pred CCceeEEEcCCC----CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC-CCCCEEEEEEeCCCCEEEEEEC
Q psy4876 500 SGACLDSIDTKS----QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG-HSARVLNLAMSPDETTVLSAGA 574 (609)
Q Consensus 500 t~~~~~~~~~~~----~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~L~s~s~ 574 (609)
+|..+.++..+. -..+.+|.||++++++ |..||.|++|++.++.++..+.+ +.+.+.++.|+|.-..++++
T Consensus 218 ~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~--gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa-- 293 (311)
T KOG1446|consen 218 DGTVKSTFSGYPNAGNLPLSATFTPDSKFVLS--GSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSA-- 293 (311)
T ss_pred CCcEeeeEeeccCCCCcceeEEECCCCcEEEE--ecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeec--
Confidence 999988887543 2358899999999999 66899999999999999999998 78999999999986666665
Q ss_pred CCCEEEEEcCC
Q psy4876 575 DETLRLWKIFE 585 (609)
Q Consensus 575 Dg~I~iWdl~~ 585 (609)
+..+.+|=...
T Consensus 294 ~s~l~fw~p~~ 304 (311)
T KOG1446|consen 294 SSNLVFWLPDE 304 (311)
T ss_pred CceEEEEeccc
Confidence 55788887654
No 67
>KOG0310|consensus
Probab=99.95 E-value=2.1e-26 Score=232.83 Aligned_cols=241 Identities=21% Similarity=0.333 Sum_probs=209.9
Q ss_pred CCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCee
Q psy4876 334 GNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHK 410 (609)
Q Consensus 334 h~~~V~~v~~spdg-~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~ 410 (609)
....|++++|+|.. .-+|+.++ -.+.||+..+....+.+......|.++.| ||.+|++|+..|.|+++|..+. ..
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r-~i 102 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSR-VI 102 (487)
T ss_pred ccCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccH-HH
Confidence 45789999999976 33444444 57999999988888888888899999999 7999999999999999996664 47
Q ss_pred EEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 411 VALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 411 ~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
+..+.+|+.+|..+.|+| ++..|++|+.|+.+++||+.+. .....+.+|+..|.|.+|+|....++++|| .
T Consensus 103 LR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a------~v~~~l~~htDYVR~g~~~~~~~hivvtGs--Y 174 (487)
T KOG0310|consen 103 LRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA------YVQAELSGHTDYVRCGDISPANDHIVVTGS--Y 174 (487)
T ss_pred HHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc------EEEEEecCCcceeEeeccccCCCeEEEecC--C
Confidence 788999999999999999 5667889999999999999987 446688999999999999999989999985 9
Q ss_pred CCeEEEEECCCC-ceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceE-EEEeCCCCCEEEEEEeCCCC
Q psy4876 490 DRHIYFWNVSSG-ACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKV-AELHGHSARVLNLAMSPDET 567 (609)
Q Consensus 490 Dg~I~iwd~~t~-~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~-~~l~~h~~~V~~l~~spdg~ 567 (609)
||.|++||++.. ..+.+++++.+|.++.+-|.|..+++++ .+.|+|||+-+|..+ ..+..|...|+|+++..++.
T Consensus 175 Dg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAg---Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~ 251 (487)
T KOG0310|consen 175 DGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAG---GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDST 251 (487)
T ss_pred CceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcC---CCeEEEEEecCCceehhhhhcccceEEEEEeecCCc
Confidence 999999999976 7889999999999999999999999985 489999999866554 44445999999999999999
Q ss_pred EEEEEECCCCEEEEEcCCCc
Q psy4876 568 TVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 568 ~L~s~s~Dg~I~iWdl~~~~ 587 (609)
.|++|+-|+.|++||+.+-+
T Consensus 252 rLlS~sLD~~VKVfd~t~~K 271 (487)
T KOG0310|consen 252 RLLSGSLDRHVKVFDTTNYK 271 (487)
T ss_pred eEeecccccceEEEEccceE
Confidence 99999999999999965443
No 68
>KOG0306|consensus
Probab=99.95 E-value=2.9e-25 Score=233.83 Aligned_cols=279 Identities=21% Similarity=0.327 Sum_probs=239.7
Q ss_pred eeEEEEEecCCC-eEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHFN-VLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~~-lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
+.|+|+.-+++. ++| |-.||.|+||+..+ + ..+.++. |...|+++.|...
T Consensus 66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s-------------------------~--~~~~tfngHK~AVt~l~fd~~ 118 (888)
T KOG0306|consen 66 AEVTCLRSSDDILLLAVGYADGSVQIFSLES-------------------------E--EILITFNGHKAAVTTLKFDKI 118 (888)
T ss_pred ceEEEeeccCCcceEEEEecCceEEeeccCC-------------------------C--ceeeeecccccceEEEEEccc
Confidence 467888888886 445 55699999999986 4 4566676 9999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-c-CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-N-TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGL 424 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~-~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 424 (609)
|..||+|+.|+.|.|||+-...-+..+.+|...|+..-| + ..++++.+.|+.|++||+.+. ++..+.-.|..+|.++
T Consensus 119 G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tq-hCf~Thvd~r~Eiw~l 197 (888)
T KOG0306|consen 119 GTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQ-HCFETHVDHRGEIWAL 197 (888)
T ss_pred CceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccc-eeeeEEecccceEEEE
Confidence 999999999999999999888888999999999999999 3 689999999999999999996 7888889999999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCCC-----------------------------------------------------
Q psy4876 425 KWSPDGRYLASGGNDNLLNIWSGVPGQ----------------------------------------------------- 451 (609)
Q Consensus 425 ~~spdg~~lasgs~Dg~I~iwd~~~~~----------------------------------------------------- 451 (609)
++++ +.+++++.|+.+++|++....
T Consensus 198 ~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s 275 (888)
T KOG0306|consen 198 VLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRS 275 (888)
T ss_pred EEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecC
Confidence 9987 789999999999999981000
Q ss_pred -------------------C------------------------------------CCCc-------------------c
Q psy4876 452 -------------------H------------------------------------TFST-------------------Q 457 (609)
Q Consensus 452 -------------------~------------------------------------~~~~-------------------~ 457 (609)
. .... .
T Consensus 276 ~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~ 355 (888)
T KOG0306|consen 276 KEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSG 355 (888)
T ss_pred HHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCC
Confidence 0 0000 0
Q ss_pred c---------eEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEE
Q psy4876 458 P---------IHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSA 528 (609)
Q Consensus 458 ~---------~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~ 528 (609)
. ...+.+|...|.+++++.+. .++++| ..+.|++|+..+.+|+.++... .+.+..|.|.++++++
T Consensus 356 ~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~-~~~~Sg---a~~SikiWn~~t~kciRTi~~~-y~l~~~Fvpgd~~Iv~- 429 (888)
T KOG0306|consen 356 KTSPEADRTSNIEIGGHRSDVRSLCVSSDS-ILLASG---AGESIKIWNRDTLKCIRTITCG-YILASKFVPGDRYIVL- 429 (888)
T ss_pred CCCccccccceeeeccchhheeEEEeecCc-eeeeec---CCCcEEEEEccCcceeEEeccc-cEEEEEecCCCceEEE-
Confidence 0 02345788889999999875 566666 4799999999999999999877 7888999999999999
Q ss_pred EecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 529 HGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 529 sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
|...|.+.+||+.+...+.++++|.+.|+.++.+||+..+++||+|.+|++||+.-
T Consensus 430 -G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l 485 (888)
T KOG0306|consen 430 -GTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKL 485 (888)
T ss_pred -eccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEE
Confidence 66999999999999999999999999999999999999999999999999999864
No 69
>KOG0265|consensus
Probab=99.94 E-value=6.3e-26 Score=216.78 Aligned_cols=212 Identities=21% Similarity=0.378 Sum_probs=195.2
Q ss_pred EEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeC
Q psy4876 370 CRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSG 447 (609)
Q Consensus 370 ~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~ 447 (609)
+..+.+|.+.|..+.| +|.+|++|+.|..|.+|++....+....+++|++.|..+.|.+|+..+++++.|.+|+.||+
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~ 119 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDA 119 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEec
Confidence 4456799999999999 57999999999999999988766678889999999999999999999999999999999999
Q ss_pred CCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEE
Q psy4876 448 VPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVS 527 (609)
Q Consensus 448 ~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~ 527 (609)
+++ +.++.+.+|...|.++.-+..|..++.+| +.|+++++||+++..+++++....+++++.|...+..+++
T Consensus 120 ~tG------~~~rk~k~h~~~vNs~~p~rrg~~lv~Sg--sdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~s 191 (338)
T KOG0265|consen 120 ETG------KRIRKHKGHTSFVNSLDPSRRGPQLVCSG--SDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVIS 191 (338)
T ss_pred ccc------eeeehhccccceeeecCccccCCeEEEec--CCCceEEEEeecccchhhccccceeEEEEEecccccceee
Confidence 999 88999999999999999766777777775 6999999999999999999999999999999999999999
Q ss_pred EEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchh
Q psy4876 528 AHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 528 ~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
|.-|+.|++||++....+..+.||.+.|+.+..+++|.++.+-+.|.+|++||+..-.+..+
T Consensus 192 --ggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R 253 (338)
T KOG0265|consen 192 --GGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQR 253 (338)
T ss_pred --ccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCc
Confidence 56899999999999999999999999999999999999999999999999999987655443
No 70
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=1.6e-24 Score=234.70 Aligned_cols=245 Identities=16% Similarity=0.283 Sum_probs=190.7
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeE-------------EEecCCCCceEEEEec---CCEEEEEecCCeEE
Q psy4876 337 NVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKC-------------RTMDGHDVRVGALAWN---TYILSSGSRCGNIV 400 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~-------------~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~ 400 (609)
.|.....++++..+++++.+.....|+...+..+ ..+.+|.+.|.+++|+ +.+|++|+.||+|+
T Consensus 22 ~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIk 101 (493)
T PTZ00421 22 NVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIM 101 (493)
T ss_pred ccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 3444555556555555665566666665433221 2467899999999995 47999999999999
Q ss_pred EEEcCCCC------eeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEE
Q psy4876 401 HHDVRSRD------HKVALLQNHTQEVCGLKWSPDG-RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473 (609)
Q Consensus 401 iwd~~~~~------~~~~~~~~h~~~V~~l~~spdg-~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~ 473 (609)
+||+.... ..+..+.+|...|.+++|+|++ ++|++|+.|+.|+|||+.++ ..+..+..|...|.+++
T Consensus 102 IWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg------~~~~~l~~h~~~V~sla 175 (493)
T PTZ00421 102 GWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG------KAVEVIKCHSDQITSLE 175 (493)
T ss_pred EEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC------eEEEEEcCCCCceEEEE
Confidence 99997642 2466788999999999999975 69999999999999999987 67788889999999999
Q ss_pred EcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC--CeEEEEEcCCCCeEEEEEe--cCCCeEEEEECCCCce-EE
Q psy4876 474 WCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS--QVCALLWNSDYKELVSAHG--FAQNQLIIWKYPSLVK-VA 548 (609)
Q Consensus 474 ~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~--~v~sl~~s~~g~~l~~~sG--~~dg~I~Iwd~~~~~~-~~ 548 (609)
|+|++. +|+++ +.|+.|++||+++++.+..+..+. .+..+.|.+++..+++++. ..|+.|++||+++... +.
T Consensus 176 ~spdG~-lLatg--s~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~ 252 (493)
T PTZ00421 176 WNLDGS-LLCTT--SKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYS 252 (493)
T ss_pred EECCCC-EEEEe--cCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCcee
Confidence 999884 66666 389999999999999988887664 3567889999888876532 3589999999987653 33
Q ss_pred EEeCC-CCCEEEEEEeCCCCEEEEEE-CCCCEEEEEcCCCccch
Q psy4876 549 ELHGH-SARVLNLAMSPDETTVLSAG-ADETLRLWKIFEKVKSK 590 (609)
Q Consensus 549 ~l~~h-~~~V~~l~~spdg~~L~s~s-~Dg~I~iWdl~~~~~~~ 590 (609)
....+ ...+....|++++.+|++++ .|+.|++||+.++....
T Consensus 253 ~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~ 296 (493)
T PTZ00421 253 TVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTF 296 (493)
T ss_pred EeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEE
Confidence 33323 34566778999999999988 59999999998876543
No 71
>KOG0282|consensus
Probab=99.94 E-value=9.7e-27 Score=234.80 Aligned_cols=254 Identities=20% Similarity=0.315 Sum_probs=216.6
Q ss_pred eeeeec-CCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCC-CeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEE
Q psy4876 328 HLMDLE-GNENVCSVAWIQ-EGYMLGVGTSLGTVQLWDVSA-KKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHH 402 (609)
Q Consensus 328 ~l~~~~-h~~~V~~v~~sp-dg~~Lasgs~dg~I~iwd~~~-~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iw 402 (609)
.+..+. |...|+++.|.| .+.+|++|+.|+.|+||++.. +++++++.+|..+|..++| .|..|++++.|+.|++|
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlw 285 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLW 285 (503)
T ss_pred heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeee
Confidence 445566 999999999999 789999999999999999976 8999999999999999999 48899999999999999
Q ss_pred EcCCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcE
Q psy4876 403 DVRSRDHKVALLQNHTQEVCGLKWSPDG-RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 403 d~~~~~~~~~~~~~h~~~V~~l~~spdg-~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 481 (609)
|++++. ++..+. ....+.|+.|+||+ +.|++|+.|+.|+.||++++ +.++.+..|-+.|..+.|-+++..+
T Consensus 286 DtETG~-~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~------kvvqeYd~hLg~i~~i~F~~~g~rF 357 (503)
T KOG0282|consen 286 DTETGQ-VLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSG------KVVQEYDRHLGAILDITFVDEGRRF 357 (503)
T ss_pred ccccce-EEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccch------HHHHHHHhhhhheeeeEEccCCceE
Confidence 999984 555554 34578899999988 88999999999999999999 7888999999999999999999877
Q ss_pred EEEEeccCCCeEEEEECCCCceeEEEcCC--CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC---ceEEEEeCCC--
Q psy4876 482 LASGGGTADRHIYFWNVSSGACLDSIDTK--SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL---VKVAELHGHS-- 554 (609)
Q Consensus 482 lasggGs~Dg~I~iwd~~t~~~~~~~~~~--~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~---~~~~~l~~h~-- 554 (609)
+.+ +.|+.++||+.+.+..+..+... ....++..+|++++++. -+.|+.|.||.+... .+...+.||.
T Consensus 358 iss---SDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~a--Qs~dN~i~ifs~~~~~r~nkkK~feGh~va 432 (503)
T KOG0282|consen 358 ISS---SDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAA--QSMDNYIAIFSTVPPFRLNKKKRFEGHSVA 432 (503)
T ss_pred eee---ccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehh--hccCceEEEEecccccccCHhhhhcceecc
Confidence 766 48999999999988777665433 36778999999999998 448999999986532 3334567775
Q ss_pred CCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 555 ARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 555 ~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
+.-..+.|||||.+|++|+.||.+.+||..+.....+.+.
T Consensus 433 Gys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka 472 (503)
T KOG0282|consen 433 GYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA 472 (503)
T ss_pred CceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc
Confidence 4567899999999999999999999999988766555443
No 72
>KOG1408|consensus
Probab=99.94 E-value=8.5e-26 Score=235.92 Aligned_cols=298 Identities=19% Similarity=0.246 Sum_probs=229.2
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEE-----------ecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEE
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYII-----------CQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYML 350 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~L 350 (609)
+++++.|++|++||++...+..... -...+...++.-.............+.....+.+++.+|+|++|
T Consensus 395 F~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhL 474 (1080)
T KOG1408|consen 395 FTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHL 474 (1080)
T ss_pred eeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCccee
Confidence 7889999999999998732221110 00000000000000000111111122245689999999999999
Q ss_pred EEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec-----CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 351 GVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN-----TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 351 asgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~-----~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
|+|..-|.++||++..-+....+..|...|.|+.|+ ..+|+++++|..|+|||+...-..++++.+|...|+++.
T Consensus 475 AsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvK 554 (1080)
T KOG1408|consen 475 ASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVK 554 (1080)
T ss_pred cccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEE
Confidence 999999999999999999999999999999999994 478999999999999999887778899999999999999
Q ss_pred EccCC--CEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCce
Q psy4876 426 WSPDG--RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC 503 (609)
Q Consensus 426 ~spdg--~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~ 503 (609)
|--.| ..+++++.|..|.+--.+.... ...-+.++-......+..++..|..+.++..| .|+.|+|||+.+|+.
T Consensus 555 Fa~~gln~~MiscGADksimFr~~qk~~~-g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c---QDrnirif~i~sgKq 630 (1080)
T KOG1408|consen 555 FACNGLNRKMISCGADKSIMFRVNQKASS-GRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC---QDRNIRIFDIESGKQ 630 (1080)
T ss_pred EeecCCceEEEeccCchhhheehhccccC-ceeccccccccccceEEEeeeCCCcceEEEEe---cccceEEEeccccce
Confidence 98877 6789999998876533332110 00011122222345688999999876544443 899999999999999
Q ss_pred eEEEcCC----CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEE
Q psy4876 504 LDSIDTK----SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLR 579 (609)
Q Consensus 504 ~~~~~~~----~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~ 579 (609)
.+.|++. +....+...|.|.|+++.+ .|.+|.++|+.+++++....||...|+.+.|.+|.+.|++++.||.|.
T Consensus 631 ~k~FKgs~~~eG~lIKv~lDPSgiY~atSc--sdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIF 708 (1080)
T KOG1408|consen 631 VKSFKGSRDHEGDLIKVILDPSGIYLATSC--SDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIF 708 (1080)
T ss_pred eeeecccccCCCceEEEEECCCccEEEEee--cCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEE
Confidence 9999743 5788999999999999955 899999999999999999999999999999999999999999999999
Q ss_pred EEEcCC
Q psy4876 580 LWKIFE 585 (609)
Q Consensus 580 iWdl~~ 585 (609)
||.+..
T Consensus 709 vW~lp~ 714 (1080)
T KOG1408|consen 709 VWKLPL 714 (1080)
T ss_pred EEECch
Confidence 999875
No 73
>KOG0289|consensus
Probab=99.94 E-value=4.9e-25 Score=219.56 Aligned_cols=274 Identities=20% Similarity=0.277 Sum_probs=232.6
Q ss_pred EEEEEecC--CCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCC
Q psy4876 272 LNLIDWSH--FNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGY 348 (609)
Q Consensus 272 v~~l~wsp--~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~ 348 (609)
+..++..+ +.+++++.|..+.++|... ++ .+..++ |...|+.+.++++..
T Consensus 222 i~ald~~~s~~~ilTGG~d~~av~~d~~s-------------------------~q--~l~~~~Gh~kki~~v~~~~~~~ 274 (506)
T KOG0289|consen 222 ITALDIIPSSSKILTGGEDKTAVLFDKPS-------------------------NQ--ILATLKGHTKKITSVKFHKDLD 274 (506)
T ss_pred eeEEeecCCCCcceecCCCCceEEEecch-------------------------hh--hhhhccCcceEEEEEEeccchh
Confidence 45667766 4689999999999999877 44 344555 899999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEc-cCCCCeEEEE
Q psy4876 349 MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQ-NHTQEVCGLK 425 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~ 425 (609)
.+++++.|-.|+||.............|..+|+.+.. +|.+|++++.||.+.+.|++++........ ...-.+++.+
T Consensus 275 ~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~ 354 (506)
T KOG0289|consen 275 TVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAA 354 (506)
T ss_pred heeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEee
Confidence 9999999999999999888888888999999999988 589999999999999999999854333322 2334689999
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD 505 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~ 505 (609)
|+|||.+|++|..|+.|+|||+..+ ..+..|.+|.++|+.++|+.+| +.++++ ..|+.|++||++..+...
T Consensus 355 fHpDgLifgtgt~d~~vkiwdlks~------~~~a~Fpght~~vk~i~FsENG-Y~Lat~--add~~V~lwDLRKl~n~k 425 (506)
T KOG0289|consen 355 FHPDGLIFGTGTPDGVVKIWDLKSQ------TNVAKFPGHTGPVKAISFSENG-YWLATA--ADDGSVKLWDLRKLKNFK 425 (506)
T ss_pred EcCCceEEeccCCCceEEEEEcCCc------cccccCCCCCCceeEEEeccCc-eEEEEE--ecCCeEEEEEehhhcccc
Confidence 9999999999999999999999988 6778899999999999999988 566665 389999999999888888
Q ss_pred EEcCCC--CeEEEEEcCCCCeEEEEEecCCCeEEEEEC--CCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 506 SIDTKS--QVCALLWNSDYKELVSAHGFAQNQLIIWKY--PSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 506 ~~~~~~--~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~--~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
++.... .+.++.|...|.+|+++ +.+=+|++++- ..+.++..+..|.+..+++.|....++++++|.|..++++
T Consensus 426 t~~l~~~~~v~s~~fD~SGt~L~~~--g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 426 TIQLDEKKEVNSLSFDQSGTYLGIA--GSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLY 503 (506)
T ss_pred eeeccccccceeEEEcCCCCeEEee--cceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEe
Confidence 776544 69999999999999985 24555555552 3678888999999999999999999999999999999988
Q ss_pred Ec
Q psy4876 582 KI 583 (609)
Q Consensus 582 dl 583 (609)
.+
T Consensus 504 a~ 505 (506)
T KOG0289|consen 504 AL 505 (506)
T ss_pred ec
Confidence 65
No 74
>KOG1446|consensus
Probab=99.94 E-value=2.8e-24 Score=207.54 Aligned_cols=247 Identities=16% Similarity=0.214 Sum_probs=206.8
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEec--CCeEEEEEcCCCCe
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSR--CGNIVHHDVRSRDH 409 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~--dg~I~iwd~~~~~~ 409 (609)
..+.|.++.|+.+|.+|++++.|..++|||..+++.++++..+...|..++| +.+.++.++. |.+|+..++.+. +
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dN-k 91 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDN-K 91 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecC-c
Confidence 4688999999999999999999999999999999999999999889999999 4566666665 889999999986 6
Q ss_pred eEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 410 KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
.++.+.||...|.+|+.+|-+..+++++.|++|++||++.. .+...+.. ..-..++|.|.| .++|++. .
T Consensus 92 ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~------~cqg~l~~--~~~pi~AfDp~G-LifA~~~--~ 160 (311)
T KOG1446|consen 92 YLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVK------KCQGLLNL--SGRPIAAFDPEG-LIFALAN--G 160 (311)
T ss_pred eEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCC------CCceEEec--CCCcceeECCCC-cEEEEec--C
Confidence 89999999999999999998899999999999999999976 44444432 223467899988 5777764 3
Q ss_pred CCeEEEEECCCC--ceeEEEcC----CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCE---EEE
Q psy4876 490 DRHIYFWNVSSG--ACLDSIDT----KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARV---LNL 560 (609)
Q Consensus 490 Dg~I~iwd~~t~--~~~~~~~~----~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V---~~l 560 (609)
...|++||++.- .+..++.. ......+.|+++|++++.++ ..+.+++.|.-+|..+..+.++...- ...
T Consensus 161 ~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT--~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a 238 (311)
T KOG1446|consen 161 SELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLST--NASFIYLLDAFDGTVKSTFSGYPNAGNLPLSA 238 (311)
T ss_pred CCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEe--CCCcEEEEEccCCcEeeeEeeccCCCCcceeE
Confidence 449999999853 34444432 45899999999999999955 79999999999999999888775432 678
Q ss_pred EEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 561 AMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 561 ~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
+|+||+++|++|+.||+|.+|++.++.+..+-..
T Consensus 239 ~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 239 TFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRG 272 (311)
T ss_pred EECCCCcEEEEecCCCcEEEEEcCCCcEeeEecC
Confidence 8999999999999999999999988876654433
No 75
>KOG1407|consensus
Probab=99.94 E-value=1.7e-24 Score=203.33 Aligned_cols=275 Identities=17% Similarity=0.265 Sum_probs=230.8
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
.|.+|+|+.+| ++.++.|+++.+|+++. .....-.... |.+.|-.++|+|..
T Consensus 22 ~v~Sv~wn~~g~~lasgs~dktv~v~n~e~-------------------------~r~~~~~~~~gh~~svdql~w~~~~ 76 (313)
T KOG1407|consen 22 KVHSVAWNCDGTKLASGSFDKTVSVWNLER-------------------------DRFRKELVYRGHTDSVDQLCWDPKH 76 (313)
T ss_pred cceEEEEcccCceeeecccCCceEEEEecc-------------------------hhhhhhhcccCCCcchhhheeCCCC
Confidence 47889999987 77799999999999987 4322222333 88899999999865
Q ss_pred -CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 348 -YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 348 -~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
..|++++.|..|++||+..+++...+......+.-..+ ++.+++.++.|..|.+.|.++.. .. .-......+..++
T Consensus 77 ~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~-~~-~~~~~~~e~ne~~ 154 (313)
T KOG1407|consen 77 PDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYK-IV-NEEQFKFEVNEIS 154 (313)
T ss_pred CcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccc-ee-ehhcccceeeeee
Confidence 89999999999999999999999988866666654444 78999999999999999999863 33 3334566788899
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD 505 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~ 505 (609)
|+-++.+|+....-|+|.|...... +++..+..|.....||.|+|+|+ .+|+| +.|..+.+||+..--|++
T Consensus 155 w~~~nd~Fflt~GlG~v~ILsypsL------kpv~si~AH~snCicI~f~p~Gr-yfA~G--sADAlvSLWD~~ELiC~R 225 (313)
T KOG1407|consen 155 WNNSNDLFFLTNGLGCVEILSYPSL------KPVQSIKAHPSNCICIEFDPDGR-YFATG--SADALVSLWDVDELICER 225 (313)
T ss_pred ecCCCCEEEEecCCceEEEEecccc------ccccccccCCcceEEEEECCCCc-eEeec--cccceeeccChhHhhhhe
Confidence 9988888777766799999988766 89999999999999999999995 67776 589999999999999999
Q ss_pred EEcC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC---------
Q psy4876 506 SIDT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD--------- 575 (609)
Q Consensus 506 ~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D--------- 575 (609)
.+.. .-+|..+.|+.+|++|++ +++|..|-|=++++|..+.+++ +.++...++|+|...+||-++.|
T Consensus 226 ~isRldwpVRTlSFS~dg~~lAS--aSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk~~d~~rea 302 (313)
T KOG1407|consen 226 CISRLDWPVRTLSFSHDGRMLAS--ASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDDKDGDSNREA 302 (313)
T ss_pred eeccccCceEEEEeccCcceeec--cCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecCCCCcccccc
Confidence 9875 459999999999999999 5599999999999999999986 78889999999999999988765
Q ss_pred CCEEEEEcC
Q psy4876 576 ETLRLWKIF 584 (609)
Q Consensus 576 g~I~iWdl~ 584 (609)
|+|++|-+.
T Consensus 303 g~vKiFG~~ 311 (313)
T KOG1407|consen 303 GTVKIFGLS 311 (313)
T ss_pred ceeEEecCC
Confidence 567776554
No 76
>KOG0264|consensus
Probab=99.94 E-value=3.6e-25 Score=222.52 Aligned_cols=254 Identities=23% Similarity=0.485 Sum_probs=211.4
Q ss_pred ceeeeeeecCCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCee----------EEEecCCCCceEEEEec---CCEE
Q psy4876 325 AIDHLMDLEGNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKK----------CRTMDGHDVRVGALAWN---TYIL 390 (609)
Q Consensus 325 ~~~~l~~~~h~~~V~~v~~spdg-~~Lasgs~dg~I~iwd~~~~~~----------~~~l~~h~~~V~~l~~~---~~~L 390 (609)
.++....+.|.+.|+.+.+.|+. ..+|+++..+.|.|||..+... -..+.+|...-.+|+|+ ...|
T Consensus 114 ~v~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~L 193 (422)
T KOG0264|consen 114 KVEISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTL 193 (422)
T ss_pred ceEEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeE
Confidence 44555556699999999999976 7778888999999999865321 12678899988889995 4688
Q ss_pred EEEecCCeEEEEEcCCCCe------eEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec
Q psy4876 391 SSGSRCGNIVHHDVRSRDH------KVALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS 463 (609)
Q Consensus 391 ~sgs~dg~I~iwd~~~~~~------~~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~ 463 (609)
++++.|+.|.+||+..... ....+.+|...|..++|++ +..+|++++.|+.+.|||+++.. .++.+...
T Consensus 194 ls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~----~~~~~~~~ 269 (422)
T KOG0264|consen 194 LSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNT----SKPSHSVK 269 (422)
T ss_pred eeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCC----CCCccccc
Confidence 9999999999999986543 3567889999999999999 66789999999999999999631 26777888
Q ss_pred CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC-ceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 464 RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG-ACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 464 ~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~-~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
+|.+.|.|++|+|.+.++||+| +.|++|++||+++- +++.++..+ ..|..+.|+|+...+++.+| .|+.+.|||+
T Consensus 270 ah~~~vn~~~fnp~~~~ilAT~--S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg-~D~rl~vWDl 346 (422)
T KOG0264|consen 270 AHSAEVNCVAFNPFNEFILATG--SADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSG-TDRRLNVWDL 346 (422)
T ss_pred ccCCceeEEEeCCCCCceEEec--cCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecc-cCCcEEEEec
Confidence 9999999999999999999998 48999999999954 467777766 48999999999988888766 8999999998
Q ss_pred CCC--------------ceEEEEeCCCCCEEEEEEeCCCC-EEEEEECCCCEEEEEcCC
Q psy4876 542 PSL--------------VKVAELHGHSARVLNLAMSPDET-TVLSAGADETLRLWKIFE 585 (609)
Q Consensus 542 ~~~--------------~~~~~l~~h~~~V~~l~~spdg~-~L~s~s~Dg~I~iWdl~~ 585 (609)
... +.+..-.||...|.++.|+|+.. .|+|++.|+.+.||++..
T Consensus 347 s~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 347 SRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred cccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 532 22344468999999999999877 567889999999999874
No 77
>KOG0275|consensus
Probab=99.93 E-value=1.6e-25 Score=215.16 Aligned_cols=249 Identities=17% Similarity=0.276 Sum_probs=212.0
Q ss_pred ecCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEec--------CCCCceEEEEe--cCCEEEEEecCCeEEE
Q psy4876 332 LEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMD--------GHDVRVGALAW--NTYILSSGSRCGNIVH 401 (609)
Q Consensus 332 ~~h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~--------~h~~~V~~l~~--~~~~L~sgs~dg~I~i 401 (609)
+.....+.|..|+|||+||++|+.||-|.||+..+|+..+.++ -+...|.|+.| +...|++|+.||.|++
T Consensus 210 Fg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKv 289 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKV 289 (508)
T ss_pred cccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEE
Confidence 3356778899999999999999999999999999987655433 47899999999 5789999999999999
Q ss_pred EEcCCCCeeEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCc
Q psy4876 402 HDVRSRDHKVALLQ-NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPN 480 (609)
Q Consensus 402 wd~~~~~~~~~~~~-~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 480 (609)
|.+.++. ++..+. .|+..|+|+.|+.|+..+++++.|.+|+|.-+.+| +++..+.+|...|+...|.++|..
T Consensus 290 Wri~tG~-ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSG------K~LKEfrGHsSyvn~a~ft~dG~~ 362 (508)
T KOG0275|consen 290 WRIETGQ-CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSG------KCLKEFRGHSSYVNEATFTDDGHH 362 (508)
T ss_pred EEEecch-HHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccc------hhHHHhcCccccccceEEcCCCCe
Confidence 9999985 555554 89999999999999999999999999999999999 899999999999999999999977
Q ss_pred EEEEEeccCCCeEEEEECCCCceeEEEcCC---CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC---CC
Q psy4876 481 VLASGGGTADRHIYFWNVSSGACLDSIDTK---SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG---HS 554 (609)
Q Consensus 481 llasggGs~Dg~I~iwd~~t~~~~~~~~~~---~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~---h~ 554 (609)
++.+ +.||+|++|+..+.+|+.++... ..|.++..-|....-++.+. ..++|+|.++. |..+..+.. ..
T Consensus 363 iisa---SsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN-rsntv~imn~q-GQvVrsfsSGkREg 437 (508)
T KOG0275|consen 363 IISA---SSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN-RSNTVYIMNMQ-GQVVRSFSSGKREG 437 (508)
T ss_pred EEEe---cCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc-CCCeEEEEecc-ceEEeeeccCCccC
Confidence 6655 47999999999999999998754 37888888887766555443 78899998864 566666632 33
Q ss_pred CCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhh
Q psy4876 555 ARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKK 592 (609)
Q Consensus 555 ~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~ 592 (609)
+...+++.+|.|.++++.+.|+.++.|.+..+..+...
T Consensus 438 GdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl 475 (508)
T KOG0275|consen 438 GDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTL 475 (508)
T ss_pred CceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeee
Confidence 55778889999999999999999999999988766543
No 78
>KOG1407|consensus
Probab=99.93 E-value=1.3e-24 Score=204.00 Aligned_cols=244 Identities=20% Similarity=0.324 Sum_probs=208.3
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEE--EecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCR--TMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRD 408 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~--~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~ 408 (609)
|...|.+|+|+.+|..||+|+.|+++.||+++..+... ...+|.+.|-.++| ++..|++++.|.+|++||++.+.
T Consensus 19 ~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k 98 (313)
T KOG1407|consen 19 HVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGK 98 (313)
T ss_pred hhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCc
Confidence 78899999999999999999999999999998775544 34679999999999 47899999999999999999974
Q ss_pred eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 409 HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 409 ~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs 488 (609)
++.......+.+ -+.|+|+|+++++++.|..|.+.|.++. +.+... ...-.+..++|+.++..++++.
T Consensus 99 -~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~------~~~~~~-~~~~e~ne~~w~~~nd~Fflt~--- 166 (313)
T KOG1407|consen 99 -CTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTY------KIVNEE-QFKFEVNEISWNNSNDLFFLTN--- 166 (313)
T ss_pred -EEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEeccc------ceeehh-cccceeeeeeecCCCCEEEEec---
Confidence 565555444444 4899999999999999999999999976 333333 2445678899997665555554
Q ss_pred CCCeEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCC
Q psy4876 489 ADRHIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDET 567 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~ 567 (609)
.-|+|.|.....-+++.++..| +...+|.|+|+|+++++ |+.|-.+.+||+....++..+..+.-+|..+.|+.||+
T Consensus 167 GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~--GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~ 244 (313)
T KOG1407|consen 167 GLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFAT--GSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGR 244 (313)
T ss_pred CCceEEEEeccccccccccccCCcceEEEEECCCCceEee--ccccceeeccChhHhhhheeeccccCceEEEEeccCcc
Confidence 3799999999999999999876 48899999999999999 66899999999999999999999999999999999999
Q ss_pred EEEEEECCCCEEEEEcCCCccchh
Q psy4876 568 TVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 568 ~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
+||+|++|..|-|=++.++....+
T Consensus 245 ~lASaSEDh~IDIA~vetGd~~~e 268 (313)
T KOG1407|consen 245 MLASASEDHFIDIAEVETGDRVWE 268 (313)
T ss_pred eeeccCccceEEeEecccCCeEEE
Confidence 999999999998888877776543
No 79
>PTZ00420 coronin; Provisional
Probab=99.93 E-value=1.9e-23 Score=227.40 Aligned_cols=224 Identities=17% Similarity=0.289 Sum_probs=176.2
Q ss_pred EeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCe-------eEEEEccCCCCeE
Q psy4876 353 GTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDH-------KVALLQNHTQEVC 422 (609)
Q Consensus 353 gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~-------~~~~~~~h~~~V~ 422 (609)
|+.+|.|++|+......+..+.+|...|.+++|+ +.+|++|+.||.|++||+.+... .+..+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 5667899999998888889999999999999995 57999999999999999986421 3446788999999
Q ss_pred EEEEccCCCE-EEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC
Q psy4876 423 GLKWSPDGRY-LASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG 501 (609)
Q Consensus 423 ~l~~spdg~~-lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~ 501 (609)
+++|+|++.. |++++.|++|+|||++++ +.+..+. |...|.+++|+|+|. +|++++ .|+.|+|||++++
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg------~~~~~i~-~~~~V~SlswspdG~-lLat~s--~D~~IrIwD~Rsg 199 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENE------KRAFQIN-MPKKLSSLKWNIKGN-LLSGTC--VGKHMHIIDPRKQ 199 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCC------cEEEEEe-cCCcEEEEEECCCCC-EEEEEe--cCCEEEEEECCCC
Confidence 9999998875 578999999999999987 4555554 567899999999986 555553 7999999999999
Q ss_pred ceeEEEcCCC-Ce-----EEEEEcCCCCeEEEEEecCC---CeEEEEECCC-CceEEEEe--CCCCCEEEEEEeCCCCEE
Q psy4876 502 ACLDSIDTKS-QV-----CALLWNSDYKELVSAHGFAQ---NQLIIWKYPS-LVKVAELH--GHSARVLNLAMSPDETTV 569 (609)
Q Consensus 502 ~~~~~~~~~~-~v-----~sl~~s~~g~~l~~~sG~~d---g~I~Iwd~~~-~~~~~~l~--~h~~~V~~l~~spdg~~L 569 (609)
+.+.++..|. .+ ....|++++.++++++ +++ ++|+|||++. ..++..+. .+.+.+......++|.++
T Consensus 200 ~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG-~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~ 278 (568)
T PTZ00420 200 EIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTG-FSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIY 278 (568)
T ss_pred cEEEEEecccCCceeEEEEeeeEcCCCCEEEEEE-cCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEE
Confidence 9998887664 22 2234568888888864 332 4899999985 45555443 233444444445568899
Q ss_pred EEEECCCCEEEEEcCCCc
Q psy4876 570 LSAGADETLRLWKIFEKV 587 (609)
Q Consensus 570 ~s~s~Dg~I~iWdl~~~~ 587 (609)
++|+.|++|++|++..+.
T Consensus 279 lsGkGD~tIr~~e~~~~~ 296 (568)
T PTZ00420 279 LIGKGDGNCRYYQHSLGS 296 (568)
T ss_pred EEEECCCeEEEEEccCCc
Confidence 999999999999997653
No 80
>KOG0641|consensus
Probab=99.93 E-value=5.9e-23 Score=188.84 Aligned_cols=294 Identities=18% Similarity=0.262 Sum_probs=222.3
Q ss_pred cCCceeEEEEEecCCC-eEEEEc-CCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEE
Q psy4876 266 IQNDYYLNLIDWSHFN-VLAVAL-GGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVA 342 (609)
Q Consensus 266 ~~~~~~v~~l~wsp~~-lla~s~-dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~ 342 (609)
+.+...|..++|+|.| +.|++. ..+.+|-....-. .+...+..... .......... |.+.|.|.+
T Consensus 29 l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~--------~~r~~hea~~~----pp~v~~kr~khhkgsiyc~~ 96 (350)
T KOG0641|consen 29 LEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALI--------DLRHAHEAAKQ----PPSVLCKRNKHHKGSIYCTA 96 (350)
T ss_pred ecchhheeeEEecCCCceEEeccCCceEEEEcccccc--------CcccccccccC----CCeEEeeeccccCccEEEEE
Confidence 3445568999999986 777655 4677776443210 00000000000 1111112223 899999999
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCee-----EEEecCCCCceEEEEe-c-----CCEEEEEe-cCCeEEEEEcCCCCee
Q psy4876 343 WIQEGYMLGVGTSLGTVQLWDVSAKKK-----CRTMDGHDVRVGALAW-N-----TYILSSGS-RCGNIVHHDVRSRDHK 410 (609)
Q Consensus 343 ~spdg~~Lasgs~dg~I~iwd~~~~~~-----~~~l~~h~~~V~~l~~-~-----~~~L~sgs-~dg~I~iwd~~~~~~~ 410 (609)
|+|+|.+||+|+.|.+|++.-.+...+ -..+.-|.+.|..++| + +.+|++++ .|..|++-|...+ +.
T Consensus 97 ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g-~~ 175 (350)
T KOG0641|consen 97 WSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRG-QG 175 (350)
T ss_pred ecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCC-Cc
Confidence 999999999999999999987654332 2356679999999999 2 46777665 4778888898887 47
Q ss_pred EEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC-------CcccEEEEEEcCCCCcEEE
Q psy4876 411 VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR-------HQAAVKAIAWCPWSPNVLA 483 (609)
Q Consensus 411 ~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~-------h~~~V~~l~~sp~~~~lla 483 (609)
.+.+.+|++.|.++ ++-+|-+|++|++|.+|++||++-. .++..+.. ....|.+++..|.| .||+
T Consensus 176 ~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~------~~v~~l~~~~~~~glessavaav~vdpsg-rll~ 247 (350)
T KOG0641|consen 176 FHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVN------SCVNTLDNDFHDGGLESSAVAAVAVDPSG-RLLA 247 (350)
T ss_pred ceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeecc------ceeeeccCcccCCCcccceeEEEEECCCc-ceee
Confidence 88899999999876 3335889999999999999999876 44444421 23679999999988 6888
Q ss_pred EEeccCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC----ceEEEEeCCCCCEE
Q psy4876 484 SGGGTADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL----VKVAELHGHSARVL 558 (609)
Q Consensus 484 sggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~----~~~~~l~~h~~~V~ 558 (609)
+|. .|....+||++.+..++.+..++ .|.++.|+|...++++++ .|..|++-|+... -.+.....|.+.+.
T Consensus 248 sg~--~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~s--yd~~ikltdlqgdla~el~~~vv~ehkdk~i 323 (350)
T KOG0641|consen 248 SGH--ADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCS--YDMKIKLTDLQGDLAHELPIMVVAEHKDKAI 323 (350)
T ss_pred ecc--CCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEec--ccceEEEeecccchhhcCceEEEEeccCceE
Confidence 874 89999999999999999997664 899999999999999954 8999999998532 23344567999999
Q ss_pred EEEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 559 NLAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 559 ~l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
.+.|+|..-.+++.+.|.++.+|-+.
T Consensus 324 ~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 324 QCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EEEecCccceeeeccCcceEEEeccC
Confidence 99999999999999999999999864
No 81
>KOG0293|consensus
Probab=99.93 E-value=8.5e-25 Score=216.46 Aligned_cols=249 Identities=17% Similarity=0.249 Sum_probs=211.2
Q ss_pred eec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC---eeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEc
Q psy4876 331 DLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK---KKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDV 404 (609)
Q Consensus 331 ~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~---~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~ 404 (609)
.+. |.+.|.-+.||++|+|||+++.|.+..||++... +...++.+|..+|.-+.| +.++|++++.|..+.+||+
T Consensus 219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv 298 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDV 298 (519)
T ss_pred hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccC
Confidence 344 8999999999999999999999999999988654 457889999999999999 5689999999999999999
Q ss_pred CCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCc-ccEEEEEEcCCCCcEEE
Q psy4876 405 RSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ-AAVKAIAWCPWSPNVLA 483 (609)
Q Consensus 405 ~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~-~~V~~l~~sp~~~~lla 483 (609)
.+++.....-.+|...+.+++|.|||..+++|+.|+.|..||++.. .+...++-. ..|.+++..+||..+++
T Consensus 299 ~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn-------~~~~W~gvr~~~v~dlait~Dgk~vl~ 371 (519)
T KOG0293|consen 299 DTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGN-------ILGNWEGVRDPKVHDLAITYDGKYVLL 371 (519)
T ss_pred CcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcc-------hhhcccccccceeEEEEEcCCCcEEEE
Confidence 9986333333345688999999999999999999999999999853 333333322 45899999999999998
Q ss_pred EEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCC--EEEEE
Q psy4876 484 SGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSAR--VLNLA 561 (609)
Q Consensus 484 sggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~--V~~l~ 561 (609)
++ .|..|++++..+......+..+.+++++..+.+++++++ .-.+..|++||+.....+..+.||... |..-|
T Consensus 372 v~---~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~Lv--nL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSC 446 (519)
T KOG0293|consen 372 VT---VDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALV--NLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSC 446 (519)
T ss_pred Ee---cccceeeechhhhhhhccccccCceeEEEEcCCCcEEEE--EcccCeeEEeecchhhHHHHhhcccccceEEEec
Confidence 87 799999999998888888888999999999999999998 458999999999988888888898754 44556
Q ss_pred EeC-CCCEEEEEECCCCEEEEEcCCCccchh
Q psy4876 562 MSP-DETTVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 562 ~sp-dg~~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
|.- +..++++|++|+.|+||+...+.....
T Consensus 447 Fgg~~~~fiaSGSED~kvyIWhr~sgkll~~ 477 (519)
T KOG0293|consen 447 FGGGNDKFIASGSEDSKVYIWHRISGKLLAV 477 (519)
T ss_pred cCCCCcceEEecCCCceEEEEEccCCceeEe
Confidence 654 558999999999999999998876543
No 82
>PTZ00420 coronin; Provisional
Probab=99.93 E-value=5e-23 Score=224.19 Aligned_cols=229 Identities=13% Similarity=0.250 Sum_probs=173.4
Q ss_pred eeeeec-CCCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCCe--------eEEEecCCCCceEEEEecC---CEEEEEe
Q psy4876 328 HLMDLE-GNENVCSVAWIQE-GYMLGVGTSLGTVQLWDVSAKK--------KCRTMDGHDVRVGALAWNT---YILSSGS 394 (609)
Q Consensus 328 ~l~~~~-h~~~V~~v~~spd-g~~Lasgs~dg~I~iwd~~~~~--------~~~~l~~h~~~V~~l~~~~---~~L~sgs 394 (609)
.+..+. |.+.|.+++|+|+ +.+||+|+.||.|+|||+.++. .+..+.+|...|.+++|++ .+|++++
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS 145 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSG 145 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEe
Confidence 455666 9999999999997 7999999999999999997642 3456789999999999963 3567999
Q ss_pred cCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEE--
Q psy4876 395 RCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI-- 472 (609)
Q Consensus 395 ~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l-- 472 (609)
.|++|++||++++. .+..+. |...|.+++|+|+|.+|++++.|+.|+|||++++ ..+..+.+|.+.+.+.
T Consensus 146 ~DgtIrIWDl~tg~-~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg------~~i~tl~gH~g~~~s~~v 217 (568)
T PTZ00420 146 FDSFVNIWDIENEK-RAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQ------EIASSFHIHDGGKNTKNI 217 (568)
T ss_pred CCCeEEEEECCCCc-EEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCC------cEEEEEecccCCceeEEE
Confidence 99999999999874 444454 6678999999999999999999999999999988 6778888898765433
Q ss_pred ---EEcCCCCcEEEEEec-cCCCeEEEEECCC-CceeEEEcCCCC--eEEEEEc-CCCCeEEEEEecCCCeEEEEECCCC
Q psy4876 473 ---AWCPWSPNVLASGGG-TADRHIYFWNVSS-GACLDSIDTKSQ--VCALLWN-SDYKELVSAHGFAQNQLIIWKYPSL 544 (609)
Q Consensus 473 ---~~sp~~~~llasggG-s~Dg~I~iwd~~t-~~~~~~~~~~~~--v~sl~~s-~~g~~l~~~sG~~dg~I~Iwd~~~~ 544 (609)
.|++++..++++|.. ..++.|+|||+++ ++++..+..+.. +....|. +++.++++ |..|+.|++|++..+
T Consensus 218 ~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~ls--GkGD~tIr~~e~~~~ 295 (568)
T PTZ00420 218 WIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLI--GKGDGNCRYYQHSLG 295 (568)
T ss_pred EeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEE--EECCCeEEEEEccCC
Confidence 344777655655520 1125899999994 666766654432 2223444 44666666 457999999999776
Q ss_pred ceEEEEe--CCCCCEEEEEEeCCCC
Q psy4876 545 VKVAELH--GHSARVLNLAMSPDET 567 (609)
Q Consensus 545 ~~~~~l~--~h~~~V~~l~~spdg~ 567 (609)
. +..+. .+..++.+++|.|+..
T Consensus 296 ~-~~~l~~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 296 S-IRKVNEYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred c-EEeecccccCCCccceEEccccc
Confidence 4 33332 2567888999999743
No 83
>KOG0640|consensus
Probab=99.93 E-value=1.1e-24 Score=208.49 Aligned_cols=296 Identities=20% Similarity=0.274 Sum_probs=229.3
Q ss_pred eeEEEEEecCCC-eE-EEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHFN-VL-AVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~~-ll-a~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
..+.+-+||+|| ++ +|+.|..|+|.|++.--. -+ .-.+......+ ...-.+.++- |.+.|+++.|+|.
T Consensus 113 ~~cR~aafs~DG~lvATGsaD~SIKildvermla------ks-~~~em~~~~~q--a~hPvIRTlYDH~devn~l~FHPr 183 (430)
T KOG0640|consen 113 SPCRAAAFSPDGSLVATGSADASIKILDVERMLA------KS-KPKEMISGDTQ--ARHPVIRTLYDHVDEVNDLDFHPR 183 (430)
T ss_pred cceeeeeeCCCCcEEEccCCcceEEEeehhhhhh------hc-chhhhccCCcc--cCCceEeehhhccCcccceeecch
Confidence 347889999998 44 488899999999984100 00 00000000000 1112334444 9999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEec--CCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEE--EEccCCCC
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMD--GHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVA--LLQNHTQE 420 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~--~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~--~~~~h~~~ 420 (609)
...|++|+.|++|++||.......+.++ ....+|.+|.|+ |.+|+.|....++++||+.+.+..+. .-.+|++.
T Consensus 184 e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~a 263 (430)
T KOG0640|consen 184 ETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGA 263 (430)
T ss_pred hheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccc
Confidence 9999999999999999997653333222 245689999994 79999999999999999998642222 23479999
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec-CCc-ccEEEEEEcCCCCcEEEEEeccCCCeEEEEEC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS-RHQ-AAVKAIAWCPWSPNVLASGGGTADRHIYFWNV 498 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~-~h~-~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~ 498 (609)
|+++.+++.|++.++|+.||.|+|||--++ +++.++. .|. ..|.+..|..+++++|.+| .|..+++|.+
T Consensus 264 i~~V~Ys~t~~lYvTaSkDG~IklwDGVS~------rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG---~DS~vkLWEi 334 (430)
T KOG0640|consen 264 ITQVRYSSTGSLYVTASKDGAIKLWDGVSN------RCVRTIGNAHGGSEVCSAVFTKNGKYILSSG---KDSTVKLWEI 334 (430)
T ss_pred eeEEEecCCccEEEEeccCCcEEeeccccH------HHHHHHHhhcCCceeeeEEEccCCeEEeecC---Ccceeeeeee
Confidence 999999999999999999999999998877 6776664 343 4789999999998888776 8999999999
Q ss_pred CCCceeEEEcCCC------CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEE-eCCCCCEEEEEEeCCCCEEEE
Q psy4876 499 SSGACLDSIDTKS------QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL-HGHSARVLNLAMSPDETTVLS 571 (609)
Q Consensus 499 ~t~~~~~~~~~~~------~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l-~~h~~~V~~l~~spdg~~L~s 571 (609)
.++.++..+.+.+ .-+...|+....+++.. ....+.++-||.++...+..+ .+|.+.+..+.-||.+.-+++
T Consensus 335 ~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~p-DEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmT 413 (430)
T KOG0640|consen 335 STGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFP-DEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMT 413 (430)
T ss_pred cCCceEEEEecCCcccchhhhhhhhhcCccceEEcc-ccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceee
Confidence 9999999887542 23556788888887775 335788999999998777655 589999999999999999999
Q ss_pred EECCCCEEEEEcC
Q psy4876 572 AGADETLRLWKIF 584 (609)
Q Consensus 572 ~s~Dg~I~iWdl~ 584 (609)
|+.|-.+|+|--.
T Consensus 414 csdD~raRFWyrr 426 (430)
T KOG0640|consen 414 CSDDFRARFWYRR 426 (430)
T ss_pred ecccceeeeeeec
Confidence 9999999999643
No 84
>KOG0647|consensus
Probab=99.93 E-value=1.4e-23 Score=200.95 Aligned_cols=264 Identities=16% Similarity=0.199 Sum_probs=206.0
Q ss_pred eEEEEEecCC--CeE-EEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 271 YLNLIDWSHF--NVL-AVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 271 ~v~~l~wsp~--~ll-a~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
.|..|+|||. +++ |++.|++|++|+++.. +.........|.++|.+++|+.||
T Consensus 29 sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~------------------------g~~~~ka~~~~~~PvL~v~Wsddg 84 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSWDGTVRIWEVQNS------------------------GQLVPKAQQSHDGPVLDVCWSDDG 84 (347)
T ss_pred chheeEeccccCceEEecccCCceEEEEEecC------------------------CcccchhhhccCCCeEEEEEccCC
Confidence 4778999994 455 7889999999999872 233332233389999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec----CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN----TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCG 423 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~----~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 423 (609)
..+++|+.|+.+++||+.++ .+..+..|.++|.++.|- -..|++|+.|.+|+.||.+.. .++.++. -.+.|.+
T Consensus 85 skVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~-~pv~t~~-LPeRvYa 161 (347)
T KOG0647|consen 85 SKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSS-NPVATLQ-LPERVYA 161 (347)
T ss_pred ceEEeeccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCC-Ceeeeee-ccceeee
Confidence 99999999999999999998 566777899999999992 258899999999999999986 4566655 3455666
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCce
Q psy4876 424 LKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC 503 (609)
Q Consensus 424 l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~ 503 (609)
+..- ..+++++..++.|.+|+++.+-.. .......-.-.++||+..++.... +.| +..|.+.|..+..+..
T Consensus 162 ~Dv~--~pm~vVata~r~i~vynL~n~~te----~k~~~SpLk~Q~R~va~f~d~~~~-alG--siEGrv~iq~id~~~~ 232 (347)
T KOG0647|consen 162 ADVL--YPMAVVATAERHIAVYNLENPPTE----FKRIESPLKWQTRCVACFQDKDGF-ALG--SIEGRVAIQYIDDPNP 232 (347)
T ss_pred hhcc--CceeEEEecCCcEEEEEcCCCcch----hhhhcCcccceeeEEEEEecCCce-Eee--eecceEEEEecCCCCc
Confidence 6553 457888999999999999876221 111111123457899998887655 554 5899999999987633
Q ss_pred e--EEEcCC----------CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEE
Q psy4876 504 L--DSIDTK----------SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLS 571 (609)
Q Consensus 504 ~--~~~~~~----------~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s 571 (609)
. .+|..| ..|.+|+|+|....|+++. .||+..+||-....+++....|..+|++++|+.+|.++|-
T Consensus 233 ~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaG--sDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaY 310 (347)
T KOG0647|consen 233 KDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAG--SDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAY 310 (347)
T ss_pred cCceeEEEeccCCCCCCceEEecceEeecccceEEEec--CCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEE
Confidence 2 222221 2578999999999999974 7999999999999999998899999999999999998875
Q ss_pred E
Q psy4876 572 A 572 (609)
Q Consensus 572 ~ 572 (609)
+
T Consensus 311 A 311 (347)
T KOG0647|consen 311 A 311 (347)
T ss_pred E
Confidence 5
No 85
>KOG0274|consensus
Probab=99.93 E-value=4e-24 Score=232.01 Aligned_cols=240 Identities=26% Similarity=0.377 Sum_probs=214.2
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEE-ecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCee
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRT-MDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHK 410 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~-l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~ 410 (609)
+...+.+..|. +.++++++.+++|++||..++..+.. +.+|.+.|.++++. +.+|++|+.|.++++||+.++ .+
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg-~C 283 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTG-EC 283 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCC-cE
Confidence 56778888888 56888999999999999999998888 99999999999997 899999999999999999887 58
Q ss_pred EEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCC
Q psy4876 411 VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTAD 490 (609)
Q Consensus 411 ~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~D 490 (609)
...+.+|...|.++... +.++++|+.|.+|++|++.++ ..+..+.+|.++|.++..+ ..++++| +.|
T Consensus 284 ~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~------~~l~l~~~h~~~V~~v~~~---~~~lvsg--s~d 350 (537)
T KOG0274|consen 284 THSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNG------ACLNLLRGHTGPVNCVQLD---EPLLVSG--SYD 350 (537)
T ss_pred EEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCc------ceEEEeccccccEEEEEec---CCEEEEE--ecC
Confidence 99999999999988875 457888999999999999988 7889998899999999997 3577776 599
Q ss_pred CeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC-ceEEEEeCCCCCEEEEEEeCCCCE
Q psy4876 491 RHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL-VKVAELHGHSARVLNLAMSPDETT 568 (609)
Q Consensus 491 g~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~-~~~~~l~~h~~~V~~l~~spdg~~ 568 (609)
+.|++||+.+++++.++.+|. .|.++.+... ..+++ |..|+.|++||+.+. +++..+.+|.+.|.++.+ .+++
T Consensus 351 ~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~S--gs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~ 425 (537)
T KOG0274|consen 351 GTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLS--GSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNF 425 (537)
T ss_pred ceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEe--eeeccceEeecCCchhhhhhhhcCCccccccccc--ccce
Confidence 999999999999999999875 8999988776 67777 558999999999999 999999999999977665 6889
Q ss_pred EEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 569 VLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 569 L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
|++++.|++|++||..+++..+..+.
T Consensus 426 Lvs~~aD~~Ik~WD~~~~~~~~~~~~ 451 (537)
T KOG0274|consen 426 LVSSSADGTIKLWDAEEGECLRTLEG 451 (537)
T ss_pred eEeccccccEEEeecccCceeeeecc
Confidence 99999999999999999888766555
No 86
>KOG0301|consensus
Probab=99.92 E-value=1.5e-23 Score=219.64 Aligned_cols=270 Identities=19% Similarity=0.279 Sum_probs=223.0
Q ss_pred eEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEE-EEEcc-C
Q psy4876 271 YLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCS-VAWIQ-E 346 (609)
Q Consensus 271 ~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~-v~~sp-d 346 (609)
.|..++..++. +++++.||++++|+-.. +.......+. |.+.|.+ +++.+ +
T Consensus 16 DVr~v~~~~~~~i~s~sRd~t~~vw~~~~-------------------------~~~l~~~~~~~~~g~i~~~i~y~e~~ 70 (745)
T KOG0301|consen 16 DVRAVAVTDGVCIISGSRDGTVKVWAKKG-------------------------KQYLETHAFEGPKGFIANSICYAESD 70 (745)
T ss_pred chheeEecCCeEEeecCCCCceeeeeccC-------------------------cccccceecccCcceeeccceecccc
Confidence 34566666665 77788899999999766 4444444555 6676766 88875 4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
+-.|++|+.|++|.+|.......+.++.+|...|.+++. ....+++|+.|.++++|-... ....+.+|...|.+++
T Consensus 71 ~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~~~---l~~~l~gH~asVWAv~ 147 (745)
T KOG0301|consen 71 KGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRIGE---LVYSLQGHTASVWAVA 147 (745)
T ss_pred CcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccceEEecchh---hhcccCCcchheeeee
Confidence 456889999999999999999999999999999999996 344589999999999998764 4566999999999999
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD 505 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~ 505 (609)
.-|++ .+++|+.|.+|++|.-. +.+.++.+|...|+.+++-+++ .++.++ .||.|++|++ +|+++.
T Consensus 148 ~l~e~-~~vTgsaDKtIklWk~~--------~~l~tf~gHtD~VRgL~vl~~~-~flScs---NDg~Ir~w~~-~ge~l~ 213 (745)
T KOG0301|consen 148 SLPEN-TYVTGSADKTIKLWKGG--------TLLKTFSGHTDCVRGLAVLDDS-HFLSCS---NDGSIRLWDL-DGEVLL 213 (745)
T ss_pred ecCCC-cEEeccCcceeeeccCC--------chhhhhccchhheeeeEEecCC-CeEeec---CCceEEEEec-cCceee
Confidence 99988 89999999999999863 6789999999999999999975 345443 8999999999 678877
Q ss_pred EEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 506 SIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 506 ~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
...+| .-+.++....++..+++++ +|++++||+.. ++...+.-....|+++.+-++|. |++|+.||.||||...
T Consensus 214 ~~~ghtn~vYsis~~~~~~~Ivs~g--EDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 214 EMHGHTNFVYSISMALSDGLIVSTG--EDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD 288 (745)
T ss_pred eeeccceEEEEEEecCCCCeEEEec--CCceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence 77665 5799999888888888753 89999999987 66777765556899999998887 7788999999999987
Q ss_pred CCc
Q psy4876 585 EKV 587 (609)
Q Consensus 585 ~~~ 587 (609)
...
T Consensus 289 k~R 291 (745)
T KOG0301|consen 289 KDR 291 (745)
T ss_pred ccc
Confidence 443
No 87
>KOG0269|consensus
Probab=99.92 E-value=2.5e-24 Score=227.80 Aligned_cols=241 Identities=21% Similarity=0.394 Sum_probs=205.0
Q ss_pred CeEEEEEcc-CCCEEEEEeCCCeEEEEeCCC---CeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCe
Q psy4876 337 NVCSVAWIQ-EGYMLGVGTSLGTVQLWDVSA---KKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 337 ~V~~v~~sp-dg~~Lasgs~dg~I~iwd~~~---~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
.+..|.|.. +.++||+++.+|.|.+||+.. .+++..+..|...+.++.|+ +++|++|+.||+|++||++...
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~- 167 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK- 167 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccc-
Confidence 456788885 358999999999999999987 56778899999999999994 7999999999999999999874
Q ss_pred eEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 410 KVALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs 488 (609)
...++.+....|..++|+| .+..|+++.+.|.+.+||++... ++...+..|.++|.|+.|+|++ .+||+||
T Consensus 168 S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~-----r~~~k~~AH~GpV~c~nwhPnr-~~lATGG-- 239 (839)
T KOG0269|consen 168 SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPD-----RCEKKLTAHNGPVLCLNWHPNR-EWLATGG-- 239 (839)
T ss_pred ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCch-----hHHHHhhcccCceEEEeecCCC-ceeeecC--
Confidence 6677778889999999999 77899999999999999999874 6788899999999999999954 7899986
Q ss_pred CCCeEEEEECCCCc--eeEEEcCCCCeEEEEEcCCCCeEE-EEEecCCCeEEEEECCCC-ceEEEEeCCCCCEEEEEEeC
Q psy4876 489 ADRHIYFWNVSSGA--CLDSIDTKSQVCALLWNSDYKELV-SAHGFAQNQLIIWKYPSL-VKVAELHGHSARVLNLAMSP 564 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~--~~~~~~~~~~v~sl~~s~~g~~l~-~~sG~~dg~I~Iwd~~~~-~~~~~l~~h~~~V~~l~~sp 564 (609)
.|+.|+|||+.+++ .+.++.+..+|..+.|-|...+.+ +++-..|-.|+|||++.. -+...+..|...++.++|-.
T Consensus 240 RDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~ 319 (839)
T KOG0269|consen 240 RDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDS 319 (839)
T ss_pred CCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccC
Confidence 99999999998654 567778888999999999987654 444446889999999754 45677888999999999965
Q ss_pred -CCCEEEEEECCCCEEEEEcCCC
Q psy4876 565 -DETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 565 -dg~~L~s~s~Dg~I~iWdl~~~ 586 (609)
|-..|.+++.||+|....+.+.
T Consensus 320 ~d~~~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 320 GDRINLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred CCceeeEeecCccHHHHhhhhcc
Confidence 5568889999998876555443
No 88
>KOG0973|consensus
Probab=99.92 E-value=1e-23 Score=231.49 Aligned_cols=247 Identities=25% Similarity=0.377 Sum_probs=211.4
Q ss_pred CCCCeEEEEEccCCCEEEEEe--CCCeEEEEeCCC------------CeeEEEecCCCCceEEEEe--cCCEEEEEecCC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGT--SLGTVQLWDVSA------------KKKCRTMDGHDVRVGALAW--NTYILSSGSRCG 397 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs--~dg~I~iwd~~~------------~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg 397 (609)
++..|.++..+|+|..+|+|+ .||.++||+.+. .+.+.++..|.+.|.|+.| ||.+||+|++|+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~ 91 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR 91 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence 456799999999999999999 899999998752 2456778889999999999 799999999999
Q ss_pred eEEEEEcCC------C-----------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceE
Q psy4876 398 NIVHHDVRS------R-----------DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIH 460 (609)
Q Consensus 398 ~I~iwd~~~------~-----------~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~ 460 (609)
.|.||+... . ...+..+.+|...|..++|+|++.+||+++.|++|.||+..+. ..+.
T Consensus 92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF------~~~~ 165 (942)
T KOG0973|consen 92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTF------ELLK 165 (942)
T ss_pred eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccc------eeee
Confidence 999999872 1 1356778899999999999999999999999999999999988 7899
Q ss_pred eecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC-------CCeEEEEEcCCCCeEEEEEecCC
Q psy4876 461 SLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK-------SQVCALLWNSDYKELVSAHGFAQ 533 (609)
Q Consensus 461 ~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~-------~~v~sl~~s~~g~~l~~~sG~~d 533 (609)
.+.+|.+.|..+.|.|-|+ ++|+- +.|++|+||++.+..+.+.+... .....+.|+|||++|++.++...
T Consensus 166 vl~~H~s~VKGvs~DP~Gk-y~ASq--sdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~ 242 (942)
T KOG0973|consen 166 VLRGHQSLVKGVSWDPIGK-YFASQ--SDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNG 242 (942)
T ss_pred eeecccccccceEECCccC-eeeee--cCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccC
Confidence 9999999999999999996 55554 48999999998887777777532 35789999999999999765443
Q ss_pred --CeEEEEECCCCceEEEEeCCCCCEEEEEEeCC-----CC------------EEEEEECCCCEEEEEcCCCccc
Q psy4876 534 --NQLIIWKYPSLVKVAELHGHSARVLNLAMSPD-----ET------------TVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 534 --g~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spd-----g~------------~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
..+.|.+-.+++.-..|.||.+++.++.|+|. .+ .+|+|+.|++|-||......+.
T Consensus 243 ~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl 317 (942)
T KOG0973|consen 243 GKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPL 317 (942)
T ss_pred CcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCch
Confidence 46889998888888899999999999999981 11 6789999999999998665554
No 89
>KOG0264|consensus
Probab=99.92 E-value=6.3e-24 Score=213.59 Aligned_cols=249 Identities=22% Similarity=0.402 Sum_probs=195.7
Q ss_pred ceeEEEEEecCCC--eEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEc
Q psy4876 269 DYYLNLIDWSHFN--VLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWI 344 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~s 344 (609)
+-.||.+.+-|.+ ++| .+.++.|+|||.......... .+.+..-..+. |...-++++|+
T Consensus 124 ~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~-----------------~~~~~Pdl~L~gH~~eg~glsWn 186 (422)
T KOG0264|consen 124 DGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKA-----------------SGECRPDLRLKGHEKEGYGLSWN 186 (422)
T ss_pred CccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccc-----------------cccCCCceEEEeecccccccccc
Confidence 3345555555653 454 566789999999874221100 01222333444 77778889999
Q ss_pred cCC-CEEEEEeCCCeEEEEeCCCCe-------eEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCC-CCeeEE
Q psy4876 345 QEG-YMLGVGTSLGTVQLWDVSAKK-------KCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRS-RDHKVA 412 (609)
Q Consensus 345 pdg-~~Lasgs~dg~I~iwd~~~~~-------~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~-~~~~~~ 412 (609)
+.. -.|++|+.|+.|.+||+.... ....+.+|...|..++| +..+|++++.|+.+.|||+|+ ......
T Consensus 187 ~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~ 266 (422)
T KOG0264|consen 187 RQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSH 266 (422)
T ss_pred cccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcc
Confidence 965 678899999999999997542 34678899999999999 568999999999999999996 335667
Q ss_pred EEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 413 LLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 413 ~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
...+|.++|.|++|+| ++..||+|+.|++|.+||+++.. ++++.+.+|...|.+|.|+|....+|+++| .|+
T Consensus 267 ~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~-----~~lh~~e~H~dev~~V~WSPh~etvLASSg--~D~ 339 (422)
T KOG0264|consen 267 SVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLN-----KPLHTFEGHEDEVFQVEWSPHNETVLASSG--TDR 339 (422)
T ss_pred cccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcc-----cCceeccCCCcceEEEEeCCCCCceeEecc--cCC
Confidence 7889999999999999 67789999999999999999885 689999999999999999999999999986 899
Q ss_pred eEEEEECCCCcee--------------EEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 492 HIYFWNVSSGACL--------------DSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 492 ~I~iwd~~t~~~~--------------~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
.+.+||+..-... ....+| ..|..+.|+|+..++++.. .+|+.+.||+..
T Consensus 340 rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~Sv-aeDN~LqIW~~s 404 (422)
T KOG0264|consen 340 RLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASV-AEDNILQIWQMA 404 (422)
T ss_pred cEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEe-cCCceEEEeecc
Confidence 9999999742211 122222 4799999999999988764 489999999975
No 90
>KOG0639|consensus
Probab=99.92 E-value=4.3e-23 Score=208.53 Aligned_cols=280 Identities=20% Similarity=0.285 Sum_probs=222.9
Q ss_pred ceeEEEEEecCC-CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 269 DYYLNLIDWSHF-NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 269 ~~~v~~l~wsp~-~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
.-.|..+..|.. .-+-.+..|.|+|||+....+. ..+..+--+..+..|.++...|||
T Consensus 419 GEvVcAvtIS~~trhVyTgGkgcVKVWdis~pg~k---------------------~PvsqLdcl~rdnyiRSckL~pdg 477 (705)
T KOG0639|consen 419 GEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNK---------------------SPVSQLDCLNRDNYIRSCKLLPDG 477 (705)
T ss_pred CcEEEEEEecCCcceeEecCCCeEEEeeccCCCCC---------------------CccccccccCcccceeeeEecCCC
Confidence 345777888765 4555667789999999863111 112222222367899999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCee--EEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKK--CRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCG 423 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~--~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 423 (609)
+.|++|+.-.++.|||+..... ...+......+.+++. |.++.++++.||.|.|||+... ..+..+++|.+.+.|
T Consensus 478 rtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq-~~VrqfqGhtDGasc 556 (705)
T KOG0639|consen 478 RTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASC 556 (705)
T ss_pred ceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccc-eeeecccCCCCCcee
Confidence 9999999999999999986543 3334433344555555 5789999999999999999985 689999999999999
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCce
Q psy4876 424 LKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC 503 (609)
Q Consensus 424 l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~ 503 (609)
|.+++||..|-+|+-|++|+.||++.+ ..+... .....|.++-.||.+.++++ | ...+.+.|......+.
T Consensus 557 Idis~dGtklWTGGlDntvRcWDlreg------rqlqqh-dF~SQIfSLg~cP~~dWlav-G--Mens~vevlh~skp~k 626 (705)
T KOG0639|consen 557 IDISKDGTKLWTGGLDNTVRCWDLREG------RQLQQH-DFSSQIFSLGYCPTGDWLAV-G--MENSNVEVLHTSKPEK 626 (705)
T ss_pred EEecCCCceeecCCCccceeehhhhhh------hhhhhh-hhhhhheecccCCCccceee-e--cccCcEEEEecCCccc
Confidence 999999999999999999999999987 333222 23567999999999976555 3 6889998888776555
Q ss_pred eEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEc
Q psy4876 504 LDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583 (609)
Q Consensus 504 ~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl 583 (609)
...-.+.+-|.++.|.+.|+++++.. .|+-+..|..+-|..+...+ ....|+++.+|-|.++|+||+.|....||.+
T Consensus 627 yqlhlheScVLSlKFa~cGkwfvStG--kDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 627 YQLHLHESCVLSLKFAYCGKWFVSTG--KDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred eeecccccEEEEEEecccCceeeecC--chhhhhhccCccccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 55555667899999999999999853 89999999999999998875 5678999999999999999999999988876
No 91
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.92 E-value=4.7e-22 Score=203.24 Aligned_cols=272 Identities=15% Similarity=0.174 Sum_probs=202.7
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEE-EEEeCCCeEE
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYML-GVGTSLGTVQ 360 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~L-asgs~dg~I~ 360 (609)
+++.+.|+.|++||..+ +.... .+.+...+.+++|+|+|..+ ++++.++.|+
T Consensus 4 ~~s~~~d~~v~~~d~~t-------------------------~~~~~--~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~ 56 (300)
T TIGR03866 4 YVSNEKDNTISVIDTAT-------------------------LEVTR--TFPVGQRPRGITLSKDGKLLYVCASDSDTIQ 56 (300)
T ss_pred EEEecCCCEEEEEECCC-------------------------CceEE--EEECCCCCCceEECCCCCEEEEEECCCCeEE
Confidence 45678899999999987 54333 33333447789999999876 5667889999
Q ss_pred EEeCCCCeeEEEecCCCCceEEEEe--cCCEEEE-EecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe
Q psy4876 361 LWDVSAKKKCRTMDGHDVRVGALAW--NTYILSS-GSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGG 437 (609)
Q Consensus 361 iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~s-gs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs 437 (609)
+||..+++.+..+..+.. +..++| +++.+++ ++.++.|.+||+++. ..+..+. +...+.+++|+|+|.++++++
T Consensus 57 ~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~-~~~~~~~-~~~~~~~~~~~~dg~~l~~~~ 133 (300)
T TIGR03866 57 VIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETR-KVLAEIP-VGVEPEGMAVSPDGKIVVNTS 133 (300)
T ss_pred EEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCC-eEEeEee-CCCCcceEEECCCCCEEEEEe
Confidence 999999888877765443 456777 4565654 456899999999875 3455454 334578899999999999988
Q ss_pred CCC-cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC------
Q psy4876 438 NDN-LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK------ 510 (609)
Q Consensus 438 ~Dg-~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~------ 510 (609)
.++ .+.+||..++ .....+. ....+.+++|+|++..+++++ ..++.|++||+.+++++..+...
T Consensus 134 ~~~~~~~~~d~~~~------~~~~~~~-~~~~~~~~~~s~dg~~l~~~~--~~~~~v~i~d~~~~~~~~~~~~~~~~~~~ 204 (300)
T TIGR03866 134 ETTNMAHFIDTKTY------EIVDNVL-VDQRPRFAEFTADGKELWVSS--EIGGTVSVIDVATRKVIKKITFEIPGVHP 204 (300)
T ss_pred cCCCeEEEEeCCCC------eEEEEEE-cCCCccEEEECCCCCEEEEEc--CCCCEEEEEEcCcceeeeeeeeccccccc
Confidence 765 5778898776 3333332 223457899999997776654 36899999999999887766422
Q ss_pred --CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEE-ECCCCEEEEEcCCCc
Q psy4876 511 --SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSA-GADETLRLWKIFEKV 587 (609)
Q Consensus 511 --~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~-s~Dg~I~iWdl~~~~ 587 (609)
.....++|+++++.++++.+ .++.|.+||..+++.+..+. +...+.+++|+|+|++|+++ +.++.|++||+.+++
T Consensus 205 ~~~~~~~i~~s~dg~~~~~~~~-~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 205 EAVQPVGIKLTKDGKTAFVALG-PANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK 282 (300)
T ss_pred ccCCccceEECCCCCEEEEEcC-CCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence 13457899999999776543 56789999999888776653 44578999999999999886 468999999999988
Q ss_pred cchhhhh
Q psy4876 588 KSKKKEI 594 (609)
Q Consensus 588 ~~~k~~~ 594 (609)
.....+.
T Consensus 283 ~~~~~~~ 289 (300)
T TIGR03866 283 VIKSIKV 289 (300)
T ss_pred EEEEEEc
Confidence 6655444
No 92
>KOG0288|consensus
Probab=99.92 E-value=8.2e-25 Score=216.91 Aligned_cols=248 Identities=19% Similarity=0.288 Sum_probs=214.4
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCe--eEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCe
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK--KCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~--~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
|.+.|..+.|-++...|++|+.|..|++|++...+ .+.++.+..+.|+.+.|+ ++.+++++.|+.+++|++... .
T Consensus 174 h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~-r 252 (459)
T KOG0288|consen 174 HEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSL-R 252 (459)
T ss_pred cccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccch-h
Confidence 88999999999999999999999999999998766 778888999999999994 789999999999999999987 5
Q ss_pred eEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 410 KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
...++.+|++.|+++.|......+++|+.|.+|++||+... .+..++. ....+.+|+.. ...+++| -.
T Consensus 253 ~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~------~C~kt~l-~~S~cnDI~~~---~~~~~Sg--H~ 320 (459)
T KOG0288|consen 253 LRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKA------YCSKTVL-PGSQCNDIVCS---ISDVISG--HF 320 (459)
T ss_pred hhhhhcccccceeeehhhccccceeeccccchhhhhhhhhh------heecccc-ccccccceEec---ceeeeec--cc
Confidence 78899999999999999987777999999999999999986 4554443 23345555554 2456666 48
Q ss_pred CCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC----CCCEEEEEEeCC
Q psy4876 490 DRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH----SARVLNLAMSPD 565 (609)
Q Consensus 490 Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h----~~~V~~l~~spd 565 (609)
|++|++||+++..+..++..++.|+++..+.++..+++++ .|.++.++|+++.+....+.+. ....+.+.|||+
T Consensus 321 DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsss--RDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd 398 (459)
T KOG0288|consen 321 DKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSS--RDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPD 398 (459)
T ss_pred ccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeec--CCCceeeeecccccEEEEeeccccccccccceeEECCC
Confidence 9999999999999999999999999999999999999964 8999999999998887776532 234889999999
Q ss_pred CCEEEEEECCCCEEEEEcCCCccchhhhhhc
Q psy4876 566 ETTVLSAGADETLRLWKIFEKVKSKKKEIKN 596 (609)
Q Consensus 566 g~~L~s~s~Dg~I~iWdl~~~~~~~k~~~~~ 596 (609)
+.|+++||.||.|+||++++++.+++.....
T Consensus 399 ~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~ 429 (459)
T KOG0288|consen 399 GSYVAAGSADGSVYIWSVFTGKLEKVLSLST 429 (459)
T ss_pred CceeeeccCCCcEEEEEccCceEEEEeccCC
Confidence 9999999999999999999999887766543
No 93
>KOG0268|consensus
Probab=99.92 E-value=2.4e-24 Score=210.40 Aligned_cols=274 Identities=17% Similarity=0.231 Sum_probs=212.6
Q ss_pred eeEEEEEecCCC---eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 270 YYLNLIDWSHFN---VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 270 ~~v~~l~wsp~~---lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
..|.||+=+|.. +++|+.||.|+|||+.. . .++..+. |.+.|..+++..
T Consensus 67 dGV~~lakhp~~ls~~aSGs~DG~VkiWnlsq-------------------------R--~~~~~f~AH~G~V~Gi~v~~ 119 (433)
T KOG0268|consen 67 DGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQ-------------------------R--ECIRTFKAHEGLVRGICVTQ 119 (433)
T ss_pred cccchhhcCcchhhhhhccccCceEEEEehhh-------------------------h--hhhheeecccCceeeEEecc
Confidence 348889999874 77799999999999976 3 3455666 999999999987
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEE
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCG 423 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 423 (609)
..+++++.|.+|+.|-++. ..++++.+ ...+..|.- .+..+++++. .|.|||..-. .++..+.-....|.+
T Consensus 120 --~~~~tvgdDKtvK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~-~Pv~smswG~Dti~s 192 (433)
T KOG0268|consen 120 --TSFFTVGDDKTVKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRD-NPVSSMSWGADSISS 192 (433)
T ss_pred --cceEEecCCcceeeeeccC-Ccceeeec-cccccccccccccccccccCc--eeeecccccC-CccceeecCCCceeE
Confidence 6777889999999999875 35555543 334444443 3567777775 5999999765 478888877889999
Q ss_pred EEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC-
Q psy4876 424 LKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG- 501 (609)
Q Consensus 424 l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~- 501 (609)
+.|+| ....|++|+.|+.|.+||++++ .+++.+.. .-.-..|+|+|. ...+++| ++|..++.||++.-
T Consensus 193 vkfNpvETsILas~~sDrsIvLyD~R~~------~Pl~KVi~-~mRTN~IswnPe-afnF~~a--~ED~nlY~~DmR~l~ 262 (433)
T KOG0268|consen 193 VKFNPVETSILASCASDRSIVLYDLRQA------SPLKKVIL-TMRTNTICWNPE-AFNFVAA--NEDHNLYTYDMRNLS 262 (433)
T ss_pred EecCCCcchheeeeccCCceEEEecccC------Cccceeee-eccccceecCcc-ccceeec--cccccceehhhhhhc
Confidence 99999 4457888889999999999998 56655532 233478999994 4666665 59999999999854
Q ss_pred ceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC-CCCCEEEEEEeCCCCEEEEEECCCCEE
Q psy4876 502 ACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG-HSARVLNLAMSPDETTVLSAGADETLR 579 (609)
Q Consensus 502 ~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~L~s~s~Dg~I~ 579 (609)
.++.....+ +.|.++.|+|.|+++++ |+-|.+|+||.+..+..-..+.. -...|.|+.||-|.+++++|+.|+.||
T Consensus 263 ~p~~v~~dhvsAV~dVdfsptG~Efvs--gsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvR 340 (433)
T KOG0268|consen 263 RPLNVHKDHVSAVMDVDFSPTGQEFVS--GSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVR 340 (433)
T ss_pred ccchhhcccceeEEEeccCCCcchhcc--ccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCccee
Confidence 345555444 68999999999999999 55899999999987755433311 124699999999999999999999999
Q ss_pred EEEcCCCccc
Q psy4876 580 LWKIFEKVKS 589 (609)
Q Consensus 580 iWdl~~~~~~ 589 (609)
+|.-...++.
T Consensus 341 lWka~Asekl 350 (433)
T KOG0268|consen 341 LWKAKASEKL 350 (433)
T ss_pred eeecchhhhc
Confidence 9998766554
No 94
>KOG1539|consensus
Probab=99.92 E-value=2.9e-23 Score=221.31 Aligned_cols=322 Identities=18% Similarity=0.254 Sum_probs=245.1
Q ss_pred hcCCCCCCceEEeecCCCCCCC---CCccchhhhhhhccccCCccceeeeeeeecccchhhhhhhhhhHHhhhhhhheee
Q psy4876 146 VHGKDIQKSRVLAFQNKAPPPP---DGYQNSLKVALNSAITSSPEMKIWKISVHQNVKSVKLCQNLFMERIFKSLEYLLF 222 (609)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~e~~~~~~~~~~~ 222 (609)
+++..++.+|+|+++++|..|| ..|......+. +++.|+..+.+++.++.++++|.+..-
T Consensus 316 vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~il----sa~~Drt~r~fs~~~e~~~~~l~~~~~------------- 378 (910)
T KOG1539|consen 316 VFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFIL----SAKQDRTLRSFSVISESQSQELGQLHN------------- 378 (910)
T ss_pred EeeCCCCcchheeeccCCCCCchheeeeccCcEEEE----ecccCcchhhhhhhHHHHhHhhccccc-------------
Confidence 3444445689999999999999 55767666555 899999999999999999988877322
Q ss_pred eccCCcchhhhhhccCCCCCCCCCCCCccccCCCccccccCCccCCceeEEEEEecCCCeEEEEc-CCeEEEEeCCCCCC
Q psy4876 223 KIKPLPHLMAIKILSNTSKTPMGSKPTSRYIPLTADRILDAPEIQNDYYLNLIDWSHFNVLAVAL-GGSIYLWNGESDSN 301 (609)
Q Consensus 223 ~~~p~p~~~~~~~~~~~~~~~~~~~~~~r~i~~~p~~il~ap~~~~~~~v~~l~wsp~~lla~s~-dg~I~iWd~~~~~~ 301 (609)
.+ -..+.... .......+|...+..-..+...+ +|++++.. +..++.|+......
T Consensus 379 --------------~~-~~kk~~~~-~~~~~k~p~i~~fa~~~~RE~~W--------~Nv~~~h~~~~~~~tW~~~n~~~ 434 (910)
T KOG1539|consen 379 --------------KK-RAKKVNVF-STEKLKLPPIVEFAFENAREKEW--------DNVITAHKGKRSAYTWNFRNKTS 434 (910)
T ss_pred --------------cc-cccccccc-chhhhcCCcceeeecccchhhhh--------cceeEEecCcceEEEEeccCccc
Confidence 00 00000000 00011112222222222222222 35666554 46889999987211
Q ss_pred CceEEecCCccccccccccccccceeeeee---ec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEe---c
Q psy4876 302 SKYIICQSPLVQELTSKCIQDNRAIDHLMD---LE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTM---D 374 (609)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l---~ 374 (609)
| +.... +. ....+++|+.++.|++.+.|+..|.|.+|++++|-....+ .
T Consensus 435 ----------------------G--~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ 490 (910)
T KOG1539|consen 435 ----------------------G--RHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSP 490 (910)
T ss_pred ----------------------c--cEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCc
Confidence 1 11111 11 4578999999999999999999999999999999888888 4
Q ss_pred CCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCC
Q psy4876 375 GHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQH 452 (609)
Q Consensus 375 ~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~ 452 (609)
.|...|+.++.| +..+++++.+|.+.+||+.... .+..+. -...+.++..+.....+|.+..|-.|+++|..+.
T Consensus 491 ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~-l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~-- 566 (910)
T KOG1539|consen 491 AHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKV-LKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTR-- 566 (910)
T ss_pred cccCceeEEEecCCCceEEEccCcceEEEEecCCcc-eeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhh--
Confidence 899999999997 4789999999999999999863 444444 4567888999998889999999999999999987
Q ss_pred CCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecC
Q psy4876 453 TFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFA 532 (609)
Q Consensus 453 ~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~ 532 (609)
+.++.+.+|.+.|++++|+|||++++.++ .|++|++||+.++.++..+....++.++.|+|+|.+|++++. +
T Consensus 567 ----kvvR~f~gh~nritd~~FS~DgrWlisas---mD~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hv-d 638 (910)
T KOG1539|consen 567 ----KVVREFWGHGNRITDMTFSPDGRWLISAS---MDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHV-D 638 (910)
T ss_pred ----hhhHHhhccccceeeeEeCCCCcEEEEee---cCCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEe-c
Confidence 78899999999999999999998777764 899999999999999999999999999999999999999984 4
Q ss_pred CCeEEEEECCCC
Q psy4876 533 QNQLIIWKYPSL 544 (609)
Q Consensus 533 dg~I~Iwd~~~~ 544 (609)
.+-|++|--.+.
T Consensus 639 ~~gIylWsNksl 650 (910)
T KOG1539|consen 639 QNGIYLWSNKSL 650 (910)
T ss_pred CceEEEEEchhH
Confidence 588999976543
No 95
>KOG0268|consensus
Probab=99.92 E-value=2e-24 Score=210.91 Aligned_cols=243 Identities=16% Similarity=0.325 Sum_probs=214.2
Q ss_pred eec-CCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCC
Q psy4876 331 DLE-GNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRD 408 (609)
Q Consensus 331 ~~~-h~~~V~~v~~spdg-~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~ 408 (609)
.+. |.+.|.|++=+|.. ..+|+|+.||.|+|||+....+..++..|.+.|..|+++...+++++.|.+|+.|-+...
T Consensus 61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~~- 139 (433)
T KOG0268|consen 61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDGP- 139 (433)
T ss_pred hccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeeccCC-
Confidence 344 89999999999987 889999999999999999999999999999999999998888999999999999998863
Q ss_pred eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 409 HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 409 ~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs 488 (609)
...++. ....+.+|.-+..+..+|+||. .|.|||.... .|+..+.-....|.++.|+|-...+|++++
T Consensus 140 -p~~til-g~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~------~Pv~smswG~Dti~svkfNpvETsILas~~-- 207 (433)
T KOG0268|consen 140 -PLHTIL-GKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRD------NPVSSMSWGADSISSVKFNPVETSILASCA-- 207 (433)
T ss_pred -cceeee-ccccccccccccccccccccCc--eeeecccccC------CccceeecCCCceeEEecCCCcchheeeec--
Confidence 555554 3456788888888889999986 5999999876 788889888889999999999989999885
Q ss_pred CCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC-ceEEEEeCCCCCEEEEEEeCCCC
Q psy4876 489 ADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL-VKVAELHGHSARVLNLAMSPDET 567 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~-~~~~~l~~h~~~V~~l~~spdg~ 567 (609)
.|+.|.+||++++.+++.+.....-..|+|+|.+-.+++ +.+|..++.||++.. .++....+|.+.|.++.|||.|+
T Consensus 208 sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~--a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~ 285 (433)
T KOG0268|consen 208 SDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVA--ANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQ 285 (433)
T ss_pred cCCceEEEecccCCccceeeeeccccceecCccccceee--ccccccceehhhhhhcccchhhcccceeEEEeccCCCcc
Confidence 899999999999999999988888899999995555555 669999999999865 45667789999999999999999
Q ss_pred EEEEEECCCCEEEEEcCCCcc
Q psy4876 568 TVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 568 ~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
-+++||.|.+||||.+..+..
T Consensus 286 EfvsgsyDksIRIf~~~~~~S 306 (433)
T KOG0268|consen 286 EFVSGSYDKSIRIFPVNHGHS 306 (433)
T ss_pred hhccccccceEEEeecCCCcc
Confidence 999999999999999987653
No 96
>KOG0305|consensus
Probab=99.92 E-value=3.4e-23 Score=217.21 Aligned_cols=238 Identities=22% Similarity=0.392 Sum_probs=201.1
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccC
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQE 346 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spd 346 (609)
..+|.++.|+++| ++++..+|.|.|||... ..........|...|-+++|.
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~-------------------------~k~~~~~~~~h~~rvg~laW~-- 269 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKE-------------------------QKKTRTLRGSHASRVGSLAWN-- 269 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhh-------------------------ccccccccCCcCceeEEEecc--
Confidence 5679999999986 55577799999999977 222222222278999999998
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEE-ecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRT-MDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCG 423 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~-l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 423 (609)
+..+.+|+.+|.|..+|+...+.... +.+|...|..+.| ++.+|++|+.|+.+.|||.... .+...+..|...|..
T Consensus 270 ~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~-~p~~~~~~H~aAVKA 348 (484)
T KOG0305|consen 270 SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP-EPKFTFTEHTAAVKA 348 (484)
T ss_pred CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCc-cccEEEeccceeeeE
Confidence 67899999999999999988765554 8899999999999 6899999999999999999665 577888899999999
Q ss_pred EEEcc-CCCEEEEEe--CCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC
Q psy4876 424 LKWSP-DGRYLASGG--NDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 424 l~~sp-dg~~lasgs--~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t 500 (609)
++|+| ...+||+|+ .|++|++||..++ ..+..+. -...|..|.|++..+.++++- |..+..|.||+..+
T Consensus 349 ~awcP~q~~lLAsGGGs~D~~i~fwn~~~g------~~i~~vd-tgsQVcsL~Wsk~~kEi~sth-G~s~n~i~lw~~ps 420 (484)
T KOG0305|consen 349 LAWCPWQSGLLATGGGSADRCIKFWNTNTG------ARIDSVD-TGSQVCSLIWSKKYKELLSTH-GYSENQITLWKYPS 420 (484)
T ss_pred eeeCCCccCceEEcCCCcccEEEEEEcCCC------cEecccc-cCCceeeEEEcCCCCEEEEec-CCCCCcEEEEeccc
Confidence 99999 667899875 5999999999988 5665554 457899999999887777766 47888999999999
Q ss_pred CceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC
Q psy4876 501 GACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL 544 (609)
Q Consensus 501 ~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~ 544 (609)
.+.+..+..| ..|..++++|||..+++++ .|.++++|++-..
T Consensus 421 ~~~~~~l~gH~~RVl~la~SPdg~~i~t~a--~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 421 MKLVAELLGHTSRVLYLALSPDGETIVTGA--ADETLRFWNLFDE 463 (484)
T ss_pred cceeeeecCCcceeEEEEECCCCCEEEEec--ccCcEEeccccCC
Confidence 8888888776 4899999999999999954 7999999998654
No 97
>KOG0283|consensus
Probab=99.91 E-value=2.8e-23 Score=223.02 Aligned_cols=258 Identities=17% Similarity=0.285 Sum_probs=194.4
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCC------C---ceE----------EecCC---ccccc------ccc
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSN------S---KYI----------ICQSP---LVQEL------TSK 318 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~------~---~~~----------~~~~~---~~~~~------~~~ 318 (609)
+-.|.++.||+|| ++++|.|+.|+||.+...+- . .+. ..... .+... ...
T Consensus 267 ~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~ 346 (712)
T KOG0283|consen 267 KGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSP 346 (712)
T ss_pred CCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCc
Confidence 3358999999998 55689999999999876100 0 000 00000 00000 000
Q ss_pred ccc-----cccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe---cCCE
Q psy4876 319 CIQ-----DNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW---NTYI 389 (609)
Q Consensus 319 ~~~-----~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~---~~~~ 389 (609)
+.. -.-...+++.+. |.+.|.+++|+.++ +|++++.|.+|+||++...++++.|. |..-|+|++| |.++
T Consensus 347 ~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDry 424 (712)
T KOG0283|consen 347 CVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRY 424 (712)
T ss_pred cccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCc
Confidence 000 001123555666 99999999999765 88899999999999999999999998 9999999999 4689
Q ss_pred EEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEee--c----
Q psy4876 390 LSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL--S---- 463 (609)
Q Consensus 390 L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~--~---- 463 (609)
|++|+-||.|+||++... .+.....-..-|++++|.|||++.++|+.+|.+++|+....+ ....+ .
T Consensus 425 FiSGSLD~KvRiWsI~d~--~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk------~~~~~~I~~~~~ 496 (712)
T KOG0283|consen 425 FISGSLDGKVRLWSISDK--KVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLK------LVSDFHIRLHNK 496 (712)
T ss_pred EeecccccceEEeecCcC--eeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCe------EEEeeeEeeccC
Confidence 999999999999999875 455555566899999999999999999999999999998763 22211 1
Q ss_pred ---CCcccEEEEEEcCCCCc-EEEEEeccCCCeEEEEECCCCceeEEEcCCC---CeEEEEEcCCCCeEEEEEecCCCeE
Q psy4876 464 ---RHQAAVKAIAWCPWSPN-VLASGGGTADRHIYFWNVSSGACLDSIDTKS---QVCALLWNSDYKELVSAHGFAQNQL 536 (609)
Q Consensus 464 ---~h~~~V~~l~~sp~~~~-llasggGs~Dg~I~iwd~~t~~~~~~~~~~~---~v~sl~~s~~g~~l~~~sG~~dg~I 536 (609)
.|. .|+.+.|.|.... +|++ +.|..|+|||.++..++..+.+.. .-....|+.||++|++++ +|..|
T Consensus 497 Kk~~~~-rITG~Q~~p~~~~~vLVT---SnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s--eDs~V 570 (712)
T KOG0283|consen 497 KKKQGK-RITGLQFFPGDPDEVLVT---SNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSAS--EDSWV 570 (712)
T ss_pred ccccCc-eeeeeEecCCCCCeEEEe---cCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEee--cCceE
Confidence 123 7999999987665 6666 489999999999888888887532 345678888999999954 99999
Q ss_pred EEEECC
Q psy4876 537 IIWKYP 542 (609)
Q Consensus 537 ~Iwd~~ 542 (609)
+||++.
T Consensus 571 YiW~~~ 576 (712)
T KOG0283|consen 571 YIWKND 576 (712)
T ss_pred EEEeCC
Confidence 999974
No 98
>KOG0308|consensus
Probab=99.91 E-value=6.9e-24 Score=220.62 Aligned_cols=274 Identities=21% Similarity=0.332 Sum_probs=230.2
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEE
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQ 360 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~ 360 (609)
++++|.||.|++|++...... .....+..++ |.+.|.+++...+|+.|++++.|-+|+
T Consensus 40 LfTgGRDg~i~~W~~~~d~~~---------------------~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK 98 (735)
T KOG0308|consen 40 LFTGGRDGIIRLWSVTQDSNE---------------------PSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVK 98 (735)
T ss_pred EEecCCCceEEEeccccccCC---------------------cccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEE
Confidence 889999999999999763211 1112355667 999999999999999999999999999
Q ss_pred EEeCCCC--eeEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCe---------eEEEEc-cCCCCeEEEE
Q psy4876 361 LWDVSAK--KKCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDH---------KVALLQ-NHTQEVCGLK 425 (609)
Q Consensus 361 iwd~~~~--~~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~---------~~~~~~-~h~~~V~~l~ 425 (609)
+|+...+ -+..++..|...|.|++. +..++++|+-|+.|.+||+.++.. ....+. ++...|.+++
T Consensus 99 ~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA 178 (735)
T KOG0308|consen 99 VWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLA 178 (735)
T ss_pred EeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeee
Confidence 9999887 577889999999999999 678999999999999999997621 122233 7889999999
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD 505 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~ 505 (609)
.++.|..|++|+..+.|++||.++. +.+..+.+|...|.++..++||..++.+ +.||+|++||+....|+.
T Consensus 179 ~N~t~t~ivsGgtek~lr~wDprt~------~kimkLrGHTdNVr~ll~~dDGt~~ls~---sSDgtIrlWdLgqQrCl~ 249 (735)
T KOG0308|consen 179 MNQTGTIIVSGGTEKDLRLWDPRTC------KKIMKLRGHTDNVRVLLVNDDGTRLLSA---SSDGTIRLWDLGQQRCLA 249 (735)
T ss_pred cCCcceEEEecCcccceEEeccccc------cceeeeeccccceEEEEEcCCCCeEeec---CCCceEEeeeccccceee
Confidence 9999999999999999999999998 7788899999999999999999766654 479999999999999999
Q ss_pred EEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 506 SIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 506 ~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
++..| ..|+++..+++-..+++ |+.|+.|..=|+.+......+.....+|..+..+.+.+-+-+++.|+.|+-|...
T Consensus 250 T~~vH~e~VWaL~~~~sf~~vYs--G~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~ 327 (735)
T KOG0308|consen 250 TYIVHKEGVWALQSSPSFTHVYS--GGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLE 327 (735)
T ss_pred eEEeccCceEEEeeCCCcceEEe--cCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCc
Confidence 98765 47999999999999998 7799999999998865444444566778888887666666778889999999876
Q ss_pred CCc
Q psy4876 585 EKV 587 (609)
Q Consensus 585 ~~~ 587 (609)
...
T Consensus 328 ~~~ 330 (735)
T KOG0308|consen 328 PDI 330 (735)
T ss_pred ccc
Confidence 543
No 99
>KOG1036|consensus
Probab=99.91 E-value=4.8e-22 Score=191.17 Aligned_cols=276 Identities=15% Similarity=0.196 Sum_probs=214.9
Q ss_pred eeEEEEEecCC--CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 270 YYLNLIDWSHF--NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 270 ~~v~~l~wsp~--~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
.+|..|.|+|. .+|+++.||++++|++.. . .....+.|..++.+++|.+ .
T Consensus 14 d~IS~v~f~~~~~~LLvssWDgslrlYdv~~-------------------------~--~l~~~~~~~~plL~c~F~d-~ 65 (323)
T KOG1036|consen 14 DGISSVKFSPSSSDLLVSSWDGSLRLYDVPA-------------------------N--SLKLKFKHGAPLLDCAFAD-E 65 (323)
T ss_pred hceeeEEEcCcCCcEEEEeccCcEEEEeccc-------------------------h--hhhhheecCCceeeeeccC-C
Confidence 46888999975 389999999999999987 3 3444556899999999987 4
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
..+++|+.||.|+++|+.++... .+..|...|.||.+. ...+++|+.|++|++||.+.. .....+.. ...|.++.
T Consensus 66 ~~~~~G~~dg~vr~~Dln~~~~~-~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~-~~~~~~d~-~kkVy~~~ 142 (323)
T KOG1036|consen 66 STIVTGGLDGQVRRYDLNTGNED-QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNK-VVVGTFDQ-GKKVYCMD 142 (323)
T ss_pred ceEEEeccCceEEEEEecCCcce-eeccCCCceEEEEeeccCCeEEEcccCccEEEEecccc-cccccccc-CceEEEEe
Confidence 67889999999999999987654 455699999999996 688999999999999999974 34444433 34788777
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc---
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA--- 502 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~--- 502 (609)
.+ |+.|++|+.|..|.+||+++..... ...-..-.-.+.|+++.|.+.-++++ +.||.|.+=.++...
T Consensus 143 v~--g~~LvVg~~~r~v~iyDLRn~~~~~----q~reS~lkyqtR~v~~~pn~eGy~~s---SieGRVavE~~d~s~~~~ 213 (323)
T KOG1036|consen 143 VS--GNRLVVGTSDRKVLIYDLRNLDEPF----QRRESSLKYQTRCVALVPNGEGYVVS---SIEGRVAVEYFDDSEEAQ 213 (323)
T ss_pred cc--CCEEEEeecCceEEEEEcccccchh----hhccccceeEEEEEEEecCCCceEEE---eecceEEEEccCCchHHh
Confidence 65 7789999999999999999874321 11112234568999999976655554 489999987776552
Q ss_pred -eeEEEcCC----------CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEE
Q psy4876 503 -CLDSIDTK----------SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLS 571 (609)
Q Consensus 503 -~~~~~~~~----------~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s 571 (609)
....|..| .+|.+|+|+|-...+++ |+.||.|.+||..+.+.+..+......|..++|+.||..||.
T Consensus 214 skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaT--gGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAi 291 (323)
T KOG1036|consen 214 SKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFAT--GGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAI 291 (323)
T ss_pred hhceeEEeeecccCCceEEEEeceeEeccccceEEe--cCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEE
Confidence 22233322 26899999999999999 668999999999999999999888888999999999999999
Q ss_pred EEC-----CCC-------EEEEEcCCCc
Q psy4876 572 AGA-----DET-------LRLWKIFEKV 587 (609)
Q Consensus 572 ~s~-----Dg~-------I~iWdl~~~~ 587 (609)
|+. ... |.|.++...+
T Consensus 292 a~sy~ye~~~~~~~~~~~i~I~~l~d~e 319 (323)
T KOG1036|consen 292 ASSYQYERADTPTHERNAIFIRDLTDYE 319 (323)
T ss_pred EechhhhcCCCCCCCCCceEEEeccccc
Confidence 874 223 6676666544
No 100
>KOG0299|consensus
Probab=99.91 E-value=9.7e-23 Score=204.90 Aligned_cols=293 Identities=19% Similarity=0.263 Sum_probs=231.3
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccC
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQE 346 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spd 346 (609)
...|.+|+.++++ ++.++.+++|.=|++.++....+++--. .+... .+.......-.|...|.+++.++|
T Consensus 142 ~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~----ev~k~----~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 142 QLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERD----EVLKS----HGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred cCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccc----hhhhh----ccCCCCcccccccceeEEEEEcCC
Confidence 3457889999985 8889999999999999865443332110 00000 011111111138889999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGL 424 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 424 (609)
|+|||+|+.|..|.||+.++.+.+..+.+|.+.|.+++| ..+.|++++.|..|++|++... ..+.++.+|.+.|.+|
T Consensus 214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~-s~vetlyGHqd~v~~I 292 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL-SYVETLYGHQDGVLGI 292 (479)
T ss_pred CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHh-HHHHHHhCCccceeee
Confidence 999999999999999999999999999999999999999 4688999999999999999986 4788899999999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCcee
Q psy4876 425 KWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 425 ~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~ 504 (609)
....-++.+.+|+.|+++++|++.. .....+.+|.+.+.|++|-.+. -+++| +.+|.|.+|++.+.+++
T Consensus 293 daL~reR~vtVGgrDrT~rlwKi~e-------esqlifrg~~~sidcv~~In~~--HfvsG--SdnG~IaLWs~~KKkpl 361 (479)
T KOG0299|consen 293 DALSRERCVTVGGRDRTVRLWKIPE-------ESQLIFRGGEGSIDCVAFINDE--HFVSG--SDNGSIALWSLLKKKPL 361 (479)
T ss_pred chhcccceEEeccccceeEEEeccc-------cceeeeeCCCCCeeeEEEeccc--ceeec--cCCceEEEeeecccCce
Confidence 9988888888888999999999954 3445677889999999998764 45665 59999999999998887
Q ss_pred EEEcC-------------CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC----ceEEEEeCCCCCEEEEEEeCCCC
Q psy4876 505 DSIDT-------------KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL----VKVAELHGHSARVLNLAMSPDET 567 (609)
Q Consensus 505 ~~~~~-------------~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~----~~~~~l~~h~~~V~~l~~spdg~ 567 (609)
.+... ...|++++..+....+++ |+.+|.|++|.+..+ ..+..+. -.+.|+.++|+++|+
T Consensus 362 f~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~as--GS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk 438 (479)
T KOG0299|consen 362 FTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLAS--GSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGK 438 (479)
T ss_pred eEeeccccccCCccccccccceeeeEecccCceEEe--cCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCC
Confidence 66531 126889999999999988 668999999999776 4455554 568899999999999
Q ss_pred EEEEE-ECCCCEEEEEcC
Q psy4876 568 TVLSA-GADETLRLWKIF 584 (609)
Q Consensus 568 ~L~s~-s~Dg~I~iWdl~ 584 (609)
.|++| +....+-=|-+.
T Consensus 439 ~ivagiGkEhRlGRW~~~ 456 (479)
T KOG0299|consen 439 RIVAGIGKEHRLGRWWCL 456 (479)
T ss_pred EEEEecccccccceeeEe
Confidence 66655 445555455443
No 101
>KOG1274|consensus
Probab=99.91 E-value=9e-23 Score=219.93 Aligned_cols=243 Identities=16% Similarity=0.289 Sum_probs=208.8
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC-eeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK-KKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~-~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
|....+.|+|.|+|.+|++++.||.|++|+.... +.-.++..+...|.+++-....|++|+.+++|.+|.+..++ .-.
T Consensus 12 ht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~-~~~ 90 (933)
T KOG1274|consen 12 HTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGE-EDT 90 (933)
T ss_pred ccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCC-ccc
Confidence 7788999999999999999999999999998766 44455555888999999998999999999999999998874 333
Q ss_pred EEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCe
Q psy4876 413 LLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRH 492 (609)
Q Consensus 413 ~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~ 492 (609)
.+...+-++.+++|+.+|+++|.|+.|-.|++.++... .....+.+|.++|.+|.|+|.+. +||+. +.||.
T Consensus 91 iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~------s~~~~lrgh~apVl~l~~~p~~~-fLAvs--s~dG~ 161 (933)
T KOG1274|consen 91 ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDS------SQEKVLRGHDAPVLQLSYDPKGN-FLAVS--SCDGK 161 (933)
T ss_pred eeeeeeccceEEEEecCCcEEEeecCceeEEEEecccc------chheeecccCCceeeeeEcCCCC-EEEEE--ecCce
Confidence 45556778999999999999999999999999999887 67788999999999999999885 55554 36999
Q ss_pred EEEEECCCCceeEEEcC---------CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC--CCCCEEEEE
Q psy4876 493 IYFWNVSSGACLDSIDT---------KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG--HSARVLNLA 561 (609)
Q Consensus 493 I~iwd~~t~~~~~~~~~---------~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~--h~~~V~~l~ 561 (609)
|++||+.++.+..++.. ...++.++|+|++..+++.. .|+.|.+|+...++....+.. |...+.+++
T Consensus 162 v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~--~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~ 239 (933)
T KOG1274|consen 162 VQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPP--VDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQ 239 (933)
T ss_pred EEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeec--cCCeEEEEccCCceeheeecccccccceEEEE
Confidence 99999999988776642 23577899999987777754 799999999999999988864 445599999
Q ss_pred EeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 562 MSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 562 ~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
|+|+|+|||+++.||.|.|||+.+.+.
T Consensus 240 wsPnG~YiAAs~~~g~I~vWnv~t~~~ 266 (933)
T KOG1274|consen 240 WSPNGKYIAASTLDGQILVWNVDTHER 266 (933)
T ss_pred EcCCCcEEeeeccCCcEEEEecccchh
Confidence 999999999999999999999997443
No 102
>KOG1036|consensus
Probab=99.91 E-value=1.6e-22 Score=194.49 Aligned_cols=242 Identities=17% Similarity=0.247 Sum_probs=196.5
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
..+.|++|.|+|.+..|++++.||.+++||+........+. |..++.+++| +...+++|+.||.|+.+|+.++. ..
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~--~~ 88 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGN--ED 88 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCCceEEEeccCceEEEEEecCCc--ce
Confidence 57889999999999999999999999999999876655555 9999999999 67899999999999999999874 55
Q ss_pred EEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCe
Q psy4876 413 LLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRH 492 (609)
Q Consensus 413 ~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~ 492 (609)
.+..|...|.||..++....+++|+.|++|++||.+.. ..+..+.. ...|.++.... +.|++| +.|..
T Consensus 89 ~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~------~~~~~~d~-~kkVy~~~v~g---~~LvVg--~~~r~ 156 (323)
T KOG1036|consen 89 QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNK------VVVGTFDQ-GKKVYCMDVSG---NRLVVG--TSDRK 156 (323)
T ss_pred eeccCCCceEEEEeeccCCeEEEcccCccEEEEecccc------cccccccc-CceEEEEeccC---CEEEEe--ecCce
Confidence 66779999999999998888999999999999999964 34444433 34788887753 345554 37999
Q ss_pred EEEEECCCCceeEEEc---CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC----ceEEEEeCCC---------CC
Q psy4876 493 IYFWNVSSGACLDSID---TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL----VKVAELHGHS---------AR 556 (609)
Q Consensus 493 I~iwd~~t~~~~~~~~---~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~----~~~~~l~~h~---------~~ 556 (609)
+.+||+++........ ..-++.++++.|++.-.++ ++-||.|.+=.+... .+-..|+.|. -+
T Consensus 157 v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~--sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yP 234 (323)
T KOG1036|consen 157 VLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVV--SSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYP 234 (323)
T ss_pred EEEEEcccccchhhhccccceeEEEEEEEecCCCceEE--EeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEE
Confidence 9999999876554333 3458999999998777777 447999988766554 4455667774 26
Q ss_pred EEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhh
Q psy4876 557 VLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKK 592 (609)
Q Consensus 557 V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~ 592 (609)
|++|+|||-..+|+|||.||.|.+||+++.+..+..
T Consensus 235 VNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~ 270 (323)
T KOG1036|consen 235 VNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQL 270 (323)
T ss_pred eceeEeccccceEEecCCCceEEEccCcchhhhhhc
Confidence 999999999999999999999999999987765544
No 103
>KOG0647|consensus
Probab=99.91 E-value=1e-22 Score=194.92 Aligned_cols=242 Identities=22% Similarity=0.322 Sum_probs=193.4
Q ss_pred CCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCC-eeE-EEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCC
Q psy4876 334 GNENVCSVAWIQ-EGYMLGVGTSLGTVQLWDVSAK-KKC-RTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRD 408 (609)
Q Consensus 334 h~~~V~~v~~sp-dg~~Lasgs~dg~I~iwd~~~~-~~~-~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~ 408 (609)
.++.|.+++||| ...++++|+.||+||+|+++.. ..+ +....|.++|.+++| +|..+++|+.|+.+++||+.++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~- 104 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG- 104 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-
Confidence 678999999999 4577779999999999999873 322 445679999999999 6899999999999999999997
Q ss_pred eeEEEEccCCCCeEEEEEccCCC--EEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEe
Q psy4876 409 HKVALLQNHTQEVCGLKWSPDGR--YLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG 486 (609)
Q Consensus 409 ~~~~~~~~h~~~V~~l~~spdg~--~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg 486 (609)
.+..+..|.++|..+.|-+... .|++|+.|.+|+.||.+.. .++.++. -...+.++..-. -+++++
T Consensus 105 -Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~------~pv~t~~-LPeRvYa~Dv~~---pm~vVa- 172 (347)
T KOG0647|consen 105 -QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSS------NPVATLQ-LPERVYAADVLY---PMAVVA- 172 (347)
T ss_pred -CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCC------Ceeeeee-ccceeeehhccC---ceeEEE-
Confidence 4677788999999999988655 7999999999999999987 6777665 345566665432 355554
Q ss_pred ccCCCeEEEEECCCCceeEE-E--cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC--ceEEEEeCCCC------
Q psy4876 487 GTADRHIYFWNVSSGACLDS-I--DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL--VKVAELHGHSA------ 555 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t~~~~~~-~--~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~--~~~~~l~~h~~------ 555 (609)
..++.|.+|+++++..... + ....++.+++...+....+. |+-+|.+.|..+..+ +.-..|+.|..
T Consensus 173 -ta~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~al--GsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~ 249 (347)
T KOG0647|consen 173 -TAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFAL--GSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVND 249 (347)
T ss_pred -ecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEe--eeecceEEEEecCCCCccCceeEEEeccCCCCCC
Confidence 3799999999986653322 2 23458999999988887777 568999999998776 55556677752
Q ss_pred ---CEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchh
Q psy4876 556 ---RVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 556 ---~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
.|++|+|+|.-..|+|+|.||++.+||-....+.+.
T Consensus 250 ~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~ 288 (347)
T KOG0647|consen 250 DVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKT 288 (347)
T ss_pred ceEEecceEeecccceEEEecCCceEEEecchhhhhhhc
Confidence 478899999999999999999999999766554443
No 104
>KOG0300|consensus
Probab=99.91 E-value=8.3e-23 Score=196.18 Aligned_cols=264 Identities=19% Similarity=0.310 Sum_probs=224.7
Q ss_pred EEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy4876 284 AVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLW 362 (609)
Q Consensus 284 a~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iw 362 (609)
+++.|.+.+||.+++ +. ++.++. |.+.|.++.|++.+.++++++.|++..||
T Consensus 165 tASADhTA~iWs~Es-------------------------g~--CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW 217 (481)
T KOG0300|consen 165 TASADHTARIWSLES-------------------------GA--CLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIW 217 (481)
T ss_pred ecccccceeEEeecc-------------------------cc--ceeeecccccceeeEEeccccceEEEccCCcchHHH
Confidence 477899999999988 54 455666 99999999999999999999999999999
Q ss_pred eC------CC------------------------------C----eeEEEecCCCCceEEEEe--cCCEEEEEecCCeEE
Q psy4876 363 DV------SA------------------------------K----KKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIV 400 (609)
Q Consensus 363 d~------~~------------------------------~----~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~ 400 (609)
.. .. + ..+..+.+|.+.|.+..| .+..+++++.|.+..
T Consensus 218 ~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAn 297 (481)
T KOG0300|consen 218 KAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTAN 297 (481)
T ss_pred HHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccce
Confidence 62 11 0 123467789999999999 689999999999999
Q ss_pred EEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCc
Q psy4876 401 HHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPN 480 (609)
Q Consensus 401 iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 480 (609)
+||++++ ..+..+.+|..+.+.++-+|..+++++.+.|-+.++||.+.. ...+..|++|...|+++.|.-+.
T Consensus 298 lwDVEtg-e~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRea-----I~sV~VFQGHtdtVTS~vF~~dd-- 369 (481)
T KOG0300|consen 298 LWDVETG-EVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREA-----IQSVAVFQGHTDTVTSVVFNTDD-- 369 (481)
T ss_pred eeeeccC-ceeccccCcchhccccccCCcceEEEEeccCceeEeccchhh-----cceeeeecccccceeEEEEecCC--
Confidence 9999998 589999999999999999999999999999999999999854 26778899999999999999865
Q ss_pred EEEEEeccCCCeEEEEECCCC-ceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEE-----EeCCC
Q psy4876 481 VLASGGGTADRHIYFWNVSSG-ACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAE-----LHGHS 554 (609)
Q Consensus 481 llasggGs~Dg~I~iwd~~t~-~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~-----l~~h~ 554 (609)
-+++| +.|.+|++||+++. ..+.++...+.+..++.+..++.++.-+ ++.+|++||+... .+.. -++|.
T Consensus 370 ~vVSg--SDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPh--DNRqvRlfDlnG~-RlaRlPrtsRqgHr 444 (481)
T KOG0300|consen 370 RVVSG--SDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPH--DNRQVRLFDLNGN-RLARLPRTSRQGHR 444 (481)
T ss_pred ceeec--CCCceEEEeeeccccCcceeeecCCccceeEeecCCceEEecc--CCceEEEEecCCC-ccccCCcccccccc
Confidence 45554 69999999999864 5788999999999999999999999966 7889999998643 3332 35899
Q ss_pred CCEEEEEEeCCCC--EEEEEECCCCEEEEEcCCCc
Q psy4876 555 ARVLNLAMSPDET--TVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 555 ~~V~~l~~spdg~--~L~s~s~Dg~I~iWdl~~~~ 587 (609)
.-|.|++|..+.. -|+++|-|..+.=|++....
T Consensus 445 RMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 445 RMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred eeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 9999999986543 58899999999999987653
No 105
>KOG0278|consensus
Probab=99.91 E-value=6.3e-24 Score=198.08 Aligned_cols=245 Identities=20% Similarity=0.307 Sum_probs=219.6
Q ss_pred cCCCCeEEEEEcc---CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCC
Q psy4876 333 EGNENVCSVAWIQ---EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSR 407 (609)
Q Consensus 333 ~h~~~V~~v~~sp---dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~ 407 (609)
.|..+|..++|+| +|-+|++++.||.-.+-+-++|.-+.++.+|.+.|+....| ....++++.|-+-++||.-++
T Consensus 12 ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tg 91 (334)
T KOG0278|consen 12 GHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTG 91 (334)
T ss_pred CCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhh
Confidence 3899999999986 78999999999999998999999999999999999999985 456778888999999999988
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEec
Q psy4876 408 DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGG 487 (609)
Q Consensus 408 ~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggG 487 (609)
. .+..+. |..-|..++|+.|.++|++|+.+..++|||++..+ .+...+.+|.+.|..+.|+.....+|.+
T Consensus 92 d-elhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~-----App~E~~ghtg~Ir~v~wc~eD~~iLSS--- 161 (334)
T KOG0278|consen 92 D-ELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK-----APPKEISGHTGGIRTVLWCHEDKCILSS--- 161 (334)
T ss_pred h-hhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCC-----CCchhhcCCCCcceeEEEeccCceEEee---
Confidence 5 555554 88899999999999999999999999999999774 6778899999999999999987777765
Q ss_pred cCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCC
Q psy4876 488 TADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDET 567 (609)
Q Consensus 488 s~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~ 567 (609)
+.|++|++||.+++..++++...+.|.++.++++|.+|.++. .+.|.+||..+...++.+.. ...|.+.+++|+..
T Consensus 162 add~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~---gssV~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~ 237 (334)
T KOG0278|consen 162 ADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAY---GSSVKFWDAKSFGLLKSYKM-PCNVESASLHPKKE 237 (334)
T ss_pred ccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEec---CceeEEeccccccceeeccC-ccccccccccCCCc
Confidence 389999999999999999999999999999999999998875 57899999999999988753 35689999999999
Q ss_pred EEEEEECCCCEEEEEcCCCccchh
Q psy4876 568 TVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 568 ~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
.+++|+.|..++.||..+++....
T Consensus 238 ~fVaGged~~~~kfDy~TgeEi~~ 261 (334)
T KOG0278|consen 238 FFVAGGEDFKVYKFDYNTGEEIGS 261 (334)
T ss_pred eEEecCcceEEEEEeccCCceeee
Confidence 999999999999999999887654
No 106
>KOG0646|consensus
Probab=99.91 E-value=1.8e-22 Score=203.37 Aligned_cols=241 Identities=23% Similarity=0.320 Sum_probs=202.2
Q ss_pred CEEEEEeC-CCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEE
Q psy4876 348 YMLGVGTS-LGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGL 424 (609)
Q Consensus 348 ~~Lasgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 424 (609)
.+++++.. -..|.+|.+...........-.+.|.+++- +|.+|+.|+..|.|++|.+.++ ..+..+.+|-+.|+|+
T Consensus 51 ~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG-~LL~v~~aHYQ~ITcL 129 (476)
T KOG0646|consen 51 EYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSG-ILLNVLSAHYQSITCL 129 (476)
T ss_pred hheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccc-cHHHHHHhhccceeEE
Confidence 56665544 347999998766555544446678999887 4788888889999999999998 4777889999999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCC---CCCCCccceEeecCCcccEEEEEEcCCCC-cEEEEEeccCCCeEEEEECCC
Q psy4876 425 KWSPDGRYLASGGNDNLLNIWSGVPG---QHTFSTQPIHSLSRHQAAVKAIAWCPWSP-NVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 425 ~~spdg~~lasgs~Dg~I~iwd~~~~---~~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~llasggGs~Dg~I~iwd~~t 500 (609)
.|+-||.+|++|+.||.|.+|++... .......+++.+..|.-+|+++...+.|. ..+++. +.|.++++||+..
T Consensus 130 ~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~Ta--S~D~t~k~wdlS~ 207 (476)
T KOG0646|consen 130 KFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTA--SEDRTIKLWDLSL 207 (476)
T ss_pred EEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEe--cCCceEEEEEecc
Confidence 99999999999999999999986532 22224588999999999999999887532 345555 4899999999999
Q ss_pred CceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC----------------CceEEEEeCCCC--CEEEEEE
Q psy4876 501 GACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS----------------LVKVAELHGHSA--RVLNLAM 562 (609)
Q Consensus 501 ~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~----------------~~~~~~l~~h~~--~V~~l~~ 562 (609)
|..+.++.....+.+++.+|.+..+++ |..+|.|.+.++.. +..+..+.||.+ .|+|+++
T Consensus 208 g~LLlti~fp~si~av~lDpae~~~yi--Gt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLai 285 (476)
T KOG0646|consen 208 GVLLLTITFPSSIKAVALDPAERVVYI--GTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAI 285 (476)
T ss_pred ceeeEEEecCCcceeEEEcccccEEEe--cCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEE
Confidence 999999999999999999999999999 77999999988642 245566788988 9999999
Q ss_pred eCCCCEEEEEECCCCEEEEEcCCCccchhhh
Q psy4876 563 SPDETTVLSAGADETLRLWKIFEKVKSKKKE 593 (609)
Q Consensus 563 spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~ 593 (609)
+-||.+|++|+.||.|+|||+...+..+...
T Consensus 286 s~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~ 316 (476)
T KOG0646|consen 286 STDGTLLLSGDEDGKVCVWDIYSKQCIRTLQ 316 (476)
T ss_pred ecCccEEEeeCCCCCEEEEecchHHHHHHHh
Confidence 9999999999999999999999988877766
No 107
>KOG0640|consensus
Probab=99.90 E-value=7.5e-23 Score=196.10 Aligned_cols=254 Identities=19% Similarity=0.312 Sum_probs=204.5
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC------------C------eeEEEecCCCCceEEEEecC--CEEEEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSA------------K------KKCRTMDGHDVRVGALAWNT--YILSSG 393 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~------------~------~~~~~l~~h~~~V~~l~~~~--~~L~sg 393 (609)
|...+.+.+|++||.++|+|+.|..|+|+|++. + -.++++-.|...|.++.|++ .+|++|
T Consensus 111 HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~ 190 (430)
T KOG0640|consen 111 HKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISG 190 (430)
T ss_pred cccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEec
Confidence 999999999999999999999999999999861 1 24778888999999999974 799999
Q ss_pred ecCCeEEEEEcCCCCee-EEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEE
Q psy4876 394 SRCGNIVHHDVRSRDHK-VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI 472 (609)
Q Consensus 394 s~dg~I~iwd~~~~~~~-~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l 472 (609)
++|++|+++|+...... ..........|.+|.|+|.|.+|++|....++++||+.+-+... ....-..|.+.|+++
T Consensus 191 srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfv---sanPd~qht~ai~~V 267 (430)
T KOG0640|consen 191 SRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFV---SANPDDQHTGAITQV 267 (430)
T ss_pred cCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEee---ecCcccccccceeEE
Confidence 99999999999864311 11112345689999999999999999999999999999873221 111234689999999
Q ss_pred EEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc---CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEE
Q psy4876 473 AWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID---TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAE 549 (609)
Q Consensus 473 ~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~---~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~ 549 (609)
.+++.+ .+.++| +.||.|++||--+++|+.++. .++.|++..|..+++++++. +.|..+++|.+.++..+.+
T Consensus 268 ~Ys~t~-~lYvTa--SkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsS--G~DS~vkLWEi~t~R~l~~ 342 (430)
T KOG0640|consen 268 RYSSTG-SLYVTA--SKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSS--GKDSTVKLWEISTGRMLKE 342 (430)
T ss_pred EecCCc-cEEEEe--ccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeec--CCcceeeeeeecCCceEEE
Confidence 999988 578887 599999999999999999885 34589999999999999984 4899999999999999998
Q ss_pred EeCC--CC---CEEEEEEeCCCCEEEEEEC-CCCEEEEEcCCCccchhhhhh
Q psy4876 550 LHGH--SA---RVLNLAMSPDETTVLSAGA-DETLRLWKIFEKVKSKKKEIK 595 (609)
Q Consensus 550 l~~h--~~---~V~~l~~spdg~~L~s~s~-Dg~I~iWdl~~~~~~~k~~~~ 595 (609)
+.|- ++ --+...|+....+++.-.+ .+.+.-||-.+.+........
T Consensus 343 YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slg 394 (430)
T KOG0640|consen 343 YTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLG 394 (430)
T ss_pred EecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccC
Confidence 8753 12 2245567777777765543 477889999888766554443
No 108
>KOG2096|consensus
Probab=99.90 E-value=6.9e-22 Score=190.26 Aligned_cols=294 Identities=18% Similarity=0.224 Sum_probs=213.3
Q ss_pred eeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 270 YYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
-.|++|+|+.|| +++++.|+.|+||++..-.+ .....+...-.-+..+.|.|+||.
T Consensus 87 ~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~----------------------~eHr~~R~nve~dhpT~V~FapDc 144 (420)
T KOG2096|consen 87 KEVTDVAFSSDGKKLATISGDRSIRLWDVRDFEN----------------------KEHRCIRQNVEYDHPTRVVFAPDC 144 (420)
T ss_pred CceeeeEEcCCCceeEEEeCCceEEEEecchhhh----------------------hhhhHhhccccCCCceEEEECCCc
Confidence 358999999997 78899999999999986100 111111111133467899999998
Q ss_pred CEEEEEe-CCCeEEEEeCCCC---eeEE---------EecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 348 YMLGVGT-SLGTVQLWDVSAK---KKCR---------TMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 348 ~~Lasgs-~dg~I~iwd~~~~---~~~~---------~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
+-+++.. ....+++|.+... ..-. .-+.|...|..+-. ++.+|++++.|..|.+|+++ + +.+.
T Consensus 145 ~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-G-q~L~ 222 (420)
T KOG2096|consen 145 KSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-G-QLLQ 222 (420)
T ss_pred ceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-C-ceee
Confidence 6655544 4457999976432 1111 11235555655555 57899999999999999999 3 4677
Q ss_pred EEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCC--CCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCC
Q psy4876 413 LLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQH--TFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTAD 490 (609)
Q Consensus 413 ~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~--~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~D 490 (609)
.+......-...+.||+|+++|+++-.-.|++|.+--++. ......+..+.+|...|..++|+++...++.+ +.|
T Consensus 223 ~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtv---SkD 299 (420)
T KOG2096|consen 223 SIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTV---SKD 299 (420)
T ss_pred eeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEE---ecC
Confidence 7766666667789999999999999989999999643321 12234567889999999999999988665554 489
Q ss_pred CeEEEEECCC----Cc---eeEEE-----cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEE-eCCCCCE
Q psy4876 491 RHIYFWNVSS----GA---CLDSI-----DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL-HGHSARV 557 (609)
Q Consensus 491 g~I~iwd~~t----~~---~~~~~-----~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l-~~h~~~V 557 (609)
|++++||+.- ++ .+.+. ...+....+..+|.|+.|++++| ..|++|..++++...++ ..|...|
T Consensus 300 G~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g---s~l~~~~se~g~~~~~~e~~h~~~I 376 (420)
T KOG2096|consen 300 GKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG---SDLKVFASEDGKDYPELEDIHSTTI 376 (420)
T ss_pred CcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC---CceEEEEcccCccchhHHHhhcCce
Confidence 9999999852 22 22222 12345669999999999999764 67999999998887776 4599999
Q ss_pred EEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 558 LNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 558 ~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
.+|+|+++|++++|+| |..+++..-..+...+..+.
T Consensus 377 s~is~~~~g~~~atcG-dr~vrv~~ntpg~~~~V~~~ 412 (420)
T KOG2096|consen 377 SSISYSSDGKYIATCG-DRYVRVIRNTPGWHSRVVKL 412 (420)
T ss_pred eeEEecCCCcEEeeec-ceeeeeecCCCchhhHHHHh
Confidence 9999999999999986 67888887555544444333
No 109
>KOG0641|consensus
Probab=99.90 E-value=4.5e-21 Score=176.52 Aligned_cols=251 Identities=23% Similarity=0.388 Sum_probs=206.3
Q ss_pred cceeeeeeecCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCC------CCe---------eEEEecCCCCceEEEEe--c
Q psy4876 324 RAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVS------AKK---------KCRTMDGHDVRVGALAW--N 386 (609)
Q Consensus 324 ~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~------~~~---------~~~~l~~h~~~V~~l~~--~ 386 (609)
...+.+..++....|.+|+|+|.|.+.|+|+...+++|.... .+. ..+.-+.|.+.|.|.+| .
T Consensus 21 ~~f~~i~~l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ 100 (350)
T KOG0641|consen 21 KHFEAINILEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC 100 (350)
T ss_pred cceEEEEEecchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc
Confidence 344556666677899999999999999999999999886432 111 12233468999999999 5
Q ss_pred CCEEEEEecCCeEEEEEcCCCC----eeEEEEccCCCCeEEEEEccC----CCEEEEEeC-CCcEEEEeCCCCCCCCCcc
Q psy4876 387 TYILSSGSRCGNIVHHDVRSRD----HKVALLQNHTQEVCGLKWSPD----GRYLASGGN-DNLLNIWSGVPGQHTFSTQ 457 (609)
Q Consensus 387 ~~~L~sgs~dg~I~iwd~~~~~----~~~~~~~~h~~~V~~l~~spd----g~~lasgs~-Dg~I~iwd~~~~~~~~~~~ 457 (609)
|.+|++|+.|.+|++.-+.... ..-..+.-|.+.|..++|..+ |.+|++++. |..|++-|...+ +
T Consensus 101 geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g------~ 174 (350)
T KOG0641|consen 101 GELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRG------Q 174 (350)
T ss_pred cCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCC------C
Confidence 8999999999999998765431 123456779999999999653 567777664 667888888877 8
Q ss_pred ceEeecCCcccEEEE-EEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC--------CCeEEEEEcCCCCeEEEE
Q psy4876 458 PIHSLSRHQAAVKAI-AWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK--------SQVCALLWNSDYKELVSA 528 (609)
Q Consensus 458 ~~~~~~~h~~~V~~l-~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~--------~~v~sl~~s~~g~~l~~~ 528 (609)
..+.+.+|.+.|.++ .| ...++++| +.|.+|++||++-..++.++... +.|.+++..|.|++|++
T Consensus 175 ~~~a~sghtghilalysw---n~~m~~sg--sqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~s- 248 (350)
T KOG0641|consen 175 GFHALSGHTGHILALYSW---NGAMFASG--SQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLAS- 248 (350)
T ss_pred cceeecCCcccEEEEEEe---cCcEEEcc--CCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeee-
Confidence 899999999998776 45 34688886 69999999999999999888531 47999999999999999
Q ss_pred EecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 529 HGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 529 sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
|-.|....+||++.+..+..+..|...|.++.|+|.-.++.+++.|..|++-|+....
T Consensus 249 -g~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdl 306 (350)
T KOG0641|consen 249 -GHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDL 306 (350)
T ss_pred -ccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccch
Confidence 5589999999999999999999999999999999999999999999999999998754
No 110
>KOG0308|consensus
Probab=99.90 E-value=4.3e-23 Score=214.71 Aligned_cols=242 Identities=21% Similarity=0.328 Sum_probs=207.1
Q ss_pred EEEEc-cCCCEEEEEeCCCeEEEEeCCCCe------eEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCC-e
Q psy4876 340 SVAWI-QEGYMLGVGTSLGTVQLWDVSAKK------KCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRD-H 409 (609)
Q Consensus 340 ~v~~s-pdg~~Lasgs~dg~I~iwd~~~~~------~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~-~ 409 (609)
.+..+ |.+++|++|+.||.|++|++.... .+..++.|...|..+.. +++.|++++.|-+|++|+..... .
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~ 108 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTF 108 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcch
Confidence 34443 356889999999999999986432 46788899999999887 67899999999999999998764 4
Q ss_pred eEEEEccCCCCeEEEEE-ccCCCEEEEEeCCCcEEEEeCCCCCC----CCCccceEeec-CCcccEEEEEEcCCCCcEEE
Q psy4876 410 KVALLQNHTQEVCGLKW-SPDGRYLASGGNDNLLNIWSGVPGQH----TFSTQPIHSLS-RHQAAVKAIAWCPWSPNVLA 483 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~-spdg~~lasgs~Dg~I~iwd~~~~~~----~~~~~~~~~~~-~h~~~V~~l~~sp~~~~lla 483 (609)
+..++..|.+.|.|++. -++..++|+||-|+.|.+||+.++.. .........+. ++...|.+++.++.| .+++
T Consensus 109 c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~-t~iv 187 (735)
T KOG0308|consen 109 CMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTG-TIIV 187 (735)
T ss_pred hHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcc-eEEE
Confidence 67788899999999999 77888999999999999999997722 01112233333 788899999999987 6777
Q ss_pred EEeccCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEE
Q psy4876 484 SGGGTADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAM 562 (609)
Q Consensus 484 sggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~ 562 (609)
+|| ..+.|++||.++++.+..+.+|. .|..+..++||..++++ +.||+|++||+...+++.++..|...|+++..
T Consensus 188 sGg--tek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~--sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~ 263 (735)
T KOG0308|consen 188 SGG--TEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSA--SSDGTIRLWDLGQQRCLATYIVHKEGVWALQS 263 (735)
T ss_pred ecC--cccceEEeccccccceeeeeccccceEEEEEcCCCCeEeec--CCCceEEeeeccccceeeeEEeccCceEEEee
Confidence 764 89999999999999988888774 89999999999999995 48999999999999999999999999999999
Q ss_pred eCCCCEEEEEECCCCEEEEEcCCC
Q psy4876 563 SPDETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 563 spdg~~L~s~s~Dg~I~iWdl~~~ 586 (609)
+|+=..+++|+.||.|..=|+.+.
T Consensus 264 ~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 264 SPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred CCCcceEEecCCCCcEEecccCCc
Confidence 999999999999999999998874
No 111
>KOG1539|consensus
Probab=99.90 E-value=6.6e-22 Score=211.06 Aligned_cols=284 Identities=17% Similarity=0.253 Sum_probs=232.6
Q ss_pred eeEEEEEecCCC--eEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHFN--VLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spd 346 (609)
-.|..++|..|| ++| ++..|.+.+||++. .+...+..-.|.+.|....|.+.
T Consensus 245 g~VtslSFrtDG~p~las~~~~G~m~~wDLe~-------------------------kkl~~v~~nah~~sv~~~~fl~~ 299 (910)
T KOG1539|consen 245 GRVTSLSFRTDGNPLLASGRSNGDMAFWDLEK-------------------------KKLINVTRNAHYGSVTGATFLPG 299 (910)
T ss_pred cceeEEEeccCCCeeEEeccCCceEEEEEcCC-------------------------CeeeeeeeccccCCcccceecCC
Confidence 458999999887 555 55569999999998 55555444448899999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCC----eeEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCC-------------
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAK----KKCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRS------------- 406 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~----~~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~------------- 406 (609)
...|++++.|..+++|-.+++ +.++.-.||..+..++.| +++.+.+++.|++++.+++..
T Consensus 300 epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~ 379 (910)
T KOG1539|consen 300 EPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNK 379 (910)
T ss_pred CceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccc
Confidence 999999999999888865543 456777789999999998 578888888887766655431
Q ss_pred ----------------------------------------------------CCeeEEEEc-----cCCCCeEEEEEccC
Q psy4876 407 ----------------------------------------------------RDHKVALLQ-----NHTQEVCGLKWSPD 429 (609)
Q Consensus 407 ----------------------------------------------------~~~~~~~~~-----~h~~~V~~l~~spd 429 (609)
...-...+. .....+++++.++.
T Consensus 380 ~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~C 459 (910)
T KOG1539|consen 380 KRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFC 459 (910)
T ss_pred cccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEecc
Confidence 100000111 01256889999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCCCCCccceEee---cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEE
Q psy4876 430 GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL---SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDS 506 (609)
Q Consensus 430 g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~---~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~ 506 (609)
|++.+.|...|.|-+|++.+| .....+ ..|..+|++++...-+. ++++++ .+|.+.+||......+..
T Consensus 460 GNF~~IG~S~G~Id~fNmQSG------i~r~sf~~~~ah~~~V~gla~D~~n~-~~vsa~--~~Gilkfw~f~~k~l~~~ 530 (910)
T KOG1539|consen 460 GNFVFIGYSKGTIDRFNMQSG------IHRKSFGDSPAHKGEVTGLAVDGTNR-LLVSAG--ADGILKFWDFKKKVLKKS 530 (910)
T ss_pred CceEEEeccCCeEEEEEcccC------eeecccccCccccCceeEEEecCCCc-eEEEcc--CcceEEEEecCCcceeee
Confidence 999999999999999999998 444555 47999999999987664 555553 899999999999999999
Q ss_pred EcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCC
Q psy4876 507 IDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 507 ~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~ 586 (609)
+.....+..+.++.....++++. +|-.|.++|..+.+.+..+.||.++|++++|||||++|++++.|++||+||+-++
T Consensus 531 l~l~~~~~~iv~hr~s~l~a~~~--ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~ 608 (910)
T KOG1539|consen 531 LRLGSSITGIVYHRVSDLLAIAL--DDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTG 608 (910)
T ss_pred eccCCCcceeeeeehhhhhhhhc--CceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCc
Confidence 99999999999999999998855 7999999999999999999999999999999999999999999999999999887
Q ss_pred ccc
Q psy4876 587 VKS 589 (609)
Q Consensus 587 ~~~ 589 (609)
...
T Consensus 609 ~lI 611 (910)
T KOG1539|consen 609 TLI 611 (910)
T ss_pred cee
Confidence 754
No 112
>KOG0321|consensus
Probab=99.90 E-value=2.3e-22 Score=208.96 Aligned_cols=284 Identities=22% Similarity=0.321 Sum_probs=211.6
Q ss_pred CeEEEE-cCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCe
Q psy4876 281 NVLAVA-LGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGT 358 (609)
Q Consensus 281 ~lla~s-~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~ 358 (609)
.+|+++ .||.|.++|..... |. .+...+.... |...|.++.|.|....|++++.|.+
T Consensus 65 HiLavadE~G~i~l~dt~~~~-------fr--------------~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT 123 (720)
T KOG0321|consen 65 HILAVADEDGGIILFDTKSIV-------FR--------------LEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDST 123 (720)
T ss_pred ceEEEecCCCceeeecchhhh-------cc--------------hhhhhhcccccccceeEeeccCCCceeEEEccCCce
Confidence 367755 57999999987610 00 0111223333 9999999999997689999999999
Q ss_pred EEEEeCCCCeeEEE--ecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCC-------------------------
Q psy4876 359 VQLWDVSAKKKCRT--MDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRD------------------------- 408 (609)
Q Consensus 359 I~iwd~~~~~~~~~--l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~------------------------- 408 (609)
+++||+...+++.. +.+|...|.+++| +...|++|++||.|.|||++...
T Consensus 124 ~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~ 203 (720)
T KOG0321|consen 124 IRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPL 203 (720)
T ss_pred eeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchh
Confidence 99999999988877 8999999999999 68999999999999999998432
Q ss_pred -eeEEEEccCCCCeEE---EEEccCCCEEEEEeC-CCcEEEEeCCCCCCCCCccceEeec--CC---cccEEEEEEcCCC
Q psy4876 409 -HKVALLQNHTQEVCG---LKWSPDGRYLASGGN-DNLLNIWSGVPGQHTFSTQPIHSLS--RH---QAAVKAIAWCPWS 478 (609)
Q Consensus 409 -~~~~~~~~h~~~V~~---l~~spdg~~lasgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~--~h---~~~V~~l~~sp~~ 478 (609)
..+.....+...|.+ +.+..|...||+++. |+.|+|||++........++..... .| ...+.++.....|
T Consensus 204 ~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssG 283 (720)
T KOG0321|consen 204 KKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSG 283 (720)
T ss_pred hccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCC
Confidence 001111234444555 556678889999888 9999999999875544444443332 23 3357788888888
Q ss_pred CcEEEEEeccCCCeEEEEECCCCc--eeEEEcCC---CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc-eEEEEeC
Q psy4876 479 PNVLASGGGTADRHIYFWNVSSGA--CLDSIDTK---SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV-KVAELHG 552 (609)
Q Consensus 479 ~~llasggGs~Dg~I~iwd~~t~~--~~~~~~~~---~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~-~~~~l~~ 552 (609)
.+|+|++ .|+.|++||+.+-. ++..+.++ ..-..-..+|++.++++ |..|...+||.+.+.+ ....+.+
T Consensus 284 t~L~AsC---tD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~S--gSsd~~ayiw~vs~~e~~~~~l~G 358 (720)
T KOG0321|consen 284 TYLFASC---TDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLS--GSSDEQAYIWVVSSPEAPPALLLG 358 (720)
T ss_pred CeEEEEe---cCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEec--cCCCcceeeeeecCccCChhhhhC
Confidence 9999998 59999999998543 23333322 22334467899999999 6689999999998754 4556789
Q ss_pred CCCCEEEEEEeCC-CCEEEEEECCCCEEEEEcCCCccch
Q psy4876 553 HSARVLNLAMSPD-ETTVLSAGADETLRLWKIFEKVKSK 590 (609)
Q Consensus 553 h~~~V~~l~~spd-g~~L~s~s~Dg~I~iWdl~~~~~~~ 590 (609)
|.-.|++++|.|. -.-+++++.|..++||++..+....
T Consensus 359 ht~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l~e~ 397 (720)
T KOG0321|consen 359 HTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGLEEI 397 (720)
T ss_pred cceEEEEEeeccccCCCceeeccCcceEEEeccCchhhc
Confidence 9999999999883 2357777999999999997766554
No 113
>KOG1274|consensus
Probab=99.90 E-value=1.6e-21 Score=210.32 Aligned_cols=272 Identities=18% Similarity=0.277 Sum_probs=213.5
Q ss_pred EEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCC
Q psy4876 272 LNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGY 348 (609)
Q Consensus 272 v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~ 348 (609)
.+.|+|.|+| +++++.||.|++|+..... +.-..+. +...|.+++. .+.
T Consensus 16 ~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~--------------------------e~P~ti~~~g~~v~~ia~--~s~ 67 (933)
T KOG1274|consen 16 LTLICYDPDGEFICTCGSDGDIRKWKTNSDE--------------------------EEPETIDISGELVSSIAC--YSN 67 (933)
T ss_pred eEEEEEcCCCCEEEEecCCCceEEeecCCcc--------------------------cCCchhhccCceeEEEee--ccc
Confidence 6779999987 7889999999999987620 1111222 5566666665 456
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEE
Q psy4876 349 MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKW 426 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 426 (609)
+|++|+.+++|.+|.+.+++.-..+....-++.+++++ |.+++.|+.|-.|++.+..... ....+.+|.++|.+|.|
T Consensus 68 ~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s-~~~~lrgh~apVl~l~~ 146 (933)
T KOG1274|consen 68 HFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSS-QEKVLRGHDAPVLQLSY 146 (933)
T ss_pred ceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccc-hheeecccCCceeeeeE
Confidence 99999999999999999888777777777888999994 6799999999999999999874 77889999999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC--CcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCcee
Q psy4876 427 SPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR--HQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 427 spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~ 504 (609)
+|.+++||+.+-||.|+|||+.++........+..-.. ....+..++|+|++..+++.+ .|+.|++|+..+++..
T Consensus 147 ~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~---~d~~Vkvy~r~~we~~ 223 (933)
T KOG1274|consen 147 DPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPP---VDNTVKVYSRKGWELQ 223 (933)
T ss_pred cCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeec---cCCeEEEEccCCceeh
Confidence 99999999999999999999998733211111111111 134567899999988888876 6999999999999988
Q ss_pred EEEcCC---CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 505 DSIDTK---SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 505 ~~~~~~---~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
..+... +.++.+.|+|+|+||++ ++.+|.|.|||..+.+. +.....|.+++|.|++..+-.-...|...+|
T Consensus 224 f~Lr~~~~ss~~~~~~wsPnG~YiAA--s~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 224 FKLRDKLSSSKFSDLQWSPNGKYIAA--STLDGQILVWNVDTHER----HEFKRAVCCEAWKPNANAITLITALGTLGVS 297 (933)
T ss_pred eeecccccccceEEEEEcCCCcEEee--eccCCcEEEEecccchh----ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence 887643 35999999999999999 56999999999988332 2234679999999998866555555554444
No 114
>KOG1332|consensus
Probab=99.89 E-value=3.1e-22 Score=186.52 Aligned_cols=247 Identities=21% Similarity=0.327 Sum_probs=197.4
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC---eeEEEecCCCCceEEEEe-c---CCEEEEEecCCeEEEEEcCC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK---KKCRTMDGHDVRVGALAW-N---TYILSSGSRCGNIVHHDVRS 406 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~---~~~~~l~~h~~~V~~l~~-~---~~~L~sgs~dg~I~iwd~~~ 406 (609)
|.+.|.++...--|++||+++.|++|+|+.+... +++.++.+|.++|..++| + |.+|++++.||.|.||.-..
T Consensus 10 H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~ 89 (299)
T KOG1332|consen 10 HEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEEN 89 (299)
T ss_pred hhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCC
Confidence 8888888888888999999999999999999754 578899999999999999 4 78999999999999999887
Q ss_pred CC-eeEEEEccCCCCeEEEEEcc--CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCC---C--
Q psy4876 407 RD-HKVALLQNHTQEVCGLKWSP--DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPW---S-- 478 (609)
Q Consensus 407 ~~-~~~~~~~~h~~~V~~l~~sp--dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~---~-- 478 (609)
+. ........|...|++++|-| -|-.||+++.||.|.|.+.+.... .........|.-.|++++|.|- |
T Consensus 90 g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~---w~t~ki~~aH~~GvnsVswapa~~~g~~ 166 (299)
T KOG1332|consen 90 GRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGG---WTTSKIVFAHEIGVNSVSWAPASAPGSL 166 (299)
T ss_pred CchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCC---ccchhhhhccccccceeeecCcCCCccc
Confidence 63 23455678999999999988 466899999999999999876511 1233445679999999999996 2
Q ss_pred --------CcEEEEEeccCCCeEEEEECCCCc--eeEEEcCC-CCeEEEEEcCCC----CeEEEEEecCCCeEEEEECCC
Q psy4876 479 --------PNVLASGGGTADRHIYFWNVSSGA--CLDSIDTK-SQVCALLWNSDY----KELVSAHGFAQNQLIIWKYPS 543 (609)
Q Consensus 479 --------~~llasggGs~Dg~I~iwd~~t~~--~~~~~~~~-~~v~sl~~s~~g----~~l~~~sG~~dg~I~Iwd~~~ 543 (609)
..-|++|| .|..|+||+..++. ....+..| .-|+.++|.|.- .++++ ++.||.|.||....
T Consensus 167 ~~~~~~~~~krlvSgG--cDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS--~SqDg~viIwt~~~ 242 (299)
T KOG1332|consen 167 VDQGPAAKVKRLVSGG--CDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIAS--CSQDGTVIIWTKDE 242 (299)
T ss_pred cccCcccccceeeccC--CccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEE--ecCCCcEEEEEecC
Confidence 13477876 89999999998764 22335555 489999999975 34455 55999999998752
Q ss_pred C-c--eEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 544 L-V--KVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 544 ~-~--~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
. + ....+......+..+.||..|..|+.++.|+.|.+|.-....
T Consensus 243 e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~G 289 (299)
T KOG1332|consen 243 EYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDG 289 (299)
T ss_pred ccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCCC
Confidence 2 1 122334456789999999999999999999999999866543
No 115
>KOG1332|consensus
Probab=99.89 E-value=3.6e-22 Score=186.02 Aligned_cols=236 Identities=22% Similarity=0.417 Sum_probs=190.0
Q ss_pred EEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc--CCCEEE
Q psy4876 275 IDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ--EGYMLG 351 (609)
Q Consensus 275 l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp--dg~~La 351 (609)
+++....+++++.|++|+|+.+..+ +....+.++. |.++|..++|.. -|.+||
T Consensus 19 lDyygkrlATcsSD~tVkIf~v~~n------------------------~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLA 74 (299)
T KOG1332|consen 19 LDYYGKRLATCSSDGTVKIFEVRNN------------------------GQSKLLAELTGHSGPVWKVAWAHPKFGTILA 74 (299)
T ss_pred hhhhcceeeeecCCccEEEEEEcCC------------------------CCceeeeEecCCCCCeeEEeecccccCcEee
Confidence 3444556888999999999999872 4446788888 999999999976 689999
Q ss_pred EEeCCCeEEEEeCCCCe--eEEEecCCCCceEEEEe--c--CCEEEEEecCCeEEEEEcCCCC--eeEEEEccCCCCeEE
Q psy4876 352 VGTSLGTVQLWDVSAKK--KCRTMDGHDVRVGALAW--N--TYILSSGSRCGNIVHHDVRSRD--HKVALLQNHTQEVCG 423 (609)
Q Consensus 352 sgs~dg~I~iwd~~~~~--~~~~l~~h~~~V~~l~~--~--~~~L~sgs~dg~I~iwd~~~~~--~~~~~~~~h~~~V~~ 423 (609)
+++.||.|.||.-+.++ .......|...|++++| + |-.|++++.||.|.|.+++... ........|.-.|++
T Consensus 75 ScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~Gvns 154 (299)
T KOG1332|consen 75 SCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNS 154 (299)
T ss_pred EeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccce
Confidence 99999999999988774 34556789999999999 2 6789999999999999988652 234456789999999
Q ss_pred EEEccC---C-----------CEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCC---CcEEEEEe
Q psy4876 424 LKWSPD---G-----------RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWS---PNVLASGG 486 (609)
Q Consensus 424 l~~spd---g-----------~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~---~~llasgg 486 (609)
++|.|. | +.|++|+.|+.|+||+...+. ...-..+.+|.+.|+.++|+|.- ...++++
T Consensus 155 Vswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~----w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~- 229 (299)
T KOG1332|consen 155 VSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDS----WKLERTLEGHKDWVRDVAWAPSVGLPKSTIASC- 229 (299)
T ss_pred eeecCcCCCccccccCcccccceeeccCCccceeeeecCCcc----hhhhhhhhhcchhhhhhhhccccCCCceeeEEe-
Confidence 999995 5 569999999999999998863 24445689999999999999964 3457776
Q ss_pred ccCCCeEEEEECCCC--ceeEEE--cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 487 GTADRHIYFWNVSSG--ACLDSI--DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t~--~~~~~~--~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
+.||++.||-.+.. .-..++ +....+..+.|+..|+.|+++. .|+.|.+|.-.
T Consensus 230 -SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~--GdNkvtlwke~ 286 (299)
T KOG1332|consen 230 -SQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSG--GDNKVTLWKEN 286 (299)
T ss_pred -cCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEec--CCcEEEEEEeC
Confidence 59999999987622 111111 1345799999999999999954 69999999854
No 116
>KOG0289|consensus
Probab=99.89 E-value=1.3e-21 Score=195.36 Aligned_cols=235 Identities=19% Similarity=0.265 Sum_probs=202.5
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEE
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVAL 413 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~ 413 (609)
..++++...+....+++|+.|..+.++|...++.+..+.||...|..+.++ ...+++++.|..|+||...... ....
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s-~~~~ 298 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS-EPTS 298 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc-Cccc
Confidence 567888888887899999999999999999999999999999999999996 4778899999999999998764 6667
Q ss_pred EccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC--CcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 414 LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR--HQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 414 ~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
...|..+|+.+..+|.|.||+++++|++..+.|++++ ..+..... ..-.+++.+||||| .++.+| +.|+
T Consensus 299 ~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g------~~lt~vs~~~s~v~~ts~~fHpDg-Lifgtg--t~d~ 369 (506)
T KOG0289|consen 299 SRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSG------SQLTVVSDETSDVEYTSAAFHPDG-LIFGTG--TPDG 369 (506)
T ss_pred cccccccceeeeeccCCcEEEEecCCceEEEEEccCC------cEEEEEeeccccceeEEeeEcCCc-eEEecc--CCCc
Confidence 7889999999999999999999999999999999998 44444332 33458999999998 566665 6999
Q ss_pred eEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC-CCCEEEEEEeCCCCEE
Q psy4876 492 HIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH-SARVLNLAMSPDETTV 569 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h-~~~V~~l~~spdg~~L 569 (609)
.|+|||+.++..+..|.+| ++|..+.|+.+|-+|++++ +|+.|++||++..+...++.-. ...|.+++|.+.|.+|
T Consensus 370 ~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~a--dd~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L 447 (506)
T KOG0289|consen 370 VVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAA--DDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYL 447 (506)
T ss_pred eEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEe--cCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeE
Confidence 9999999999988889877 4999999999999999965 8999999999988877776533 2369999999999999
Q ss_pred EEEECCCCEEEEE
Q psy4876 570 LSAGADETLRLWK 582 (609)
Q Consensus 570 ~s~s~Dg~I~iWd 582 (609)
+.++.|=.|++++
T Consensus 448 ~~~g~~l~Vy~~~ 460 (506)
T KOG0289|consen 448 GIAGSDLQVYICK 460 (506)
T ss_pred EeecceeEEEEEe
Confidence 9998775555554
No 117
>KOG0299|consensus
Probab=99.89 E-value=1.6e-21 Score=196.28 Aligned_cols=241 Identities=23% Similarity=0.311 Sum_probs=204.2
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEE----E-------------e-cCCCCceEEEEe--cCCEEEEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCR----T-------------M-DGHDVRVGALAW--NTYILSSG 393 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~----~-------------l-~~h~~~V~~l~~--~~~~L~sg 393 (609)
|.-.|++|+++|++.++++++.+|+|.=|++.+++..+ . - .+|...+.+++. ++.+|++|
T Consensus 141 H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatg 220 (479)
T KOG0299|consen 141 HQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATG 220 (479)
T ss_pred ccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEec
Confidence 88999999999999999999999999999998876431 1 0 267778888888 68999999
Q ss_pred ecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEE
Q psy4876 394 SRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473 (609)
Q Consensus 394 s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~ 473 (609)
+.|..|.||+.++.+ .+..+.+|.+.|.+++|-.....+++++.|+.|++|+++.. ..+.++.+|+..|.+|.
T Consensus 221 g~d~~v~Iw~~~t~e-hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~------s~vetlyGHqd~v~~Id 293 (479)
T KOG0299|consen 221 GRDRHVQIWDCDTLE-HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL------SYVETLYGHQDGVLGID 293 (479)
T ss_pred CCCceEEEecCcccc-hhhcccccccceeeeeeecCccceeeeecCCceEEEehhHh------HHHHHHhCCccceeeec
Confidence 999999999999984 77889999999999999988888999999999999999987 77888999999999998
Q ss_pred EcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe-C
Q psy4876 474 WCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH-G 552 (609)
Q Consensus 474 ~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~-~ 552 (609)
...-+ .++.+|+ .|+++++|++.....+.-..+.+.+-+++|-.+..+ ++ |+++|.|.+|++...++++... .
T Consensus 294 aL~re-R~vtVGg--rDrT~rlwKi~eesqlifrg~~~sidcv~~In~~Hf-vs--GSdnG~IaLWs~~KKkplf~~~~A 367 (479)
T KOG0299|consen 294 ALSRE-RCVTVGG--RDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHF-VS--GSDNGSIALWSLLKKKPLFTSRLA 367 (479)
T ss_pred hhccc-ceEEecc--ccceeEEEeccccceeeeeCCCCCeeeEEEecccce-ee--ccCCceEEEeeecccCceeEeecc
Confidence 77654 4666654 899999999965554444445568889998877654 44 7799999999999888887653 2
Q ss_pred CC-----------CCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 553 HS-----------ARVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 553 h~-----------~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
|. .+|++++..|...++++|+.+|.||+|.+.++-
T Consensus 368 Hgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~ 413 (479)
T KOG0299|consen 368 HGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGL 413 (479)
T ss_pred ccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCc
Confidence 31 289999999999999999999999999999884
No 118
>KOG2445|consensus
Probab=99.89 E-value=6.1e-21 Score=183.25 Aligned_cols=249 Identities=18% Similarity=0.325 Sum_probs=192.1
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC----eeEEEecCCCCceEEEEe----cCCEEEEEecCCeEEEEEcC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK----KKCRTMDGHDVRVGALAW----NTYILSSGSRCGNIVHHDVR 405 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~----~~~~~l~~h~~~V~~l~~----~~~~L~sgs~dg~I~iwd~~ 405 (609)
|.+-|.++.|.+.|+.+|+|+.|++|+|||..+. .+....+.|.+.|..+.| -|+.+++++.|+++.||.-.
T Consensus 12 h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~ 91 (361)
T KOG2445|consen 12 HKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQ 91 (361)
T ss_pred CcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeec
Confidence 7888999999999999999999999999996543 456677889999999999 37999999999999999763
Q ss_pred CCC--------eeEEEEccCCCCeEEEEEcc--CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec-------CCccc
Q psy4876 406 SRD--------HKVALLQNHTQEVCGLKWSP--DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS-------RHQAA 468 (609)
Q Consensus 406 ~~~--------~~~~~~~~h~~~V~~l~~sp--dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~-------~h~~~ 468 (609)
... ....++....+.|+.++|.| -|-.||+++.||.|+||+.-...........+.+. .+...
T Consensus 92 ~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~ 171 (361)
T KOG2445|consen 92 EKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQP 171 (361)
T ss_pred ccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCc
Confidence 211 23455667788999999999 57789999999999999976553333333444443 45667
Q ss_pred EEEEEEcCC--CCcEEEEEeccCC-----CeEEEEECCCCc----eeEEEc-CCCCeEEEEEcCC----CCeEEEEEecC
Q psy4876 469 VKAIAWCPW--SPNVLASGGGTAD-----RHIYFWNVSSGA----CLDSID-TKSQVCALLWNSD----YKELVSAHGFA 532 (609)
Q Consensus 469 V~~l~~sp~--~~~llasggGs~D-----g~I~iwd~~t~~----~~~~~~-~~~~v~sl~~s~~----g~~l~~~sG~~ 532 (609)
..|+.|+|. ...+|+.|. .+ +.++||....+. .+.++. +..+|+.++|.|+ +..|++++ .
T Consensus 172 ~~CvsWn~sr~~~p~iAvgs--~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~--k 247 (361)
T KOG2445|consen 172 CFCVSWNPSRMHEPLIAVGS--DEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVAT--K 247 (361)
T ss_pred ceEEeeccccccCceEEEEc--ccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEee--c
Confidence 889999974 235788774 22 378888776433 223333 4469999999996 34566644 7
Q ss_pred CCeEEEEECCC--------------------CceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 533 QNQLIIWKYPS--------------------LVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 533 dg~I~Iwd~~~--------------------~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
|| |+||++.. -+.+..+.+|.+.|+.+.|+-.|..|++.|.||.||+|...-..
T Consensus 248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n 321 (361)
T KOG2445|consen 248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNN 321 (361)
T ss_pred Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhh
Confidence 88 99999862 13456678899999999999999999999999999999865433
No 119
>KOG0643|consensus
Probab=99.89 E-value=8.3e-21 Score=179.05 Aligned_cols=237 Identities=18% Similarity=0.259 Sum_probs=201.2
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
|+.+++.+.++.+|.+|.+++.|..+.||-..+|+.+.++.+|.+.|+|+.. +...+++|+.|.++++||+.++. .+
T Consensus 9 HERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk-~l 87 (327)
T KOG0643|consen 9 HERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGK-QL 87 (327)
T ss_pred CccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCc-EE
Confidence 8999999999999999999999999999999999999999999999999887 57899999999999999999984 55
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeC-----CCcEEEEeCCCCCC-CCCccceEeecCCcccEEEEEEcCCCCcEEEEE
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGN-----DNLLNIWSGVPGQH-TFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASG 485 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~-----Dg~I~iwd~~~~~~-~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasg 485 (609)
..+. ....|..+.|+++|++++.+.. .+.|.++|++.... .....|...+..+...++.+-|.|-+..++ +|
T Consensus 88 a~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii-~G 165 (327)
T KOG0643|consen 88 ATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETII-AG 165 (327)
T ss_pred EEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEE-Ee
Confidence 5554 5678999999999998887754 36799999985431 122367888888999999999999886554 44
Q ss_pred eccCCCeEEEEECCCCcee-EEEc-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEe
Q psy4876 486 GGTADRHIYFWNVSSGACL-DSID-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMS 563 (609)
Q Consensus 486 gGs~Dg~I~iwd~~t~~~~-~~~~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~s 563 (609)
..||.|.+||+++|..+ .+.+ +...|+.++++++..++++ |+.|.+-++||..+.+.++++. ...+|++.+++
T Consensus 166 --he~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT--~s~Dttakl~D~~tl~v~Kty~-te~PvN~aais 240 (327)
T KOG0643|consen 166 --HEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFIT--GSKDTTAKLVDVRTLEVLKTYT-TERPVNTAAIS 240 (327)
T ss_pred --cCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEe--cccCccceeeeccceeeEEEee-ecccccceecc
Confidence 38999999999998654 4434 4459999999999999999 5589999999999999999886 45789999999
Q ss_pred CCCCEEEEEECCCCE
Q psy4876 564 PDETTVLSAGADETL 578 (609)
Q Consensus 564 pdg~~L~s~s~Dg~I 578 (609)
|....++.|+.....
T Consensus 241 P~~d~VilgGGqeA~ 255 (327)
T KOG0643|consen 241 PLLDHVILGGGQEAM 255 (327)
T ss_pred cccceEEecCCceee
Confidence 988888887765443
No 120
>KOG4283|consensus
Probab=99.89 E-value=6.9e-21 Score=181.62 Aligned_cols=297 Identities=19% Similarity=0.290 Sum_probs=219.9
Q ss_pred eeEEEEEecCC-C--eEEEEcCCeEEEEeCCCCC--CCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEc
Q psy4876 270 YYLNLIDWSHF-N--VLAVALGGSIYLWNGESDS--NSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWI 344 (609)
Q Consensus 270 ~~v~~l~wsp~-~--lla~s~dg~I~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~s 344 (609)
-.||.|+..+. + +|+++.||.|.+||++... +..+.++ ...|+ +..-.+-.|.-.|.++.|-
T Consensus 44 GsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~--------k~~c~-----v~~~h~~~Hky~iss~~Wy 110 (397)
T KOG4283|consen 44 GSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIA--------KHKCI-----VAKQHENGHKYAISSAIWY 110 (397)
T ss_pred CccceeeeccccceEEeecCCCccEEEEEeccccchhhcccee--------heeee-----ccccCCccceeeeeeeEEe
Confidence 45888888875 3 8889999999999998732 1111110 00110 0111111277889999999
Q ss_pred cC-CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec-----CCEEEEEecCCeEEEEEcCCCCeeEEEEccCC
Q psy4876 345 QE-GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN-----TYILSSGSRCGNIVHHDVRSRDHKVALLQNHT 418 (609)
Q Consensus 345 pd-g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~-----~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~ 418 (609)
|- .-.+.+++-|.+++|||..+-+....+. ..+.|.+-+|+ ..++++|.++-.|++.|+..+ ...+++.+|.
T Consensus 111 P~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG-s~sH~LsGHr 188 (397)
T KOG4283|consen 111 PIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG-SFSHTLSGHR 188 (397)
T ss_pred eecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCC-cceeeecccc
Confidence 94 4677889999999999999988777776 56677777773 357788888999999999998 5889999999
Q ss_pred CCeEEEEEccCCCE-EEEEeCCCcEEEEeCCCCCCC---------CCccceEeecCCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 419 QEVCGLKWSPDGRY-LASGGNDNLLNIWSGVPGQHT---------FSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 419 ~~V~~l~~spdg~~-lasgs~Dg~I~iwd~~~~~~~---------~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs 488 (609)
+.|.++.|+|...+ |++|+.||.|++||++..... .....+..-..|.+.|..++|..++.+++..|
T Consensus 189 ~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~g--- 265 (397)
T KOG4283|consen 189 DGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCG--- 265 (397)
T ss_pred CceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhcc---
Confidence 99999999997765 789999999999999865211 01112223456889999999999998777765
Q ss_pred CCCeEEEEECCCCceeE-EE---c----CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEE
Q psy4876 489 ADRHIYFWNVSSGACLD-SI---D----TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNL 560 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~~~~-~~---~----~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l 560 (609)
.|..+++|+..+|+... .+ - .+-.+. +. +-+...++..- .++.+.++.+-++..+..+..|-..|.|.
T Consensus 266 td~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p--~~~~lall~~~sgs~ir~l~~h~k~i~c~ 341 (397)
T KOG4283|consen 266 TDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFP--NDGSLALLNLLEGSFVRRLSTHLKRINCA 341 (397)
T ss_pred CccceEEeecccCcccccccccccccccccceEE-Ee-ecccceEEEEe--cCCeEEEEEccCceEEEeeecccceeeEE
Confidence 69999999999876321 11 0 111222 23 44444444432 46999999999999999999999999999
Q ss_pred EEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 561 AMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 561 ~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
++-|+=+...++..|+.|..|-..-..+
T Consensus 342 ~~~~~fq~~~tg~~d~ni~~w~p~l~~p 369 (397)
T KOG4283|consen 342 AYRPDFEQCFTGDMNGNIYMWSPALKSP 369 (397)
T ss_pred eecCchhhhhccccCCccccccccccCC
Confidence 9999999999999999999998844333
No 121
>KOG2055|consensus
Probab=99.88 E-value=3.2e-21 Score=193.88 Aligned_cols=278 Identities=14% Similarity=0.244 Sum_probs=221.4
Q ss_pred eeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
..|++|.|+|.. ++++|.|+.++||.+.. ..-..+..+. ...+|.+.+|.|+
T Consensus 214 ~~I~sv~FHp~~plllvaG~d~~lrifqvDG-------------------------k~N~~lqS~~l~~fPi~~a~f~p~ 268 (514)
T KOG2055|consen 214 GGITSVQFHPTAPLLLVAGLDGTLRIFQVDG-------------------------KVNPKLQSIHLEKFPIQKAEFAPN 268 (514)
T ss_pred CCceEEEecCCCceEEEecCCCcEEEEEecC-------------------------ccChhheeeeeccCccceeeecCC
Confidence 348999999985 78899999999999986 3334455555 6789999999999
Q ss_pred CC-EEEEEeCCCeEEEEeCCCCeeEE--EecCCCC-ceEE--EEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCC
Q psy4876 347 GY-MLGVGTSLGTVQLWDVSAKKKCR--TMDGHDV-RVGA--LAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQE 420 (609)
Q Consensus 347 g~-~Lasgs~dg~I~iwd~~~~~~~~--~l~~h~~-~V~~--l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 420 (609)
|. .+++++....+..||+.+.+... .+.++.. .+.. ++-++.+|+..+..|.|.+....+++ .+..++ ..+.
T Consensus 269 G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~e-li~s~K-ieG~ 346 (514)
T KOG2055|consen 269 GHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKE-LITSFK-IEGV 346 (514)
T ss_pred CceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhh-hhheee-eccE
Confidence 97 88899998999999999876433 3334432 2222 33368899999999999999988874 555554 5678
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccE--EEEEEcCCCCcEEEEEeccCCCeEEEEEC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAV--KAIAWCPWSPNVLASGGGTADRHIYFWNV 498 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V--~~l~~sp~~~~llasggGs~Dg~I~iwd~ 498 (609)
|..++|+.|++.|++++.+|.|++||++.. .+++.+.. .+.| +.++.++++. +||+| +..|.|.|||.
T Consensus 347 v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~------~~~~rf~D-~G~v~gts~~~S~ng~-ylA~G--S~~GiVNIYd~ 416 (514)
T KOG2055|consen 347 VSDFTFSSDSKELLASGGTGEVYVWNLRQN------SCLHRFVD-DGSVHGTSLCISLNGS-YLATG--SDSGIVNIYDG 416 (514)
T ss_pred EeeEEEecCCcEEEEEcCCceEEEEecCCc------ceEEEEee-cCccceeeeeecCCCc-eEEec--cCcceEEEecc
Confidence 999999999999999999999999999987 67777754 3334 5566668774 78886 69999999997
Q ss_pred CC------CceeEEEc-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC---CCCEEEEEEeCCCCE
Q psy4876 499 SS------GACLDSID-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH---SARVLNLAMSPDETT 568 (609)
Q Consensus 499 ~t------~~~~~~~~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h---~~~V~~l~~spdg~~ 568 (609)
.+ .+++..+. .-..|+++.|+++...|+.++....+.+++..+++......+... -+.|+||+|+|.|.+
T Consensus 417 ~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~ 496 (514)
T KOG2055|consen 417 NSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGY 496 (514)
T ss_pred chhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCce
Confidence 53 23444443 245899999999999999998888999999999998877766543 356999999999999
Q ss_pred EEEEECCCCEEEEEcC
Q psy4876 569 VLSAGADETLRLWKIF 584 (609)
Q Consensus 569 L~s~s~Dg~I~iWdl~ 584 (609)
||.|..+|.|.+|.+.
T Consensus 497 lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 497 LAVGNEAGRVHLFKLH 512 (514)
T ss_pred EEeecCCCceeeEeec
Confidence 9999999999999974
No 122
>KOG0772|consensus
Probab=99.88 E-value=8.7e-22 Score=200.03 Aligned_cols=251 Identities=18% Similarity=0.346 Sum_probs=191.3
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
...|+++.|++.+ +|+++.....+|+|-... .+..|...+.-+..+.... |...++|.+|+|
T Consensus 214 ~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~---------------~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP 278 (641)
T KOG0772|consen 214 THQINSLQYSVTGDQILVVSGSAQAKLLDRDGF---------------EIVEFSKGDQYIRDMYNTKGHIAELTCGCWHP 278 (641)
T ss_pred ccccceeeecCCCCeEEEEecCcceeEEccCCc---------------eeeeeeccchhhhhhhccCCceeeeecccccc
Confidence 3458999999975 888888899999997651 1222222222233333333 889999999999
Q ss_pred CC-CEEEEEeCCCeEEEEeCCCCe-eEEEec-----CCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCC--eeEEEE
Q psy4876 346 EG-YMLGVGTSLGTVQLWDVSAKK-KCRTMD-----GHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRD--HKVALL 414 (609)
Q Consensus 346 dg-~~Lasgs~dg~I~iwd~~~~~-~~~~l~-----~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~--~~~~~~ 414 (609)
+. ..+++++.||+++|||+...+ .+..+. +..-.++.++| ++..|++|+.||.|.+|+..... .....-
T Consensus 279 ~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk 358 (641)
T KOG0772|consen 279 DNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVK 358 (641)
T ss_pred CcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEee
Confidence 86 678899999999999998653 223332 34457888999 58899999999999999986542 223444
Q ss_pred ccCCC--CeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCc--ccEEEEEEcCCCCcEEEEEe----
Q psy4876 415 QNHTQ--EVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ--AAVKAIAWCPWSPNVLASGG---- 486 (609)
Q Consensus 415 ~~h~~--~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~--~~V~~l~~sp~~~~llasgg---- 486 (609)
..|.. .|+||+||+||++|++-+.|+++++||+++.+ +++....+-. -+-+.++|+|+. .|+++|.
T Consensus 359 ~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k-----kpL~~~tgL~t~~~~tdc~FSPd~-kli~TGtS~~~ 432 (641)
T KOG0772|consen 359 DAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK-----KPLNVRTGLPTPFPGTDCCFSPDD-KLILTGTSAPN 432 (641)
T ss_pred eccCCCCceeEEEeccccchhhhccCCCceeeeeccccc-----cchhhhcCCCccCCCCccccCCCc-eEEEecccccC
Confidence 56776 99999999999999999999999999999874 5666555433 245788999987 5777764
Q ss_pred ccCCCeEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 487 GTADRHIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
|...+.+.+||..+-..+..+... ..|..+.|+|.-+.+++++ .||.++||--+
T Consensus 433 ~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gs--gdG~~~vyYdp 487 (641)
T KOG0772|consen 433 GMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGS--GDGTAHVYYDP 487 (641)
T ss_pred CCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeec--CCCceEEEECc
Confidence 344678999999999999988765 4899999999999999954 68999988544
No 123
>KOG2106|consensus
Probab=99.88 E-value=7.4e-20 Score=185.66 Aligned_cols=273 Identities=20% Similarity=0.312 Sum_probs=215.8
Q ss_pred ceeEEEEEecCC--CeEEEEcCCeEEEEeCCCCCCCceEEecCCcccccccccccccccee-eeeeec--CCCCeEEEEE
Q psy4876 269 DYYLNLIDWSHF--NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAID-HLMDLE--GNENVCSVAW 343 (609)
Q Consensus 269 ~~~v~~l~wsp~--~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~--h~~~V~~v~~ 343 (609)
.-.|....|+|. +++.....+.+++|+.+. +.+. ....++ ....|.||+|
T Consensus 200 ne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~-------------------------~~l~k~~~~fek~ekk~Vl~v~F 254 (626)
T KOG2106|consen 200 NEVVFLATFHPTDPNLIITCGKGHLYFWTLRG-------------------------GSLVKRQGIFEKREKKFVLCVTF 254 (626)
T ss_pred cceEEEEEeccCCCcEEEEeCCceEEEEEccC-------------------------CceEEEeeccccccceEEEEEEE
Confidence 334778999996 588888889999999988 3332 222233 4578999999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCC--------------
Q psy4876 344 IQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSR-------------- 407 (609)
Q Consensus 344 spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~-------------- 407 (609)
.++|+. ++|.++|.|.||+..+.+..+....|.+.|.+++. +|.+| +|+.|..|..||-.-.
T Consensus 255 ~engdv-iTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~i 332 (626)
T KOG2106|consen 255 LENGDV-ITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIILWDDNYRKLRETELPEQFGPI 332 (626)
T ss_pred cCCCCE-EeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEe-ecCccceEEeccccccccccccCchhcCCe
Confidence 999975 57999999999999888877777799999999998 55555 5999999999983210
Q ss_pred --------C-----------------eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEee
Q psy4876 408 --------D-----------------HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL 462 (609)
Q Consensus 408 --------~-----------------~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~ 462 (609)
+ .......+|..+...++.+|+.+++++++.|+.+++|+ .. +++...
T Consensus 333 Rtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~------k~~wt~ 404 (626)
T KOG2106|consen 333 RTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DH------KLEWTK 404 (626)
T ss_pred eEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CC------ceeEEE
Confidence 0 00122346888999999999999999999999999999 22 343333
Q ss_pred cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 463 SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 463 ~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
. -..++.|+.|+|.| .++.| +..|...+.|+++...+.......++..+.|+|+|.+|++ |+.|+.|+||.+.
T Consensus 405 ~-~~d~~~~~~fhpsg--~va~G--t~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAv--gs~d~~iyiy~Vs 477 (626)
T KOG2106|consen 405 I-IEDPAECADFHPSG--VVAVG--TATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAV--GSHDNHIYIYRVS 477 (626)
T ss_pred E-ecCceeEeeccCcc--eEEEe--eccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEE--ecCCCeEEEEEEC
Confidence 2 35678899999988 66666 5899999999999777766666789999999999999999 6699999999986
Q ss_pred C-CceEEEE-eCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEc
Q psy4876 543 S-LVKVAEL-HGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583 (609)
Q Consensus 543 ~-~~~~~~l-~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl 583 (609)
. +.+.... +.|..+|+.+.|++|+++|.+-+.|-.|.+|.-
T Consensus 478 ~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~ 520 (626)
T KOG2106|consen 478 ANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKP 520 (626)
T ss_pred CCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEcc
Confidence 4 4444433 234489999999999999999999999999943
No 124
>KOG4328|consensus
Probab=99.88 E-value=2.5e-21 Score=194.60 Aligned_cols=284 Identities=17% Similarity=0.269 Sum_probs=213.0
Q ss_pred eEEEEEecCCC---eEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 271 YLNLIDWSHFN---VLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 271 ~v~~l~wsp~~---lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
.|.+++|+|.. ++| |...|.|-+||+.+.. .....+.-+. |..+|.++.|+|
T Consensus 188 Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~-----------------------~d~d~v~~f~~hs~~Vs~l~F~P 244 (498)
T KOG4328|consen 188 RITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQE-----------------------KDKDGVYLFTPHSGPVSGLKFSP 244 (498)
T ss_pred ceEEEEecccCcceEEEEccCCCcEEEEecCCCC-----------------------CccCceEEeccCCccccceEecC
Confidence 38899999962 454 5567999999996311 2222333344 899999999999
Q ss_pred CC-CEEEEEeCCCeEEEEeCCCCeeEE--EecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCC
Q psy4876 346 EG-YMLGVGTSLGTVQLWDVSAKKKCR--TMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQE 420 (609)
Q Consensus 346 dg-~~Lasgs~dg~I~iwd~~~~~~~~--~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~ 420 (609)
.. ..+++.+.||+|++-|++.+.... .+......+..+.| ....++.|..-|...+||+++.......+..|...
T Consensus 245 ~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kK 324 (498)
T KOG4328|consen 245 ANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKK 324 (498)
T ss_pred CChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcc
Confidence 76 788899999999999998764333 33334455666667 34566677777799999999988778888899999
Q ss_pred eEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC
Q psy4876 421 VCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS 499 (609)
Q Consensus 421 V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~ 499 (609)
|++|+++| ...+||+++.|++++|||++...... .++.....|...|.+..|+|.+..|+.++ .|..|+|||..
T Consensus 325 I~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~--sp~lst~~HrrsV~sAyFSPs~gtl~TT~---~D~~IRv~dss 399 (498)
T KOG4328|consen 325 ITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKA--SPFLSTLPHRRSVNSAYFSPSGGTLLTTC---QDNEIRVFDSS 399 (498)
T ss_pred cceeecCCCCchheeecccCcceeeeehhhhcCCC--CcceecccccceeeeeEEcCCCCceEeec---cCCceEEeecc
Confidence 99999999 45579999999999999999764322 13445557999999999999999977765 89999999983
Q ss_pred ----CCceeEEEcCCC------CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCC-CEEE-EEEeCCCC
Q psy4876 500 ----SGACLDSIDTKS------QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSA-RVLN-LAMSPDET 567 (609)
Q Consensus 500 ----t~~~~~~~~~~~------~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~-~V~~-l~~spdg~ 567 (609)
.-.+..++.+.. ......|.|+..++++ |..-..|-|||-..++.+.++.+... .|.+ ..|+|-+.
T Consensus 400 ~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~v--g~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~ 477 (498)
T KOG4328|consen 400 CISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVV--GRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRD 477 (498)
T ss_pred cccccCCccceeeccCcccccccchhheeCCCccEEEE--eccCcceeEEcCCCCEEeeeccCccccccccceeeccccc
Confidence 334455554432 3456789999999888 55777899999988888888765443 4444 47999888
Q ss_pred EEEEE-ECCCCEEEEEcC
Q psy4876 568 TVLSA-GADETLRLWKIF 584 (609)
Q Consensus 568 ~L~s~-s~Dg~I~iWdl~ 584 (609)
.+++| +.-|.|.||--.
T Consensus 478 ~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 478 TLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred ceeccCCccceEEEEecC
Confidence 55554 556788887543
No 125
>KOG4378|consensus
Probab=99.88 E-value=1.8e-21 Score=196.68 Aligned_cols=260 Identities=22% Similarity=0.350 Sum_probs=210.9
Q ss_pred EEEEEecCCC-eEE--EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCC
Q psy4876 272 LNLIDWSHFN-VLA--VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGY 348 (609)
Q Consensus 272 v~~l~wsp~~-lla--~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~ 348 (609)
++.+.|+..+ +++ .+.|..|++|.-... .+.+..+... ..+.-.||+......
T Consensus 37 ~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~-----------------------~~~Vp~~~k~-~gd~~~Cv~~~s~S~ 92 (673)
T KOG4378|consen 37 DFSFNWQRRNFLVVASMAGDKVMRIKEKDGK-----------------------TPEVPRVRKL-TGDNAFCVACASQSL 92 (673)
T ss_pred ceeeeccccceEEEeecCCceeEEEecccCC-----------------------CCccceeecc-ccchHHHHhhhhcce
Confidence 6779999987 444 344778999975541 0223333333 333555666666668
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEcc-CCCCeEEEE
Q psy4876 349 MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQN-HTQEVCGLK 425 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~-h~~~V~~l~ 425 (609)
|+++|+..+.|+|||++...+.+.+.+|...|+++.+| ..+|++++..|.|.|+.+.++. ....+.. ..+.|.-+.
T Consensus 93 y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~-~tt~f~~~sgqsvRll~ 171 (673)
T KOG4378|consen 93 YEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQ-KTTTFTIDSGQSVRLLR 171 (673)
T ss_pred eeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCc-cccceecCCCCeEEEee
Confidence 99999999999999999877888999999999999995 6899999999999999999874 3344443 356677899
Q ss_pred EccCCC-EEEEEeCCCcEEEEeCCCCCCCCCccceE-eecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCce
Q psy4876 426 WSPDGR-YLASGGNDNLLNIWSGVPGQHTFSTQPIH-SLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC 503 (609)
Q Consensus 426 ~spdg~-~lasgs~Dg~I~iwd~~~~~~~~~~~~~~-~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~ 503 (609)
|++..+ +|.+++.+|.|.+||+... .+++ -...|.++...|+|+|....||++-| .|..|.+||+.....
T Consensus 172 ys~skr~lL~~asd~G~VtlwDv~g~------sp~~~~~~~HsAP~~gicfspsne~l~vsVG--~Dkki~~yD~~s~~s 243 (673)
T KOG4378|consen 172 YSPSKRFLLSIASDKGAVTLWDVQGM------SPIFHASEAHSAPCRGICFSPSNEALLVSVG--YDKKINIYDIRSQAS 243 (673)
T ss_pred cccccceeeEeeccCCeEEEEeccCC------CcccchhhhccCCcCcceecCCccceEEEec--ccceEEEeecccccc
Confidence 999766 5677899999999999876 4444 34679999999999999999999886 999999999999888
Q ss_pred eEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC-CceEEEEeCCCCCEEEEEEeCCC
Q psy4876 504 LDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS-LVKVAELHGHSARVLNLAMSPDE 566 (609)
Q Consensus 504 ~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~-~~~~~~l~~h~~~V~~l~~spdg 566 (609)
...+....+...++|.++|.+|++ |...|.|..||++. ..++..+..|...|++++|-|..
T Consensus 244 ~~~l~y~~Plstvaf~~~G~~L~a--G~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 244 TDRLTYSHPLSTVAFSECGTYLCA--GNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred cceeeecCCcceeeecCCceEEEe--ecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 888888899999999999999999 77899999999986 45788889999999999998764
No 126
>KOG1408|consensus
Probab=99.88 E-value=8.8e-21 Score=198.68 Aligned_cols=285 Identities=18% Similarity=0.267 Sum_probs=213.3
Q ss_pred EEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeee-cCCCCeEEEEEccC----
Q psy4876 274 LIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDL-EGNENVCSVAWIQE---- 346 (609)
Q Consensus 274 ~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~h~~~V~~v~~spd---- 346 (609)
.+.|++.+ +..+-.|..+||||+..... .-....+ -|...|++|.--|.
T Consensus 329 A~~Fdet~~klscVYndhSlYvWDvrD~~k------------------------vgk~~s~lyHS~ciW~Ve~~p~nv~~ 384 (1080)
T KOG1408|consen 329 ACQFDETTDKLSCVYNDHSLYVWDVRDVNK------------------------VGKCSSMLYHSACIWDVENLPCNVHS 384 (1080)
T ss_pred EEEecCCCceEEEEEcCceEEEEecccccc------------------------ccceeeeeeccceeeeeccccccccC
Confidence 47788753 66678899999999987311 1111111 15555555554441
Q ss_pred -------CCEEEEEeCCCeEEEEeCCCCeeEEEe-------------------------------------cCCCCceEE
Q psy4876 347 -------GYMLGVGTSLGTVQLWDVSAKKKCRTM-------------------------------------DGHDVRVGA 382 (609)
Q Consensus 347 -------g~~Lasgs~dg~I~iwd~~~~~~~~~l-------------------------------------~~h~~~V~~ 382 (609)
...+++++.|++|++||++.+..-..+ -+....+.+
T Consensus 385 ~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~ 464 (1080)
T KOG1408|consen 385 PTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRA 464 (1080)
T ss_pred cccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEE
Confidence 124789999999999999753111100 012245677
Q ss_pred EEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEcc---CCCEEEEEeCCCcEEEEeCCCCCCCCCcc
Q psy4876 383 LAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP---DGRYLASGGNDNLLNIWSGVPGQHTFSTQ 457 (609)
Q Consensus 383 l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp---dg~~lasgs~Dg~I~iwd~~~~~~~~~~~ 457 (609)
++. ++.+|++|.+-|+|+||++... .....+..|..+|.|+.++. ..++||+++.|..|+|||+... ..
T Consensus 465 ~~vSp~gqhLAsGDr~GnlrVy~Lq~l-~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn-----y~ 538 (1080)
T KOG1408|consen 465 LAVSPDGQHLASGDRGGNLRVYDLQEL-EYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN-----YD 538 (1080)
T ss_pred EEECCCcceecccCccCceEEEEehhh-hhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc-----cc
Confidence 777 6899999999999999999876 46677889999999999986 4568999999999999999765 36
Q ss_pred ceEeecCCcccEEEEEEcCCCCc-EEEEEeccCCCeEEEEECCCCceeEEE------cCCCCeEEEEEcCCCCeEEEEEe
Q psy4876 458 PIHSLSRHQAAVKAIAWCPWSPN-VLASGGGTADRHIYFWNVSSGACLDSI------DTKSQVCALLWNSDYKELVSAHG 530 (609)
Q Consensus 458 ~~~~~~~h~~~V~~l~~sp~~~~-llasggGs~Dg~I~iwd~~t~~~~~~~------~~~~~v~sl~~s~~g~~l~~~sG 530 (609)
++.++.+|...|+++.|.-.|.+ -++++| .|+.|.+--.+.......+ ..+..+..++..|..+++++++
T Consensus 539 l~qtld~HSssITsvKFa~~gln~~MiscG--ADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c- 615 (1080)
T KOG1408|consen 539 LVQTLDGHSSSITSVKFACNGLNRKMISCG--ADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC- 615 (1080)
T ss_pred hhhhhcccccceeEEEEeecCCceEEEecc--CchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe-
Confidence 78899999999999999877632 344443 6877765433321111111 1245789999999999999965
Q ss_pred cCCCeEEEEECCCCceEEEEeC---CCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhh
Q psy4876 531 FAQNQLIIWKYPSLVKVAELHG---HSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKK 592 (609)
Q Consensus 531 ~~dg~I~Iwd~~~~~~~~~l~~---h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~ 592 (609)
.|..|+||++.+++..+.|++ |++....+...|.|-||++.+.|.+|.|+|+..++....-
T Consensus 616 -QDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m 679 (1080)
T KOG1408|consen 616 -QDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQM 679 (1080)
T ss_pred -cccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhh
Confidence 899999999999999999965 6778889999999999999999999999999999876543
No 127
>KOG1273|consensus
Probab=99.88 E-value=7.7e-21 Score=182.88 Aligned_cols=279 Identities=17% Similarity=0.248 Sum_probs=211.5
Q ss_pred EEEEEecCCC-eEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCE
Q psy4876 272 LNLIDWSHFN-VLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYM 349 (609)
Q Consensus 272 v~~l~wsp~~-lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~ 349 (609)
-+|+.|++.| +|| |+.||.|.|||..+ ..+..+..- |..+|++++||+||+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T-------------------------~~iar~lsa-H~~pi~sl~WS~dgr~ 79 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDT-------------------------FRIARMLSA-HVRPITSLCWSRDGRK 79 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccc-------------------------cchhhhhhc-cccceeEEEecCCCCE
Confidence 5789999987 444 77899999999988 443332222 8999999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecC---CEEEEEecCCeEEEEEcCCCCeeEEEEccC---CCCeEE
Q psy4876 350 LGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT---YILSSGSRCGNIVHHDVRSRDHKVALLQNH---TQEVCG 423 (609)
Q Consensus 350 Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~---~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h---~~~V~~ 423 (609)
|++++.|..|.+||+..|.+++.+. ...+|+...|++ +..++.-.+..-.+-++..+.+.+...... ...-.+
T Consensus 80 LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~ 158 (405)
T KOG1273|consen 80 LLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASH 158 (405)
T ss_pred eeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCcccccccccc
Confidence 9999999999999999999988887 778999999953 344444334445555555432222221111 112223
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCc-ccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC-
Q psy4876 424 LKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ-AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG- 501 (609)
Q Consensus 424 l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~-~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~- 501 (609)
..|.+.|+++++|...|.+.++|..+. +++..+.... ..|+.+.++-.|..++.- +.|+.|+.|++..-
T Consensus 159 ~~fdr~g~yIitGtsKGkllv~~a~t~------e~vas~rits~~~IK~I~~s~~g~~liiN---tsDRvIR~ye~~di~ 229 (405)
T KOG1273|consen 159 GVFDRRGKYIITGTSKGKLLVYDAETL------ECVASFRITSVQAIKQIIVSRKGRFLIIN---TSDRVIRTYEISDID 229 (405)
T ss_pred ccccCCCCEEEEecCcceEEEEecchh------eeeeeeeechheeeeEEEEeccCcEEEEe---cCCceEEEEehhhhc
Confidence 468899999999999999999999987 6666665554 789999999988766665 47999999998621
Q ss_pred ------cee--EEE---cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCC-CCEEEEEEeCCCCEE
Q psy4876 502 ------ACL--DSI---DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHS-ARVLNLAMSPDETTV 569 (609)
Q Consensus 502 ------~~~--~~~---~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~-~~V~~l~~spdg~~L 569 (609)
+.. +.+ -...+-.+++|+.+|.|+++++ .....++||.-..|..++.+.|.. ....++.|+|-...|
T Consensus 230 ~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s-~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i 308 (405)
T KOG1273|consen 230 DEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGS-ARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPII 308 (405)
T ss_pred ccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEecc-ccceeEEEEecCCcceeeeecCCchhheeecccccceeee
Confidence 111 111 1223567899999999999876 477889999999999999999877 668899999999988
Q ss_pred EEEECCCCEEEEEcCCCcc
Q psy4876 570 LSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 570 ~s~s~Dg~I~iWdl~~~~~ 588 (609)
++- +.|.|+||.....+.
T Consensus 309 ~si-~sg~v~iw~~~~~en 326 (405)
T KOG1273|consen 309 ASI-ASGVVYIWAVVQVEN 326 (405)
T ss_pred eec-cCCceEEEEeecccc
Confidence 888 779999999876554
No 128
>KOG0270|consensus
Probab=99.88 E-value=4.7e-21 Score=192.12 Aligned_cols=246 Identities=24% Similarity=0.426 Sum_probs=190.5
Q ss_pred CCeEEEEEccC-------CCEEEEEeCCCeEEEEeCCCCee---------------------EEEecCCCCceEEEEec-
Q psy4876 336 ENVCSVAWIQE-------GYMLGVGTSLGTVQLWDVSAKKK---------------------CRTMDGHDVRVGALAWN- 386 (609)
Q Consensus 336 ~~V~~v~~spd-------g~~Lasgs~dg~I~iwd~~~~~~---------------------~~~l~~h~~~V~~l~~~- 386 (609)
....|++|... |+|+|+|+.|..|.|||+.-... -....+|+..|..++|+
T Consensus 174 afPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~ 253 (463)
T KOG0270|consen 174 AFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNR 253 (463)
T ss_pred CcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcc
Confidence 34457777432 58999999999999999863110 11234699999999996
Q ss_pred --CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec
Q psy4876 387 --TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS 463 (609)
Q Consensus 387 --~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~ 463 (609)
.++|++|+.|.+|++||+.++ .+..++..|+..|.++.|+| ...+|++|+.|++|.+.|.+... .....-
T Consensus 254 ~~~nVLaSgsaD~TV~lWD~~~g-~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~------~s~~~w 326 (463)
T KOG0270|consen 254 NFRNVLASGSADKTVKLWDVDTG-KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPS------NSGKEW 326 (463)
T ss_pred ccceeEEecCCCceEEEEEcCCC-CcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcc------ccCceE
Confidence 589999999999999999998 47788888999999999999 67789999999999999999532 111111
Q ss_pred CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC-CceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 464 RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS-GACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 464 ~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t-~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
.-.+.|..++|.|...+.++++ +.||+|+-+|++. ++++.++..| ..|.+++++..-..+++. ++.++.|++|++
T Consensus 327 k~~g~VEkv~w~~~se~~f~~~--tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t-~s~d~~Vklw~~ 403 (463)
T KOG0270|consen 327 KFDGEVEKVAWDPHSENSFFVS--TDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLST-ASTDKVVKLWKF 403 (463)
T ss_pred EeccceEEEEecCCCceeEEEe--cCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceee-ccccceEEEEee
Confidence 2356799999999998888886 5999999999995 4888888765 599999999998887776 558999999998
Q ss_pred CCCce--EEEEeCCCCCEEEEEEeCCCC-EEEEEECCCCEEEEEcCCCccchh
Q psy4876 542 PSLVK--VAELHGHSARVLNLAMSPDET-TVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 542 ~~~~~--~~~l~~h~~~V~~l~~spdg~-~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
..-.. +..-.-.-++..|.++.|+-. +++.||..+.++|||+.+.....+
T Consensus 404 ~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~k 456 (463)
T KOG0270|consen 404 DVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVRK 456 (463)
T ss_pred cCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhHHH
Confidence 64332 211111124566777778654 667788888899999998776544
No 129
>KOG0269|consensus
Probab=99.88 E-value=5.7e-22 Score=210.07 Aligned_cols=243 Identities=20% Similarity=0.373 Sum_probs=193.6
Q ss_pred eeEEEEEecCC--Ce-EEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 270 YYLNLIDWSHF--NV-LAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 270 ~~v~~l~wsp~--~l-la~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
+.++.|.|+.- ++ ++++..|.|.+||+... .+-..+..+. |...|.++.|++
T Consensus 88 ~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~------------------------~rnk~l~~f~EH~Rs~~~ldfh~ 143 (839)
T KOG0269|consen 88 YSAADVKWGQLYSNLIATCSTNGVISVWDLNKS------------------------IRNKLLTVFNEHERSANKLDFHS 143 (839)
T ss_pred eehhhcccccchhhhheeecCCCcEEEEecCcc------------------------ccchhhhHhhhhccceeeeeecc
Confidence 34667899853 44 45777899999999761 2233444555 999999999998
Q ss_pred CC-CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCe
Q psy4876 346 EG-YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEV 421 (609)
Q Consensus 346 dg-~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V 421 (609)
.. .+|++|+.||.|++||++..+...++.+....|..+.|. ++.|+++...|.+.+||++........+.+|.++|
T Consensus 144 tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV 223 (839)
T KOG0269|consen 144 TEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPV 223 (839)
T ss_pred CCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCce
Confidence 65 899999999999999999999999999999999999994 68999999999999999999888888899999999
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC
Q psy4876 422 CGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG 501 (609)
Q Consensus 422 ~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~ 501 (609)
.|+.|+|++.+||+||.|++|+|||..+... .++.++. ...+|.+|.|-|...+.|+++.--.|-.|+|||++..
T Consensus 224 ~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~----~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 224 LCLNWHPNREWLATGGRDKMVKIWDMTDSRA----KPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP 298 (839)
T ss_pred EEEeecCCCceeeecCCCccEEEEeccCCCc----cceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccc
Confidence 9999999999999999999999999987632 3444443 3578999999999999998876446899999999854
Q ss_pred c-eeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 502 A-CLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 502 ~-~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
- +..++..| ..++.++|......++.. ++.|+.|..-.++
T Consensus 299 YIP~~t~~eH~~~vt~i~W~~~d~~~l~s-~sKD~tv~qh~~k 340 (839)
T KOG0269|consen 299 YIPYATFLEHTDSVTGIAWDSGDRINLWS-CSKDGTVLQHLFK 340 (839)
T ss_pred cccceeeeccCccccceeccCCCceeeEe-ecCccHHHHhhhh
Confidence 3 44555554 467888887643333332 3467766554433
No 130
>KOG0301|consensus
Probab=99.88 E-value=4.5e-21 Score=201.18 Aligned_cols=236 Identities=26% Similarity=0.404 Sum_probs=202.4
Q ss_pred eeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeE--EEecCCCCceEE-EEe---cCCEEEEEecCCeEE
Q psy4876 328 HLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKC--RTMDGHDVRVGA-LAW---NTYILSSGSRCGNIV 400 (609)
Q Consensus 328 ~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~--~~l~~h~~~V~~-l~~---~~~~L~sgs~dg~I~ 400 (609)
..+++. |...|..++..++. .+++++.||++++|+-..++.+ ..+.+|.+.|.. +++ ++..|++|+.|.+|.
T Consensus 6 ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~ 84 (745)
T KOG0301|consen 6 LSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTII 84 (745)
T ss_pred eEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEE
Confidence 344556 88899888877554 7888999999999998665544 346677777776 777 346799999999999
Q ss_pred EEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCc
Q psy4876 401 HHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPN 480 (609)
Q Consensus 401 iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 480 (609)
+|...+. .+..++.+|...||++....++. +++|+.|.++++|-.. ++...+.+|+..|.+++.-|.+
T Consensus 85 v~~~~~~-~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~--------~l~~~l~gH~asVWAv~~l~e~-- 152 (745)
T KOG0301|consen 85 VFKLSQA-EPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG--------ELVYSLQGHTASVWAVASLPEN-- 152 (745)
T ss_pred EEecCCC-CchhhhhccccceeeeecCCcCc-eEecccccceEEecch--------hhhcccCCcchheeeeeecCCC--
Confidence 9999987 58899999999999999888887 9999999999999875 5667799999999999999976
Q ss_pred EEEEEeccCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEE
Q psy4876 481 VLASGGGTADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLN 559 (609)
Q Consensus 481 llasggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~ 559 (609)
.+++| +.|+.|++|.- +++++++.+|. -|+.+++-+++.++-+ + .||.|++|++ +++++.++.+|+.-|.+
T Consensus 153 ~~vTg--saDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flSc--s-NDg~Ir~w~~-~ge~l~~~~ghtn~vYs 224 (745)
T KOG0301|consen 153 TYVTG--SADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSC--S-NDGSIRLWDL-DGEVLLEMHGHTNFVYS 224 (745)
T ss_pred cEEec--cCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEee--c-CCceEEEEec-cCceeeeeeccceEEEE
Confidence 67776 48999999985 78889998775 7999999998776654 2 7999999999 89999999999999999
Q ss_pred EEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 560 LAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 560 l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
++...++..++++|+|++++||+..
T Consensus 225 is~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 225 ISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred EEecCCCCeEEEecCCceEEEeecC
Confidence 9988889999999999999999987
No 131
>KOG0267|consensus
Probab=99.88 E-value=1.2e-22 Score=213.61 Aligned_cols=231 Identities=22% Similarity=0.384 Sum_probs=208.4
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
|...|.++..-..++.+++|+.|..+-+|.+.....+..+.+|..+|.++.|+ ..+|++|+.+|+|++||+... +.+
T Consensus 27 hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeA-k~v 105 (825)
T KOG0267|consen 27 HSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEA-KIV 105 (825)
T ss_pred hhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhh-hhh
Confidence 77888888887778999999999999999998888888899999999999995 678999999999999999986 578
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
+++.+|...++++.|+|-+.++|+|+.|..+.+||++.. .+.+.+.+|...|..+.|+|+| .+++.|+ .|.
T Consensus 106 rtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~------Gc~~~~~s~~~vv~~l~lsP~G-r~v~~g~--ed~ 176 (825)
T KOG0267|consen 106 RTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKK------GCSHTYKSHTRVVDVLRLSPDG-RWVASGG--EDN 176 (825)
T ss_pred hhhhccccCcceeeeccceEEeccccccccceehhhhcc------CceeeecCCcceeEEEeecCCC-ceeeccC--Ccc
Confidence 899999999999999999999999999999999999965 6889999999999999999998 4667764 799
Q ss_pred eEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEE
Q psy4876 492 HIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVL 570 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~ 570 (609)
.++|||+..|+.+..|..+ ..+.++.|+|..-+++. |+.|++|++||+++.+.+.........|.+++|+|++..++
T Consensus 177 tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~--Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~ 254 (825)
T KOG0267|consen 177 TVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAP--GSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVL 254 (825)
T ss_pred eeeeecccccccccccccccccccccccCchhhhhcc--CCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeee
Confidence 9999999999999999855 58999999998877777 77999999999999999988888889999999999999988
Q ss_pred EEECCC
Q psy4876 571 SAGADE 576 (609)
Q Consensus 571 s~s~Dg 576 (609)
+|..+.
T Consensus 255 ~G~q~s 260 (825)
T KOG0267|consen 255 SGEQIS 260 (825)
T ss_pred cCchhh
Confidence 886653
No 132
>KOG0300|consensus
Probab=99.87 E-value=7.3e-21 Score=182.85 Aligned_cols=252 Identities=15% Similarity=0.300 Sum_probs=212.3
Q ss_pred ceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEE
Q psy4876 325 AIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVH 401 (609)
Q Consensus 325 ~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~i 401 (609)
....+.++. |.+.|..++-......+.+++.|.+.+||.++++.++..+.+|.+.|.+|.|+ +.++++++.|++-.|
T Consensus 137 ~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHI 216 (481)
T KOG0300|consen 137 KFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHI 216 (481)
T ss_pred eEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHH
Confidence 344555666 99999999998888899999999999999999999999999999999999994 689999999999999
Q ss_pred EEc------CCC---------------------------------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcE
Q psy4876 402 HDV------RSR---------------------------------DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLL 442 (609)
Q Consensus 402 wd~------~~~---------------------------------~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I 442 (609)
|.. ... ..++..+.+|...|.+..|...|+.+++++.|.+.
T Consensus 217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTA 296 (481)
T KOG0300|consen 217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTA 296 (481)
T ss_pred HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccc
Confidence 962 110 02345677899999999999999999999999999
Q ss_pred EEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC-ceeEEEcCC-CCeEEEEEcC
Q psy4876 443 NIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG-ACLDSIDTK-SQVCALLWNS 520 (609)
Q Consensus 443 ~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~-~~~~~~~~~-~~v~sl~~s~ 520 (609)
.+||++++ .++..+.+|....+.++-+|.+ .|+++. +.|.+.++||.+.. ..+..|.++ ..|+++.|..
T Consensus 297 nlwDVEtg------e~v~~LtGHd~ELtHcstHptQ-rLVvTs--SrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~ 367 (481)
T KOG0300|consen 297 NLWDVETG------EVVNILTGHDSELTHCSTHPTQ-RLVVTS--SRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNT 367 (481)
T ss_pred eeeeeccC------ceeccccCcchhccccccCCcc-eEEEEe--ccCceeEeccchhhcceeeeecccccceeEEEEec
Confidence 99999999 8999999999999999999977 566665 58999999999832 345666666 4899999998
Q ss_pred CCCeEEEEEecCCCeEEEEECCCCc-eEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccc
Q psy4876 521 DYKELVSAHGFAQNQLIIWKYPSLV-KVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 521 ~g~~l~~~sG~~dg~I~Iwd~~~~~-~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
+.+.+ + |++|.+|+|||++++. ++.+++ ...+++.++.+..++.|+.--.+..|++||+.+....
T Consensus 368 dd~vV-S--gSDDrTvKvWdLrNMRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~Rla 433 (481)
T KOG0300|consen 368 DDRVV-S--GSDDRTVKVWDLRNMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLA 433 (481)
T ss_pred CCcee-e--cCCCceEEEeeeccccCcceeee-cCCccceeEeecCCceEEeccCCceEEEEecCCCccc
Confidence 87653 3 7799999999998875 455554 5578899999988888888888899999999876543
No 133
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.87 E-value=2.4e-19 Score=183.18 Aligned_cols=253 Identities=13% Similarity=0.094 Sum_probs=185.4
Q ss_pred EEEEEecCCC--eE-EEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCC
Q psy4876 272 LNLIDWSHFN--VL-AVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGY 348 (609)
Q Consensus 272 v~~l~wsp~~--ll-a~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~ 348 (609)
+..++|+|++ ++ +++.++.|++||..+ +.... .+.....+..++|+|+++
T Consensus 33 ~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~-------------------------~~~~~--~~~~~~~~~~~~~~~~g~ 85 (300)
T TIGR03866 33 PRGITLSKDGKLLYVCASDSDTIQVIDLAT-------------------------GEVIG--TLPSGPDPELFALHPNGK 85 (300)
T ss_pred CCceEECCCCCEEEEEECCCCeEEEEECCC-------------------------CcEEE--eccCCCCccEEEECCCCC
Confidence 3468999986 33 345679999999987 44322 233223456889999998
Q ss_pred EEEEE-eCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCC-eEEEEEcCCCCeeEEEEccCCCCeEEE
Q psy4876 349 MLGVG-TSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCG-NIVHHDVRSRDHKVALLQNHTQEVCGL 424 (609)
Q Consensus 349 ~Lasg-s~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg-~I~iwd~~~~~~~~~~~~~h~~~V~~l 424 (609)
.++++ ..++.|.+||+.+++.+..+.. ...+.+++| ++.+++++..++ .+.+||..+.. ...... ....+.++
T Consensus 86 ~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~-~~~~~~-~~~~~~~~ 162 (300)
T TIGR03866 86 ILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYE-IVDNVL-VDQRPRFA 162 (300)
T ss_pred EEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCe-EEEEEE-cCCCccEE
Confidence 77665 4689999999998887777763 334577888 578888888765 46778988763 333322 23456789
Q ss_pred EEccCCCEEEEE-eCCCcEEEEeCCCCCCCCCccceEeecCC-------cccEEEEEEcCCCCcEEEEEeccCCCeEEEE
Q psy4876 425 KWSPDGRYLASG-GNDNLLNIWSGVPGQHTFSTQPIHSLSRH-------QAAVKAIAWCPWSPNVLASGGGTADRHIYFW 496 (609)
Q Consensus 425 ~~spdg~~lasg-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~h-------~~~V~~l~~sp~~~~llasggGs~Dg~I~iw 496 (609)
+|+++|++|+++ ..++.|++||+.++ +.+..+..+ ......++|+|++..++++.+ .++.|.+|
T Consensus 163 ~~s~dg~~l~~~~~~~~~v~i~d~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~--~~~~i~v~ 234 (300)
T TIGR03866 163 EFTADGKELWVSSEIGGTVSVIDVATR------KVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALG--PANRVAVV 234 (300)
T ss_pred EECCCCCEEEEEcCCCCEEEEEEcCcc------eeeeeeeecccccccccCCccceEECCCCCEEEEEcC--CCCeEEEE
Confidence 999999988654 46899999999987 333333211 112346889999987666543 46789999
Q ss_pred ECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeC
Q psy4876 497 NVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSP 564 (609)
Q Consensus 497 d~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~sp 564 (609)
|+.+++.+..+.....+.+++|+|+|++|+++. ..++.|.|||..+++.+..+... ...+.++++|
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~ 300 (300)
T TIGR03866 235 DAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTN-GVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP 300 (300)
T ss_pred ECCCCcEEEEEEeCCCcceEEECCCCCEEEEEc-CCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence 999998887766667899999999999998753 36899999999999999998754 5558888875
No 134
>KOG0307|consensus
Probab=99.87 E-value=9e-22 Score=217.18 Aligned_cols=258 Identities=21% Similarity=0.343 Sum_probs=206.7
Q ss_pred eeeeeecCCCCeEEEEEccCCCE----EEEEeCCCeEEEEeCCC---C---eeEEEecCCCCceEEEEec---CCEEEEE
Q psy4876 327 DHLMDLEGNENVCSVAWIQEGYM----LGVGTSLGTVQLWDVSA---K---KKCRTMDGHDVRVGALAWN---TYILSSG 393 (609)
Q Consensus 327 ~~l~~~~h~~~V~~v~~spdg~~----Lasgs~dg~I~iwd~~~---~---~~~~~l~~h~~~V~~l~~~---~~~L~sg 393 (609)
.....+........++|.+.|.. ||.|..||.|.+||... + ..+.+...|.+.|..+.|| +++|++|
T Consensus 56 k~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASG 135 (1049)
T KOG0307|consen 56 KPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASG 135 (1049)
T ss_pred cccccccccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeecc
Confidence 44444545677889999998755 88899999999999865 2 3466778899999999996 6799999
Q ss_pred ecCCeEEEEEcCCCCeeEEE-EccCCCCeEEEEEccC-CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcc--cE
Q psy4876 394 SRCGNIVHHDVRSRDHKVAL-LQNHTQEVCGLKWSPD-GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQA--AV 469 (609)
Q Consensus 394 s~dg~I~iwd~~~~~~~~~~-~~~h~~~V~~l~~spd-g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~--~V 469 (609)
+.||.|.|||+...+..... -....+.|.+++|+.. ...||+++.+|.+.|||++.. +++..+..+.+ .+
T Consensus 136 a~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~------~pii~ls~~~~~~~~ 209 (1049)
T KOG0307|consen 136 ADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKK------KPIIKLSDTPGRMHC 209 (1049)
T ss_pred CCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCC------CcccccccCCCccce
Confidence 99999999999876433322 2235678999999984 456899999999999999987 66777766654 47
Q ss_pred EEEEEcCCCCcEEEEEecc-CCCeEEEEECCC-CceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCce
Q psy4876 470 KAIAWCPWSPNVLASGGGT-ADRHIYFWNVSS-GACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVK 546 (609)
Q Consensus 470 ~~l~~sp~~~~llasggGs-~Dg~I~iwd~~t-~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~ 546 (609)
..|+|+|+...-++++.++ ..-.|.+||++. ...++.+.+| ..|.++.|++.+..++..+| .|+.|.+|+..+++.
T Consensus 210 S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsg-kD~~ii~wN~~tgEv 288 (1049)
T KOG0307|consen 210 SVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSG-KDNRIICWNPNTGEV 288 (1049)
T ss_pred eeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhccc-CCCCeeEecCCCceE
Confidence 8899999988777666421 235799999984 4567777655 48999999999865555555 899999999999999
Q ss_pred EEEEeCCCCCEEEEEEeCCCC-EEEEEECCCCEEEEEcCCCccchh
Q psy4876 547 VAELHGHSARVLNLAMSPDET-TVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 547 ~~~l~~h~~~V~~l~~spdg~-~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
+.++.....++..+.|.|... .++.++-||.|-|+.+.+......
T Consensus 289 l~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~~~~~ 334 (1049)
T KOG0307|consen 289 LGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTDTDLV 334 (1049)
T ss_pred eeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCCccch
Confidence 999988889999999999766 778889999999999998774443
No 135
>KOG0267|consensus
Probab=99.86 E-value=3.1e-22 Score=210.57 Aligned_cols=220 Identities=25% Similarity=0.465 Sum_probs=192.1
Q ss_pred eEEEEEecCC--CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 271 YLNLIDWSHF--NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 271 ~v~~l~wsp~--~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
+|+++..-.. -++.|+.|..+-||.+.. ...+..+. |...|.+|.|+++.
T Consensus 30 av~~lk~~~s~r~~~~Gg~~~k~~L~~i~k---------------------------p~~i~S~~~hespIeSl~f~~~E 82 (825)
T KOG0267|consen 30 AVGCLKIRKSSRSLVTGGEDEKVNLWAIGK---------------------------PNAITSLTGHESPIESLTFDTSE 82 (825)
T ss_pred hhceeeeeccceeeccCCCceeeccccccC---------------------------CchhheeeccCCcceeeecCcch
Confidence 4555554222 266688888999998854 33444455 99999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
.+|++|+.+|+|++||++.++.++++.+|...+..+.|+ +.++++|+.|+.+.+||++..+ +...+.+|...|..+.
T Consensus 83 ~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~G-c~~~~~s~~~vv~~l~ 161 (825)
T KOG0267|consen 83 RLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKG-CSHTYKSHTRVVDVLR 161 (825)
T ss_pred hhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccC-ceeeecCCcceeEEEe
Confidence 999999999999999999999999999999999999997 4677889999999999999764 8889999999999999
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD 505 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~ 505 (609)
|+|+|+++++|++|..++|||+..| +.+..|..|.+.+..+.|+|.. .|++.| +.|+++++||+++-+.+.
T Consensus 162 lsP~Gr~v~~g~ed~tvki~d~~ag------k~~~ef~~~e~~v~sle~hp~e-~Lla~G--s~d~tv~f~dletfe~I~ 232 (825)
T KOG0267|consen 162 LSPDGRWVASGGEDNTVKIWDLTAG------KLSKEFKSHEGKVQSLEFHPLE-VLLAPG--SSDRTVRFWDLETFEVIS 232 (825)
T ss_pred ecCCCceeeccCCcceeeeeccccc------ccccccccccccccccccCchh-hhhccC--CCCceeeeeccceeEEee
Confidence 9999999999999999999999988 7888999999999999999965 677776 499999999999888887
Q ss_pred EEcCC-CCeEEEEEcCCCCeEEE
Q psy4876 506 SIDTK-SQVCALLWNSDYKELVS 527 (609)
Q Consensus 506 ~~~~~-~~v~sl~~s~~g~~l~~ 527 (609)
..... ..|.+..|++++..+++
T Consensus 233 s~~~~~~~v~~~~fn~~~~~~~~ 255 (825)
T KOG0267|consen 233 SGKPETDGVRSLAFNPDGKIVLS 255 (825)
T ss_pred ccCCccCCceeeeecCCceeeec
Confidence 77654 58999999999999887
No 136
>KOG4283|consensus
Probab=99.86 E-value=1.4e-20 Score=179.52 Aligned_cols=219 Identities=23% Similarity=0.366 Sum_probs=178.0
Q ss_pred CCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCe----------eEE-----EecCCCCceEEEEe---cCCEEEEEe
Q psy4876 334 GNENVCSVAWIQ-EGYMLGVGTSLGTVQLWDVSAKK----------KCR-----TMDGHDVRVGALAW---NTYILSSGS 394 (609)
Q Consensus 334 h~~~V~~v~~sp-dg~~Lasgs~dg~I~iwd~~~~~----------~~~-----~l~~h~~~V~~l~~---~~~~L~sgs 394 (609)
|.+.|.++...+ .|+|+++|+.||.|.|||++... .+. .-.+|.-.|..+.| +..++.+++
T Consensus 42 HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssS 121 (397)
T KOG4283|consen 42 HGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSS 121 (397)
T ss_pred CCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeeccc
Confidence 889999999988 57999999999999999997532 111 12368889999999 678999999
Q ss_pred cCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEcc---CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEE
Q psy4876 395 RCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP---DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKA 471 (609)
Q Consensus 395 ~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp---dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~ 471 (609)
.|.+++|||..+.+ ....++ ..+.|.+-+|+| .--++|+|..|-.|++-|+.+| ...+.+.+|...|.+
T Consensus 122 FDhtlKVWDtnTlQ-~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG------s~sH~LsGHr~~vla 193 (397)
T KOG4283|consen 122 FDHTLKVWDTNTLQ-EAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG------SFSHTLSGHRDGVLA 193 (397)
T ss_pred ccceEEEeecccce-eeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCC------cceeeeccccCceEE
Confidence 99999999999874 444443 567788889998 3457899999999999999999 788999999999999
Q ss_pred EEEcCCCCcEEEEEeccCCCeEEEEECCCC-ceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCce---E
Q psy4876 472 IAWCPWSPNVLASGGGTADRHIYFWNVSSG-ACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVK---V 547 (609)
Q Consensus 472 l~~sp~~~~llasggGs~Dg~I~iwd~~t~-~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~---~ 547 (609)
+.|+|...++|++|+ .||.|++||++.. .|...++ ...++. +
T Consensus 194 V~Wsp~~e~vLatgs--aDg~irlWDiRrasgcf~~lD--------------------------------~hn~k~~p~~ 239 (397)
T KOG4283|consen 194 VEWSPSSEWVLATGS--ADGAIRLWDIRRASGCFRVLD--------------------------------QHNTKRPPIL 239 (397)
T ss_pred EEeccCceeEEEecC--CCceEEEEEeecccceeEEee--------------------------------cccCccCccc
Confidence 999999999999984 8999999999843 3433333 222221 1
Q ss_pred EEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 548 AELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 548 ~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
..-..|.+.|..++|+.||.++++++.|..+++|+...+....+...
T Consensus 240 ~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g 286 (397)
T KOG4283|consen 240 KTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFG 286 (397)
T ss_pred cccccccceeeeeeecccchhhhhccCccceEEeecccCcccccccc
Confidence 22347999999999999999999999999999999998887655443
No 137
>KOG2048|consensus
Probab=99.86 E-value=6.3e-19 Score=184.95 Aligned_cols=281 Identities=23% Similarity=0.358 Sum_probs=216.4
Q ss_pred EEEEEecCC-CeEEE-EcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCE
Q psy4876 272 LNLIDWSHF-NVLAV-ALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYM 349 (609)
Q Consensus 272 v~~l~wsp~-~lla~-s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~ 349 (609)
|.+|+++.+ +.||+ -.+|.|.||++..+ --.+.+.....+..|.+++|++ |..
T Consensus 28 I~slA~s~kS~~lAvsRt~g~IEiwN~~~~------------------------w~~~~vi~g~~drsIE~L~W~e-~~R 82 (691)
T KOG2048|consen 28 IVSLAYSHKSNQLAVSRTDGNIEIWNLSNN------------------------WFLEPVIHGPEDRSIESLAWAE-GGR 82 (691)
T ss_pred eEEEEEeccCCceeeeccCCcEEEEccCCC------------------------ceeeEEEecCCCCceeeEEEcc-CCe
Confidence 678999876 55664 46899999999871 1223334444788999999994 556
Q ss_pred EEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeE-EEEccCCCCeEEEEE
Q psy4876 350 LGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKV-ALLQNHTQEVCGLKW 426 (609)
Q Consensus 350 Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~-~~~~~h~~~V~~l~~ 426 (609)
|.+.+.+|.|.-||+.+++....+....+.|++++.+ +..++.|+.||.+..++...+.-.. ..+...++.|.+++|
T Consensus 83 LFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw 162 (691)
T KOG2048|consen 83 LFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSW 162 (691)
T ss_pred EEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEe
Confidence 7778888999999999999999999999999999995 6899999999977777776653211 223445689999999
Q ss_pred ccCCCEEEEEeCCCcEEEEeCCCCCCCCC-ccceEeecC-CcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCcee
Q psy4876 427 SPDGRYLASGGNDNLLNIWSGVPGQHTFS-TQPIHSLSR-HQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 427 spdg~~lasgs~Dg~I~iwd~~~~~~~~~-~~~~~~~~~-h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~ 504 (609)
+|++..+++|+.||.|++||...+..... ...+..+.. ...-|.++.|-.++ .+++| ..-|+|.+||...+.++
T Consensus 163 ~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~--tI~sg--DS~G~V~FWd~~~gTLi 238 (691)
T KOG2048|consen 163 NPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS--TIASG--DSAGTVTFWDSIFGTLI 238 (691)
T ss_pred cCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC--cEEEe--cCCceEEEEcccCcchh
Confidence 99999999999999999999998832110 000111111 33457788887654 67776 57899999999999999
Q ss_pred EEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCce----EEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEE
Q psy4876 505 DSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVK----VAELHGHSARVLNLAMSPDETTVLSAGADETLR 579 (609)
Q Consensus 505 ~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~----~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~ 579 (609)
+++..+ ..|.+++..+++..++++ +.|+.|..|...+... ......|...|.+++..++ .|++||.|.++.
T Consensus 239 qS~~~h~adVl~Lav~~~~d~vfsa--Gvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~ 314 (691)
T KOG2048|consen 239 QSHSCHDADVLALAVADNEDRVFSA--GVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLA 314 (691)
T ss_pred hhhhhhhcceeEEEEcCCCCeEEEc--cCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEE
Confidence 998755 689999999999999985 3799998888765533 2233568888999999877 899999999998
Q ss_pred EEEcCC
Q psy4876 580 LWKIFE 585 (609)
Q Consensus 580 iWdl~~ 585 (609)
+-....
T Consensus 315 i~~s~~ 320 (691)
T KOG2048|consen 315 ICSSRE 320 (691)
T ss_pred Eccccc
Confidence 876655
No 138
>KOG0639|consensus
Probab=99.85 E-value=1.3e-20 Score=190.73 Aligned_cols=239 Identities=15% Similarity=0.237 Sum_probs=202.1
Q ss_pred CccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEE
Q psy4876 264 PEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCS 340 (609)
Q Consensus 264 p~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~ 340 (609)
+.+..+-|+.++...||+ +|++|...+|.|||+.. .....-.++. ..-.+.+
T Consensus 460 dcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAa-------------------------pTprikaeltssapaCyA 514 (705)
T KOG0639|consen 460 DCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAA-------------------------PTPRIKAELTSSAPACYA 514 (705)
T ss_pred cccCcccceeeeEecCCCceEEeccccceeeeeeccC-------------------------CCcchhhhcCCcchhhhh
Confidence 345557889999999996 88899999999999987 3333333443 3456788
Q ss_pred EEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCC
Q psy4876 341 VAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHT 418 (609)
Q Consensus 341 v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~ 418 (609)
++.+||.+..++++.||.|.|||+.+...++.|++|...+.||.. +|..|.+|+-|.+|+.||++++.+. .. ....
T Consensus 515 La~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrql-qq-hdF~ 592 (705)
T KOG0639|consen 515 LAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQL-QQ-HDFS 592 (705)
T ss_pred hhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhh-hh-hhhh
Confidence 999999999999999999999999999999999999999999999 5999999999999999999987422 22 2346
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEEC
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNV 498 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~ 498 (609)
+.|.++..+|.+.+|++|-..+.|.|...... ..+.+..|...|.++.|.+.|++++.+| .|..+..|.+
T Consensus 593 SQIfSLg~cP~~dWlavGMens~vevlh~skp-------~kyqlhlheScVLSlKFa~cGkwfvStG---kDnlLnawrt 662 (705)
T KOG0639|consen 593 SQIFSLGYCPTGDWLAVGMENSNVEVLHTSKP-------EKYQLHLHESCVLSLKFAYCGKWFVSTG---KDNLLNAWRT 662 (705)
T ss_pred hhheecccCCCccceeeecccCcEEEEecCCc-------cceeecccccEEEEEEecccCceeeecC---chhhhhhccC
Confidence 78999999999999999999999988876643 4566777999999999999998777776 8999999999
Q ss_pred CCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 499 SSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 499 ~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
.-|..+......+.|.++..+.+.+++++++ .|....||.+
T Consensus 663 PyGasiFqskE~SsVlsCDIS~ddkyIVTGS--GdkkATVYeV 703 (705)
T KOG0639|consen 663 PYGASIFQSKESSSVLSCDISFDDKYIVTGS--GDKKATVYEV 703 (705)
T ss_pred ccccceeeccccCcceeeeeccCceEEEecC--CCcceEEEEE
Confidence 9999998888889999999999999999955 5766666653
No 139
>KOG0294|consensus
Probab=99.85 E-value=1.1e-19 Score=175.18 Aligned_cols=225 Identities=22% Similarity=0.321 Sum_probs=186.2
Q ss_pred EEEEeCCCeEEEEeCCCC------------eeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccC
Q psy4876 350 LGVGTSLGTVQLWDVSAK------------KKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNH 417 (609)
Q Consensus 350 Lasgs~dg~I~iwd~~~~------------~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h 417 (609)
|++|+....|.-+++.-. ..+..+..|.+.|++++.++.++++|+.|-+|+|||++.. .....+-.|
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~-~qlg~ll~H 82 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKR-KQLGILLSH 82 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecceeEeccCCCCcEEEEeccch-hhhcceecc
Confidence 566777666666655321 2245667899999999999999999999999999999987 467778889
Q ss_pred CCCeEEEEEccCCC--EEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEE
Q psy4876 418 TQEVCGLKWSPDGR--YLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYF 495 (609)
Q Consensus 418 ~~~V~~l~~spdg~--~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~i 495 (609)
.+.|+++.|.+.-. +|++|+.||.|.+|+...- ..+..+.+|.+.|+.++.+|.++.-|.+| .|+.++.
T Consensus 83 agsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W------~~~~slK~H~~~Vt~lsiHPS~KLALsVg---~D~~lr~ 153 (362)
T KOG0294|consen 83 AGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSW------ELLKSLKAHKGQVTDLSIHPSGKLALSVG---GDQVLRT 153 (362)
T ss_pred ccceEEEEecCCcchhheeeecCCCcEEEEEcCCe------EEeeeecccccccceeEecCCCceEEEEc---CCceeee
Confidence 99999999999665 8999999999999999876 88999999999999999999987556665 5999999
Q ss_pred EECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC
Q psy4876 496 WNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD 575 (609)
Q Consensus 496 wd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D 575 (609)
||+-.|+.-..+........+.|+|.|.++++.. .+.|-||.+.+-....++.. ..++.++.|. ++..|++|+.|
T Consensus 154 WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~---~~~i~i~q~d~A~v~~~i~~-~~r~l~~~~l-~~~~L~vG~d~ 228 (362)
T KOG0294|consen 154 WNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSG---RNKIDIYQLDNASVFREIEN-PKRILCATFL-DGSELLVGGDN 228 (362)
T ss_pred ehhhcCccceeeccCCcceeeEEcCCCCEEEEEe---ccEEEEEecccHhHhhhhhc-cccceeeeec-CCceEEEecCC
Confidence 9999998877777777777799999999888753 78999999987766655532 3567777775 66789999999
Q ss_pred CCEEEEEcCCCccc
Q psy4876 576 ETLRLWKIFEKVKS 589 (609)
Q Consensus 576 g~I~iWdl~~~~~~ 589 (609)
+.|++||.....+.
T Consensus 229 ~~i~~~D~ds~~~~ 242 (362)
T KOG0294|consen 229 EWISLKDTDSDTPL 242 (362)
T ss_pred ceEEEeccCCCccc
Confidence 99999999875544
No 140
>KOG0646|consensus
Probab=99.85 E-value=3.7e-20 Score=186.81 Aligned_cols=222 Identities=20% Similarity=0.304 Sum_probs=187.1
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCC-----
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRS----- 406 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~----- 406 (609)
-.+.|.+++-+|+|.+|+.|+..|.|++|.+.+|.++..+.+|-..|+|+.| |+.+|++|+.||.|.+|++..
T Consensus 80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~ 159 (476)
T KOG0646|consen 80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD 159 (476)
T ss_pred cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc
Confidence 5688999999999999999989999999999999999999999999999999 689999999999999998742
Q ss_pred ---CCeeEEEEccCCCCeEEEEEccC--CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcE
Q psy4876 407 ---RDHKVALLQNHTQEVCGLKWSPD--GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 407 ---~~~~~~~~~~h~~~V~~l~~spd--g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 481 (609)
...+...+..|+-+|+.+...+. ..+|++++.|.++++||+..+ ..+.++. ....+.+++.+|-+ ..
T Consensus 160 ~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g------~LLlti~-fp~si~av~lDpae-~~ 231 (476)
T KOG0646|consen 160 NDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLG------VLLLTIT-FPSSIKAVALDPAE-RV 231 (476)
T ss_pred cCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccc------eeeEEEe-cCCcceeEEEcccc-cE
Confidence 12467788899999999998774 357999999999999999988 5666664 46679999999976 45
Q ss_pred EEEEeccCCCeEEEEECCCCc----------------eeEEEcCC---CCeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 482 LASGGGTADRHIYFWNVSSGA----------------CLDSIDTK---SQVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 482 lasggGs~Dg~I~iwd~~t~~----------------~~~~~~~~---~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
+.+| +.+|.|.+.++.... .+..+.++ +.|++++++-||..|++ |..||+|+|||+.
T Consensus 232 ~yiG--t~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlS--Gd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 232 VYIG--TEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLS--GDEDGKVCVWDIY 307 (476)
T ss_pred EEec--CCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEe--eCCCCCEEEEecc
Confidence 5555 599999998875322 22333333 38999999999999999 7799999999999
Q ss_pred CCceEEEEeCCCCCEEEEEEeCCCC
Q psy4876 543 SLVKVAELHGHSARVLNLAMSPDET 567 (609)
Q Consensus 543 ~~~~~~~l~~h~~~V~~l~~spdg~ 567 (609)
+.++++++..-.++|+.+.+.|-.+
T Consensus 308 S~Q~iRtl~~~kgpVtnL~i~~~~~ 332 (476)
T KOG0646|consen 308 SKQCIRTLQTSKGPVTNLQINPLER 332 (476)
T ss_pred hHHHHHHHhhhccccceeEeecccc
Confidence 9999988876678899999866443
No 141
>KOG2106|consensus
Probab=99.85 E-value=1.4e-18 Score=176.45 Aligned_cols=288 Identities=16% Similarity=0.219 Sum_probs=215.9
Q ss_pred eeEEEEEecCCC---eEEE---EcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEE
Q psy4876 270 YYLNLIDWSHFN---VLAV---ALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVA 342 (609)
Q Consensus 270 ~~v~~l~wsp~~---lla~---s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~ 342 (609)
--|.+++||+-+ ++++ +.+..+.+||++.+ . .+.+.. .++.|....
T Consensus 155 ~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~-------------------------~--~~~~vk~sne~v~~a~ 207 (626)
T KOG2106|consen 155 RGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKK-------------------------A--KLGPVKTSNEVVFLAT 207 (626)
T ss_pred ccceeeeecccCCCceEEEecCCCccccchhhchhh-------------------------h--ccCcceeccceEEEEE
Confidence 348999999852 4443 33457889999762 1 222333 467799999
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCeeEE---EecCC-CCceEEEEec-CCEEEEEecCCeEEEEEcCCCCeeEEEEccC
Q psy4876 343 WIQEGYMLGVGTSLGTVQLWDVSAKKKCR---TMDGH-DVRVGALAWN-TYILSSGSRCGNIVHHDVRSRDHKVALLQNH 417 (609)
Q Consensus 343 ~spdg~~Lasgs~dg~I~iwd~~~~~~~~---~l~~h-~~~V~~l~~~-~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h 417 (609)
|+|.+..|++....|.+..|+.+.+.+.+ .+..+ ..-|.|++|. +.-+++|..+|.|.||+..+.. ..+....|
T Consensus 208 FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~-~~k~~~aH 286 (626)
T KOG2106|consen 208 FHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNR-ISKQVHAH 286 (626)
T ss_pred eccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCce-EEeEeeec
Confidence 99988655555666999999999876544 34433 3679999993 4566799999999999998764 44444599
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCC-----CC-----------------------------CccceEeec
Q psy4876 418 TQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQH-----TF-----------------------------STQPIHSLS 463 (609)
Q Consensus 418 ~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~-----~~-----------------------------~~~~~~~~~ 463 (609)
.+.|.+++...+|.+| +|+.|..|..||-.-... .. .........
T Consensus 287 ~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~ 365 (626)
T KOG2106|consen 287 DGGVFSLCMLRDGTLL-SGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQ 365 (626)
T ss_pred CCceEEEEEecCccEe-ecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEE
Confidence 9999999999999755 599999999999321110 00 001112234
Q ss_pred CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC
Q psy4876 464 RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS 543 (609)
Q Consensus 464 ~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~ 543 (609)
+|......++.+|+...++ +++ .|+.+++|+ ..+++.+.....++.++.|+|.| .+++ |+..|...+.|.++
T Consensus 366 gh~delwgla~hps~~q~~-T~g--qdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~--Gt~~G~w~V~d~e~ 437 (626)
T KOG2106|consen 366 GHGDELWGLATHPSKNQLL-TCG--QDKHVRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAV--GTATGRWFVLDTET 437 (626)
T ss_pred ecccceeeEEcCCChhhee-ecc--CcceEEEcc--CCceeEEEEecCceeEeeccCcc-eEEE--eeccceEEEEeccc
Confidence 6777888999999875555 443 899999999 66777777788899999999999 6666 77899999999998
Q ss_pred CceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhhh
Q psy4876 544 LVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEIK 595 (609)
Q Consensus 544 ~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~~ 595 (609)
...+. ++...+++.+++|+|+|.+||.|+.|+.|+||.+.......++..+
T Consensus 438 ~~lv~-~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k 488 (626)
T KOG2106|consen 438 QDLVT-IHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGK 488 (626)
T ss_pred ceeEE-EEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeee
Confidence 55444 4444889999999999999999999999999999987766555443
No 142
>KOG0302|consensus
Probab=99.84 E-value=7.5e-20 Score=179.96 Aligned_cols=195 Identities=24% Similarity=0.438 Sum_probs=159.5
Q ss_pred CCEEEEEecCCeEEEEEcCC---------------CCeeEEEEccCCCCeEEEEEccC-CCEEEEEeCCCcEEEEeCCCC
Q psy4876 387 TYILSSGSRCGNIVHHDVRS---------------RDHKVALLQNHTQEVCGLKWSPD-GRYLASGGNDNLLNIWSGVPG 450 (609)
Q Consensus 387 ~~~L~sgs~dg~I~iwd~~~---------------~~~~~~~~~~h~~~V~~l~~spd-g~~lasgs~Dg~I~iwd~~~~ 450 (609)
..+.++-+..|.|.||++.. ...++.++.+|..+=.+|+|||- ...|++|..-+.|++|...++
T Consensus 165 ~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g 244 (440)
T KOG0302|consen 165 EVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTG 244 (440)
T ss_pred cceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeeccC
Confidence 45556666778888888752 12467888899999999999992 224888888889999999887
Q ss_pred CCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC---ceeEEEcCCCCeEEEEEcCCCCeEEE
Q psy4876 451 QHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG---ACLDSIDTKSQVCALLWNSDYKELVS 527 (609)
Q Consensus 451 ~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~---~~~~~~~~~~~v~sl~~s~~g~~l~~ 527 (609)
.-.. -...+.+|...|..|+|+|....+|++|+ .|+.|+|||++.+ .++..-.+.+.|..|.|+....+|++
T Consensus 245 ~W~v---d~~Pf~gH~~SVEDLqWSptE~~vfaScS--~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLas 319 (440)
T KOG0302|consen 245 SWKV---DQRPFTGHTKSVEDLQWSPTEDGVFASCS--CDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLAS 319 (440)
T ss_pred ceee---cCccccccccchhhhccCCccCceEEeee--cCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeee
Confidence 4322 22345679999999999999999999985 8999999999988 56666566789999999999997776
Q ss_pred EEecCCCeEEEEECCC---CceEEEEeCCCCCEEEEEEeCC-CCEEEEEECCCCEEEEEcCCCcc
Q psy4876 528 AHGFAQNQLIIWKYPS---LVKVAELHGHSARVLNLAMSPD-ETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 528 ~sG~~dg~I~Iwd~~~---~~~~~~l~~h~~~V~~l~~spd-g~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
|.+||++.|||++. +.++..++-|..+|++|.|+|. ...|+++|.|..|.|||+.-...
T Consensus 320 --G~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D 382 (440)
T KOG0302|consen 320 --GGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEAD 382 (440)
T ss_pred --cCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCC
Confidence 77999999999874 5788999999999999999995 45788889999999999976543
No 143
>KOG0307|consensus
Probab=99.84 E-value=1e-20 Score=209.02 Aligned_cols=250 Identities=23% Similarity=0.446 Sum_probs=198.6
Q ss_pred cCCceeEEEEEecCC-----CeEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCe
Q psy4876 266 IQNDYYLNLIDWSHF-----NVLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENV 338 (609)
Q Consensus 266 ~~~~~~v~~l~wsp~-----~lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V 338 (609)
+..+...+.|+|++. |+|| |..||.|.+||...- ..+.....+.+.. |.+.|
T Consensus 61 ~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~---------------------~~~~~~~~la~~~~h~G~V 119 (1049)
T KOG0307|consen 61 LQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASI---------------------IANASEEVLATKSKHTGPV 119 (1049)
T ss_pred ccccccceeeeecccCCCccceeeccccCCceEEecchhh---------------------ccCcchHHHhhhcccCCce
Confidence 334555788999874 4677 455899999998761 0114455666666 99999
Q ss_pred EEEEEccCC-CEEEEEeCCCeEEEEeCCCCeeEEEec--CCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 339 CSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKKCRTMD--GHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 339 ~~v~~spdg-~~Lasgs~dg~I~iwd~~~~~~~~~l~--~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
..+.|++.+ +.||+|+.||.|.|||+..-+.-..+. .....|.+++|| .++|++++.+|.+.|||++... .+.
T Consensus 120 ~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~-pii 198 (1049)
T KOG0307|consen 120 LGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKK-PII 198 (1049)
T ss_pred eeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCC-ccc
Confidence 999999976 699999999999999998754433332 245789999996 5899999999999999999874 555
Q ss_pred EEccCCC--CeEEEEEccCCC-EEEEEeCCC---cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEe
Q psy4876 413 LLQNHTQ--EVCGLKWSPDGR-YLASGGNDN---LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG 486 (609)
Q Consensus 413 ~~~~h~~--~V~~l~~spdg~-~lasgs~Dg---~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg 486 (609)
.+..|.. .+..|+|+|+.. .|+++++|. .|.+||++... .+++.+++|+..|.++.||+.+..+++++|
T Consensus 199 ~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~as-----sP~k~~~~H~~GilslsWc~~D~~lllSsg 273 (1049)
T KOG0307|consen 199 KLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFAS-----SPLKILEGHQRGILSLSWCPQDPRLLLSSG 273 (1049)
T ss_pred ccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccC-----CchhhhcccccceeeeccCCCCchhhhccc
Confidence 5554443 578899999754 566666654 69999999764 688889999999999999999988888886
Q ss_pred ccCCCeEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc
Q psy4876 487 GTADRHIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV 545 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~ 545 (609)
.|+.|.+||.++++.+..+... ..+..+.|+|...-++++. +-||.|.||.+....
T Consensus 274 --kD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~a-sfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 274 --KDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAA-SFDGKISIYSLQGTD 330 (1049)
T ss_pred --CCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhh-eeccceeeeeeecCC
Confidence 8999999999999999999875 4899999999998665553 479999999986543
No 144
>KOG0270|consensus
Probab=99.84 E-value=1e-19 Score=182.52 Aligned_cols=205 Identities=19% Similarity=0.351 Sum_probs=170.0
Q ss_pred CCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCe
Q psy4876 334 GNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 334 h~~~V~~v~~spdg-~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
|.+.|.+++|+.+- +.||+|+.|.+|++||+.++++..++..|...|.++.|+ +.+|++|+.|++|.+.|++....
T Consensus 242 HTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~ 321 (463)
T KOG0270|consen 242 HTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSN 321 (463)
T ss_pred chHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccc
Confidence 88889999998875 789999999999999999999999999999999999995 68999999999999999996432
Q ss_pred eEEEEccCCCCeEEEEEccC-CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 410 KVALLQNHTQEVCGLKWSPD-GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spd-g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs 488 (609)
.-..+ ...+.|-.++|.|. ...++++..||+|+-+|++... +++.++..|.+.|.+|++++.-+.++++++
T Consensus 322 s~~~w-k~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~-----~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s-- 393 (463)
T KOG0270|consen 322 SGKEW-KFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG-----KPVWTLKAHDDEISGLSVNIQTPGLLSTAS-- 393 (463)
T ss_pred cCceE-EeccceEEEEecCCCceeEEEecCCceEEeeecCCCC-----CceeEEEeccCCcceEEecCCCCcceeecc--
Confidence 22222 24578999999994 4568888899999999999874 799999999999999999999999999974
Q ss_pred CCCeEEEEECCCCce--eEEEcC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceE
Q psy4876 489 ADRHIYFWNVSSGAC--LDSIDT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKV 547 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~~--~~~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~ 547 (609)
.|+.|++|++..... +..-.. -+...|.++.|+-..+++.+| ..+.++|||+.+...+
T Consensus 394 ~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG-~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 394 TDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGG-EKAVLRVWDIFTNSPV 454 (463)
T ss_pred ccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecC-ccceEEEeecccChhH
Confidence 899999999974433 222221 135778888998888877754 6779999998776543
No 145
>KOG1063|consensus
Probab=99.84 E-value=4.7e-19 Score=186.09 Aligned_cols=297 Identities=19% Similarity=0.313 Sum_probs=232.4
Q ss_pred ccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec----CCCCe
Q psy4876 265 EIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE----GNENV 338 (609)
Q Consensus 265 ~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----h~~~V 338 (609)
-+..+.+|+++.|+|.+ +|+++.|.++.||...... |-......+. ..+..
T Consensus 263 l~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~t-----------------------GiWv~~vRlGe~gg~a~GF 319 (764)
T KOG1063|consen 263 LMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENT-----------------------GIWVDVVRLGEVGGSAGGF 319 (764)
T ss_pred hcCcccceEEEEEccchhhheecccCcceEEEecCCcc-----------------------ceEEEEEEeecccccccce
Confidence 34556679999999996 9999999999999887611 2333333333 24568
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEeCCCC---eeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCC---ee
Q psy4876 339 CSVAWIQEGYMLGVGTSLGTVQLWDVSAK---KKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRD---HK 410 (609)
Q Consensus 339 ~~v~~spdg~~Lasgs~dg~I~iwd~~~~---~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~---~~ 410 (609)
.+.-|+|+++.+++-+..|-.++|..... .....+.||...|..++|+ |.+|++.+.|-+-+++---..+ +.
T Consensus 320 ~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHE 399 (764)
T KOG1063|consen 320 WGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHE 399 (764)
T ss_pred eeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceee
Confidence 89999999999999999999999984332 3445567999999999996 8999999999999988654222 44
Q ss_pred EEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCC---------------C-----------------CCC----
Q psy4876 411 VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPG---------------Q-----------------HTF---- 454 (609)
Q Consensus 411 ~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~---------------~-----------------~~~---- 454 (609)
+..-+-|...+.|++|-+..-.|++|.+...+++|+.... . ...
T Consensus 400 iaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~ 479 (764)
T KOG1063|consen 400 IARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGET 479 (764)
T ss_pred ecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCccccc
Confidence 5556678999999999987678999999999999975310 0 000
Q ss_pred ----------------------------------CccceEeecCCcccEEEEEEcCCCCcEEEEEeccC---CCeEEEEE
Q psy4876 455 ----------------------------------STQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA---DRHIYFWN 497 (609)
Q Consensus 455 ----------------------------------~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~---Dg~I~iwd 497 (609)
....++++-+|.-.|.+++.+|++ +++|++.-+. ...|++|+
T Consensus 480 ~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~g-nliASaCKS~~~ehAvI~lw~ 558 (764)
T KOG1063|consen 480 NTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTG-NLIASACKSSLKEHAVIRLWN 558 (764)
T ss_pred ccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCC-CEEeehhhhCCccceEEEEEe
Confidence 011234556899999999999988 6777764222 34699999
Q ss_pred CCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc----eEEEEeCCCCCEEEEEEeCCCCEEEEE
Q psy4876 498 VSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV----KVAELHGHSARVLNLAMSPDETTVLSA 572 (609)
Q Consensus 498 ~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~----~~~~l~~h~~~V~~l~~spdg~~L~s~ 572 (609)
..+...++.+..|+ .|+.++|+|||++|++++ .|.++.+|...... ....++.|..-|+++.|+|++.+++|+
T Consensus 559 t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvs--RDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTa 636 (764)
T KOG1063|consen 559 TANWLQVQELEGHSLTVTRLAFSPDGRYLLSVS--RDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATA 636 (764)
T ss_pred ccchhhhheecccceEEEEEEECCCCcEEEEee--cCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEe
Confidence 99999888888877 899999999999999976 89999999874332 233467899999999999999999999
Q ss_pred ECCCCEEEEEcCCCc
Q psy4876 573 GADETLRLWKIFEKV 587 (609)
Q Consensus 573 s~Dg~I~iWdl~~~~ 587 (609)
|.|.+|+||......
T Consensus 637 SRDK~VkVW~~~~~~ 651 (764)
T KOG1063|consen 637 SRDKKVKVWEEPDLR 651 (764)
T ss_pred cCCceEEEEeccCch
Confidence 999999999998873
No 146
>KOG2048|consensus
Probab=99.84 E-value=1.3e-18 Score=182.60 Aligned_cols=244 Identities=24% Similarity=0.386 Sum_probs=202.3
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC-eeEEEecCC-CCceEEEEec-CCEEEEEecCCeEEEEEcCCCCee
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK-KKCRTMDGH-DVRVGALAWN-TYILSSGSRCGNIVHHDVRSRDHK 410 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~-~~~~~l~~h-~~~V~~l~~~-~~~L~sgs~dg~I~iwd~~~~~~~ 410 (609)
....|.+|||+.+.+.||++-.+|.|.||++..+ -+...+.++ ...|.+++|. +..|++.+.+|.|.-||+.+. ..
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~l-k~ 102 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTL-KQ 102 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccC-ce
Confidence 5688999999999999999999999999999875 334455554 4679999995 889999999999999999997 46
Q ss_pred EEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCC
Q psy4876 411 VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTAD 490 (609)
Q Consensus 411 ~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~D 490 (609)
...+....+.|.+++.+|.+..++.|+.||.++.++...+.. +....+....+.|.+++|+|++. -++.| +.|
T Consensus 103 ~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I----~~~r~l~rq~sRvLslsw~~~~~-~i~~G--s~D 175 (691)
T KOG2048|consen 103 KYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKI----TYKRSLMRQKSRVLSLSWNPTGT-KIAGG--SID 175 (691)
T ss_pred eEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceE----EEEeecccccceEEEEEecCCcc-EEEec--ccC
Confidence 777788889999999999999999999999888888776632 22233444568999999999884 34554 699
Q ss_pred CeEEEEECCCCceeEEEcC---------CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEE
Q psy4876 491 RHIYFWNVSSGACLDSIDT---------KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLA 561 (609)
Q Consensus 491 g~I~iwd~~t~~~~~~~~~---------~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~ 561 (609)
|.|++||..++..+..+.. ..-|+++.|-.++. +++ |...|.|.+||...+..+..+..|.+.|.+++
T Consensus 176 g~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~t-I~s--gDS~G~V~FWd~~~gTLiqS~~~h~adVl~La 252 (691)
T KOG2048|consen 176 GVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDST-IAS--GDSAGTVTFWDSIFGTLIQSHSCHDADVLALA 252 (691)
T ss_pred ceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCc-EEE--ecCCceEEEEcccCcchhhhhhhhhcceeEEE
Confidence 9999999999987773321 12477888886654 444 77899999999999999999999999999999
Q ss_pred EeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 562 MSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 562 ~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
..+++.+|+++|.|+.|.-+...+...
T Consensus 253 v~~~~d~vfsaGvd~~ii~~~~~~~~~ 279 (691)
T KOG2048|consen 253 VADNEDRVFSAGVDPKIIQYSLTTNKS 279 (691)
T ss_pred EcCCCCeEEEccCCCceEEEEecCCcc
Confidence 999999999999999999998887654
No 147
>KOG0302|consensus
Probab=99.84 E-value=2.6e-19 Score=176.19 Aligned_cols=240 Identities=23% Similarity=0.399 Sum_probs=184.5
Q ss_pred cCCCCeEEEEEccCC--CEEEEEeCCCeEEEEeCCC----------------CeeEEEecCCCCceEEEEecC---CEEE
Q psy4876 333 EGNENVCSVAWIQEG--YMLGVGTSLGTVQLWDVSA----------------KKKCRTMDGHDVRVGALAWNT---YILS 391 (609)
Q Consensus 333 ~h~~~V~~v~~spdg--~~Lasgs~dg~I~iwd~~~----------------~~~~~~l~~h~~~V~~l~~~~---~~L~ 391 (609)
.|.+.+.-+.-++-+ .+.|+-+..|.|+||++.. .+.+.++.+|...=..|+|++ ..|+
T Consensus 149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Ll 228 (440)
T KOG0302|consen 149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLL 228 (440)
T ss_pred ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccc
Confidence 377777777777654 5666667889999999852 245778889999999999965 4578
Q ss_pred EEecCCeEEEEEcCCCCee--EEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCccc
Q psy4876 392 SGSRCGNIVHHDVRSRDHK--VALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA 468 (609)
Q Consensus 392 sgs~dg~I~iwd~~~~~~~--~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~ 468 (609)
+|..-+.|++|...++.-. ...+.+|+..|-.|+||| ....||+|+-||+|+|||++.+.. +.......|.+.
T Consensus 229 sGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~----~~~~~~kAh~sD 304 (440)
T KOG0302|consen 229 SGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPK----KAAVSTKAHNSD 304 (440)
T ss_pred cCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCc----cceeEeeccCCc
Confidence 8888899999998876432 245668999999999999 456899999999999999998732 333444789999
Q ss_pred EEEEEEcCCCCcEEEEEeccCCCeEEEEECCC---CceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC
Q psy4876 469 VKAIAWCPWSPNVLASGGGTADRHIYFWNVSS---GACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL 544 (609)
Q Consensus 469 V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t---~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~ 544 (609)
|+.|.|+..-. +|++|+ .||+++|||++. ++++..++.| .+|+++.|+|....++.++| .|++|.|||+...
T Consensus 305 VNVISWnr~~~-lLasG~--DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg-~D~QitiWDlsvE 380 (440)
T KOG0302|consen 305 VNVISWNRREP-LLASGG--DDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASG-EDNQITIWDLSVE 380 (440)
T ss_pred eeeEEccCCcc-eeeecC--CCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEecc-CCCcEEEEEeecc
Confidence 99999998876 888875 999999999984 5677888755 69999999998877777655 8999999998421
Q ss_pred ce----------------EEEEeCC--CCCEEEEEEeCCC-CEEEEEECCCCEEEE
Q psy4876 545 VK----------------VAELHGH--SARVLNLAMSPDE-TTVLSAGADETLRLW 581 (609)
Q Consensus 545 ~~----------------~~~l~~h--~~~V~~l~~spdg-~~L~s~s~Dg~I~iW 581 (609)
.- ..-+--| +..|..+.|++.- .+|++.+.||. .||
T Consensus 381 ~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf-nVf 435 (440)
T KOG0302|consen 381 ADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF-NVF 435 (440)
T ss_pred CChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce-eEE
Confidence 10 0111124 3468889999864 47888888874 444
No 148
>KOG2919|consensus
Probab=99.84 E-value=4.8e-19 Score=171.20 Aligned_cols=281 Identities=18% Similarity=0.284 Sum_probs=209.0
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEc----
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWI---- 344 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~s---- 344 (609)
++..+.||||| +|+-+.|..+.+|++....-. ...... ..-.......+...+.|...+|-
T Consensus 51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys------------~~~~~~-~~~~~~~~~r~~eg~tvydy~wYs~M~ 117 (406)
T KOG2919|consen 51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYS------------KKADGP-LNFSKHLSYRYQEGETVYDYCWYSRMK 117 (406)
T ss_pred hhccceeCCCCceEEeecccCeeeEEecChhhcc------------cCCCCc-cccccceeEEeccCCEEEEEEeeeccc
Confidence 46678999998 899999999999998652000 000000 00111222333366788888886
Q ss_pred ---cCCCEEEEEeCCCeEEEEeCCCCeeEEEecC--CCC---ceEEEEe--cCCEEEEEecCCeEEEEEc-CCCC-eeEE
Q psy4876 345 ---QEGYMLGVGTSLGTVQLWDVSAKKKCRTMDG--HDV---RVGALAW--NTYILSSGSRCGNIVHHDV-RSRD-HKVA 412 (609)
Q Consensus 345 ---pdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~--h~~---~V~~l~~--~~~~L~sgs~dg~I~iwd~-~~~~-~~~~ 412 (609)
|+..++|+.+.+.-|++||.-+|+....+.+ |.. ...+++| +|..|++|.. ..|+++|+ +.+. ..+.
T Consensus 118 s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk-rcirvFdt~RpGr~c~vy 196 (406)
T KOG2919|consen 118 SDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK-RCIRVFDTSRPGRDCPVY 196 (406)
T ss_pred cCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeeccc-ceEEEeeccCCCCCCcch
Confidence 5678999999999999999999998887764 333 3457888 6888887754 68999999 4332 1122
Q ss_pred EE-----ccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEe
Q psy4876 413 LL-----QNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG 486 (609)
Q Consensus 413 ~~-----~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg 486 (609)
.. .+..+-|.+++|+| +...+|+|+....+-||.-..+ .++..+.+|.+.|+.++|+++|..++. |.
T Consensus 197 ~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~------~pl~llggh~gGvThL~~~edGn~lfs-Ga 269 (406)
T KOG2919|consen 197 TTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGR------RPLQLLGGHGGGVTHLQWCEDGNKLFS-GA 269 (406)
T ss_pred hhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCC------CceeeecccCCCeeeEEeccCcCeecc-cc
Confidence 21 23367899999999 5669999999999989887777 788999999999999999999975554 43
Q ss_pred ccCCCeEEEEECCC-CceeEEEcCCC----CeEEEEEcCCCCeEEEEEecCCCeEEEEECCC-CceEEEEeCCCCCEEEE
Q psy4876 487 GTADRHIYFWNVSS-GACLDSIDTKS----QVCALLWNSDYKELVSAHGFAQNQLIIWKYPS-LVKVAELHGHSARVLNL 560 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t-~~~~~~~~~~~----~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~-~~~~~~l~~h~~~V~~l 560 (609)
-.|..|..||++. +.++..+..+. +-.-....|+++.|++ |..+|.|++||+.. +..+..+..|...|+.+
T Consensus 270 -Rk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~Las--G~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgv 346 (406)
T KOG2919|consen 270 -RKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILAS--GDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGV 346 (406)
T ss_pred -cCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeec--cCCCccEEEEecCCCCCcccccccccccccce
Confidence 4789999999984 44555554331 2333455688899888 77999999999988 66677888899999999
Q ss_pred EEeCCCCEEEEEECC
Q psy4876 561 AMSPDETTVLSAGAD 575 (609)
Q Consensus 561 ~~spdg~~L~s~s~D 575 (609)
+++|--.++++++..
T Consensus 347 slnP~mpilatssGq 361 (406)
T KOG2919|consen 347 SLNPIMPILATSSGQ 361 (406)
T ss_pred ecCcccceeeeccCc
Confidence 999998888888764
No 149
>KOG2055|consensus
Probab=99.83 E-value=2.7e-19 Score=180.17 Aligned_cols=244 Identities=13% Similarity=0.244 Sum_probs=198.8
Q ss_pred ceeEEEEEecCCC---eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec--CCCCeEEEEE
Q psy4876 269 DYYLNLIDWSHFN---VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE--GNENVCSVAW 343 (609)
Q Consensus 269 ~~~v~~l~wsp~~---lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--h~~~V~~v~~ 343 (609)
.+.|.+..|.|+| +++++....+|.||+.+ .++.++..+. ....+.....
T Consensus 257 ~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~-------------------------ak~~k~~~~~g~e~~~~e~FeV 311 (514)
T KOG2055|consen 257 KFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLET-------------------------AKVTKLKPPYGVEEKSMERFEV 311 (514)
T ss_pred cCccceeeecCCCceEEEecccceEEEEeeccc-------------------------cccccccCCCCcccchhheeEe
Confidence 4457888999986 56677788999999998 6666665554 3456778899
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCC-CC
Q psy4876 344 IQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHT-QE 420 (609)
Q Consensus 344 spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~-~~ 420 (609)
++++++||+.+..|.|.|....+++.+..++ -.+.|..++| ++..|++++.+|.|.+||+++. .++..+.... -.
T Consensus 312 Shd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~-~~~~rf~D~G~v~ 389 (514)
T KOG2055|consen 312 SHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQN-SCLHRFVDDGSVH 389 (514)
T ss_pred cCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCc-ceEEEEeecCccc
Confidence 9999999999999999999999999998887 6788999999 6788999999999999999987 4666655322 22
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t 500 (609)
-++++.+++|.|||+|+..|.|.|||..+.......+|+..+..-...|++|+|+++.. +||.++.-.+..+++-.+.+
T Consensus 390 gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~q-iLAiaS~~~knalrLVHvPS 468 (514)
T KOG2055|consen 390 GTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQ-ILAIASRVKKNALRLVHVPS 468 (514)
T ss_pred eeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchh-hhhhhhhccccceEEEeccc
Confidence 35677789999999999999999999776544455588888888888999999999985 66555445788999999887
Q ss_pred CceeEEEcCC----CCeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 501 GACLDSIDTK----SQVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 501 ~~~~~~~~~~----~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
......+... +.|++++|+|.+.++++ |..+|.|.+|.+.
T Consensus 469 ~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAv--GNe~grv~l~kL~ 512 (514)
T KOG2055|consen 469 CTVFSNFPTSNTKVGHVTCMAFSPNSGYLAV--GNEAGRVHLFKLH 512 (514)
T ss_pred eeeeccCCCCCCcccceEEEEecCCCceEEe--ecCCCceeeEeec
Confidence 7666555433 47999999999999999 7799999999864
No 150
>KOG4378|consensus
Probab=99.83 E-value=3.7e-19 Score=180.10 Aligned_cols=270 Identities=14% Similarity=0.210 Sum_probs=205.8
Q ss_pred CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEE--eCCCe
Q psy4876 281 NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVG--TSLGT 358 (609)
Q Consensus 281 ~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasg--s~dg~ 358 (609)
++.+++.+..++|||+.... +....+. ....-.+.++.|..... |+++ +.|..
T Consensus 4 Nl~~aS~gd~~kl~D~s~~~-----------------------~~~~~~~-~t~~pg~~s~~w~~~n~-lvvas~~gdk~ 58 (673)
T KOG4378|consen 4 NLHVASTGDKTKLSDFSDLE-----------------------TKSEYVH-QTAEPGDFSFNWQRRNF-LVVASMAGDKV 58 (673)
T ss_pred ceeeeccCCceEEeeccccc-----------------------Ccccccc-CCCCCcceeeeccccce-EEEeecCCcee
Confidence 47788888999999998721 1111111 11233489999987664 4444 45678
Q ss_pred EEEEeCCCC--e--eEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCE
Q psy4876 359 VQLWDVSAK--K--KCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRY 432 (609)
Q Consensus 359 I~iwd~~~~--~--~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 432 (609)
|++|.-... + .++...+. .-.|++. -..++++|+..+.|+|||++.. .+.+.+.+|.+.|+++.++-...|
T Consensus 59 ~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~k-l~hr~lkdh~stvt~v~YN~~Dey 135 (673)
T KOG4378|consen 59 MRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQSLYEISGGQSGCVKIWDLRAK-LIHRFLKDHQSTVTYVDYNNTDEY 135 (673)
T ss_pred EEEecccCCCCccceeeccccc--hHHHHhhhhcceeeeccCcCceeeehhhHHH-HHhhhccCCcceeEEEEecCCcce
Confidence 899975432 1 22233333 2233333 2478999999999999999954 577788999999999999999999
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCCccceEeecCC-cccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc--C
Q psy4876 433 LASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRH-QAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID--T 509 (609)
Q Consensus 433 lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~--~ 509 (609)
||+++..|.|.|..+.++ .....+... ...|.-+.|+|..+.+|.+++ .+|.|.+||+....++..+. +
T Consensus 136 iAsvs~gGdiiih~~~t~------~~tt~f~~~sgqsvRll~ys~skr~lL~~as--d~G~VtlwDv~g~sp~~~~~~~H 207 (673)
T KOG4378|consen 136 IASVSDGGDIIIHGTKTK------QKTTTFTIDSGQSVRLLRYSPSKRFLLSIAS--DKGAVTLWDVQGMSPIFHASEAH 207 (673)
T ss_pred eEEeccCCcEEEEecccC------ccccceecCCCCeEEEeecccccceeeEeec--cCCeEEEEeccCCCcccchhhhc
Confidence 999999999999999987 344445433 345668999999999998884 89999999999877776653 3
Q ss_pred CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 510 KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 510 ~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
..+...|+|+|....|++..| .|..|.+||.........+. ...+...++|+++|.+|+.|...|.|..||+...+.
T Consensus 208 sAP~~gicfspsne~l~vsVG-~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~ 284 (673)
T KOG4378|consen 208 SAPCRGICFSPSNEALLVSVG-YDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKA 284 (673)
T ss_pred cCCcCcceecCCccceEEEec-ccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCC
Confidence 458899999999988888766 79999999998777666664 456889999999999999999999999999987554
No 151
>KOG1538|consensus
Probab=99.83 E-value=8.2e-19 Score=182.76 Aligned_cols=274 Identities=17% Similarity=0.305 Sum_probs=209.9
Q ss_pred eEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCC
Q psy4876 271 YLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGY 348 (609)
Q Consensus 271 ~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~ 348 (609)
.|+.++|-||| -+..+.+..++|||... |. .+.++. |.+.|.||+|+.||+
T Consensus 14 ci~d~afkPDGsqL~lAAg~rlliyD~nd-------------------------G~--llqtLKgHKDtVycVAys~dGk 66 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGSRLLVYDTSD-------------------------GT--LLQPLKGHKDTVYCVAYAKDGK 66 (1081)
T ss_pred chheeEECCCCceEEEecCCEEEEEeCCC-------------------------cc--cccccccccceEEEEEEccCCc
Confidence 67889999998 66677888999999987 44 455666 999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecC--CEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEE
Q psy4876 349 MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT--YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKW 426 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 426 (609)
.+|+|+.|..|.||.-.-...+ .+ .|...|.|+.||+ +.|++++- ...-+|...... +... .....|++++|
T Consensus 67 rFASG~aDK~VI~W~~klEG~L-kY-SH~D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~--V~K~-kss~R~~~CsW 140 (1081)
T KOG1538|consen 67 RFASGSADKSVIIWTSKLEGIL-KY-SHNDAIQCMSFNPITHQLASCSL-SDFGLWSPEQKS--VSKH-KSSSRIICCSW 140 (1081)
T ss_pred eeccCCCceeEEEeccccccee-ee-ccCCeeeEeecCchHHHhhhcch-hhccccChhhhh--HHhh-hhheeEEEeee
Confidence 9999999999999986432222 12 4999999999985 67777765 346678766532 2222 23467899999
Q ss_pred ccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCC----cEEEEEeccCCCeEEEEECCCCc
Q psy4876 427 SPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSP----NVLASGGGTADRHIYFWNVSSGA 502 (609)
Q Consensus 427 spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~----~llasggGs~Dg~I~iwd~~t~~ 502 (609)
..||++|+.|-.+|+|.|-+..... ...+..-.+...+|.+++|+|... .++++. ....++.+|.+. |+
T Consensus 141 tnDGqylalG~~nGTIsiRNk~gEe----k~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~--DW~qTLSFy~Ls-G~ 213 (1081)
T KOG1538|consen 141 TNDGQYLALGMFNGTISIRNKNGEE----KVKIERPGGSNSPIWSICWNPSSGEGRNDILAVA--DWGQTLSFYQLS-GK 213 (1081)
T ss_pred cCCCcEEEEeccCceEEeecCCCCc----ceEEeCCCCCCCCceEEEecCCCCCCccceEEEE--eccceeEEEEec-ce
Confidence 9999999999999999998654321 123334445778999999999642 344444 356777777764 44
Q ss_pred eeE-EEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 503 CLD-SIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 503 ~~~-~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
.+. .-...-...++.+.++|.+++. |+.|+.+.+|. +.|..+.++-....+|+.++..|++++++.|+.||+|..|
T Consensus 214 ~Igk~r~L~FdP~CisYf~NGEy~Li--GGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACy 290 (1081)
T KOG1538|consen 214 QIGKDRALNFDPCCISYFTNGEYILL--GGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACY 290 (1081)
T ss_pred eecccccCCCCchhheeccCCcEEEE--ccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehh
Confidence 443 3334457889999999999999 66899999997 5677777776677899999999999999999999999999
Q ss_pred EcCCCc
Q psy4876 582 KIFEKV 587 (609)
Q Consensus 582 dl~~~~ 587 (609)
++-...
T Consensus 291 Nl~fST 296 (1081)
T KOG1538|consen 291 NLIFST 296 (1081)
T ss_pred hhHHhH
Confidence 875443
No 152
>KOG1063|consensus
Probab=99.82 E-value=4.4e-18 Score=178.85 Aligned_cols=280 Identities=22% Similarity=0.354 Sum_probs=208.2
Q ss_pred EEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCC---
Q psy4876 273 NLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGY--- 348 (609)
Q Consensus 273 ~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~--- 348 (609)
+..+|.|.+++|.|....|.+||..+ . ..+..+. |...|+|+.|-|+..
T Consensus 18 ~v~sw~~~~~vafGa~~~Iav~dp~k-------------------------~--~i~t~l~GH~a~VnC~~~l~~s~~~a 70 (764)
T KOG1063|consen 18 KVSSWGPGGLVAFGAGPAIAVADPEK-------------------------I--LIVTTLDGHVARVNCVHWLPTSEIVA 70 (764)
T ss_pred ccccccccceEEecCCceEEEeCccc-------------------------c--eeEEeccCCccceEEEEEcccccccc
Confidence 34678889999999999999999866 2 3445555 999999999999886
Q ss_pred EEEEEeCCCeEEEEeCCCC--eeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCC------------------
Q psy4876 349 MLGVGTSLGTVQLWDVSAK--KKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRD------------------ 408 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~--~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~------------------ 408 (609)
++++|+.||.|.+|.++.. ..+..+.+|...+.|+.-......+...|+.+.+||....+
T Consensus 71 ~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLc 150 (764)
T KOG1063|consen 71 EMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLC 150 (764)
T ss_pred eEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHH
Confidence 8999999999999999843 34566777666555554433333344688889999884211
Q ss_pred -------------------------------eeEEEEccCCCCeEEEEEccCC---CEEEEEeCCCcEEEEeCCCCCCCC
Q psy4876 409 -------------------------------HKVALLQNHTQEVCGLKWSPDG---RYLASGGNDNLLNIWSGVPGQHTF 454 (609)
Q Consensus 409 -------------------------------~~~~~~~~h~~~V~~l~~spdg---~~lasgs~Dg~I~iwd~~~~~~~~ 454 (609)
..+..+.+|.+.|.+|+|...+ -+||++++|..|+||.+.-.....
T Consensus 151 L~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~ 230 (764)
T KOG1063|consen 151 LAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDED 230 (764)
T ss_pred HhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCcc
Confidence 2234567899999999998744 489999999999999876443100
Q ss_pred -----------C----ccce----------EeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC--ceeEEE
Q psy4876 455 -----------S----TQPI----------HSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG--ACLDSI 507 (609)
Q Consensus 455 -----------~----~~~~----------~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~--~~~~~~ 507 (609)
. .... ..+.+|...|.++.|+|.+..||.+ +.|.++.+|.-.+. --+...
T Consensus 231 ~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSA---SaDksmiiW~pd~~tGiWv~~v 307 (764)
T KOG1063|consen 231 SNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSA---SADKSMIIWKPDENTGIWVDVV 307 (764)
T ss_pred ccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheec---ccCcceEEEecCCccceEEEEE
Confidence 0 0111 1234899999999999998666655 48999999987644 222222
Q ss_pred c----CC--CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC---CceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCE
Q psy4876 508 D----TK--SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS---LVKVAELHGHSARVLNLAMSPDETTVLSAGADETL 578 (609)
Q Consensus 508 ~----~~--~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~---~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I 578 (609)
. .+ .......|++++..+++- +..|..++|.... ......+.||.+.|.+++|+|.|.+|+++|.|.+-
T Consensus 308 RlGe~gg~a~GF~g~lw~~n~~~ii~~--g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTT 385 (764)
T KOG1063|consen 308 RLGEVGGSAGGFWGGLWSPNSNVIIAH--GRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTT 385 (764)
T ss_pred EeecccccccceeeEEEcCCCCEEEEe--cccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccce
Confidence 2 11 257899999999877763 3789999998332 23344567999999999999999999999999999
Q ss_pred EEEEcC
Q psy4876 579 RLWKIF 584 (609)
Q Consensus 579 ~iWdl~ 584 (609)
|+|--.
T Consensus 386 RlFa~w 391 (764)
T KOG1063|consen 386 RLFARW 391 (764)
T ss_pred eeeccc
Confidence 998766
No 153
>KOG1587|consensus
Probab=99.82 E-value=7.1e-18 Score=182.10 Aligned_cols=253 Identities=21% Similarity=0.252 Sum_probs=192.1
Q ss_pred eecCCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCee--EE----EecCCCCceEEEEe--c--CCEEEEEecCCeE
Q psy4876 331 DLEGNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKK--CR----TMDGHDVRVGALAW--N--TYILSSGSRCGNI 399 (609)
Q Consensus 331 ~~~h~~~V~~v~~spdg-~~Lasgs~dg~I~iwd~~~~~~--~~----~l~~h~~~V~~l~~--~--~~~L~sgs~dg~I 399 (609)
.+.....|+|+.|+|.. .+||.|+.+|.|.+||+..+.. .. ....|...|..+.| + +.-+++++.||.|
T Consensus 238 ~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i 317 (555)
T KOG1587|consen 238 VLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSI 317 (555)
T ss_pred EEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcE
Confidence 34457899999999964 8899999999999999987654 22 22358899999999 2 3568999999999
Q ss_pred EEEEcCCCCeeEEEE-----c------cCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCC--CCccceEeecCC
Q psy4876 400 VHHDVRSRDHKVALL-----Q------NHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHT--FSTQPIHSLSRH 465 (609)
Q Consensus 400 ~iwd~~~~~~~~~~~-----~------~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~--~~~~~~~~~~~h 465 (609)
..|+++....+.... . .-...+++++|.+ +-..|++|+.+|.|..=+-...... ...+....+..|
T Consensus 318 ~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h 397 (555)
T KOG1587|consen 318 CSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITH 397 (555)
T ss_pred eeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccccccccccccc
Confidence 999887543211111 1 1124688899988 6678999999999887333322111 112334566779
Q ss_pred cccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC-CCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCC
Q psy4876 466 QAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS-SGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPS 543 (609)
Q Consensus 466 ~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~-t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~ 543 (609)
.++|.++.++|.+..++.++| |-+++||... ...++..+..+. .+++++|||....++++ +..+|.|.|||+..
T Consensus 398 ~g~v~~v~~nPF~~k~fls~g---DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~-~d~~G~l~iWDLl~ 473 (555)
T KOG1587|consen 398 IGPVYAVSRNPFYPKNFLSVG---DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFAT-VDGDGNLDIWDLLQ 473 (555)
T ss_pred CcceEeeecCCCccceeeeec---cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEE-EcCCCceehhhhhc
Confidence 999999999999998888874 9999999988 666666666554 59999999998887766 55899999999853
Q ss_pred --CceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 544 --LVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 544 --~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
..++....-+....+.+.|+++|+.|+.|...|++.+|++...-
T Consensus 474 ~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~l 519 (555)
T KOG1587|consen 474 DDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSESL 519 (555)
T ss_pred cccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCchh
Confidence 44555555556677888899999999999999999999996433
No 154
>KOG1009|consensus
Probab=99.81 E-value=4.6e-18 Score=169.07 Aligned_cols=296 Identities=18% Similarity=0.282 Sum_probs=207.3
Q ss_pred eEEEEEecCCC---eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 271 YLNLIDWSHFN---VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 271 ~v~~l~wsp~~---lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
.+..++|.++. +.++|.|..|+||.+........ ...++.+..+. |...|++|.|+|+
T Consensus 15 pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~------------------~~~V~y~s~Ls~H~~aVN~vRf~p~ 76 (434)
T KOG1009|consen 15 PVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGG------------------DMKVEYLSSLSRHTRAVNVVRFSPD 76 (434)
T ss_pred ceEEEEeccCcccceecccCccceeeeeeeecCCCCC------------------ceeEEEeecccCCcceeEEEEEcCC
Confidence 35667777752 56699999999999987422210 03566667777 9999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCC--------C--------CeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCC
Q psy4876 347 GYMLGVGTSLGTVQLWDVS--------A--------KKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRD 408 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~--------~--------~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~ 408 (609)
|..||+|+.+|.|.+|-.. + ....+.+.+|...|..++| ++.++++++.|..+++||+..+
T Consensus 77 gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G- 155 (434)
T KOG1009|consen 77 GELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAG- 155 (434)
T ss_pred cCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccc-
Confidence 9999999999999999765 2 2345677889999999999 6899999999999999999998
Q ss_pred eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCc---------------cceEeec--CCcccEEE
Q psy4876 409 HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFST---------------QPIHSLS--RHQAAVKA 471 (609)
Q Consensus 409 ~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~---------------~~~~~~~--~h~~~V~~ 471 (609)
.....+..|...|..++|.|-++++++-+.|...+++.+......... ...+.+. ........
T Consensus 156 ~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrR 235 (434)
T KOG1009|consen 156 QLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRR 235 (434)
T ss_pred eeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhh
Confidence 578889999999999999999999999999987777765543211000 0011110 01123456
Q ss_pred EEEcCCCCcEEEEEecc-------CCCeEEEEECCC-CceeEEEcCC-CCeEEEEEcC-----------------CCCeE
Q psy4876 472 IAWCPWSPNVLASGGGT-------ADRHIYFWNVSS-GACLDSIDTK-SQVCALLWNS-----------------DYKEL 525 (609)
Q Consensus 472 l~~sp~~~~llasggGs-------~Dg~I~iwd~~t-~~~~~~~~~~-~~v~sl~~s~-----------------~g~~l 525 (609)
++|+|+|. ++++..|. .-+..++|+-.. ..+...+... .....+.|+| -++.+
T Consensus 236 lsfTPdG~-llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlv 314 (434)
T KOG1009|consen 236 LSFTPDGS-LLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLV 314 (434)
T ss_pred cccCCCCc-EEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceE
Confidence 78999985 44443211 122334454331 1122222211 1233333332 23333
Q ss_pred EEEEecCCCeEEEEECCCCceEEEEeC-CCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 526 VSAHGFAQNQLIIWKYPSLVKVAELHG-HSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 526 ~~~sG~~dg~I~Iwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
++.. ..+.|+|||..+..++..... |-..|++++|++||.+|+..+.||..-+-.++..+.
T Consensus 315 faiA--t~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~el 376 (434)
T KOG1009|consen 315 FAIA--TKNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWEL 376 (434)
T ss_pred EEEe--ecceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhc
Confidence 3332 488999999999888877643 888999999999999999999999988877766554
No 155
>KOG1445|consensus
Probab=99.81 E-value=5.6e-18 Score=175.73 Aligned_cols=118 Identities=19% Similarity=0.384 Sum_probs=98.6
Q ss_pred ccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc-------eeEEEcCC-CCeEEEEEcCCCC-eEEEEEecCCCeEE
Q psy4876 467 AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA-------CLDSIDTK-SQVCALLWNSDYK-ELVSAHGFAQNQLI 537 (609)
Q Consensus 467 ~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~-------~~~~~~~~-~~v~sl~~s~~g~-~l~~~sG~~dg~I~ 537 (609)
..|+.+.|.|....-|++++ .||.|++|.+..+. ....+..+ ..|+++.|+|-.. .|+++ ..|-+|+
T Consensus 628 t~vtDl~WdPFD~~rLAVa~--ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~a--syd~Ti~ 703 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVAT--DDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVA--SYDSTIE 703 (1012)
T ss_pred ceeeecccCCCChHHeeecc--cCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhh--hccceee
Confidence 45788899998888888874 89999999997653 23344444 4899999999754 44453 3799999
Q ss_pred EEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 538 IWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 538 Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
+||+.+++....+.+|++.|.+++|||||+.+++.+.||+|++|+-...+.
T Consensus 704 lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 704 LWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ 754 (1012)
T ss_pred eeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCC
Confidence 999999999999999999999999999999999999999999999877654
No 156
>KOG1034|consensus
Probab=99.81 E-value=2.8e-18 Score=166.40 Aligned_cols=281 Identities=19% Similarity=0.324 Sum_probs=207.6
Q ss_pred EEEEEecC------CCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec---CCCCeEEEE
Q psy4876 272 LNLIDWSH------FNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE---GNENVCSVA 342 (609)
Q Consensus 272 v~~l~wsp------~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---h~~~V~~v~ 342 (609)
+..++|++ -+++|....+.|.+|+.... +.+..+.... +++....++
T Consensus 41 I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d------------------------~~ir~lq~y~D~d~~Esfytcs 96 (385)
T KOG1034|consen 41 IFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGD------------------------GGIRLLQSYADEDHDESFYTCS 96 (385)
T ss_pred cceeeeehhcCCCCCceEEEeCCcEEEEEEECCc------------------------cceeeeeeccCCCCCcceEEEE
Confidence 44566653 14888888889999988762 2223333332 778888999
Q ss_pred EccCC----CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEEEE-
Q psy4876 343 WIQEG----YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALL- 414 (609)
Q Consensus 343 ~spdg----~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~- 414 (609)
|+-+. .+||+|+.-|.|+|.|+.++++...+.+|...|..|.+. ++++++++.|-.|++|++++. .++..+
T Consensus 97 w~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~-~Cv~VfG 175 (385)
T KOG1034|consen 97 WSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTD-VCVAVFG 175 (385)
T ss_pred EEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCC-eEEEEec
Confidence 98753 588999999999999999999999999999999999994 679999999999999999986 455554
Q ss_pred --ccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCC------------c---------cceE-eecCCcccEE
Q psy4876 415 --QNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFS------------T---------QPIH-SLSRHQAAVK 470 (609)
Q Consensus 415 --~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~------------~---------~~~~-~~~~h~~~V~ 470 (609)
.+|.++|.++.|+++|.+|++++.|..|++|++...+.... . -+.. +-..|...|-
T Consensus 176 G~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVD 255 (385)
T KOG1034|consen 176 GVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVD 255 (385)
T ss_pred ccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHH
Confidence 57999999999999999999999999999999984321000 0 0111 2234777888
Q ss_pred EEEEcCCCCcEEEEEeccCCCeEEEEEC-CCCce-------------eEEEcCC-CCeEE--EEEcCCCCeEEEEEecCC
Q psy4876 471 AIAWCPWSPNVLASGGGTADRHIYFWNV-SSGAC-------------LDSIDTK-SQVCA--LLWNSDYKELVSAHGFAQ 533 (609)
Q Consensus 471 ~l~~sp~~~~llasggGs~Dg~I~iwd~-~t~~~-------------~~~~~~~-~~v~s--l~~s~~g~~l~~~sG~~d 533 (609)
|+.|-- .++++-+ -++.|..|.. .-++. +..++.. ..++- .+|.+-++.|+. |...
T Consensus 256 Cvrw~g---d~ilSks--cenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~--gnq~ 328 (385)
T KOG1034|consen 256 CVRWFG---DFILSKS--CENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLAL--GNQS 328 (385)
T ss_pred HHHHHh---hheeecc--cCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhh--ccCC
Confidence 888864 3455542 5789999987 22221 2222222 23443 455677888887 7799
Q ss_pred CeEEEEECCCCceE--EEEeC--CCCCEEEEEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 534 NQLIIWKYPSLVKV--AELHG--HSARVLNLAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 534 g~I~Iwd~~~~~~~--~~l~~--h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
|.|.+||+...++. .++.. ....|...+|+.||.+|+..+.|++|.-||.-
T Consensus 329 g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 329 GKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred CcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 99999999876552 22221 23579999999999999999999999999853
No 157
>KOG1188|consensus
Probab=99.80 E-value=2.6e-18 Score=167.50 Aligned_cols=270 Identities=21% Similarity=0.308 Sum_probs=193.2
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC--CCEEEEEeCCCe
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE--GYMLGVGTSLGT 358 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd--g~~Lasgs~dg~ 358 (609)
++++-+.|.|+|||..+ +. .+..+. +...+..+.|..+ ...+.+|+.||+
T Consensus 43 vav~lSngsv~lyd~~t-------------------------g~--~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~ 95 (376)
T KOG1188|consen 43 VAVSLSNGSVRLYDKGT-------------------------GQ--LLEEFKGPPATTNGVRFISCDSPHGVISCSSDGT 95 (376)
T ss_pred EEEEecCCeEEEEeccc-------------------------hh--hhheecCCCCcccceEEecCCCCCeeEEeccCCe
Confidence 55567789999999987 33 344455 6777888888774 478999999999
Q ss_pred EEEEeCCCCeeEE--EecCCC-CceEEEEe--cCCEEEEEec----CCeEEEEEcCCCCeeE-EEEccCCCCeEEEEEcc
Q psy4876 359 VQLWDVSAKKKCR--TMDGHD-VRVGALAW--NTYILSSGSR----CGNIVHHDVRSRDHKV-ALLQNHTQEVCGLKWSP 428 (609)
Q Consensus 359 I~iwd~~~~~~~~--~l~~h~-~~V~~l~~--~~~~L~sgs~----dg~I~iwd~~~~~~~~-~~~~~h~~~V~~l~~sp 428 (609)
|++||++...... .+..+. .+..+++- +++++++|.. +-.|.+||++..++.+ .....|...|+++.|+|
T Consensus 96 Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP 175 (376)
T KOG1188|consen 96 VRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHP 175 (376)
T ss_pred EEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecC
Confidence 9999998765443 334454 45666766 4678888753 6779999999887634 34568999999999999
Q ss_pred -CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEE
Q psy4876 429 -DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSI 507 (609)
Q Consensus 429 -dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~ 507 (609)
+.++|++|+.||.|.|||+...... ..+.....|...|.++.|...+-.-+.+- +......+|+++.+.+...+
T Consensus 176 ~~pnlLlSGSvDGLvnlfD~~~d~Ee---DaL~~viN~~sSI~~igw~~~~ykrI~cl--TH~Etf~~~ele~~~~~~~~ 250 (376)
T KOG1188|consen 176 SDPNLLLSGSVDGLVNLFDTKKDNEE---DALLHVINHGSSIHLIGWLSKKYKRIMCL--THMETFAIYELEDGSEETWL 250 (376)
T ss_pred CCCCeEEeecccceEEeeecCCCcch---hhHHHhhcccceeeeeeeecCCcceEEEE--EccCceeEEEccCCChhhcc
Confidence 6789999999999999999865221 34445556788899999998873333333 47999999999988866554
Q ss_pred cCCC-------------CeEEEEEcCCCCeEEEEEecCCCeEEEEECC------CCceEEEEeC-CCCCEEEEEEeCCCC
Q psy4876 508 DTKS-------------QVCALLWNSDYKELVSAHGFAQNQLIIWKYP------SLVKVAELHG-HSARVLNLAMSPDET 567 (609)
Q Consensus 508 ~~~~-------------~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~------~~~~~~~l~~-h~~~V~~l~~spdg~ 567 (609)
.... .+.......+....+++ |..-|...++-+. ..+.+..+.+ |...|.++.|...+.
T Consensus 251 ~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~-g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~ 329 (376)
T KOG1188|consen 251 ENPDVSADDLRKEDNCDYVINEHSPGDKDTCALA-GTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKND 329 (376)
T ss_pred cCccchhhhHHhhhhhhheeecccCCCcceEEEe-ccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccc
Confidence 3221 12222222233344443 4335555554332 2345566666 777889999998899
Q ss_pred EEEEEECCCCEEEEEcC
Q psy4876 568 TVLSAGADETLRLWKIF 584 (609)
Q Consensus 568 ~L~s~s~Dg~I~iWdl~ 584 (609)
.++|||.||.|.+|...
T Consensus 330 ~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 330 VLYTGGEDGLLQAWKVE 346 (376)
T ss_pred eeeccCCCceEEEEecC
Confidence 99999999999999963
No 158
>KOG4328|consensus
Probab=99.80 E-value=4.4e-18 Score=171.38 Aligned_cols=244 Identities=18% Similarity=0.262 Sum_probs=195.8
Q ss_pred CCCCeEEEEEccCC--CEEEEEeCCCeEEEEeCCCC----eeEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEc
Q psy4876 334 GNENVCSVAWIQEG--YMLGVGTSLGTVQLWDVSAK----KKCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDV 404 (609)
Q Consensus 334 h~~~V~~v~~spdg--~~Lasgs~dg~I~iwd~~~~----~~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~ 404 (609)
+.+.|++++|+|.. +.+|+|..-|.|-+||+.+. ..+..+..|..+|.+|.| +...+++.+.||+|+.-|+
T Consensus 185 ~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~ 264 (498)
T KOG4328|consen 185 TDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDF 264 (498)
T ss_pred cccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeee
Confidence 78999999999975 68899999999999999532 346677889999999999 4578999999999999999
Q ss_pred CCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEE
Q psy4876 405 RSRD-HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLA 483 (609)
Q Consensus 405 ~~~~-~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~lla 483 (609)
.... ..+..+......++++.|+.+...++.|..=|...+||+++.. .....+.-|...|..|+++|..+++++
T Consensus 265 ~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~-----s~~~~~~lh~kKI~sv~~NP~~p~~la 339 (498)
T KOG4328|consen 265 EGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDG-----SEYENLRLHKKKITSVALNPVCPWFLA 339 (498)
T ss_pred cchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCC-----ccchhhhhhhcccceeecCCCCchhee
Confidence 8753 1222333345667888999888888888887899999999874 335566678889999999999999999
Q ss_pred EEeccCCCeEEEEECCCC--c---eeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECC----CCceEEEEeCCC
Q psy4876 484 SGGGTADRHIYFWNVSSG--A---CLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYP----SLVKVAELHGHS 554 (609)
Q Consensus 484 sggGs~Dg~I~iwd~~t~--~---~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~----~~~~~~~l~~h~ 554 (609)
+++ .|++.+|||++.- + .+..+.+.-.|.+..|||.+..|++.+ .|+.|+|||.. .......+. |.
T Consensus 340 T~s--~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~--~D~~IRv~dss~~sa~~~p~~~I~-Hn 414 (498)
T KOG4328|consen 340 TAS--LDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTC--QDNEIRVFDSSCISAKDEPLGTIP-HN 414 (498)
T ss_pred ecc--cCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeec--cCCceEEeecccccccCCccceee-cc
Confidence 985 9999999999842 2 256666777999999999998888754 89999999983 344444443 32
Q ss_pred C------CEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 555 A------RVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 555 ~------~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
. ......|.|+..+|++|-.-..|-|+|-..+.
T Consensus 415 ~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q 453 (498)
T KOG4328|consen 415 NRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ 453 (498)
T ss_pred CcccccccchhheeCCCccEEEEeccCcceeEEcCCCCE
Confidence 1 24567899999999999998889999987766
No 159
>KOG0650|consensus
Probab=99.80 E-value=3.1e-18 Score=177.10 Aligned_cols=235 Identities=18% Similarity=0.300 Sum_probs=189.4
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecC----CEEEEEecCCeEEEEEc-----
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT----YILSSGSRCGNIVHHDV----- 404 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~----~~L~sgs~dg~I~iwd~----- 404 (609)
|.+.|.+++..|.|.+||+|+.||+|+||.+.+|.+++++. ..+.|.|++|++ .+|+++-... +.|.+.
T Consensus 399 Htg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~-~~ivnp~~G~~ 476 (733)
T KOG0650|consen 399 HTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGEC-VLIVNPIFGDR 476 (733)
T ss_pred cCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCc-eEEeCccccch
Confidence 99999999999999999999999999999999999999987 566899999953 3444443332 333322
Q ss_pred ----------------------------CC---CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC---CcEEEEeCCCC
Q psy4876 405 ----------------------------RS---RDHKVALLQNHTQEVCGLKWSPDGRYLASGGND---NLLNIWSGVPG 450 (609)
Q Consensus 405 ----------------------------~~---~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~D---g~I~iwd~~~~ 450 (609)
.. .+.-+.....|...|..+.|+..|.||++..-+ ..|.|+++...
T Consensus 477 ~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~ 556 (733)
T KOG0650|consen 477 LEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKR 556 (733)
T ss_pred hhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccc
Confidence 11 111123344588899999999999999998764 46899998876
Q ss_pred CCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEE
Q psy4876 451 QHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAH 529 (609)
Q Consensus 451 ~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~s 529 (609)
....-|....+.|.++.|+|....++++ ....|+|||+.....+..+..+. .|..++.+|.|..|++
T Consensus 557 ------~sQ~PF~kskG~vq~v~FHPs~p~lfVa----Tq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~-- 624 (733)
T KOG0650|consen 557 ------KSQSPFRKSKGLVQRVKFHPSKPYLFVA----TQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLIL-- 624 (733)
T ss_pred ------cccCchhhcCCceeEEEecCCCceEEEE----eccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEE--
Confidence 2333444556779999999999888876 47999999999888887776665 7899999999999999
Q ss_pred ecCCCeEEEEECCCC-ceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEE
Q psy4876 530 GFAQNQLIIWKYPSL-VKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWK 582 (609)
Q Consensus 530 G~~dg~I~Iwd~~~~-~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWd 582 (609)
|+.|+.++.||+.-. ++.+.++.|...|++|+||+.-.++++|+.||++.|+-
T Consensus 625 gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfh 678 (733)
T KOG0650|consen 625 GSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFH 678 (733)
T ss_pred ecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence 668999999999755 56677888999999999999999999999999998874
No 160
>KOG0290|consensus
Probab=99.80 E-value=2.4e-17 Score=157.41 Aligned_cols=284 Identities=14% Similarity=0.261 Sum_probs=204.8
Q ss_pred cCCceeEEEEEecCC----CeEEEEc-----CCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCC
Q psy4876 266 IQNDYYLNLIDWSHF----NVLAVAL-----GGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNE 336 (609)
Q Consensus 266 ~~~~~~v~~l~wsp~----~lla~s~-----dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~ 336 (609)
....|.+..++|+.. -.||+|. .+.|.|-.+.. +.++......++|.-
T Consensus 41 Y~ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~-----------------------~s~e~~~~a~fd~~Y 97 (364)
T KOG0290|consen 41 YNAPWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDE-----------------------DSGELVEDANFDHPY 97 (364)
T ss_pred ecCCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEcc-----------------------CCCceeccCCCCCCC
Confidence 344567889999942 3566543 46677665543 114555555567899
Q ss_pred CeEEEEEccCC-----CEEEEEeCCCeEEEEeCCCCee----EEEe-----cCCCCceEEEEe---cCCEEEEEecCCeE
Q psy4876 337 NVCSVAWIQEG-----YMLGVGTSLGTVQLWDVSAKKK----CRTM-----DGHDVRVGALAW---NTYILSSGSRCGNI 399 (609)
Q Consensus 337 ~V~~v~~spdg-----~~Lasgs~dg~I~iwd~~~~~~----~~~l-----~~h~~~V~~l~~---~~~~L~sgs~dg~I 399 (609)
+++.+.|.|+. ++||+++ ..++||.+...+. ...+ ..+..+++++.| +++++.+++-|-+.
T Consensus 98 P~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTC 175 (364)
T KOG0290|consen 98 PVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTC 175 (364)
T ss_pred CccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeE
Confidence 99999999985 4566544 4799999874221 1111 246678999999 47999999999999
Q ss_pred EEEEcCCCC--eeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcC
Q psy4876 400 VHHDVRSRD--HKVALLQNHTQEVCGLKWSPDG-RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCP 476 (609)
Q Consensus 400 ~iwd~~~~~--~~~~~~~~h~~~V~~l~~spdg-~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 476 (609)
.|||+.++. .....+-.|..+|..|+|...+ +.||+.|.||.|++||++..++. ..+..-.....+...++|++
T Consensus 176 TiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHS---TIIYE~p~~~~pLlRLswnk 252 (364)
T KOG0290|consen 176 TIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHS---TIIYEDPSPSTPLLRLSWNK 252 (364)
T ss_pred EEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccc---eEEecCCCCCCcceeeccCc
Confidence 999999852 3456677899999999999854 47999999999999999987432 23333333356788999999
Q ss_pred CCCcEEEEEeccCCCeEEEEECCC-CceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCce------EE
Q psy4876 477 WSPNVLASGGGTADRHIYFWNVSS-GACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVK------VA 548 (609)
Q Consensus 477 ~~~~llasggGs~Dg~I~iwd~~t-~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~------~~ 548 (609)
...+++|+-. .....|.|.|++. ...+..+..| +.|..++|.|.....++.+| +|.++.|||+...-. +.
T Consensus 253 qDpnymATf~-~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaG-DD~qaliWDl~q~~~~~~~dPil 330 (364)
T KOG0290|consen 253 QDPNYMATFA-MDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAG-DDCQALIWDLQQMPRENGEDPIL 330 (364)
T ss_pred CCchHHhhhh-cCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecC-CcceEEEEecccccccCCCCchh
Confidence 9999888764 4668899999995 4456666654 68999999999877666655 899999999976433 22
Q ss_pred EEeCCCCCEEEEEEeC-CCCEEEEEECCCCEEEE
Q psy4876 549 ELHGHSARVLNLAMSP-DETTVLSAGADETLRLW 581 (609)
Q Consensus 549 ~l~~h~~~V~~l~~sp-dg~~L~s~s~Dg~I~iW 581 (609)
.+. -.+.|+.+.|++ .+.+|+.+.. +.+.|-
T Consensus 331 ay~-a~~EVNqi~Ws~~~~Dwiai~~~-kkleiL 362 (364)
T KOG0290|consen 331 AYT-AGGEVNQIQWSSSQPDWIAICFG-KKLEIL 362 (364)
T ss_pred hhh-ccceeeeeeecccCCCEEEEEec-CeeeEE
Confidence 222 457799999996 4567776654 444443
No 161
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.79 E-value=1.6e-16 Score=165.87 Aligned_cols=273 Identities=12% Similarity=0.178 Sum_probs=181.8
Q ss_pred EEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEe-CCCeEEE
Q psy4876 283 LAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGT-SLGTVQL 361 (609)
Q Consensus 283 la~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs-~dg~I~i 361 (609)
++.+.++.|++|++.+. +.+..+..+.+.+....++++|++++|++++ .++.|.+
T Consensus 6 ~~~~~~~~I~~~~~~~~------------------------g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~ 61 (330)
T PRK11028 6 IASPESQQIHVWNLNHE------------------------GALTLLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLS 61 (330)
T ss_pred EEcCCCCCEEEEEECCC------------------------CceeeeeEEecCCCCccEEECCCCCEEEEEECCCCcEEE
Confidence 44567899999999641 4555556665556788899999999987765 4788999
Q ss_pred EeCCC-Cee--EEEecCCCCceEEEEec--CCEEEEEe-cCCeEEEEEcCCCCe---eEEEEccCCCCeEEEEEccCCCE
Q psy4876 362 WDVSA-KKK--CRTMDGHDVRVGALAWN--TYILSSGS-RCGNIVHHDVRSRDH---KVALLQNHTQEVCGLKWSPDGRY 432 (609)
Q Consensus 362 wd~~~-~~~--~~~l~~h~~~V~~l~~~--~~~L~sgs-~dg~I~iwd~~~~~~---~~~~~~~h~~~V~~l~~spdg~~ 432 (609)
|++.. ++. +.... .......++|+ +++|++++ .++.|.+|++..... .+..+. +.....+++++|+|++
T Consensus 62 ~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~ 139 (330)
T PRK11028 62 YRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRT 139 (330)
T ss_pred EEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCE
Confidence 99973 332 22222 23345678884 67777665 488999999974321 222222 3345677899999998
Q ss_pred EEEEe-CCCcEEEEeCCCCCCCCC-ccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC--Cc--eeEE
Q psy4876 433 LASGG-NDNLLNIWSGVPGQHTFS-TQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS--GA--CLDS 506 (609)
Q Consensus 433 lasgs-~Dg~I~iwd~~~~~~~~~-~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t--~~--~~~~ 506 (609)
+++++ .++.|.+||+.+...... ......... ......++|+|++..++++.. .++.|.+||+.. ++ .+..
T Consensus 140 l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~--~~~~v~v~~~~~~~~~~~~~~~ 216 (330)
T PRK11028 140 LWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNE--LNSSVDVWQLKDPHGEIECVQT 216 (330)
T ss_pred EEEeeCCCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEEEEEec--CCCEEEEEEEeCCCCCEEEEEE
Confidence 86555 569999999976321100 000111111 234578999999987777653 589999999973 33 2333
Q ss_pred EcCC-------CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC---CCCEEEEEEeCCCCEEEEEEC-C
Q psy4876 507 IDTK-------SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH---SARVLNLAMSPDETTVLSAGA-D 575 (609)
Q Consensus 507 ~~~~-------~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h---~~~V~~l~~spdg~~L~s~s~-D 575 (609)
+... .....+.++|++++++++. ..++.|.+|++........+.+| ......+.|+|||++|+++.. +
T Consensus 217 ~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~-~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~ 295 (330)
T PRK11028 217 LDMMPADFSDTRWAADIHITPDGRHLYACD-RTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKS 295 (330)
T ss_pred EecCCCcCCCCccceeEEECCCCCEEEEec-CCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccC
Confidence 3211 1234688999999999863 35789999998654322222222 124568899999999998775 8
Q ss_pred CCEEEEEcCC
Q psy4876 576 ETLRLWKIFE 585 (609)
Q Consensus 576 g~I~iWdl~~ 585 (609)
++|.+|++..
T Consensus 296 ~~v~v~~~~~ 305 (330)
T PRK11028 296 HHISVYEIDG 305 (330)
T ss_pred CcEEEEEEcC
Confidence 9999999863
No 162
>KOG2445|consensus
Probab=99.79 E-value=4.7e-17 Score=156.66 Aligned_cols=251 Identities=16% Similarity=0.281 Sum_probs=188.1
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC-
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE- 346 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd- 346 (609)
-|+++.|..-| +++++.|++|.|||.... .+......... |++.|..|.|.+-
T Consensus 15 lihdVs~D~~GRRmAtCSsDq~vkI~d~~~~-----------------------s~~W~~Ts~Wrah~~Si~rV~WAhPE 71 (361)
T KOG2445|consen 15 LIHDVSFDFYGRRMATCSSDQTVKIWDSTSD-----------------------SGTWSCTSSWRAHDGSIWRVVWAHPE 71 (361)
T ss_pred eeeeeeecccCceeeeccCCCcEEEEeccCC-----------------------CCceEEeeeEEecCCcEEEEEecCcc
Confidence 47888888765 888999999999997541 15666666666 9999999999763
Q ss_pred -CCEEEEEeCCCeEEEEeCCC---------CeeEEEecCCCCceEEEEec----CCEEEEEecCCeEEEEEcCCCCe---
Q psy4876 347 -GYMLGVGTSLGTVQLWDVSA---------KKKCRTMDGHDVRVGALAWN----TYILSSGSRCGNIVHHDVRSRDH--- 409 (609)
Q Consensus 347 -g~~Lasgs~dg~I~iwd~~~---------~~~~~~l~~h~~~V~~l~~~----~~~L~sgs~dg~I~iwd~~~~~~--- 409 (609)
|+.+|+++.|+++.||.-.. -....++......|+.+.|. |-.|++++.||.++||+.-....
T Consensus 72 fGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~ 151 (361)
T KOG2445|consen 72 FGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQ 151 (361)
T ss_pred ccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCcccccc
Confidence 79999999999999997631 12455677788899999993 67899999999999998754321
Q ss_pred --eEEE-------EccCCCCeEEEEEccC---CCEEEEEeCC-----CcEEEEeCCCCCCCCCccceEeecCCcccEEEE
Q psy4876 410 --KVAL-------LQNHTQEVCGLKWSPD---GRYLASGGND-----NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI 472 (609)
Q Consensus 410 --~~~~-------~~~h~~~V~~l~~spd---g~~lasgs~D-----g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l 472 (609)
.... ...+.....|+.|+|. ..+||+|+.+ +.++||...... .....+.++.+|..+|++|
T Consensus 152 W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~--rKw~kva~L~d~~dpI~di 229 (361)
T KOG2445|consen 152 WTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENG--RKWLKVAELPDHTDPIRDI 229 (361)
T ss_pred chhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCc--ceeeeehhcCCCCCcceee
Confidence 1111 1246778899999983 4578888876 478999876552 1235667778999999999
Q ss_pred EEcCCCC---cEEEEEeccCCCeEEEEECCCC--------------------ceeEEEcC-CCCeEEEEEcCCCCeEEEE
Q psy4876 473 AWCPWSP---NVLASGGGTADRHIYFWNVSSG--------------------ACLDSIDT-KSQVCALLWNSDYKELVSA 528 (609)
Q Consensus 473 ~~sp~~~---~llasggGs~Dg~I~iwd~~t~--------------------~~~~~~~~-~~~v~sl~~s~~g~~l~~~ 528 (609)
+|.|.-. +++|++ +.|| |+||++... +.+..+.. .++|..+.|+-.|..|.++
T Consensus 230 ~wAPn~Gr~y~~lAvA--~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsSt 306 (361)
T KOG2445|consen 230 SWAPNIGRSYHLLAVA--TKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSST 306 (361)
T ss_pred eeccccCCceeeEEEe--ecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeec
Confidence 9999643 477777 4799 999998731 12233433 4599999999999999885
Q ss_pred EecCCCeEEEEECC---CCceEEEEe
Q psy4876 529 HGFAQNQLIIWKYP---SLVKVAELH 551 (609)
Q Consensus 529 sG~~dg~I~Iwd~~---~~~~~~~l~ 551 (609)
++||.|++|... ..+++..+.
T Consensus 307 --GdDG~VRLWkany~n~~kC~sv~~ 330 (361)
T KOG2445|consen 307 --GDDGCVRLWKANYNNLWKCTSVLK 330 (361)
T ss_pred --CCCceeeehhhhhhhhheeeeEEe
Confidence 389999999853 344555554
No 163
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.78 E-value=1.1e-15 Score=160.64 Aligned_cols=278 Identities=29% Similarity=0.535 Sum_probs=215.9
Q ss_pred eeEEEEEecCCC-eE-EEEc-CCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 270 YYLNLIDWSHFN-VL-AVAL-GGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 270 ~~v~~l~wsp~~-ll-a~s~-dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
..|..++|+|++ .+ +++. ++.+++|+... +. .+..+. |...|.+++|+|
T Consensus 156 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~--~~~~~~~~~~~v~~~~~~~ 208 (466)
T COG2319 156 ESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT-------------------------GK--PLSTLAGHTDPVSSLAFSP 208 (466)
T ss_pred ccEEEEEECCCCCEEEecCCCCCceEEEEcCC-------------------------Cc--eEEeeccCCCceEEEEEcC
Confidence 457789999997 34 4443 99999999976 22 223333 889999999999
Q ss_pred CCC-EEEEEeCCCeEEEEeCCCCeeEE-EecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCe
Q psy4876 346 EGY-MLGVGTSLGTVQLWDVSAKKKCR-TMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEV 421 (609)
Q Consensus 346 dg~-~Lasgs~dg~I~iwd~~~~~~~~-~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V 421 (609)
++. .+++++.|+.|++||...+..+. .+.+|...+ ...| ++..+++++.|+.+++|++.........+..|...|
T Consensus 209 ~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v 287 (466)
T COG2319 209 DGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSV 287 (466)
T ss_pred CcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccE
Confidence 997 55555899999999998888887 688888874 3355 567888999999999999997654344446789999
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEee--cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC
Q psy4876 422 CGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL--SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS 499 (609)
Q Consensus 422 ~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~--~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~ 499 (609)
.++.|+|++..+++++.|+.+.+||.... ...... ..|...+..+.| ......++.++ ..|+.+.+|++.
T Consensus 288 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~d~~~~~~~~~ 359 (466)
T COG2319 288 LSVAFSPDGKLLASGSSDGTVRLWDLETG------KLLSSLTLKGHEGPVSSLSF-SPDGSLLVSGG-SDDGTIRLWDLR 359 (466)
T ss_pred EEEEECCCCCEEEEeeCCCcEEEEEcCCC------ceEEEeeecccCCceEEEEE-CCCCCEEEEee-cCCCcEEeeecC
Confidence 99999998888888999999999988876 333333 367778999999 43213444442 467999999999
Q ss_pred CCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEE
Q psy4876 500 SGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLR 579 (609)
Q Consensus 500 t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~ 579 (609)
.............+..+.+.+ . ......+..++.+.+|+............+...+....+++++..+++++.++.++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (466)
T COG2319 360 TGKPLKTLEGHSNVLSVSFSP-D-GRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIR 437 (466)
T ss_pred CCceeEEecCCceEEEEEECC-C-CCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEE
Confidence 877444444444489999999 6 55544456899999999998888777765547899999999999999999999999
Q ss_pred EEEcCC
Q psy4876 580 LWKIFE 585 (609)
Q Consensus 580 iWdl~~ 585 (609)
+|++..
T Consensus 438 ~~~~~~ 443 (466)
T COG2319 438 LWDLKT 443 (466)
T ss_pred EEeccC
Confidence 999988
No 164
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.78 E-value=1.6e-15 Score=159.44 Aligned_cols=280 Identities=31% Similarity=0.534 Sum_probs=216.3
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec--CCCCeEEEEE-
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE--GNENVCSVAW- 343 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--h~~~V~~v~~- 343 (609)
...+..+.+.+.+ ++.++.|+.+.+|+... +. ..+..+. +...+..+.+
T Consensus 65 ~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~-------------------------~~-~~~~~~~~~~~~~~~~~~~~ 118 (466)
T COG2319 65 EDSITSIAFSPDGELLLSGSSDGTIKLWDLDN-------------------------GE-KLIKSLEGLHDSSVSKLALS 118 (466)
T ss_pred cceEEEEEECCCCcEEEEecCCCcEEEEEcCC-------------------------Cc-eeEEEEeccCCCceeeEEEE
Confidence 4457788888875 55566799999999987 32 1222222 2236777777
Q ss_pred ccCCC-EEEEEeC-CCeEEEEeCCC-CeeEEEecCCCCceEEEEe--cCCEEEEEec-CCeEEEEEcCCCCeeEEEEccC
Q psy4876 344 IQEGY-MLGVGTS-LGTVQLWDVSA-KKKCRTMDGHDVRVGALAW--NTYILSSGSR-CGNIVHHDVRSRDHKVALLQNH 417 (609)
Q Consensus 344 spdg~-~Lasgs~-dg~I~iwd~~~-~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~-dg~I~iwd~~~~~~~~~~~~~h 417 (609)
.+++. +++..+. |+.+.+|+... ......+..|...|..++| ++..+++++. |+.+.+|++... ..+..+.+|
T Consensus 119 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 197 (466)
T COG2319 119 SPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTG-KPLSTLAGH 197 (466)
T ss_pred CCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCC-ceEEeeccC
Confidence 77777 5555444 89999999998 7888999999999999999 4567888875 999999999984 477788889
Q ss_pred CCCeEEEEEccCCC-EEEEEeCCCcEEEEeCCCCCCCCCccceE-eecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEE
Q psy4876 418 TQEVCGLKWSPDGR-YLASGGNDNLLNIWSGVPGQHTFSTQPIH-SLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYF 495 (609)
Q Consensus 418 ~~~V~~l~~spdg~-~lasgs~Dg~I~iwd~~~~~~~~~~~~~~-~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~i 495 (609)
...|.+++|+|++. .+++++.|+.|++||...+ ..+. .+..|...+ ...|++++ .+++++ +.|+.+++
T Consensus 198 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~------~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~--~~d~~~~~ 267 (466)
T COG2319 198 TDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTG------KLLRSTLSGHSDSV-VSSFSPDG-SLLASG--SSDGTIRL 267 (466)
T ss_pred CCceEEEEEcCCcceEEEEecCCCcEEEEECCCC------cEEeeecCCCCcce-eEeECCCC-CEEEEe--cCCCcEEE
Confidence 99999999999998 5555599999999988855 4555 577787775 44899988 455554 48999999
Q ss_pred EECCCCce-eEEE-cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe--CCCCCEEEEEEeCCCCEEEE
Q psy4876 496 WNVSSGAC-LDSI-DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH--GHSARVLNLAMSPDETTVLS 571 (609)
Q Consensus 496 wd~~t~~~-~~~~-~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~--~h~~~V~~l~~spdg~~L~s 571 (609)
||+..... +..+ .+...+.++.|.|++..+++ .+ .|+.+.+|+........... .|...|..+.|.+++..++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (466)
T COG2319 268 WDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLAS-GS-SDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVS 345 (466)
T ss_pred eeecCCCcEEEEEecCCccEEEEEECCCCCEEEE-ee-CCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEE
Confidence 99986664 4444 33468999999998888888 34 55889999998887777665 78888999999434356666
Q ss_pred E-ECCCCEEEEEcCCCc
Q psy4876 572 A-GADETLRLWKIFEKV 587 (609)
Q Consensus 572 ~-s~Dg~I~iWdl~~~~ 587 (609)
+ ..|+.+.+|++....
T Consensus 346 ~~~~d~~~~~~~~~~~~ 362 (466)
T COG2319 346 GGSDDGTIRLWDLRTGK 362 (466)
T ss_pred eecCCCcEEeeecCCCc
Confidence 5 688999999998876
No 165
>KOG2919|consensus
Probab=99.78 E-value=3.6e-17 Score=158.27 Aligned_cols=246 Identities=19% Similarity=0.321 Sum_probs=182.5
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC----e--------eEEEec-CCCCceEEEEe---------cCCEEEEE
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK----K--------KCRTMD-GHDVRVGALAW---------NTYILSSG 393 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~----~--------~~~~l~-~h~~~V~~l~~---------~~~~L~sg 393 (609)
.....+.|+|||..|++-+.|..+.+|++... + ...++. .....|...+| +..++++.
T Consensus 50 nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~s 129 (406)
T KOG2919|consen 50 NFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVS 129 (406)
T ss_pred hhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeec
Confidence 34557899999999999999999999988521 0 111111 13456777777 24788999
Q ss_pred ecCCeEEEEEcCCCCeeEEEEc--cCCCC---eEEEEEccCCCEEEEEeCCCcEEEEeC-CCCCCCCCccceEe-ecCCc
Q psy4876 394 SRCGNIVHHDVRSRDHKVALLQ--NHTQE---VCGLKWSPDGRYLASGGNDNLLNIWSG-VPGQHTFSTQPIHS-LSRHQ 466 (609)
Q Consensus 394 s~dg~I~iwd~~~~~~~~~~~~--~h~~~---V~~l~~spdg~~lasgs~Dg~I~iwd~-~~~~~~~~~~~~~~-~~~h~ 466 (609)
+++.-|++||.-++. ....+. .|..+ ..+++|+|||.+|+.|.. ++|+++|+ +.|........+.. -.+..
T Consensus 130 sr~~PIh~wdaftG~-lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk-rcirvFdt~RpGr~c~vy~t~~~~k~gq~ 207 (406)
T KOG2919|consen 130 SRDQPIHLWDAFTGK-LRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK-RCIRVFDTSRPGRDCPVYTTVTKGKFGQK 207 (406)
T ss_pred cccCceeeeeccccc-cccchhhhhhHHhhhhheeEEecCCCCeEeeccc-ceEEEeeccCCCCCCcchhhhhccccccc
Confidence 999999999999874 333333 24333 457999999999998765 89999999 55532111111111 22346
Q ss_pred ccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC-C
Q psy4876 467 AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS-L 544 (609)
Q Consensus 467 ~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~-~ 544 (609)
+.|.+++|+|....++++|+ ....+-||.-..+.++..+..+ +.|+.+.|.++|+.|++++- .+-.|..||++. .
T Consensus 208 giisc~a~sP~~~~~~a~gs--Y~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaR-k~dkIl~WDiR~~~ 284 (406)
T KOG2919|consen 208 GIISCFAFSPMDSKTLAVGS--YGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGAR-KDDKILCWDIRYSR 284 (406)
T ss_pred ceeeeeeccCCCCcceeeec--ccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeeccccc-CCCeEEEEeehhcc
Confidence 78899999999988999874 8889999988888888877654 69999999999999999643 688899999975 4
Q ss_pred ceEEEEeCCCC-CEEE--EEEeCCCCEEEEEECCCCEEEEEcCCC
Q psy4876 545 VKVAELHGHSA-RVLN--LAMSPDETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 545 ~~~~~l~~h~~-~V~~--l~~spdg~~L~s~s~Dg~I~iWdl~~~ 586 (609)
..+..|..|.+ .-.. ....|+|++|++|+.||.|++||+...
T Consensus 285 ~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~ 329 (406)
T KOG2919|consen 285 DPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDL 329 (406)
T ss_pred chhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCC
Confidence 56667777755 2223 445689999999999999999999883
No 166
>KOG0303|consensus
Probab=99.77 E-value=7.6e-17 Score=159.74 Aligned_cols=202 Identities=17% Similarity=0.328 Sum_probs=167.2
Q ss_pred CCCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCC-------eeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEE
Q psy4876 334 GNENVCSVAWIQE-GYMLGVGTSLGTVQLWDVSAK-------KKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHH 402 (609)
Q Consensus 334 h~~~V~~v~~spd-g~~Lasgs~dg~I~iwd~~~~-------~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iw 402 (609)
|.+.|..++|+|- ...||+|+.|.+|.||++..+ +.+..+.+|..+|.-++|+ .+.|++++.|.+|.+|
T Consensus 80 Ht~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iW 159 (472)
T KOG0303|consen 80 HTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIW 159 (472)
T ss_pred ccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEE
Confidence 9999999999995 488999999999999999754 3467889999999999997 4899999999999999
Q ss_pred EcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCccc-EEEEEEcCCCCcE
Q psy4876 403 DVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA-VKAIAWCPWSPNV 481 (609)
Q Consensus 403 d~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~-V~~l~~sp~~~~l 481 (609)
++.++. .+..+. |...|.++.|+.||.+|++.+.|..|+|||.+++ ..+..-.+|.+. -..+.|-.++. +
T Consensus 160 nv~tge-ali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~------~~v~e~~~heG~k~~Raifl~~g~-i 230 (472)
T KOG0303|consen 160 NVGTGE-ALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRG------TVVSEGVAHEGAKPARAIFLASGK-I 230 (472)
T ss_pred eccCCc-eeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCC------cEeeecccccCCCcceeEEeccCc-e
Confidence 999985 444555 9999999999999999999999999999999998 666666667653 34566777775 6
Q ss_pred EEEEe-ccCCCeEEEEECCCC---ceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc
Q psy4876 482 LASGG-GTADRHIYFWNVSSG---ACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV 545 (609)
Q Consensus 482 lasgg-Gs~Dg~I~iwd~~t~---~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~ 545 (609)
+.+|- ...++.+-+||..+- -...++++.+.|.---|.++.+.++.+ |-.|+.|+-|.+....
T Consensus 231 ~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~-GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 231 FTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLC-GKGDSSIRYFEITNEP 297 (472)
T ss_pred eeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEE-ecCCcceEEEEecCCC
Confidence 66653 235789999997643 345667778888888899998888776 6789999999986654
No 167
>KOG1007|consensus
Probab=99.77 E-value=4.3e-17 Score=155.53 Aligned_cols=237 Identities=18% Similarity=0.282 Sum_probs=169.2
Q ss_pred eeeeeeec--CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCee-EEEec-----CCCCceEEEEec----CCEEEEE
Q psy4876 326 IDHLMDLE--GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKK-CRTMD-----GHDVRVGALAWN----TYILSSG 393 (609)
Q Consensus 326 ~~~l~~~~--h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~-~~~l~-----~h~~~V~~l~~~----~~~L~sg 393 (609)
++.+..+. +-+.|.||.|.|++..|++-. |..|.+|+++.+.. +..+. +|....++-+|+ ++.+++
T Consensus 112 lE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t- 189 (370)
T KOG1007|consen 112 LECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT- 189 (370)
T ss_pred hhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE-
Confidence 45555555 557999999999999888665 68899999987755 33332 255667777883 455555
Q ss_pred ecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEE
Q psy4876 394 SRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGR-YLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI 472 (609)
Q Consensus 394 s~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~-~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l 472 (609)
..|+++..||+++.......-..|...|..+.|+|+.+ +|++|+.||.|+|||.+..+ .++..+.+|...|.++
T Consensus 190 t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk-----~pv~el~~HsHWvW~V 264 (370)
T KOG1007|consen 190 TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK-----FPVQELPGHSHWVWAV 264 (370)
T ss_pred eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC-----ccccccCCCceEEEEE
Confidence 45799999999987655566678999999999999766 58999999999999999774 7899999999999999
Q ss_pred EEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC
Q psy4876 473 AWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG 552 (609)
Q Consensus 473 ~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~ 552 (609)
.|+|....|+.+|| .|..|.+|...+-.....+. |-.+....- + .+..=++=-+. ...+.++..
T Consensus 265 Rfn~~hdqLiLs~~--SDs~V~Lsca~svSSE~qi~---------~~~dese~e---~-~dseer~kpL~-dg~l~tyde 328 (370)
T KOG1007|consen 265 RFNPEHDQLILSGG--SDSAVNLSCASSVSSEQQIE---------FEDDESESE---D-EDSEERVKPLQ-DGQLETYDE 328 (370)
T ss_pred EecCccceEEEecC--CCceeEEEeccccccccccc---------cccccccCc---c-hhhHHhccccc-ccccccccc
Confidence 99999999999985 89999999875322111111 111100000 0 00000000001 123445668
Q ss_pred CCCCEEEEEEeCCCC-EEEEEECCCCEEEEEcCC
Q psy4876 553 HSARVLNLAMSPDET-TVLSAGADETLRLWKIFE 585 (609)
Q Consensus 553 h~~~V~~l~~spdg~-~L~s~s~Dg~I~iWdl~~ 585 (609)
|++.|.+++||.-.. ++|+-+.||.+.|=++..
T Consensus 329 hEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 329 HEDSVYALAWSSADPWIFASLSYDGRVIISSVPR 362 (370)
T ss_pred cccceEEEeeccCCCeeEEEeccCceEEeecCCh
Confidence 999999999998655 557789999999866643
No 168
>KOG0642|consensus
Probab=99.76 E-value=7.5e-18 Score=173.79 Aligned_cols=249 Identities=17% Similarity=0.196 Sum_probs=192.4
Q ss_pred eec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC--------CeeEEEecCCCCceEEEEe--cCCEEEEEecCCeE
Q psy4876 331 DLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSA--------KKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNI 399 (609)
Q Consensus 331 ~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~--------~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I 399 (609)
++. |.+.|+.++|.+-...|++++.||.|.+|+++. -+.+.++.+|.++|.|++. ++..+++|+.||+|
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I 368 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI 368 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence 444 889999999999999999999999999999942 2567899999999999999 78999999999999
Q ss_pred EEEEcCCC---------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC--Cccc
Q psy4876 400 VHHDVRSR---------DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR--HQAA 468 (609)
Q Consensus 400 ~iwd~~~~---------~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~--h~~~ 468 (609)
+.|++... ......+.||++.|+.+++|+....|++++.||+|++|+..... + .++.. ..+.
T Consensus 369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~------~-~~f~~~~e~g~ 441 (577)
T KOG0642|consen 369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEES------P-CTFGEPKEHGY 441 (577)
T ss_pred eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcC------c-cccCCccccCC
Confidence 99965421 12346788999999999999998899999999999999987662 2 12211 1223
Q ss_pred EEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcC--------CCCeEEEEEcCCCCeEEEEEecCCCeEEEEE
Q psy4876 469 VKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT--------KSQVCALLWNSDYKELVSAHGFAQNQLIIWK 540 (609)
Q Consensus 469 V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~--------~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd 540 (609)
-..+.+-.......++.. .-+.-.++++..+..+..+.. ...+.-+.++|.+...++++ .++.|+++|
T Consensus 442 Plsvd~~ss~~a~~~~s~--~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~h--ed~~Ir~~d 517 (577)
T KOG0642|consen 442 PLSVDRTSSRPAHSLASF--RFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAH--EDRSIRFFD 517 (577)
T ss_pred cceEeeccchhHhhhhhc--ccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecc--cCCceeccc
Confidence 345555443322222210 233333444444444444431 13578899999998888865 899999999
Q ss_pred CCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccch
Q psy4876 541 YPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSK 590 (609)
Q Consensus 541 ~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~ 590 (609)
..++..+.....|...|+++++.|+|.+|++++.|+.|++|++.......
T Consensus 518 n~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~ 567 (577)
T KOG0642|consen 518 NKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVL 567 (577)
T ss_pred ccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchheee
Confidence 99999999999999999999999999999999999999999997665443
No 169
>KOG0303|consensus
Probab=99.75 E-value=1.1e-16 Score=158.54 Aligned_cols=238 Identities=21% Similarity=0.370 Sum_probs=179.1
Q ss_pred CeEEEEEcc-----CCCEEEEE---eCCCeEEEEeCC-CCe---eEEEecCCCCceEEEEe---cCCEEEEEecCCeEEE
Q psy4876 337 NVCSVAWIQ-----EGYMLGVG---TSLGTVQLWDVS-AKK---KCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVH 401 (609)
Q Consensus 337 ~V~~v~~sp-----dg~~Lasg---s~dg~I~iwd~~-~~~---~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~i 401 (609)
.|+-+.|.. +.++||+. +..|...|.-+. +|+ ..-.+.+|.++|..++| |.+.|++|+.|.+|.|
T Consensus 29 rVs~~tWDS~fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~v 108 (472)
T KOG0303|consen 29 RVSRVTWDSSFCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMV 108 (472)
T ss_pred eeeeeeccccccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEE
Confidence 455555543 34566652 233444444332 232 23345689999999999 5689999999999999
Q ss_pred EEcCCCC------eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEE
Q psy4876 402 HDVRSRD------HKVALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAW 474 (609)
Q Consensus 402 wd~~~~~------~~~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 474 (609)
|++.... +.+..+.+|...|.-++|+| -.+.|++++.|++|.+||+.++ +.+.++. |...|.++.|
T Consensus 109 W~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tg------eali~l~-hpd~i~S~sf 181 (472)
T KOG0303|consen 109 WQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTG------EALITLD-HPDMVYSMSF 181 (472)
T ss_pred EECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCC------ceeeecC-CCCeEEEEEe
Confidence 9987543 45788999999999999999 4568999999999999999999 5566666 9999999999
Q ss_pred cCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC--CeEEEEEcCCCCeEEEEEec---CCCeEEEEECCCCceE--
Q psy4876 475 CPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS--QVCALLWNSDYKELVSAHGF---AQNQLIIWKYPSLVKV-- 547 (609)
Q Consensus 475 sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~--~v~sl~~s~~g~~l~~~sG~---~dg~I~Iwd~~~~~~~-- 547 (609)
+-+|..+..++ .|+.|+|||.++++.+..-..|. ....+.|-.+|. +++. |+ .+.++-+||....+..
T Consensus 182 n~dGs~l~Ttc---kDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~-i~tT-Gfsr~seRq~aLwdp~nl~eP~~ 256 (472)
T KOG0303|consen 182 NRDGSLLCTTC---KDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK-IFTT-GFSRMSERQIALWDPNNLEEPIA 256 (472)
T ss_pred ccCCceeeeec---ccceeEEEcCCCCcEeeecccccCCCcceeEEeccCc-eeee-ccccccccceeccCcccccCcce
Confidence 99996554443 89999999999999998875443 566778888988 3332 44 4788999998765432
Q ss_pred -EEEeCCCCCEEEEEEeCCCCEEEEEE-CCCCEEEEEcCCCc
Q psy4876 548 -AELHGHSARVLNLAMSPDETTVLSAG-ADETLRLWKIFEKV 587 (609)
Q Consensus 548 -~~l~~h~~~V~~l~~spdg~~L~s~s-~Dg~I~iWdl~~~~ 587 (609)
.++. ....|.---|.+|...|+.+| .|+.||.|.+....
T Consensus 257 ~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 257 LQELD-TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred eEEec-cCCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence 3333 345677777889988887655 59999999998776
No 170
>KOG2096|consensus
Probab=99.75 E-value=7.7e-17 Score=155.66 Aligned_cols=212 Identities=22% Similarity=0.294 Sum_probs=156.8
Q ss_pred EEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCee---EEEEccCCCCeEEEEEccCCCEE-EEEeCCCcEEE
Q psy4876 371 RTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHK---VALLQNHTQEVCGLKWSPDGRYL-ASGGNDNLLNI 444 (609)
Q Consensus 371 ~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~---~~~~~~h~~~V~~l~~spdg~~l-asgs~Dg~I~i 444 (609)
..+++|...|++++| ||..|++++.|+.|++|+++.-... .....-.-+..+.+.|.||-+-+ +++-....+++
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~v 159 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCV 159 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEE
Confidence 357899999999999 7999999999999999999864211 11111122356788999987754 44556678999
Q ss_pred EeCCCCCCCC---CccceE---eecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC-CeEEEE
Q psy4876 445 WSGVPGQHTF---STQPIH---SLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS-QVCALL 517 (609)
Q Consensus 445 wd~~~~~~~~---~~~~~~---~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~ 517 (609)
|-+....... ...... --..|...|..+-....+ .+++++ +.|..|.+|+++ |+.+..++... .-...+
T Consensus 160 yk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~-k~imsa--s~dt~i~lw~lk-Gq~L~~idtnq~~n~~aa 235 (420)
T KOG2096|consen 160 YKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNA-KYIMSA--SLDTKICLWDLK-GQLLQSIDTNQSSNYDAA 235 (420)
T ss_pred EEeeecccCCCCcccccccccccchhcccceEEEeecCCc-eEEEEe--cCCCcEEEEecC-Cceeeeecccccccccee
Confidence 9876543211 111111 123456666666665544 566666 489999999999 99999998764 677889
Q ss_pred EcCCCCeEEEEEecCCCeEEEEECC--------CCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 518 WNSDYKELVSAHGFAQNQLIIWKYP--------SLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 518 ~s~~g~~l~~~sG~~dg~I~Iwd~~--------~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
.+|+|++++++ | -.-.|++|..- .-..+..|.||...|+.++|+++...++|++.||++||||..-...
T Consensus 236 vSP~GRFia~~-g-FTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~ 312 (420)
T KOG2096|consen 236 VSPDGRFIAVS-G-FTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYE 312 (420)
T ss_pred eCCCCcEEEEe-c-CCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEe
Confidence 99999999986 3 45679999852 2345678899999999999999999999999999999999875443
No 171
>KOG0290|consensus
Probab=99.75 E-value=6.7e-17 Score=154.44 Aligned_cols=237 Identities=21% Similarity=0.344 Sum_probs=179.8
Q ss_pred ceeEEEEEecCCC-----eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeee------eecCCCC
Q psy4876 269 DYYLNLIDWSHFN-----VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLM------DLEGNEN 337 (609)
Q Consensus 269 ~~~v~~l~wsp~~-----lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~h~~~ 337 (609)
.|.++.+-|.|+. -+.++.+..++||.+...+ ....... .-++..+
T Consensus 96 ~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~~ee-----------------------~~~~~~~~L~~~kns~~~aP 152 (364)
T KOG0290|consen 96 PYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIGDEE-----------------------SRVELQSVLNNNKNSEFCAP 152 (364)
T ss_pred CCCccceEecCCccccCcchhhcccCeEEEEeccCcC-----------------------CceehhhhhccCcccccCCc
Confidence 3556667777763 2335566789999997511 1111111 1126789
Q ss_pred eEEEEEccC-CCEEEEEeCCCeEEEEeCCCCe---eEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCee
Q psy4876 338 VCSVAWIQE-GYMLGVGTSLGTVQLWDVSAKK---KCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHK 410 (609)
Q Consensus 338 V~~v~~spd-g~~Lasgs~dg~I~iwd~~~~~---~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~ 410 (609)
+++..|+.- -++|.+++-|-+..|||++++. ....+-.|...|..++|. -+.|++.+.||.+++||++..++.
T Consensus 153 lTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHS 232 (364)
T KOG0290|consen 153 LTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHS 232 (364)
T ss_pred ccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccc
Confidence 999999874 4899999999999999999863 466788999999999993 489999999999999999988765
Q ss_pred EEEEccC--CCCeEEEEEcc-CCCEEEEEeCC-CcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEe
Q psy4876 411 VALLQNH--TQEVCGLKWSP-DGRYLASGGND-NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG 486 (609)
Q Consensus 411 ~~~~~~h--~~~V~~l~~sp-dg~~lasgs~D-g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg 486 (609)
...+... ..+...++|++ |-+++|+-..| ..|.|.|++... .++..+.+|.+.|.+++|.|....-++++|
T Consensus 233 TIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~-----tpva~L~~H~a~VNgIaWaPhS~~hictaG 307 (364)
T KOG0290|consen 233 TIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPC-----TPVARLRNHQASVNGIAWAPHSSSHICTAG 307 (364)
T ss_pred eEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCC-----cceehhhcCcccccceEecCCCCceeeecC
Confidence 5555533 46788999998 66778776554 579999999763 789999999999999999999999999986
Q ss_pred ccCCCeEEEEECCCCc------eeEEEcCCCCeEEEEEcC-CCCeEEEEEecCCCeEEE
Q psy4876 487 GTADRHIYFWNVSSGA------CLDSIDTKSQVCALLWNS-DYKELVSAHGFAQNQLII 538 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t~~------~~~~~~~~~~v~sl~~s~-~g~~l~~~sG~~dg~I~I 538 (609)
.|..+.+||+...- ++..+...+.|..+.|++ ...+++++. ++.+.|
T Consensus 308 --DD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~---~kklei 361 (364)
T KOG0290|consen 308 --DDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICF---GKKLEI 361 (364)
T ss_pred --CcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEe---cCeeeE
Confidence 89999999997432 233445667899999995 456676654 344444
No 172
>KOG1273|consensus
Probab=99.74 E-value=1.1e-16 Score=154.34 Aligned_cols=194 Identities=19% Similarity=0.311 Sum_probs=159.7
Q ss_pred eEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCcc
Q psy4876 380 VGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQ 457 (609)
Q Consensus 380 V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~ 457 (609)
..|+.|+ |.+|++|+.||.|.|||+.+.. ....+.+|..+|++++||+||+.|++++.|..|.+||+..| .
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~-iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~g------s 98 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR-IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKG------S 98 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccc-hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCC------C
Confidence 6788884 8999999999999999999974 77788999999999999999999999999999999999999 6
Q ss_pred ceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE-EEcCC----CCeEEEEEcCCCCeEEEEEecC
Q psy4876 458 PIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD-SIDTK----SQVCALLWNSDYKELVSAHGFA 532 (609)
Q Consensus 458 ~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~-~~~~~----~~v~sl~~s~~g~~l~~~sG~~ 532 (609)
+++.+. ..++|....|+|...+.+++.- .+..-.+-++..+.... ..+.. ....+..|.+.|+++++ |..
T Consensus 99 ~l~rir-f~spv~~~q~hp~k~n~~va~~--~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIit--Gts 173 (405)
T KOG1273|consen 99 PLKRIR-FDSPVWGAQWHPRKRNKCVATI--MEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIIT--GTS 173 (405)
T ss_pred ceeEEE-ccCccceeeeccccCCeEEEEE--ecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEE--ecC
Confidence 777765 5789999999998877766653 45555666665422111 11111 12334468999999999 668
Q ss_pred CCeEEEEECCCCceEEEEeCCC-CCEEEEEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 533 QNQLIIWKYPSLVKVAELHGHS-ARVLNLAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 533 dg~I~Iwd~~~~~~~~~l~~h~-~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
.|.+.++|..+.+++..++-.. ..|.++.|+..|..|+.-+.|..||.|++..
T Consensus 174 KGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~d 227 (405)
T KOG1273|consen 174 KGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISD 227 (405)
T ss_pred cceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhh
Confidence 9999999999999999887655 7899999999999999999999999999873
No 173
>KOG0321|consensus
Probab=99.74 E-value=1e-16 Score=167.18 Aligned_cols=247 Identities=21% Similarity=0.284 Sum_probs=179.8
Q ss_pred EEEEEccC---CCEEEEEeCCCeEEEEeCCCCee------EEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCC
Q psy4876 339 CSVAWIQE---GYMLGVGTSLGTVQLWDVSAKKK------CRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSR 407 (609)
Q Consensus 339 ~~v~~spd---g~~Lasgs~dg~I~iwd~~~~~~------~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~ 407 (609)
.+..|++. ...||++..||.|.++|...... +.....|...|..+.| ....|++++.|.+|++||+.+.
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s 132 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS 132 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence 34666653 37899999999999999875432 3555679999999999 3578999999999999999987
Q ss_pred CeeEEE--EccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCC--------------CC---C----ccceEeec
Q psy4876 408 DHKVAL--LQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQH--------------TF---S----TQPIHSLS 463 (609)
Q Consensus 408 ~~~~~~--~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~--------------~~---~----~~~~~~~~ 463 (609)
. .+.. +.+|...|.+++|.| +...|++|+.||.|.|||++.... .. . .+.+....
T Consensus 133 ~-l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~k 211 (720)
T KOG0321|consen 133 R-LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWK 211 (720)
T ss_pred e-eecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccc
Confidence 4 4444 789999999999999 556799999999999999875421 00 0 01122333
Q ss_pred CCcccEEE---EEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc--------CC----CCeEEEEEcCCCCeEEEE
Q psy4876 464 RHQAAVKA---IAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID--------TK----SQVCALLWNSDYKELVSA 528 (609)
Q Consensus 464 ~h~~~V~~---l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~--------~~----~~v~sl~~s~~g~~l~~~ 528 (609)
.+...|.+ +.+..|. ..|+++|+ .|+.|+|||++...+..... .+ -.+.++.....|.+|++.
T Consensus 212 A~s~ti~ssvTvv~fkDe-~tlaSaga-~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~As 289 (720)
T KOG0321|consen 212 AASNTIFSSVTVVLFKDE-STLASAGA-ADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFAS 289 (720)
T ss_pred cccCceeeeeEEEEEecc-ceeeeccC-CCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEE
Confidence 44445554 4455555 46666653 79999999999765443221 12 257888888999999986
Q ss_pred EecCCCeEEEEECCCC--ceEEEEeCCCCC--EEEEEEeCCCCEEEEEECCCCEEEEEcCCCccch
Q psy4876 529 HGFAQNQLIIWKYPSL--VKVAELHGHSAR--VLNLAMSPDETTVLSAGADETLRLWKIFEKVKSK 590 (609)
Q Consensus 529 sG~~dg~I~Iwd~~~~--~~~~~l~~h~~~--V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~ 590 (609)
+ .|+.|++|++.+. .++..+.++... -..-..+||+.+|++|+.|+..++|.+...+...
T Consensus 290 C--tD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~ 353 (720)
T KOG0321|consen 290 C--TDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPP 353 (720)
T ss_pred e--cCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCCh
Confidence 5 7999999999764 344455544321 1223468999999999999999999998876543
No 174
>KOG4227|consensus
Probab=99.74 E-value=3.7e-16 Score=154.29 Aligned_cols=286 Identities=17% Similarity=0.270 Sum_probs=211.1
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccC
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQE 346 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spd 346 (609)
.-+||+|.||.++ ++++|.|..+++|+++.. ......+...+..-.|...|.|++|.-.
T Consensus 56 ~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~-------------------~~~k~~KPI~~~~~~H~SNIF~L~F~~~ 116 (609)
T KOG4227|consen 56 TGCINALQFSHNDRFLASGGDDMHGRVWNVDEL-------------------MVRKTPKPIGVMEHPHRSNIFSLEFDLE 116 (609)
T ss_pred ccccceeeeccCCeEEeecCCcceeeeechHHH-------------------HhhcCCCCceeccCccccceEEEEEccC
Confidence 3469999999986 555888899999998751 0000022233333337799999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecC--CCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeE--EEEccCCCC
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDG--HDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKV--ALLQNHTQE 420 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~--h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~--~~~~~h~~~ 420 (609)
..+|++|..+|+|.+-|+++.+.+..+.. ..+.|..+.-+ .+.|++.+.+|.|.+||.+.....+ ..+......
T Consensus 117 N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~ 196 (609)
T KOG4227|consen 117 NRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKN 196 (609)
T ss_pred CeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCcc
Confidence 99999999999999999999888877753 23478888775 5899999999999999999765222 223344566
Q ss_pred eEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec------CCcccEEEEEEcCCCCcEEEEEeccCCCeE
Q psy4876 421 VCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS------RHQAAVKAIAWCPWSPNVLASGGGTADRHI 493 (609)
Q Consensus 421 V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~------~h~~~V~~l~~sp~~~~llasggGs~Dg~I 493 (609)
...+.|+| ...+|++.+..+-+.+||.+... .++.... .....-..+.|+|.|..+++.- ....-
T Consensus 197 F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~-----~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiR---R~~~P 268 (609)
T KOG4227|consen 197 FYTAEFHPETPALILVNSETGGPNVFDRRMQA-----RPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIR---RGKCP 268 (609)
T ss_pred ceeeeecCCCceeEEeccccCCCCceeecccc-----chHHhhhccccCcccchhhhheeeCCCCCeehhhh---ccCCC
Confidence 78889999 45678888888999999999764 2222221 1122235788999998888764 45666
Q ss_pred EEEECCCCce-eEEEcCC-------CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC---------------------
Q psy4876 494 YFWNVSSGAC-LDSIDTK-------SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL--------------------- 544 (609)
Q Consensus 494 ~iwd~~t~~~-~~~~~~~-------~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~--------------------- 544 (609)
.+||+-+..| +..+++. ..+.+++|..+.. +++ |+++-.|+||.++..
T Consensus 269 ~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~~-v~t--GSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~ 345 (609)
T KOG4227|consen 269 LYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDYT-VAT--GSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIF 345 (609)
T ss_pred EEeeeecccceeEeccCCCCcceeeeeeeeeeeeccee-eec--cCcccceEEEecCCCccccCccccCcchhhCchhhe
Confidence 7888887554 3344422 1466788887776 444 778999999998521
Q ss_pred --ceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 545 --VKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 545 --~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
..+..++||...+..+.|+|...+|++.+-...++||.-.
T Consensus 346 i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 346 IEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSDH 387 (609)
T ss_pred ecceeEEEecccccccceeecCCcceEeccchhhheeccccc
Confidence 2345678999999999999999999999999999999654
No 175
>KOG0649|consensus
Probab=99.73 E-value=1.3e-15 Score=142.30 Aligned_cols=236 Identities=17% Similarity=0.213 Sum_probs=178.3
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCC----------CeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcC
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSA----------KKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVR 405 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~----------~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~ 405 (609)
..|.+-+|+|.+++|++|..+|.|.+..+.+ ...+...++|+++|..++|...+|++|+. |.|+-|..+
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gd-G~V~gw~W~ 89 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGD-GLVYGWEWN 89 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeeccC-ceEEEeeeh
Confidence 3466778999999999999999999998853 13455668999999999998888888775 999999876
Q ss_pred CCCeeEE-------EEccC-----CCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEE
Q psy4876 406 SRDHKVA-------LLQNH-----TQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473 (609)
Q Consensus 406 ~~~~~~~-------~~~~h-----~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~ 473 (609)
...+... ....| --+|+++...|..+-++.++.|+.++-||+++| +..+.+.+|...|.++.
T Consensus 90 E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G------~i~r~~rGHtDYvH~vv 163 (325)
T KOG0649|consen 90 EEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDG------RIQREYRGHTDYVHSVV 163 (325)
T ss_pred hhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCC------EEEEEEcCCcceeeeee
Confidence 4321110 01112 246889999997777777778999999999999 78899999999999998
Q ss_pred EcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC---------CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC
Q psy4876 474 WCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS---------QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL 544 (609)
Q Consensus 474 ~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~---------~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~ 544 (609)
--.....+| +| ++||++++||+++++++..+.... .-.-.+..-+..+++++ ....+.+|+++..
T Consensus 164 ~R~~~~qil-sG--~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCG---gGp~lslwhLrss 237 (325)
T KOG0649|consen 164 GRNANGQIL-SG--AEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCG---GGPKLSLWHLRSS 237 (325)
T ss_pred ecccCccee-ec--CCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEec---CCCceeEEeccCC
Confidence 844343444 54 499999999999999999886321 11123444456677763 3578999999999
Q ss_pred ceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 545 VKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 545 ~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
++...+. -..+|..+.|- ...+++++..+.|.-|.+....
T Consensus 238 e~t~vfp-ipa~v~~v~F~--~d~vl~~G~g~~v~~~~l~Gvl 277 (325)
T KOG0649|consen 238 ESTCVFP-IPARVHLVDFV--DDCVLIGGEGNHVQSYTLNGVL 277 (325)
T ss_pred CceEEEe-cccceeEeeee--cceEEEeccccceeeeeeccEE
Confidence 8888775 34668888884 4478888888888888876543
No 176
>KOG0322|consensus
Probab=99.72 E-value=1.6e-16 Score=150.13 Aligned_cols=291 Identities=19% Similarity=0.257 Sum_probs=199.2
Q ss_pred CCccccccCCccCCceeEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec
Q psy4876 255 LTADRILDAPEIQNDYYLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE 333 (609)
Q Consensus 255 ~~p~~il~ap~~~~~~~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 333 (609)
..|.-+|. | +...|+++.|-.++ ++++..-|.|.+|++.+ ..-....++.
T Consensus 4 PdP~fvLR-p---~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt-------------------------~r~~~~~r~~ 54 (323)
T KOG0322|consen 4 PDPFFVLR-P---HSSSVTSVLFQANERLMSGLSVGIVKMWVLQT-------------------------ERDLPLIRLF 54 (323)
T ss_pred CCCeeEec-c---ccchheehhhccchhhhcccccceEEEEEeec-------------------------Cccchhhhhh
Confidence 34445554 2 23457888887765 88899999999999998 5555555544
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCC-eEEEEEcC-------
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCG-NIVHHDVR------- 405 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg-~I~iwd~~------- 405 (609)
+...|+.+...|+ ..|.+-+.|+.+.+|++.-+..+.. |.-.+.++.|-..-+...+... ....++-+
T Consensus 55 g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i---~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~ 130 (323)
T KOG0322|consen 55 GRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAFISI---HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHK 130 (323)
T ss_pred ccceeeceeecCC-cchhhcCCCceEEEEEccCcceEEE---eeeeccccccccceeccCCCcchhheecCCcccchhhh
Confidence 7889999999987 5677888999999999986544332 3344455555222222211111 11111111
Q ss_pred --CCC-eeEEEE----ccCCCCeEEEEEcc-CCC--EEEEEeCCCcEEEEeCCCCCCCCC----ccceEeecCCcccEEE
Q psy4876 406 --SRD-HKVALL----QNHTQEVCGLKWSP-DGR--YLASGGNDNLLNIWSGVPGQHTFS----TQPIHSLSRHQAAVKA 471 (609)
Q Consensus 406 --~~~-~~~~~~----~~h~~~V~~l~~sp-dg~--~lasgs~Dg~I~iwd~~~~~~~~~----~~~~~~~~~h~~~V~~ 471 (609)
.+. ..+... .+..+.+.+..|.. ++. +++.|-++|.|.+||+..+..... .+.+.....|..+|.+
T Consensus 131 ~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvls 210 (323)
T KOG0322|consen 131 QDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLS 210 (323)
T ss_pred hccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCccee
Confidence 111 111111 12345677777544 333 467788899999999998732211 1233445678999999
Q ss_pred EEEcCCCCcEEEEEeccCCCeEEEEECCC--CceeE--EEc-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCce
Q psy4876 472 IAWCPWSPNVLASGGGTADRHIYFWNVSS--GACLD--SID-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVK 546 (609)
Q Consensus 472 l~~sp~~~~llasggGs~Dg~I~iwd~~t--~~~~~--~~~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~ 546 (609)
+.+.+.-..- ++| ..+..+..|++.. +.+.. .+. .+..+..+..-||++.++++. .|+.|+||..+++.+
T Consensus 211 ldyas~~~rG-isg--ga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAG--WD~RiRVyswrtl~p 285 (323)
T KOG0322|consen 211 LDYASSCDRG-ISG--GADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAG--WDHRIRVYSWRTLNP 285 (323)
T ss_pred eeechhhcCC-cCC--CccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecc--cCCcEEEEEeccCCc
Confidence 9998643322 333 3788888998863 43322 222 345788999999999999964 899999999999999
Q ss_pred EEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEc
Q psy4876 547 VAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583 (609)
Q Consensus 547 ~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl 583 (609)
+..++-|.+.|++++|+||..++|+|+.|+.|.+|++
T Consensus 286 LAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 286 LAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred hhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 9999999999999999999999999999999999997
No 177
>KOG1524|consensus
Probab=99.71 E-value=5.7e-16 Score=158.57 Aligned_cols=257 Identities=16% Similarity=0.244 Sum_probs=187.0
Q ss_pred EEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEcc-----
Q psy4876 272 LNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQ----- 345 (609)
Q Consensus 272 v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~sp----- 345 (609)
|.++.|+.+. ++.++.|..+.+|.-.+. .-..+..+..+.-.+.+-.-+
T Consensus 17 vc~v~w~~~eei~~~~dDh~~~~~~~~~~-------------------------~s~~~~~~p~df~pt~~h~~~rs~~~ 71 (737)
T KOG1524|consen 17 VCCVDWSSNEEIYFVSDDHQIFKWSDVSR-------------------------DSVEVAKLPDDFVPTDMHLGGRSSGG 71 (737)
T ss_pred EEeecccccceEEEeccCceEEEeecccc-------------------------hhhhhhhCCcccCCccccccccccCC
Confidence 4689998874 888888888877765441 111111111111111111111
Q ss_pred --CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCe
Q psy4876 346 --EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEV 421 (609)
Q Consensus 346 --dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V 421 (609)
....|+.++.||.+.|.+- .++..+.+..|.+.+.+-.| +|.-|+++++||.|++|.-... ...++......|
T Consensus 72 g~~~d~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM--LRStl~Q~~~~v 148 (737)
T KOG1524|consen 72 GKGSDTLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM--LRSTVVQNEESI 148 (737)
T ss_pred CCCcceEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccch--HHHHHhhcCcee
Confidence 1267888999999999874 46777888999999999999 5889999999999999986542 444555667889
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC
Q psy4876 422 CGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG 501 (609)
Q Consensus 422 ~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~ 501 (609)
.|++|.|+.+-++.+. .+.+.|=.+... ..+..+..|.+-|.++.|++.. .++++|| .|-..++||-...
T Consensus 149 ~c~~W~p~S~~vl~c~-g~h~~IKpL~~n------~k~i~WkAHDGiiL~~~W~~~s-~lI~sgG--ED~kfKvWD~~G~ 218 (737)
T KOG1524|consen 149 RCARWAPNSNSIVFCQ-GGHISIKPLAAN------SKIIRWRAHDGLVLSLSWSTQS-NIIASGG--EDFRFKIWDAQGA 218 (737)
T ss_pred EEEEECCCCCceEEec-CCeEEEeecccc------cceeEEeccCcEEEEeecCccc-cceeecC--CceeEEeecccCc
Confidence 9999999887766654 367777777665 5667888999999999999976 6888886 9999999997654
Q ss_pred ceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 502 ACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 502 ~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
....+-.+..+|++++|.|+ +.++.. .-+++++ -....+.|..++||+||..++.|+..|.|.+=
T Consensus 219 ~Lf~S~~~ey~ITSva~npd-~~~~v~---S~nt~R~-----------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A 283 (737)
T KOG1524|consen 219 NLFTSAAEEYAITSVAFNPE-KDYLLW---SYNTARF-----------SSPRVGSIFNLSWSADGTQATCGTSTGQLIVA 283 (737)
T ss_pred ccccCChhccceeeeeeccc-cceeee---eeeeeee-----------cCCCccceEEEEEcCCCceeeccccCceEEEe
Confidence 44444455679999999999 444442 2344441 12356789999999999999999999988653
No 178
>KOG1517|consensus
Probab=99.70 E-value=2.4e-15 Score=164.58 Aligned_cols=277 Identities=17% Similarity=0.211 Sum_probs=192.7
Q ss_pred EEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec--CCCCeEEEEEccC--CC
Q psy4876 275 IDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE--GNENVCSVAWIQE--GY 348 (609)
Q Consensus 275 l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--h~~~V~~v~~spd--g~ 348 (609)
+.++|-. ++++.....|+|||.+. ++.-.-+... ....|+.+.+..+ ..
T Consensus 1070 ~~~hpf~p~i~~ad~r~~i~vwd~e~-------------------------~~~l~~F~n~~~~~t~Vs~l~liNe~D~a 1124 (1387)
T KOG1517|consen 1070 LKFHPFEPQIAAADDRERIRVWDWEK-------------------------GRLLNGFDNGAFPDTRVSDLELINEQDDA 1124 (1387)
T ss_pred eeecCCCceeEEcCCcceEEEEeccc-------------------------CceeccccCCCCCCCccceeeeecccchh
Confidence 4555532 44444456899999987 3321111111 4578999998653 47
Q ss_pred EEEEEeCCCeEEEEeCCC-----CeeEEEecC-------CCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCeeEEE
Q psy4876 349 MLGVGTSLGTVQLWDVSA-----KKKCRTMDG-------HDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDHKVAL 413 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~-----~~~~~~l~~-------h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~~~~~ 413 (609)
+|.+|+.||.|+||+-.. .+.+....+ ..+.-.-+.| +|+++++| .-..|+|||..... .+..
T Consensus 1125 LlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tG-d~r~IRIWDa~~E~-~~~d 1202 (1387)
T KOG1517|consen 1125 LLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTG-DVRSIRIWDAHKEQ-VVAD 1202 (1387)
T ss_pred heeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecC-CeeEEEEEecccce-eEee
Confidence 899999999999997432 233333221 1122244677 35555555 47899999998753 3333
Q ss_pred E-ccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCccc--EEEEEEcCCCCcEEEEEeccC
Q psy4876 414 L-QNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA--VKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 414 ~-~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~--V~~l~~sp~~~~llasggGs~ 489 (609)
+ .+....|+++.-+- .|+.|++|..||.|++||.+..... ..+.....|+.. |..+.+.+.|-.-+++| +.
T Consensus 1203 iP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~d---s~v~~~R~h~~~~~Iv~~slq~~G~~elvSg--s~ 1277 (1387)
T KOG1517|consen 1203 IPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPD---SLVCVYREHNDVEPIVHLSLQRQGLGELVSG--SQ 1277 (1387)
T ss_pred cccCCCccceeecccccCCceEEEeecCCceEEeecccCCcc---ccceeecccCCcccceeEEeecCCCcceeee--cc
Confidence 3 34455677665443 5799999999999999999876322 467777888887 99999999776657776 59
Q ss_pred CCeEEEEECCCCceeE--EEc----CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC-------CCC
Q psy4876 490 DRHIYFWNVSSGACLD--SID----TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH-------SAR 556 (609)
Q Consensus 490 Dg~I~iwd~~t~~~~~--~~~----~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h-------~~~ 556 (609)
||.|++||++...... ++. .++.++++..+++...+++ |+. +.|.||++. |+.+..++.+ .+.
T Consensus 1278 ~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAs--Gs~-q~ikIy~~~-G~~l~~~k~n~~F~~q~~gs 1353 (1387)
T KOG1517|consen 1278 DGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIAS--GSA-QLIKIYSLS-GEQLNIIKYNPGFMGQRIGS 1353 (1387)
T ss_pred CCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeee--cCc-ceEEEEecC-hhhhcccccCcccccCcCCC
Confidence 9999999999743222 222 2446999999999999998 434 999999974 3333333322 356
Q ss_pred EEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 557 VLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 557 V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
+.|++|||-.-.||+|+.|.+|.||.+....
T Consensus 1354 ~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1354 VSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred cceeeecchhHhhhhccCCceEEEeecCCcC
Confidence 7999999999999999999999999987654
No 179
>KOG1587|consensus
Probab=99.70 E-value=2.1e-15 Score=162.99 Aligned_cols=251 Identities=20% Similarity=0.299 Sum_probs=182.3
Q ss_pred CCccccccCCccCCceeEEEEEecCCC---eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeee-
Q psy4876 255 LTADRILDAPEIQNDYYLNLIDWSHFN---VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLM- 330 (609)
Q Consensus 255 ~~p~~il~ap~~~~~~~v~~l~wsp~~---lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 330 (609)
..|+.++..+ ..|.++.|+|.. ++.|+.+|.|.+||+..+.... ...+.
T Consensus 233 ~~Pe~~~~~~-----s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~----------------------~s~ls~ 285 (555)
T KOG1587|consen 233 NTPELVLESP-----SEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTP----------------------PSGLSA 285 (555)
T ss_pred CCceEEEecC-----CceeEEEeccCCcceEEeeccCceEEEEEccCCCCCC----------------------Cccccc
Confidence 4566666544 248888888853 5557779999999998732110 12222
Q ss_pred -eecCCCCeEEEEEccCC--CEEEEEeCCCeEEEEeCCCCee------EEEec------CCCCceEEEEe---cCCEEEE
Q psy4876 331 -DLEGNENVCSVAWIQEG--YMLGVGTSLGTVQLWDVSAKKK------CRTMD------GHDVRVGALAW---NTYILSS 392 (609)
Q Consensus 331 -~~~h~~~V~~v~~spdg--~~Lasgs~dg~I~iwd~~~~~~------~~~l~------~h~~~V~~l~~---~~~~L~s 392 (609)
...|.++|+.+.|..+- .-+++++.||.|..|+++.-.. ..... .....+++++| ++..++.
T Consensus 286 ~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiV 365 (555)
T KOG1587|consen 286 LEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIV 365 (555)
T ss_pred ccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEE
Confidence 22389999999998764 4488999999999998864322 11111 12356788888 6789999
Q ss_pred EecCCeEEEEE---cCCCC----eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCC-CCCCCCCccceEeecC
Q psy4876 393 GSRCGNIVHHD---VRSRD----HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGV-PGQHTFSTQPIHSLSR 464 (609)
Q Consensus 393 gs~dg~I~iwd---~~~~~----~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~-~~~~~~~~~~~~~~~~ 464 (609)
|+.+|.|..-+ .+... .....+..|.+.|.++.++|=+..++..+.|-+|+||... .. .++..+..
T Consensus 366 GTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~------~Pl~~~~~ 439 (555)
T KOG1587|consen 366 GTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA------SPLLSLDS 439 (555)
T ss_pred EcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCC------Ccchhhhh
Confidence 99999988733 33322 1233556788999999999966554444449999999987 33 68888888
Q ss_pred CcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc--eeEEEcC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 465 HQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA--CLDSIDT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 465 h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~--~~~~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
+...|++++|+|..+.+++++ ..||.|.+||+.... ++.+... ....+.+.|++.|+.|++ |...|.+.+|++
T Consensus 440 ~~~~v~~vaWSptrpavF~~~--d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lav--Gd~~G~~~~~~l 515 (555)
T KOG1587|consen 440 SPDYVTDVAWSPTRPAVFATV--DGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAV--GDANGTTHILKL 515 (555)
T ss_pred ccceeeeeEEcCcCceEEEEE--cCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEE--ecCCCcEEEEEc
Confidence 888899999999999999997 489999999997443 3444433 346677888888999999 779999999998
Q ss_pred C
Q psy4876 542 P 542 (609)
Q Consensus 542 ~ 542 (609)
.
T Consensus 516 ~ 516 (555)
T KOG1587|consen 516 S 516 (555)
T ss_pred C
Confidence 5
No 180
>KOG0644|consensus
Probab=99.69 E-value=8.6e-17 Score=171.84 Aligned_cols=250 Identities=18% Similarity=0.296 Sum_probs=191.7
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
|...|.|+.|...|.++++|+.|..|+||..+++.++....||.+.|+.++. +..++++++.|..|++|.+..+ .++
T Consensus 189 H~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~-~pv 267 (1113)
T KOG0644|consen 189 HRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDG-APV 267 (1113)
T ss_pred hhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCC-chH
Confidence 8899999999999999999999999999999999999999999999999998 4678889999999999999997 588
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccce--------Eee----------------cCCcc
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPI--------HSL----------------SRHQA 467 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~--------~~~----------------~~h~~ 467 (609)
..+.+|++.|++|+|+|-. +.+.||++++||.+-.-......+. ..+ .....
T Consensus 268 svLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~ 343 (1113)
T KOG0644|consen 268 SVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNH 343 (1113)
T ss_pred HHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccc
Confidence 9999999999999999944 7788999999998811000000000 000 00011
Q ss_pred cEEEEEEcCCCCcEEEEEec---------cCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEE
Q psy4876 468 AVKAIAWCPWSPNVLASGGG---------TADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLI 537 (609)
Q Consensus 468 ~V~~l~~sp~~~~llasggG---------s~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~ 537 (609)
.+.+++|.... .+++++.+ -.+-.+++|++.+|..++.+..+. .+..+.++|-...++...| .||.+.
T Consensus 344 e~~~l~~~~~~-lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag-~dgst~ 421 (1113)
T KOG0644|consen 344 EFEQLAWRSNL-LIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAG-YDGSTI 421 (1113)
T ss_pred hhhHhhhhccc-eEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhcc-CCCceE
Confidence 12223333221 22222211 135568899999999888887665 7889999999988887766 799999
Q ss_pred EEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccch
Q psy4876 538 IWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSK 590 (609)
Q Consensus 538 Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~ 590 (609)
|||+-.+.+++...-....+.+..||+||..++....-|.+.|...-.++..+
T Consensus 422 iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s~k 474 (1113)
T KOG0644|consen 422 IWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKSQK 474 (1113)
T ss_pred eeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCCcccc
Confidence 99999988877664334567788999999999988888999998876655443
No 181
>KOG1007|consensus
Probab=99.69 E-value=1.4e-15 Score=145.39 Aligned_cols=206 Identities=24% Similarity=0.391 Sum_probs=160.4
Q ss_pred eEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEcc--CC
Q psy4876 271 YLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQ--EG 347 (609)
Q Consensus 271 ~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~sp--dg 347 (609)
.|+||.|.|++ -+++-.|..|.+|+++..+... ..+..-...++....++-+|+| +|
T Consensus 125 ~i~cvew~Pns~klasm~dn~i~l~~l~ess~~v--------------------aev~ss~s~e~~~~ftsg~WspHHdg 184 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDDNNIVLWSLDESSKIV--------------------AEVLSSESAEMRHSFTSGAWSPHHDG 184 (370)
T ss_pred ceeeEEEcCCCCeeEEeccCceEEEEcccCcchh--------------------eeecccccccccceecccccCCCCcc
Confidence 58999999985 5666669999999998732100 0000001111566788899998 67
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEec-CCCCceEEEEecC---CEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMD-GHDVRVGALAWNT---YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCG 423 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~-~h~~~V~~l~~~~---~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 423 (609)
+.+++. .|++++.||+++.++...+. .|...|..+.||+ ++|++++.||.|++||.+....++..+.+|...|.+
T Consensus 185 nqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~ 263 (370)
T KOG1007|consen 185 NQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWA 263 (370)
T ss_pred ceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEE
Confidence 888754 56899999999887666554 6999999999974 689999999999999999988899999999999999
Q ss_pred EEEcc-CCCEEEEEeCCCcEEEEeCCCCCC-----------------------CCCccceEeecCCcccEEEEEEcCCCC
Q psy4876 424 LKWSP-DGRYLASGGNDNLLNIWSGVPGQH-----------------------TFSTQPIHSLSRHQAAVKAIAWCPWSP 479 (609)
Q Consensus 424 l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~-----------------------~~~~~~~~~~~~h~~~V~~l~~sp~~~ 479 (609)
+.|+| ..+++++|+.|..|.+|....-.. ......+.++..|...|.+++|+.-.+
T Consensus 264 VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadP 343 (370)
T KOG1007|consen 264 VRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADP 343 (370)
T ss_pred EEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCC
Confidence 99999 456889999999999997653220 011123457788999999999999999
Q ss_pred cEEEEEeccCCCeEEEEECC
Q psy4876 480 NVLASGGGTADRHIYFWNVS 499 (609)
Q Consensus 480 ~llasggGs~Dg~I~iwd~~ 499 (609)
.++|+- +.||.+.|=.+.
T Consensus 344 WiFASL--SYDGRviIs~V~ 361 (370)
T KOG1007|consen 344 WIFASL--SYDGRVIISSVP 361 (370)
T ss_pred eeEEEe--ccCceEEeecCC
Confidence 999997 599999886654
No 182
>KOG1188|consensus
Probab=99.69 E-value=2.4e-15 Score=146.97 Aligned_cols=228 Identities=19% Similarity=0.274 Sum_probs=173.1
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe----cCCEEEEEecCCeEEEEEcCCCCee-EEEEccCC-CCe
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW----NTYILSSGSRCGNIVHHDVRSRDHK-VALLQNHT-QEV 421 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~----~~~~L~sgs~dg~I~iwd~~~~~~~-~~~~~~h~-~~V 421 (609)
..+|++.++|.|++||..+++.+..+.++...+..+.| .++.+.+++.||+|++||++...+. .....++. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 67899999999999999999999999999999999999 3689999999999999999987533 23344454 466
Q ss_pred EEEEEccCCCEEEEEeC----CCcEEEEeCCCCCCCCCccceEe-ecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEE
Q psy4876 422 CGLKWSPDGRYLASGGN----DNLLNIWSGVPGQHTFSTQPIHS-LSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFW 496 (609)
Q Consensus 422 ~~l~~spdg~~lasgs~----Dg~I~iwd~~~~~~~~~~~~~~~-~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iw 496 (609)
.+++..-.++.+++|+. |-.|.+||++..+ +++.. ...|...|++|.|+|..+++|++| +.||-|.+|
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~q-----q~l~~~~eSH~DDVT~lrFHP~~pnlLlSG--SvDGLvnlf 193 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQ-----QLLRQLNESHNDDVTQLRFHPSDPNLLLSG--SVDGLVNLF 193 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEecccc-----chhhhhhhhccCcceeEEecCCCCCeEEee--cccceEEee
Confidence 77777777888888864 6689999999873 33433 356999999999999999999997 599999999
Q ss_pred ECCCC----ceeEEEcCCCCeEEEEEcCCC-CeEEEEEecCCCeEEEEECCCCceEEEEeCC------------CCCEEE
Q psy4876 497 NVSSG----ACLDSIDTKSQVCALLWNSDY-KELVSAHGFAQNQLIIWKYPSLVKVAELHGH------------SARVLN 559 (609)
Q Consensus 497 d~~t~----~~~~~~~~~~~v~sl~~s~~g-~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h------------~~~V~~ 559 (609)
|+... .++.++.+.+.|..+.|..++ +.+.+.+ ......+|++..+.....+... ...+..
T Consensus 194 D~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clT--H~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~ 271 (376)
T KOG1188|consen 194 DTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLT--HMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVIN 271 (376)
T ss_pred ecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEE--ccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheee
Confidence 99744 245677778889999999876 4455543 6899999999887755444221 112222
Q ss_pred EEEeCCCCEEEEEEC-CCCEEEEEcC
Q psy4876 560 LAMSPDETTVLSAGA-DETLRLWKIF 584 (609)
Q Consensus 560 l~~spdg~~L~s~s~-Dg~I~iWdl~ 584 (609)
.....++.+.+.++. -+...++-+.
T Consensus 272 ~~~~~~~~~~~l~g~~~n~~~~~~~~ 297 (376)
T KOG1188|consen 272 EHSPGDKDTCALAGTDSNKGTIFPLV 297 (376)
T ss_pred cccCCCcceEEEeccccCceeEEEee
Confidence 222335556666665 5667666655
No 183
>KOG1445|consensus
Probab=99.68 E-value=5.7e-16 Score=161.01 Aligned_cols=230 Identities=19% Similarity=0.289 Sum_probs=170.3
Q ss_pred EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEe
Q psy4876 285 VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQ-EGYMLGVGTSLGTVQLWD 363 (609)
Q Consensus 285 ~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~sp-dg~~Lasgs~dg~I~iwd 363 (609)
.+.+|.|-||++....... + +. +-.+.....|+++.|.| |...||+++.||.|+||.
T Consensus 599 ~g~gG~iai~el~~PGrLP-------D------------gv---~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr 656 (1012)
T KOG1445|consen 599 AGSGGVIAIYELNEPGRLP-------D------------GV---MPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWR 656 (1012)
T ss_pred cCCCceEEEEEcCCCCCCC-------c------------cc---ccccccCceeeecccCCCChHHeeecccCceEEEEE
Confidence 5668999999998731110 0 11 11222567899999999 568999999999999999
Q ss_pred CCCC-------eeEEEecCCCCceEEEEecC---CEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEE
Q psy4876 364 VSAK-------KKCRTMDGHDVRVGALAWNT---YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYL 433 (609)
Q Consensus 364 ~~~~-------~~~~~l~~h~~~V~~l~~~~---~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~l 433 (609)
+..+ .....+..|...|+++.|++ +.|++++.|.+|.+||+.+. .....+.+|++.|.+++|||||+.+
T Consensus 657 ~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~-~~~~~l~gHtdqIf~~AWSpdGr~~ 735 (1012)
T KOG1445|consen 657 LTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANA-KLYSRLVGHTDQIFGIAWSPDGRRI 735 (1012)
T ss_pred eccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhh-hhhheeccCcCceeEEEECCCCcce
Confidence 8754 34567889999999999974 89999999999999999987 4677889999999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCCCCCCccceEeecCCc-ccEEEEEEcCCCCcEEEEEec-cCCCeEEEEECCCC--ceeEEE--
Q psy4876 434 ASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ-AAVKAIAWCPWSPNVLASGGG-TADRHIYFWNVSSG--ACLDSI-- 507 (609)
Q Consensus 434 asgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~-~~V~~l~~sp~~~~llasggG-s~Dg~I~iwd~~t~--~~~~~~-- 507 (609)
|+.+.||+|++|+.+.+. ++++.-.+.. ..--.|.|.-+|..++++|-. +..+.|.+||..+- ..+.+.
T Consensus 736 AtVcKDg~~rVy~Prs~e-----~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~l 810 (1012)
T KOG1445|consen 736 ATVCKDGTLRVYEPRSRE-----QPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVL 810 (1012)
T ss_pred eeeecCceEEEeCCCCCC-----CccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeee
Confidence 999999999999998774 4444433222 122467888889888887631 12467889998743 344333
Q ss_pred cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC
Q psy4876 508 DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS 543 (609)
Q Consensus 508 ~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~ 543 (609)
+....+.--.|.+|...++.. |-.|..|.+|.+-.
T Consensus 811 Dvaps~LvP~YD~Ds~~lflt-GKGD~~v~~yEv~~ 845 (1012)
T KOG1445|consen 811 DVAPSPLVPHYDYDSNVLFLT-GKGDRFVNMYEVIY 845 (1012)
T ss_pred cccCccccccccCCCceEEEe-cCCCceEEEEEecC
Confidence 333344444566676666554 66799999998743
No 184
>KOG1963|consensus
Probab=99.68 E-value=1.8e-14 Score=156.22 Aligned_cols=281 Identities=16% Similarity=0.233 Sum_probs=194.0
Q ss_pred EEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeee--eecCCCCeEEEEEccCCCE
Q psy4876 273 NLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLM--DLEGNENVCSVAWIQEGYM 349 (609)
Q Consensus 273 ~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~h~~~V~~v~~spdg~~ 349 (609)
.+|..++.+ +..+..+..+++|+...+. ...... ...|.-.+++++++|++++
T Consensus 164 ~~I~~~~~ge~~~i~~~~~~~~~~v~~~~------------------------~~~~~~~~~~~Htf~~t~~~~spn~~~ 219 (792)
T KOG1963|consen 164 KSIVDNNSGEFKGIVHMCKIHIYFVPKHT------------------------KHTSSRDITVHHTFNITCVALSPNERY 219 (792)
T ss_pred ccEEEcCCceEEEEEEeeeEEEEEecccc------------------------eeeccchhhhhhcccceeEEeccccce
Confidence 346677765 6668889999999998721 111111 2226677999999999999
Q ss_pred EEEEeCCCeEEEEeCCC----CeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEE
Q psy4876 350 LGVGTSLGTVQLWDVSA----KKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCG 423 (609)
Q Consensus 350 Lasgs~dg~I~iwd~~~----~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 423 (609)
+|+|..||.|.+|.--. ....+.+.-|...|.+++| +|.+|++|+..|.+.+|.+.++. .+.+..-.+.|..
T Consensus 220 ~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--kqfLPRLgs~I~~ 297 (792)
T KOG1963|consen 220 LAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--KQFLPRLGSPILH 297 (792)
T ss_pred EEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC--cccccccCCeeEE
Confidence 99999999999996432 2345677789999999999 79999999999999999999874 5567777899999
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEee--------cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEE
Q psy4876 424 LKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL--------SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYF 495 (609)
Q Consensus 424 l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~--------~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~i 495 (609)
+.++||+.+.+....|+.|.+....+.... ..+..+ ....+-.+.++++|.-+.++..| ..++|.+
T Consensus 298 i~vS~ds~~~sl~~~DNqI~li~~~dl~~k---~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~---~~g~vQ~ 371 (792)
T KOG1963|consen 298 IVVSPDSDLYSLVLEDNQIHLIKASDLEIK---STISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNG---HPGHVQF 371 (792)
T ss_pred EEEcCCCCeEEEEecCceEEEEeccchhhh---hhccCccCCCccccccccccceeEEEcCCCCceeecC---CCceEEE
Confidence 999999999999999999999987554211 111111 11244567788888444444443 7888999
Q ss_pred EECCCCceeEEEcC--------C----CCeEEEEEcCCCCeEEE------------------------------------
Q psy4876 496 WNVSSGACLDSIDT--------K----SQVCALLWNSDYKELVS------------------------------------ 527 (609)
Q Consensus 496 wd~~t~~~~~~~~~--------~----~~v~sl~~s~~g~~l~~------------------------------------ 527 (609)
||+.+.+.+..+.. . -.++.++.+..|.++++
T Consensus 372 ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~ 451 (792)
T KOG1963|consen 372 YDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKIN 451 (792)
T ss_pred EeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEe
Confidence 98876544433210 0 01222222222222211
Q ss_pred ---------------------EEecCCCeEEEEECCC----------CceEEEEeCCCCCEEEEEEeCCCCEEEEEECCC
Q psy4876 528 ---------------------AHGFAQNQLIIWKYPS----------LVKVAELHGHSARVLNLAMSPDETTVLSAGADE 576 (609)
Q Consensus 528 ---------------------~sG~~dg~I~Iwd~~~----------~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg 576 (609)
++.+.||.++||-+.. +.+...-.-|..+++.++|+.||. +++++.|+
T Consensus 452 ~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGs-lla~s~~~ 530 (792)
T KOG1963|consen 452 NPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGS-LLAVSFDD 530 (792)
T ss_pred cCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCc-EEEEecCC
Confidence 1133788899997722 122222223778899999999995 66677899
Q ss_pred CEEEEEcCCC
Q psy4876 577 TLRLWKIFEK 586 (609)
Q Consensus 577 ~I~iWdl~~~ 586 (609)
+|.+||..+.
T Consensus 531 ~Itiwd~~~~ 540 (792)
T KOG1963|consen 531 TITIWDYDTK 540 (792)
T ss_pred EEEEecCCCh
Confidence 9999999884
No 185
>KOG2110|consensus
Probab=99.68 E-value=1.7e-13 Score=135.39 Aligned_cols=274 Identities=15% Similarity=0.205 Sum_probs=200.0
Q ss_pred EEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEE
Q psy4876 272 LNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYML 350 (609)
Q Consensus 272 v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~L 350 (609)
++.+.|+.+. +|++|.....++++.+.. ++ ..........|..+-|+. .++
T Consensus 8 i~~~~~Nqd~~~lsvGs~~Gyk~~~~~~~------------------------~k--~~~~~~~~~~IvEmLFSS--SLv 59 (391)
T KOG2110|consen 8 INFIGFNQDSTLLSVGSKDGYKIFSCSPF------------------------EK--CFSKDTEGVSIVEMLFSS--SLV 59 (391)
T ss_pred eeeeeeccceeEEEccCCCceeEEecCch------------------------HH--hhcccCCCeEEEEeeccc--cee
Confidence 4556688885 888888888889988761 11 111111344566666664 466
Q ss_pred EEEeCC--CeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEc---cCCCCeEEEE
Q psy4876 351 GVGTSL--GTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQ---NHTQEVCGLK 425 (609)
Q Consensus 351 asgs~d--g~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~---~h~~~V~~l~ 425 (609)
|..+.+ ..++++++..+..+..+. ....|.++.+|.+.|+++-.+. |+|||+++.. .+.++. .+...++++.
T Consensus 60 aiV~~~qpr~Lkv~~~Kk~~~ICe~~-fpt~IL~VrmNr~RLvV~Lee~-IyIydI~~Mk-lLhTI~t~~~n~~gl~AlS 136 (391)
T KOG2110|consen 60 AIVSIKQPRKLKVVHFKKKTTICEIF-FPTSILAVRMNRKRLVVCLEES-IYIYDIKDMK-LLHTIETTPPNPKGLCALS 136 (391)
T ss_pred EEEecCCCceEEEEEcccCceEEEEe-cCCceEEEEEccceEEEEEccc-EEEEecccce-eehhhhccCCCccceEeec
Confidence 665544 358999998888777776 6678999999988887776654 9999999873 555543 4566688888
Q ss_pred EccCCCEEEEEe--CCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCce
Q psy4876 426 WSPDGRYLASGG--NDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC 503 (609)
Q Consensus 426 ~spdg~~lasgs--~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~ 503 (609)
+++.+.++|.-+ ..|.|.|||+.+. +++..+..|.+.+-+++|+++| .++|+++ .....||||.+.+|+.
T Consensus 137 ~n~~n~ylAyp~s~t~GdV~l~d~~nl------~~v~~I~aH~~~lAalafs~~G-~llATAS-eKGTVIRVf~v~~G~k 208 (391)
T KOG2110|consen 137 PNNANCYLAYPGSTTSGDVVLFDTINL------QPVNTINAHKGPLAALAFSPDG-TLLATAS-EKGTVIRVFSVPEGQK 208 (391)
T ss_pred cCCCCceEEecCCCCCceEEEEEcccc------eeeeEEEecCCceeEEEECCCC-CEEEEec-cCceEEEEEEcCCccE
Confidence 888888998743 3689999999988 8889999999999999999998 6888884 2344589999999999
Q ss_pred eEEEcCCC---CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc-----------------------------------
Q psy4876 504 LDSIDTKS---QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV----------------------------------- 545 (609)
Q Consensus 504 ~~~~~~~~---~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~----------------------------------- 545 (609)
+.++.-+. .|.+++|++++.+|.+++ ..++|+||.+..-.
T Consensus 209 l~eFRRG~~~~~IySL~Fs~ds~~L~~sS--~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~ 286 (391)
T KOG2110|consen 209 LYEFRRGTYPVSIYSLSFSPDSQFLAASS--NTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQ 286 (391)
T ss_pred eeeeeCCceeeEEEEEEECCCCCeEEEec--CCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhh
Confidence 99997653 789999999999998854 78999999874210
Q ss_pred --eEEEEeCCCCCE-EEEEEe--CCCCEEEEEECCCCEEEEEcCCC
Q psy4876 546 --KVAELHGHSARV-LNLAMS--PDETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 546 --~~~~l~~h~~~V-~~l~~s--pdg~~L~s~s~Dg~I~iWdl~~~ 586 (609)
.....+...+.. ..+.+. +....+..++.||.+..|.+...
T Consensus 287 ~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~ 332 (391)
T KOG2110|consen 287 SRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPPK 332 (391)
T ss_pred ccceeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCCC
Confidence 001111111111 223343 47789999999999999998753
No 186
>KOG2110|consensus
Probab=99.67 E-value=5e-14 Score=139.22 Aligned_cols=237 Identities=14% Similarity=0.238 Sum_probs=182.1
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCe--EEEEEcCCCCeeEEE
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGN--IVHHDVRSRDHKVAL 413 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~--I~iwd~~~~~~~~~~ 413 (609)
..+..+.|+.+...|.+|+.|| .++|..+..............|..+-|+..+++..+.+.. ++++++.... .+..
T Consensus 6 ~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~-~ICe 83 (391)
T KOG2110|consen 6 PTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKT-TICE 83 (391)
T ss_pred cceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCc-eEEE
Confidence 3456677999999999999998 7888877655433333445567777788888887776543 8888888764 3333
Q ss_pred EccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC---CcccEEEEEEcCCCCcEEEEEeccCC
Q psy4876 414 LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR---HQAAVKAIAWCPWSPNVLASGGGTAD 490 (609)
Q Consensus 414 ~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~---h~~~V~~l~~sp~~~~llasggGs~D 490 (609)
+. ...+|.++.++. +.|+++-.+ .|+|||+++. +.++++.. +...+.++++++.+.++..-+. ...
T Consensus 84 ~~-fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~M------klLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s-~t~ 152 (391)
T KOG2110|consen 84 IF-FPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDM------KLLHTIETTPPNPKGLCALSPNNANCYLAYPGS-TTS 152 (391)
T ss_pred Ee-cCCceEEEEEcc--ceEEEEEcc-cEEEEecccc------eeehhhhccCCCccceEeeccCCCCceEEecCC-CCC
Confidence 22 456788888875 456666654 4999999998 66666643 4556777777776644444443 567
Q ss_pred CeEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCe-EEEEECCCCceEEEEeCC--CCCEEEEEEeCCC
Q psy4876 491 RHIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQ-LIIWKYPSLVKVAELHGH--SARVLNLAMSPDE 566 (609)
Q Consensus 491 g~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~-I~Iwd~~~~~~~~~l~~h--~~~V~~l~~spdg 566 (609)
|.|.+||+.+-+.+..+..| +.+.+++|+++|.+|++++ +.|+ |+||.+++|+++.+|+.- ...|.+++|+||+
T Consensus 153 GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATAS--eKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds 230 (391)
T KOG2110|consen 153 GDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATAS--EKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDS 230 (391)
T ss_pred ceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEec--cCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCC
Confidence 99999999999999999865 6999999999999999975 5665 899999999999999643 3468999999999
Q ss_pred CEEEEEECCCCEEEEEcCCCc
Q psy4876 567 TTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 567 ~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
++|++.|..++|.||++....
T Consensus 231 ~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 231 QFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred CeEEEecCCCeEEEEEecccc
Confidence 999999999999999998766
No 187
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=6.4e-15 Score=159.17 Aligned_cols=212 Identities=15% Similarity=0.126 Sum_probs=149.9
Q ss_pred CCCCeEEEEEccCCCEEEEEeCC---CeEEEEeCCCCee--EEEecCCCCceEEEEe--cCCEEEEE-ecCCeEEEE--E
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSL---GTVQLWDVSAKKK--CRTMDGHDVRVGALAW--NTYILSSG-SRCGNIVHH--D 403 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~d---g~I~iwd~~~~~~--~~~l~~h~~~V~~l~~--~~~~L~sg-s~dg~I~iw--d 403 (609)
+...+.+++|+|||+.|+.++.+ ..|.+||+.+++. +..+.+| ...++| +++.|+.+ +.+|.+.|| |
T Consensus 202 ~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d 278 (429)
T PRK01742 202 SSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMG 278 (429)
T ss_pred CCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEE
Confidence 66789999999999999887653 3699999988753 3334443 345788 57777665 467865555 5
Q ss_pred cCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-CCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEE
Q psy4876 404 VRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGG-NDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVL 482 (609)
Q Consensus 404 ~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs-~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ll 482 (609)
+.++ ....+..+...+....|+|||+.|+.++ .++...||++.... .....+ .+.. ..+.|+|+|..++
T Consensus 279 ~~~~--~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~-----~~~~~l-~~~~--~~~~~SpDG~~ia 348 (429)
T PRK01742 279 ANGG--TPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASG-----GGASLV-GGRG--YSAQISADGKTLV 348 (429)
T ss_pred CCCC--CeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCC-----CCeEEe-cCCC--CCccCCCCCCEEE
Confidence 5544 3455666777888999999999877665 56788888765431 112222 3333 4578999998766
Q ss_pred EEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC--CCCceEEEEeCCCCCEEEE
Q psy4876 483 ASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKY--PSLVKVAELHGHSARVLNL 560 (609)
Q Consensus 483 asggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~--~~~~~~~~l~~h~~~V~~l 560 (609)
+++ .+ .+.+||+.+++....... .....+.|+|+|+.+++++ .++.+.+|++ .++..+..+.+|.+.+..+
T Consensus 349 ~~~---~~-~i~~~Dl~~g~~~~lt~~-~~~~~~~~sPdG~~i~~~s--~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p 421 (429)
T PRK01742 349 MIN---GD-NVVKQDLTSGSTEVLSST-FLDESPSISPNGIMIIYSS--TQGLGKVLQLVSADGRFKARLPGSDGQVKFP 421 (429)
T ss_pred EEc---CC-CEEEEECCCCCeEEecCC-CCCCCceECCCCCEEEEEE--cCCCceEEEEEECCCCceEEccCCCCCCCCc
Confidence 654 24 466699998876533222 2346788999999999865 5777777765 4677888888898889999
Q ss_pred EEeCC
Q psy4876 561 AMSPD 565 (609)
Q Consensus 561 ~~spd 565 (609)
+|+|-
T Consensus 422 ~wsp~ 426 (429)
T PRK01742 422 AWSPY 426 (429)
T ss_pred ccCCC
Confidence 99984
No 188
>KOG1240|consensus
Probab=99.65 E-value=2.1e-14 Score=159.65 Aligned_cols=298 Identities=18% Similarity=0.229 Sum_probs=205.3
Q ss_pred CccccccCCccCCceeEEEEEecCCC---eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeee
Q psy4876 256 TADRILDAPEIQNDYYLNLIDWSHFN---VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDL 332 (609)
Q Consensus 256 ~p~~il~ap~~~~~~~v~~l~wsp~~---lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (609)
.|..++-|+-....-.++.++-+++. +++++.||+|++|+...-.. +.+......++
T Consensus 1035 ~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~--------------------~~~s~rS~lty 1094 (1431)
T KOG1240|consen 1035 NPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEG--------------------EGGSARSELTY 1094 (1431)
T ss_pred CccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhc--------------------CcceeeeeEEE
Confidence 34455666555555567778877754 77799999999999876110 11233344455
Q ss_pred c-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC-------eeEEEecCC--CCceEEEEe---cC-CEEEEEecCCe
Q psy4876 333 E-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK-------KKCRTMDGH--DVRVGALAW---NT-YILSSGSRCGN 398 (609)
Q Consensus 333 ~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~-------~~~~~l~~h--~~~V~~l~~---~~-~~L~sgs~dg~ 398 (609)
. ....+.++...+.|+.+|+|+.||.|++.+++.. .+.+....+ ..-|..-+| .. ..|+.+...+.
T Consensus 1095 s~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~ 1174 (1431)
T KOG1240|consen 1095 SPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSR 1174 (1431)
T ss_pred eccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccc
Confidence 4 6788999999999999999999999999998752 122222222 223334444 23 48888899999
Q ss_pred EEEEEcCCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec-CCcccEEEEEEc
Q psy4876 399 IVHHDVRSRDHKVALLQ--NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS-RHQAAVKAIAWC 475 (609)
Q Consensus 399 I~iwd~~~~~~~~~~~~--~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~-~h~~~V~~l~~s 475 (609)
|..||++... ....++ ...+.|++++.+|.+.++++|+..|.+.+||++=+ .++..+. .+..++..+..|
T Consensus 1175 iv~~D~r~~~-~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~------~~i~sw~~P~~~~i~~v~~~ 1247 (1431)
T KOG1240|consen 1175 IVSWDTRMRH-DAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFR------VPILSWEHPARAPIRHVWLC 1247 (1431)
T ss_pred eEEecchhhh-hHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecC------ceeecccCcccCCcceEEee
Confidence 9999999763 333332 33478999999999999999999999999999976 4554443 345788888888
Q ss_pred CCCC--cEEEEEeccCCCeEEEEECCCCceeEEEcCCCC--------------------eEEEEEcCCCCeEEEEEecCC
Q psy4876 476 PWSP--NVLASGGGTADRHIYFWNVSSGACLDSIDTKSQ--------------------VCALLWNSDYKELVSAHGFAQ 533 (609)
Q Consensus 476 p~~~--~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~--------------------v~sl~~s~~g~~l~~~sG~~d 533 (609)
|..+ ...++++-+..+.|.+|++.+|.+...+-.... .....+...+..+++ |+.|
T Consensus 1248 ~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~lt--ggsd 1325 (1431)
T KOG1240|consen 1248 PTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLT--GGSD 1325 (1431)
T ss_pred ccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeee--cCCc
Confidence 8655 566665423789999999999987776643311 112233333445555 5689
Q ss_pred CeEEEEECCCCce------------------------------------------------EEEE--------eCCCCCE
Q psy4876 534 NQLIIWKYPSLVK------------------------------------------------VAEL--------HGHSARV 557 (609)
Q Consensus 534 g~I~Iwd~~~~~~------------------------------------------------~~~l--------~~h~~~V 557 (609)
..|+.||....+. ...+ ..|.+.|
T Consensus 1326 ~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~I 1405 (1431)
T KOG1240|consen 1326 MKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPI 1405 (1431)
T ss_pred cceeeccCCCcccccccccCccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchh
Confidence 9999999742100 0000 1467789
Q ss_pred EEEEEeCC-CCEEEEEECCCCEEEEE
Q psy4876 558 LNLAMSPD-ETTVLSAGADETLRLWK 582 (609)
Q Consensus 558 ~~l~~spd-g~~L~s~s~Dg~I~iWd 582 (609)
+++++-.. ..+|++++.||.|+||.
T Consensus 1406 tdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1406 TDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred hhhhhhccCccEEEEecCCCeeeecC
Confidence 99887654 45899999999999994
No 189
>KOG1034|consensus
Probab=99.65 E-value=5.1e-15 Score=143.88 Aligned_cols=234 Identities=15% Similarity=0.258 Sum_probs=172.6
Q ss_pred EEEecCC----C--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccC
Q psy4876 274 LIDWSHF----N--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQE 346 (609)
Q Consensus 274 ~l~wsp~----~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spd 346 (609)
.++|+-+ + ++++|.-|.|+|.|+.+ +.+.. .+. |...|..+.+.|+
T Consensus 94 tcsw~yd~~~~~p~la~~G~~GvIrVid~~~-------------------------~~~~~--~~~ghG~sINeik~~p~ 146 (385)
T KOG1034|consen 94 TCSWSYDSNTGNPFLAAGGYLGVIRVIDVVS-------------------------GQCSK--NYRGHGGSINEIKFHPD 146 (385)
T ss_pred EEEEEecCCCCCeeEEeecceeEEEEEecch-------------------------hhhcc--ceeccCccchhhhcCCC
Confidence 4677653 2 55677889999999987 44322 333 8999999999998
Q ss_pred C-CEEEEEeCCCeEEEEeCCCCeeEEEec---CCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCe-----e-----
Q psy4876 347 G-YMLGVGTSLGTVQLWDVSAKKKCRTMD---GHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDH-----K----- 410 (609)
Q Consensus 347 g-~~Lasgs~dg~I~iwd~~~~~~~~~l~---~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~-----~----- 410 (609)
. ++|++++.|..|++|++++..++..+. +|...|.++.| ++.+|++++.|.+|++|++...+- .
T Consensus 147 ~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~ 226 (385)
T KOG1034|consen 147 RPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYS 226 (385)
T ss_pred CCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccC
Confidence 6 899999999999999999999998875 69999999999 578999999999999999983210 0
Q ss_pred -----------------EEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCC-CCC-------CCCccceEeecCC
Q psy4876 411 -----------------VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVP-GQH-------TFSTQPIHSLSRH 465 (609)
Q Consensus 411 -----------------~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~-~~~-------~~~~~~~~~~~~h 465 (609)
..+-..|...|-|+.|- |+++++-+-++.|..|.... .+. ......+..+.-.
T Consensus 227 ~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~ 304 (385)
T KOG1034|consen 227 PNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYP 304 (385)
T ss_pred CCCccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccC
Confidence 00223467777777776 57899988899999998722 111 0011223344434
Q ss_pred cccEEE--EEEcCCCCcEEEEEeccCCCeEEEEECCCCcee--EEEc---CCCCeEEEEEcCCCCeEEEEEecCCCeEEE
Q psy4876 466 QAAVKA--IAWCPWSPNVLASGGGTADRHIYFWNVSSGACL--DSID---TKSQVCALLWNSDYKELVSAHGFAQNQLII 538 (609)
Q Consensus 466 ~~~V~~--l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~--~~~~---~~~~v~sl~~s~~g~~l~~~sG~~dg~I~I 538 (609)
...|.- .+|.|.++ +||.|+ ..|.|++||++..+.. .++. ....|...+|+.|+..|+..+ +|+.|.-
T Consensus 305 ~c~iWfirf~~d~~~~-~la~gn--q~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vc--dd~~Vwr 379 (385)
T KOG1034|consen 305 MCDIWFIRFAFDPWQK-MLALGN--QSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVC--DDGTVWR 379 (385)
T ss_pred ccceEEEEEeecHHHH-HHhhcc--CCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEe--CCCcEEE
Confidence 444444 45667664 566653 8999999999976652 2222 235799999999999999976 8999999
Q ss_pred EEC
Q psy4876 539 WKY 541 (609)
Q Consensus 539 wd~ 541 (609)
||.
T Consensus 380 wdr 382 (385)
T KOG1034|consen 380 WDR 382 (385)
T ss_pred EEe
Confidence 985
No 190
>KOG4227|consensus
Probab=99.64 E-value=1.9e-14 Score=142.28 Aligned_cols=246 Identities=14% Similarity=0.231 Sum_probs=181.8
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC------CeeEEEecC-CCCceEEEEec--CCEEEEEecCCeEEEEEc
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSA------KKKCRTMDG-HDVRVGALAWN--TYILSSGSRCGNIVHHDV 404 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~------~~~~~~l~~-h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~ 404 (609)
|.+.|.++.|+.++++||+|+.|..++||+++. .+.+..+.. |...|.|++|+ ...|++|+.+|+|..+|+
T Consensus 55 H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDi 134 (609)
T KOG4227|consen 55 HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDI 134 (609)
T ss_pred hccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeec
Confidence 899999999999999999999999999999863 355555544 55899999995 578999999999999999
Q ss_pred CCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEE
Q psy4876 405 RSRDHKVALLQ--NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVL 482 (609)
Q Consensus 405 ~~~~~~~~~~~--~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ll 482 (609)
.+.+ .+..+. ...+.|..+..+|-.+.|++.+.++.|.+||.+..... .....+.........+.|+|..+.||
T Consensus 135 Et~q-si~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~---~~~~~~AN~~~~F~t~~F~P~~P~Li 210 (609)
T KOG4227|consen 135 ETKQ-SIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNP---ISLVLPANSGKNFYTAEFHPETPALI 210 (609)
T ss_pred ccce-eeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCC---CceeeecCCCccceeeeecCCCceeE
Confidence 9874 444433 22358999999999899999999999999999876321 11222333456678899999999999
Q ss_pred EEEeccCCCeEEEEECCCCce-eEEE------cC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCC
Q psy4876 483 ASGGGTADRHIYFWNVSSGAC-LDSI------DT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHS 554 (609)
Q Consensus 483 asggGs~Dg~I~iwd~~t~~~-~~~~------~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~ 554 (609)
++.. ..+-+-+||++.... +... .. .....++.|+|.|..+++.- ....-.+||+-+..+...-..|.
T Consensus 211 ~~~~--~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiR--R~~~P~~~D~~S~R~~V~k~D~N 286 (609)
T KOG4227|consen 211 LVNS--ETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIR--RGKCPLYFDFISQRCFVLKSDHN 286 (609)
T ss_pred Eecc--ccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhh--ccCCCEEeeeecccceeEeccCC
Confidence 9874 778899999985432 1111 11 12346789999999988753 33344567776543322212232
Q ss_pred -------CCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 555 -------ARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 555 -------~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
..+.+++|.-|- .+++|+.+-.|.+|.+-....
T Consensus 287 ~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~d 326 (609)
T KOG4227|consen 287 PNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRAND 326 (609)
T ss_pred CCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCcc
Confidence 346778887655 499999999999999865443
No 191
>KOG2139|consensus
Probab=99.64 E-value=1.2e-13 Score=135.97 Aligned_cols=277 Identities=17% Similarity=0.270 Sum_probs=182.9
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccC
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQE 346 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spd 346 (609)
...+..++|++.- ++.++.|..|++||-.. .....+.. .....|+|++|-|.
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-------------------------t~pt~Lks-~sQrnvtclawRPl 151 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-------------------------TCPTKLKS-VSQRNVTCLAWRPL 151 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCC-------------------------CCCceecc-hhhcceeEEEeccC
Confidence 3457889999962 66688899999999765 22222222 24578999999997
Q ss_pred C-CEEEEEeCCCeEEEEeCCCC----eeE----------EEecCCCCceEEEEe--cCCEEEEEec-CCeEEEEEcCCCC
Q psy4876 347 G-YMLGVGTSLGTVQLWDVSAK----KKC----------RTMDGHDVRVGALAW--NTYILSSGSR-CGNIVHHDVRSRD 408 (609)
Q Consensus 347 g-~~Lasgs~dg~I~iwd~~~~----~~~----------~~l~~h~~~V~~l~~--~~~~L~sgs~-dg~I~iwd~~~~~ 408 (609)
+ .-|++|+..| |.||..... ..+ ....+| ..|+++.| +|..+++++- |..|.|||.+++.
T Consensus 152 saselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~ 229 (445)
T KOG2139|consen 152 SASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQ 229 (445)
T ss_pred Ccceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCC
Confidence 6 7888898855 999987532 111 122334 68999999 5778887774 6789999999874
Q ss_pred eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 409 HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 409 ~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs 488 (609)
.+......-+.+.-+.|||||.+|+.++-|+..++|+.... .......-..+.|...+|+|.|..||.+..
T Consensus 230 -~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~------wt~erw~lgsgrvqtacWspcGsfLLf~~s-- 300 (445)
T KOG2139|consen 230 -KIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQS------WTKERWILGSGRVQTACWSPCGSFLLFACS-- 300 (445)
T ss_pred -cccccccCCCceeeEEEcCCCCEEEEecccceeeeehhccc------ceecceeccCCceeeeeecCCCCEEEEEEc--
Confidence 33333334567888999999999999999999999976544 112222234558999999999999998864
Q ss_pred CCCeEEEEECCC----Cc-----------eeEEE------cC----CCCeEEEEEcCCCCeEEEEEecCC------CeEE
Q psy4876 489 ADRHIYFWNVSS----GA-----------CLDSI------DT----KSQVCALLWNSDYKELVSAHGFAQ------NQLI 537 (609)
Q Consensus 489 ~Dg~I~iwd~~t----~~-----------~~~~~------~~----~~~v~sl~~s~~g~~l~~~sG~~d------g~I~ 537 (609)
+.-++|.+.- +. .+..+ .. .+.+.+++|.|.|.+|++..-..+ ..|.
T Consensus 301 --gsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~ 378 (445)
T KOG2139|consen 301 --GSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHIS 378 (445)
T ss_pred --CCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhh
Confidence 3333333321 10 00011 11 356889999999999998642222 2366
Q ss_pred EEECCCCceEEEE-eCC--CCCEEEEEEeC---CCCEEEEEECCCCEEEEEcC
Q psy4876 538 IWKYPSLVKVAEL-HGH--SARVLNLAMSP---DETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 538 Iwd~~~~~~~~~l-~~h--~~~V~~l~~sp---dg~~L~s~s~Dg~I~iWdl~ 584 (609)
+||....-.+.-. .+. ...-..|+|+| +|.+|..+=.-|.+.-|++.
T Consensus 379 ~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~ 431 (445)
T KOG2139|consen 379 RFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPLT 431 (445)
T ss_pred hhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence 6776544333222 111 12245567776 56777777777888777654
No 192
>KOG0642|consensus
Probab=99.63 E-value=4e-15 Score=153.82 Aligned_cols=256 Identities=16% Similarity=0.178 Sum_probs=181.5
Q ss_pred ceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEcc
Q psy4876 269 DYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQ 345 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~sp 345 (609)
...+..+++++.. +++++.||.|.+|+++..... ....++++.++. |.++|.|++..+
T Consensus 294 ~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s-------------------~~~~~epi~tfraH~gPVl~v~v~~ 354 (577)
T KOG0642|consen 294 DDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKS-------------------AEKDVEPILTFRAHEGPVLCVVVPS 354 (577)
T ss_pred hhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCc-------------------cccceeeeEEEecccCceEEEEecC
Confidence 3457778888763 888999999999999441111 116788999999 999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----------eeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEE
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAK----------KKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVAL 413 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~----------~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~ 413 (609)
++..+++|+.||+|+.|++... .....+.||.+.|+.++++ ...|++++.||+++.|+......+...
T Consensus 355 n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~ 434 (577)
T KOG0642|consen 355 NGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFG 434 (577)
T ss_pred CceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccC
Confidence 9999999999999999965411 2456788999999999995 578999999999999998875431111
Q ss_pred EccCCCCeEEEEEccCC-CEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC-------CcccEEEEEEcCCCCcEEEEE
Q psy4876 414 LQNHTQEVCGLKWSPDG-RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR-------HQAAVKAIAWCPWSPNVLASG 485 (609)
Q Consensus 414 ~~~h~~~V~~l~~spdg-~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~-------h~~~V~~l~~sp~~~~llasg 485 (609)
.....+.-.++.+-... .+.++...-+.--+++.... ..+..+.. ....+..+.++|..+ +.+++
T Consensus 435 ~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~------s~~~~~~s~~~~~~~~~~~in~vVs~~~~~-~~~~~ 507 (577)
T KOG0642|consen 435 EPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVV------SDLLIFESSASPGPRRYPQINKVVSHPTAD-ITFTA 507 (577)
T ss_pred CccccCCcceEeeccchhHhhhhhcccccccchhhhhh------hheeeccccCCCcccccCccceEEecCCCC-eeEec
Confidence 11122233445553322 12222222222233333332 12222211 123467888999885 55554
Q ss_pred eccCCCeEEEEECCCCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCC
Q psy4876 486 GGTADRHIYFWNVSSGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHS 554 (609)
Q Consensus 486 gGs~Dg~I~iwd~~t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~ 554 (609)
. .|+.|+++|..+++.+.....+ ..++++++.|+|.+|++ |..|+.+++|.+....++.....|.
T Consensus 508 h--ed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s--~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 508 H--EDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMS--GSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred c--cCCceecccccccccchheeeccceecceeecCCCceEEe--ecCCceeehhhccchheeecccccc
Confidence 3 8999999999999999877655 58999999999999999 6699999999998877777666654
No 193
>KOG0649|consensus
Probab=99.63 E-value=3.9e-13 Score=125.90 Aligned_cols=271 Identities=15% Similarity=0.166 Sum_probs=180.8
Q ss_pred EEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEE
Q psy4876 274 LIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYML 350 (609)
Q Consensus 274 ~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~L 350 (609)
.-+|+|.+ ++++..+|.|.+..+..... ......++. .+.... |+++|..++|. ..+|
T Consensus 15 ~qa~sp~~~~l~agn~~G~iav~sl~sl~s----------------~sa~~~gk~-~iv~eqahdgpiy~~~f~--d~~L 75 (325)
T KOG0649|consen 15 AQAISPSKQYLFAGNLFGDIAVLSLKSLDS----------------GSAEPPGKL-KIVPEQAHDGPIYYLAFH--DDFL 75 (325)
T ss_pred HHhhCCcceEEEEecCCCeEEEEEehhhhc----------------cccCCCCCc-ceeeccccCCCeeeeeee--hhhe
Confidence 34677764 67788899999999876211 001111332 233334 99999999998 3466
Q ss_pred EEEeCCCeEEEEeCCCCee------EE--EecCCC-----CceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEc
Q psy4876 351 GVGTSLGTVQLWDVSAKKK------CR--TMDGHD-----VRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQ 415 (609)
Q Consensus 351 asgs~dg~I~iwd~~~~~~------~~--~l~~h~-----~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~ 415 (609)
++|+. |.|+-|....... +- ....|. ..|.++..+ .+-++.++.|+.++-||++++ .....++
T Consensus 76 ls~gd-G~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G-~i~r~~r 153 (325)
T KOG0649|consen 76 LSGGD-GLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDG-RIQREYR 153 (325)
T ss_pred eeccC-ceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCC-EEEEEEc
Confidence 66654 9999987653211 10 111122 346666664 344555558999999999998 5888999
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec---------CC-cccEEEEEEcCCCCcEEEEE
Q psy4876 416 NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS---------RH-QAAVKAIAWCPWSPNVLASG 485 (609)
Q Consensus 416 ~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~---------~h-~~~V~~l~~sp~~~~llasg 485 (609)
+|++.|.+++--.....+++|++||+++|||.++++ .+..+. .| ...|.+++-+. ..+++|
T Consensus 154 GHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k------~v~~ie~yk~~~~lRp~~g~wigala~~e---dWlvCG 224 (325)
T KOG0649|consen 154 GHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQK------HVSMIEPYKNPNLLRPDWGKWIGALAVNE---DWLVCG 224 (325)
T ss_pred CCcceeeeeeecccCcceeecCCCccEEEEeccccc------eeEEeccccChhhcCcccCceeEEEeccC---ceEEec
Confidence 999999999985555579999999999999999984 333332 22 23566776644 356666
Q ss_pred eccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCC
Q psy4876 486 GGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPD 565 (609)
Q Consensus 486 gGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spd 565 (609)
+ ...+.+|+++..++...+.....+..+.|..+ .+++ ++..+.|.-|.+. |.....+.......+...|+-.
T Consensus 225 g---Gp~lslwhLrsse~t~vfpipa~v~~v~F~~d--~vl~--~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~s~~~~ 296 (325)
T KOG0649|consen 225 G---GPKLSLWHLRSSESTCVFPIPARVHLVDFVDD--CVLI--GGEGNHVQSYTLN-GVLQANIPVESTACYSASWQTS 296 (325)
T ss_pred C---CCceeEEeccCCCceEEEecccceeEeeeecc--eEEE--eccccceeeeeec-cEEEEeccCCccceeeecccCC
Confidence 4 68899999999999999999999999988665 3444 3367788888864 3333344443344555555443
Q ss_pred C-CEEEEEECCCCEEEEE
Q psy4876 566 E-TTVLSAGADETLRLWK 582 (609)
Q Consensus 566 g-~~L~s~s~Dg~I~iWd 582 (609)
- ++|-.++..+.+.|+.
T Consensus 297 p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 297 PIKFISIAGFSNKLHILK 314 (325)
T ss_pred ceEEEEecccceeeeeee
Confidence 3 3455566666676654
No 194
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=2.2e-13 Score=147.08 Aligned_cols=220 Identities=14% Similarity=0.103 Sum_probs=150.1
Q ss_pred CCCCeEEEEEccCCCEEEEEeC---CCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEE-ecCC--eEEEEEcC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTS---LGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSG-SRCG--NIVHHDVR 405 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~---dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sg-s~dg--~I~iwd~~ 405 (609)
+...+.+.+|+|||+.||..+. +..|.+|++.+++... +......+..+.| ++..|+.. +.+| .|++||+.
T Consensus 197 ~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~ 275 (429)
T PRK03629 197 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 275 (429)
T ss_pred CCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECC
Confidence 5678999999999998887542 3579999998875433 2223333456778 57666644 4455 58899998
Q ss_pred CCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-C--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEE
Q psy4876 406 SRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND-N--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVL 482 (609)
Q Consensus 406 ~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~D-g--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ll 482 (609)
++. ...+..+...+....|+|||+.|+..+.+ + .|+++|+.++ ....+..+........|+|+|..++
T Consensus 276 tg~--~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g-------~~~~lt~~~~~~~~~~~SpDG~~Ia 346 (429)
T PRK03629 276 SGQ--IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGG-------APQRITWEGSQNQDADVSSDGKFMV 346 (429)
T ss_pred CCC--EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCC-------CeEEeecCCCCccCEEECCCCCEEE
Confidence 763 34444455677889999999998877764 3 4555577655 2233333444566789999998877
Q ss_pred EEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecC-CCeEEEEECCCCceEEEEeCCCCCEEEEE
Q psy4876 483 ASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFA-QNQLIIWKYPSLVKVAELHGHSARVLNLA 561 (609)
Q Consensus 483 asggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~-dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~ 561 (609)
+++.......|.+||+.+++.. .+..........|+|||+.++.++... ...+.++++ ++.....+.+|.+.+...+
T Consensus 347 ~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~ 424 (429)
T PRK03629 347 MVSSNGGQQHIAKQDLATGGVQ-VLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPA 424 (429)
T ss_pred EEEccCCCceEEEEECCCCCeE-EeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCcc
Confidence 7653222356899999888644 333333445788999999999876311 123777787 4555667778888899999
Q ss_pred EeCC
Q psy4876 562 MSPD 565 (609)
Q Consensus 562 ~spd 565 (609)
|+|-
T Consensus 425 Wsp~ 428 (429)
T PRK03629 425 WSPY 428 (429)
T ss_pred cCCC
Confidence 9873
No 195
>KOG1310|consensus
Probab=99.62 E-value=6e-15 Score=151.50 Aligned_cols=217 Identities=18% Similarity=0.273 Sum_probs=166.9
Q ss_pred eeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEe-cCCCCceEEEEe----cCCEEEEEecCCeEEEE
Q psy4876 329 LMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTM-DGHDVRVGALAW----NTYILSSGSRCGNIVHH 402 (609)
Q Consensus 329 l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l-~~h~~~V~~l~~----~~~~L~sgs~dg~I~iw 402 (609)
-.++. |.+.|.|++|+.+|.+|++|+.|-.+.|||.-..+.+..+ .+|...|.++.| +..++++|..|..|+++
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf 122 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF 122 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence 34556 9999999999999999999999999999999888877766 489999999999 57899999999999999
Q ss_pred EcCC---------CCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCcEEEEeCCCCCCCCCcc----ceEeecCCccc
Q psy4876 403 DVRS---------RDHKVALLQNHTQEVCGLKWSPDG-RYLASGGNDNLLNIWSGVPGQHTFSTQ----PIHSLSRHQAA 468 (609)
Q Consensus 403 d~~~---------~~~~~~~~~~h~~~V~~l~~spdg-~~lasgs~Dg~I~iwd~~~~~~~~~~~----~~~~~~~h~~~ 468 (609)
|+.. .......+..|...|..|+..|++ ..|.++++||+|+-+|++......... .+..+....-.
T Consensus 123 dl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lie 202 (758)
T KOG1310|consen 123 DLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIE 202 (758)
T ss_pred ecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhhe
Confidence 9985 223445567899999999999988 789999999999999999753211111 11112222345
Q ss_pred EEEEEEcCCCCcEEEEEeccCCCeEEEEECCC--------Cc----------eeEEEcCC-------------CCeEEEE
Q psy4876 469 VKAIAWCPWSPNVLASGGGTADRHIYFWNVSS--------GA----------CLDSIDTK-------------SQVCALL 517 (609)
Q Consensus 469 V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t--------~~----------~~~~~~~~-------------~~v~sl~ 517 (609)
.+++..+|..+++|++|| .|-..++||.+. +. |+..+... ..++-+.
T Consensus 203 lk~ltisp~rp~~laVGg--sdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vt 280 (758)
T KOG1310|consen 203 LKCLTISPSRPYYLAVGG--SDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVT 280 (758)
T ss_pred eeeeeecCCCCceEEecC--CCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEE
Confidence 689999999999999986 899999999431 11 23322110 1256789
Q ss_pred EcCCCCeEEEEEecCCCeEEEEECCCCceEEE
Q psy4876 518 WNSDYKELVSAHGFAQNQLIIWKYPSLVKVAE 549 (609)
Q Consensus 518 ~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~ 549 (609)
|+|+|.+|++.- ....|++||+..++....
T Consensus 281 fnpNGtElLvs~--~gEhVYlfdvn~~~~~~~ 310 (758)
T KOG1310|consen 281 FNPNGTELLVSW--GGEHVYLFDVNEDKSPTP 310 (758)
T ss_pred ECCCCcEEEEee--CCeEEEEEeecCCCCcee
Confidence 999999999854 467899999987765443
No 196
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.62 E-value=5.8e-13 Score=139.08 Aligned_cols=239 Identities=11% Similarity=0.062 Sum_probs=158.2
Q ss_pred EEEEecCCC-eE-EEE-cCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCE
Q psy4876 273 NLIDWSHFN-VL-AVA-LGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYM 349 (609)
Q Consensus 273 ~~l~wsp~~-ll-a~s-~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~ 349 (609)
..++++|++ .| +++ .++.|.+|++... +.+..+......+....++|+|+|++
T Consensus 38 ~~l~~spd~~~lyv~~~~~~~i~~~~~~~~------------------------g~l~~~~~~~~~~~p~~i~~~~~g~~ 93 (330)
T PRK11028 38 QPMVISPDKRHLYVGVRPEFRVLSYRIADD------------------------GALTFAAESPLPGSPTHISTDHQGRF 93 (330)
T ss_pred ccEEECCCCCEEEEEECCCCcEEEEEECCC------------------------CceEEeeeecCCCCceEEEECCCCCE
Confidence 357889986 33 333 4689999998631 44444444433446788999999998
Q ss_pred EEEEeC-CCeEEEEeCCCC----eeEEEecCCCCceEEEEe--cCCEEE-EEecCCeEEEEEcCCCCeeE------EEEc
Q psy4876 350 LGVGTS-LGTVQLWDVSAK----KKCRTMDGHDVRVGALAW--NTYILS-SGSRCGNIVHHDVRSRDHKV------ALLQ 415 (609)
Q Consensus 350 Lasgs~-dg~I~iwd~~~~----~~~~~l~~h~~~V~~l~~--~~~~L~-sgs~dg~I~iwd~~~~~~~~------~~~~ 415 (609)
|++++. ++.|.+|++++. +.+..+. +.....++++ ++++++ +...++.|.+||+.+..... ....
T Consensus 94 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~ 172 (330)
T PRK11028 94 LFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV 172 (330)
T ss_pred EEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC
Confidence 888764 789999999743 2233333 2234555667 456665 45567999999998643211 1111
Q ss_pred cCCCCeEEEEEccCCCEEEEEeC-CCcEEEEeCCCCCCCCCccceEeecC------CcccEEEEEEcCCCCcEEEEEecc
Q psy4876 416 NHTQEVCGLKWSPDGRYLASGGN-DNLLNIWSGVPGQHTFSTQPIHSLSR------HQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 416 ~h~~~V~~l~~spdg~~lasgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~------h~~~V~~l~~sp~~~~llasggGs 488 (609)
.......++|+|+|++++++.. ++.|.+||+...... .+.+..+.. +......+.++|+++.++++. .
T Consensus 173 -~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~--~ 247 (330)
T PRK11028 173 -EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGE--IECVQTLDMMPADFSDTRWAADIHITPDGRHLYACD--R 247 (330)
T ss_pred -CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCC--EEEEEEEecCCCcCCCCccceeEEECCCCCEEEEec--C
Confidence 2344678999999999988876 899999999742110 122333221 112334688999998777764 3
Q ss_pred CCCeEEEEECCCCc----eeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 489 ADRHIYFWNVSSGA----CLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~----~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
.++.|.+|++.... .+..+........+.++++|++|+++. ..++.|.+|++.
T Consensus 248 ~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~-~~~~~v~v~~~~ 304 (330)
T PRK11028 248 TASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAG-QKSHHISVYEID 304 (330)
T ss_pred CCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEE-ccCCcEEEEEEc
Confidence 58899999996433 233334444567899999999999975 358999999874
No 197
>KOG2111|consensus
Probab=99.62 E-value=4.7e-13 Score=130.02 Aligned_cols=241 Identities=15% Similarity=0.230 Sum_probs=169.5
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCC--CceEEEEecCCEEE-EEecC------CeEEEEEcCCC
Q psy4876 337 NVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHD--VRVGALAWNTYILS-SGSRC------GNIVHHDVRSR 407 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~--~~V~~l~~~~~~L~-sgs~d------g~I~iwd~~~~ 407 (609)
...+++|+.|...+++|..+| .+||+++--+....-+.+. -.+..+-|..++|+ .|+.+ ..|.|||-..
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k- 84 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLK- 84 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEeccc-
Confidence 345699999999999999988 9999987533322222222 23333444445444 44333 4699999443
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCc-EEEEEe
Q psy4876 408 DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPN-VLASGG 486 (609)
Q Consensus 408 ~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~-llasgg 486 (609)
+.++..+. ...+|.++.+.++ .|++.- .+.|+||...+. .+.++.+.....+---++.+|.... +||.-
T Consensus 85 ~~~i~el~-f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n-----~k~l~~~et~~NPkGlC~~~~~~~k~~LafP- 154 (346)
T KOG2111|consen 85 ERCIIELS-FNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDN-----PKLLHVIETRSNPKGLCSLCPTSNKSLLAFP- 154 (346)
T ss_pred CcEEEEEE-eccceeeEEEcCC--eEEEEe-cCeEEEEEcCCC-----hhheeeeecccCCCceEeecCCCCceEEEcC-
Confidence 34555554 6788999999875 465554 578999998743 1455555433322223445554443 44443
Q ss_pred ccCCCeEEEEECCCCce--eEEE-cCCCCeEEEEEcCCCCeEEEEEecCCCe-EEEEECCCCceEEEEeC--CCCCEEEE
Q psy4876 487 GTADRHIYFWNVSSGAC--LDSI-DTKSQVCALLWNSDYKELVSAHGFAQNQ-LIIWKYPSLVKVAELHG--HSARVLNL 560 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t~~~--~~~~-~~~~~v~sl~~s~~g~~l~~~sG~~dg~-I~Iwd~~~~~~~~~l~~--h~~~V~~l 560 (609)
|..-|.|+|-|+...+. ...+ .+.+.|.+++.+.+|..+++++ ..|+ |+|||..+++++.+++. ....|.+|
T Consensus 155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaS--tkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~i 232 (346)
T KOG2111|consen 155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATAS--TKGTLIRIFDTEDGTLLQELRRGVDRADIYCI 232 (346)
T ss_pred CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEec--cCcEEEEEEEcCCCcEeeeeecCCchheEEEE
Confidence 46789999999986555 2344 4567999999999999999965 5665 89999999999999964 23569999
Q ss_pred EEeCCCCEEEEEECCCCEEEEEcCCCccchh
Q psy4876 561 AMSPDETTVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 561 ~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
+||||..+|+++|.-|+|.||.+......++
T Consensus 233 aFSp~~s~LavsSdKgTlHiF~l~~~~~~~~ 263 (346)
T KOG2111|consen 233 AFSPNSSWLAVSSDKGTLHIFSLRDTENTED 263 (346)
T ss_pred EeCCCccEEEEEcCCCeEEEEEeecCCCCcc
Confidence 9999999999999999999999998665444
No 198
>KOG0771|consensus
Probab=99.61 E-value=1.1e-13 Score=139.07 Aligned_cols=199 Identities=20% Similarity=0.241 Sum_probs=152.7
Q ss_pred EEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccc
Q psy4876 381 GALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQP 458 (609)
Q Consensus 381 ~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~ 458 (609)
.+++| ++..|++|+.||.+++|+..... .+.....|..+|.++.|+|||+.|++-+.| ..+||+.+++ ..
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~-t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g------~~ 219 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML-TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTG------AA 219 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcch-hhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccC------ch
Confidence 45666 67899999999999999987753 566677899999999999999999999999 8999999998 33
Q ss_pred eEeec--CCcccEEEEEEcCCC--CcEEEEEeccCCCeEEEEECCCCce------eEEEcCCCCeEEEEEcCCCCeEEEE
Q psy4876 459 IHSLS--RHQAAVKAIAWCPWS--PNVLASGGGTADRHIYFWNVSSGAC------LDSIDTKSQVCALLWNSDYKELVSA 528 (609)
Q Consensus 459 ~~~~~--~h~~~V~~l~~sp~~--~~llasggGs~Dg~I~iwd~~t~~~------~~~~~~~~~v~sl~~s~~g~~l~~~ 528 (609)
+.... .....+..+.|..++ ..+++.+.-...+.|+.||+....- .+.+..+..|.+++.+.+|++++.
T Consensus 220 ~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~Al- 298 (398)
T KOG0771|consen 220 LARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLAL- 298 (398)
T ss_pred hhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEE-
Confidence 33332 222345566676654 2333322223556677777653221 122234558999999999999999
Q ss_pred EecCCCeEEEEECCCCceEEEE-eCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccc
Q psy4876 529 HGFAQNQLIIWKYPSLVKVAEL-HGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 529 sG~~dg~I~Iwd~~~~~~~~~l-~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
|+.+|.|-|++..+.+.+... +.|...|+.+.|+||.+++++.+.|..+.|..+......
T Consensus 299 -GT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd~~~ 359 (398)
T KOG0771|consen 299 -GTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVDKTM 359 (398)
T ss_pred -eccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEeecccc
Confidence 568999999999999888766 579999999999999999999999999999998774433
No 199
>KOG1009|consensus
Probab=99.61 E-value=4.8e-14 Score=140.69 Aligned_cols=245 Identities=21% Similarity=0.343 Sum_probs=178.0
Q ss_pred CCCCeEEEEEccCCC-EEEEEeCCCeEEEEeCCCC---------eeEEEecCCCCceEEEEec--CCEEEEEecCCeEEE
Q psy4876 334 GNENVCSVAWIQEGY-MLGVGTSLGTVQLWDVSAK---------KKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVH 401 (609)
Q Consensus 334 h~~~V~~v~~spdg~-~Lasgs~dg~I~iwd~~~~---------~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~i 401 (609)
...+|.++.|.+++. .||+|+.|..|+||-+..+ +.+..+..|...|+++.|+ |.+|++|+.+|.|.+
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l 91 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL 91 (434)
T ss_pred CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence 357899999999875 9999999999999988643 2345678899999999995 679999999999999
Q ss_pred EEcC--------C-----C--CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCc
Q psy4876 402 HDVR--------S-----R--DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ 466 (609)
Q Consensus 402 wd~~--------~-----~--~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~ 466 (609)
|... + . ......+.+|...|..++|+|++.++++++.|+.+++||+..| .....+.+|.
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G------~l~~~~~dh~ 165 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAG------QLLAILDDHE 165 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccc------eeEeeccccc
Confidence 9765 2 1 1234567789999999999999999999999999999999999 7888899999
Q ss_pred ccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc--------------------C----CCCeEEEEEcCCC
Q psy4876 467 AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID--------------------T----KSQVCALLWNSDY 522 (609)
Q Consensus 467 ~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~--------------------~----~~~v~sl~~s~~g 522 (609)
..|..++|.|-+.++..-+ .|+..+.+.+.....+..+. + .+-...++|+|+|
T Consensus 166 ~yvqgvawDpl~qyv~s~s---~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG 242 (434)
T KOG1009|consen 166 HYVQGVAWDPLNQYVASKS---SDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDG 242 (434)
T ss_pred cccceeecchhhhhhhhhc---cCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCC
Confidence 9999999999886554433 57777776665433222111 1 1134568999999
Q ss_pred CeEEEEEecC-------CCeEEEEECCC-CceEEEEeCCCCCEEEEEEeC------------------CCCEEEEEECCC
Q psy4876 523 KELVSAHGFA-------QNQLIIWKYPS-LVKVAELHGHSARVLNLAMSP------------------DETTVLSAGADE 576 (609)
Q Consensus 523 ~~l~~~sG~~-------dg~I~Iwd~~~-~~~~~~l~~h~~~V~~l~~sp------------------dg~~L~s~s~Dg 576 (609)
.++++..|.- -+..++|+-.. ..+...+.+-...+..+.|+| -+-.++.+ ...
T Consensus 243 ~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiA-t~~ 321 (434)
T KOG1009|consen 243 SLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIA-TKN 321 (434)
T ss_pred cEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEe-ecc
Confidence 9998754311 23345555332 234445555555556666554 12234444 456
Q ss_pred CEEEEEcCCCcc
Q psy4876 577 TLRLWKIFEKVK 588 (609)
Q Consensus 577 ~I~iWdl~~~~~ 588 (609)
.|.|||.+...+
T Consensus 322 svyvydtq~~~P 333 (434)
T KOG1009|consen 322 SVYVYDTQTLEP 333 (434)
T ss_pred eEEEeccccccc
Confidence 899999887544
No 200
>KOG1334|consensus
Probab=99.60 E-value=1e-14 Score=148.30 Aligned_cols=289 Identities=16% Similarity=0.221 Sum_probs=215.6
Q ss_pred eeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 270 YYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
-.|+.|.|+..| +++++.|..|.+||+.. +....-..-.|...|..-.|.|..
T Consensus 143 GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~-------------------------~~~~l~f~SGH~~NvfQaKFiP~s 197 (559)
T KOG1334|consen 143 GCVNTVHFNQRGDVLASGSDDLQVVVWDWVS-------------------------GSPKLSFESGHCNNVFQAKFIPFS 197 (559)
T ss_pred CccceeeecccCceeeccCccceEEeehhhc-------------------------cCcccccccccccchhhhhccCCC
Confidence 468889999876 55688889999999987 444333333388888888898853
Q ss_pred --CEEEEEeCCCeEEEEeCCCCe-e--EEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCe--eEEEEccC
Q psy4876 348 --YMLGVGTSLGTVQLWDVSAKK-K--CRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDH--KVALLQNH 417 (609)
Q Consensus 348 --~~Lasgs~dg~I~iwd~~~~~-~--~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~--~~~~~~~h 417 (609)
.-|++++.||.|++=.+.... + ...+..|.++|..++. +++.|.+++.|+.+..+|++.... ....-..+
T Consensus 198 ~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~ 277 (559)
T KOG1334|consen 198 GDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREAD 277 (559)
T ss_pred CCcCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccC
Confidence 789999999999987764332 2 3445669999998888 578999999999999999987642 12222333
Q ss_pred CC---CeEEEEEccCCC-EEEEEeCCCcEEEEeCCCCCCCCCccceEeec------CCcccEEEEEEcCCCCcEEEEEec
Q psy4876 418 TQ---EVCGLKWSPDGR-YLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS------RHQAAVKAIAWCPWSPNVLASGGG 487 (609)
Q Consensus 418 ~~---~V~~l~~spdg~-~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~------~h~~~V~~l~~sp~~~~llasggG 487 (609)
.. ....++..|... ++++|+.|-.+++||.+.-........+..+. .....|++++|+.++..++++-
T Consensus 278 ~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSY-- 355 (559)
T KOG1334|consen 278 EKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASY-- 355 (559)
T ss_pred CccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeee--
Confidence 33 577889999544 89999999999999988654322222223332 2345689999998888899985
Q ss_pred cCCCeEEEEECCCCc------------eeEE-EcCC---CCeEEEE-EcCCCCeEEEEEecCCCeEEEEECCCCceEEEE
Q psy4876 488 TADRHIYFWNVSSGA------------CLDS-IDTK---SQVCALL-WNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL 550 (609)
Q Consensus 488 s~Dg~I~iwd~~t~~------------~~~~-~~~~---~~v~sl~-~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l 550 (609)
.|-.|+++.-..+. .+.. +++| ..|..+- |-|...++++ |++-|.|.||+-.+++.+..+
T Consensus 356 -nDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvS--GSDCGhIFiW~K~t~eii~~M 432 (559)
T KOG1334|consen 356 -NDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVS--GSDCGHIFIWDKKTGEIIRFM 432 (559)
T ss_pred -cccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEe--cCccceEEEEecchhHHHHHh
Confidence 69999999544221 1111 3333 2466665 4577788877 779999999999999999888
Q ss_pred eCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 551 HGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 551 ~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
.+....|+||.=+|--.+||+.|-|..|+||.-.+.+.
T Consensus 433 egDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er 470 (559)
T KOG1334|consen 433 EGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAER 470 (559)
T ss_pred hcccceEeccCCCCCCchhhccCCccceeeecCCcccc
Confidence 88777999999999999999999999999999855443
No 201
>KOG1523|consensus
Probab=99.60 E-value=1.3e-13 Score=133.97 Aligned_cols=234 Identities=17% Similarity=0.264 Sum_probs=176.9
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC---eeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAK---KKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRD 408 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~---~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~ 408 (609)
..++|+|.+|++|+..+|++..+..|.||..... +..+++..|...|+.++|. .+.|++++.|..-++|....+.
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~ 88 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG 88 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence 3578999999999999999999999999988765 4678899999999999995 5789999999999999985443
Q ss_pred --eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEe
Q psy4876 409 --HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG 486 (609)
Q Consensus 409 --~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg 486 (609)
.+...+..+...++++.|+|.++.||+|+....|.||-.+..+.-+..+ +.-..+...|.+++|+|++ -++++|
T Consensus 89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsK--hikkPirStv~sldWhpnn-VLlaaG- 164 (361)
T KOG1523|consen 89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSK--HIKKPIRSTVTSLDWHPNN-VLLAAG- 164 (361)
T ss_pred eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhh--hhCCccccceeeeeccCCc-ceeccc-
Confidence 2344556688999999999999999999999999999888664332222 2223467789999999976 466665
Q ss_pred ccCCCeEEEEECCC------------------CceeEEE-cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc-e
Q psy4876 487 GTADRHIYFWNVSS------------------GACLDSI-DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV-K 546 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t------------------~~~~~~~-~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~-~ 546 (609)
+.|+..++|..-- |+++.++ ...+.+..+.|+|+|..|+... .|..+.+-|..... .
T Consensus 165 -s~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~--Hds~v~~~da~~p~~~ 241 (361)
T KOG1523|consen 165 -STDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVG--HDSTVSFVDAAGPSER 241 (361)
T ss_pred -ccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEec--CCCceEEeecCCCchh
Confidence 5899999986421 2233334 3456899999999999999864 79999999986654 3
Q ss_pred EEEEeCCCCCEEEEEEeCCCCEEEEEECC
Q psy4876 547 VAELHGHSARVLNLAMSPDETTVLSAGAD 575 (609)
Q Consensus 547 ~~~l~~h~~~V~~l~~spdg~~L~s~s~D 575 (609)
+..+....-+..++.|-.+. .++.++.|
T Consensus 242 v~~~~~~~lP~ls~~~ise~-~vv~ag~~ 269 (361)
T KOG1523|consen 242 VQSVATAQLPLLSVSWISEN-SVVAAGYD 269 (361)
T ss_pred ccchhhccCCceeeEeecCC-ceeecCCC
Confidence 33333333666777775443 24444444
No 202
>KOG1523|consensus
Probab=99.60 E-value=1.3e-13 Score=133.87 Aligned_cols=228 Identities=14% Similarity=0.212 Sum_probs=169.9
Q ss_pred EEEEEecCCC-eEEEEc-CCeEEEEeCCCCCCCceEEecCCccccccccccccccc-eeeeeeec-CCCCeEEEEEccCC
Q psy4876 272 LNLIDWSHFN-VLAVAL-GGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRA-IDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 272 v~~l~wsp~~-lla~s~-dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-h~~~V~~v~~spdg 347 (609)
|.|.+|++|+ .+|++. ...|.||.... .. .+...++. |+..|++|.|+|..
T Consensus 13 itchAwn~drt~iAv~~~~~evhiy~~~~-------------------------~~~w~~~htls~Hd~~vtgvdWap~s 67 (361)
T KOG1523|consen 13 ITCHAWNSDRTQIAVSPNNHEVHIYSMLG-------------------------ADLWEPAHTLSEHDKIVTGVDWAPKS 67 (361)
T ss_pred eeeeeecCCCceEEeccCCceEEEEEecC-------------------------CCCceeceehhhhCcceeEEeecCCC
Confidence 7899999996 566554 56999999877 45 67788888 99999999999999
Q ss_pred CEEEEEeCCCeEEEEeCC-CC--eeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCe---eEEEEccCCC
Q psy4876 348 YMLGVGTSLGTVQLWDVS-AK--KKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDH---KVALLQNHTQ 419 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~-~~--~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~---~~~~~~~h~~ 419 (609)
+.|++|+.|..-+||... .+ +..-.+..+...++++.| +++.|++|+....|.||-++.... ..++-+.+.+
T Consensus 68 nrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirS 147 (361)
T KOG1523|consen 68 NRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRS 147 (361)
T ss_pred CceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCcccc
Confidence 999999999999999984 33 334455668899999999 578999999999999998876431 1123345778
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCC------------CCCccceEeecCCcccEEEEEEcCCCCcEEEEEec
Q psy4876 420 EVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQH------------TFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGG 487 (609)
Q Consensus 420 ~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~------------~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggG 487 (609)
.|.+++|+|++-+|+.|+.|+.++|+..--... ....+.+..+....+.|..+.|+|.|..|...+
T Consensus 148 tv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~-- 225 (361)
T KOG1523|consen 148 TVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVG-- 225 (361)
T ss_pred ceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEec--
Confidence 899999999999999999999999986421110 011123334445678899999999997776665
Q ss_pred cCCCeEEEEECCCCc-eeEEEc-CCCCeEEEEEcCCCCeEEE
Q psy4876 488 TADRHIYFWNVSSGA-CLDSID-TKSQVCALLWNSDYKELVS 527 (609)
Q Consensus 488 s~Dg~I~iwd~~t~~-~~~~~~-~~~~v~sl~~s~~g~~l~~ 527 (609)
.|..+.+-|..... .+.... .+-+..++.|-.+...+.+
T Consensus 226 -Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~~vv~a 266 (361)
T KOG1523|consen 226 -HDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISENSVVAA 266 (361)
T ss_pred -CCCceEEeecCCCchhccchhhccCCceeeEeecCCceeec
Confidence 79999999987654 233332 2246666766655444433
No 203
>KOG1538|consensus
Probab=99.59 E-value=5.4e-14 Score=147.23 Aligned_cols=229 Identities=17% Similarity=0.242 Sum_probs=170.2
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEE
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVAL 413 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~ 413 (609)
..|..++|.|||..|+.+.. ..+.|||...|..+.++++|...|.+++| +|..+++|+.|..|.+|.-.-.+ ..
T Consensus 13 hci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG---~L 88 (1081)
T KOG1538|consen 13 HCINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG---IL 88 (1081)
T ss_pred cchheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc---ee
Confidence 38999999999988877765 46999999999999999999999999999 79999999999999999865432 22
Q ss_pred EccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeE
Q psy4876 414 LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHI 493 (609)
Q Consensus 414 ~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I 493 (609)
-..|++.|.|+.|+|-...|++++- ...-+|..... .+... .....|.+.+|..||. +++.| -.+|+|
T Consensus 89 kYSH~D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK-------~V~K~-kss~R~~~CsWtnDGq-ylalG--~~nGTI 156 (1081)
T KOG1538|consen 89 KYSHNDAIQCMSFNPITHQLASCSL-SDFGLWSPEQK-------SVSKH-KSSSRIICCSWTNDGQ-YLALG--MFNGTI 156 (1081)
T ss_pred eeccCCeeeEeecCchHHHhhhcch-hhccccChhhh-------hHHhh-hhheeEEEeeecCCCc-EEEEe--ccCceE
Confidence 3469999999999999999999886 45778987653 22222 1345788999999985 66665 479999
Q ss_pred EEEECCCCceeEEEc----CCCCeEEEEEcCCCC-----eEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeC
Q psy4876 494 YFWNVSSGACLDSID----TKSQVCALLWNSDYK-----ELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSP 564 (609)
Q Consensus 494 ~iwd~~t~~~~~~~~----~~~~v~sl~~s~~g~-----~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~sp 564 (609)
.+-+-. |+....++ ..++|.+++|+|... .++++ ....++.+|.+ +|+.+..-+.-.-...|+.+-+
T Consensus 157 siRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~--DW~qTLSFy~L-sG~~Igk~r~L~FdP~CisYf~ 232 (1081)
T KOG1538|consen 157 SIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVA--DWGQTLSFYQL-SGKQIGKDRALNFDPCCISYFT 232 (1081)
T ss_pred EeecCC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEE--eccceeEEEEe-cceeecccccCCCCchhheecc
Confidence 998654 44444443 245899999999753 22221 13344444443 2333332222333457899999
Q ss_pred CCCEEEEEECCCCEEEEEcC
Q psy4876 565 DETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 565 dg~~L~s~s~Dg~I~iWdl~ 584 (609)
+|.++..||.|+.+.+|.-.
T Consensus 233 NGEy~LiGGsdk~L~~fTR~ 252 (1081)
T KOG1538|consen 233 NGEYILLGGSDKQLSLFTRD 252 (1081)
T ss_pred CCcEEEEccCCCceEEEeec
Confidence 99999999999999888644
No 204
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=1e-13 Score=149.80 Aligned_cols=210 Identities=18% Similarity=0.202 Sum_probs=147.7
Q ss_pred CCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecC---CeEEEEEcCCCCe-eEEEEccCCCCeEEEEEccC
Q psy4876 356 LGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRC---GNIVHHDVRSRDH-KVALLQNHTQEVCGLKWSPD 429 (609)
Q Consensus 356 dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~d---g~I~iwd~~~~~~-~~~~~~~h~~~V~~l~~spd 429 (609)
+..|.|||..... .+.+..|...+....| +++.|+.++.+ ..|++||+.++.. .+..+.+ ....++|+||
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g---~~~~~~wSPD 258 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRG---HNGAPAFSPD 258 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCC---ccCceeECCC
Confidence 4689999986544 5667778888999999 57778776643 4699999987642 2222333 3446899999
Q ss_pred CCEEEEEe-CCCcEEE--EeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC-CceeE
Q psy4876 430 GRYLASGG-NDNLLNI--WSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS-GACLD 505 (609)
Q Consensus 430 g~~lasgs-~Dg~I~i--wd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t-~~~~~ 505 (609)
|+.|+.++ .+|.+.| ||+.++ ....+..+...+...+|+|+|..+++++ ..++...||++.. +....
T Consensus 259 G~~La~~~~~~g~~~Iy~~d~~~~-------~~~~lt~~~~~~~~~~wSpDG~~i~f~s--~~~g~~~I~~~~~~~~~~~ 329 (429)
T PRK01742 259 GSRLAFASSKDGVLNIYVMGANGG-------TPSQLTSGAGNNTEPSWSPDGQSILFTS--DRSGSPQVYRMSASGGGAS 329 (429)
T ss_pred CCEEEEEEecCCcEEEEEEECCCC-------CeEeeccCCCCcCCEEECCCCCEEEEEE--CCCCCceEEEEECCCCCeE
Confidence 99888765 5776555 466544 3455666777788999999998777765 3567778887653 22223
Q ss_pred EEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 506 SIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 506 ~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
.+... . ....|+|+|+.+++.++ ..+.+||+.++........+ ....+.|+|||++|+.++.++.+.+|.+..
T Consensus 330 ~l~~~-~-~~~~~SpDG~~ia~~~~---~~i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~ 402 (429)
T PRK01742 330 LVGGR-G-YSAQISADGKTLVMING---DNVVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVS 402 (429)
T ss_pred EecCC-C-CCccCCCCCCEEEEEcC---CCEEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEE
Confidence 33222 2 45789999999988653 45677999888654322222 235688999999999999999999888753
No 205
>KOG0644|consensus
Probab=99.59 E-value=3.1e-15 Score=160.09 Aligned_cols=233 Identities=17% Similarity=0.286 Sum_probs=181.3
Q ss_pred EEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCC
Q psy4876 272 LNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGY 348 (609)
Q Consensus 272 v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~ 348 (609)
|.|..|...+ +++++.|..|+||..++ ..++.... |.+.|+.++.+.+..
T Consensus 193 Vyca~fDrtg~~Iitgsdd~lvKiwS~et---------------------------~~~lAs~rGhs~ditdlavs~~n~ 245 (1113)
T KOG0644|consen 193 VYCAIFDRTGRYIITGSDDRLVKIWSMET---------------------------ARCLASCRGHSGDITDLAVSSNNT 245 (1113)
T ss_pred eeeeeeccccceEeecCccceeeeeeccc---------------------------hhhhccCCCCccccchhccchhhh
Confidence 7777787765 89999999999999776 33556666 999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEE--------------E
Q psy4876 349 MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVAL--------------L 414 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~--------------~ 414 (609)
++|+++.|..|++|.+.++..+..+.+|++.|++|+|.+.- +.+.||++++||.+-.. .+.. +
T Consensus 246 ~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~--sss~dgt~~~wd~r~~~-~~y~prp~~~~~~~~~~s~ 322 (1113)
T KOG0644|consen 246 MIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA--SSSDDGTCRIWDARLEP-RIYVPRPLKFTEKDLVDSI 322 (1113)
T ss_pred hhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc--cCCCCCceEeccccccc-cccCCCCCCcccccceeee
Confidence 99999999999999999999999999999999999998765 77899999999988110 0000 0
Q ss_pred c----------------cCCCCeEEEEEccCCCEEEEEe-----------CCCcEEEEeCCCCCCCCCccceEeecCCcc
Q psy4876 415 Q----------------NHTQEVCGLKWSPDGRYLASGG-----------NDNLLNIWSGVPGQHTFSTQPIHSLSRHQA 467 (609)
Q Consensus 415 ~----------------~h~~~V~~l~~spdg~~lasgs-----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~ 467 (609)
. ....+.-+++|...+-.+++++ .+..+.+|++.++ ...+.+.+|..
T Consensus 323 ~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g------~l~H~l~ghsd 396 (1113)
T KOG0644|consen 323 LFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTG------QLLHNLMGHSD 396 (1113)
T ss_pred eccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccc------hhhhhhccccc
Confidence 0 0001122233333333333333 3455778888887 77888899999
Q ss_pred cEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC
Q psy4876 468 AVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL 544 (609)
Q Consensus 468 ~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~ 544 (609)
.+..+.++|....+..++| .||...|||+-.|..++... .++.+....|+++|..++. ....|+++|.....+
T Consensus 397 ~~yvLd~Hpfn~ri~msag--~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~l--sd~hgql~i~g~gqs 470 (1113)
T KOG0644|consen 397 EVYVLDVHPFNPRIAMSAG--YDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIAL--SDDHGQLYILGTGQS 470 (1113)
T ss_pred ceeeeeecCCCcHhhhhcc--CCCceEeeecccCCcceeeecccceeeccccCCCCceEec--CCCCCceEEeccCCC
Confidence 9999999999998888886 89999999999988776654 5678999999999999888 447788888876443
No 206
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.58 E-value=5.4e-13 Score=144.43 Aligned_cols=219 Identities=18% Similarity=0.157 Sum_probs=149.7
Q ss_pred CCCCeEEEEEccCCCEEEEEeCC---CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEE-EEEecCC--eEEEEEcC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSL---GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYIL-SSGSRCG--NIVHHDVR 405 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~d---g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L-~sgs~dg--~I~iwd~~ 405 (609)
+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +..+.+...++.| ++..| ++.+.+| .|++||+.
T Consensus 202 ~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~ 280 (433)
T PRK04922 202 SAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLG 280 (433)
T ss_pred CCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECC
Confidence 56779999999999999987643 469999998776533 3334445557788 56655 4556655 59999998
Q ss_pred CCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CCc--EEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEE
Q psy4876 406 SRDHKVALLQNHTQEVCGLKWSPDGRYLASGGN-DNL--LNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVL 482 (609)
Q Consensus 406 ~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~-Dg~--I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ll 482 (609)
++. +..+..+.......+|+|||++|+.++. +|. |+++|+.++. ...+..+......++|+|+|..++
T Consensus 281 ~g~--~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~-------~~~lt~~g~~~~~~~~SpDG~~Ia 351 (433)
T PRK04922 281 SRQ--LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS-------AERLTFQGNYNARASVSPDGKKIA 351 (433)
T ss_pred CCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC-------eEEeecCCCCccCEEECCCCCEEE
Confidence 763 4455556556678899999999887764 444 7777776652 222222334455789999998777
Q ss_pred EEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEec-CCCeEEEEECCCCceEEEEeCCCCCEEEEE
Q psy4876 483 ASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGF-AQNQLIIWKYPSLVKVAELHGHSARVLNLA 561 (609)
Q Consensus 483 asggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~-~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~ 561 (609)
++........|.+||+.+++.. .+..........|+|+|+.++..+.. ..+.|.+++.. +.....+..+.+.+...+
T Consensus 352 ~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~ 429 (433)
T PRK04922 352 MVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVREPA 429 (433)
T ss_pred EEECCCCceeEEEEECCCCCeE-ECCCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCCCCc
Confidence 7653112347999999887755 44433345677999999998876532 23468888874 444555655667778888
Q ss_pred EeC
Q psy4876 562 MSP 564 (609)
Q Consensus 562 ~sp 564 (609)
|+|
T Consensus 430 wsp 432 (433)
T PRK04922 430 WSP 432 (433)
T ss_pred cCC
Confidence 876
No 207
>KOG1517|consensus
Probab=99.58 E-value=2.1e-13 Score=149.55 Aligned_cols=247 Identities=19% Similarity=0.282 Sum_probs=174.4
Q ss_pred eEEEEEecCC-C---eEEEEcCCeEEEEeCCCC--CCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEc
Q psy4876 271 YLNLIDWSHF-N---VLAVALGGSIYLWNGESD--SNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWI 344 (609)
Q Consensus 271 ~v~~l~wsp~-~---lla~s~dg~I~iWd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~s 344 (609)
+|..|.+-.+ . +++++.||.|+||+--.. +....+..+.+- .-.... ..+.=.-+.|-
T Consensus 1111 ~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~L---------------s~~~~~-~r~~~~v~dWq 1174 (1387)
T KOG1517|consen 1111 RVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSL---------------SDQLPG-ARGTGLVVDWQ 1174 (1387)
T ss_pred ccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccc---------------cccCcc-CCCCCeeeehh
Confidence 4666665443 2 888999999999975442 112222222211 000011 11222557888
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCeeEEEecC-CCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCe--eEEEEccCC
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVSAKKKCRTMDG-HDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDH--KVALLQNHT 418 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~--~~~~~~~h~ 418 (609)
....+|++++.-..|+|||+.....+..+.. ....|+++.- +|+++++|..||.|++||.+.... .+...+.|.
T Consensus 1175 Q~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~ 1254 (1387)
T KOG1517|consen 1175 QQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHN 1254 (1387)
T ss_pred hhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccC
Confidence 8776777777678999999998877776653 4556777776 479999999999999999987643 577788898
Q ss_pred CC--eEEEEEccCCCE-EEEEeCCCcEEEEeCCCCCCCCCccceEeecCC---cccEEEEEEcCCCCcEEEEEeccCCCe
Q psy4876 419 QE--VCGLKWSPDGRY-LASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRH---QAAVKAIAWCPWSPNVLASGGGTADRH 492 (609)
Q Consensus 419 ~~--V~~l~~spdg~~-lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h---~~~V~~l~~sp~~~~llasggGs~Dg~ 492 (609)
.. |..+.+.+.|-- |++|+.||.|++||++.... .....+..| .+.++++..|++. .++|+|+ . +.
T Consensus 1255 ~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~----e~~~~iv~~~~yGs~lTal~VH~ha-piiAsGs--~-q~ 1326 (1387)
T KOG1517|consen 1255 DVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSK----ETFLTIVAHWEYGSALTALTVHEHA-PIIASGS--A-QL 1326 (1387)
T ss_pred CcccceeEEeecCCCcceeeeccCCeEEEEecccCcc----cccceeeeccccCccceeeeeccCC-CeeeecC--c-ce
Confidence 87 999999986654 99999999999999997411 112222222 2358999999976 5888874 3 99
Q ss_pred EEEEECCCCceeEEEcC--------CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC
Q psy4876 493 IYFWNVSSGACLDSIDT--------KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL 544 (609)
Q Consensus 493 I~iwd~~t~~~~~~~~~--------~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~ 544 (609)
|+||++. |+.+..+.. .+.+.+++|+|..-.+++ |+.|+.|.||.....
T Consensus 1327 ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAa--G~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1327 IKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAA--GSADSTVSIYSCEKP 1383 (1387)
T ss_pred EEEEecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhh--ccCCceEEEeecCCc
Confidence 9999986 444444432 136799999999888887 779999999987644
No 208
>KOG1963|consensus
Probab=99.58 E-value=1.1e-12 Score=142.55 Aligned_cols=286 Identities=17% Similarity=0.242 Sum_probs=205.3
Q ss_pred EEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC---CE
Q psy4876 275 IDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG---YM 349 (609)
Q Consensus 275 l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg---~~ 349 (609)
-.||+|+ .+.+..+..|.||...+ +.+.. .++ |...++.+.+.|.. .+
T Consensus 22 avfSnD~k~l~~~~~~~V~VyS~~T-------------------------g~~i~--~l~~~~a~l~s~~~~~~~~~~~~ 74 (792)
T KOG1963|consen 22 AVFSNDAKFLFLCTGNFVKVYSTAT-------------------------GECIT--SLEDHTAPLTSVIVLPSSENANY 74 (792)
T ss_pred cccccCCcEEEEeeCCEEEEEecch-------------------------Hhhhh--hcccccCccceeeecCCCccceE
Confidence 3467775 77788899999999988 55443 455 88999999998865 57
Q ss_pred EEEEeCCCeEEEEeCCCCeeEEEecCCCCc-------------eEE----------------------------------
Q psy4876 350 LGVGTSLGTVQLWDVSAKKKCRTMDGHDVR-------------VGA---------------------------------- 382 (609)
Q Consensus 350 Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~-------------V~~---------------------------------- 382 (609)
+.+++.+|.|++||...+.+++++..+-.. +..
T Consensus 75 ~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~ 154 (792)
T KOG1963|consen 75 LIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKG 154 (792)
T ss_pred EEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccch
Confidence 789999999999999998887766522110 000
Q ss_pred -----------EEec-CCEEEEEecCCeEEEEEcCCCCeeE---EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeC
Q psy4876 383 -----------LAWN-TYILSSGSRCGNIVHHDVRSRDHKV---ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSG 447 (609)
Q Consensus 383 -----------l~~~-~~~L~sgs~dg~I~iwd~~~~~~~~---~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~ 447 (609)
|.++ +..+.....+..+.+|.+....... ..-..|...+++.++||.++++|+|..||.|.+|.-
T Consensus 155 d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d 234 (792)
T KOG1963|consen 155 DFLKEHQEPKSIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRD 234 (792)
T ss_pred hhhhhhcCCccEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEec
Confidence 0000 0011111223345566665532111 111246667899999999999999999999999975
Q ss_pred CCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEE
Q psy4876 448 VPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVS 527 (609)
Q Consensus 448 ~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~ 527 (609)
-..+ ........+.-|...|.+++|+++|.+ |.+|| ..+.+.+|.+.+++...--...+.|..+.++||+.+.+.
T Consensus 235 ~~~~--~~~~t~t~lHWH~~~V~~L~fS~~G~~-LlSGG--~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl 309 (792)
T KOG1963|consen 235 FGSS--DDSETCTLLHWHHDEVNSLSFSSDGAY-LLSGG--REGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSL 309 (792)
T ss_pred cccc--cccccceEEEecccccceeEEecCCce-Eeecc--cceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEE
Confidence 4311 111344566678999999999999965 45554 899999999999984444456789999999999999998
Q ss_pred EEecCCCeEEEEECCCCceEEEEeCC-----------CCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 528 AHGFAQNQLIIWKYPSLVKVAELHGH-----------SARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 528 ~sG~~dg~I~Iwd~~~~~~~~~l~~h-----------~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
++ .|++|.+....+.+....+.+- .+-.+.++++|.-+.++-.+..|.|.+||+.+.....+...
T Consensus 310 ~~--~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v 385 (792)
T KOG1963|consen 310 VL--EDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQV 385 (792)
T ss_pred Ee--cCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEE
Confidence 77 6999999998777655554332 34467889999777888899999999999998777655444
No 209
>KOG2394|consensus
Probab=99.57 E-value=1.4e-13 Score=141.66 Aligned_cols=218 Identities=19% Similarity=0.307 Sum_probs=160.6
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCeeEEEec----CCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCeeEEEEccC
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVSAKKKCRTMD----GHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDHKVALLQNH 417 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~~~~~~~~l~----~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h 417 (609)
+++--|.+|-..|.|.+.|....+..+.+. -....|+|+.| +...++++-.+|.+++||...
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~----------- 251 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEI----------- 251 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccc-----------
Confidence 456677789999999999976533222121 23478999999 567888888999999998721
Q ss_pred CCCeEEEEE--ccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEE
Q psy4876 418 TQEVCGLKW--SPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYF 495 (609)
Q Consensus 418 ~~~V~~l~~--spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~i 495 (609)
....+...| .+++..|+....-+ ... ..++..+....+.|..++|+|||.+|..++ .||.++|
T Consensus 252 ~~~~t~p~~~~~k~~~~f~i~t~ks-------k~~-----rNPv~~w~~~~g~in~f~FS~DG~~LA~VS---qDGfLRv 316 (636)
T KOG2394|consen 252 VCGATAPSYQALKDGDQFAILTSKS-------KKT-----RNPVARWHIGEGSINEFAFSPDGKYLATVS---QDGFLRI 316 (636)
T ss_pred cccCCCCcccccCCCCeeEEeeeec-------ccc-----CCccceeEeccccccceeEcCCCceEEEEe---cCceEEE
Confidence 111111222 33565555433211 111 035555555667899999999997666654 8999999
Q ss_pred EECCCCceeEEEcC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeC----------
Q psy4876 496 WNVSSGACLDSIDT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSP---------- 564 (609)
Q Consensus 496 wd~~t~~~~~~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~sp---------- 564 (609)
||..+.+++..+.. -+...+++|+|||++|++ |.+|.-|.||.+...+.+..-++|..+|..|+|.|
T Consensus 317 F~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvt--GGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~ 394 (636)
T KOG2394|consen 317 FDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVT--GGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNN 394 (636)
T ss_pred eeccHHHHHHHHHhhccceEEEEEcCCccEEEe--cCCcceEEEEEeccceEEEeccccccceeeEeecccccccccccc
Confidence 99998877766543 468999999999999999 77999999999999999999999999999999983
Q ss_pred -------------------------CC-------------CEEEEEECCCCEEEEEcCCCccch
Q psy4876 565 -------------------------DE-------------TTVLSAGADETLRLWKIFEKVKSK 590 (609)
Q Consensus 565 -------------------------dg-------------~~L~s~s~Dg~I~iWdl~~~~~~~ 590 (609)
++ -.+.+++.|-.+.+||+.......
T Consensus 395 ~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD~L~~ 458 (636)
T KOG2394|consen 395 FSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCLWDLTEDVLVP 458 (636)
T ss_pred cccccccccchhcccccccCCCCCcCCCcccccccccceEEEeecccccceEEEEecchhhccc
Confidence 01 146788899999999998766544
No 210
>KOG2139|consensus
Probab=99.57 E-value=2.4e-13 Score=133.83 Aligned_cols=227 Identities=21% Similarity=0.301 Sum_probs=163.5
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecC-CCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCe-
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDG-HDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDH- 409 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~- 409 (609)
+-.+..++|++.-..+|++..|-.|++||-.. +....++. ....|.|++| .+..|+.|++.| |.+|.......
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~ 175 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNA 175 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCccccc
Confidence 45678899999878889999999999999877 55555543 4578999999 457888888754 88997653211
Q ss_pred ------------eEEEEccCCCCeEEEEEccCCCEEEEEeC-CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcC
Q psy4876 410 ------------KVALLQNHTQEVCGLKWSPDGRYLASGGN-DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCP 476 (609)
Q Consensus 410 ------------~~~~~~~h~~~V~~l~~spdg~~lasgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 476 (609)
.+....+| -.|+++.|.+||..+++++- |..|.|||..++.. .++. ....+.+.-+.|+|
T Consensus 176 ~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~----~pL~--~~glgg~slLkwSP 248 (445)
T KOG2139|consen 176 NRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQK----IPLI--PKGLGGFSLLKWSP 248 (445)
T ss_pred ccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCc----cccc--ccCCCceeeEEEcC
Confidence 12223345 68999999999999999885 57899999999842 2332 33556789999999
Q ss_pred CCCcEEEEEeccCCCeEEEEEC-CCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC-----------C
Q psy4876 477 WSPNVLASGGGTADRHIYFWNV-SSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS-----------L 544 (609)
Q Consensus 477 ~~~~llasggGs~Dg~I~iwd~-~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~-----------~ 544 (609)
|+..++++. -|+..++|+. ++..+..-.-..+.|...+|+|+|..|+.++ .+.-.+|.+.. +
T Consensus 249 dgd~lfaAt---~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~---sgsp~lysl~f~~~~~~~~~~~~ 322 (445)
T KOG2139|consen 249 DGDVLFAAT---CDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFAC---SGSPRLYSLTFDGEDSVFLRPQS 322 (445)
T ss_pred CCCEEEEec---ccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEE---cCCceEEEEeecCCCccccCccc
Confidence 998888874 7999999954 4555555555666999999999999988765 33444443310 0
Q ss_pred ----ceEEEEe------C---CCCCEEEEEEeCCCCEEEEEECCC
Q psy4876 545 ----VKVAELH------G---HSARVLNLAMSPDETTVLSAGADE 576 (609)
Q Consensus 545 ----~~~~~l~------~---h~~~V~~l~~spdg~~L~s~s~Dg 576 (609)
..+..+. + -.+.+.+++|.|.|.+||+.-..+
T Consensus 323 ~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~ 367 (445)
T KOG2139|consen 323 IKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQ 367 (445)
T ss_pred ceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCC
Confidence 0111111 1 136789999999999999875543
No 211
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.56 E-value=3.9e-13 Score=128.80 Aligned_cols=158 Identities=20% Similarity=0.394 Sum_probs=116.6
Q ss_pred eEEEEEccCCCEEEEEeC----------CCcEEEEeCCCCCCCCCccceEeecC-CcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 421 VCGLKWSPDGRYLASGGN----------DNLLNIWSGVPGQHTFSTQPIHSLSR-HQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~----------Dg~I~iwd~~~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
-..+.|+++|.+|++-.. -+...+|-++... .++..+.- ..++|.+++|+|+|..++++.| ..
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~-----~~~~~i~l~~~~~I~~~~WsP~g~~favi~g-~~ 81 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKN-----IPVESIELKKEGPIHDVAWSPNGNEFAVIYG-SM 81 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCC-----CccceeeccCCCceEEEEECcCCCEEEEEEc-cC
Confidence 356889999988766443 1234555553321 23333332 3457999999999987766653 67
Q ss_pred CCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEE-ecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCE
Q psy4876 490 DRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAH-GFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETT 568 (609)
Q Consensus 490 Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~s-G~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~ 568 (609)
++.|.+||++ ++.+..+. ...+..+.|+|+|+++++++ |...|.|.+||..+.+.+.... | ..++.++|+|||++
T Consensus 82 ~~~v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~ 157 (194)
T PF08662_consen 82 PAKVTLYDVK-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVEWSPDGRY 157 (194)
T ss_pred CcccEEEcCc-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-c-CcEEEEEEcCCCCE
Confidence 8899999997 66666664 45778899999999999864 3346789999999988887764 3 34789999999999
Q ss_pred EEEEEC------CCCEEEEEcCCCcc
Q psy4876 569 VLSAGA------DETLRLWKIFEKVK 588 (609)
Q Consensus 569 L~s~s~------Dg~I~iWdl~~~~~ 588 (609)
|++++. |+.++||++.+...
T Consensus 158 ~~ta~t~~r~~~dng~~Iw~~~G~~l 183 (194)
T PF08662_consen 158 LATATTSPRLRVDNGFKIWSFQGRLL 183 (194)
T ss_pred EEEEEeccceeccccEEEEEecCeEe
Confidence 999874 89999999975543
No 212
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.56 E-value=1.6e-12 Score=140.98 Aligned_cols=218 Identities=15% Similarity=0.110 Sum_probs=151.3
Q ss_pred CCCCeEEEEEccCCCEEEEEeC---CCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEE-EEEecCCe--EEEEEcC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTS---LGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYIL-SSGSRCGN--IVHHDVR 405 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~---dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L-~sgs~dg~--I~iwd~~ 405 (609)
+...+.+.+|+|||+.|+..+. +..|.+||+.+++.. .+..+...+....| +|..| ++.+.+|. |++||+.
T Consensus 200 ~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~ 278 (435)
T PRK05137 200 GSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLR 278 (435)
T ss_pred CCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECC
Confidence 6678999999999999888763 468999999887653 44556667778888 56655 45566655 7777887
Q ss_pred CCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CC--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEE
Q psy4876 406 SRDHKVALLQNHTQEVCGLKWSPDGRYLASGGN-DN--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVL 482 (609)
Q Consensus 406 ~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~-Dg--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ll 482 (609)
++ ....+..+........|+|||+.|+..+. +| .|++||+..+ ....+..+...+....|+|+|+.++
T Consensus 279 ~~--~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~-------~~~~lt~~~~~~~~~~~SpdG~~ia 349 (435)
T PRK05137 279 SG--TTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGS-------NPRRISFGGGRYSTPVWSPRGDLIA 349 (435)
T ss_pred CC--ceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCC-------CeEEeecCCCcccCeEECCCCCEEE
Confidence 75 34556666666778999999999888764 33 6888898765 2334443455567789999998877
Q ss_pred EEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCC----CeEEEEECCCCceEEEEeCCCCCEE
Q psy4876 483 ASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQ----NQLIIWKYPSLVKVAELHGHSARVL 558 (609)
Q Consensus 483 asggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~d----g~I~Iwd~~~~~~~~~l~~h~~~V~ 558 (609)
++.....+..|.+||+..+. ...+.....+..+.|+|+|+.|+..+.... ..|.++|+..+.. ..+. ..+.+.
T Consensus 350 ~~~~~~~~~~i~~~d~~~~~-~~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~-~~~~~~ 426 (435)
T PRK05137 350 FTKQGGGQFSIGVMKPDGSG-ERILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVP-TPGDAS 426 (435)
T ss_pred EEEcCCCceEEEEEECCCCc-eEeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEcc-CCCCcc
Confidence 76532223578999986554 344444446778999999999987653222 3688888865544 3443 244466
Q ss_pred EEEEeC
Q psy4876 559 NLAMSP 564 (609)
Q Consensus 559 ~l~~sp 564 (609)
..+|+|
T Consensus 427 ~p~Wsp 432 (435)
T PRK05137 427 DPAWSP 432 (435)
T ss_pred CcccCC
Confidence 777776
No 213
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=2.8e-12 Score=139.00 Aligned_cols=220 Identities=12% Similarity=0.090 Sum_probs=153.5
Q ss_pred CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEec---CCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCC
Q psy4876 357 GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSR---CGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGR 431 (609)
Q Consensus 357 g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~---dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~ 431 (609)
..|.+||.. +...+.+..|...+.+.+| +++.|+..+. +..|++||+.++. ...+..+.+.+...+|+|||+
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~--~~~l~~~~g~~~~~~~SPDG~ 258 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQ--RELVGNFPGMTFAPRFSPDGR 258 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCc--EEEeecCCCcccCcEECCCCC
Confidence 478899985 4555667778889999999 5777776653 4689999998764 334555666778899999999
Q ss_pred EEE-EEeCCCc--EEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc
Q psy4876 432 YLA-SGGNDNL--LNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID 508 (609)
Q Consensus 432 ~la-sgs~Dg~--I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~ 508 (609)
.|+ +.+.++. |++||+.++ ....+..+........|+|+|..++++........|++||+.+++......
T Consensus 259 ~la~~~~~~g~~~Iy~~d~~~~-------~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~ 331 (435)
T PRK05137 259 KVVMSLSQGGNTDIYTMDLRSG-------TTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISF 331 (435)
T ss_pred EEEEEEecCCCceEEEEECCCC-------ceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeec
Confidence 876 4455554 888898876 234566666667789999999877766521223478999988766544433
Q ss_pred CCCCeEEEEEcCCCCeEEEEEec-CCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC------CCEEEE
Q psy4876 509 TKSQVCALLWNSDYKELVSAHGF-AQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD------ETLRLW 581 (609)
Q Consensus 509 ~~~~v~sl~~s~~g~~l~~~sG~-~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D------g~I~iW 581 (609)
....+....|+|+|+.++..... .+..|.+||...+.. ..+. +...+..+.|+|||+.|+..+.+ ..|.++
T Consensus 332 ~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~ 409 (435)
T PRK05137 332 GGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTV 409 (435)
T ss_pred CCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEE
Confidence 44566778999999999886531 224688889755443 3332 22356788999999988766543 247777
Q ss_pred EcCCCcc
Q psy4876 582 KIFEKVK 588 (609)
Q Consensus 582 dl~~~~~ 588 (609)
++.++..
T Consensus 410 dl~g~~~ 416 (435)
T PRK05137 410 DLTGRNE 416 (435)
T ss_pred ECCCCce
Confidence 7765443
No 214
>KOG1272|consensus
Probab=99.55 E-value=1.4e-14 Score=146.47 Aligned_cols=265 Identities=18% Similarity=0.252 Sum_probs=207.2
Q ss_pred eeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 270 YYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
|.-..++++.+| ++.++..|.|..+|+.+ +. ..+++.-...|.++.|-.+.
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t-------------------------~~--L~~Ei~v~Etv~Dv~~LHne 182 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVT-------------------------KK--LHFEINVMETVRDVTFLHNE 182 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeeccc-------------------------ce--eeeeeehhhhhhhhhhhcch
Confidence 334458888886 88899999999999988 44 34455556789999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
+++|++-. ..+.|||- .|..+..+..| .+|..+.|- -.+|++++..|.+...|+.++ ..+..+..-.+.+..++
T Consensus 183 q~~AVAQK-~y~yvYD~-~GtElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~G-klVa~~~t~~G~~~vm~ 258 (545)
T KOG1272|consen 183 QFFAVAQK-KYVYVYDN-NGTELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTG-KLVASIRTGAGRTDVMK 258 (545)
T ss_pred HHHHhhhh-ceEEEecC-CCcEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechh-hhhHHHHccCCccchhh
Confidence 99998766 67999995 46777777754 567888883 467888899999999999998 47777777788899999
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD 505 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~ 505 (609)
-+|-+..+-+|...|+|.+|..... +++..+..|.++|.+|++.+.|.+++.+| .|+.++|||+++-..+.
T Consensus 259 qNP~NaVih~GhsnGtVSlWSP~sk------ePLvKiLcH~g~V~siAv~~~G~YMaTtG---~Dr~~kIWDlR~~~ql~ 329 (545)
T KOG1272|consen 259 QNPYNAVIHLGHSNGTVSLWSPNSK------EPLVKILCHRGPVSSIAVDRGGRYMATTG---LDRKVKIWDLRNFYQLH 329 (545)
T ss_pred cCCccceEEEcCCCceEEecCCCCc------chHHHHHhcCCCcceEEECCCCcEEeecc---cccceeEeeeccccccc
Confidence 9998889999999999999999887 78888889999999999999986555544 89999999999888888
Q ss_pred EEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC---ceEEEEeCC--CCCEEEEEEeCCCCEEEEEECCCCE
Q psy4876 506 SIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL---VKVAELHGH--SARVLNLAMSPDETTVLSAGADETL 578 (609)
Q Consensus 506 ~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~---~~~~~l~~h--~~~V~~l~~spdg~~L~s~s~Dg~I 578 (609)
++........+++|..|.+.+. ....|.||.-... ..-.-+..| .+.|.++.|.|-...|-.|-.-|.-
T Consensus 330 t~~tp~~a~~ls~SqkglLA~~----~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~t 403 (545)
T KOG1272|consen 330 TYRTPHPASNLSLSQKGLLALS----YGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGIT 403 (545)
T ss_pred eeecCCCccccccccccceeee----cCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCce
Confidence 8877778888999888755443 3568999963211 111112223 3579999999976666655554433
No 215
>KOG2111|consensus
Probab=99.55 E-value=1.4e-11 Score=119.82 Aligned_cols=274 Identities=13% Similarity=0.176 Sum_probs=187.9
Q ss_pred EEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEE-
Q psy4876 275 IDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGV- 352 (609)
Q Consensus 275 l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Las- 352 (609)
++|+.|. -++++.|...+||+.+--+ .....++ +.+.+.-+..--..++||.
T Consensus 11 vs~NQD~ScFava~~~Gfriyn~~P~k-------------------------e~~~r~~-~~~G~~~veMLfR~N~laLV 64 (346)
T KOG2111|consen 11 VSFNQDHSCFAVATDTGFRIYNCDPFK-------------------------ESASRQF-IDGGFKIVEMLFRSNYLALV 64 (346)
T ss_pred EEEccCCceEEEEecCceEEEecCchh-------------------------hhhhhcc-ccCchhhhhHhhhhceEEEe
Confidence 8999985 8899999999999987511 0001111 1111211222222345554
Q ss_pred EeCC------CeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEcc--CCCCeEEE
Q psy4876 353 GTSL------GTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQN--HTQEVCGL 424 (609)
Q Consensus 353 gs~d------g~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~--h~~~V~~l 424 (609)
|+.+ ..|.|||-...+++.++. ...+|.++.+....|++.-. +.|+||.+.+.-+.+..+.. ....++++
T Consensus 65 GGg~~pky~pNkviIWDD~k~~~i~el~-f~~~I~~V~l~r~riVvvl~-~~I~VytF~~n~k~l~~~et~~NPkGlC~~ 142 (346)
T KOG2111|consen 65 GGGSRPKYPPNKVIIWDDLKERCIIELS-FNSEIKAVKLRRDRIVVVLE-NKIYVYTFPDNPKLLHVIETRSNPKGLCSL 142 (346)
T ss_pred cCCCCCCCCCceEEEEecccCcEEEEEE-eccceeeEEEcCCeEEEEec-CeEEEEEcCCChhheeeeecccCCCceEee
Confidence 3332 369999976667777776 67899999998888877754 78999999855444444332 22346666
Q ss_pred EEccCCCEEEE-EeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCce
Q psy4876 425 KWSPDGRYLAS-GGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC 503 (609)
Q Consensus 425 ~~spdg~~las-gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~ 503 (609)
+-+.+..+||. |-.-|.|.|-|+..... .+-..+..|...|.|++.+-+| .++|+++ +..--|||||..+|+.
T Consensus 143 ~~~~~k~~LafPg~k~GqvQi~dL~~~~~----~~p~~I~AH~s~Iacv~Ln~~G-t~vATaS-tkGTLIRIFdt~~g~~ 216 (346)
T KOG2111|consen 143 CPTSNKSLLAFPGFKTGQVQIVDLASTKP----NAPSIINAHDSDIACVALNLQG-TLVATAS-TKGTLIRIFDTEDGTL 216 (346)
T ss_pred cCCCCceEEEcCCCccceEEEEEhhhcCc----CCceEEEcccCceeEEEEcCCc-cEEEEec-cCcEEEEEEEcCCCcE
Confidence 65555556665 44568999999987621 1346778899999999999988 6888885 3445589999999999
Q ss_pred eEEEcCC---CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc---e---------------------EEEEeCCCCC
Q psy4876 504 LDSIDTK---SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV---K---------------------VAELHGHSAR 556 (609)
Q Consensus 504 ~~~~~~~---~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~---~---------------------~~~l~~h~~~ 556 (609)
+.++.-+ ..|.+++|+|+..+|++++ +.|+|+||.+.... . +..+.-..+.
T Consensus 217 l~E~RRG~d~A~iy~iaFSp~~s~LavsS--dKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~ 294 (346)
T KOG2111|consen 217 LQELRRGVDRADIYCIAFSPNSSWLAVSS--DKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGT 294 (346)
T ss_pred eeeeecCCchheEEEEEeCCCccEEEEEc--CCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCC
Confidence 9999754 4899999999999999965 89999999875321 1 1112223455
Q ss_pred EEEEEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 557 VLNLAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 557 V~~l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
..-++|-.+.+.++..+.||+-+=+.+.
T Consensus 295 ~~~~~fg~~~nsvi~i~~Dgsy~k~~f~ 322 (346)
T KOG2111|consen 295 QCIIAFGSETNTVIAICADGSYYKFKFD 322 (346)
T ss_pred cEEEEecCCCCeEEEEEeCCcEEEEEec
Confidence 6667787776778888888887654443
No 216
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=1.7e-12 Score=140.21 Aligned_cols=221 Identities=15% Similarity=0.112 Sum_probs=146.0
Q ss_pred CCCCeEEEEEccCCCEEEEEeCC---CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEE-EEecCCeEEEEEcCCC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSL---GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILS-SGSRCGNIVHHDVRSR 407 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~d---g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~-sgs~dg~I~iwd~~~~ 407 (609)
+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +......+....| ++..|+ +.+.+|...+|.++..
T Consensus 194 ~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~ 272 (427)
T PRK02889 194 SPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNAD 272 (427)
T ss_pred CCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEEECC
Confidence 56788999999999999887643 359999999886543 3334455667888 566665 5677887666654332
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CCcEEEEeC--CCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEE
Q psy4876 408 DHKVALLQNHTQEVCGLKWSPDGRYLASGGN-DNLLNIWSG--VPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLAS 484 (609)
Q Consensus 408 ~~~~~~~~~h~~~V~~l~~spdg~~lasgs~-Dg~I~iwd~--~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llas 484 (609)
......+..+...+....|+|||++|+..+. +|...||.+ ..+ . ...+..+.......+|+|+|+.++.+
T Consensus 273 ~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g------~-~~~lt~~g~~~~~~~~SpDG~~Ia~~ 345 (427)
T PRK02889 273 GSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGG------A-AQRVTFTGSYNTSPRISPDGKLLAYI 345 (427)
T ss_pred CCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCC------c-eEEEecCCCCcCceEECCCCCEEEEE
Confidence 2234555556656677899999998887664 455566654 433 1 22222222334567899999877766
Q ss_pred EeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCC--eEEEEECCCCceEEEEeCCCCCEEEEEE
Q psy4876 485 GGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQN--QLIIWKYPSLVKVAELHGHSARVLNLAM 562 (609)
Q Consensus 485 ggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg--~I~Iwd~~~~~~~~~l~~h~~~V~~l~~ 562 (609)
+....+..|.+||+.+++... +..........|+|+|+.|+.++. ..| .+.+.+. ++.....+..+.+.+...+|
T Consensus 346 s~~~g~~~I~v~d~~~g~~~~-lt~~~~~~~p~~spdg~~l~~~~~-~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~w 422 (427)
T PRK02889 346 SRVGGAFKLYVQDLATGQVTA-LTDTTRDESPSFAPNGRYILYATQ-QGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSW 422 (427)
T ss_pred EccCCcEEEEEEECCCCCeEE-ccCCCCccCceECCCCCEEEEEEe-cCCCEEEEEEEC-CCCceEEeecCCCCCCCCcc
Confidence 531122379999999887543 333334567899999999988753 232 3666666 45556666667777888888
Q ss_pred eCC
Q psy4876 563 SPD 565 (609)
Q Consensus 563 spd 565 (609)
+|-
T Consensus 423 sp~ 425 (427)
T PRK02889 423 GPF 425 (427)
T ss_pred CCC
Confidence 874
No 217
>KOG1240|consensus
Probab=99.54 E-value=1.3e-12 Score=145.56 Aligned_cols=255 Identities=15% Similarity=0.234 Sum_probs=176.4
Q ss_pred eeeeec-CCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCC-------eeEEEecCCCCceEEEEe--cCCEEEEEecC
Q psy4876 328 HLMDLE-GNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSAK-------KKCRTMDGHDVRVGALAW--NTYILSSGSRC 396 (609)
Q Consensus 328 ~l~~~~-h~~~V~~v~~spdg-~~Lasgs~dg~I~iwd~~~~-------~~~~~l~~h~~~V~~l~~--~~~~L~sgs~d 396 (609)
.+..+. |...|..++.+++. .++++|+.||+|++|+...- +...++.....++.++.. +++.+++++.|
T Consensus 1040 lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~D 1119 (1431)
T KOG1240|consen 1040 LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKD 1119 (1431)
T ss_pred EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCC
Confidence 444454 88888888888765 99999999999999998632 223334434566777666 78999999999
Q ss_pred CeEEEEEcCCCC--e----eEEEEccCC-CCeEE-EEEcc-CCC-EEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCc
Q psy4876 397 GNIVHHDVRSRD--H----KVALLQNHT-QEVCG-LKWSP-DGR-YLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ 466 (609)
Q Consensus 397 g~I~iwd~~~~~--~----~~~~~~~h~-~~V~~-l~~sp-dg~-~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~ 466 (609)
|.|.+.+++... . .......+. +.+.+ -+|.. ++. .++.+..-+.|..||+++....+ ..+.....
T Consensus 1120 G~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w----~lk~~~~h 1195 (1431)
T KOG1240|consen 1120 GSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAW----RLKNQLRH 1195 (1431)
T ss_pred CeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHH----hhhcCccc
Confidence 999999987621 1 111122222 23333 33333 333 68888888999999999873321 12223345
Q ss_pred ccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC--CCeEEEEEcCCCC--eEEEEEec-CCCeEEEEEC
Q psy4876 467 AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK--SQVCALLWNSDYK--ELVSAHGF-AQNQLIIWKY 541 (609)
Q Consensus 467 ~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~--~~v~sl~~s~~g~--~l~~~sG~-~dg~I~Iwd~ 541 (609)
+.|++++.+|.+. .++.| +..|.+.+||++-+.++.++.+. .++..+..++-.+ -..+++|. ..+.|.+|++
T Consensus 1196 G~vTSi~idp~~~-WlviG--ts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~ 1272 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCN-WLVIG--TSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNM 1272 (1431)
T ss_pred cceeEEEecCCce-EEEEe--cCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeec
Confidence 7899999999886 66665 58999999999999999888754 4777777777655 33333344 7899999999
Q ss_pred CCCceEEEEeCC-C------------------CCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccc
Q psy4876 542 PSLVKVAELHGH-S------------------ARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 542 ~~~~~~~~l~~h-~------------------~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
.++.+...+... . -.....++..-+..+.+|+.|..||.||.......
T Consensus 1273 ~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1273 ETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred ccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccc
Confidence 988766665432 1 01122233334568999999999999999876654
No 218
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.53 E-value=1.7e-11 Score=128.98 Aligned_cols=274 Identities=14% Similarity=0.125 Sum_probs=177.7
Q ss_pred EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEe
Q psy4876 285 VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWD 363 (609)
Q Consensus 285 ~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd 363 (609)
-..++.|.+.|..+ .+ .+.+++ ....-..+.|+|||+++++++.||.|.++|
T Consensus 12 ~~~~~~v~viD~~t-------------------------~~--~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD 64 (369)
T PF02239_consen 12 ERGSGSVAVIDGAT-------------------------NK--VVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVID 64 (369)
T ss_dssp EGGGTEEEEEETTT--------------------------S--EEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEE
T ss_pred ecCCCEEEEEECCC-------------------------Ce--EEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEE
Confidence 44579999999877 33 344454 233345578999999999999999999999
Q ss_pred CCCCeeEEEecCCCCceEEEEe--cCCEEEEEe-cCCeEEEEEcCCCCeeEEEEcc-------CCCCeEEEEEccCCCEE
Q psy4876 364 VSAKKKCRTMDGHDVRVGALAW--NTYILSSGS-RCGNIVHHDVRSRDHKVALLQN-------HTQEVCGLKWSPDGRYL 433 (609)
Q Consensus 364 ~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs-~dg~I~iwd~~~~~~~~~~~~~-------h~~~V~~l~~spdg~~l 433 (609)
+.+++.+.++..... ..++++ +|+++++++ ..+.+.++|..+.+ .+..+.. ....+.+|..+|....+
T Consensus 65 ~~~~~~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle-~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~f 142 (369)
T PF02239_consen 65 LATGKVVATIKVGGN-PRGIAVSPDGKYVYVANYEPGTVSVIDAETLE-PVKTIPTGGMPVDGPESRVAAIVASPGRPEF 142 (369)
T ss_dssp TTSSSEEEEEE-SSE-EEEEEE--TTTEEEEEEEETTEEEEEETTT---EEEEEE--EE-TTTS---EEEEEE-SSSSEE
T ss_pred CCcccEEEEEecCCC-cceEEEcCCCCEEEEEecCCCceeEecccccc-ceeecccccccccccCCCceeEEecCCCCEE
Confidence 999999999875443 455666 788877665 68999999999874 5555442 23568888889988866
Q ss_pred EEEeC-CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc----
Q psy4876 434 ASGGN-DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID---- 508 (609)
Q Consensus 434 asgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~---- 508 (609)
+..-. .+.|.+.|..... .................|+|+++++++... .+..|.++|..+++.+..++
T Consensus 143 Vv~lkd~~~I~vVdy~d~~-----~~~~~~i~~g~~~~D~~~dpdgry~~va~~--~sn~i~viD~~~~k~v~~i~~g~~ 215 (369)
T PF02239_consen 143 VVNLKDTGEIWVVDYSDPK-----NLKVTTIKVGRFPHDGGFDPDGRYFLVAAN--GSNKIAVIDTKTGKLVALIDTGKK 215 (369)
T ss_dssp EEEETTTTEEEEEETTTSS-----CEEEEEEE--TTEEEEEE-TTSSEEEEEEG--GGTEEEEEETTTTEEEEEEE-SSS
T ss_pred EEEEccCCeEEEEEecccc-----ccceeeecccccccccccCcccceeeeccc--ccceeEEEeeccceEEEEeecccc
Confidence 66555 4888888877652 122223233456678999999987777653 56688888887765443321
Q ss_pred ---------------------------------------------------CCCCeEEEEEcCCCCeEEEEE--ecCCCe
Q psy4876 509 ---------------------------------------------------TKSQVCALLWNSDYKELVSAH--GFAQNQ 535 (609)
Q Consensus 509 ---------------------------------------------------~~~~v~sl~~s~~g~~l~~~s--G~~dg~ 535 (609)
..+.-.-+..+|+++++.+.. +...++
T Consensus 216 p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~ 295 (369)
T PF02239_consen 216 PHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADT 295 (369)
T ss_dssp BEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-
T ss_pred ccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCce
Confidence 111112345688888888751 234689
Q ss_pred EEEEECCCCceEEEEeC-CCCCEEEEEEeCCCCEEEEEECC--CCEEEEEcCCCccchhhhh
Q psy4876 536 LIIWKYPSLVKVAELHG-HSARVLNLAMSPDETTVLSAGAD--ETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 536 I~Iwd~~~~~~~~~l~~-h~~~V~~l~~spdg~~L~s~s~D--g~I~iWdl~~~~~~~k~~~ 594 (609)
|.|+|..+.+.+..+.. -..++.++.|++||+.+..+..| +.|.+||-.+.+..+....
T Consensus 296 v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~~ 357 (369)
T PF02239_consen 296 VQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIPV 357 (369)
T ss_dssp EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE-
T ss_pred EEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEEe
Confidence 99999999988777742 22359999999999977655444 3699999999887765553
No 219
>KOG3881|consensus
Probab=99.52 E-value=1.1e-12 Score=130.51 Aligned_cols=263 Identities=14% Similarity=0.167 Sum_probs=193.0
Q ss_pred CCCCeEEEEEccCC--CEEEEEeCCCeEEEEeCCCCeeEEEe------cCCCCceEEEEecCCEEEEEecCCeEEEEEcC
Q psy4876 334 GNENVCSVAWIQEG--YMLGVGTSLGTVQLWDVSAKKKCRTM------DGHDVRVGALAWNTYILSSGSRCGNIVHHDVR 405 (609)
Q Consensus 334 h~~~V~~v~~spdg--~~Lasgs~dg~I~iwd~~~~~~~~~l------~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~ 405 (609)
....|++++|.-++ ..|...+.+..+..+++........+ ......|..+..-...|++|-.+|.+.+|...
T Consensus 54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k 133 (412)
T KOG3881|consen 54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLADGTLITCVSSGNLQVRHDK 133 (412)
T ss_pred hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcCCEEEEEecCCcEEEEecc
Confidence 45678889998766 44544446677887777766554443 34556777777766778888999999999988
Q ss_pred CCC---eeEEEEccCCCCeEEEEEccC-CCEEEEEeCC--CcEEEEeCCCCCCCCCccceEe-ecC--CcccEEEEEEcC
Q psy4876 406 SRD---HKVALLQNHTQEVCGLKWSPD-GRYLASGGND--NLLNIWSGVPGQHTFSTQPIHS-LSR--HQAAVKAIAWCP 476 (609)
Q Consensus 406 ~~~---~~~~~~~~h~~~V~~l~~spd-g~~lasgs~D--g~I~iwd~~~~~~~~~~~~~~~-~~~--h~~~V~~l~~sp 476 (609)
.+. .....+..+ ..+..+.-++. ...+|+|+.. +.+.|||+.+....+..+.+.. .-+ -.-+++++.|-+
T Consensus 134 ~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~ 212 (412)
T KOG3881|consen 134 SGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLE 212 (412)
T ss_pred CCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecC
Confidence 543 123333333 44666666663 4456779988 8899999997733222221110 000 123567888887
Q ss_pred CC-CcEEEEEeccCCCeEEEEECCCC-ceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEE-EeC
Q psy4876 477 WS-PNVLASGGGTADRHIYFWNVSSG-ACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAE-LHG 552 (609)
Q Consensus 477 ~~-~~llasggGs~Dg~I~iwd~~t~-~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~-l~~ 552 (609)
.. .+.|+++ +.-+.+++||.+.+ .++..+... ..++++...|+++.+++ |..-+.+..||.+.+..+.. +.+
T Consensus 213 g~~~~~fat~--T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~--gn~~g~l~~FD~r~~kl~g~~~kg 288 (412)
T KOG3881|consen 213 GSPNYKFATI--TRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYT--GNTKGQLAKFDLRGGKLLGCGLKG 288 (412)
T ss_pred CCCCceEEEE--ecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEE--ecccchhheecccCceeeccccCC
Confidence 52 4567776 47899999999965 467777654 58999999999999999 66899999999999998877 788
Q ss_pred CCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhhhcccccc
Q psy4876 553 HSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEIKNNASKF 601 (609)
Q Consensus 553 h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~~~~~~~~ 601 (609)
-.+.|.+|..+|.+++|+++|-|..|||+|+.+.....+.-.+.+.+..
T Consensus 289 ~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~i 337 (412)
T KOG3881|consen 289 ITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTFI 337 (412)
T ss_pred ccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccEE
Confidence 9999999999999999999999999999999998888877777765553
No 220
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.52 E-value=1.2e-10 Score=122.37 Aligned_cols=257 Identities=13% Similarity=0.183 Sum_probs=172.8
Q ss_pred cceeeeeeecCCCCeEEEEEccCCCEEEEEeC----CCeEEEEeCCCC--e--eEEEecCCCCceEEEEe--cCCEEEEE
Q psy4876 324 RAIDHLMDLEGNENVCSVAWIQEGYMLGVGTS----LGTVQLWDVSAK--K--KCRTMDGHDVRVGALAW--NTYILSSG 393 (609)
Q Consensus 324 ~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~----dg~I~iwd~~~~--~--~~~~l~~h~~~V~~l~~--~~~~L~sg 393 (609)
+.+..+..+........++++|++++|++... +|.|..|++... + .+............++. ++.+|+++
T Consensus 25 g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~va 104 (345)
T PF10282_consen 25 GTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVA 104 (345)
T ss_dssp TEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEE
T ss_pred CCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEE
Confidence 66666665545677788999999999999877 468999988764 2 33333323344556777 57777777
Q ss_pred e-cCCeEEEEEcCCCCeeEEE---Ec----------cCCCCeEEEEEccCCCEEEEEeC-CCcEEEEeCCCCCCCCCccc
Q psy4876 394 S-RCGNIVHHDVRSRDHKVAL---LQ----------NHTQEVCGLKWSPDGRYLASGGN-DNLLNIWSGVPGQHTFSTQP 458 (609)
Q Consensus 394 s-~dg~I~iwd~~~~~~~~~~---~~----------~h~~~V~~l~~spdg~~lasgs~-Dg~I~iwd~~~~~~~~~~~~ 458 (609)
. .+|.|.++++......... +. .......++.|+|+|+++++... ...|++|++....... ..
T Consensus 105 ny~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l--~~ 182 (345)
T PF10282_consen 105 NYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKL--TP 182 (345)
T ss_dssp ETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TE--EE
T ss_pred EccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceE--EE
Confidence 6 5899999999875432222 21 12355788999999998888654 3479999997653111 11
Q ss_pred eEeec-CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC--CCce--eEEEcC-------CCCeEEEEEcCCCCeEE
Q psy4876 459 IHSLS-RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS--SGAC--LDSIDT-------KSQVCALLWNSDYKELV 526 (609)
Q Consensus 459 ~~~~~-~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~--t~~~--~~~~~~-------~~~v~sl~~s~~g~~l~ 526 (609)
...+. .....-..++|+|+++.++++. ..++.|.+|++. ++.. +..+.. ......|.++|+|++|+
T Consensus 183 ~~~~~~~~G~GPRh~~f~pdg~~~Yv~~--e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~ly 260 (345)
T PF10282_consen 183 VDSIKVPPGSGPRHLAFSPDGKYAYVVN--ELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLY 260 (345)
T ss_dssp EEEEECSTTSSEEEEEE-TTSSEEEEEE--TTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEE
T ss_pred eeccccccCCCCcEEEEcCCcCEEEEec--CCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEE
Confidence 22222 2344578999999998888876 479999999998 4432 223321 12578999999999999
Q ss_pred EEEecCCCeEEEEECC--CC--ceEEEEeCCCCCEEEEEEeCCCCEEEEEEC-CCCEEEEEcCC
Q psy4876 527 SAHGFAQNQLIIWKYP--SL--VKVAELHGHSARVLNLAMSPDETTVLSAGA-DETLRLWKIFE 585 (609)
Q Consensus 527 ~~sG~~dg~I~Iwd~~--~~--~~~~~l~~h~~~V~~l~~spdg~~L~s~s~-Dg~I~iWdl~~ 585 (609)
++.. ..+.|.+|++. ++ +.+..+........+++++|+|++|+++.. ++.|.+|++..
T Consensus 261 vsnr-~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~ 323 (345)
T PF10282_consen 261 VSNR-GSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDP 323 (345)
T ss_dssp EEEC-TTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred EEec-cCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence 8754 68899999983 23 334444434455899999999999998874 67899998853
No 221
>KOG1310|consensus
Probab=99.50 E-value=2.3e-13 Score=140.00 Aligned_cols=218 Identities=20% Similarity=0.264 Sum_probs=163.6
Q ss_pred eEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEcc--CCCEEEEEeCCCcEEE
Q psy4876 369 KCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP--DGRYLASGGNDNLLNI 444 (609)
Q Consensus 369 ~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp--dg~~lasgs~Dg~I~i 444 (609)
+...+.||.+.|.++.| +|.+|++|+.|-.+.|||.-........-.+|...|.+++|-| +.+++++|..|..|++
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 34678899999999999 6899999999999999999866444445569999999999999 5678999999999999
Q ss_pred EeCCCCCC----CCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc-eeEEEc-------CC--
Q psy4876 445 WSGVPGQH----TFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA-CLDSID-------TK-- 510 (609)
Q Consensus 445 wd~~~~~~----~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~-~~~~~~-------~~-- 510 (609)
+|+...+. .....+.+.+..|...|+.|+-.|++++.+.+++ .||+|+-+|++... |..... ..
T Consensus 122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~Phtfwsas--EDGtirQyDiREph~c~p~~~~~~~l~ny~~~ 199 (758)
T KOG1310|consen 122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSAS--EDGTIRQYDIREPHVCNPDEDCPSILVNYNPQ 199 (758)
T ss_pred EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEec--CCcceeeecccCCccCCccccccHHHHHhchh
Confidence 99985221 1122566677889999999999999999998884 99999999998632 111111 11
Q ss_pred -CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC--------C----------ceEEEE-eCCC-----------CCEEE
Q psy4876 511 -SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS--------L----------VKVAEL-HGHS-----------ARVLN 559 (609)
Q Consensus 511 -~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~--------~----------~~~~~l-~~h~-----------~~V~~ 559 (609)
-...++..+|...+++++ |..+--.++||.+. + .++.-+ .+|- ..++.
T Consensus 200 lielk~ltisp~rp~~laV-GgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~ 278 (758)
T KOG1310|consen 200 LIELKCLTISPSRPYYLAV-GGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTY 278 (758)
T ss_pred hheeeeeeecCCCCceEEe-cCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEE
Confidence 246788999988776665 55889999999421 1 112222 2332 12577
Q ss_pred EEEeCCCCEEEEEECCCCEEEEEcCCCccc
Q psy4876 560 LAMSPDETTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 560 l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
+.|+|+|.-|...-....|+++|+..++..
T Consensus 279 vtfnpNGtElLvs~~gEhVYlfdvn~~~~~ 308 (758)
T KOG1310|consen 279 VTFNPNGTELLVSWGGEHVYLFDVNEDKSP 308 (758)
T ss_pred EEECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence 889999986666656678999999877643
No 222
>KOG1524|consensus
Probab=99.49 E-value=6.7e-13 Score=136.32 Aligned_cols=227 Identities=19% Similarity=0.313 Sum_probs=164.0
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe----------cCCEEEEEecCCeEEEEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW----------NTYILSSGSRCGNIVHHD 403 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~----------~~~~L~sgs~dg~I~iwd 403 (609)
|...|.|+.|+.+...+.++++ ..+.+|.-.+......+.-...-|....+ ....|+.++.||.+.+.+
T Consensus 13 ~~e~vc~v~w~~~eei~~~~dD-h~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~ 91 (737)
T KOG1524|consen 13 NSEKVCCVDWSSNEEIYFVSDD-HQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN 91 (737)
T ss_pred cceeEEeecccccceEEEeccC-ceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence 6677889999988777765555 45555543333322222211111111111 136788899999999887
Q ss_pred cCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEE
Q psy4876 404 VRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLA 483 (609)
Q Consensus 404 ~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~lla 483 (609)
-.. .....+..|.+.|.+-.|+|||.-|+++++||.|++|.-. | ....++.....+|.|++|.|+...++.
T Consensus 92 k~~--rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs-G------MLRStl~Q~~~~v~c~~W~p~S~~vl~ 162 (737)
T KOG1524|consen 92 KSA--RVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS-G------MLRSTVVQNEESIRCARWAPNSNSIVF 162 (737)
T ss_pred ccc--hhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc-c------hHHHHHhhcCceeEEEEECCCCCceEE
Confidence 553 3556778899999999999999999999999999999854 3 233444556778999999999998888
Q ss_pred EEeccCCCeEEEEECCCCceeEEEc-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEE
Q psy4876 484 SGGGTADRHIYFWNVSSGACLDSID-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAM 562 (609)
Q Consensus 484 sggGs~Dg~I~iwd~~t~~~~~~~~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~ 562 (609)
+. .+.+.|=-+.....+-... +.+-|.++.|++....+++ |++|-..+|||. -|..+..-..|+-+|++++|
T Consensus 163 c~----g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~s--gGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~ 235 (737)
T KOG1524|consen 163 CQ----GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIAS--GGEDFRFKIWDA-QGANLFTSAAEEYAITSVAF 235 (737)
T ss_pred ec----CCeEEEeecccccceeEEeccCcEEEEeecCccccceee--cCCceeEEeecc-cCcccccCChhccceeeeee
Confidence 74 5777777776555444454 4568999999999999998 669999999995 46666666789999999999
Q ss_pred eCCCCEEEEEECCCCEE
Q psy4876 563 SPDETTVLSAGADETLR 579 (609)
Q Consensus 563 spdg~~L~s~s~Dg~I~ 579 (609)
.|| +.++.++. +++|
T Consensus 236 npd-~~~~v~S~-nt~R 250 (737)
T KOG1524|consen 236 NPE-KDYLLWSY-NTAR 250 (737)
T ss_pred ccc-cceeeeee-eeee
Confidence 999 55555543 3444
No 223
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=9.3e-12 Score=134.81 Aligned_cols=216 Identities=18% Similarity=0.145 Sum_probs=148.5
Q ss_pred CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEec---CCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCC
Q psy4876 357 GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSR---CGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGR 431 (609)
Q Consensus 357 g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~---dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~ 431 (609)
..|.+||... ...+.+..+...+.+..| +++.|+..+. +..|++||+.++. ...+..+.+...+++|+|||+
T Consensus 184 ~~l~i~D~~g-~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~--~~~l~~~~g~~~~~~~SpDG~ 260 (433)
T PRK04922 184 YALQVADSDG-YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQ--RELVASFRGINGAPSFSPDGR 260 (433)
T ss_pred EEEEEECCCC-CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCC--EEEeccCCCCccCceECCCCC
Confidence 4689999864 445556667788899999 5777777663 3469999998764 233344445566789999999
Q ss_pred EEEE-EeCCC--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC--eEEEEECCCCceeEE
Q psy4876 432 YLAS-GGNDN--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR--HIYFWNVSSGACLDS 506 (609)
Q Consensus 432 ~las-gs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg--~I~iwd~~t~~~~~~ 506 (609)
.|+. .+.+| .|++||+.++ . +..+..+......++|+|+|..++++.. .++ .|+++|+.+++....
T Consensus 261 ~l~~~~s~~g~~~Iy~~d~~~g------~-~~~lt~~~~~~~~~~~spDG~~l~f~sd--~~g~~~iy~~dl~~g~~~~l 331 (433)
T PRK04922 261 RLALTLSRDGNPEIYVMDLGSR------Q-LTRLTNHFGIDTEPTWAPDGKSIYFTSD--RGGRPQIYRVAASGGSAERL 331 (433)
T ss_pred EEEEEEeCCCCceEEEEECCCC------C-eEECccCCCCccceEECCCCCEEEEEEC--CCCCceEEEEECCCCCeEEe
Confidence 7764 45555 5999999876 2 3445555555678899999987777652 333 477788877765433
Q ss_pred EcCCCCeEEEEEcCCCCeEEEEEecC-CCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC---CCEEEEE
Q psy4876 507 IDTKSQVCALLWNSDYKELVSAHGFA-QNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD---ETLRLWK 582 (609)
Q Consensus 507 ~~~~~~v~sl~~s~~g~~l~~~sG~~-dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D---g~I~iWd 582 (609)
.........+.|+|+|++++..++.. ...|.+||+.++... .+. +........|+|||++|+..+.+ +.|.+++
T Consensus 332 t~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~ 409 (433)
T PRK04922 332 TFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVS 409 (433)
T ss_pred ecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEE
Confidence 32333455789999999998875421 236999999877654 333 33345678999999988776653 3577777
Q ss_pred cCCC
Q psy4876 583 IFEK 586 (609)
Q Consensus 583 l~~~ 586 (609)
+...
T Consensus 410 ~~g~ 413 (433)
T PRK04922 410 TDGR 413 (433)
T ss_pred CCCC
Confidence 7554
No 224
>KOG0771|consensus
Probab=99.49 E-value=3.9e-13 Score=135.19 Aligned_cols=190 Identities=14% Similarity=0.233 Sum_probs=135.3
Q ss_pred EEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeee-ecCCCCeEEEEEccCCCE
Q psy4876 273 NLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMD-LEGNENVCSVAWIQEGYM 349 (609)
Q Consensus 273 ~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~h~~~V~~v~~spdg~~ 349 (609)
.+++++.+| +.+++.||++|||++.. ...+.+ ..|...|.++.|+|||++
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps---------------------------~~t~l~e~~~~~eV~DL~FS~dgk~ 200 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPS---------------------------MLTILEEIAHHAEVKDLDFSPDGKF 200 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCc---------------------------chhhhhhHhhcCccccceeCCCCcE
Confidence 568999985 55688999999999765 222223 338899999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCeeEEEecC--CCCceEEEEe--cC---C--EEEEEecCCeEEEEEcCCCCe----eEEEEcc
Q psy4876 350 LGVGTSLGTVQLWDVSAKKKCRTMDG--HDVRVGALAW--NT---Y--ILSSGSRCGNIVHHDVRSRDH----KVALLQN 416 (609)
Q Consensus 350 Lasgs~dg~I~iwd~~~~~~~~~l~~--h~~~V~~l~~--~~---~--~L~sgs~dg~I~iwd~~~~~~----~~~~~~~ 416 (609)
|++-+.| ..+||+++++..+..... .......+.| ++ . +++....-+.|..||+..... .......
T Consensus 201 lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~ 279 (398)
T KOG0771|consen 201 LASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIK 279 (398)
T ss_pred EEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhh
Confidence 9999998 899999999976665542 2334555666 23 2 222233445666666643321 1111112
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccce-EeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEE
Q psy4876 417 HTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPI-HSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYF 495 (609)
Q Consensus 417 h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~-~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~i 495 (609)
-...|.+++.+.||+++|.|+.||.|-|++..+. +.+ ..-+.|...|+.+.|+|+...+.-+. .|..+.+
T Consensus 280 ~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~l------q~~~~vk~aH~~~VT~ltF~Pdsr~~~svS---s~~~~~v 350 (398)
T KOG0771|consen 280 RFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSL------QRLQYVKEAHLGFVTGLTFSPDSRYLASVS---SDNEAAV 350 (398)
T ss_pred ccCcceeEEEcCCCcEEEEeccCCcEEEEEecee------eeeEeehhhheeeeeeEEEcCCcCcccccc---cCCceeE
Confidence 2346999999999999999999999999999877 333 33457999999999999987665543 5777766
Q ss_pred EECC
Q psy4876 496 WNVS 499 (609)
Q Consensus 496 wd~~ 499 (609)
..+.
T Consensus 351 ~~l~ 354 (398)
T KOG0771|consen 351 TKLA 354 (398)
T ss_pred EEEe
Confidence 6554
No 225
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=3e-11 Score=130.43 Aligned_cols=217 Identities=17% Similarity=0.136 Sum_probs=146.6
Q ss_pred CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEe---cCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCC
Q psy4876 357 GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGS---RCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGR 431 (609)
Q Consensus 357 g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs---~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~ 431 (609)
..|.+||.+.... +.+..+...+...+| +|+.|+..+ .+..|.+||+.++. ...+......+..++|+|||+
T Consensus 179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~--~~~l~~~~~~~~~~~~SPDG~ 255 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--VRQVASFPRHNGAPAFSPDGS 255 (429)
T ss_pred eeEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC--eEEccCCCCCcCCeEECCCCC
Confidence 3789999875443 444556778899999 577777554 23579999998764 223333334455789999999
Q ss_pred EEEEE-eCCC--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC--eEEEEECCCCceeEE
Q psy4876 432 YLASG-GNDN--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR--HIYFWNVSSGACLDS 506 (609)
Q Consensus 432 ~lasg-s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg--~I~iwd~~t~~~~~~ 506 (609)
.|+.. +.+| .|++||+.++ . +..+..+...+....|+|+|..++++.. .++ .|+++|+.+++....
T Consensus 256 ~La~~~~~~g~~~I~~~d~~tg------~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~--~~g~~~Iy~~d~~~g~~~~l 326 (429)
T PRK03629 256 KLAFALSKTGSLNLYVMDLASG------Q-IRQVTDGRSNNTEPTWFPDSQNLAYTSD--QAGRPQVYKVNINGGAPQRI 326 (429)
T ss_pred EEEEEEcCCCCcEEEEEECCCC------C-EEEccCCCCCcCceEECCCCCEEEEEeC--CCCCceEEEEECCCCCeEEe
Confidence 88865 3344 5999999876 2 3344445556788999999987776652 333 566667777655433
Q ss_pred EcCCCCeEEEEEcCCCCeEEEEEec-CCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCC---EEEEE
Q psy4876 507 IDTKSQVCALLWNSDYKELVSAHGF-AQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADET---LRLWK 582 (609)
Q Consensus 507 ~~~~~~v~sl~~s~~g~~l~~~sG~-~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~---I~iWd 582 (609)
...........|+|+|++++.++.. ....|.+||+.++... .+... .......|+|||++|+.++.|+. +.+++
T Consensus 327 t~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~ 404 (429)
T PRK03629 327 TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVS 404 (429)
T ss_pred ecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEE
Confidence 3333456678999999999886531 2246889999877643 33321 23456789999999999998875 67777
Q ss_pred cCCCc
Q psy4876 583 IFEKV 587 (609)
Q Consensus 583 l~~~~ 587 (609)
+.+..
T Consensus 405 ~~G~~ 409 (429)
T PRK03629 405 TDGRF 409 (429)
T ss_pred CCCCC
Confidence 75544
No 226
>KOG4497|consensus
Probab=99.48 E-value=2.2e-11 Score=118.78 Aligned_cols=274 Identities=16% Similarity=0.276 Sum_probs=183.8
Q ss_pred EEEEEecCCC--eEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 272 LNLIDWSHFN--VLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 272 v~~l~wsp~~--lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
|.-|.|..|. ++. ...++.|.+|++.. . +-.+.+. ..+.+.+++|||||
T Consensus 51 i~yieW~ads~~ilC~~yk~~~vqvwsl~Q-------------------------p--ew~ckIdeg~agls~~~WSPdg 103 (447)
T KOG4497|consen 51 IVYIEWKADSCHILCVAYKDPKVQVWSLVQ-------------------------P--EWYCKIDEGQAGLSSISWSPDG 103 (447)
T ss_pred hhheeeeccceeeeeeeeccceEEEEEeec-------------------------c--eeEEEeccCCCcceeeeECCCc
Confidence 3448898885 444 45578999999976 2 3344555 77899999999999
Q ss_pred C-EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEec-----------------------------
Q psy4876 348 Y-MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSR----------------------------- 395 (609)
Q Consensus 348 ~-~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~----------------------------- 395 (609)
+ .|.+..-+-.|.||.+.+.+... +......+..++| +|++.+..++
T Consensus 104 rhiL~tseF~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~Dlt 182 (447)
T KOG4497|consen 104 RHILLTSEFDLRITVWSLNTQKGYL-LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLT 182 (447)
T ss_pred ceEeeeecceeEEEEEEeccceeEE-ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCccccc
Confidence 5 45556668899999998755433 3333444566666 4555554432
Q ss_pred -------CCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCC----------------
Q psy4876 396 -------CGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQH---------------- 452 (609)
Q Consensus 396 -------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~---------------- 452 (609)
+..+.+||---. ..+..+ .-.-.+..++|+|.+++|++|+.|+.++|.+--+-+.
T Consensus 183 gieWsPdg~~laVwd~~Le-ykv~aY-e~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~ 260 (447)
T KOG4497|consen 183 GIEWSPDGNWLAVWDNVLE-YKVYAY-ERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLH 260 (447)
T ss_pred CceECCCCcEEEEecchhh-heeeee-eeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhh
Confidence 123555654321 111111 1234688899999999999999999988765321100
Q ss_pred ---------------------------C-----------CCccceEeec------CCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 453 ---------------------------T-----------FSTQPIHSLS------RHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 453 ---------------------------~-----------~~~~~~~~~~------~h~~~V~~l~~sp~~~~llasggGs 488 (609)
. .....++.++ ...-.+.-++|++|. .++++-...
T Consensus 261 ~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds-~y~aTrnd~ 339 (447)
T KOG4497|consen 261 LLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDS-TYAATRNDK 339 (447)
T ss_pred hhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCc-eEEeeecCC
Confidence 0 0000111111 122346678999987 566665434
Q ss_pred CCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCE
Q psy4876 489 ADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETT 568 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~ 568 (609)
.-..+-+||++..+.-..+....+|....|+|....|+.++| ...+++|...-...+ ...+..-.|..+.|+-+|..
T Consensus 340 ~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg--~srLY~W~psg~~~V-~vP~~GF~i~~l~W~~~g~~ 416 (447)
T KOG4497|consen 340 YPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTG--KSRLYFWAPSGPRVV-GVPKKGFNIQKLQWLQPGEF 416 (447)
T ss_pred CCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcC--CceEEEEcCCCceEE-ecCCCCceeeeEEecCCCcE
Confidence 557899999998887777778889999999999999999875 566999986543333 33444567999999999999
Q ss_pred EEEEECCCCEE
Q psy4876 569 VLSAGADETLR 579 (609)
Q Consensus 569 L~s~s~Dg~I~ 579 (609)
++-.+.|....
T Consensus 417 i~l~~kDafc~ 427 (447)
T KOG4497|consen 417 IVLCGKDAFCV 427 (447)
T ss_pred EEEEcCCceEE
Confidence 99999986443
No 227
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.47 E-value=6.1e-12 Score=120.51 Aligned_cols=142 Identities=18% Similarity=0.367 Sum_probs=105.9
Q ss_pred CeEEEEEcCCCCeeEEEEcc-CCCCeEEEEEccCCCEEEEE--eCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEE
Q psy4876 397 GNIVHHDVRSRDHKVALLQN-HTQEVCGLKWSPDGRYLASG--GNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473 (609)
Q Consensus 397 g~I~iwd~~~~~~~~~~~~~-h~~~V~~l~~spdg~~lasg--s~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~ 473 (609)
|...+|.++..+..+..+.. ..++|.+++|+|+|+.||+. ..++.|.+||++ + ..+..+. ...+..+.
T Consensus 37 ~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~------~~i~~~~--~~~~n~i~ 107 (194)
T PF08662_consen 37 GEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-G------KKIFSFG--TQPRNTIS 107 (194)
T ss_pred eeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-c------cEeEeec--CCCceEEE
Confidence 34555555443334444433 34579999999999987665 356799999997 3 5666663 56778999
Q ss_pred EcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEec----CCCeEEEEECCCCceEEE
Q psy4876 474 WCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGF----AQNQLIIWKYPSLVKVAE 549 (609)
Q Consensus 474 ~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~----~dg~I~Iwd~~~~~~~~~ 549 (609)
|+|+|..+++.|.|...|.|.+||+++.+.+...++. .+..++|+|+|+++++++.. .|+.++||++. |+.+..
T Consensus 108 wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~ 185 (194)
T PF08662_consen 108 WSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYK 185 (194)
T ss_pred ECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEe
Confidence 9999987777665556789999999988888877654 47899999999999998643 48899999984 655544
No 228
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.47 E-value=6.2e-11 Score=124.72 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=162.0
Q ss_pred EEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEE
Q psy4876 275 IDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGV 352 (609)
Q Consensus 275 l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Las 352 (609)
+.+++|+ +++++.||.|.++|+.+ .+ .+.++.......++++++||+++++
T Consensus 42 ~~~s~Dgr~~yv~~rdg~vsviD~~~-------------------------~~--~v~~i~~G~~~~~i~~s~DG~~~~v 94 (369)
T PF02239_consen 42 LKFSPDGRYLYVANRDGTVSVIDLAT-------------------------GK--VVATIKVGGNPRGIAVSPDGKYVYV 94 (369)
T ss_dssp EE-TT-SSEEEEEETTSEEEEEETTS-------------------------SS--EEEEEE-SSEEEEEEE--TTTEEEE
T ss_pred EEecCCCCEEEEEcCCCeEEEEECCc-------------------------cc--EEEEEecCCCcceEEEcCCCCEEEE
Confidence 6788986 66678899999999988 44 4445554566789999999999987
Q ss_pred Ee-CCCeEEEEeCCCCeeEEEecCC-------CCceEEEEe--cCC-EEEEEecCCeEEEEEcCCCCeeEEEEccCCCCe
Q psy4876 353 GT-SLGTVQLWDVSAKKKCRTMDGH-------DVRVGALAW--NTY-ILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEV 421 (609)
Q Consensus 353 gs-~dg~I~iwd~~~~~~~~~l~~h-------~~~V~~l~~--~~~-~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V 421 (609)
+. ..+.|.|+|.++.+.++.+... ..++..+.. ... ++++.-+.+.|.+.|..................
T Consensus 95 ~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~ 174 (369)
T PF02239_consen 95 ANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFP 174 (369)
T ss_dssp EEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTE
T ss_pred EecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccc
Confidence 75 5789999999999988877542 346666655 234 555555568999989876543333333455667
Q ss_pred EEEEEccCCCEEEEE-eCCCcEEEEeCCCCCCC-----------------------------------------------
Q psy4876 422 CGLKWSPDGRYLASG-GNDNLLNIWSGVPGQHT----------------------------------------------- 453 (609)
Q Consensus 422 ~~l~~spdg~~lasg-s~Dg~I~iwd~~~~~~~----------------------------------------------- 453 (609)
....|+|++++++++ ..++.|-++|..++...
T Consensus 175 ~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~ 254 (369)
T PF02239_consen 175 HDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVH 254 (369)
T ss_dssp EEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-S
T ss_pred cccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccc
Confidence 889999999987765 34567777777654210
Q ss_pred --CCccceEeecCCcccEEEEEEcCCCCcEEEE-EeccCCCeEEEEECCCCceeEEEcCCC--CeEEEEEcCCCCeEEEE
Q psy4876 454 --FSTQPIHSLSRHQAAVKAIAWCPWSPNVLAS-GGGTADRHIYFWNVSSGACLDSIDTKS--QVCALLWNSDYKELVSA 528 (609)
Q Consensus 454 --~~~~~~~~~~~h~~~V~~l~~sp~~~~llas-ggGs~Dg~I~iwd~~t~~~~~~~~~~~--~v~sl~~s~~g~~l~~~ 528 (609)
...+.+.++...... .-+..+|+++++.+. -.+...+.|.++|.++.+.+..+.... .+..+.|+++|+++.++
T Consensus 255 d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS 333 (369)
T PF02239_consen 255 DDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVS 333 (369)
T ss_dssp TTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEE
T ss_pred hhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEE
Confidence 011222333322333 456679999888776 111356899999999998888876544 49999999999999998
Q ss_pred EecCCCeEEEEECCCCceEEEEe
Q psy4876 529 HGFAQNQLIIWKYPSLVKVAELH 551 (609)
Q Consensus 529 sG~~dg~I~Iwd~~~~~~~~~l~ 551 (609)
....++.|.|||..+.+.+..+.
T Consensus 334 ~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 334 VWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp EE--TTEEEEEETTTTEEEEEEE
T ss_pred EecCCCEEEEEECCCcEEEEEEE
Confidence 77666799999999999998886
No 229
>KOG1334|consensus
Probab=99.45 E-value=7.1e-13 Score=135.05 Aligned_cols=256 Identities=19% Similarity=0.228 Sum_probs=193.8
Q ss_pred eeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEe-cCCCCceEEEEe----cCCEEEEEecCCeEEEEE
Q psy4876 330 MDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTM-DGHDVRVGALAW----NTYILSSGSRCGNIVHHD 403 (609)
Q Consensus 330 ~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l-~~h~~~V~~l~~----~~~~L~sgs~dg~I~iwd 403 (609)
..+. |.+.|..|.|...|..|++|+.|..|.+||...++....+ .+|...|....| +...+++++.||.+++=.
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~ 215 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE 215 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence 3455 9999999999999999999999999999999988766555 468888887777 357889999999999887
Q ss_pred cCCCCee--EEEEccCCCCeEEEEEccCC-CEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcc---cEEEEEEcCC
Q psy4876 404 VRSRDHK--VALLQNHTQEVCGLKWSPDG-RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQA---AVKAIAWCPW 477 (609)
Q Consensus 404 ~~~~~~~--~~~~~~h~~~V~~l~~spdg-~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~---~V~~l~~sp~ 477 (609)
+...... ...+..|.+.|.-++.-|+. .-|.+++.|+.|.-+|++...... .+..-..+.. ....++..|.
T Consensus 216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~---~~~cr~~~~~~~v~L~~Ia~~P~ 292 (559)
T KOG1334|consen 216 ILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAE---KFVCREADEKERVGLYTIAVDPR 292 (559)
T ss_pred eccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccc---eeeeeccCCccceeeeeEecCCC
Confidence 7644322 45567899999999999955 458999999999999999874321 1112222333 5678999999
Q ss_pred CCcEEEEEeccCCCeEEEEECCCCce------eEEE-------cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC-
Q psy4876 478 SPNVLASGGGTADRHIYFWNVSSGAC------LDSI-------DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS- 543 (609)
Q Consensus 478 ~~~llasggGs~Dg~I~iwd~~t~~~------~~~~-------~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~- 543 (609)
..+.+++|| .|..+++||.+.-.. +..+ .....|++++|+.++..|++ .+.|-.|++|.-..
T Consensus 293 nt~~faVgG--~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLa--SYnDe~IYLF~~~~~ 368 (559)
T KOG1334|consen 293 NTNEFAVGG--SDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLA--SYNDEDIYLFNKSMG 368 (559)
T ss_pred CccccccCC--hhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceee--eecccceEEeccccc
Confidence 988999986 899999999874221 1222 12347999999998888888 45799999995321
Q ss_pred -C----------ceEE-EEeCCCC--CEEEEEE-eCCCCEEEEEECCCCEEEEEcCCCccchhh
Q psy4876 544 -L----------VKVA-ELHGHSA--RVLNLAM-SPDETTVLSAGADETLRLWKIFEKVKSKKK 592 (609)
Q Consensus 544 -~----------~~~~-~l~~h~~--~V~~l~~-spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~ 592 (609)
| ..+. .++||.. .|.++-| -|...++++|+.-|.|.||+-.+++...-.
T Consensus 369 ~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~M 432 (559)
T KOG1334|consen 369 DGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFM 432 (559)
T ss_pred cCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHh
Confidence 2 1222 3678864 4667764 678899999999999999998887765443
No 230
>KOG2394|consensus
Probab=99.44 E-value=1.2e-12 Score=134.70 Aligned_cols=163 Identities=20% Similarity=0.369 Sum_probs=124.1
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec---CCCCeEEEEEccCC-CEEEEEeCCC
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE---GNENVCSVAWIQEG-YMLGVGTSLG 357 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---h~~~V~~v~~spdg-~~Lasgs~dg 357 (609)
++.+=.-|.|++.|... ..+..+...+ ....|+|+.|-|.+ ..++++..+|
T Consensus 188 llIGf~tGqvq~idp~~-------------------------~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sG 242 (636)
T KOG2394|consen 188 LLIGFTTGQVQLIDPIN-------------------------FEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASG 242 (636)
T ss_pred eEEeeccCceEEecchh-------------------------hHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecC
Confidence 66666678888888755 2222222211 45789999999966 5666788899
Q ss_pred eEEEEeCCC--------------CeeEEE--------------ecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCC
Q psy4876 358 TVQLWDVSA--------------KKKCRT--------------MDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSR 407 (609)
Q Consensus 358 ~I~iwd~~~--------------~~~~~~--------------l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~ 407 (609)
.+.+||..- +..... +.-..+.|..++| ++.+|++.+.||.++|+|+.+.
T Consensus 243 nlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~ 322 (636)
T KOG2394|consen 243 NLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQ 322 (636)
T ss_pred ceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHH
Confidence 999997631 111111 1112346667777 6899999999999999999985
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcC
Q psy4876 408 DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCP 476 (609)
Q Consensus 408 ~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 476 (609)
+.+..++..-+...|++|||||++|++|++|..|.||.+... +.+..-++|..+|..|+|.|
T Consensus 323 -eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~er------RVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 323 -ELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEER------RVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred -HHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccc------eEEEeccccccceeeEeecc
Confidence 466666666788999999999999999999999999999887 78888899999999999984
No 231
>KOG2315|consensus
Probab=99.44 E-value=6.4e-11 Score=123.13 Aligned_cols=286 Identities=13% Similarity=0.170 Sum_probs=200.3
Q ss_pred EEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEE
Q psy4876 272 LNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYML 350 (609)
Q Consensus 272 v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~L 350 (609)
++..++|++| ++|.+.+..|.|++..+ .. .+.+.... .++++.|+|.|.+|
T Consensus 37 ~~v~~~S~~G~lfA~~~~~~v~i~~~~~-------------------------~~--~~lt~~~~-~~~~L~fSP~g~yL 88 (566)
T KOG2315|consen 37 CNVFAYSNNGRLFAYSDNQVVKVFEIAT-------------------------LK--VVLCVELK-KTYDLLFSPKGNYL 88 (566)
T ss_pred ceeEEEcCCCcEEEEEcCCeEEEEEccC-------------------------Cc--EEEEeccc-eeeeeeeccccccc
Confidence 6678889987 88999999999999987 43 22233223 88999999999998
Q ss_pred EEE-----eC-----CCeEEEEeCCCCeeEEEecCCCCceEEEEec-CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCC
Q psy4876 351 GVG-----TS-----LGTVQLWDVSAKKKCRTMDGHDVRVGALAWN-TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQ 419 (609)
Q Consensus 351 asg-----s~-----dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~-~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 419 (609)
.+- .. .-.+.+|+++++.....+......-+++.|. ...|++--..+.+++|++......... -|..
T Consensus 89 ~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~k--l~~~ 166 (566)
T KOG2315|consen 89 LTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHK--LSVS 166 (566)
T ss_pred ccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhhhhhcceEEEEecCCccceeee--eecc
Confidence 762 11 2357899999865554444322222577774 334444445678999999875433333 3678
Q ss_pred CeEEEEEccCCC--EEEE-----EeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCC--
Q psy4876 420 EVCGLKWSPDGR--YLAS-----GGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTAD-- 490 (609)
Q Consensus 420 ~V~~l~~spdg~--~las-----gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~D-- 490 (609)
.|..+.+||.+. .+|+ +|.-..|+||....... ..++..-.-....--.+.|++-|..||+.....-|
T Consensus 167 ~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~---~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDkt 243 (566)
T KOG2315|consen 167 GITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQ---HQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKT 243 (566)
T ss_pred ceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccc---cchhhhccccccceeEEEeccCCceEEEEEEEeecCC
Confidence 899999999643 3443 34556899998763211 11211111122233468899888777766542233
Q ss_pred -------CeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEe
Q psy4876 491 -------RHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMS 563 (609)
Q Consensus 491 -------g~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~s 563 (609)
.++++.++....+...+...++|.++.|++++++++++.|+.--.+.|||++ +..+..+ -+++=+++-|+
T Consensus 244 n~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fn 320 (566)
T KOG2315|consen 244 NASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFN 320 (566)
T ss_pred CccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEEC
Confidence 4689999986677777888899999999999999999999999999999975 4555554 35667889999
Q ss_pred CCCCEEEEEECC---CCEEEEEcCCCccchhhh
Q psy4876 564 PDETTVLSAGAD---ETLRLWKIFEKVKSKKKE 593 (609)
Q Consensus 564 pdg~~L~s~s~D---g~I~iWdl~~~~~~~k~~ 593 (609)
|.|++|+.||-+ |.|-|||+.+.+...+.+
T Consensus 321 p~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~ 353 (566)
T KOG2315|consen 321 PHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFK 353 (566)
T ss_pred CCCCEEEEeecCCCCCceEEEeccchhhccccc
Confidence 999999998865 789999999855544433
No 232
>KOG4497|consensus
Probab=99.44 E-value=1.4e-11 Score=120.02 Aligned_cols=273 Identities=17% Similarity=0.277 Sum_probs=195.3
Q ss_pred EEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEE-EE
Q psy4876 275 IDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYML-GV 352 (609)
Q Consensus 275 l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~L-as 352 (609)
..|||+| .+|...+-.+.|-|.++ -++.++.. .-+.|.-+.|..|..++ .+
T Consensus 14 c~fSp~g~yiAs~~~yrlviRd~~t-------------------------lq~~qlf~--cldki~yieW~ads~~ilC~ 66 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSRYRLVIRDSET-------------------------LQLHQLFL--CLDKIVYIEWKADSCHILCV 66 (447)
T ss_pred eeECCCCCeeeeeeeeEEEEeccch-------------------------hhHHHHHH--HHHHhhheeeeccceeeeee
Confidence 6789986 88888888999999887 33333322 23667889999988554 45
Q ss_pred EeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cC-CEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccC
Q psy4876 353 GTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NT-YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPD 429 (609)
Q Consensus 353 gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~-~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spd 429 (609)
...++.|.+|++...+-...+......+..++| +| ++|.+..-+-.|.+|.+.+.. ...+.-.+..+.+++|+||
T Consensus 67 ~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~--~~~~~~pK~~~kg~~f~~d 144 (447)
T KOG4497|consen 67 AYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK--GYLLPHPKTNVKGYAFHPD 144 (447)
T ss_pred eeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccce--eEEecccccCceeEEECCC
Confidence 677889999999998888899999999999999 45 677888889999999998753 3333334455688999999
Q ss_pred CCEEEEEeC------------------------------------CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEE
Q psy4876 430 GRYLASGGN------------------------------------DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473 (609)
Q Consensus 430 g~~lasgs~------------------------------------Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~ 473 (609)
|++.+.++. ++.+.+||.--. -.+..+. ..-.+..++
T Consensus 145 g~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Le------ykv~aYe-~~lG~k~v~ 217 (447)
T KOG4497|consen 145 GQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLE------YKVYAYE-RGLGLKFVE 217 (447)
T ss_pred CceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhh------heeeeee-eccceeEEE
Confidence 998877653 123444442211 1111121 224688999
Q ss_pred EcCCCCcEEEEEeccCCCeEEEEECCCCce--------------------------------------------------
Q psy4876 474 WCPWSPNVLASGGGTADRHIYFWNVSSGAC-------------------------------------------------- 503 (609)
Q Consensus 474 ~sp~~~~llasggGs~Dg~I~iwd~~t~~~-------------------------------------------------- 503 (609)
|+|.+ .+++.| +.|+.+++.|--+.+.
T Consensus 218 wsP~~-qflavG--syD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~ 294 (447)
T KOG4497|consen 218 WSPCN-QFLAVG--SYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESET 294 (447)
T ss_pred ecccc-ceEEee--ccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchh
Confidence 99976 577776 5898888765322100
Q ss_pred ----------eEEEc-------CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCC
Q psy4876 504 ----------LDSID-------TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDE 566 (609)
Q Consensus 504 ----------~~~~~-------~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg 566 (609)
+..++ ....+.-++|++|..++++-....-+.+-+||+...+....+. ...+|....|+|..
T Consensus 295 ~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~ 373 (447)
T KOG4497|consen 295 IYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGR 373 (447)
T ss_pred hhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCC
Confidence 00011 1124667899999999999766667889999998877655553 34679999999999
Q ss_pred CEEEEEECCCCEEEEEcCCCc
Q psy4876 567 TTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 567 ~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
..|+.+.....+++|......
T Consensus 374 prL~vctg~srLY~W~psg~~ 394 (447)
T KOG4497|consen 374 PRLVVCTGKSRLYFWAPSGPR 394 (447)
T ss_pred ceEEEEcCCceEEEEcCCCce
Confidence 999988888889999987743
No 233
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=3.9e-11 Score=129.62 Aligned_cols=213 Identities=17% Similarity=0.143 Sum_probs=139.4
Q ss_pred CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecC---CeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCC
Q psy4876 357 GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRC---GNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGR 431 (609)
Q Consensus 357 g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~d---g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~ 431 (609)
..|.+||.. +...+.+..+...+.+.+| +++.|+..+.+ ..|.+||+.++.. ..+....+.+.+.+|+|||+
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~--~~l~~~~g~~~~~~~SPDG~ 252 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRR--RVVANFKGSNSAPAWSPDGR 252 (427)
T ss_pred cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCE--EEeecCCCCccceEECCCCC
Confidence 367777764 4555556667888999999 57777766542 4599999987642 23333445567899999999
Q ss_pred EEEE-EeCCCcEEEEe--CCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEE--ECCCCceeEE
Q psy4876 432 YLAS-GGNDNLLNIWS--GVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFW--NVSSGACLDS 506 (609)
Q Consensus 432 ~las-gs~Dg~I~iwd--~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iw--d~~t~~~~~~ 506 (609)
.|+. .+.+|...||. +..+ ....+..+...+....|+|||..+++++. .++...+| ++.++.....
T Consensus 253 ~la~~~~~~g~~~Iy~~d~~~~-------~~~~lt~~~~~~~~~~wSpDG~~l~f~s~--~~g~~~Iy~~~~~~g~~~~l 323 (427)
T PRK02889 253 TLAVALSRDGNSQIYTVNADGS-------GLRRLTQSSGIDTEPFFSPDGRSIYFTSD--RGGAPQIYRMPASGGAAQRV 323 (427)
T ss_pred EEEEEEccCCCceEEEEECCCC-------CcEECCCCCCCCcCeEEcCCCCEEEEEec--CCCCcEEEEEECCCCceEEE
Confidence 8874 56677756555 4433 34455556556677899999988776642 34555555 5555543332
Q ss_pred EcCCCCeEEEEEcCCCCeEEEEEec-CCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCC-C--EEEEE
Q psy4876 507 IDTKSQVCALLWNSDYKELVSAHGF-AQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADE-T--LRLWK 582 (609)
Q Consensus 507 ~~~~~~v~sl~~s~~g~~l~~~sG~-~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg-~--I~iWd 582 (609)
...........|+|+|++++.++.. ....|.+||+.+++... +..+ .......|+|||+.|+.++.++ . +.+.+
T Consensus 324 t~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~ 401 (427)
T PRK02889 324 TFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVS 401 (427)
T ss_pred ecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEE
Confidence 2222334568899999999876531 12369999998876543 3222 3346789999999988877654 3 44444
Q ss_pred c
Q psy4876 583 I 583 (609)
Q Consensus 583 l 583 (609)
+
T Consensus 402 ~ 402 (427)
T PRK02889 402 S 402 (427)
T ss_pred C
Confidence 4
No 234
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.42 E-value=9e-11 Score=126.57 Aligned_cols=217 Identities=17% Similarity=0.153 Sum_probs=141.3
Q ss_pred CCCCeEEEEEccCCCEEEEEeCC---CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEE-EEecCC--eEEEEEcC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSL---GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILS-SGSRCG--NIVHHDVR 405 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~d---g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~-sgs~dg--~I~iwd~~ 405 (609)
+...+.+.+|+|||++||.+..+ ..|.+||+.+++... +..+...+.+++| ++..|+ +.+.++ .|++||+.
T Consensus 188 ~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~ 266 (417)
T TIGR02800 188 SREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLD 266 (417)
T ss_pred CCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEEECC
Confidence 45678899999999999987654 479999998875543 3335556667888 566554 455544 58888988
Q ss_pred CCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-C--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEE
Q psy4876 406 SRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND-N--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVL 482 (609)
Q Consensus 406 ~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~D-g--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ll 482 (609)
++. ...+..+........|+|||++|+.++.. + .|++||+.++ . ...+..+...+..+.|+|++..++
T Consensus 267 ~~~--~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~------~-~~~l~~~~~~~~~~~~spdg~~i~ 337 (417)
T TIGR02800 267 GKQ--LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGG------E-VRRLTFRGGYNASPSWSPDGDLIA 337 (417)
T ss_pred CCC--EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCC------C-EEEeecCCCCccCeEECCCCCEEE
Confidence 753 34444455555678999999988876653 3 5888888765 2 234444556677889999998777
Q ss_pred EEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCC-CeEEEEECCCCceEEEEeCCCCCEEEEE
Q psy4876 483 ASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQ-NQLIIWKYPSLVKVAELHGHSARVLNLA 561 (609)
Q Consensus 483 asggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~d-g~I~Iwd~~~~~~~~~l~~h~~~V~~l~ 561 (609)
++........|.+||+.++... .+..........|+|+++.|+..+.... ..+.+.+. ++.....+..+.+.+..++
T Consensus 338 ~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~g~~~~~~ 415 (417)
T TIGR02800 338 FVHREGGGFNIAVMDLDGGGER-VLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVST-DGRFRARLPLGNGDVREPA 415 (417)
T ss_pred EEEccCCceEEEEEeCCCCCeE-EccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEEC-CCceeeECCCCCCCcCCCC
Confidence 7653111237999999876543 3333334456789999999988653221 23555553 3444455544444455444
Q ss_pred E
Q psy4876 562 M 562 (609)
Q Consensus 562 ~ 562 (609)
|
T Consensus 416 w 416 (417)
T TIGR02800 416 W 416 (417)
T ss_pred C
Confidence 4
No 235
>KOG3881|consensus
Probab=99.42 E-value=1.2e-11 Score=123.38 Aligned_cols=219 Identities=17% Similarity=0.288 Sum_probs=167.9
Q ss_pred EEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC-CEEEEE
Q psy4876 275 IDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG-YMLGVG 353 (609)
Q Consensus 275 l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg-~~Lasg 353 (609)
+....+-++++-.+|.+.+|..+.+.. .-..+..+.....+..|.-++.. ..+|+|
T Consensus 111 l~~~dg~Litc~~sG~l~~~~~k~~d~-----------------------hss~l~~la~g~g~~~~r~~~~~p~Iva~G 167 (412)
T KOG3881|consen 111 LKLADGTLITCVSSGNLQVRHDKSGDL-----------------------HSSKLIKLATGPGLYDVRQTDTDPYIVATG 167 (412)
T ss_pred hhhcCCEEEEEecCCcEEEEeccCCcc-----------------------ccccceeeecCCceeeeccCCCCCceEecC
Confidence 333334488888999999999986210 02233344434667777777765 456668
Q ss_pred eCC--CeEEEEeCCCCeeEEEecCC---------CCceEEEEe-c---CCEEEEEecCCeEEEEEcCCCCeeEEEEccCC
Q psy4876 354 TSL--GTVQLWDVSAKKKCRTMDGH---------DVRVGALAW-N---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHT 418 (609)
Q Consensus 354 s~d--g~I~iwd~~~~~~~~~l~~h---------~~~V~~l~~-~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~ 418 (609)
+.. ..+.|||++..+.+..-+.- .-.++.+.| . ...|++++.-+.+++||.+.+..++..+.--.
T Consensus 168 Gke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E 247 (412)
T KOG3881|consen 168 GKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLE 247 (412)
T ss_pred chhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEecccc
Confidence 888 78999999987655543321 234566777 2 57899999999999999998888888888888
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEEC
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNV 498 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~ 498 (609)
..|+++...|+|+++++|..-+.+..||++.+. .....+.+-.+.|++|..+|.+ .+++++| -|+.|+|+|+
T Consensus 248 ~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~k-----l~g~~~kg~tGsirsih~hp~~-~~las~G--LDRyvRIhD~ 319 (412)
T KOG3881|consen 248 NPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGK-----LLGCGLKGITGSIRSIHCHPTH-PVLASCG--LDRYVRIHDI 319 (412)
T ss_pred CcceeeeecCCCcEEEEecccchhheecccCce-----eeccccCCccCCcceEEEcCCC-ceEEeec--cceeEEEeec
Confidence 999999999999999999999999999999883 2334478889999999999976 4777775 8999999999
Q ss_pred CCCceeEEEcCCCCeEEEEEcCCCCe
Q psy4876 499 SSGACLDSIDTKSQVCALLWNSDYKE 524 (609)
Q Consensus 499 ~t~~~~~~~~~~~~v~sl~~s~~g~~ 524 (609)
.+.+++...-..+.++.+.+.++-+.
T Consensus 320 ktrkll~kvYvKs~lt~il~~~~~n~ 345 (412)
T KOG3881|consen 320 KTRKLLHKVYVKSRLTFILLRDDVNI 345 (412)
T ss_pred ccchhhhhhhhhccccEEEecCCccc
Confidence 99888888777888888888665443
No 236
>KOG2321|consensus
Probab=99.42 E-value=3.6e-11 Score=124.87 Aligned_cols=279 Identities=14% Similarity=0.131 Sum_probs=190.4
Q ss_pred EEEEEecCCC--eEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCC
Q psy4876 272 LNLIDWSHFN--VLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGY 348 (609)
Q Consensus 272 v~~l~wsp~~--lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~ 348 (609)
.+.|..+||| ++| |..--.|++||+.. ..+..-..+ ....|.-.-.+.|-.
T Consensus 54 st~ik~s~DGqY~lAtG~YKP~ikvydlan-------------------------LSLKFERhl-Dae~V~feiLsDD~S 107 (703)
T KOG2321|consen 54 STRIKVSPDGQYLLATGTYKPQIKVYDLAN-------------------------LSLKFERHL-DAEVVDFEILSDDYS 107 (703)
T ss_pred cceeEecCCCcEEEEecccCCceEEEEccc-------------------------ceeeeeecc-cccceeEEEeccchh
Confidence 4568888997 444 55678999999987 222211111 234455555555556
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEE
Q psy4876 349 MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKW 426 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 426 (609)
.++.-..|..|.+-... |..... . -...-..++++ ..-|++++....|+-+++..+ ..+..+....+.++++..
T Consensus 108 K~v~L~~DR~IefHak~-G~hy~~-R-IP~~GRDm~y~~~scDly~~gsg~evYRlNLEqG-rfL~P~~~~~~~lN~v~i 183 (703)
T KOG2321|consen 108 KSVFLQNDRTIEFHAKY-GRHYRT-R-IPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQG-RFLNPFETDSGELNVVSI 183 (703)
T ss_pred hheEeecCceeeehhhc-Ceeeee-e-cCcCCccccccCCCccEEEeecCcceEEEEcccc-ccccccccccccceeeee
Confidence 66666677777664322 221111 1 01112233332 223444445567888999987 467777777899999999
Q ss_pred ccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcc-----cEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC
Q psy4876 427 SPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQA-----AVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG 501 (609)
Q Consensus 427 spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~-----~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~ 501 (609)
++...+|++|+.||.|..||.+.............+..|.+ .|+++.|..+| .-+++| +.+|.+.|||+++.
T Consensus 184 n~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~g-L~~aVG--ts~G~v~iyDLRa~ 260 (703)
T KOG2321|consen 184 NEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDG-LHVAVG--TSTGSVLIYDLRAS 260 (703)
T ss_pred cCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCc-eeEEee--ccCCcEEEEEcccC
Confidence 99888999999999999999987643222222222233333 49999999886 344554 69999999999999
Q ss_pred ceeEEEcCCC--CeEEEEEcCC--CCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCC
Q psy4876 502 ACLDSIDTKS--QVCALLWNSD--YKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADET 577 (609)
Q Consensus 502 ~~~~~~~~~~--~v~sl~~s~~--g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~ 577 (609)
+++..-++.. +|..+.|.+. +..+++. +...++|||-.+|+....+.. ...+.++|+-|++.++++|-.+..
T Consensus 261 ~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~---Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~ 336 (703)
T KOG2321|consen 261 KPLLVKDHGYELPIKKLDWQDTDQQNKVVSM---DKRILKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTANESSK 336 (703)
T ss_pred CceeecccCCccceeeecccccCCCceEEec---chHHhhhcccccCCceeeccc-cCCcCceeeecCCceEEEecCCCc
Confidence 9887776654 8999999776 3445542 577899999999999888764 445999999999999999998888
Q ss_pred EEEEEcCCCc
Q psy4876 578 LRLWKIFEKV 587 (609)
Q Consensus 578 I~iWdl~~~~ 587 (609)
+..|=+....
T Consensus 337 m~~yyiP~LG 346 (703)
T KOG2321|consen 337 MHTYYIPSLG 346 (703)
T ss_pred ceeEEccccC
Confidence 7776655433
No 237
>KOG1354|consensus
Probab=99.42 E-value=5.6e-12 Score=123.59 Aligned_cols=246 Identities=15% Similarity=0.253 Sum_probs=178.4
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCe-----eEEEecCCC------------CceEEEEe----cCCEEEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK-----KCRTMDGHD------------VRVGALAW----NTYILSS 392 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~-----~~~~l~~h~------------~~V~~l~~----~~~~L~s 392 (609)
..+-|.+|.|...|.+||+|..+|.|.++.-.... ....++.|. ..|..+.| +...++.
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 45789999999999999999999999999654322 334454454 46778888 4567778
Q ss_pred EecCCeEEEEEcCCCCeeE----------------------------------E-EEccCCCCeEEEEEccCCCEEEEEe
Q psy4876 393 GSRCGNIVHHDVRSRDHKV----------------------------------A-LLQNHTQEVCGLKWSPDGRYLASGG 437 (609)
Q Consensus 393 gs~dg~I~iwd~~~~~~~~----------------------------------~-~~~~h~~~V~~l~~spdg~~lasgs 437 (609)
.+.|.+|++|.+....... + .-.+|.-.|.+|.++.|+..++++.
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD 183 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD 183 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc
Confidence 8899999999886432111 0 1125778899999999999888865
Q ss_pred CCCcEEEEeCCCCCCCCCccceEeec-----CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE----EEc
Q psy4876 438 NDNLLNIWSGVPGQHTFSTQPIHSLS-----RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD----SID 508 (609)
Q Consensus 438 ~Dg~I~iwd~~~~~~~~~~~~~~~~~-----~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~----~~~ 508 (609)
|-.|.+|+++-....+ .+..+. .-..-|++..|+|...++++-. +..|.|++-|++...+.. .++
T Consensus 184 -dLRINLWnlei~d~sF---nIVDIKP~nmEeLteVITsaEFhp~~cn~f~YS--SSKGtIrLcDmR~~aLCd~hsKlfE 257 (433)
T KOG1354|consen 184 -DLRINLWNLEIIDQSF---NIVDIKPANMEELTEVITSAEFHPHHCNVFVYS--SSKGTIRLCDMRQSALCDAHSKLFE 257 (433)
T ss_pred -ceeeeeccccccCCce---eEEEccccCHHHHHHHHhhhccCHhHccEEEEe--cCCCcEEEeechhhhhhcchhhhhc
Confidence 6889999987653221 112222 2234578999999988888776 489999999998543211 111
Q ss_pred ----C---------CCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC-CCCceEEEEeCCC------------CCE---EE
Q psy4876 509 ----T---------KSQVCALLWNSDYKELVSAHGFAQNQLIIWKY-PSLVKVAELHGHS------------ARV---LN 559 (609)
Q Consensus 509 ----~---------~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~-~~~~~~~~l~~h~------------~~V---~~ 559 (609)
. -+.|..+.|+++|+++++- +-.+|+|||+ ...+++..+.-|. +.| ..
T Consensus 258 epedp~~rsffseiIsSISDvKFs~sGryilsR---Dyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFe 334 (433)
T KOG1354|consen 258 EPEDPSSRSFFSEIISSISDVKFSHSGRYILSR---DYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFE 334 (433)
T ss_pred cccCCcchhhHHHHhhhhhceEEccCCcEEEEe---ccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeE
Confidence 0 1357899999999999983 3589999999 4556666666553 122 45
Q ss_pred EEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 560 LAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 560 l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
++|+.++.+++||+..+.++++++..+..
T Consensus 335 c~~sg~~~~v~TGsy~n~frvf~~~~gsk 363 (433)
T KOG1354|consen 335 CSWSGNDSYVMTGSYNNVFRVFNLARGSK 363 (433)
T ss_pred EEEcCCcceEecccccceEEEecCCCCcc
Confidence 78999999999999999999999766554
No 238
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.41 E-value=1.2e-10 Score=126.20 Aligned_cols=220 Identities=15% Similarity=0.112 Sum_probs=143.3
Q ss_pred CCCCeEEEEEccCCCEEEEEeCC---CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEE-EEecCC--eEEEEEcC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSL---GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILS-SGSRCG--NIVHHDVR 405 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~d---g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~-sgs~dg--~I~iwd~~ 405 (609)
+...+...+|+|||+.|+..+.+ ..|.+||+.+++... +....+.+....| +++.|+ +...+| .|++||+.
T Consensus 197 ~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~ 275 (430)
T PRK00178 197 SREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLA 275 (430)
T ss_pred CCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECC
Confidence 56788999999999998876543 369999998876543 3333344556788 566665 555555 68888998
Q ss_pred CCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CC--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEE
Q psy4876 406 SRDHKVALLQNHTQEVCGLKWSPDGRYLASGGN-DN--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVL 482 (609)
Q Consensus 406 ~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~-Dg--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ll 482 (609)
++. ...+..+........|+|||+.|+..+. ++ .|+++|+.+++ ...+...........|+|++..++
T Consensus 276 ~~~--~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~-------~~~lt~~~~~~~~~~~Spdg~~i~ 346 (430)
T PRK00178 276 SRQ--LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR-------AERVTFVGNYNARPRLSADGKTLV 346 (430)
T ss_pred CCC--eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC-------EEEeecCCCCccceEECCCCCEEE
Confidence 763 3445556666677899999998877664 33 58888887662 122221222334578999998877
Q ss_pred EEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEec-CCCeEEEEECCCCceEEEEeCCCCCEEEEE
Q psy4876 483 ASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGF-AQNQLIIWKYPSLVKVAELHGHSARVLNLA 561 (609)
Q Consensus 483 asggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~-~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~ 561 (609)
++........|.+||+.+++... +..........|+|+|+.++.++.. ....|.+++.. +.....+..+.+.+...+
T Consensus 347 ~~~~~~~~~~l~~~dl~tg~~~~-lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~ 424 (430)
T PRK00178 347 MVHRQDGNFHVAAQDLQRGSVRI-LTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTAQGEVREPS 424 (430)
T ss_pred EEEccCCceEEEEEECCCCCEEE-ccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCc
Confidence 76531112368899998876533 3322233456899999999886532 12347777774 333444555556677778
Q ss_pred EeCC
Q psy4876 562 MSPD 565 (609)
Q Consensus 562 ~spd 565 (609)
|+|-
T Consensus 425 ws~~ 428 (430)
T PRK00178 425 WSPY 428 (430)
T ss_pred cCCC
Confidence 8763
No 239
>KOG1272|consensus
Probab=99.41 E-value=8.5e-13 Score=133.76 Aligned_cols=232 Identities=15% Similarity=0.232 Sum_probs=186.7
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCeeEEE
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDHKVAL 413 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~~~~~ 413 (609)
.-.-..+.++.+|++|+.|+.-|.|..+|..++++...+. -...|..+.| +...+++.....-++|||-.. ..++.
T Consensus 129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~G--tElHC 205 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQFFAVAQKKYVYVYDNNG--TELHC 205 (545)
T ss_pred ccCCeeeeecCCccEEEecCCccceeeeecccceeeeeee-hhhhhhhhhhhcchHHHHhhhhceEEEecCCC--cEEee
Confidence 3455678999999999999999999999999999888876 4467888888 444444445567899998764 35677
Q ss_pred EccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeE
Q psy4876 414 LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHI 493 (609)
Q Consensus 414 ~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I 493 (609)
+..| ..|..+.|.|.--+|++++..|.++.-|+..| +.+..+....+.+..++-+|.. -++-+|. ..|+|
T Consensus 206 lk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~G------klVa~~~t~~G~~~vm~qNP~N-aVih~Gh--snGtV 275 (545)
T KOG1272|consen 206 LKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTG------KLVASIRTGAGRTDVMKQNPYN-AVIHLGH--SNGTV 275 (545)
T ss_pred hhhc-CchhhhcccchhheeeecccCCceEEEeechh------hhhHHHHccCCccchhhcCCcc-ceEEEcC--CCceE
Confidence 7655 46889999999889999999999999999999 7788888888889999999976 4666664 79999
Q ss_pred EEEECCCCceeEEEc-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEE
Q psy4876 494 YFWNVSSGACLDSID-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSA 572 (609)
Q Consensus 494 ~iwd~~t~~~~~~~~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~ 572 (609)
.+|.-...+++..+- +.++|.+|++.++|.|++++. .|..++|||++....+.++.. ..+...++||..| ++++
T Consensus 276 SlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG--~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg--lLA~ 350 (545)
T KOG1272|consen 276 SLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTG--LDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG--LLAL 350 (545)
T ss_pred EecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecc--cccceeEeeeccccccceeec-CCCcccccccccc--ceee
Confidence 999999888776654 557999999999999999963 899999999999887776654 3456778888666 4444
Q ss_pred ECCCCEEEEEcC
Q psy4876 573 GADETLRLWKIF 584 (609)
Q Consensus 573 s~Dg~I~iWdl~ 584 (609)
+....|.||.=.
T Consensus 351 ~~G~~v~iw~d~ 362 (545)
T KOG1272|consen 351 SYGDHVQIWKDA 362 (545)
T ss_pred ecCCeeeeehhh
Confidence 555689999643
No 240
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.38 E-value=1.7e-10 Score=125.13 Aligned_cols=218 Identities=16% Similarity=0.122 Sum_probs=141.8
Q ss_pred CCCCeEEEEEccCCCEEEEEeCC-C--eEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEE-EEecCCe--EEEEEcC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSL-G--TVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILS-SGSRCGN--IVHHDVR 405 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~d-g--~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~-sgs~dg~--I~iwd~~ 405 (609)
+...+.+..|+|||+.|+..+.+ + .|.+||+.+++... +...........| +++.|+ +.+.+|. |+++|+.
T Consensus 216 ~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~ 294 (448)
T PRK04792 216 SPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIA 294 (448)
T ss_pred CCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECC
Confidence 56788899999999988876543 2 58899998876433 2222333446677 566555 5566665 7778887
Q ss_pred CCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CC--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEE
Q psy4876 406 SRDHKVALLQNHTQEVCGLKWSPDGRYLASGGN-DN--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVL 482 (609)
Q Consensus 406 ~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~-Dg--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ll 482 (609)
++. ...+..+.......+|+|||++|+..+. ++ .|+++|+.+++ ...+..........+|+|+|..++
T Consensus 295 tg~--~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~-------~~~Lt~~g~~~~~~~~SpDG~~l~ 365 (448)
T PRK04792 295 TKA--LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK-------VSRLTFEGEQNLGGSITPDGRSMI 365 (448)
T ss_pred CCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC-------EEEEecCCCCCcCeeECCCCCEEE
Confidence 653 4445556566778899999998877654 33 57777887662 222222222334578999998877
Q ss_pred EEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCC--eEEEEECCCCceEEEEeCCCCCEEEE
Q psy4876 483 ASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQN--QLIIWKYPSLVKVAELHGHSARVLNL 560 (609)
Q Consensus 483 asggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg--~I~Iwd~~~~~~~~~l~~h~~~V~~l 560 (609)
++........|.++|+.+++... +..........|+|+|+.++..+. .++ .|.+++. ++.....+..+.+.+...
T Consensus 366 ~~~~~~g~~~I~~~dl~~g~~~~-lt~~~~d~~ps~spdG~~I~~~~~-~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p 442 (448)
T PRK04792 366 MVNRTNGKFNIARQDLETGAMQV-LTSTRLDESPSVAPNGTMVIYSTT-YQGKQVLAAVSI-DGRFKARLPAGQGEVKSP 442 (448)
T ss_pred EEEecCCceEEEEEECCCCCeEE-ccCCCCCCCceECCCCCEEEEEEe-cCCceEEEEEEC-CCCceEECcCCCCCcCCC
Confidence 76531112356778888876533 322222335589999999988654 333 4777776 566666666666777888
Q ss_pred EEeC
Q psy4876 561 AMSP 564 (609)
Q Consensus 561 ~~sp 564 (609)
+|+|
T Consensus 443 ~Wsp 446 (448)
T PRK04792 443 AWSP 446 (448)
T ss_pred ccCC
Confidence 8887
No 241
>KOG2321|consensus
Probab=99.37 E-value=2.6e-11 Score=125.95 Aligned_cols=254 Identities=16% Similarity=0.185 Sum_probs=173.9
Q ss_pred cceeeeeeecCCCCeEEEEEccCCCEE-EEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe---cCCEEEEEecCCeE
Q psy4876 324 RAIDHLMDLEGNENVCSVAWIQEGYML-GVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW---NTYILSSGSRCGNI 399 (609)
Q Consensus 324 ~~~~~l~~~~h~~~V~~v~~spdg~~L-asgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I 399 (609)
..++.+..+++....+.|..+|||+|+ |+|..--.|++||+..-.+...- .-...+..+.. +-..++.-..|..|
T Consensus 40 ~rieLiQdfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFER-hlDae~V~feiLsDD~SK~v~L~~DR~I 118 (703)
T KOG2321|consen 40 QRIELIQDFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFER-HLDAEVVDFEILSDDYSKSVFLQNDRTI 118 (703)
T ss_pred HHHHHHHhcCCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeee-cccccceeEEEeccchhhheEeecCcee
Confidence 456677778888899999999999765 56778889999999864432221 11223333222 22344445566677
Q ss_pred EEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCC
Q psy4876 400 VHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSP 479 (609)
Q Consensus 400 ~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 479 (609)
-++.--.. +....+.. .-..++++.-.--|.+++....|+-++++.| ..+..+....+.++++..++-.
T Consensus 119 efHak~G~-hy~~RIP~---~GRDm~y~~~scDly~~gsg~evYRlNLEqG------rfL~P~~~~~~~lN~v~in~~h- 187 (703)
T KOG2321|consen 119 EFHAKYGR-HYRTRIPK---FGRDMKYHKPSCDLYLVGSGSEVYRLNLEQG------RFLNPFETDSGELNVVSINEEH- 187 (703)
T ss_pred eehhhcCe-eeeeecCc---CCccccccCCCccEEEeecCcceEEEEcccc------ccccccccccccceeeeecCcc-
Confidence 66543322 22222221 2234555542223444455567999999998 6777777777899999999965
Q ss_pred cEEEEEeccCCCeEEEEECCCCceeEEEcCCC------------CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceE
Q psy4876 480 NVLASGGGTADRHIYFWNVSSGACLDSIDTKS------------QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKV 547 (609)
Q Consensus 480 ~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~------------~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~ 547 (609)
.||++| +.+|.|.+||.++...+..+.... .|+++.|+.+|-.+++ |..+|.|.|||+++.+++
T Consensus 188 gLla~G--t~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aV--Gts~G~v~iyDLRa~~pl 263 (703)
T KOG2321|consen 188 GLLACG--TEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAV--GTSTGSVLIYDLRASKPL 263 (703)
T ss_pred ceEEec--ccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEe--eccCCcEEEEEcccCCce
Confidence 588876 489999999999888777665332 3999999999988888 668999999999998877
Q ss_pred EEE-eCCCCCEEEEEEeCC--CCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 548 AEL-HGHSARVLNLAMSPD--ETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 548 ~~l-~~h~~~V~~l~~spd--g~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
..- ++..-+|..+.|.+. +..|+|. ....++|||-.++......+.
T Consensus 264 ~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEp 312 (703)
T KOG2321|consen 264 LVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEP 312 (703)
T ss_pred eecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeeccc
Confidence 543 233467899999775 4455555 346889999988876654443
No 242
>KOG0322|consensus
Probab=99.37 E-value=1.6e-11 Score=116.49 Aligned_cols=156 Identities=24% Similarity=0.373 Sum_probs=119.2
Q ss_pred CCCCeEEEEEccC-C--CEEEEEeCCCeEEEEeCCCCeeE----------EEecCCCCceEEEEecC--CEEEEEecCCe
Q psy4876 334 GNENVCSVAWIQE-G--YMLGVGTSLGTVQLWDVSAKKKC----------RTMDGHDVRVGALAWNT--YILSSGSRCGN 398 (609)
Q Consensus 334 h~~~V~~v~~spd-g--~~Lasgs~dg~I~iwd~~~~~~~----------~~l~~h~~~V~~l~~~~--~~L~sgs~dg~ 398 (609)
..+.+.|..|..+ + -+|++|..+|.|.+||+.++..+ .....|..+|.++.++. ..=++|+.+-.
T Consensus 149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dk 228 (323)
T KOG0322|consen 149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDK 228 (323)
T ss_pred ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCcccc
Confidence 3467777776543 3 35677889999999999987433 33346899999999952 23346677778
Q ss_pred EEEEEcCCCCee---EEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEc
Q psy4876 399 IVHHDVRSRDHK---VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWC 475 (609)
Q Consensus 399 I~iwd~~~~~~~---~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 475 (609)
+..|.+...... ...+....-.|..+.+-||++.+|+++.|+.|+||..++. .++..+.-|.+.|.+++|+
T Consensus 229 l~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl------~pLAVLkyHsagvn~vAfs 302 (323)
T KOG0322|consen 229 LVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTL------NPLAVLKYHSAGVNAVAFS 302 (323)
T ss_pred ceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccC------CchhhhhhhhcceeEEEeC
Confidence 888887643111 1122222345888999999999999999999999999998 8899999999999999999
Q ss_pred CCCCcEEEEEeccCCCeEEEEEC
Q psy4876 476 PWSPNVLASGGGTADRHIYFWNV 498 (609)
Q Consensus 476 p~~~~llasggGs~Dg~I~iwd~ 498 (609)
|+. .++|++ +.|++|.+|++
T Consensus 303 pd~-~lmAaa--skD~rISLWkL 322 (323)
T KOG0322|consen 303 PDC-ELMAAA--SKDARISLWKL 322 (323)
T ss_pred CCC-chhhhc--cCCceEEeeec
Confidence 985 577776 49999999986
No 243
>KOG0309|consensus
Probab=99.36 E-value=8.1e-12 Score=132.66 Aligned_cols=287 Identities=17% Similarity=0.237 Sum_probs=204.8
Q ss_pred ceeEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 269 DYYLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 269 ~~~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
+..++.+..+|.| -++.+..-.+++-|+...- .....+..+ ..-.|-.+.|++..
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~gl~i~dld~p~-----------------------~ppr~l~h~-tpw~vad~qws~h~ 79 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQGLYIIDLDDPF-----------------------TPPRWLHHI-TPWQVADVQWSPHP 79 (1081)
T ss_pred cCcccceeeccccchhhhhhhcCeEEEeccCCC-----------------------CCceeeecc-CcchhcceecccCC
Confidence 3446677777865 3333344456677776521 122222222 34457788998864
Q ss_pred --CEEEEEeCCCeEEEEeCCC---CeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCC
Q psy4876 348 --YMLGVGTSLGTVQLWDVSA---KKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQ 419 (609)
Q Consensus 348 --~~Lasgs~dg~I~iwd~~~---~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 419 (609)
.+-++......-.||++.. ......+.+|...|+.+.|+ +.++++++.|-.+..||++.....+.....-..
T Consensus 80 a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s 159 (1081)
T KOG0309|consen 80 AKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRS 159 (1081)
T ss_pred CCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccc
Confidence 5667777778888999863 34455678999999999994 689999999999999999988767766665556
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC
Q psy4876 420 EVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS 499 (609)
Q Consensus 420 ~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~ 499 (609)
.-..++|+-....+.+.+..+.|++||++.+. .++..+.+|...|..++|...-...+.+. +.|++|++||..
T Consensus 160 ~asqVkwnyk~p~vlasshg~~i~vwd~r~gs-----~pl~s~K~~vs~vn~~~fnr~~~s~~~s~--~~d~tvkfw~y~ 232 (1081)
T KOG0309|consen 160 AASQVKWNYKDPNVLASSHGNDIFVWDLRKGS-----TPLCSLKGHVSSVNSIDFNRFKYSEIMSS--SNDGTVKFWDYS 232 (1081)
T ss_pred cCceeeecccCcchhhhccCCceEEEeccCCC-----cceEEecccceeeehHHHhhhhhhhhccc--CCCCceeeeccc
Confidence 67789999844445555667899999999885 78899999999999999977655556665 489999999997
Q ss_pred CC--ceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECC----------CCceEEEEeCCCCCEEEEEEeCCC-
Q psy4876 500 SG--ACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYP----------SLVKVAELHGHSARVLNLAMSPDE- 566 (609)
Q Consensus 500 t~--~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~----------~~~~~~~l~~h~~~V~~l~~spdg- 566 (609)
.. +..+.+....++..-.|-|-|.-.++--...++.+.+++.+ ..+.+..+.||.+.|....|-..+
T Consensus 233 kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e 312 (1081)
T KOG0309|consen 233 KSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKE 312 (1081)
T ss_pred ccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhccc
Confidence 43 34455667778888888887665443211124455555443 236788999999999877764422
Q ss_pred ---------CEEEEEECCCCEEEEEcCCC
Q psy4876 567 ---------TTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 567 ---------~~L~s~s~Dg~I~iWdl~~~ 586 (609)
-.|+|-+.|.++|+|.+...
T Consensus 313 ~~~d~d~rdfQLVTWSkD~~lrlWpI~~~ 341 (1081)
T KOG0309|consen 313 CDGDYDSRDFQLVTWSKDQTLRLWPIDSQ 341 (1081)
T ss_pred ccCCCCccceeEEEeecCCceEeeeccHH
Confidence 27999999999999998653
No 244
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.35 E-value=6.5e-10 Score=119.84 Aligned_cols=234 Identities=15% Similarity=0.134 Sum_probs=144.2
Q ss_pred cceeeeeeecCCCCeEEEEEccCCCEE---EEEeCCC--eEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEec-
Q psy4876 324 RAIDHLMDLEGNENVCSVAWIQEGYML---GVGTSLG--TVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSR- 395 (609)
Q Consensus 324 ~~~~~l~~~~h~~~V~~v~~spdg~~L---asgs~dg--~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~- 395 (609)
+....+.. ....+.+-+|+|||+.+ ++...+| .|.+.++.+++..+.. ...+......| ||+.|+..+.
T Consensus 175 ~~~~~lt~--~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt-~~~g~~~~p~wSPDG~~Laf~s~~ 251 (428)
T PRK01029 175 QNLRPLTQ--EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL-ALQGNQLMPTFSPRKKLLAFISDR 251 (428)
T ss_pred CCceEccc--CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEee-cCCCCccceEECCCCCEEEEEECC
Confidence 44444433 34556788999999742 3444444 5777888876543332 23444455677 5766665442
Q ss_pred CC----eEEEEEcCCC--CeeEEEEccCCCCeEEEEEccCCCEEEEEe-CCCc--EEEEeCCCCCCCCCccceEeecCCc
Q psy4876 396 CG----NIVHHDVRSR--DHKVALLQNHTQEVCGLKWSPDGRYLASGG-NDNL--LNIWSGVPGQHTFSTQPIHSLSRHQ 466 (609)
Q Consensus 396 dg----~I~iwd~~~~--~~~~~~~~~h~~~V~~l~~spdg~~lasgs-~Dg~--I~iwd~~~~~~~~~~~~~~~~~~h~ 466 (609)
+| .+.+|++..+ .........+.......+|+|||+.|+..+ .+|. |+++++.... .....+..+.
T Consensus 252 ~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g-----~~~~~lt~~~ 326 (428)
T PRK01029 252 YGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEG-----QSPRLLTKKY 326 (428)
T ss_pred CCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccc-----cceEEeccCC
Confidence 33 3344676642 122233333334456789999999888766 3564 4444544221 2234444455
Q ss_pred ccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEe-cCCCeEEEEECCCCc
Q psy4876 467 AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHG-FAQNQLIIWKYPSLV 545 (609)
Q Consensus 467 ~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG-~~dg~I~Iwd~~~~~ 545 (609)
..+....|+|+|+.+++++.......|.+||+.+++..........+....|+|+|+.|+.... .....|+++|+..++
T Consensus 327 ~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~ 406 (428)
T PRK01029 327 RNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKK 406 (428)
T ss_pred CCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 5677899999998777765311235799999998877554444446778999999999886542 234678899988776
Q ss_pred eEEEEeCCCCCEEEEEEeCCC
Q psy4876 546 KVAELHGHSARVLNLAMSPDE 566 (609)
Q Consensus 546 ~~~~l~~h~~~V~~l~~spdg 566 (609)
..... ...+.+...+|+|-.
T Consensus 407 ~~~Lt-~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 407 TRKIV-IGSGEKRFPSWGAFP 426 (428)
T ss_pred EEEee-cCCCcccCceecCCC
Confidence 54333 344556778888753
No 245
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.35 E-value=5.6e-10 Score=120.40 Aligned_cols=216 Identities=14% Similarity=0.118 Sum_probs=144.2
Q ss_pred CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecC---CeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCC
Q psy4876 357 GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRC---GNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGR 431 (609)
Q Consensus 357 g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~d---g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~ 431 (609)
..|.++|... ...+.+..+...+....| +++.|+.+..+ ..|++||+.++. ...+..+...+.+++|+|||+
T Consensus 170 ~~l~~~d~~g-~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~--~~~~~~~~~~~~~~~~spDg~ 246 (417)
T TIGR02800 170 YELQVADYDG-ANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ--REKVASFPGMNGAPAFSPDGS 246 (417)
T ss_pred ceEEEEcCCC-CCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC--EEEeecCCCCccceEECCCCC
Confidence 3688888754 334555556777888888 57777776643 479999998763 233344556677899999999
Q ss_pred EEEEE-eCCC--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc
Q psy4876 432 YLASG-GNDN--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID 508 (609)
Q Consensus 432 ~lasg-s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~ 508 (609)
.|+.. +.++ .|++||+.++ ....+..+........|+|++..++++..-.....|+++|+.+++......
T Consensus 247 ~l~~~~~~~~~~~i~~~d~~~~-------~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~ 319 (417)
T TIGR02800 247 KLAVSLSKDGNPDIYVMDLDGK-------QLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTF 319 (417)
T ss_pred EEEEEECCCCCccEEEEECCCC-------CEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec
Confidence 77654 4343 5899998875 233444455555677999999877766521122378889988777544433
Q ss_pred CCCCeEEEEEcCCCCeEEEEEecC-CCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCC---CEEEEEcC
Q psy4876 509 TKSQVCALLWNSDYKELVSAHGFA-QNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADE---TLRLWKIF 584 (609)
Q Consensus 509 ~~~~v~sl~~s~~g~~l~~~sG~~-dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg---~I~iWdl~ 584 (609)
....+..+.|+|+|++++.+.... ...|.+||+.++... .+..+ .......|+|||++|+.++.++ .+.+.+..
T Consensus 320 ~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~ 397 (417)
T TIGR02800 320 RGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVSTD 397 (417)
T ss_pred CCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence 445677889999999998865311 127899998875432 33222 2345678999999888877765 34454543
No 246
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.35 E-value=2.9e-10 Score=116.95 Aligned_cols=280 Identities=14% Similarity=0.190 Sum_probs=193.1
Q ss_pred ceeEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 269 DYYLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 269 ~~~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
++.++.+.|||.| .++...-..|.+|.... .. .+..+.| ..|..+.|+|.+
T Consensus 32 ~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~-------------------------~~--~l~~~~~-~~V~~~~fSP~~ 83 (561)
T COG5354 32 NWPVAYVSESPLGTYLFSEHAAGVECWGGPS-------------------------KA--KLVRFRH-PDVKYLDFSPNE 83 (561)
T ss_pred CcchhheeecCcchheehhhccceEEccccc-------------------------hh--heeeeec-CCceecccCccc
Confidence 5677889999998 66666678899998776 33 4444433 679999999999
Q ss_pred CEEEEEeCCC---------------eEEEEeCCCCeeEEEecCCCCc--eE-EEEe--cCCEEEEEecCCeEEEEEcCCC
Q psy4876 348 YMLGVGTSLG---------------TVQLWDVSAKKKCRTMDGHDVR--VG-ALAW--NTYILSSGSRCGNIVHHDVRSR 407 (609)
Q Consensus 348 ~~Lasgs~dg---------------~I~iwd~~~~~~~~~l~~h~~~--V~-~l~~--~~~~L~sgs~dg~I~iwd~~~~ 407 (609)
+||.+-...+ .+.|||+.++..+..+.+...+ .. -+.| +..+++-. ....++|+++ +.
T Consensus 84 kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~ 161 (561)
T COG5354 84 KYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TD 161 (561)
T ss_pred ceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CC
Confidence 9999865433 4899999999999999876655 33 4555 44444433 3356999997 33
Q ss_pred CeeEEEEccC-CCCeEEEEEccCCC--EEEE-----EeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCC
Q psy4876 408 DHKVALLQNH-TQEVCGLKWSPDGR--YLAS-----GGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSP 479 (609)
Q Consensus 408 ~~~~~~~~~h-~~~V~~l~~spdg~--~las-----gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 479 (609)
......+..- ...|....|+|.|+ .||. .+.+++++||.+... ..+.+..--...-..+.|++.|.
T Consensus 162 n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~------s~l~tk~lfk~~~~qLkW~~~g~ 235 (561)
T COG5354 162 NIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKN------SVLVTKNLFKVSGVQLKWQVLGK 235 (561)
T ss_pred ccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCC------CeeeeeeeEeecccEEEEecCCc
Confidence 2222222211 35688889999643 3444 456789999998855 23322222222335788999998
Q ss_pred cEEEEEec--------cCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe
Q psy4876 480 NVLASGGG--------TADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH 551 (609)
Q Consensus 480 ~llasggG--------s~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~ 551 (609)
.+++-.-. .....++++++....+.......++|...+|.|.++.+++++|..+-.+.++|++.. ....
T Consensus 236 ~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~-- 312 (561)
T COG5354 236 YLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFY-- 312 (561)
T ss_pred eEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEe--
Confidence 77664310 013568899998666555556688999999999999999999999999999999765 2222
Q ss_pred CCCCCEEEEEEeCCCCEEEEEECC---CCEEEEEcCCCc
Q psy4876 552 GHSARVLNLAMSPDETTVLSAGAD---ETLRLWKIFEKV 587 (609)
Q Consensus 552 ~h~~~V~~l~~spdg~~L~s~s~D---g~I~iWdl~~~~ 587 (609)
.....=..+.|+|.+++++.++-| |.|-+||..+.-
T Consensus 313 ~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf 351 (561)
T COG5354 313 FPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRF 351 (561)
T ss_pred cCCcccccccccCcccEEEEecCCccccceEEeccCCce
Confidence 233444567788888888887765 567788776544
No 247
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.34 E-value=3.9e-10 Score=121.53 Aligned_cols=215 Identities=16% Similarity=0.202 Sum_probs=138.6
Q ss_pred EEEecCCC----eEEEEc-C--CeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccC
Q psy4876 274 LIDWSHFN----VLAVAL-G--GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQE 346 (609)
Q Consensus 274 ~l~wsp~~----lla~s~-d--g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spd 346 (609)
.=.||||+ ++.++. + ..|++.++.+ +....+..+. +.....+|+||
T Consensus 189 sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~-------------------------g~~~~lt~~~--g~~~~p~wSPD 241 (428)
T PRK01029 189 TPTWMHIGSGFPYLYVSYKLGVPKIFLGSLEN-------------------------PAGKKILALQ--GNQLMPTFSPR 241 (428)
T ss_pred cceEccCCCceEEEEEEccCCCceEEEEECCC-------------------------CCceEeecCC--CCccceEECCC
Confidence 35799995 222333 2 4688889887 6666665543 44557899999
Q ss_pred CCEEEEEeC-CC----eEEEEeCCCC---eeEEEecCCCCceEEEEe--cCCEEEEEe-cCCeEEEE--EcCCCCeeEEE
Q psy4876 347 GYMLGVGTS-LG----TVQLWDVSAK---KKCRTMDGHDVRVGALAW--NTYILSSGS-RCGNIVHH--DVRSRDHKVAL 413 (609)
Q Consensus 347 g~~Lasgs~-dg----~I~iwd~~~~---~~~~~l~~h~~~V~~l~~--~~~~L~sgs-~dg~I~iw--d~~~~~~~~~~ 413 (609)
|+.||..+. +| .+.+|++..+ +..+....+.......+| +|..|+..+ .+|...+| ++.........
T Consensus 242 G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~ 321 (428)
T PRK01029 242 KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRL 321 (428)
T ss_pred CCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEE
Confidence 988887653 22 3445777653 333333333344456778 577666554 56654444 54432223444
Q ss_pred EccCCCCeEEEEEccCCCEEEEEeCC---CcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCC
Q psy4876 414 LQNHTQEVCGLKWSPDGRYLASGGND---NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTAD 490 (609)
Q Consensus 414 ~~~h~~~V~~l~~spdg~~lasgs~D---g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~D 490 (609)
+..+...+....|+|||++|+..+.+ ..|++||+.+++ . ..+......+....|+|+|..+++++.....
T Consensus 322 lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~------~-~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~ 394 (428)
T PRK01029 322 LTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR------D-YQLTTSPENKESPSWAIDSLHLVYSAGNSNE 394 (428)
T ss_pred eccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC------e-EEccCCCCCccceEECCCCCEEEEEECCCCC
Confidence 55555677889999999998877653 369999998772 2 3333333456789999999888776542235
Q ss_pred CeEEEEECCCCceeEEEcCCCCeEEEEEcCCC
Q psy4876 491 RHIYFWNVSSGACLDSIDTKSQVCALLWNSDY 522 (609)
Q Consensus 491 g~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g 522 (609)
..|++||+..++........+.+...+|+|-.
T Consensus 395 ~~L~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 395 SELYLISLITKKTRKIVIGSGEKRFPSWGAFP 426 (428)
T ss_pred ceEEEEECCCCCEEEeecCCCcccCceecCCC
Confidence 78999999988766555555667778888753
No 248
>KOG2315|consensus
Probab=99.34 E-value=4.4e-10 Score=116.98 Aligned_cols=236 Identities=14% Similarity=0.198 Sum_probs=159.5
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecC----CEEEE-----EecCCeEEEEEcCCCC-
Q psy4876 339 CSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT----YILSS-----GSRCGNIVHHDVRSRD- 408 (609)
Q Consensus 339 ~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~----~~L~s-----gs~dg~I~iwd~~~~~- 408 (609)
++..|+.|..+.|-- ..+.|++|++.+.+.+.. .-|...|+.+.+++ ..+++ ++.-+.|++|.+....
T Consensus 129 W~~qfs~dEsl~arl-v~nev~f~~~~~f~~~~~-kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~ 206 (566)
T KOG2315|consen 129 WVPQFSIDESLAARL-VSNEVQFYDLGSFKTIQH-KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQ 206 (566)
T ss_pred cccccccchhhhhhh-hcceEEEEecCCccceee-eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccc
Confidence 588999887554432 336899999987433221 23677788888842 34433 3455679999887321
Q ss_pred -eeEEEEccCCCCeEEEEEccCCCE-EEEE--eCC---------CcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEc
Q psy4876 409 -HKVALLQNHTQEVCGLKWSPDGRY-LASG--GND---------NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWC 475 (609)
Q Consensus 409 -~~~~~~~~h~~~V~~l~~spdg~~-lasg--s~D---------g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 475 (609)
..+..-.-....=..+.|++-|.- |+.+ .-| .++++.++... .....+ ...++|.++.|+
T Consensus 207 ~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~------s~~V~L-~k~GPVhdv~W~ 279 (566)
T KOG2315|consen 207 HQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGE------SVSVPL-LKEGPVHDVTWS 279 (566)
T ss_pred cchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCc------eEEEec-CCCCCceEEEEC
Confidence 111111111233456889887663 2222 223 36888888732 333333 357899999999
Q ss_pred CCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEE-ecCCCeEEEEECCCCceEEEEeCCC
Q psy4876 476 PWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAH-GFAQNQLIIWKYPSLVKVAELHGHS 554 (609)
Q Consensus 476 p~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~s-G~~dg~I~Iwd~~~~~~~~~l~~h~ 554 (609)
|.+..+.++- |.+-.++.|||++ +..+..+ ..++-..+-|+|.|++++.+. |.-.|.|.|||+.+.+++..+....
T Consensus 280 ~s~~EF~Vvy-GfMPAkvtifnlr-~~~v~df-~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~ 356 (566)
T KOG2315|consen 280 PSGREFAVVY-GFMPAKVTIFNLR-GKPVFDF-PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN 356 (566)
T ss_pred CCCCEEEEEE-ecccceEEEEcCC-CCEeEeC-CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC
Confidence 9997776666 4789999999986 4444443 335667899999999988762 4457899999999999888886544
Q ss_pred CCEEEEEEeCCCCEEEEEEC------CCCEEEEEcCCCcc
Q psy4876 555 ARVLNLAMSPDETTVLSAGA------DETLRLWKIFEKVK 588 (609)
Q Consensus 555 ~~V~~l~~spdg~~L~s~s~------Dg~I~iWdl~~~~~ 588 (609)
. +-+.|+|||++++|++. |+.++||+..+...
T Consensus 357 t--t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l 394 (566)
T KOG2315|consen 357 T--TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLL 394 (566)
T ss_pred c--eEEEEcCCCcEEEEEeccccEEecCCeEEEEecCcee
Confidence 3 55899999999999875 78999999976543
No 249
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.34 E-value=8.6e-10 Score=119.53 Aligned_cols=216 Identities=17% Similarity=0.128 Sum_probs=143.2
Q ss_pred eEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecC---CeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCE
Q psy4876 358 TVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRC---GNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRY 432 (609)
Q Consensus 358 ~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~d---g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 432 (609)
.|.++|.+.+. .+.+..+...+....| +++.|+..+.+ ..|.+||+.++. ...+....+.+....|+|||+.
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~--~~~l~~~~g~~~~~~~SpDG~~ 256 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR--REQITNFEGLNGAPAWSPDGSK 256 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC--EEEccCCCCCcCCeEECCCCCE
Confidence 47788877544 4555567778888999 57777665533 369999998764 2333334445567899999998
Q ss_pred EEE-EeCCC--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcC
Q psy4876 433 LAS-GGNDN--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT 509 (609)
Q Consensus 433 las-gs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~ 509 (609)
|+. .+.+| .|++||+.++ ....+..+........|+|+|..++++........|+++|+.+++.......
T Consensus 257 la~~~~~~g~~~Iy~~d~~~~-------~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~ 329 (430)
T PRK00178 257 LAFVLSKDGNPEIYVMDLASR-------QLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFV 329 (430)
T ss_pred EEEEEccCCCceEEEEECCCC-------CeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC
Confidence 874 44444 6888899876 2334555555667789999998887765311234688889888775433322
Q ss_pred CCCeEEEEEcCCCCeEEEEEecCCC--eEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC---CCEEEEEcC
Q psy4876 510 KSQVCALLWNSDYKELVSAHGFAQN--QLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD---ETLRLWKIF 584 (609)
Q Consensus 510 ~~~v~sl~~s~~g~~l~~~sG~~dg--~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D---g~I~iWdl~ 584 (609)
........|+|+|+.++..+. .++ .|.+||+.+++.. .+. +........|+|||+.|+.++.+ ..|.++++.
T Consensus 330 ~~~~~~~~~Spdg~~i~~~~~-~~~~~~l~~~dl~tg~~~-~lt-~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 330 GNYNARPRLSADGKTLVMVHR-QDGNFHVAAQDLQRGSVR-ILT-DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred CCCccceEECCCCCEEEEEEc-cCCceEEEEEECCCCCEE-Ecc-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 334456789999999988753 233 5888998877643 332 22223356899999988876654 346667775
Q ss_pred CC
Q psy4876 585 EK 586 (609)
Q Consensus 585 ~~ 586 (609)
..
T Consensus 407 g~ 408 (430)
T PRK00178 407 GR 408 (430)
T ss_pred CC
Confidence 43
No 250
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.28 E-value=1.3e-08 Score=103.92 Aligned_cols=171 Identities=14% Similarity=0.112 Sum_probs=127.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCC-eEEEEEcCCCCeeEEEEccCCCCeE
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCG-NIVHHDVRSRDHKVALLQNHTQEVC 422 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg-~I~iwd~~~~~~~~~~~~~h~~~V~ 422 (609)
+|++++..+. |...|.+...+-.++. +|...|.-..+ ++.-++.|..|| .+-|+|.+++ .+..+...-+.|.
T Consensus 331 ~Gd~ia~VSR-GkaFi~~~~~~~~iqv--~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~--e~kr~e~~lg~I~ 405 (668)
T COG4946 331 NGDYIALVSR-GKAFIMRPWDGYSIQV--GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGG--EVKRIEKDLGNIE 405 (668)
T ss_pred CCcEEEEEec-CcEEEECCCCCeeEEc--CCCCceEEEEEccCCcceEEeccCCceEEEEecCCc--eEEEeeCCccceE
Confidence 5889988887 7788887765554443 46666766666 677899999999 8999999986 4667777788999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEE-eccCCCeEEEEECCCC
Q psy4876 423 GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASG-GGTADRHIYFWNVSSG 501 (609)
Q Consensus 423 ~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasg-gGs~Dg~I~iwd~~t~ 501 (609)
++..+++|++++++.....|.+.|+.++. ....-+...+-|+.++|||++.++..+- .|..-..|+++|+..+
T Consensus 406 av~vs~dGK~~vvaNdr~el~vididngn------v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~ 479 (668)
T COG4946 406 AVKVSPDGKKVVVANDRFELWVIDIDNGN------VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGG 479 (668)
T ss_pred EEEEcCCCcEEEEEcCceEEEEEEecCCC------eeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCC
Confidence 99999999999999988999999999983 3333334567899999999986554331 1234568999999998
Q ss_pred ceeEEEcCCCCeEEEEEcCCCCeEEE
Q psy4876 502 ACLDSIDTKSQVCALLWNSDYKELVS 527 (609)
Q Consensus 502 ~~~~~~~~~~~v~sl~~s~~g~~l~~ 527 (609)
+........+.-.+-+|.|++++|..
T Consensus 480 Kiy~vTT~ta~DfsPaFD~d~ryLYf 505 (668)
T COG4946 480 KIYDVTTPTAYDFSPAFDPDGRYLYF 505 (668)
T ss_pred eEEEecCCcccccCcccCCCCcEEEE
Confidence 87766554444555666666666654
No 251
>KOG0280|consensus
Probab=99.27 E-value=1e-09 Score=105.98 Aligned_cols=245 Identities=17% Similarity=0.185 Sum_probs=173.9
Q ss_pred CCCCeEEEEEcc---CCC-EEEEEeCCCeEEEEeCCCCeeEEEecCCC---C---ceEEEEe--cCCEEEEEecCCeEEE
Q psy4876 334 GNENVCSVAWIQ---EGY-MLGVGTSLGTVQLWDVSAKKKCRTMDGHD---V---RVGALAW--NTYILSSGSRCGNIVH 401 (609)
Q Consensus 334 h~~~V~~v~~sp---dg~-~Lasgs~dg~I~iwd~~~~~~~~~l~~h~---~---~V~~l~~--~~~~L~sgs~dg~I~i 401 (609)
....+..+.|.. +|. .|+.+...|.|.++..........+.+-. - ...++.| .+..++++..+|.+.+
T Consensus 68 dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~ 147 (339)
T KOG0280|consen 68 DTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISG 147 (339)
T ss_pred cccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEE
Confidence 456788888875 344 66777888999999877655555554422 1 2345556 3678899999999986
Q ss_pred EEcCCCC-eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceE-eecCCcccEEEEEEcCCC
Q psy4876 402 HDVRSRD-HKVALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIH-SLSRHQAAVKAIAWCPWS 478 (609)
Q Consensus 402 wd~~~~~-~~~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~-~~~~h~~~V~~l~~sp~~ 478 (609)
-+..... +.++..+.|.-++....|+. +.+++.+|+.|+.+..||++... ..+. ....|...|.+|.-+|..
T Consensus 148 v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~-----~~i~~n~kvH~~GV~SI~ss~~~ 222 (339)
T KOG0280|consen 148 VYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK-----TFIWHNSKVHTSGVVSIYSSPPK 222 (339)
T ss_pred EecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc-----ceeeecceeeecceEEEecCCCC
Confidence 5554431 23457889999999999986 55789999999999999999432 2333 255688999999999988
Q ss_pred CcEEEEEeccCCCeEEEEECC-CCceeEEEcCCCCeEEEEEcCCCC--eEEEEEecCCCeEEEEECCCC--c---eEEEE
Q psy4876 479 PNVLASGGGTADRHIYFWNVS-SGACLDSIDTKSQVCALLWNSDYK--ELVSAHGFAQNQLIIWKYPSL--V---KVAEL 550 (609)
Q Consensus 479 ~~llasggGs~Dg~I~iwd~~-t~~~~~~~~~~~~v~sl~~s~~g~--~l~~~sG~~dg~I~Iwd~~~~--~---~~~~l 550 (609)
+..+++| +.|..|++||++ .++++..-...+.|+.+.++|.-. .|+++ ..+-.+|.+.... + .....
T Consensus 223 ~~~I~TG--sYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~C---Mh~G~ki~~~~~~~~e~~~~~~s~ 297 (339)
T KOG0280|consen 223 PTYIATG--SYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAAC---MHNGAKILDSSDKVLEFQIVLPSD 297 (339)
T ss_pred CceEEEe--ccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHH---HhcCceEEEecccccchheeeecc
Confidence 8899997 599999999999 678888777789999999999754 22222 3455666665432 2 23334
Q ss_pred eCCCCCEEEEEEeCCCCEEEEEE-CCCCEE-EEEcCCCcc
Q psy4876 551 HGHSARVLNLAMSPDETTVLSAG-ADETLR-LWKIFEKVK 588 (609)
Q Consensus 551 ~~h~~~V~~l~~spdg~~L~s~s-~Dg~I~-iWdl~~~~~ 588 (609)
..|.+-+..-.|......|+|++ .|..++ +|-.-++..
T Consensus 298 ~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~~~ 337 (339)
T KOG0280|consen 298 KIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITGEP 337 (339)
T ss_pred ccccceeeccccccccceeeeeeccccceeeeeeeccCCc
Confidence 56777677777754455788865 477755 886655543
No 252
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.26 E-value=3.6e-08 Score=98.44 Aligned_cols=271 Identities=12% Similarity=0.145 Sum_probs=182.3
Q ss_pred CCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEeCC---CeEEEEeC
Q psy4876 288 GGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSL---GTVQLWDV 364 (609)
Q Consensus 288 dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~d---g~I~iwd~ 364 (609)
+..|++|++.+.. +.+..+..+.+.+.++-|+|+|++++|+++..+ |.|..|.+
T Consensus 15 s~gI~v~~ld~~~-----------------------g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~i 71 (346)
T COG2706 15 SQGIYVFNLDTKT-----------------------GELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRI 71 (346)
T ss_pred CCceEEEEEeCcc-----------------------cccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEE
Confidence 6789999998621 445455555577889999999999999987655 66777777
Q ss_pred CC--CeeEE--EecCCCCceEEEEe--cCCEEEEEe-cCCeEEEEEcCCCCeeE--EEEccCCCC----------eEEEE
Q psy4876 365 SA--KKKCR--TMDGHDVRVGALAW--NTYILSSGS-RCGNIVHHDVRSRDHKV--ALLQNHTQE----------VCGLK 425 (609)
Q Consensus 365 ~~--~~~~~--~l~~h~~~V~~l~~--~~~~L~sgs-~dg~I~iwd~~~~~~~~--~~~~~h~~~----------V~~l~ 425 (609)
+. |++.. ........-..++. ++.+|+++. ..|.|.++-++...... .....|.+. +....
T Consensus 72 D~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~ 151 (346)
T COG2706 72 DPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSAN 151 (346)
T ss_pred cCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceee
Confidence 64 44321 11112222255666 577777765 46789999887643221 122234444 88899
Q ss_pred EccCCCEEEEEeC-CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC--c
Q psy4876 426 WSPDGRYLASGGN-DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG--A 502 (609)
Q Consensus 426 ~spdg~~lasgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~--~ 502 (609)
+.|++++|++..- --.|.+|++..+.... .....+ .....-+.|.|+|+++...+.+ -.+++|-+|..... +
T Consensus 152 ~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~--~~~~~v-~~G~GPRHi~FHpn~k~aY~v~--EL~stV~v~~y~~~~g~ 226 (346)
T COG2706 152 FTPDGRYLVVPDLGTDRIFLYDLDDGKLTP--ADPAEV-KPGAGPRHIVFHPNGKYAYLVN--ELNSTVDVLEYNPAVGK 226 (346)
T ss_pred eCCCCCEEEEeecCCceEEEEEcccCcccc--cccccc-CCCCCcceEEEcCCCcEEEEEe--ccCCEEEEEEEcCCCce
Confidence 9999999998764 2369999999763221 111222 2344568999999998777776 38999999999863 2
Q ss_pred --eeEEE-------cCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC-ceEEEE---eCCCCCEEEEEEeCCCCEE
Q psy4876 503 --CLDSI-------DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL-VKVAEL---HGHSARVLNLAMSPDETTV 569 (609)
Q Consensus 503 --~~~~~-------~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~-~~~~~l---~~h~~~V~~l~~spdg~~L 569 (609)
.++.+ ........|..+++|++|+++-- ..+.|.+|.+... ..+..+ ..+...-.+..|++.|++|
T Consensus 227 ~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNR-g~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~L 305 (346)
T COG2706 227 FEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNR-GHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFL 305 (346)
T ss_pred EEEeeeeccCccccCCCCceeEEEECCCCCEEEEecC-CCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEE
Confidence 22222 23347889999999999998743 4558888887532 223222 2344446889999999999
Q ss_pred EEEECC-CCEEEEEcCCCc
Q psy4876 570 LSAGAD-ETLRLWKIFEKV 587 (609)
Q Consensus 570 ~s~s~D-g~I~iWdl~~~~ 587 (609)
+++..| ..|.+|.+....
T Consensus 306 iaa~q~sd~i~vf~~d~~T 324 (346)
T COG2706 306 IAANQKSDNITVFERDKET 324 (346)
T ss_pred EEEccCCCcEEEEEEcCCC
Confidence 998875 578888876543
No 253
>KOG1409|consensus
Probab=99.25 E-value=4.2e-10 Score=110.69 Aligned_cols=271 Identities=17% Similarity=0.271 Sum_probs=178.5
Q ss_pred CCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEeCCCeE
Q psy4876 280 FNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTV 359 (609)
Q Consensus 280 ~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I 359 (609)
+++++++.|.+++||--.+. ++.-+-....-..+++++++.++...|++|-.+|++
T Consensus 37 ~gv~~~s~drtvrv~lkrds------------------------~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtv 92 (404)
T KOG1409|consen 37 EGVISVSEDRTVRVWLKRDS------------------------GQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTV 92 (404)
T ss_pred CCeEEccccceeeeEEeccc------------------------cccCchhhhhCCCCceEeeeeccceEEEEEEecceE
Confidence 47999999999999965441 221111111145789999999999999999999999
Q ss_pred EEEeCC----CCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEE--------------------------------
Q psy4876 360 QLWDVS----AKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVH-------------------------------- 401 (609)
Q Consensus 360 ~iwd~~----~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~i-------------------------------- 401 (609)
.-+.+. .....+....|..+|..+-|+ ...+++.+.|..+.-
T Consensus 93 tefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd 172 (404)
T KOG1409|consen 93 TEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGD 172 (404)
T ss_pred EEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecc
Confidence 888664 334455666677777777773 345555554433321
Q ss_pred -------EEcCC-CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEE
Q psy4876 402 -------HDVRS-RDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473 (609)
Q Consensus 402 -------wd~~~-~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~ 473 (609)
-.+.. .-..+.++.+|.+.+.+++|.+....|++|..|..|.+||+-... .....+.+|...|..+.
T Consensus 173 ~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~-----g~~~el~gh~~kV~~l~ 247 (404)
T KOG1409|consen 173 HSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRK-----GTAYELQGHNDKVQALS 247 (404)
T ss_pred cccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCc-----ceeeeeccchhhhhhhh
Confidence 11111 113466778999999999999999999999999999999997653 45677888999999998
Q ss_pred EcCCCCcEEEEEeccCCCeEEEEECCCCceeE----------EEc--------------------C-----CCCeEEEEE
Q psy4876 474 WCPWSPNVLASGGGTADRHIYFWNVSSGACLD----------SID--------------------T-----KSQVCALLW 518 (609)
Q Consensus 474 ~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~----------~~~--------------------~-----~~~v~sl~~ 518 (609)
..+.-..+++.+ .||.|.+||+....... ... + ...++..+-
T Consensus 248 ~~~~t~~l~S~~---edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~ 324 (404)
T KOG1409|consen 248 YAQHTRQLISCG---EDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCS 324 (404)
T ss_pred hhhhheeeeecc---CCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccc
Confidence 887766666654 79999999997432110 000 0 011222222
Q ss_pred cCCCCeEEEEEecCCCeEEEEEC-------CCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 519 NSDYKELVSAHGFAQNQLIIWKY-------PSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 519 s~~g~~l~~~sG~~dg~I~Iwd~-------~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
+....+... | ..-.+++-|. .+..++..+..-...|+.+.+..+-.+|+|+|.|..|+|||+..
T Consensus 325 s~~~~~p~m--g-~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 325 SNRSSYPTM--G-FEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred cCccccccc--c-ceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence 222222222 2 1233444442 11233444433335689999988888999999999999999864
No 254
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.25 E-value=2.9e-09 Score=115.57 Aligned_cols=216 Identities=15% Similarity=0.129 Sum_probs=138.4
Q ss_pred eEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEec-CC--eEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCE
Q psy4876 358 TVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSR-CG--NIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRY 432 (609)
Q Consensus 358 ~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~-dg--~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 432 (609)
.|.++|..... .+.+..+...+....| ++..|+..+. ++ .|++||+.++.. ..+....+.....+|+|||+.
T Consensus 199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~--~~lt~~~g~~~~~~wSPDG~~ 275 (448)
T PRK04792 199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVR--EKVTSFPGINGAPRFSPDGKK 275 (448)
T ss_pred EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCe--EEecCCCCCcCCeeECCCCCE
Confidence 57777865443 3455566778888889 5777766543 33 588999987642 223222334457899999998
Q ss_pred EEE-EeCCCc--EEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcC
Q psy4876 433 LAS-GGNDNL--LNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT 509 (609)
Q Consensus 433 las-gs~Dg~--I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~ 509 (609)
|+. .+.++. |++||+.++ ....+..+.......+|+|++..++++........|+++|+.+++.......
T Consensus 276 La~~~~~~g~~~Iy~~dl~tg-------~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~ 348 (448)
T PRK04792 276 LALVLSKDGQPEIYVVDIATK-------ALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFE 348 (448)
T ss_pred EEEEEeCCCCeEEEEEECCCC-------CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecC
Confidence 875 455564 888888766 2344555555667889999998887765311235678888887775443222
Q ss_pred CCCeEEEEEcCCCCeEEEEEecCCC--eEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC-CC--EEEEEcC
Q psy4876 510 KSQVCALLWNSDYKELVSAHGFAQN--QLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD-ET--LRLWKIF 584 (609)
Q Consensus 510 ~~~v~sl~~s~~g~~l~~~sG~~dg--~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D-g~--I~iWdl~ 584 (609)
........|+|+|++++.++. .++ .|.++|+.++... .+... .......|+|||+.|+..+.+ +. |.+++..
T Consensus 349 g~~~~~~~~SpDG~~l~~~~~-~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~ 425 (448)
T PRK04792 349 GEQNLGGSITPDGRSMIMVNR-TNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSID 425 (448)
T ss_pred CCCCcCeeECCCCCEEEEEEe-cCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 233456799999999988653 344 4666787777543 33222 122345899999988766543 33 6666764
Q ss_pred CC
Q psy4876 585 EK 586 (609)
Q Consensus 585 ~~ 586 (609)
..
T Consensus 426 G~ 427 (448)
T PRK04792 426 GR 427 (448)
T ss_pred CC
Confidence 43
No 255
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.24 E-value=3.7e-08 Score=101.81 Aligned_cols=266 Identities=11% Similarity=0.083 Sum_probs=162.5
Q ss_pred CeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEeC----------CCe
Q psy4876 289 GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTS----------LGT 358 (609)
Q Consensus 289 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~----------dg~ 358 (609)
+.|++.|..+ .+........ ..-..+ ++|||+.|+++.. +..
T Consensus 27 ~~v~ViD~~~-------------------------~~v~g~i~~G--~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~ 78 (352)
T TIGR02658 27 TQVYTIDGEA-------------------------GRVLGMTDGG--FLPNPV-VASDGSFFAHASTVYSRIARGKRTDY 78 (352)
T ss_pred ceEEEEECCC-------------------------CEEEEEEEcc--CCCcee-ECCCCCEEEEEeccccccccCCCCCE
Confidence 7899999987 4443333332 222234 9999998888766 688
Q ss_pred EEEEeCCCCeeEEEecCCCC-c--------eEEEEecCCEEEEEe-c-CCeEEEEEcCCCCeeEEEEccCCCCeEEEEEc
Q psy4876 359 VQLWDVSAKKKCRTMDGHDV-R--------VGALAWNTYILSSGS-R-CGNIVHHDVRSRDHKVALLQNHTQEVCGLKWS 427 (609)
Q Consensus 359 I~iwd~~~~~~~~~l~~h~~-~--------V~~l~~~~~~L~sgs-~-dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 427 (609)
|.|||+.+.+.+..+..... + ...+.-+|++|+... . +..|.+.|+.++. .+..+.- .+...-...+
T Consensus 79 V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~k-vv~ei~v-p~~~~vy~t~ 156 (352)
T TIGR02658 79 VEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKA-FVRMMDV-PDCYHIFPTA 156 (352)
T ss_pred EEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCc-EEEEEeC-CCCcEEEEec
Confidence 99999999999988874222 1 334444788888765 3 6889999999874 5544442 1222222222
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEE-EEEEcC-CCCcEEEEEeccCCCeEEEEECCCC----
Q psy4876 428 PDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVK-AIAWCP-WSPNVLASGGGTADRHIYFWNVSSG---- 501 (609)
Q Consensus 428 pdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~-~l~~sp-~~~~llasggGs~Dg~I~iwd~~t~---- 501 (609)
.+..+ + -+.||......+...... .......+.....++. .-.|.+ ++..++++ ..|.|.+.|+...
T Consensus 157 e~~~~-~-~~~Dg~~~~v~~d~~g~~-~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs----~eG~V~~id~~~~~~~~ 229 (352)
T TIGR02658 157 NDTFF-M-HCRDGSLAKVGYGTKGNP-KIKPTEVFHPEDEYLINHPAYSNKSGRLVWPT----YTGKIFQIDLSSGDAKF 229 (352)
T ss_pred CCccE-E-EeecCceEEEEecCCCce-EEeeeeeecCCccccccCCceEcCCCcEEEEe----cCCeEEEEecCCCccee
Confidence 22222 1 123444444333322100 0001111111000000 003455 77666665 4599999996443
Q ss_pred -ceeEEEcC--------CCCeEEEEEcCCCCeEEEE-Ee-------cCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeC
Q psy4876 502 -ACLDSIDT--------KSQVCALLWNSDYKELVSA-HG-------FAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSP 564 (609)
Q Consensus 502 -~~~~~~~~--------~~~v~sl~~s~~g~~l~~~-sG-------~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~sp 564 (609)
.....+.. ...+.-++++++++.++++ ++ ...+.|.++|..+++.+..+.. ...+..++++|
T Consensus 230 ~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~ 308 (352)
T TIGR02658 230 LPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQ 308 (352)
T ss_pred cceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECC
Confidence 22332221 1233449999999999984 32 1236899999999999998864 35789999999
Q ss_pred CCC-EEEEEE-CCCCEEEEEcCCCccchhh
Q psy4876 565 DET-TVLSAG-ADETLRLWKIFEKVKSKKK 592 (609)
Q Consensus 565 dg~-~L~s~s-~Dg~I~iWdl~~~~~~~k~ 592 (609)
||+ +|++.. .++.|.+.|..+.+..+..
T Consensus 309 Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 309 DAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 999 888666 5789999999988776654
No 256
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.23 E-value=6.5e-08 Score=101.61 Aligned_cols=260 Identities=15% Similarity=0.179 Sum_probs=166.8
Q ss_pred EEecCCC--eEEEEc----CCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 275 IDWSHFN--VLAVAL----GGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 275 l~wsp~~--lla~s~----dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
|+++|++ +.++.. ++.|..|++... .+.+..+.+.. .....+.++++|++
T Consensus 42 l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~-----------------------~g~L~~~~~~~~~g~~p~~i~~~~~g 98 (345)
T PF10282_consen 42 LAVSPDGRRLYVVNEGSGDSGGVSSYRIDPD-----------------------TGTLTLLNSVPSGGSSPCHIAVDPDG 98 (345)
T ss_dssp EEE-TTSSEEEEEETTSSTTTEEEEEEEETT-----------------------TTEEEEEEEEEESSSCEEEEEECTTS
T ss_pred EEEEeCCCEEEEEEccccCCCCEEEEEECCC-----------------------cceeEEeeeeccCCCCcEEEEEecCC
Confidence 7788875 444444 468888877651 04556666665 56777899999999
Q ss_pred CEEEEEe-CCCeEEEEeCCC-CeeEEE---ec----------CCCCceEEEEe--cCCEEEEEec-CCeEEEEEcCCCCe
Q psy4876 348 YMLGVGT-SLGTVQLWDVSA-KKKCRT---MD----------GHDVRVGALAW--NTYILSSGSR-CGNIVHHDVRSRDH 409 (609)
Q Consensus 348 ~~Lasgs-~dg~I~iwd~~~-~~~~~~---l~----------~h~~~V~~l~~--~~~~L~sgs~-dg~I~iwd~~~~~~ 409 (609)
++|+++. .+|.|.++++.. +..... +. .......++.| +++++++... ...|.+|++.....
T Consensus 99 ~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~ 178 (345)
T PF10282_consen 99 RFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTG 178 (345)
T ss_dssp SEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-
T ss_pred CEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCc
Confidence 9999886 489999999987 333222 21 12345677888 4677766543 45799999976542
Q ss_pred eE---EEE-ccCCCCeEEEEEccCCCEEEEEe-CCCcEEEEeCCCCCCCCCccceEeecC------CcccEEEEEEcCCC
Q psy4876 410 KV---ALL-QNHTQEVCGLKWSPDGRYLASGG-NDNLLNIWSGVPGQHTFSTQPIHSLSR------HQAAVKAIAWCPWS 478 (609)
Q Consensus 410 ~~---~~~-~~h~~~V~~l~~spdg~~lasgs-~Dg~I~iwd~~~~~~~~~~~~~~~~~~------h~~~V~~l~~sp~~ 478 (609)
.+ ..+ .........++|+|+|+++.+.. .++.|.++++..... ....+..+.. .......|+++|+|
T Consensus 179 ~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~ispdg 256 (345)
T PF10282_consen 179 KLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDG--SLTEIQTISTLPEGFTGENAPAEIAISPDG 256 (345)
T ss_dssp TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTT--EEEEEEEEESCETTSCSSSSEEEEEE-TTS
T ss_pred eEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCC--ceeEEEEeeeccccccccCCceeEEEecCC
Confidence 12 122 23456688999999999876665 478899999883211 1122222211 12257899999999
Q ss_pred CcEEEEEeccCCCeEEEEECC--CCce--eEEEcC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC--CCCceEEEEe
Q psy4876 479 PNVLASGGGTADRHIYFWNVS--SGAC--LDSIDT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKY--PSLVKVAELH 551 (609)
Q Consensus 479 ~~llasggGs~Dg~I~iwd~~--t~~~--~~~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~--~~~~~~~~l~ 551 (609)
++|+++.. ..+.|.+|++. ++.. +..+.. ......++++|+|++|+++. ..++.|.+|++ .+|.....-.
T Consensus 257 ~~lyvsnr--~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~-~~s~~v~vf~~d~~tG~l~~~~~ 333 (345)
T PF10282_consen 257 RFLYVSNR--GSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVAN-QDSNTVSVFDIDPDTGKLTPVGS 333 (345)
T ss_dssp SEEEEEEC--TTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEE-TTTTEEEEEEEETTTTEEEEEEE
T ss_pred CEEEEEec--cCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEe-cCCCeEEEEEEeCCCCcEEEecc
Confidence 98888874 58899999994 3443 334444 34689999999999999874 47888999976 4555433221
Q ss_pred -CCCCCEEEEEE
Q psy4876 552 -GHSARVLNLAM 562 (609)
Q Consensus 552 -~h~~~V~~l~~ 562 (609)
..-....||.|
T Consensus 334 ~~~~~~p~ci~f 345 (345)
T PF10282_consen 334 SVPIPSPVCIVF 345 (345)
T ss_dssp EEESSSEEEEEE
T ss_pred cccCCCCEEEeC
Confidence 12344566665
No 257
>KOG4547|consensus
Probab=99.23 E-value=2.3e-09 Score=112.58 Aligned_cols=143 Identities=20% Similarity=0.267 Sum_probs=124.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEec--CCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMD--GHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVC 422 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~--~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 422 (609)
...++-|...|.|.+|++..++....+. .|.+.|.++.|+ -..|.+++.|+.+..|+.... ..+.........+.
T Consensus 70 t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~-~~~~~~~~~~~~~~ 148 (541)
T KOG4547|consen 70 TSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEK-VIIRIWKEQKPLVS 148 (541)
T ss_pred ceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccc-eeeeeeccCCCccc
Confidence 3578889999999999999999887776 599999999994 578999999999999999986 47778888888999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCC-----CCcEEEEEeccCCCeEEEEE
Q psy4876 423 GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPW-----SPNVLASGGGTADRHIYFWN 497 (609)
Q Consensus 423 ~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~-----~~~llasggGs~Dg~I~iwd 497 (609)
+++.+|||..+++++ +.|.+||+++. +.+..|.+|.++|.++.|--. |.++|.+.. .+.-|.+|-
T Consensus 149 sl~is~D~~~l~~as--~~ik~~~~~~k------evv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~--~~r~i~~w~ 218 (541)
T KOG4547|consen 149 SLCISPDGKILLTAS--RQIKVLDIETK------EVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAA--AERGITVWV 218 (541)
T ss_pred eEEEcCCCCEEEecc--ceEEEEEccCc------eEEEEecCCCcceEEEEEEEeccccccceeeeccc--cccceeEEE
Confidence 999999999999987 68999999998 899999999999999999876 677777764 567777776
Q ss_pred CCC
Q psy4876 498 VSS 500 (609)
Q Consensus 498 ~~t 500 (609)
+..
T Consensus 219 v~~ 221 (541)
T KOG4547|consen 219 VEK 221 (541)
T ss_pred EEc
Confidence 654
No 258
>KOG2041|consensus
Probab=99.22 E-value=1.4e-09 Score=115.57 Aligned_cols=296 Identities=15% Similarity=0.202 Sum_probs=197.2
Q ss_pred cCCceeEEEEEecCC-CeEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEE
Q psy4876 266 IQNDYYLNLIDWSHF-NVLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVA 342 (609)
Q Consensus 266 ~~~~~~v~~l~wsp~-~lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~ 342 (609)
+.+...++|++|+.. |.+| +|.||.+++..+.+..... .. ..+.....+..-.+++ |.+.|.-+.
T Consensus 11 iPnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~---------~~---~glaa~snLsmNQtLeGH~~sV~vvT 78 (1189)
T KOG2041|consen 11 IPNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDL---------NK---SGLAAASNLSMNQTLEGHNASVMVVT 78 (1189)
T ss_pred CCCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcc---------cc---cccccccccchhhhhccCcceEEEEE
Confidence 445677999999986 5555 7889999999887732111 10 0011112333445666 999999999
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCeeEEEec--CCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCC
Q psy4876 343 WIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMD--GHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHT 418 (609)
Q Consensus 343 ~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~--~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~ 418 (609)
|+.+.+.|-+...+|.|.||-+-.+.-...+. ...+.|.+++| +|..++....||.|.+=.++... +.-..-..
T Consensus 79 WNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNR--IwgKeLkg 156 (1189)
T KOG2041|consen 79 WNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNR--IWGKELKG 156 (1189)
T ss_pred eccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccce--ecchhcch
Confidence 99999999999999999999998776544433 35577899999 58999999999999888776542 22111122
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCC-CCccceE----eecCCcccEEEEEEc--------CCCCcEEEEE
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHT-FSTQPIH----SLSRHQAAVKAIAWC--------PWSPNVLASG 485 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~-~~~~~~~----~~~~h~~~V~~l~~s--------p~~~~llasg 485 (609)
.....+.|++|.+.++.+-..|.+++||....-.. ....+.. .+......|-.+.|. |+.+.+ +++
T Consensus 157 ~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~l-avc 235 (1189)
T KOG2041|consen 157 QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRL-AVC 235 (1189)
T ss_pred heccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEE-EEE
Confidence 33457899999998888888899999997643100 0001111 111122235566664 355444 444
Q ss_pred eccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEec-------CCCeEEEEECCCCceEEEEeCCCCCEE
Q psy4876 486 GGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGF-------AQNQLIIWKYPSLVKVAELHGHSARVL 558 (609)
Q Consensus 486 gGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~-------~dg~I~Iwd~~~~~~~~~l~~h~~~V~ 558 (609)
...|.+.|-.-.+......++.+-.+..+.|+++|..|+++... ..+.|++|. +-|+.+..++.....|+
T Consensus 236 --y~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i~gtlkvpg~~It 312 (1189)
T KOG2041|consen 236 --YANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHIVGTLKVPGSCIT 312 (1189)
T ss_pred --EcCceehhhhhcCCCCCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEec-cchhheEEEecCCceee
Confidence 36788887766655555666777789999999999999987321 123566555 56777888887778899
Q ss_pred EEEEeCCCCEEEEEECCCCEEE
Q psy4876 559 NLAMSPDETTVLSAGADETLRL 580 (609)
Q Consensus 559 ~l~~spdg~~L~s~s~Dg~I~i 580 (609)
+++|-..|-.++.+ .|+.|.+
T Consensus 313 ~lsWEg~gLriA~A-vdsfiyf 333 (1189)
T KOG2041|consen 313 GLSWEGTGLRIAIA-VDSFIYF 333 (1189)
T ss_pred eeEEcCCceEEEEE-ecceEEE
Confidence 99887666555443 3444443
No 259
>KOG2314|consensus
Probab=99.22 E-value=3.1e-09 Score=110.38 Aligned_cols=282 Identities=16% Similarity=0.223 Sum_probs=174.6
Q ss_pred ceeEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 269 DYYLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 269 ~~~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
.|.=+-+.|||-| .|+.-.-..|.+|--.+ ...+..+.| -.|.-+.|||+.
T Consensus 210 nWTetyv~wSP~GTYL~t~Hk~GI~lWGG~~---------------------------f~r~~RF~H-p~Vq~idfSP~E 261 (698)
T KOG2314|consen 210 NWTETYVRWSPKGTYLVTFHKQGIALWGGES---------------------------FDRIQRFYH-PGVQFIDFSPNE 261 (698)
T ss_pred cceeeeEEecCCceEEEEEeccceeeecCcc---------------------------HHHHHhccC-CCceeeecCCcc
Confidence 4445668889887 55555566788886543 445556655 458899999999
Q ss_pred CEEEEEeC-----------CCeEEEEeCCCCeeEEEecCC--CCceE-EEEe--cCCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 348 YMLGVGTS-----------LGTVQLWDVSAKKKCRTMDGH--DVRVG-ALAW--NTYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 348 ~~Lasgs~-----------dg~I~iwd~~~~~~~~~l~~h--~~~V~-~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
+||++-+. ...++|||+.+|...+.+... ...+. -+.| |+.+++.-.. ..|.||+..... .+
T Consensus 262 kYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~-ll 339 (698)
T KOG2314|consen 262 KYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFM-LL 339 (698)
T ss_pred ceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCcee-ee
Confidence 99998542 247999999999988888752 22222 2344 6777776655 467787765421 11
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeC-----------------------------------------------------
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGN----------------------------------------------------- 438 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~----------------------------------------------------- 438 (609)
..-.-.-..|....|+|.+++||.=..
T Consensus 340 d~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~ 419 (698)
T KOG2314|consen 340 DKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSK 419 (698)
T ss_pred cccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeecccc
Confidence 111111123444445554444433110
Q ss_pred ----CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC-Cc---eeEEEcCC
Q psy4876 439 ----DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS-GA---CLDSIDTK 510 (609)
Q Consensus 439 ----Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t-~~---~~~~~~~~ 510 (609)
-..+.|+.++..+ .++..+. -...|...+|-|.|..+.+..|.....++.+|-+.+ .. ++..++.
T Consensus 420 ~~g~f~n~eIfrireKd-----Ipve~ve-lke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk- 492 (698)
T KOG2314|consen 420 VKGQFSNLEIFRIREKD-----IPVEVVE-LKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK- 492 (698)
T ss_pred ccceEeeEEEEEeeccC-----CCceeee-cchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc-
Confidence 0012233332221 1222222 345678899999998877666556678899998873 22 2333333
Q ss_pred CCeEEEEEcCCCCeEEEEE-ecCCCeEEEEECCCCceEEE-EeCCCCCEEEEEEeCCCCEEEEEEC------CCCEEEEE
Q psy4876 511 SQVCALLWNSDYKELVSAH-GFAQNQLIIWKYPSLVKVAE-LHGHSARVLNLAMSPDETTVLSAGA------DETLRLWK 582 (609)
Q Consensus 511 ~~v~sl~~s~~g~~l~~~s-G~~dg~I~Iwd~~~~~~~~~-l~~h~~~V~~l~~spdg~~L~s~s~------Dg~I~iWd 582 (609)
.....+.|+|.|++++++. ++..|.+.++|..-...... ...| ...+.+.|.|.|+|+++++. |.--+||+
T Consensus 493 ~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~t 571 (698)
T KOG2314|consen 493 KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFT 571 (698)
T ss_pred cccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc-cccccceECCCCCEEEEeeehhhhccccceEEEE
Confidence 5678999999999988753 34688999999874222111 1223 34678999999999999875 66778998
Q ss_pred cCCCcc
Q psy4876 583 IFEKVK 588 (609)
Q Consensus 583 l~~~~~ 588 (609)
+.+...
T Consensus 572 fqGrll 577 (698)
T KOG2314|consen 572 FQGRLL 577 (698)
T ss_pred eecHHH
Confidence 876543
No 260
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.21 E-value=2.6e-08 Score=102.96 Aligned_cols=235 Identities=13% Similarity=0.111 Sum_probs=152.6
Q ss_pred cCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec------CCCCeEEEEEccCCCEEEEEe-C-CCe
Q psy4876 287 LGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE------GNENVCSVAWIQEGYMLGVGT-S-LGT 358 (609)
Q Consensus 287 ~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------h~~~V~~v~~spdg~~Lasgs-~-dg~ 358 (609)
.+..|.+||..+ .+...-..+. .......++++|||++|++.. . +..
T Consensus 75 ~~d~V~v~D~~t-------------------------~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~ 129 (352)
T TIGR02658 75 RTDYVEVIDPQT-------------------------HLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPA 129 (352)
T ss_pred CCCEEEEEECcc-------------------------CcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCE
Confidence 578999999988 4433222221 122344789999999999876 3 689
Q ss_pred EEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeE-E---EEccCCCCeE-EEEEcc-CCCE
Q psy4876 359 VQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKV-A---LLQNHTQEVC-GLKWSP-DGRY 432 (609)
Q Consensus 359 I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~-~---~~~~h~~~V~-~l~~sp-dg~~ 432 (609)
|.|.|+.+++.+.++.--. ...-+......+.+-+.||......+....... . .+......+. .-.|.+ +|++
T Consensus 130 V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~ 208 (352)
T TIGR02658 130 VGVVDLEGKAFVRMMDVPD-CYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRL 208 (352)
T ss_pred EEEEECCCCcEEEEEeCCC-CcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcE
Confidence 9999999999999887532 222223333333344556666554444332211 1 1111000000 003455 8887
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCCccceEeecC-------CcccEEEEEEcCCCCcEEEEEec-------cCCCeEEEEEC
Q psy4876 433 LASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR-------HQAAVKAIAWCPWSPNVLASGGG-------TADRHIYFWNV 498 (609)
Q Consensus 433 lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~-------h~~~V~~l~~sp~~~~llasggG-------s~Dg~I~iwd~ 498 (609)
+.+... |.|++.|+....... ......+.. ..+.+.-++++++++.+++...+ ...+.|.++|.
T Consensus 209 ~~vs~e-G~V~~id~~~~~~~~-~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~ 286 (352)
T TIGR02658 209 VWPTYT-GKIFQIDLSSGDAKF-LPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDA 286 (352)
T ss_pred EEEecC-CeEEEEecCCCccee-cceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEEC
Confidence 777666 999999975542211 122222211 23344559999999988874311 11268999999
Q ss_pred CCCceeEEEcCCCCeEEEEEcCCCC-eEEEEEecCCCeEEEEECCCCceEEEE
Q psy4876 499 SSGACLDSIDTKSQVCALLWNSDYK-ELVSAHGFAQNQLIIWKYPSLVKVAEL 550 (609)
Q Consensus 499 ~t~~~~~~~~~~~~v~sl~~s~~g~-~l~~~sG~~dg~I~Iwd~~~~~~~~~l 550 (609)
.+++.+..+.....+..+++++|++ .|+++.+ .++.|.++|..+++.+..+
T Consensus 287 ~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~-~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 287 KTGKRLRKIELGHEIDSINVSQDAKPLLYALST-GDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCCeEEEEEeCCCceeeEEECCCCCeEEEEeCC-CCCcEEEEECcCCeEEeee
Confidence 9999999999999999999999999 6666543 6889999999999999887
No 261
>KOG1912|consensus
Probab=99.20 E-value=1.2e-09 Score=117.10 Aligned_cols=283 Identities=15% Similarity=0.202 Sum_probs=194.1
Q ss_pred EEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC---
Q psy4876 272 LNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG--- 347 (609)
Q Consensus 272 v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg--- 347 (609)
.++++|+|.|++|.|....|.+-|..+ .+.+..++ |...|+.|.|.|..
T Consensus 18 ~~A~Dw~~~GLiAygshslV~VVDs~s---------------------------~q~iqsie~h~s~V~~VrWap~~~p~ 70 (1062)
T KOG1912|consen 18 RNAADWSPSGLIAYGSHSLVSVVDSRS---------------------------LQLIQSIELHQSAVTSVRWAPAPSPR 70 (1062)
T ss_pred ccccccCccceEEEecCceEEEEehhh---------------------------hhhhhccccCccceeEEEeccCCCch
Confidence 578999999999999999999999865 45566666 89999999998731
Q ss_pred ---------CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-----c-CCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 348 ---------YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-----N-TYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 348 ---------~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-----~-~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
-.||++...|.|.|||...+..+..+..|...+..++| + .++|++-.....|.+|+..+++ ...
T Consensus 71 ~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~-k~W 149 (1062)
T KOG1912|consen 71 DLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGE-KFW 149 (1062)
T ss_pred hccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCc-eee
Confidence 36778888899999999999989999999999999999 2 3678888888899999999985 555
Q ss_pred EEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCC-CCccceEeecCCcc-----------------------
Q psy4876 413 LLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHT-FSTQPIHSLSRHQA----------------------- 467 (609)
Q Consensus 413 ~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~-~~~~~~~~~~~h~~----------------------- 467 (609)
..........|+.+.| |.+.|..-+..|.|.+-+.-..... ...+..+.-..|..
T Consensus 150 k~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~f 229 (1062)
T KOG1912|consen 150 KYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYF 229 (1062)
T ss_pred ccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhH
Confidence 5544445677799999 7777777777788877765432211 11122222222221
Q ss_pred --cEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCC--CCeEEEEEecCCCeEEEEECC
Q psy4876 468 --AVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSD--YKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 468 --~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~--g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
..-.++|+|.-++++... ..+.+.++|++-..++..+.... .+.-+.|-|+ ...|++.+ .+|.+.||--+
T Consensus 230 ity~a~faf~p~~rn~lfi~---~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH--~nG~ltirvrk 304 (1062)
T KOG1912|consen 230 ITYCAQFAFSPHWRNILFIT---FPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLH--SNGRLTIRVRK 304 (1062)
T ss_pred HHHHHhhhcChhhhceEEEE---eccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEe--cCCeEEEEEee
Confidence 012356788766666654 68999999999888888776443 3444555555 45566655 89999999754
Q ss_pred CC----------------ceEEEEeC-CCCCEEEEEEeCC-CCEEEEEECCCCEEEEEcCCCc
Q psy4876 543 SL----------------VKVAELHG-HSARVLNLAMSPD-ETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 543 ~~----------------~~~~~l~~-h~~~V~~l~~spd-g~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
.. +.+..+.. .+-.+......|. ...++.--.+|.+.+|.+.++.
T Consensus 305 ~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~r 367 (1062)
T KOG1912|consen 305 EEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGR 367 (1062)
T ss_pred ccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCC
Confidence 31 11111111 1112222333443 3445555567889999998644
No 262
>KOG0974|consensus
Probab=99.20 E-value=4.7e-10 Score=124.20 Aligned_cols=193 Identities=19% Similarity=0.249 Sum_probs=149.9
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCc------eEEEEecCCEEEEEecCCeEEEEEcCCCCe
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVR------VGALAWNTYILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~------V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
+.|....+..+...++.++.+..+.+||...+.....+...... +...+++.-++++|+.-+.|.+|+.....
T Consensus 88 ~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn- 166 (967)
T KOG0974|consen 88 DWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDN- 166 (967)
T ss_pred ccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccC-
Confidence 44555555566788999999999999999877666665532211 11122245789999999999999998443
Q ss_pred eEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 410 KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
.-..+.+|.+.|..+.|+-||.++++.++|.++++|++++.. .......+|.+.|..++|+|+ .+++++ .
T Consensus 167 ~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~-----~~~~~~fgHsaRvw~~~~~~n---~i~t~g--e 236 (967)
T KOG0974|consen 167 KPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSRE-----VLGCTGFGHSARVWACCFLPN---RIITVG--E 236 (967)
T ss_pred CcceecccCCceEEEEEccCCcEEEEEecCcceeeeeccccc-----ccCcccccccceeEEEEeccc---eeEEec--c
Confidence 333688999999999999999999999999999999999884 223466789999999999996 566654 8
Q ss_pred CCeEEEEECCCCceeEEEcCC--CCeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 490 DRHIYFWNVSSGACLDSIDTK--SQVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 490 Dg~I~iwd~~t~~~~~~~~~~--~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
|.+.++|+.. ++.+..++.+ ..+..++..++...+++ +..|+.+++||+.
T Consensus 237 dctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT--~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 237 DCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVT--GGNDSTLKLWDLN 288 (967)
T ss_pred ceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEe--eccCcchhhhhhh
Confidence 9999999654 4555566655 37999999998888888 5589999999974
No 263
>KOG4547|consensus
Probab=99.20 E-value=3.6e-09 Score=111.12 Aligned_cols=186 Identities=16% Similarity=0.195 Sum_probs=149.3
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCeeEEEecC---CCCceEEEEec----------------------CCEEEEEecCCeE
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVSAKKKCRTMDG---HDVRVGALAWN----------------------TYILSSGSRCGNI 399 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~---h~~~V~~l~~~----------------------~~~L~sgs~dg~I 399 (609)
|.+.++|....||.++|||...++....+.. -.+...+..|. ...++-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 4458999999999999999999888777653 23445555551 2467788889999
Q ss_pred EEEEcCCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCC
Q psy4876 400 VHHDVRSRDHKVALL--QNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPW 477 (609)
Q Consensus 400 ~iwd~~~~~~~~~~~--~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~ 477 (609)
.+|++..++ ....+ ..|.+.|.++.++.+-..|.+++.|+.+..|+.... ..+..+......+.+++.+||
T Consensus 83 ~~ys~~~g~-it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~------~~~~~~~~~~~~~~sl~is~D 155 (541)
T KOG4547|consen 83 LLYSVAGGE-ITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEK------VIIRIWKEQKPLVSSLCISPD 155 (541)
T ss_pred EEEEecCCe-EEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccc------eeeeeeccCCCccceEEEcCC
Confidence 999999875 33333 479999999999999889999999999999999987 677888888888999999999
Q ss_pred CCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC-CeEEEEEcCC-----CCeEEEEEecCCCeEEEEECCC
Q psy4876 478 SPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS-QVCALLWNSD-----YKELVSAHGFAQNQLIIWKYPS 543 (609)
Q Consensus 478 ~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~-~v~sl~~s~~-----g~~l~~~sG~~dg~I~Iwd~~~ 543 (609)
+. +++++ .+.|++||+.+++.+..|.+|. .|.++.|... |.++++..+ .+..+.+|-...
T Consensus 156 ~~-~l~~a----s~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~-~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 156 GK-ILLTA----SRQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAA-AERGITVWVVEK 221 (541)
T ss_pred CC-EEEec----cceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccc-cccceeEEEEEc
Confidence 75 55554 6899999999999999999875 8999999877 788877543 455677776543
No 264
>PF08145 BOP1NT: BOP1NT (NUC169) domain; InterPro: IPR012953 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This N-terminal domain is found in BOP1-like WD40 proteins. Bop1 is a nucleolar protein involved in rRNA processing, thereby controlling the cell cycle []. It is required for the maturation of the 25S and 5.8S ribosomal RNAs. It may serve as an essential factor in ribosome formation that coordinates processing of the spacer regions in pre-rRNA. The Pes1-Bop1 complex has several components: BOP1, GRWD1, PES1, ORC6L, and RPL3 and is involved in ribosome biogenesis and altered chromosome segregation. The overexpression of BOP1 increases the percentage of multipolar spindles in human cells. Deregulation of the BOP1 pathway may contribute to colorectal tumourigenesis in humans []. Elevated levels of Bop1 induces Bop1/WDR12 and Bop1/Pes1 subcomplexes and the assembly and integrity of the PeBoW complex is highly sensitive to changes in Bop1 protein levels []. Nop7p-Erb1p-Ytm1p, found in yeast, is potentially the homologous complex of Pes1-Bop1-WDR12 as it is involved in the control of ribosome biogenesis and S phase entry. The integrity of the PeBoW complex is required for ribosome biogenesis and cell proliferation in mammalian cells []. In Giardia, the species specific cytoskeleton protein, beta-giardin, interacts with Bop1 []. ; GO: 0006364 rRNA processing, 0005634 nucleus
Probab=99.16 E-value=1e-12 Score=126.43 Aligned_cols=92 Identities=24% Similarity=0.414 Sum_probs=78.8
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCccccccccccCCCC--CCCCccHHHHHHHHHhHhcCCCCCCceEEeecCCCCCC
Q psy4876 89 NPNTPSAKSKTPSGGDRYIPNRSAIDTELSHYLLTRDENM--EDLSPSEREKRKAMSELVHGKDIQKSRVLAFQNKAPPP 166 (609)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (609)
...-||||.++|+|.++||| ++|||+|++|.. +.++|++|+ ..++++++..++ +|++|. .+.
T Consensus 155 ~~~ipAPK~~LPgh~eSYNP--------P~EYL~~~~E~~~w~~~~pedR~-~~fiP~k~~sLR----~Vp~Y~---~~i 218 (260)
T PF08145_consen 155 PMHIPAPKLKLPGHAESYNP--------PPEYLPTEEEKKEWEEMDPEDRK-KNFIPQKFDSLR----KVPAYE---NFI 218 (260)
T ss_pred CCCCCCCCCCCCCCccccCC--------chHhccCHHHHHHHHhcCchhcc-ccccchhhhhhh----ccchHH---HHH
Confidence 44489999999999999999 999999998877 888998888 479999999988 999999 566
Q ss_pred CCCccchhhhhhhccccCCccceeeeeeeecccchhhhhhhhhhHHhhhhhhheee
Q psy4876 167 PDGYQNSLKVALNSAITSSPEMKIWKISVHQNVKSVKLCQNLFMERIFKSLEYLLF 222 (609)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~e~~~~~~~~~~~ 222 (609)
.|+|++||+ || ||++....+.......++.
T Consensus 219 ~ErFeRCLD-LY-------------------------LcPR~~k~rlnidPesLlP 248 (260)
T PF08145_consen 219 KERFERCLD-LY-------------------------LCPRVRKKRLNIDPESLLP 248 (260)
T ss_pred HHHHHHhhh-hh-------------------------cCcHhhcccCCCCHHHhCC
Confidence 899999999 99 8888876666666665554
No 265
>KOG0280|consensus
Probab=99.13 E-value=4.6e-09 Score=101.57 Aligned_cols=196 Identities=17% Similarity=0.171 Sum_probs=137.9
Q ss_pred eEEEEEccCCCEEEEEeCCCeEEEEeCCCCee--EEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 338 VCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKK--CRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 338 V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~--~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
..++.|++.+..++++..+|.+.+-+...... ++..+.|.-.++...| +++++++|+.||.+..||++.....+.
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~ 203 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW 203 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence 56788999999999999999999666555443 4478899999999999 479999999999999999995544444
Q ss_pred E-EccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcE-EEEEeccC
Q psy4876 413 L-LQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNV-LASGGGTA 489 (609)
Q Consensus 413 ~-~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l-lasggGs~ 489 (609)
. .+-|...|++|.-+| .+.++++|+.|-.|++||.++.. +++..-. -.+.|..+.++|.-... ++++ .
T Consensus 204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~-----kPl~~~~-v~GGVWRi~~~p~~~~~lL~~C---M 274 (339)
T KOG0280|consen 204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMG-----KPLFKAK-VGGGVWRIKHHPEIFHRLLAAC---M 274 (339)
T ss_pred ecceeeecceEEEecCCCCCceEEEeccccceeeeehhccc-----CccccCc-cccceEEEEecchhhhHHHHHH---H
Confidence 3 567899999999887 67899999999999999999653 4554433 34789999999975433 3333 4
Q ss_pred CCeEEEEECCCCcee--EEEcC----CCCeEEEEEcCCCCeEEEEEecCCCeEE-EEECCC
Q psy4876 490 DRHIYFWNVSSGACL--DSIDT----KSQVCALLWNSDYKELVSAHGFAQNQLI-IWKYPS 543 (609)
Q Consensus 490 Dg~I~iwd~~t~~~~--~~~~~----~~~v~sl~~s~~g~~l~~~sG~~dg~I~-Iwd~~~ 543 (609)
-.-.+|.++..+... ..+.. ++-+..-.|.....++++++ +.|+.++ +|-.-+
T Consensus 275 h~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCs-FYDk~~~~~Wl~~t 334 (339)
T KOG0280|consen 275 HNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCS-FYDKKIRQLWLHIT 334 (339)
T ss_pred hcCceEEEecccccchheeeeccccccceeeccccccccceeeeee-ccccceeeeeeecc
Confidence 455666666543321 12222 22334444544445677765 4565543 775443
No 266
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.11 E-value=1.3e-07 Score=110.13 Aligned_cols=279 Identities=16% Similarity=0.217 Sum_probs=178.0
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEE----eCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEc
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLW----NGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWI 344 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iW----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~s 344 (609)
.|-++++-++. ++.+..+|.|.+. +... ..++.+-.+ +..|.+++||
T Consensus 77 ~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~-------------------------~~~E~VG~v--d~GI~a~~WS 129 (928)
T PF04762_consen 77 KIVSFQYLADSESLCIALASGDIILVREDPDPDE-------------------------DEIEIVGSV--DSGILAASWS 129 (928)
T ss_pred cEEEEEeccCCCcEEEEECCceEEEEEccCCCCC-------------------------ceeEEEEEE--cCcEEEEEEC
Confidence 46668887763 7778889999999 5555 555555554 6889999999
Q ss_pred cCCCEEEEEeCCCeEEEEeCC---------------C--------CeeEEEecC------------------------CC
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVS---------------A--------KKKCRTMDG------------------------HD 377 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~---------------~--------~~~~~~l~~------------------------h~ 377 (609)
||+..||..+.+|+|.+.+-. . |+...+|.| +.
T Consensus 130 PD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~d 209 (928)
T PF04762_consen 130 PDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWD 209 (928)
T ss_pred CCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccC
Confidence 999999999999998876421 0 111111111 22
Q ss_pred CceEEEEe--cCCEEEEEec---C---CeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC---CCcEEEEe
Q psy4876 378 VRVGALAW--NTYILSSGSR---C---GNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGN---DNLLNIWS 446 (609)
Q Consensus 378 ~~V~~l~~--~~~~L~sgs~---d---g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~---Dg~I~iwd 446 (609)
..-..|+| ||.++++.+- . ..|+||+-+ + ....+-..-.+--.+++|-|.|++||+.-. ...|.+|.
T Consensus 210 d~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G-~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE 287 (928)
T PF04762_consen 210 DGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-G-ELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE 287 (928)
T ss_pred CCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-c-eEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe
Confidence 34567889 7889988774 3 468899876 2 222222222333456899999999998765 35677777
Q ss_pred CCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCce--eEEEc--CCCCeEEEEEcCCC
Q psy4876 447 GVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC--LDSID--TKSQVCALLWNSDY 522 (609)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~--~~~~~--~~~~v~sl~~s~~g 522 (609)
-+...+. +....+......|..|.|++++. +||.. ....|.+|-..+..- .+.+. ....+..+.|+|..
T Consensus 288 rNGLrhg---eF~l~~~~~~~~v~~l~Wn~ds~-iLAv~---~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~ 360 (928)
T PF04762_consen 288 RNGLRHG---EFTLRFDPEEEKVIELAWNSDSE-ILAVW---LEDRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEK 360 (928)
T ss_pred cCCcEee---eEecCCCCCCceeeEEEECCCCC-EEEEE---ecCCceEEEeeCCEEEEEEEEEccCCCCCCceEECCCC
Confidence 5543211 21122224566899999999985 55554 244499999887652 23333 33455669999865
Q ss_pred Ce-EEEEEecCCCeEEEEEC----CCC--------ceEEEEe-----------------------CCCCCEEEEEEeCCC
Q psy4876 523 KE-LVSAHGFAQNQLIIWKY----PSL--------VKVAELH-----------------------GHSARVLNLAMSPDE 566 (609)
Q Consensus 523 ~~-l~~~sG~~dg~I~Iwd~----~~~--------~~~~~l~-----------------------~h~~~V~~l~~spdg 566 (609)
.. |.+.+ .+|.+.++++ ..+ ..+..+. .....|.+++|++++
T Consensus 361 p~~L~v~t--~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~ 438 (928)
T PF04762_consen 361 PLRLHVLT--SNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSN 438 (928)
T ss_pred CCEEEEEe--cCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCC
Confidence 44 33332 3355544432 110 0111111 124679999999999
Q ss_pred CEEEEEECCCCEEEEEcCCCc
Q psy4876 567 TTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 567 ~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
..+++...||.|.+|......
T Consensus 439 ~~~avl~~d~~l~~~~~~~~~ 459 (928)
T PF04762_consen 439 SRFAVLTSDGSLSIYEWDLKN 459 (928)
T ss_pred CeEEEEECCCCEEEEEecCCC
Confidence 889999999999999976544
No 267
>KOG1354|consensus
Probab=99.11 E-value=1.1e-08 Score=100.88 Aligned_cols=291 Identities=14% Similarity=0.280 Sum_probs=182.8
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCce--EEecCCccccccccccccccceeeeeeecCCCCeEEEEEccC
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKY--IICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQE 346 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spd 346 (609)
.+.+|.|...| +.+|..+|.|.++.-.......| ...|..+ ......+..++-...|..+.|.++
T Consensus 27 iis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqsh-----------epEFDYLkSleieEKinkIrw~~~ 95 (433)
T KOG1354|consen 27 IISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSH-----------EPEFDYLKSLEIEEKINKIRWLDD 95 (433)
T ss_pred ceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeecc-----------CcccchhhhhhhhhhhhhceecCC
Confidence 47788998876 55577789999987654221111 0111100 022233333444578999999987
Q ss_pred C--CEEEEEeCCCeEEEEeCCCCeeE-----------------------------------EEe-cCCCCceEEEEec--
Q psy4876 347 G--YMLGVGTSLGTVQLWDVSAKKKC-----------------------------------RTM-DGHDVRVGALAWN-- 386 (609)
Q Consensus 347 g--~~Lasgs~dg~I~iwd~~~~~~~-----------------------------------~~l-~~h~~~V~~l~~~-- 386 (609)
+ ..++..+.|.+|++|.+...... +.+ .+|...|.+|+++
T Consensus 96 ~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD 175 (433)
T KOG1354|consen 96 GNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSD 175 (433)
T ss_pred CCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCc
Confidence 6 56677889999999987532110 001 2577888899994
Q ss_pred CCEEEEEecCCeEEEEEcCCCCee--EEEEccC-----CCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccc
Q psy4876 387 TYILSSGSRCGNIVHHDVRSRDHK--VALLQNH-----TQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQP 458 (609)
Q Consensus 387 ~~~L~sgs~dg~I~iwd~~~~~~~--~~~~~~h-----~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~ 458 (609)
...+++ ..|=.|-+|++....+. +..++.+ +.-|++..|+| ..++|+..+..|+|++-|++..........
T Consensus 176 ~Et~lS-ADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsK 254 (433)
T KOG1354|consen 176 KETFLS-ADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSK 254 (433)
T ss_pred cceEee-ccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhh
Confidence 344444 45678999998765433 2233333 34688899999 566888888899999999995421110011
Q ss_pred e----------EeecCCcccEEEEEEcCCCCcEEEEEeccCC-CeEEEEECC-CCceeEEEcCCC---------------
Q psy4876 459 I----------HSLSRHQAAVKAIAWCPWSPNVLASGGGTAD-RHIYFWNVS-SGACLDSIDTKS--------------- 511 (609)
Q Consensus 459 ~----------~~~~~h~~~V~~l~~sp~~~~llasggGs~D-g~I~iwd~~-t~~~~~~~~~~~--------------- 511 (609)
+ .-+.+--..|..+.|++.|+++++ .| -+|++||+. ..+++.++..+.
T Consensus 255 lfEepedp~~rsffseiIsSISDvKFs~sGryils-----RDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~I 329 (433)
T KOG1354|consen 255 LFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILS-----RDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAI 329 (433)
T ss_pred hhccccCCcchhhHHHHhhhhhceEEccCCcEEEE-----eccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccch
Confidence 1 111222346889999999976554 35 899999995 555665554331
Q ss_pred -CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceE-------------------EEEe--CC-------------CCC
Q psy4876 512 -QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKV-------------------AELH--GH-------------SAR 556 (609)
Q Consensus 512 -~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~-------------------~~l~--~h-------------~~~ 556 (609)
.-..++|+.++..+++ |+-.+..++|+...+... .... |. ...
T Consensus 330 fdKFec~~sg~~~~v~T--Gsy~n~frvf~~~~gsk~d~tl~asr~~~~~~~~~k~~~V~~~g~r~~~~~~vd~ldf~kk 407 (433)
T KOG1354|consen 330 FDKFECSWSGNDSYVMT--GSYNNVFRVFNLARGSKEDFTLEASRKNMKPRKVLKLRLVSSSGKRKRDEISVDALDFRKK 407 (433)
T ss_pred hheeEEEEcCCcceEec--ccccceEEEecCCCCcceeecccccccCCcccccccceeeecCCCccccccccchhhhhhH
Confidence 2356899999999998 668899999985433211 0000 11 123
Q ss_pred EEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 557 VLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 557 V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
+.+.+|+|....+|.+..++ +.||
T Consensus 408 ilh~aWhp~en~ia~aatnn-lyif 431 (433)
T KOG1354|consen 408 ILHTAWHPKENSIAVAATNN-LYIF 431 (433)
T ss_pred HHhhccCCccceeeeeecCc-eEEe
Confidence 56778999999888887654 4444
No 268
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.10 E-value=9.1e-08 Score=113.48 Aligned_cols=243 Identities=10% Similarity=0.047 Sum_probs=157.9
Q ss_pred EEEEEccC-CCEEEEEeCCCeEEEEeCCCCeeEEEecC-C-------------CCceEEEEec--CCEEEEEe-cCCeEE
Q psy4876 339 CSVAWIQE-GYMLGVGTSLGTVQLWDVSAKKKCRTMDG-H-------------DVRVGALAWN--TYILSSGS-RCGNIV 400 (609)
Q Consensus 339 ~~v~~spd-g~~Lasgs~dg~I~iwd~~~~~~~~~l~~-h-------------~~~V~~l~~~--~~~L~sgs-~dg~I~ 400 (609)
..+++++. +..+++-+.++.|++||... ..+..+.+ . -.....++++ ++.|+++. .+..|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G-~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDG-NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCC-CEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 46888875 55666667788999999864 44444432 1 1134667774 55555544 456799
Q ss_pred EEEcCCCCeeEEEEccC-----------------CCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCC-c-cceE
Q psy4876 401 HHDVRSRDHKVALLQNH-----------------TQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFS-T-QPIH 460 (609)
Q Consensus 401 iwd~~~~~~~~~~~~~h-----------------~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~-~-~~~~ 460 (609)
++|+.++ .+.++.+. -....+++|+| ++.++++.+.++.|++||..++..... . ....
T Consensus 650 ~id~~~~--~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~ 727 (1057)
T PLN02919 650 EIDFVNE--TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYER 727 (1057)
T ss_pred EEecCCC--EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccc
Confidence 9998765 34433211 01245799999 566677777789999999876521000 0 0000
Q ss_pred eecC------CcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc--------------C--------CCC
Q psy4876 461 SLSR------HQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID--------------T--------KSQ 512 (609)
Q Consensus 461 ~~~~------h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~--------------~--------~~~ 512 (609)
...+ .-.....|+++|++..++++. +.++.|++||+.++....... . ...
T Consensus 728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVAD--s~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~ 805 (1057)
T PLN02919 728 NLNGSSGTSTSFAQPSGISLSPDLKELYIAD--SESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQH 805 (1057)
T ss_pred cCCCCccccccccCccEEEEeCCCCEEEEEE--CCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccC
Confidence 0000 112346799999998787776 368999999998765321110 0 013
Q ss_pred eEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe-------------CCCCCEEEEEEeCCCCEEEEEECCCCEE
Q psy4876 513 VCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH-------------GHSARVLNLAMSPDETTVLSAGADETLR 579 (609)
Q Consensus 513 v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~-------------~h~~~V~~l~~spdg~~L~s~s~Dg~I~ 579 (609)
...++++++|..+++ ...++.|++||..++....... +.-.....|+++++|+++++-+.++.|+
T Consensus 806 P~Gvavd~dG~LYVA--Ds~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Ir 883 (1057)
T PLN02919 806 PLGVLCAKDGQIYVA--DSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIR 883 (1057)
T ss_pred CceeeEeCCCcEEEE--ECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEE
Confidence 468899999986665 4579999999998776543221 1123577899999999989888999999
Q ss_pred EEEcCCCcc
Q psy4876 580 LWKIFEKVK 588 (609)
Q Consensus 580 iWdl~~~~~ 588 (609)
+||+.++..
T Consensus 884 vid~~~~~~ 892 (1057)
T PLN02919 884 YLDLNKGEA 892 (1057)
T ss_pred EEECCCCcc
Confidence 999988654
No 269
>KOG1064|consensus
Probab=99.09 E-value=4.2e-10 Score=129.81 Aligned_cols=192 Identities=16% Similarity=0.242 Sum_probs=152.1
Q ss_pred EEEEEecCC--CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCE
Q psy4876 272 LNLIDWSHF--NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYM 349 (609)
Q Consensus 272 v~~l~wsp~--~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~ 349 (609)
|.++.=+|. ..++++.||.|++|.... +......+......|+.+.|+.+|+.
T Consensus 2211 v~r~~sHp~~~~Yltgs~dgsv~~~~w~~-------------------------~~~v~~~rt~g~s~vtr~~f~~qGnk 2265 (2439)
T KOG1064|consen 2211 VRRMTSHPSDPYYLTGSQDGSVRMFEWGH-------------------------GQQVVCFRTAGNSRVTRSRFNHQGNK 2265 (2439)
T ss_pred eeeecCCCCCceEEecCCCceEEEEeccC-------------------------CCeEEEeeccCcchhhhhhhcccCCc
Confidence 555666665 488999999999999866 33333333335588999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEe---cCCeEEEEEcCCCCeeEEEEccCCCCeEEEEE
Q psy4876 350 LGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGS---RCGNIVHHDVRSRDHKVALLQNHTQEVCGLKW 426 (609)
Q Consensus 350 Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs---~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 426 (609)
+.++..||.+.+|.+. .+.....+.|......+.|-+..+++++ .++.+.+||.-.....-..-..|.+.++++++
T Consensus 2266 ~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~ 2344 (2439)
T KOG1064|consen 2266 FGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAY 2344 (2439)
T ss_pred eeeeccCCceeecccC-CcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEE
Confidence 9999999999999987 5777788889999999999778888775 46789999976543222333789999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEE
Q psy4876 427 SPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDS 506 (609)
Q Consensus 427 spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~ 506 (609)
-|..++|++|+.+|.|++||++.. +.++.+.. ++ .+..+++| +..|.|+||++..-..+++
T Consensus 2345 ~P~~qllisggr~G~v~l~D~rqr------ql~h~~~~---------~~--~~~~f~~~--ss~g~ikIw~~s~~~ll~~ 2405 (2439)
T KOG1064|consen 2345 APKHQLLISGGRKGEVCLFDIRQR------QLRHTFQA---------LD--TREYFVTG--SSEGNIKIWRLSEFGLLHT 2405 (2439)
T ss_pred cCcceEEEecCCcCcEEEeehHHH------HHHHHhhh---------hh--hhheeecc--CcccceEEEEccccchhhc
Confidence 999999999999999999999976 56665543 44 34577776 5899999999988777766
Q ss_pred Ec
Q psy4876 507 ID 508 (609)
Q Consensus 507 ~~ 508 (609)
+.
T Consensus 2406 ~p 2407 (2439)
T KOG1064|consen 2406 FP 2407 (2439)
T ss_pred Cc
Confidence 54
No 270
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.05 E-value=2.4e-07 Score=98.60 Aligned_cols=268 Identities=13% Similarity=0.037 Sum_probs=162.9
Q ss_pred CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEeCCCeEE
Q psy4876 281 NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQ 360 (609)
Q Consensus 281 ~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~ 360 (609)
.+++++.++.|+.+|..+ ++..-...+. ......+. .++..+++++.+|.|.
T Consensus 67 ~v~v~~~~g~v~a~d~~t-------------------------G~~~W~~~~~-~~~~~~p~--v~~~~v~v~~~~g~l~ 118 (377)
T TIGR03300 67 KVYAADADGTVVALDAET-------------------------GKRLWRVDLD-ERLSGGVG--ADGGLVFVGTEKGEVI 118 (377)
T ss_pred EEEEECCCCeEEEEEccC-------------------------CcEeeeecCC-CCcccceE--EcCCEEEEEcCCCEEE
Confidence 466777789999999887 5433222222 11111222 2467888899999999
Q ss_pred EEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCe-----EEEEEccCCCEEEE
Q psy4876 361 LWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEV-----CGLKWSPDGRYLAS 435 (609)
Q Consensus 361 iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V-----~~l~~spdg~~las 435 (609)
.+|..+|+.+................+..++.++.+|.|+.||..++. .+.........+ .+... .+..++.
T Consensus 119 ald~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~-~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~ 195 (377)
T TIGR03300 119 ALDAEDGKELWRAKLSSEVLSPPLVANGLVVVRTNDGRLTALDAATGE-RLWTYSRVTPALTLRGSASPVI--ADGGVLV 195 (377)
T ss_pred EEECCCCcEeeeeccCceeecCCEEECCEEEEECCCCeEEEEEcCCCc-eeeEEccCCCceeecCCCCCEE--ECCEEEE
Confidence 999999988776653332222233356677888889999999998874 444443222111 11111 1346778
Q ss_pred EeCCCcEEEEeCCCCCCCCCccceEeecCCc--c---cE-EEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcC
Q psy4876 436 GGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ--A---AV-KAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT 509 (609)
Q Consensus 436 gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~--~---~V-~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~ 509 (609)
+..++.+..+|..+++..+.... ....+.. . .+ ....+. +..+++.+ .++.++.||..+|+.+.....
T Consensus 196 ~~~~g~v~ald~~tG~~~W~~~~-~~~~g~~~~~~~~~~~~~p~~~--~~~vy~~~---~~g~l~a~d~~tG~~~W~~~~ 269 (377)
T TIGR03300 196 GFAGGKLVALDLQTGQPLWEQRV-ALPKGRTELERLVDVDGDPVVD--GGQVYAVS---YQGRVAALDLRSGRVLWKRDA 269 (377)
T ss_pred ECCCCEEEEEEccCCCEeeeecc-ccCCCCCchhhhhccCCccEEE--CCEEEEEE---cCCEEEEEECCCCcEEEeecc
Confidence 88889999999998843221100 0000000 0 00 011121 33455543 689999999999988776653
Q ss_pred CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCC-CEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 510 KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSA-RVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 510 ~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~-~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
.. ..... ..+..++++ ..+|.|..+|..+++.+........ .+..... .+..|++++.||.|++||..+++.
T Consensus 270 ~~-~~~p~--~~~~~vyv~--~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~ 342 (377)
T TIGR03300 270 SS-YQGPA--VDDNRLYVT--DADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSF 342 (377)
T ss_pred CC-ccCce--EeCCEEEEE--CCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCE
Confidence 32 11222 245666664 3799999999999988765532111 1222222 467899999999999999988876
Q ss_pred chhh
Q psy4876 589 SKKK 592 (609)
Q Consensus 589 ~~k~ 592 (609)
.-+.
T Consensus 343 ~~~~ 346 (377)
T TIGR03300 343 VARL 346 (377)
T ss_pred EEEE
Confidence 5443
No 271
>KOG0974|consensus
Probab=99.03 E-value=4.1e-09 Score=116.92 Aligned_cols=181 Identities=16% Similarity=0.258 Sum_probs=140.1
Q ss_pred CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCC-----CeEEEEEccCCCEEEEEeC
Q psy4876 281 NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNE-----NVCSVAWIQEGYMLGVGTS 355 (609)
Q Consensus 281 ~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~-----~V~~v~~spdg~~Lasgs~ 355 (609)
.++.+..++.+.|||... +. .+.++.+.. ...-+-++++.-++++|+.
T Consensus 101 ~i~l~~~~ns~~i~d~~~-------------------------~~--~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv 153 (967)
T KOG0974|consen 101 KIALVTSRNSLLIRDSKN-------------------------SS--VLSKIQSDERCTLYSSLIIGDSAEELYIASGSV 153 (967)
T ss_pred eEEEEEcCceEEEEeccc-------------------------Cc--eehhcCCCceEEEEeEEEEeccCcEEEEEeccc
Confidence 466688889999999876 21 111221111 1222344566679999999
Q ss_pred CCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEE
Q psy4876 356 LGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYL 433 (609)
Q Consensus 356 dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~l 433 (609)
-+.|.+|+....+.-..+.+|.+.|..+.| +|.++++.++|.++++|++.+.+......-+|+..|..++|+|+ .+
T Consensus 154 ~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i 231 (967)
T KOG0974|consen 154 FGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RI 231 (967)
T ss_pred cccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--ee
Confidence 999999999744444468899999999999 89999999999999999999986555577789999999999998 89
Q ss_pred EEEeCCCcEEEEeCCCCCCCCCccceEeecCCcc-cEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC
Q psy4876 434 ASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQA-AVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 434 asgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~-~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t 500 (609)
++++.|-+.++|+.... .+..+.+|.. .|..++..+.. .+++++| .|+.+++||+..
T Consensus 232 ~t~gedctcrvW~~~~~-------~l~~y~~h~g~~iw~~~~~~~~-~~~vT~g--~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 232 ITVGEDCTCRVWGVNGT-------QLEVYDEHSGKGIWKIAVPIGV-IIKVTGG--NDSTLKLWDLNG 289 (967)
T ss_pred EEeccceEEEEEecccc-------eehhhhhhhhcceeEEEEcCCc-eEEEeec--cCcchhhhhhhc
Confidence 99999999999976643 3446777754 58888888865 5666765 899999999854
No 272
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.01 E-value=2.2e-07 Score=98.84 Aligned_cols=253 Identities=16% Similarity=0.073 Sum_probs=155.7
Q ss_pred CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEeCCCeEE
Q psy4876 281 NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQ 360 (609)
Q Consensus 281 ~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~ 360 (609)
.+++++.++.|+.+|..+ ++..-...+ .+.+.+.-.. .+..+++++.+|.|.
T Consensus 107 ~v~v~~~~g~l~ald~~t-------------------------G~~~W~~~~--~~~~~~~p~v-~~~~v~v~~~~g~l~ 158 (377)
T TIGR03300 107 LVFVGTEKGEVIALDAED-------------------------GKELWRAKL--SSEVLSPPLV-ANGLVVVRTNDGRLT 158 (377)
T ss_pred EEEEEcCCCEEEEEECCC-------------------------CcEeeeecc--CceeecCCEE-ECCEEEEECCCCeEE
Confidence 366677889999999887 443322222 2222211111 245677788899999
Q ss_pred EEeCCCCeeEEEecCCCCce-----EEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccC-C---CC---eEEEEEcc
Q psy4876 361 LWDVSAKKKCRTMDGHDVRV-----GALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNH-T---QE---VCGLKWSP 428 (609)
Q Consensus 361 iwd~~~~~~~~~l~~h~~~V-----~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h-~---~~---V~~l~~sp 428 (609)
.||..+|+.+..+......+ .+....+..++.+..+|.+..+|..++. .+...... . .. +..+.-+|
T Consensus 159 a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~-~~W~~~~~~~~g~~~~~~~~~~~~~p 237 (377)
T TIGR03300 159 ALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQ-PLWEQRVALPKGRTELERLVDVDGDP 237 (377)
T ss_pred EEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCC-EeeeeccccCCCCCchhhhhccCCcc
Confidence 99999998877765433221 1122234577888889999999998874 33322110 0 00 00011111
Q ss_pred --CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEE
Q psy4876 429 --DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDS 506 (609)
Q Consensus 429 --dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~ 506 (609)
.+..+++++.+|.++.||..++ +.+..... . ....... .+..+++. +.+|.|+.+|..+|+.+..
T Consensus 238 ~~~~~~vy~~~~~g~l~a~d~~tG------~~~W~~~~-~-~~~~p~~--~~~~vyv~---~~~G~l~~~d~~tG~~~W~ 304 (377)
T TIGR03300 238 VVDGGQVYAVSYQGRVAALDLRSG------RVLWKRDA-S-SYQGPAV--DDNRLYVT---DADGVVVALDRRSGSELWK 304 (377)
T ss_pred EEECCEEEEEEcCCEEEEEECCCC------cEEEeecc-C-CccCceE--eCCEEEEE---CCCCeEEEEECCCCcEEEc
Confidence 3557888888999999999988 33333321 1 1112222 24445554 3799999999999988766
Q ss_pred EcC-CC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEE-EEEEeCCCCEEEEEECCCCEEEE
Q psy4876 507 IDT-KS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVL-NLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 507 ~~~-~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~-~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
... .. ...+... .+..+++ +..+|.|+++|..+++.+..+..+...+. ...+. + ..|+.++.||.|..|
T Consensus 305 ~~~~~~~~~ssp~i--~g~~l~~--~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~-~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 305 NDELKYRQLTAPAV--VGGYLVV--GDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-G-DGLLVQTRDGDLYAF 376 (377)
T ss_pred cccccCCccccCEE--ECCEEEE--EeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-C-CEEEEEeCCceEEEe
Confidence 532 22 2222222 3556776 44899999999999999998876664432 22332 3 358899999999876
No 273
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.00 E-value=4.4e-07 Score=105.84 Aligned_cols=242 Identities=17% Similarity=0.274 Sum_probs=156.3
Q ss_pred CCCeEEEEEccCCCEEEEEeC---C---CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEec---CCeEEEEE
Q psy4876 335 NENVCSVAWIQEGYMLGVGTS---L---GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSR---CGNIVHHD 403 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~---d---g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~---dg~I~iwd 403 (609)
++.-..++|-.||.|+|+.+. . ..|+||+-+ |.+..+-..-.+--.+++| +|+++++... .-.|.+|.
T Consensus 209 dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE 287 (928)
T PF04762_consen 209 DDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE 287 (928)
T ss_pred CCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe
Confidence 446678999999999999875 3 479999966 6655555544455567899 6888888765 34566776
Q ss_pred cCCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC-CcccEEEEEEcCCCCc
Q psy4876 404 VRSRDHKVALLQ--NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR-HQAAVKAIAWCPWSPN 480 (609)
Q Consensus 404 ~~~~~~~~~~~~--~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~ 480 (609)
-..-.+--..+. .....|..|.|++|+..||....|. |.+|-..+-. + -..+.+.- ....+..+.|+|....
T Consensus 288 rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYH--W--YLKqei~~~~~~~~~~~~Wdpe~p~ 362 (928)
T PF04762_consen 288 RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYH--W--YLKQEIRFSSSESVNFVKWDPEKPL 362 (928)
T ss_pred cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCE--E--EEEEEEEccCCCCCCceEECCCCCC
Confidence 543322223333 3556899999999999999988665 9999876542 1 12222221 2233455999998777
Q ss_pred EEEEEeccCCCeEEEEE----CCCCc--------e------------------------eEEEcCCCCeEEEEEcCCCCe
Q psy4876 481 VLASGGGTADRHIYFWN----VSSGA--------C------------------------LDSIDTKSQVCALLWNSDYKE 524 (609)
Q Consensus 481 llasggGs~Dg~I~iwd----~~t~~--------~------------------------~~~~~~~~~v~sl~~s~~g~~ 524 (609)
.|.... .++.+..++ +..+. . ...+...+.|..++|++++..
T Consensus 363 ~L~v~t--~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~ 440 (928)
T PF04762_consen 363 RLHVLT--SNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSR 440 (928)
T ss_pred EEEEEe--cCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCe
Confidence 665542 345554433 22110 1 123335568999999999987
Q ss_pred EEEEEecCCCeEEEEECCCCce--------EEEEe----------CCCCCEEEEEEeCCCCEEEEEECC---CCEEEEEc
Q psy4876 525 LVSAHGFAQNQLIIWKYPSLVK--------VAELH----------GHSARVLNLAMSPDETTVLSAGAD---ETLRLWKI 583 (609)
Q Consensus 525 l~~~sG~~dg~I~Iwd~~~~~~--------~~~l~----------~h~~~V~~l~~spdg~~L~s~s~D---g~I~iWdl 583 (609)
+++.. .||.|.+|....... ...+. .-...+..++|..+..+++....+ ..+.++++
T Consensus 441 ~avl~--~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 518 (928)
T PF04762_consen 441 FAVLT--SDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDI 518 (928)
T ss_pred EEEEE--CCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEe
Confidence 77765 799999998543211 11111 123457889998888777766664 67888888
Q ss_pred CCC
Q psy4876 584 FEK 586 (609)
Q Consensus 584 ~~~ 586 (609)
...
T Consensus 519 ~~~ 521 (928)
T PF04762_consen 519 DDS 521 (928)
T ss_pred ccC
Confidence 544
No 274
>KOG2041|consensus
Probab=98.99 E-value=1.1e-08 Score=108.99 Aligned_cols=229 Identities=14% Similarity=0.272 Sum_probs=161.7
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCe---------------eEEEecCCCCceEEEEec--CCEEEEEecC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK---------------KCRTMDGHDVRVGALAWN--TYILSSGSRC 396 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~---------------~~~~l~~h~~~V~~l~~~--~~~L~sgs~d 396 (609)
......|++|+.+..++|+|+.||.++|..+.+.. .-+++.||...|..+.|| ...|.+...+
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~ 92 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS 92 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence 55678899999999999999999999999876431 124678999999999995 5788899999
Q ss_pred CeEEEEEcCCCCeeEEE-EccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEc
Q psy4876 397 GNIVHHDVRSRDHKVAL-LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWC 475 (609)
Q Consensus 397 g~I~iwd~~~~~~~~~~-~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 475 (609)
|.|.+|-+-.+.-.... -...++.|.+++|..||..++..-.||.|.+=.++... .+. ..+.+ .....+.|+
T Consensus 93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNR-Iwg----KeLkg--~~l~hv~ws 165 (1189)
T KOG2041|consen 93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNR-IWG----KELKG--QLLAHVLWS 165 (1189)
T ss_pred ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccce-ecc----hhcch--heccceeec
Confidence 99999998776422111 22345779999999999999999999998776665431 111 11111 123478899
Q ss_pred CCCCcEEEEEeccCCCeEEEEECCCC-------ceeEEEc-----CCCCeEEEEEc--------CCCCeEEEEEecCCCe
Q psy4876 476 PWSPNVLASGGGTADRHIYFWNVSSG-------ACLDSID-----TKSQVCALLWN--------SDYKELVSAHGFAQNQ 535 (609)
Q Consensus 476 p~~~~llasggGs~Dg~I~iwd~~t~-------~~~~~~~-----~~~~v~sl~~s--------~~g~~l~~~sG~~dg~ 535 (609)
+|...+|+. ...|.+.+||.... .|..... ....+..+.|. |+...++++ +.+|.
T Consensus 166 ~D~~~~Lf~---~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavc--y~nGr 240 (1189)
T KOG2041|consen 166 EDLEQALFK---KANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVC--YANGR 240 (1189)
T ss_pred ccHHHHHhh---hcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEE--EcCce
Confidence 998766653 47899999997632 1211111 12246677774 466777774 47888
Q ss_pred EEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC
Q psy4876 536 LIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD 575 (609)
Q Consensus 536 I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D 575 (609)
+.|..-.+......+. ..-.|.++.|+++|..|+.+|.|
T Consensus 241 ~QiMR~eND~~Pvv~d-tgm~~vgakWnh~G~vLAvcG~~ 279 (1189)
T KOG2041|consen 241 MQIMRSENDPEPVVVD-TGMKIVGAKWNHNGAVLAVCGND 279 (1189)
T ss_pred ehhhhhcCCCCCeEEe-cccEeecceecCCCcEEEEccCc
Confidence 8887654433222222 22568899999999999999875
No 275
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.95 E-value=1.8e-07 Score=96.71 Aligned_cols=257 Identities=13% Similarity=0.152 Sum_probs=168.0
Q ss_pred EEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceee--eeeecCCCCeEEEEEccCC--C
Q psy4876 274 LIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDH--LMDLEGNENVCSVAWIQEG--Y 348 (609)
Q Consensus 274 ~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~h~~~V~~v~~spdg--~ 348 (609)
.+.|+-+. ++|--.+..++|+++ + ..+.. ...+ ....|...+|+|.| .
T Consensus 136 ~~k~s~~D~y~ARvv~~sl~i~e~-t-------------------------~n~~~~p~~~l-r~~gi~dFsisP~~n~~ 188 (561)
T COG5354 136 VLKFSIDDKYVARVVGSSLYIHEI-T-------------------------DNIEEHPFKNL-RPVGILDFSISPEGNHD 188 (561)
T ss_pred eeeeeecchhhhhhccCeEEEEec-C-------------------------CccccCchhhc-cccceeeEEecCCCCCc
Confidence 47788764 555336778999997 4 22221 1111 24678899999975 3
Q ss_pred EEEE-----EeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEe-----------cCCeEEEEEcCCCCee
Q psy4876 349 MLGV-----GTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGS-----------RCGNIVHHDVRSRDHK 410 (609)
Q Consensus 349 ~Las-----gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs-----------~dg~I~iwd~~~~~~~ 410 (609)
-||. +...+.++||.+..+..+.+-.-....-..+.|+ |++|++-- ....+++++++...
T Consensus 189 ~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-- 266 (561)
T COG5354 189 ELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-- 266 (561)
T ss_pred eEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc--
Confidence 4554 4567899999998776665544333334456673 54443321 12568888888653
Q ss_pred EEEEccCCCCeEEEEEccCCCEEEEEe--CCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 411 VALLQNHTQEVCGLKWSPDGRYLASGG--NDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 411 ~~~~~~h~~~V~~l~~spdg~~lasgs--~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs 488 (609)
+.......++|...+|.|.++.|++.+ .+-.+.++|++.. ..+ ......-..+.|+|.+.++|+.|-|.
T Consensus 267 i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-------l~~--~~Pe~~rNT~~fsp~~r~il~agF~n 337 (561)
T COG5354 267 IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-------LRF--YFPEQKRNTIFFSPHERYILFAGFDN 337 (561)
T ss_pred cceeccccccceeeeecccCCceeEEecccccceeecccccc-------eEE--ecCCcccccccccCcccEEEEecCCc
Confidence 333336688999999999888776655 6788999999853 222 23445556788999998888888767
Q ss_pred CCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEec----CCCeEEEEECCCCceEEEEeCCCCCEEEEEEeC
Q psy4876 489 ADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGF----AQNQLIIWKYPSLVKVAELHGHSARVLNLAMSP 564 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~----~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~sp 564 (609)
..|.|-+||....-.+..--......-+.|+|++.++.+...+ .|+.|.|||+...... ..+.+.|.|
T Consensus 338 l~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f--------el~~~~W~p 409 (561)
T COG5354 338 LQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKVF--------ELTNITWDP 409 (561)
T ss_pred cccceEEeccCCceEEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEecCchhh--------hhhhccccC
Confidence 7899999998765444422233345667899999999876432 4789999998543221 345566666
Q ss_pred CCCEEEEEECCC
Q psy4876 565 DETTVLSAGADE 576 (609)
Q Consensus 565 dg~~L~s~s~Dg 576 (609)
.|++.-+.+.+.
T Consensus 410 ~~~~~ttsSs~~ 421 (561)
T COG5354 410 SGQYVTTSSSCP 421 (561)
T ss_pred CcccceeeccCC
Confidence 666555554443
No 276
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.94 E-value=1.2e-08 Score=99.28 Aligned_cols=240 Identities=16% Similarity=0.293 Sum_probs=167.6
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCe-----eEEEecCCC------------CceEEEEe-c---CCEEEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK-----KCRTMDGHD------------VRVGALAW-N---TYILSS 392 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~-----~~~~l~~h~------------~~V~~l~~-~---~~~L~s 392 (609)
..+.|++|.|...|.||++|...|.|.+|.-.... ....+++|. ..|..+.| + ...++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 56789999999999999999999999999765432 233456664 45778888 2 256667
Q ss_pred EecCCeEEEEEcCCCC------------------------------------ee-----EEEE-ccCCCCeEEEEEccCC
Q psy4876 393 GSRCGNIVHHDVRSRD------------------------------------HK-----VALL-QNHTQEVCGLKWSPDG 430 (609)
Q Consensus 393 gs~dg~I~iwd~~~~~------------------------------------~~-----~~~~-~~h~~~V~~l~~spdg 430 (609)
.+.|.+|++|.+.... .. .+.+ ..|.-.|.++.|..|.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 7789999999886431 00 0111 3567778899999998
Q ss_pred CEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCC-----cccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCce-e
Q psy4876 431 RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRH-----QAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC-L 504 (609)
Q Consensus 431 ~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h-----~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~-~ 504 (609)
+.++++. |-.|.+|++.-....+ .+..+..| ..-|++..|+|....++.-. +..|.|++-|++.... .
T Consensus 185 et~lSaD-dLrINLWnl~i~D~sF---nIVDiKP~nmeeLteVItSaeFhp~~cn~fmYS--sSkG~Ikl~DlRq~alcd 258 (460)
T COG5170 185 ETLLSAD-DLRINLWNLEIIDGSF---NIVDIKPHNMEELTEVITSAEFHPEMCNVFMYS--SSKGEIKLNDLRQSALCD 258 (460)
T ss_pred heeeecc-ceeeeeccccccCCce---EEEeccCccHHHHHHHHhhcccCHhHcceEEEe--cCCCcEEehhhhhhhhcc
Confidence 8888764 6889999987653221 22223333 34578889999877777665 4799999999984321 1
Q ss_pred E-------EEc---------CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC-ceEEEEeCCC------------C
Q psy4876 505 D-------SID---------TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL-VKVAELHGHS------------A 555 (609)
Q Consensus 505 ~-------~~~---------~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~-~~~~~l~~h~------------~ 555 (609)
. .++ .-+.|..+.|+++|+++++- +-.+|+|||.... .++.++.-|. +
T Consensus 259 n~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsR---dyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnD 335 (460)
T COG5170 259 NSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSR---DYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYEND 335 (460)
T ss_pred CchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEe---ccceEEEEecccccCCceeechHHHHHHHHHhhhhcc
Confidence 1 111 11368889999999999973 4789999998753 4566664442 2
Q ss_pred CE---EEEEEeCCCCEEEEEECCCCEEEEE
Q psy4876 556 RV---LNLAMSPDETTVLSAGADETLRLWK 582 (609)
Q Consensus 556 ~V---~~l~~spdg~~L~s~s~Dg~I~iWd 582 (609)
.| ..+.|+.|.+.+.+|+..+..-|+-
T Consensus 336 aifdkFeisfSgd~~~v~sgsy~NNfgiyp 365 (460)
T COG5170 336 AIFDKFEISFSGDDKHVLSGSYSNNFGIYP 365 (460)
T ss_pred ceeeeEEEEecCCcccccccccccceeeec
Confidence 22 3577888888898888877766665
No 277
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.93 E-value=1.8e-06 Score=84.04 Aligned_cols=236 Identities=16% Similarity=0.182 Sum_probs=141.2
Q ss_pred EEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec--CCCCeEEEEEccCCCEEE
Q psy4876 275 IDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE--GNENVCSVAWIQEGYMLG 351 (609)
Q Consensus 275 l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--h~~~V~~v~~spdg~~La 351 (609)
++-+.+| +||+-.|..|.|-...+.- ..+...+.+. ..-.=.-++||||+.+||
T Consensus 3 ~~~~~~Gk~lAi~qd~~iEiRsa~Ddf-----------------------~si~~kcqVpkD~~PQWRkl~WSpD~tlLa 59 (282)
T PF15492_consen 3 LALSSDGKLLAILQDQCIEIRSAKDDF-----------------------SSIIGKCQVPKDPNPQWRKLAWSPDCTLLA 59 (282)
T ss_pred eeecCCCcEEEEEeccEEEEEeccCCc-----------------------hheeEEEecCCCCCchheEEEECCCCcEEE
Confidence 3445665 9999999999998877621 2222222333 334456799999999999
Q ss_pred EEeCCCeEEEEeCCCCeeEEEecC-------CCCceEEEEe-c-------CCEEEEEecCCeEEEEEcCCC----CeeEE
Q psy4876 352 VGTSLGTVQLWDVSAKKKCRTMDG-------HDVRVGALAW-N-------TYILSSGSRCGNIVHHDVRSR----DHKVA 412 (609)
Q Consensus 352 sgs~dg~I~iwd~~~~~~~~~l~~-------h~~~V~~l~~-~-------~~~L~sgs~dg~I~iwd~~~~----~~~~~ 412 (609)
.+...|+|++||+.. ..+..+.. -...|..+.| . ...|++-..+|.++-|-+..+ -....
T Consensus 60 ~a~S~G~i~vfdl~g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~h 138 (282)
T PF15492_consen 60 YAESTGTIRVFDLMG-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENH 138 (282)
T ss_pred EEcCCCeEEEEeccc-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeE
Confidence 999999999999975 33434332 2356677777 1 235667777888877765321 12222
Q ss_pred EEc---cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 413 LLQ---NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 413 ~~~---~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
.+. .+...|.++.++|..++|++||.... +.+. -......+++-..-.+.++..-+.. ..
T Consensus 139 sfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~------~~~~----------s~a~~~GLtaWRiL~~~Pyyk~v~~-~~ 201 (282)
T PF15492_consen 139 SFSFSSHYPHGINSAVYHPKHRLLLVGGCEQN------QDGM----------SKASSCGLTAWRILSDSPYYKQVTS-SE 201 (282)
T ss_pred EEEecccCCCceeEEEEcCCCCEEEEeccCCC------CCcc----------ccccccCceEEEEcCCCCcEEEccc-cC
Confidence 222 34678999999999888888775322 0000 0011111222222112222211110 01
Q ss_pred C------CeEEEEECCCCceeEE-EcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC
Q psy4876 490 D------RHIYFWNVSSGACLDS-IDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH 553 (609)
Q Consensus 490 D------g~I~iwd~~t~~~~~~-~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h 553 (609)
| .+..+|.+-+...... -.....|..|..||||..|++++ .+|.|.+|++++......+.-+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih--~sG~lsLW~iPsL~~~~~W~~~ 270 (282)
T PF15492_consen 202 DDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIH--FSGSLSLWEIPSLRLQRSWKQD 270 (282)
T ss_pred ccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEE--cCCeEEEEecCcchhhcccchh
Confidence 1 1223444332222111 12346899999999999999988 7999999999998887766544
No 278
>KOG4190|consensus
Probab=98.93 E-value=2e-09 Score=111.28 Aligned_cols=207 Identities=15% Similarity=0.259 Sum_probs=153.1
Q ss_pred eEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCC------eeEEEEccCCCCeEEEEEccCCCEEEEEeCCC
Q psy4876 369 KCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRD------HKVALLQNHTQEVCGLKWSPDGRYLASGGNDN 440 (609)
Q Consensus 369 ~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~------~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg 440 (609)
.+..+.+|...|..++- |.+-+++++.|.+|++|.++... .+..+++.|+.+|..+.|..+-++++++ ||
T Consensus 727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~ 804 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG 804 (1034)
T ss_pred eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence 35567889999988876 67889999999999999987432 3567788999999999999998888865 78
Q ss_pred cEEEEeCCCCCCCCCccceEeecC--CcccEEEEEEcCC-CCcEEEEEeccCCCeEEEEECCCCceeEEEcC------CC
Q psy4876 441 LLNIWSGVPGQHTFSTQPIHSLSR--HQAAVKAIAWCPW-SPNVLASGGGTADRHIYFWNVSSGACLDSIDT------KS 511 (609)
Q Consensus 441 ~I~iwd~~~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~-~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~------~~ 511 (609)
.|++||.--+ .++..+.. ..+.+..+..-+. ...++..|. +...+|+++|.+.++-...+.. ..
T Consensus 805 giHlWDPFig------r~Laq~~dapk~~a~~~ikcl~nv~~~iliAgc-saeSTVKl~DaRsce~~~E~kVcna~~Pna 877 (1034)
T KOG4190|consen 805 GIHLWDPFIG------RLLAQMEDAPKEGAGGNIKCLENVDRHILIAGC-SAESTVKLFDARSCEWTCELKVCNAPGPNA 877 (1034)
T ss_pred cceeeccccc------chhHhhhcCcccCCCceeEecccCcchheeeec-cchhhheeeecccccceeeEEeccCCCCch
Confidence 9999998766 34332211 1222333333333 334555543 6899999999998887666642 24
Q ss_pred CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEE-EEcCCCc
Q psy4876 512 QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRL-WKIFEKV 587 (609)
Q Consensus 512 ~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~i-Wdl~~~~ 587 (609)
-+.+++..+.|+++++ +-..|.|.+.|.++|..+..++..+.....++ .|..+.|+....|.++.+ |.-..+-
T Consensus 878 ~~R~iaVa~~GN~lAa--~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgi 951 (1034)
T KOG4190|consen 878 LTRAIAVADKGNKLAA--ALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGI 951 (1034)
T ss_pred heeEEEeccCcchhhH--HhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCe
Confidence 6889999999999998 55899999999999999888776555555555 356667777778888888 7655544
No 279
>KOG3914|consensus
Probab=98.92 E-value=1.9e-08 Score=101.34 Aligned_cols=161 Identities=19% Similarity=0.251 Sum_probs=111.2
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCe----eEEEecCCCCceEEEEe---cCCEEE--EEecCCeEEEEEcCCC
Q psy4876 337 NVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK----KCRTMDGHDVRVGALAW---NTYILS--SGSRCGNIVHHDVRSR 407 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~----~~~~l~~h~~~V~~l~~---~~~~L~--sgs~dg~I~iwd~~~~ 407 (609)
.+..+..++.+++||++..+....+++..... ++.... -..+-.++.| +...++ ..+....+.+|....
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~- 141 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS- 141 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccc-
Confidence 34556678889999999988887777765433 222221 2222233333 333222 223344455555544
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEee-cCCcccEEEEEEcCCCCcEEEEEe
Q psy4876 408 DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL-SRHQAAVKAIAWCPWSPNVLASGG 486 (609)
Q Consensus 408 ~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~llasgg 486 (609)
.....+-+|-+.+..++|+||+++|+++..|..|+|-..... ..+..+ .+|...|..++.-++. +|++||
T Consensus 142 -~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~------f~IesfclGH~eFVS~isl~~~~--~LlS~s 212 (390)
T KOG3914|consen 142 -GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPAT------FVIESFCLGHKEFVSTISLTDNY--LLLSGS 212 (390)
T ss_pred -cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcc------cchhhhccccHhheeeeeeccCc--eeeecC
Confidence 245566789999999999999999999999999999877654 233333 4799999999998754 566665
Q ss_pred ccCCCeEEEEECCCCceeEEEcCC
Q psy4876 487 GTADRHIYFWNVSSGACLDSIDTK 510 (609)
Q Consensus 487 Gs~Dg~I~iwd~~t~~~~~~~~~~ 510 (609)
.|++|++||+.+|+++.+++..
T Consensus 213 --GD~tlr~Wd~~sgk~L~t~dl~ 234 (390)
T KOG3914|consen 213 --GDKTLRLWDITSGKLLDTCDLS 234 (390)
T ss_pred --CCCcEEEEecccCCcccccchh
Confidence 4999999999999999877643
No 280
>KOG1064|consensus
Probab=98.91 E-value=7.3e-09 Score=119.91 Aligned_cols=196 Identities=13% Similarity=0.255 Sum_probs=151.2
Q ss_pred CCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCC
Q psy4876 376 HDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHT 453 (609)
Q Consensus 376 h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~ 453 (609)
+-..|.++.-+ .-+.++|+.||.|++|....++..+..-......|+.+.|+.+|+.+..+..||.+.+|.+..
T Consensus 2207 ~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p---- 2282 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP---- 2282 (2439)
T ss_pred ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCC----
Confidence 33444444443 246779999999999999887644444444458899999999999999999999999999873
Q ss_pred CCccceEeecCCcccEEEEEEcCCCCcEEEEEe-ccCCCeEEEEECCCC---ceeEEEcCCCCeEEEEEcCCCCeEEEEE
Q psy4876 454 FSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG-GTADRHIYFWNVSSG---ACLDSIDTKSQVCALLWNSDYKELVSAH 529 (609)
Q Consensus 454 ~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg-Gs~Dg~I~iwd~~t~---~~~~~~~~~~~v~sl~~s~~g~~l~~~s 529 (609)
++....+.|.....++.|-. .++++.| .+.++.+.+||..-. .++. .-+.+.++++++-|....+++
T Consensus 2283 ---k~~~s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qllis-- 2353 (2439)
T KOG1064|consen 2283 ---KPYTSWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLLIS-- 2353 (2439)
T ss_pred ---cceeccccCCccccceeeee---hhhhccccCCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEEEe--
Confidence 67888888999999998876 3555543 456789999998632 2344 345678999999999999999
Q ss_pred ecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 530 GFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 530 G~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
|+.+|.|++||++..+.+..++. ++ ...++++|+..|.|+||++.+....+....
T Consensus 2354 ggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2354 GGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred cCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCch
Confidence 66999999999987776655543 44 567999999999999999998766554433
No 281
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.91 E-value=1.7e-06 Score=92.97 Aligned_cols=216 Identities=8% Similarity=-0.017 Sum_probs=134.1
Q ss_pred CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCC-EEEEEec---CCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCC
Q psy4876 357 GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTY-ILSSGSR---CGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDG 430 (609)
Q Consensus 357 g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~-~L~sgs~---dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg 430 (609)
..|.+-|.+... .+.+.... .+....| +++ .++..+. +..|+++|+.++. ...+....+.+....|+|||
T Consensus 169 ~~l~~~d~dg~~-~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~--~~~lt~~~g~~~~~~~SPDG 244 (419)
T PRK04043 169 SNIVLADYTLTY-QKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGK--KEKIASSQGMLVVSDVSKDG 244 (419)
T ss_pred ceEEEECCCCCc-eeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCc--EEEEecCCCcEEeeEECCCC
Confidence 355565654333 33333333 6677888 465 3554333 3569999998764 23333355556678899999
Q ss_pred CEEEEEe-C--CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEE
Q psy4876 431 RYLASGG-N--DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSI 507 (609)
Q Consensus 431 ~~lasgs-~--Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~ 507 (609)
+.++... . +..|+++|+..+ . ...+..+........|+|||..++.+........|+++|+.+++.....
T Consensus 245 ~~la~~~~~~g~~~Iy~~dl~~g------~-~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt 317 (419)
T PRK04043 245 SKLLLTMAPKGQPDIYLYDTNTK------T-LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVV 317 (419)
T ss_pred CEEEEEEccCCCcEEEEEECCCC------c-EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCc
Confidence 8776543 2 356888898766 2 3344444433445689999988888763212237889999887764433
Q ss_pred cCCCCeEEEEEcCCCCeEEEEEecCC-------CeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC-C--C
Q psy4876 508 DTKSQVCALLWNSDYKELVSAHGFAQ-------NQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD-E--T 577 (609)
Q Consensus 508 ~~~~~v~sl~~s~~g~~l~~~sG~~d-------g~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D-g--~ 577 (609)
..... ...|+|+|+.++..+...+ ..|.+.|+.++.. ..+... .......|+|||+.|+..+.+ + .
T Consensus 318 ~~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~ 393 (419)
T PRK04043 318 FHGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSA 393 (419)
T ss_pred cCCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCCEEEEEEccCCcEE
Confidence 22222 3589999999988764321 4788889887754 334332 233468899999988766543 3 3
Q ss_pred EEEEEcCCCc
Q psy4876 578 LRLWKIFEKV 587 (609)
Q Consensus 578 I~iWdl~~~~ 587 (609)
|.+.++....
T Consensus 394 L~~~~l~g~~ 403 (419)
T PRK04043 394 LGIIRLNYNK 403 (419)
T ss_pred EEEEecCCCe
Confidence 5566665543
No 282
>KOG1912|consensus
Probab=98.91 E-value=1.7e-07 Score=101.02 Aligned_cols=242 Identities=14% Similarity=0.251 Sum_probs=177.9
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecC--------------CEEEEEecCCeEE
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT--------------YILSSGSRCGNIV 400 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~--------------~~L~sgs~dg~I~ 400 (609)
...-.++.|+|.| +||.|+. ..|.|-|..+-+.++.+..|...|+.+.|.+ -+|+++...|.|.
T Consensus 15 ~sN~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi 92 (1062)
T KOG1912|consen 15 RSNRNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII 92 (1062)
T ss_pred cccccccccCccc-eEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE
Confidence 3446688999987 6777776 5799999999999999999999999999921 2677888899999
Q ss_pred EEEcCCCCeeEEEEccCCCCeEEEEEcc---CC-CEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcC
Q psy4876 401 HHDVRSRDHKVALLQNHTQEVCGLKWSP---DG-RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCP 476 (609)
Q Consensus 401 iwd~~~~~~~~~~~~~h~~~V~~l~~sp---dg-~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 476 (609)
+||+..+. .+..+..|..++..++|-+ +. ..|+.-.....|.+|+..+| +.+.+.........|+.+.|
T Consensus 93 l~d~~~~s-~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG------~k~Wk~~ys~~iLs~f~~DP 165 (1062)
T KOG1912|consen 93 LVDFVLAS-VINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTG------EKFWKYDYSHEILSCFRVDP 165 (1062)
T ss_pred EEEehhhh-hhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCC------ceeeccccCCcceeeeeeCC
Confidence 99999873 5667778889999999977 33 45666677789999999999 66666666666778899999
Q ss_pred CCCcEEEEEeccCCCeEEEEECCC-------CceeEEEcCCC--------------------------CeEEEEEcCCCC
Q psy4876 477 WSPNVLASGGGTADRHIYFWNVSS-------GACLDSIDTKS--------------------------QVCALLWNSDYK 523 (609)
Q Consensus 477 ~~~~llasggGs~Dg~I~iwd~~t-------~~~~~~~~~~~--------------------------~v~sl~~s~~g~ 523 (609)
....-+..-| ..|.+.+-+.-. |+..+.-..++ -...++|+|..+
T Consensus 166 fd~rh~~~l~--s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~r 243 (1062)
T KOG1912|consen 166 FDSRHFCVLG--SKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWR 243 (1062)
T ss_pred CCcceEEEEc--cCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhh
Confidence 7655444332 466666655421 11111111100 022467788887
Q ss_pred eEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCC--CEEEEEECCCCEEEEEcCCCccc
Q psy4876 524 ELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDE--TTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 524 ~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg--~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
.++... -...+.|+|++-..++....-..+.+.-+.|-|++ ..|++.-.||.+.||.-.....+
T Consensus 244 n~lfi~--~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~ 309 (1062)
T KOG1912|consen 244 NILFIT--FPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTE 309 (1062)
T ss_pred ceEEEE--eccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCcc
Confidence 776654 57889999999888888877666777777887765 48999999999999987664433
No 283
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.89 E-value=8.8e-07 Score=95.11 Aligned_cols=179 Identities=12% Similarity=0.041 Sum_probs=116.6
Q ss_pred CeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCE-EEEEeCC---CcEEEEeCCCCCCCCCccceEeecCCcccEEEE
Q psy4876 397 GNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRY-LASGGND---NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI 472 (609)
Q Consensus 397 g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~-lasgs~D---g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l 472 (609)
..|.+-|.+... .+.+.... .+....|+|||+. ++..+.+ ..|+++|+.+++ . ..+....+.+...
T Consensus 169 ~~l~~~d~dg~~--~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~------~-~~lt~~~g~~~~~ 238 (419)
T PRK04043 169 SNIVLADYTLTY--QKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGK------K-EKIASSQGMLVVS 238 (419)
T ss_pred ceEEEECCCCCc--eeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCc------E-EEEecCCCcEEee
Confidence 356666665543 23233233 7788999999985 6654443 469999998772 2 2333345556678
Q ss_pred EEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCC-CeEEEEECCCCceEEEEe
Q psy4876 473 AWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQ-NQLIIWKYPSLVKVAELH 551 (609)
Q Consensus 473 ~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~d-g~I~Iwd~~~~~~~~~l~ 551 (609)
.|+|||..++++.....+..|+++|+.+++...............|+|||+.|+..+...+ ..|+++|+.+++......
T Consensus 239 ~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~ 318 (419)
T PRK04043 239 DVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF 318 (419)
T ss_pred EECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc
Confidence 8999998887765423356899999988875443333333456789999999988763222 268888988776533322
Q ss_pred CCCCCEEEEEEeCCCCEEEEEECC---------CCEEEEEcCCCcc
Q psy4876 552 GHSARVLNLAMSPDETTVLSAGAD---------ETLRLWKIFEKVK 588 (609)
Q Consensus 552 ~h~~~V~~l~~spdg~~L~s~s~D---------g~I~iWdl~~~~~ 588 (609)
. .. ....|+|||+.|+..+.. ..|.+.|+.++..
T Consensus 319 ~-g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~ 361 (419)
T PRK04043 319 H-GK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI 361 (419)
T ss_pred C-CC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe
Confidence 1 11 124899999988876654 2577778877653
No 284
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.89 E-value=6e-06 Score=82.36 Aligned_cols=217 Identities=15% Similarity=0.168 Sum_probs=144.0
Q ss_pred EEEEcc-CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCee-EEEEc
Q psy4876 340 SVAWIQ-EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHK-VALLQ 415 (609)
Q Consensus 340 ~v~~sp-dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~-~~~~~ 415 (609)
++.|.+ ++.++++-...+.|..|+..++.... +.... ...+.++ +..|+.+...+ +.++|..++... +....
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~ 79 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVADSGG-IAVVDPDTGKVTVLADLP 79 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEETTC-EEEEETTTTEEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEEcCc-eEEEecCCCcEEEEeecc
Confidence 678998 67777777778999999998876543 22222 4455553 56666666654 455598876321 11221
Q ss_pred --c-CCCCeEEEEEccCCCEEEEEeCC--------CcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEE
Q psy4876 416 --N-HTQEVCGLKWSPDGRYLASGGND--------NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLAS 484 (609)
Q Consensus 416 --~-h~~~V~~l~~spdg~~lasgs~D--------g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llas 484 (609)
. .....+.+++.++|++.++.... |.|+.++.. + + +..+...-.....|+|+|+++.|+++
T Consensus 80 ~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~------~-~~~~~~~~~~pNGi~~s~dg~~lyv~ 151 (246)
T PF08450_consen 80 DGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-G------K-VTVVADGLGFPNGIAFSPDGKTLYVA 151 (246)
T ss_dssp TTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-S------E-EEEEEEEESSEEEEEEETTSSEEEEE
T ss_pred CCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-C------e-EEEEecCcccccceEECCcchheeec
Confidence 1 34568899999999977776543 558888877 4 2 22223334567899999999877776
Q ss_pred EeccCCCeEEEEECCCCce-e---EEE---cCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCC
Q psy4876 485 GGGTADRHIYFWNVSSGAC-L---DSI---DTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSAR 556 (609)
Q Consensus 485 ggGs~Dg~I~iwd~~t~~~-~---~~~---~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~ 556 (609)
- +..+.|..|++..... + ..+ ... .....+++..+|+..++. ...+.|.+++.. ++.+..+......
T Consensus 152 d--s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~--~~~~~I~~~~p~-G~~~~~i~~p~~~ 226 (246)
T PF08450_consen 152 D--SFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVAD--WGGGRIVVFDPD-GKLLREIELPVPR 226 (246)
T ss_dssp E--TTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEE--ETTTEEEEEETT-SCEEEEEE-SSSS
T ss_pred c--cccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEE--cCCCEEEEECCC-ccEEEEEcCCCCC
Confidence 5 4788999999863221 1 122 222 247899999999877764 478999999976 8888888766668
Q ss_pred EEEEEEe-CCCCEEEEEE
Q psy4876 557 VLNLAMS-PDETTVLSAG 573 (609)
Q Consensus 557 V~~l~~s-pdg~~L~s~s 573 (609)
+++++|. ++...|+..+
T Consensus 227 ~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 227 PTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEEEESTTSSEEEEEE
T ss_pred EEEEEEECCCCCEEEEEe
Confidence 9999994 6766665543
No 285
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.89 E-value=2.5e-06 Score=85.42 Aligned_cols=224 Identities=12% Similarity=0.208 Sum_probs=153.2
Q ss_pred CeEEEEeCCCCe-e--EEEecCCCCceEEEEec--CCEEEEEec---CCeEEEEEcCCCCeeEEEE---ccCCCCeEEEE
Q psy4876 357 GTVQLWDVSAKK-K--CRTMDGHDVRVGALAWN--TYILSSGSR---CGNIVHHDVRSRDHKVALL---QNHTQEVCGLK 425 (609)
Q Consensus 357 g~I~iwd~~~~~-~--~~~l~~h~~~V~~l~~~--~~~L~sgs~---dg~I~iwd~~~~~~~~~~~---~~h~~~V~~l~ 425 (609)
.-|.+|++.+.. . ...+-.+....+-|+|+ .+.|.++-. +|.|..|.++.....+..+ ......-+.++
T Consensus 16 ~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvs 95 (346)
T COG2706 16 QGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVS 95 (346)
T ss_pred CceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEE
Confidence 569999987432 1 12223466777888885 556877755 4678888777532122222 22334458899
Q ss_pred EccCCCEEEEEeC-CCcEEEEeCCCCCCCCCccceEeecCCccc----------EEEEEEcCCCCcEEEEEeccCCCeEE
Q psy4876 426 WSPDGRYLASGGN-DNLLNIWSGVPGQHTFSTQPIHSLSRHQAA----------VKAIAWCPWSPNVLASGGGTADRHIY 494 (609)
Q Consensus 426 ~spdg~~lasgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~----------V~~l~~sp~~~~llasggGs~Dg~I~ 494 (609)
++++|++++++.. -|.|.++-++..... .....+..|.+. +....+.|+++.++++.- .-.+|.
T Consensus 96 vd~~g~~vf~AnY~~g~v~v~p~~~dG~l---~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL--G~Dri~ 170 (346)
T COG2706 96 VDEDGRFVFVANYHSGSVSVYPLQADGSL---QPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL--GTDRIF 170 (346)
T ss_pred ECCCCCEEEEEEccCceEEEEEcccCCcc---ccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec--CCceEE
Confidence 9999999988875 578999998763211 222223334444 788999999987777754 356799
Q ss_pred EEECCCCceeE----EEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC-ceEEEEeCC---------CCCEEEE
Q psy4876 495 FWNVSSGACLD----SIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL-VKVAELHGH---------SARVLNL 560 (609)
Q Consensus 495 iwd~~t~~~~~----~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~-~~~~~l~~h---------~~~V~~l 560 (609)
+|++..|.... .+..+...+.|.|+|++++.++.+ .-+++|.+|.+... ..+..++.+ ..+...|
T Consensus 171 ~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~-EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaI 249 (346)
T COG2706 171 LYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVN-ELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAI 249 (346)
T ss_pred EEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEe-ccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEE
Confidence 99999776532 234566899999999999999885 47999999999763 344444322 2457788
Q ss_pred EEeCCCCEEEEEEC-CCCEEEEEcCCC
Q psy4876 561 AMSPDETTVLSAGA-DETLRLWKIFEK 586 (609)
Q Consensus 561 ~~spdg~~L~s~s~-Dg~I~iWdl~~~ 586 (609)
.+++||++|+++.. ...|.+|.+...
T Consensus 250 his~dGrFLYasNRg~dsI~~f~V~~~ 276 (346)
T COG2706 250 HISPDGRFLYASNRGHDSIAVFSVDPD 276 (346)
T ss_pred EECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 99999999987743 347888887764
No 286
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.85 E-value=3.9e-06 Score=99.80 Aligned_cols=202 Identities=10% Similarity=0.079 Sum_probs=130.5
Q ss_pred CeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCeeEEEecCC-----------------CCceEEEEec---CCEEEEEec
Q psy4876 337 NVCSVAWIQEGYMLGVGT-SLGTVQLWDVSAKKKCRTMDGH-----------------DVRVGALAWN---TYILSSGSR 395 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs-~dg~I~iwd~~~~~~~~~l~~h-----------------~~~V~~l~~~---~~~L~sgs~ 395 (609)
....|++.++++.|+++. .++.|+++|..++. +.++.+. -..-..++++ +.++++.+.
T Consensus 625 ~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~ 703 (1057)
T PLN02919 625 RPQGLAYNAKKNLLYVADTENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG 703 (1057)
T ss_pred CCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC
Confidence 467899999988766654 45689999987754 3333210 0123467774 456677778
Q ss_pred CCeEEEEEcCCCCeeEEEEccC---------------CCCeEEEEEccCCCEE-EEEeCCCcEEEEeCCCCCCCCC----
Q psy4876 396 CGNIVHHDVRSRDHKVALLQNH---------------TQEVCGLKWSPDGRYL-ASGGNDNLLNIWSGVPGQHTFS---- 455 (609)
Q Consensus 396 dg~I~iwd~~~~~~~~~~~~~h---------------~~~V~~l~~spdg~~l-asgs~Dg~I~iwd~~~~~~~~~---- 455 (609)
++.|++||..++. +..+.+. -....+|+|+|+|.+| ++-+.++.|++||+.++.....
T Consensus 704 ~~~I~v~d~~~g~--v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~ 781 (1057)
T PLN02919 704 QHQIWEYNISDGV--TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGD 781 (1057)
T ss_pred CCeEEEEECCCCe--EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecc
Confidence 8899999987653 2222111 1245679999999854 4555678999999987531000
Q ss_pred ---ccceEeecCC--------cccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC--------------
Q psy4876 456 ---TQPIHSLSRH--------QAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK-------------- 510 (609)
Q Consensus 456 ---~~~~~~~~~h--------~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~-------------- 510 (609)
......+..+ -.....++++++|. ++++. +.++.|++||..++.........
T Consensus 782 ~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVAD--s~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l 858 (1057)
T PLN02919 782 PTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVAD--SYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQL 858 (1057)
T ss_pred cccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEEE--CCCCEEEEEECCCCeEEEEeccCCcCCCCCccccccc
Confidence 0000011000 11235889999885 66665 47899999999887765433211
Q ss_pred CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCce
Q psy4876 511 SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVK 546 (609)
Q Consensus 511 ~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~ 546 (609)
.....++++++|+.+++ ...++.|++||+.+++.
T Consensus 859 ~~P~GIavd~dG~lyVa--Dt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 859 SEPAGLALGENGRLFVA--DTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCceEEEEeCCCCEEEE--ECCCCEEEEEECCCCcc
Confidence 24678999999986665 45799999999988754
No 287
>KOG4532|consensus
Probab=98.82 E-value=1.2e-06 Score=84.10 Aligned_cols=225 Identities=12% Similarity=0.007 Sum_probs=148.2
Q ss_pred CCEEEEEeCCCeEEEEeCCCCe-eEEEecCCCCceEE---EEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCC--C
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKK-KCRTMDGHDVRVGA---LAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQ--E 420 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~-~~~~l~~h~~~V~~---l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~--~ 420 (609)
..+||.|+..|...+|...+.+ .......|...|.- .+-...-+..++.|.++++.++..+.... ..|.. .
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~---~~h~~~~~ 160 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKF---AVHNQNLT 160 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccc---eeeccccc
Confidence 4689999999999999998643 34444444443332 22234456667778888888776543111 12333 3
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceE-eecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIH-SLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS 499 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~-~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~ 499 (609)
+.++.+++|++++++.+....|..|.+..... ..+. ........-.+..|+... ..+|++ +.||.+.|||++
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~se----y~~~~~~a~t~D~gF~~S~s~~~-~~FAv~--~Qdg~~~I~DVR 233 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESE----YIENIYEAPTSDHGFYNSFSEND-LQFAVV--FQDGTCAIYDVR 233 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCccc----eeeeeEecccCCCceeeeeccCc-ceEEEE--ecCCcEEEEEec
Confidence 88999999999999999999999999886532 1222 222233444678888765 567776 599999999999
Q ss_pred CCceeE-EE-----cCCCCeEEEEEcCCCCe--EEEEEecCCCeEEEEECCCCceEEEEe-------CCCC-CEEEEEEe
Q psy4876 500 SGACLD-SI-----DTKSQVCALLWNSDYKE--LVSAHGFAQNQLIIWKYPSLVKVAELH-------GHSA-RVLNLAMS 563 (609)
Q Consensus 500 t~~~~~-~~-----~~~~~v~sl~~s~~g~~--l~~~sG~~dg~I~Iwd~~~~~~~~~l~-------~h~~-~V~~l~~s 563 (609)
...... .. .+.+.+..+.|++.|.. |+. ...-+.+.+.|++++.....+. .|.. .|..-.|+
T Consensus 234 ~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~--sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~ 311 (344)
T KOG4532|consen 234 NMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFI--SEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFN 311 (344)
T ss_pred ccccchhhhcccCCCCCCceEEEEecCCCcceEEEE--ecCcceEEEEEcccCceeeEEecCcccccccccccccccccc
Confidence 654332 22 24468999999986643 333 3357889999999887655442 2332 37788888
Q ss_pred CCCCEEEEEECCCCEEEEEcC
Q psy4876 564 PDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 564 pdg~~L~s~s~Dg~I~iWdl~ 584 (609)
.++..+.+.+++ .+.=|++.
T Consensus 312 ~~n~s~~v~~e~-~~ae~ni~ 331 (344)
T KOG4532|consen 312 NENESNDVKNEL-QGAEYNIL 331 (344)
T ss_pred CCCcccccccch-hhheeecc
Confidence 888777777665 34445553
No 288
>KOG4532|consensus
Probab=98.80 E-value=2.2e-06 Score=82.27 Aligned_cols=227 Identities=10% Similarity=0.055 Sum_probs=145.7
Q ss_pred EEEEecCC------CeE-EEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEcc
Q psy4876 273 NLIDWSHF------NVL-AVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQ 345 (609)
Q Consensus 273 ~~l~wsp~------~ll-a~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~sp 345 (609)
..|+|-|. +.| ++|.-|...+|...+.+ ....++.. +...|+-+.=..
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~------------------------~h~~~cd~-snn~v~~~~r~c 125 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTND------------------------GHLYQCDV-SNNDVTLVKRYC 125 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCcc------------------------cceeeecc-cccchhhhhhhc
Confidence 55777663 344 46688999999998721 11222222 333222222111
Q ss_pred C-CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEE--EEccCCCC
Q psy4876 346 E-GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVA--LLQNHTQE 420 (609)
Q Consensus 346 d-g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~--~~~~h~~~ 420 (609)
+ ...+..++.|.++++.+++-+.....+....-.+.+++. ++.++++.++...|..|.++.....+. .....++.
T Consensus 126 d~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~ 205 (344)
T KOG4532|consen 126 DLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDH 205 (344)
T ss_pred ccccceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCC
Confidence 2 234566888888888888755433333222233666777 689999999999999999986543332 23344455
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCc--EEEEEeccCCCeEEEEEC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPN--VLASGGGTADRHIYFWNV 498 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~--llasggGs~Dg~I~iwd~ 498 (609)
-.+..|+.....+|++.+||++.|||++.......... .+-..|.+++..+.|++.|.. |+.+- .-+.+.+.|+
T Consensus 206 gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~s-strp~hnGa~R~c~Fsl~g~lDLLf~sE---hfs~~hv~D~ 281 (344)
T KOG4532|consen 206 GFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEIS-STRPHHNGAFRVCRFSLYGLLDLLFISE---HFSRVHVVDT 281 (344)
T ss_pred ceeeeeccCcceEEEEecCCcEEEEEecccccchhhhc-ccCCCCCCceEEEEecCCCcceEEEEec---CcceEEEEEc
Confidence 66789999999999999999999999997643221111 122348999999999986643 34442 4688999999
Q ss_pred CCCceeEEEcC--------CC-CeEEEEEcCCCCeEEEE
Q psy4876 499 SSGACLDSIDT--------KS-QVCALLWNSDYKELVSA 528 (609)
Q Consensus 499 ~t~~~~~~~~~--------~~-~v~sl~~s~~g~~l~~~ 528 (609)
+++...+.+.. .. .+..-.|+.++..+.+.
T Consensus 282 R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~ 320 (344)
T KOG4532|consen 282 RNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVK 320 (344)
T ss_pred ccCceeeEEecCccccccccccccccccccCCCcccccc
Confidence 99886655432 22 26667777777666653
No 289
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.77 E-value=4.1e-06 Score=86.06 Aligned_cols=145 Identities=10% Similarity=0.108 Sum_probs=112.0
Q ss_pred EecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEeC
Q psy4876 276 DWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTS 355 (609)
Q Consensus 276 ~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~ 355 (609)
+..+.+++|.-+-|...|.+... + ....+.+.+.|.-..+.-+++-++.|..
T Consensus 328 a~~~Gd~ia~VSRGkaFi~~~~~-------------------------~---~~iqv~~~~~VrY~r~~~~~e~~vigt~ 379 (668)
T COG4946 328 AVVNGDYIALVSRGKAFIMRPWD-------------------------G---YSIQVGKKGGVRYRRIQVDPEGDVIGTN 379 (668)
T ss_pred ccCCCcEEEEEecCcEEEECCCC-------------------------C---eeEEcCCCCceEEEEEccCCcceEEecc
Confidence 33445577766677777776554 2 2334456777888888888889999999
Q ss_pred CC-eEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCE
Q psy4876 356 LG-TVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRY 432 (609)
Q Consensus 356 dg-~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 432 (609)
|| .+-|+|..+++. ..+...-+.|.++.. +|..++.+.....|.+.|++++. ....-+...+-|+.++|||++++
T Consensus 380 dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn-v~~idkS~~~lItdf~~~~nsr~ 457 (668)
T COG4946 380 DGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN-VRLIDKSEYGLITDFDWHPNSRW 457 (668)
T ss_pred CCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC-eeEecccccceeEEEEEcCCcee
Confidence 99 899999987664 445556788888888 67889999999999999999984 33444456678999999999999
Q ss_pred EEEEeCCC----cEEEEeCCCC
Q psy4876 433 LASGGNDN----LLNIWSGVPG 450 (609)
Q Consensus 433 lasgs~Dg----~I~iwd~~~~ 450 (609)
||.+--+| .|+++|+..+
T Consensus 458 iAYafP~gy~tq~Iklydm~~~ 479 (668)
T COG4946 458 IAYAFPEGYYTQSIKLYDMDGG 479 (668)
T ss_pred EEEecCcceeeeeEEEEecCCC
Confidence 99987665 5899998876
No 290
>KOG3914|consensus
Probab=98.74 E-value=1.5e-07 Score=94.86 Aligned_cols=168 Identities=17% Similarity=0.226 Sum_probs=121.6
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t 500 (609)
+..+..++++++||++..+....+++...... ..+++...... ..-+++.|..+....+++-.......+.+|....
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~--~~kl~~~~~v~-~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~ 141 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPK--GAKLLDVSCVP-KRPTAISFIREDTSVLVADKAGDVYSFDILSADS 141 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCC--cceeeeEeecc-cCcceeeeeeccceEEEEeecCCceeeeeecccc
Confidence 34456778899999998888887888775421 11233322222 2234555555555555543222567777887777
Q ss_pred CceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEE-eCCCCCEEEEEEeCCCCEEEEEECCCCEE
Q psy4876 501 GACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL-HGHSARVLNLAMSPDETTVLSAGADETLR 579 (609)
Q Consensus 501 ~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l-~~h~~~V~~l~~spdg~~L~s~s~Dg~I~ 579 (609)
+.+...+-+-+.+..++|+||++.++++ ..|..|+|-.++....+..+ -||..-|..++.-++ ..|+++|.|++|+
T Consensus 142 ~~~~~~lGhvSml~dVavS~D~~~Iita--DRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr 218 (390)
T KOG3914|consen 142 GRCEPILGHVSMLLDVAVSPDDQFIITA--DRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLR 218 (390)
T ss_pred cCcchhhhhhhhhheeeecCCCCEEEEe--cCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEE
Confidence 7777777777899999999999999995 48999999999877777666 479999999998755 4599999999999
Q ss_pred EEEcCCCccchhhhh
Q psy4876 580 LWKIFEKVKSKKKEI 594 (609)
Q Consensus 580 iWdl~~~~~~~k~~~ 594 (609)
+||+..+........
T Consensus 219 ~Wd~~sgk~L~t~dl 233 (390)
T KOG3914|consen 219 LWDITSGKLLDTCDL 233 (390)
T ss_pred EEecccCCcccccch
Confidence 999999987754443
No 291
>KOG1832|consensus
Probab=98.73 E-value=6.3e-09 Score=112.94 Aligned_cols=217 Identities=12% Similarity=0.176 Sum_probs=155.2
Q ss_pred eeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCC--eEEE
Q psy4876 327 DHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCG--NIVH 401 (609)
Q Consensus 327 ~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg--~I~i 401 (609)
.....+. |+...+|++|+-+.++|++|+-.|.|++|++.+|.......+|...|+.+.. +|..+++.+... -..+
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHH
Confidence 3344455 7889999999999999999999999999999999999999999999999988 676655554333 4678
Q ss_pred EEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEee-c---CCcccEEEEEEcCC
Q psy4876 402 HDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL-S---RHQAAVKAIAWCPW 477 (609)
Q Consensus 402 wd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~-~---~h~~~V~~l~~sp~ 477 (609)
|+........+.+. +-.++.|+..-..-+.|+......|||+.++ .++.++ . +....-.+..|+|+
T Consensus 1172 W~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~------~~l~tylt~~~~~~y~~n~a~FsP~ 1241 (1516)
T KOG1832|consen 1172 WDASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTC------SPLQTYLTDTVTSSYSNNLAHFSPC 1241 (1516)
T ss_pred hccccccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccC------cHHHHhcCcchhhhhhccccccCCC
Confidence 99876544444443 3457889876555566666677899999998 344432 1 12223367889998
Q ss_pred CCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCE
Q psy4876 478 SPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARV 557 (609)
Q Consensus 478 ~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V 557 (609)
.. |+. .|| .+||++..+.++.|+.-..-..=.|+|+|..++.-+ .|||+++.+.+.....-. -
T Consensus 1242 D~-LIl-----ndG--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINS-------EIwD~RTF~lLh~VP~Ld--q 1304 (1516)
T KOG1832|consen 1242 DT-LIL-----NDG--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINS-------EIWDMRTFKLLHSVPSLD--Q 1304 (1516)
T ss_pred cc-eEe-----eCc--eeeeeccHHHHhhhhhheecccccccCCCceEEeec-------hhhhhHHHHHHhcCcccc--c
Confidence 74 554 355 579999888888776555444557999999998843 599999887766554321 2
Q ss_pred EEEEEeCCCCEEE
Q psy4876 558 LNLAMSPDETTVL 570 (609)
Q Consensus 558 ~~l~~spdg~~L~ 570 (609)
..+.|+..|..++
T Consensus 1305 c~VtFNstG~VmY 1317 (1516)
T KOG1832|consen 1305 CAVTFNSTGDVMY 1317 (1516)
T ss_pred eEEEeccCccchh
Confidence 4456666665444
No 292
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.71 E-value=9.3e-06 Score=80.18 Aligned_cols=214 Identities=14% Similarity=0.050 Sum_probs=134.2
Q ss_pred CCeEEEEeCCCCeeEEEecCC--CCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCE
Q psy4876 356 LGTVQLWDVSAKKKCRTMDGH--DVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRY 432 (609)
Q Consensus 356 dg~I~iwd~~~~~~~~~l~~h--~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~ 432 (609)
+|.|..||..+|+.+...... .....+... ++..+++++.++.|..||..++. .+..... ...+.... ..++..
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~-~~W~~~~-~~~~~~~~-~~~~~~ 78 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGK-VLWRFDL-PGPISGAP-VVDGGR 78 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSE-EEEEEEC-SSCGGSGE-EEETTE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCC-EEEEeec-ccccccee-eecccc
Confidence 689999999999988877531 122222233 67778888999999999998874 5555543 22222111 224556
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCCccceEee-cCCc---ccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc
Q psy4876 433 LASGGNDNLLNIWSGVPGQHTFSTQPIHSL-SRHQ---AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID 508 (609)
Q Consensus 433 lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~-~~h~---~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~ 508 (609)
+++++.|+.|+.+|..++ +.+... .... ...........+..+++.. .++.|..+|+.+|+.+....
T Consensus 79 v~v~~~~~~l~~~d~~tG------~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~l~~~d~~tG~~~w~~~ 149 (238)
T PF13360_consen 79 VYVGTSDGSLYALDAKTG------KVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGT---SSGKLVALDPKTGKLLWKYP 149 (238)
T ss_dssp EEEEETTSEEEEEETTTS------CEEEEEEE-SSCTCSTB--SEEEEETTEEEEEE---TCSEEEEEETTTTEEEEEEE
T ss_pred cccccceeeeEecccCCc------ceeeeeccccccccccccccCceEecCEEEEEe---ccCcEEEEecCCCcEEEEee
Confidence 777778899999999998 444442 2110 1111222222244455443 58999999999999988776
Q ss_pred CCC-C----------eEEEEEcCCCCeEEEEEecCCCe-EEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCC
Q psy4876 509 TKS-Q----------VCALLWNSDYKELVSAHGFAQNQ-LIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADE 576 (609)
Q Consensus 509 ~~~-~----------v~sl~~s~~g~~l~~~sG~~dg~-I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg 576 (609)
... . +..-....++ .++++. .++. +.+ |..+++.+.... ...+.. ....++..|+.++.|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~--~~g~~~~~-d~~tg~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~ 222 (238)
T PF13360_consen 150 VGEPRGSSPISSFSDINGSPVISDG-RVYVSS--GDGRVVAV-DLATGEKLWSKP--ISGIYS-LPSVDGGTLYVTSSDG 222 (238)
T ss_dssp SSTT-SS--EEEETTEEEEEECCTT-EEEEEC--CTSSEEEE-ETTTTEEEEEEC--SS-ECE-CEECCCTEEEEEETTT
T ss_pred cCCCCCCcceeeecccccceEEECC-EEEEEc--CCCeEEEE-ECCCCCEEEEec--CCCccC-CceeeCCEEEEEeCCC
Confidence 532 1 1122222344 555533 4564 555 999999775333 222332 1456788888888999
Q ss_pred CEEEEEcCCCcc
Q psy4876 577 TLRLWKIFEKVK 588 (609)
Q Consensus 577 ~I~iWdl~~~~~ 588 (609)
.|..||+.+++.
T Consensus 223 ~l~~~d~~tG~~ 234 (238)
T PF13360_consen 223 RLYALDLKTGKV 234 (238)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEECCCCCE
Confidence 999999998864
No 293
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.71 E-value=2.2e-05 Score=77.51 Aligned_cols=189 Identities=15% Similarity=0.083 Sum_probs=121.8
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEE-EccCC---CC
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVAL-LQNHT---QE 420 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~-~~~h~---~~ 420 (609)
+++..+++++.++.|..||..+|+.+...............++..++.++.++.|..+|..++. .+.. ..... ..
T Consensus 34 ~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~-~~W~~~~~~~~~~~~ 112 (238)
T PF13360_consen 34 PDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSDGSLYALDAKTGK-VLWSIYLTSSPPAGV 112 (238)
T ss_dssp EETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEEEETTSEEEEEETTTSC-EEEEEEE-SSCTCST
T ss_pred EeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecccccccccceeeeEecccCCcc-eeeeecccccccccc
Confidence 3567788888999999999999998887765222122234467777777788999999998885 4444 23221 11
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCccc----------EEEEEEcCCCCcEEEEEeccCC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA----------VKAIAWCPWSPNVLASGGGTAD 490 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~----------V~~l~~sp~~~~llasggGs~D 490 (609)
........++..++++..++.|..+|+.+| +.+......... +..-....++ .++++. .+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~---~~ 182 (238)
T PF13360_consen 113 RSSSSPAVDGDRLYVGTSSGKLVALDPKTG------KLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSS---GD 182 (238)
T ss_dssp B--SEEEEETTEEEEEETCSEEEEEETTTT------EEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEEC---CT
T ss_pred ccccCceEecCEEEEEeccCcEEEEecCCC------cEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEc---CC
Confidence 222233334788888888999999999999 555544432211 1222222234 555553 46
Q ss_pred Ce-EEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEE
Q psy4876 491 RH-IYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAE 549 (609)
Q Consensus 491 g~-I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~ 549 (609)
+. +.+ |+.+++.+.... ...+.. ....++..+++.+ .++.|..||..+++.+..
T Consensus 183 g~~~~~-d~~tg~~~w~~~-~~~~~~-~~~~~~~~l~~~~--~~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 183 GRVVAV-DLATGEKLWSKP-ISGIYS-LPSVDGGTLYVTS--SDGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp SSEEEE-ETTTTEEEEEEC-SS-ECE-CEECCCTEEEEEE--TTTEEEEEETTTTEEEEE
T ss_pred CeEEEE-ECCCCCEEEEec-CCCccC-CceeeCCEEEEEe--CCCEEEEEECCCCCEEeE
Confidence 64 555 999999765443 223322 2456777777754 799999999999987643
No 294
>KOG1409|consensus
Probab=98.70 E-value=1.3e-06 Score=86.48 Aligned_cols=249 Identities=16% Similarity=0.238 Sum_probs=173.4
Q ss_pred eeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCC-CCeeEEEec-CCCCceEEEEec--CCEEEEEecCCeEE
Q psy4876 326 IDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVS-AKKKCRTMD-GHDVRVGALAWN--TYILSSGSRCGNIV 400 (609)
Q Consensus 326 ~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~-~~~~~~~l~-~h~~~V~~l~~~--~~~L~sgs~dg~I~ 400 (609)
...+..++ +.+.|++...-|...-+++.+.|.+++||--. .++.-..+. ....+++++.+. ...|++|-..|++.
T Consensus 14 p~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvt 93 (404)
T KOG1409|consen 14 PELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVT 93 (404)
T ss_pred hhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEE
Confidence 34455555 77888888888888889999999999999543 444433332 235678888884 57899999999998
Q ss_pred EEEcCCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCC
Q psy4876 401 HHDVRSRD---HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPW 477 (609)
Q Consensus 401 iwd~~~~~---~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~ 477 (609)
-+.+...- ...+....|...|..+.|+-...++++.+.|..+.---.+.+.... -+.+.. .-.++.+.-.
T Consensus 94 efs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg----~Y~~~~---~~t~~~~d~~ 166 (404)
T KOG1409|consen 94 EFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLG----GYNFET---PASALQFDAL 166 (404)
T ss_pred EEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCccc----ceEeec---cCCCCceeeE
Confidence 88665321 2445566899999999999999999999999877654444442110 001110 0011111110
Q ss_pred CCcEEEEEeccCCCeEEEEECC--CCceeEEEcCC-CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCc-eEEEEeCC
Q psy4876 478 SPNVLASGGGTADRHIYFWNVS--SGACLDSIDTK-SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLV-KVAELHGH 553 (609)
Q Consensus 478 ~~~llasggGs~Dg~I~iwd~~--t~~~~~~~~~~-~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~-~~~~l~~h 553 (609)
.... |...+.|....+. .-..+..+..+ ..+.++.|.+....+++ |..|..+.+||+.-.+ ...++.+|
T Consensus 167 ---~~fv--Gd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfS--g~~d~~vi~wdigg~~g~~~el~gh 239 (404)
T KOG1409|consen 167 ---YAFV--GDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFS--GASDHSVIMWDIGGRKGTAYELQGH 239 (404)
T ss_pred ---EEEe--cccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEe--ccccCceEEEeccCCcceeeeeccc
Confidence 1122 2355555554443 33455556555 58999999999999999 6689999999997654 34577899
Q ss_pred CCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 554 SARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 554 ~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
...|..++.-+--+.|++++.||.|.+|+......
T Consensus 240 ~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 240 NDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred hhhhhhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence 99999999888888999999999999999876543
No 295
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.69 E-value=3.6e-05 Score=76.69 Aligned_cols=218 Identities=17% Similarity=0.166 Sum_probs=139.8
Q ss_pred EEEecC-CC-eEEEE-cCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEc-cCCCE
Q psy4876 274 LIDWSH-FN-VLAVA-LGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWI-QEGYM 349 (609)
Q Consensus 274 ~l~wsp-~~-lla~s-~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~s-pdg~~ 349 (609)
++.|.+ ++ ++.+. ..+.|+.|+..+ +.... ..+ .. ...+++. +++ .
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~-------------------------~~~~~-~~~--~~-~~G~~~~~~~g-~ 53 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDT-------------------------GEVEV-IDL--PG-PNGMAFDRPDG-R 53 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTT-------------------------TEEEE-EES--SS-EEEEEEECTTS-E
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCC-------------------------CeEEE-Eec--CC-CceEEEEccCC-E
Confidence 467887 44 55555 478899999887 43322 222 22 7777887 564 5
Q ss_pred EEEEeCCCeEEEEeCCCCeeEEEecC-----CCCceEEEEe--cCCEEEEEecC--------CeEEEEEcCCCCeeEEEE
Q psy4876 350 LGVGTSLGTVQLWDVSAKKKCRTMDG-----HDVRVGALAW--NTYILSSGSRC--------GNIVHHDVRSRDHKVALL 414 (609)
Q Consensus 350 Lasgs~dg~I~iwd~~~~~~~~~l~~-----h~~~V~~l~~--~~~~L~sgs~d--------g~I~iwd~~~~~~~~~~~ 414 (609)
|+++...+ +.++|..+++....... .......+++ +|++.++.... |.|..++.. + . +..+
T Consensus 54 l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~-~-~~~~ 129 (246)
T PF08450_consen 54 LYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-G-K-VTVV 129 (246)
T ss_dssp EEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-S-E-EEEE
T ss_pred EEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-C-e-EEEE
Confidence 55566644 66669988865443332 3456778888 46766665543 567777776 3 2 3333
Q ss_pred ccCCCCeEEEEEccCCCEEE-EEeCCCcEEEEeCCCCCC-CCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCe
Q psy4876 415 QNHTQEVCGLKWSPDGRYLA-SGGNDNLLNIWSGVPGQH-TFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRH 492 (609)
Q Consensus 415 ~~h~~~V~~l~~spdg~~la-sgs~Dg~I~iwd~~~~~~-~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~ 492 (609)
...-...++|+|+|+++.|+ +-+..+.|..+++..... ....+....+....+..-.+++..+| +++++.. ..+.
T Consensus 130 ~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G-~l~va~~--~~~~ 206 (246)
T PF08450_consen 130 ADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDG-NLWVADW--GGGR 206 (246)
T ss_dssp EEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEE--TTTE
T ss_pred ecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCC-CEEEEEc--CCCE
Confidence 33345678999999999775 556678899999875421 11111222333333457889999988 4555542 5899
Q ss_pred EEEEECCCCceeEEEcCC-CCeEEEEEc-CCCCeEEEEE
Q psy4876 493 IYFWNVSSGACLDSIDTK-SQVCALLWN-SDYKELVSAH 529 (609)
Q Consensus 493 I~iwd~~t~~~~~~~~~~-~~v~sl~~s-~~g~~l~~~s 529 (609)
|.++|.. |+.+..+... ..+++++|. ++.+.|++.+
T Consensus 207 I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 207 IVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred EEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 9999987 9988888766 689999994 6777777654
No 296
>KOG1920|consensus
Probab=98.68 E-value=5.7e-06 Score=93.97 Aligned_cols=274 Identities=14% Similarity=0.223 Sum_probs=154.6
Q ss_pred eeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 270 YYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 270 ~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
..|.++.|-.+. ++.+..+|.|.+-|.++ ...+.+.. -+..|.+++|+||+
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et-------------------------~~~eivg~--vd~GI~aaswS~De 121 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPET-------------------------LELEIVGN--VDNGISAASWSPDE 121 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccc-------------------------cceeeeee--ccCceEEEeecCCC
Confidence 346778887764 77788889999998887 55444433 46889999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEec-----CCCCceEEEEecC-CEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCe
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMD-----GHDVRVGALAWNT-YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEV 421 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~-----~h~~~V~~l~~~~-~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V 421 (609)
..++..+..+++.+-+- +...+..-. ...+....+-|.. ..=+-|+ .|...-.+.............+.. =
T Consensus 122 e~l~liT~~~tll~mT~-~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs-~gr~~~~~~~~~ek~~~~~~~~~~-~ 198 (1265)
T KOG1920|consen 122 ELLALITGRQTLLFMTK-DFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGS-EGRQAARQKIEKEKALEQIEQDDH-K 198 (1265)
T ss_pred cEEEEEeCCcEEEEEec-cccchhccccccccccccccceecccccceeeecc-hhhhcccccccccccccchhhccC-C
Confidence 99999999887766432 222221111 1122333444521 1111221 122222111111111111112222 2
Q ss_pred EEEEEccCCCEEEEE-----eCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEE
Q psy4876 422 CGLKWSPDGRYLASG-----GNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFW 496 (609)
Q Consensus 422 ~~l~~spdg~~lasg-----s~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iw 496 (609)
..|.|--||+++|+. .....|+|||-+ +.. -..-....+--.+++|-|.|..+.+...-+.|+.|.+|
T Consensus 199 ~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~L------ns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~Ivff 271 (1265)
T KOG1920|consen 199 TSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GAL------NSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFF 271 (1265)
T ss_pred ceEEEccCCcEEEEEEEeccCCceeEEEeccc-chh------hcccCcccccccceeecCCCCeEeeeeecCCCCcEEEE
Confidence 468999999999983 223789999987 421 11111122233689999988655555544567789999
Q ss_pred ECCCCceeEEE----cCCC-CeEEEEEcCCCCeEEEEEecCCCe-EEEEECCCCc--eEEEEeCCCCCEEEEEEeCCC-C
Q psy4876 497 NVSSGACLDSI----DTKS-QVCALLWNSDYKELVSAHGFAQNQ-LIIWKYPSLV--KVAELHGHSARVLNLAMSPDE-T 567 (609)
Q Consensus 497 d~~t~~~~~~~----~~~~-~v~sl~~s~~g~~l~~~sG~~dg~-I~Iwd~~~~~--~~~~l~~h~~~V~~l~~spdg-~ 567 (609)
.-+ |-.-..+ .... .+..++|+.++..|++......+. |++|-..+.. ....+.-..... +.|+|-. .
T Consensus 272 ErN-GL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~ 348 (1265)
T KOG1920|consen 272 ERN-GLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEK 348 (1265)
T ss_pred ecC-CccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCce
Confidence 743 3333322 2233 489999999999998854444555 9999886643 222333222222 6676632 2
Q ss_pred EEEEEECCCCEEEEEc
Q psy4876 568 TVLSAGADETLRLWKI 583 (609)
Q Consensus 568 ~L~s~s~Dg~I~iWdl 583 (609)
.|..-..+|...++++
T Consensus 349 ~L~v~~~sG~~~v~~~ 364 (1265)
T KOG1920|consen 349 TLHVLRESGQRLVRDF 364 (1265)
T ss_pred eEEEEecCCcEEEEEE
Confidence 3333335555555444
No 297
>KOG0309|consensus
Probab=98.67 E-value=1.9e-07 Score=100.10 Aligned_cols=242 Identities=13% Similarity=0.242 Sum_probs=162.2
Q ss_pred ceeEEEEEecCC----CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEc
Q psy4876 269 DYYLNLIDWSHF----NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWI 344 (609)
Q Consensus 269 ~~~v~~l~wsp~----~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~s 344 (609)
.|.|-.+.|++. ..+.......-.+|++.... .+...+.-..|...|+.+-|.
T Consensus 67 pw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss-----------------------~~aIef~lhghsraitd~n~~ 123 (1081)
T KOG0309|consen 67 PWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS-----------------------SNAIEFVLHGHSRAITDINFN 123 (1081)
T ss_pred cchhcceecccCCCCceeEEecCcchhhhhhhhcCC-----------------------ccceEEEEecCccceeccccC
Confidence 455677888875 24445555677789987621 222233333489999999999
Q ss_pred cCC-CEEEEEeCCCeEEEEeCCCCe-eEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCC
Q psy4876 345 QEG-YMLGVGTSLGTVQLWDVSAKK-KCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQ 419 (609)
Q Consensus 345 pdg-~~Lasgs~dg~I~iwd~~~~~-~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~ 419 (609)
+.. ..||+++.|-.|..||+.+.. .+..+..-......+.| +++.+++ +....|.+||++.+..++..+++|..
T Consensus 124 ~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i~vwd~r~gs~pl~s~K~~vs 202 (1081)
T KOG0309|consen 124 PQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGSTPLCSLKGHVS 202 (1081)
T ss_pred CCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhh-ccCCceEEEeccCCCcceEEecccce
Confidence 976 789999999999999998753 44444444556677888 4666654 45567999999999889999999999
Q ss_pred CeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEEC
Q psy4876 420 EVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNV 498 (609)
Q Consensus 420 ~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~ 498 (609)
.|.+++|.. ....+.+++.|++|+.||...... ..-+.. ....+|..-.+-|.|...++--. -.+..+.+++.
T Consensus 203 ~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~----e~~~~v-tt~~piw~~r~~Pfg~g~~~mp~-~G~n~v~~~~c 276 (1081)
T KOG0309|consen 203 SVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT----ESKRTV-TTNFPIWRGRYLPFGEGYCIMPM-VGGNMVPQLRC 276 (1081)
T ss_pred eeehHHHhhhhhhhhcccCCCCceeeeccccccc----ccceec-cccCcceeccccccCceeEeccc-cCCeeeeeccc
Confidence 999999976 334688899999999999876532 222222 23456677777777654433211 01224444433
Q ss_pred CC----------CceeEEEcCCC-CeEEEEEcC--------CCC--eEEEEEecCCCeEEEEECC
Q psy4876 499 SS----------GACLDSIDTKS-QVCALLWNS--------DYK--ELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 499 ~t----------~~~~~~~~~~~-~v~sl~~s~--------~g~--~l~~~sG~~dg~I~Iwd~~ 542 (609)
++ .+.++.+.+|. .|....|-. +.+ .|++ -+.|..+++|-+.
T Consensus 277 ~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVT--WSkD~~lrlWpI~ 339 (1081)
T KOG0309|consen 277 ENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVT--WSKDQTLRLWPID 339 (1081)
T ss_pred cchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEE--eecCCceEeeecc
Confidence 32 34677777665 555555533 222 3444 5589999999774
No 298
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.66 E-value=1.5e-05 Score=85.29 Aligned_cols=255 Identities=16% Similarity=0.048 Sum_probs=151.6
Q ss_pred CCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEE-EEEccCCCEEEEEeCCCe
Q psy4876 280 FNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCS-VAWIQEGYMLGVGTSLGT 358 (609)
Q Consensus 280 ~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~-v~~spdg~~Lasgs~dg~ 358 (609)
+.+++++.++.++.+|.++ ++..-...+ .+.+.+ ... .+..+++++.+|.
T Consensus 121 ~~v~v~~~~g~l~ald~~t-------------------------G~~~W~~~~--~~~~~ssP~v--~~~~v~v~~~~g~ 171 (394)
T PRK11138 121 GKVYIGSEKGQVYALNAED-------------------------GEVAWQTKV--AGEALSRPVV--SDGLVLVHTSNGM 171 (394)
T ss_pred CEEEEEcCCCEEEEEECCC-------------------------CCCcccccC--CCceecCCEE--ECCEEEEECCCCE
Confidence 3467777889999999988 443222222 122221 111 2456777888999
Q ss_pred EEEEeCCCCeeEEEecCCCCce-----EEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCC----C---CeEEEEE
Q psy4876 359 VQLWDVSAKKKCRTMDGHDVRV-----GALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHT----Q---EVCGLKW 426 (609)
Q Consensus 359 I~iwd~~~~~~~~~l~~h~~~V-----~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~----~---~V~~l~~ 426 (609)
|..+|..+|+.+-.+......+ ..-...+..++.++.+|.+..+|..++. .+....... . ....+.-
T Consensus 172 l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~-~~W~~~~~~~~~~~~~~~~~~~~~ 250 (394)
T PRK11138 172 LQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQ-LIWQQRISQPTGATEIDRLVDVDT 250 (394)
T ss_pred EEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCCh-hhheeccccCCCccchhcccccCC
Confidence 9999999999887765431111 1111223456777888999999988774 333221100 0 0111112
Q ss_pred cc--CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCcee
Q psy4876 427 SP--DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 427 sp--dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~ 504 (609)
+| .+..++.++.+|.+..+|..+++ .+..... .....+.. .+..+++.. .++.+..+|..+|+.+
T Consensus 251 sP~v~~~~vy~~~~~g~l~ald~~tG~------~~W~~~~--~~~~~~~~--~~~~vy~~~---~~g~l~ald~~tG~~~ 317 (394)
T PRK11138 251 TPVVVGGVVYALAYNGNLVALDLRSGQ------IVWKREY--GSVNDFAV--DGGRIYLVD---QNDRVYALDTRGGVEL 317 (394)
T ss_pred CcEEECCEEEEEEcCCeEEEEECCCCC------EEEeecC--CCccCcEE--ECCEEEEEc---CCCeEEEEECCCCcEE
Confidence 22 34567777889999999999884 3322211 11112222 234555543 7999999999999876
Q ss_pred EEEcC--CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEE-EEEeCCCCEEEEEECCCCEEEE
Q psy4876 505 DSIDT--KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLN-LAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 505 ~~~~~--~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~-l~~spdg~~L~s~s~Dg~I~iW 581 (609)
-.... .....+... .+..+++ +..+|.|+++|..+++.+....-....+.. ..+ .+..|+.++.||.|..+
T Consensus 318 W~~~~~~~~~~~sp~v--~~g~l~v--~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~ 391 (394)
T PRK11138 318 WSQSDLLHRLLTAPVL--YNGYLVV--GDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAI 391 (394)
T ss_pred EcccccCCCcccCCEE--ECCEEEE--EeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEE
Confidence 54432 112222222 2455666 447999999999999988877544333322 222 34578889999999887
Q ss_pred Ec
Q psy4876 582 KI 583 (609)
Q Consensus 582 dl 583 (609)
+.
T Consensus 392 ~~ 393 (394)
T PRK11138 392 TR 393 (394)
T ss_pred eC
Confidence 64
No 299
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.66 E-value=3.1e-05 Score=75.60 Aligned_cols=234 Identities=15% Similarity=0.185 Sum_probs=133.0
Q ss_pred EEEccCCCEEEEEeCCCeEEEEeCCCC--eeEEEec---CCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEE
Q psy4876 341 VAWIQEGYMLGVGTSLGTVQLWDVSAK--KKCRTMD---GHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVAL 413 (609)
Q Consensus 341 v~~spdg~~Lasgs~dg~I~iwd~~~~--~~~~~l~---~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~ 413 (609)
++.+.+|+.||+- .|..|.|=...+. ..+...+ .....-..++| ++.+|+.+...|+|.++|+... .+..
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~--~lf~ 79 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGS--ELFV 79 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccc--eeEE
Confidence 5677899988865 4567777665542 2222222 22334567888 6789999999999999999864 2223
Q ss_pred Ecc-------CCCCeEEEEEccCC------CEEEEEeCCCcEEEEeCCCCCCCCCccceEee--cC-CcccEEEEEEcCC
Q psy4876 414 LQN-------HTQEVCGLKWSPDG------RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL--SR-HQAAVKAIAWCPW 477 (609)
Q Consensus 414 ~~~-------h~~~V~~l~~spdg------~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~--~~-h~~~V~~l~~sp~ 477 (609)
+.. -...|.++.|.+-. ..|++-..+|.++-|-+..+.. ...+..+.+ .. +...|.++.++|.
T Consensus 80 I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~-q~y~e~hsfsf~~~yp~Gi~~~vy~p~ 158 (282)
T PF15492_consen 80 IPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTN-QGYQENHSFSFSSHYPHGINSAVYHPK 158 (282)
T ss_pred cCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccC-CcceeeEEEEecccCCCceeEEEEcCC
Confidence 221 23567778776521 2466667788887777543211 111233333 22 4678999999997
Q ss_pred CCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCC------eEEEEECCCCceEEEEe
Q psy4876 478 SPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQN------QLIIWKYPSLVKVAELH 551 (609)
Q Consensus 478 ~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg------~I~Iwd~~~~~~~~~l~ 551 (609)
. +||++|| .....-..+. .....+++-..-.+..+...+..++++ +..+|.+.+........
T Consensus 159 h-~LLlVgG-~~~~~~~~s~----------a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~ 226 (282)
T PF15492_consen 159 H-RLLLVGG-CEQNQDGMSK----------ASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQG 226 (282)
T ss_pred C-CEEEEec-cCCCCCcccc----------ccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccc
Confidence 6 4665664 2322100000 001122222222222221111111121 12344444332222222
Q ss_pred CCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccch
Q psy4876 552 GHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSK 590 (609)
Q Consensus 552 ~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~ 590 (609)
.....|..|..||||..||+...+|.|.+|++-.-...+
T Consensus 227 ~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~ 265 (282)
T PF15492_consen 227 QEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQR 265 (282)
T ss_pred cCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhc
Confidence 356789999999999999999999999999997655433
No 300
>KOG4714|consensus
Probab=98.66 E-value=9.3e-07 Score=84.47 Aligned_cols=150 Identities=15% Similarity=0.292 Sum_probs=96.9
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCee-EEEecC-CCCce-EEEEecCCEEEEEec-----CCeEEEEEcCCCCeeEEEE
Q psy4876 343 WIQEGYMLGVGTSLGTVQLWDVSAKKK-CRTMDG-HDVRV-GALAWNTYILSSGSR-----CGNIVHHDVRSRDHKVALL 414 (609)
Q Consensus 343 ~spdg~~Lasgs~dg~I~iwd~~~~~~-~~~l~~-h~~~V-~~l~~~~~~L~sgs~-----dg~I~iwd~~~~~~~~~~~ 414 (609)
.+--++.++++..||.+.+++.+.... .+.+.. |.+.. .++.-.++.+.++.. -+..+.|+++.....+...
T Consensus 97 ~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~ 176 (319)
T KOG4714|consen 97 CTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSK 176 (319)
T ss_pred ccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccc
Confidence 334467899999999999999765111 111111 11111 111113444443321 2345677776543222222
Q ss_pred ccCCCCeEEEEEccC-CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeE
Q psy4876 415 QNHTQEVCGLKWSPD-GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHI 493 (609)
Q Consensus 415 ~~h~~~V~~l~~spd-g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I 493 (609)
.. ...|.+++-+|. ..++++|+.||.|-+||.+... .+...+..|..++..+-|+|..+.-|.++ +.||.+
T Consensus 177 ~~-~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~-----~p~S~l~ahk~~i~eV~FHpk~p~~Lft~--sedGsl 248 (319)
T KOG4714|consen 177 KA-LDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVA-----MPVSLLKAHKAEIWEVHFHPKNPEHLFTC--SEDGSL 248 (319)
T ss_pred cc-cccchhhhCCcccccEEEEecCCCeEEEEEccccc-----chHHHHHHhhhhhhheeccCCCchheeEe--cCCCcE
Confidence 22 234999999994 5567888899999999999873 56777889999999999999776655555 489999
Q ss_pred EEEECCC
Q psy4876 494 YFWNVSS 500 (609)
Q Consensus 494 ~iwd~~t 500 (609)
.-||..+
T Consensus 249 w~wdas~ 255 (319)
T KOG4714|consen 249 WHWDAST 255 (319)
T ss_pred EEEcCCC
Confidence 9999764
No 301
>KOG4190|consensus
Probab=98.65 E-value=2.3e-07 Score=96.29 Aligned_cols=264 Identities=15% Similarity=0.216 Sum_probs=164.4
Q ss_pred CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeE
Q psy4876 281 NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTV 359 (609)
Q Consensus 281 ~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I 359 (609)
.+++++.|++|++|.+....... +.-.+.+++. |..+|.++-|-.+-++++++ ||-|
T Consensus 749 SFiSASkDKTVKLWSik~EgD~~--------------------~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~gi 806 (1034)
T KOG4190|consen 749 SFISASKDKTVKLWSIKPEGDEI--------------------GTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGI 806 (1034)
T ss_pred ceeeccCCceEEEEEeccccCcc--------------------ccceeeeEhhhccCcccceeeeeccceeeec--cCcc
Confidence 38889999999999997621110 2333455566 99999999999988888654 6789
Q ss_pred EEEeCCCCeeEEEecC-----CCCceEEEEe-cCCEEEEE-ecCCeEEEEEcCCCCeeEEEE-----ccCCCCeEEEEEc
Q psy4876 360 QLWDVSAKKKCRTMDG-----HDVRVGALAW-NTYILSSG-SRCGNIVHHDVRSRDHKVALL-----QNHTQEVCGLKWS 427 (609)
Q Consensus 360 ~iwd~~~~~~~~~l~~-----h~~~V~~l~~-~~~~L~sg-s~dg~I~iwd~~~~~~~~~~~-----~~h~~~V~~l~~s 427 (609)
.+||.--+..+..+.. ..+.|.|+.- +..++++| +...+|+++|.+..+. ...+ .+....+.+++.-
T Consensus 807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~-~~E~kVcna~~Pna~~R~iaVa 885 (1034)
T KOG4190|consen 807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEW-TCELKVCNAPGPNALTRAIAVA 885 (1034)
T ss_pred eeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccc-eeeEEeccCCCCchheeEEEec
Confidence 9999988777664432 2234445443 56666666 6788999999997652 2222 3455778999999
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEE-EECCCCceeEE
Q psy4876 428 PDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYF-WNVSSGACLDS 506 (609)
Q Consensus 428 pdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~i-wd~~t~~~~~~ 506 (609)
+.|+++|.+-..|+|.+.|.++|. .+..+....-....++ .|....+.-+. .|..+.+ |....|.....
T Consensus 886 ~~GN~lAa~LSnGci~~LDaR~G~------vINswrpmecdllqla-apsdq~L~~sa---ldHslaVnWhaldgimh~q 955 (1034)
T KOG4190|consen 886 DKGNKLAAALSNGCIAILDARNGK------VINSWRPMECDLLQLA-APSDQALAQSA---LDHSLAVNWHALDGIMHLQ 955 (1034)
T ss_pred cCcchhhHHhcCCcEEEEecCCCc------eeccCCcccchhhhhc-CchhHHHHhhc---ccceeEeeehhcCCeeeec
Confidence 999999999999999999999994 3443333333333333 23232333332 5778877 87666654433
Q ss_pred EcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC----CceEEEEe--CCCCCEEEEEEeCCCCEEEEEECCCCEEE
Q psy4876 507 IDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS----LVKVAELH--GHSARVLNLAMSPDETTVLSAGADETLRL 580 (609)
Q Consensus 507 ~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~----~~~~~~l~--~h~~~V~~l~~spdg~~L~s~s~Dg~I~i 580 (609)
.+...... --...-|..++++. ..+.+.||--.. ...+..++ ...+..+.++.-|-..-+..|...|.|++
T Consensus 956 ~kpppepa-hflqsvgpSLV~a~--~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 956 DKPPPEPA-HFLQSVGPSLVTAQ--NGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred cCCCCcch-hhhhccCceeEEec--cCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence 33221110 01112244455533 345556663210 11111222 23456788888887777777888888875
No 302
>KOG2314|consensus
Probab=98.63 E-value=5.1e-06 Score=86.94 Aligned_cols=225 Identities=18% Similarity=0.297 Sum_probs=155.7
Q ss_pred EEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEE
Q psy4876 274 LIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGV 352 (609)
Q Consensus 274 ~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Las 352 (609)
.+.||.|+ .+|.-...+|.|++... -.+.....+ .-..|....|+|.++.||.
T Consensus 310 ~frWS~DdKy~Arm~~~sisIyEtps-------------------------f~lld~Ksl-ki~gIr~FswsP~~~llAY 363 (698)
T KOG2314|consen 310 IFRWSHDDKYFARMTGNSISIYETPS-------------------------FMLLDKKSL-KISGIRDFSWSPTSNLLAY 363 (698)
T ss_pred eEEeccCCceeEEeccceEEEEecCc-------------------------eeeeccccc-CCccccCcccCCCcceEEE
Confidence 47899885 77766668999998755 111111122 4577899999999999886
Q ss_pred EeCC-----CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEe----------cCCeEEEEEcCCCCeeEEEEc
Q psy4876 353 GTSL-----GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGS----------RCGNIVHHDVRSRDHKVALLQ 415 (609)
Q Consensus 353 gs~d-----g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs----------~dg~I~iwd~~~~~~~~~~~~ 415 (609)
-+.. ..+.|..+.+++.+++-.-|.-.-..+.| +|.+|+.-- .-..+-|+.++..+.++..+.
T Consensus 364 wtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ve 443 (698)
T KOG2314|consen 364 WTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVE 443 (698)
T ss_pred EcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeee
Confidence 4432 35788888888888887766666666777 677776532 222456677776654444443
Q ss_pred cCCCCeEEEEEccCCCEEEEEeC---CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCe
Q psy4876 416 NHTQEVCGLKWSPDGRYLASGGN---DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRH 492 (609)
Q Consensus 416 ~h~~~V~~l~~spdg~~lasgs~---Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~ 492 (609)
-...|...+|-|.|..+++-+. ..++.+|-+++.. .....+..+.. ...+.+.|+|.|..+++.+-++..|.
T Consensus 444 -lke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~--~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~ 518 (698)
T KOG2314|consen 444 -LKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNI--KKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGD 518 (698)
T ss_pred -cchheeeeeeccCCCeEEEEEccccccceeEEEeecCC--Cchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccc
Confidence 4577889999999998877553 3578888887421 12244444433 45678999999988887776678999
Q ss_pred EEEEECCCCceeEE-EcCCCCeEEEEEcCCCCeEEEEE
Q psy4876 493 IYFWNVSSGACLDS-IDTKSQVCALLWNSDYKELVSAH 529 (609)
Q Consensus 493 I~iwd~~t~~~~~~-~~~~~~v~sl~~s~~g~~l~~~s 529 (609)
+.++|+....+... ...|...+.+.|.|.|+|+++++
T Consensus 519 l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~s 556 (698)
T KOG2314|consen 519 LEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSS 556 (698)
T ss_pred eEEEecchhhhhhccCccccccccceECCCCCEEEEee
Confidence 99999985333222 23456788999999999999865
No 303
>KOG1645|consensus
Probab=98.63 E-value=1.1e-06 Score=88.71 Aligned_cols=242 Identities=14% Similarity=0.140 Sum_probs=155.5
Q ss_pred CCCCeEEEEEccCCC-EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCe
Q psy4876 334 GNENVCSVAWIQEGY-MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 334 h~~~V~~v~~spdg~-~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
+...|.+++|+|..+ ++..++.+..|.|.|+++...+..+..+ ..+++++|+ .+++++|..+|.|.|||++..+.
T Consensus 192 ~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~ 270 (463)
T KOG1645|consen 192 EGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEG 270 (463)
T ss_pred cchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCCc
Confidence 678899999999876 7788999999999999999888888877 889999994 68999999999999999998764
Q ss_pred eEEEEcc--CCCCeEEEEE------ccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcE
Q psy4876 410 KVALLQN--HTQEVCGLKW------SPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 410 ~~~~~~~--h~~~V~~l~~------spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 481 (609)
.+..+.+ ...+|..++. .+.|.+|+....+ +..|++...... ..++..+ +..+...+++.++-.+++
T Consensus 271 ~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~--~p~vlel-e~pG~cismqy~~~snh~ 345 (463)
T KOG1645|consen 271 PLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAEC--LPCVLEL-EPPGICISMQYHGVSNHL 345 (463)
T ss_pred hHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccC--CCccccc-CCCcceeeeeecCccceE
Confidence 4443332 2234444433 3345555555443 566766543211 1222222 345677788888887888
Q ss_pred EEEEeccCC-----CeEEE-EECCCCceeEEEc-C--CCC-----eEEEEE-cCCCCeEEEEEecCCCeEEEEECCCCce
Q psy4876 482 LASGGGTAD-----RHIYF-WNVSSGACLDSID-T--KSQ-----VCALLW-NSDYKELVSAHGFAQNQLIIWKYPSLVK 546 (609)
Q Consensus 482 lasggGs~D-----g~I~i-wd~~t~~~~~~~~-~--~~~-----v~sl~~-s~~g~~l~~~sG~~dg~I~Iwd~~~~~~ 546 (609)
+++.- +.- ..|-. -|-.+|..+.... + ++. -....+ .++.+++ ++.|.+.+.+.+||..+++.
T Consensus 346 l~tyR-s~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~i-v~~gd~tn~lil~D~~s~ev 423 (463)
T KOG1645|consen 346 LLTYR-SNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYI-VVVGDSTNELILQDPHSFEV 423 (463)
T ss_pred EEEec-CCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEE-EEecCCcceeEEeccchhhe
Confidence 88763 110 11111 1222343332221 0 110 111222 3444444 44466889999999999999
Q ss_pred EEEEeCCCCCEEEEEEeC-CCC-EEEEEECCCCEEEEEcCC
Q psy4876 547 VAELHGHSARVLNLAMSP-DET-TVLSAGADETLRLWKIFE 585 (609)
Q Consensus 547 ~~~l~~h~~~V~~l~~sp-dg~-~L~s~s~Dg~I~iWdl~~ 585 (609)
+..+.-. .+|.+++... +|. +|++- .|..++||+.+.
T Consensus 424 vQ~l~~~-epv~Dicp~~~n~~syLa~L-Td~~v~Iyk~es 462 (463)
T KOG1645|consen 424 VQTLALS-EPVLDICPNDTNGSSYLALL-TDDRVHIYKNES 462 (463)
T ss_pred eeecccC-cceeecceeecCCcchhhhe-ecceEEEEecCC
Confidence 9988644 7898888654 444 55544 566888887653
No 304
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.59 E-value=2.6e-05 Score=83.59 Aligned_cols=236 Identities=8% Similarity=-0.004 Sum_probs=139.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeE-EE
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVC-GL 424 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~-~l 424 (609)
++..+++++.+|.+..+|.++|+.+-...............+..++.+..+|.|..+|..+++ .+.........+. ..
T Consensus 119 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~-~~W~~~~~~~~~~~~~ 197 (394)
T PRK11138 119 AGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGA-VKWTVNLDVPSLTLRG 197 (394)
T ss_pred ECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEECCEEEEECCCCEEEEEEccCCC-EeeeecCCCCcccccC
Confidence 356777888999999999999998877664432222223345667778889999999999885 4544432211000 00
Q ss_pred EEcc--CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCc-ccEEEEEEcC--CCCcEEEEEeccCCCeEEEEECC
Q psy4876 425 KWSP--DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ-AAVKAIAWCP--WSPNVLASGGGTADRHIYFWNVS 499 (609)
Q Consensus 425 ~~sp--dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~-~~V~~l~~sp--~~~~llasggGs~Dg~I~iwd~~ 499 (609)
.-+| .+..++.++.+|.+..+|..+++..+..........+. .....+.-+| .+..+++.+ .++.+..+|..
T Consensus 198 ~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~---~~g~l~ald~~ 274 (394)
T PRK11138 198 ESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALA---YNGNLVALDLR 274 (394)
T ss_pred CCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEE---cCCeEEEEECC
Confidence 0112 23356777888999999999884332211000000000 0000111111 133455543 68999999999
Q ss_pred CCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCC-EEEEEEeCCCCEEEEEECCCCE
Q psy4876 500 SGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSAR-VLNLAMSPDETTVLSAGADETL 578 (609)
Q Consensus 500 t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~-V~~l~~spdg~~L~s~s~Dg~I 578 (609)
+|+.+-....... ..+. ..+..+++. ..++.|..+|..+++.+.....-... ...... .+..|+.++.||.|
T Consensus 275 tG~~~W~~~~~~~-~~~~--~~~~~vy~~--~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l 347 (394)
T PRK11138 275 SGQIVWKREYGSV-NDFA--VDGGRIYLV--DQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYL 347 (394)
T ss_pred CCCEEEeecCCCc-cCcE--EECCEEEEE--cCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEE
Confidence 9988766543321 1122 235566663 37899999999999876543221111 122222 25578889999999
Q ss_pred EEEEcCCCccchhh
Q psy4876 579 RLWKIFEKVKSKKK 592 (609)
Q Consensus 579 ~iWdl~~~~~~~k~ 592 (609)
.+.|..+++..-+.
T Consensus 348 ~~ld~~tG~~~~~~ 361 (394)
T PRK11138 348 HWINREDGRFVAQQ 361 (394)
T ss_pred EEEECCCCCEEEEE
Confidence 99999888765443
No 305
>KOG1275|consensus
Probab=98.58 E-value=3.2e-06 Score=93.07 Aligned_cols=184 Identities=13% Similarity=0.190 Sum_probs=134.6
Q ss_pred cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCC
Q psy4876 386 NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRH 465 (609)
Q Consensus 386 ~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h 465 (609)
++..++.|+-...+..+|+++.. ..+...-....|.-+. .+++++.+|...|+|.+-|.++. +.++++..|
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~-e~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~------~~iht~~aH 216 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEK-ETRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSF------ETIHTFDAH 216 (1118)
T ss_pred CCcceeecchhhheeeeecccce-eeeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcC------ceeeeeecc
Confidence 35677788877888899998763 3444333333454444 46789999999999999999988 899999999
Q ss_pred cccEEEEEEcCCCCcEEEEEec-------cCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEE
Q psy4876 466 QAAVKAIAWCPWSPNVLASGGG-------TADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLII 538 (609)
Q Consensus 466 ~~~V~~l~~sp~~~~llasggG-------s~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~I 538 (609)
.+.|.++... | ++|+++|- ..|..|+|||++..+.+.-+..+....-+.|+|.....++++ +..|+..+
T Consensus 217 s~siSDfDv~--G-NlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~-S~sGq~q~ 292 (1118)
T KOG1275|consen 217 SGSISDFDVQ--G-NLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVT-SQSGQFQF 292 (1118)
T ss_pred ccceeeeecc--C-CeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEE-ecccceee
Confidence 9999887764 4 56666652 236779999999888777666665556677888765544432 26888888
Q ss_pred EECCCC----ceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEE
Q psy4876 539 WKYPSL----VKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWK 582 (609)
Q Consensus 539 wd~~~~----~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWd 582 (609)
.|..+. ..+..+......+..++++++|+.++.|..+|.|.+|.
T Consensus 293 vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 293 VDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred ccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 884321 12222333445699999999999999999999999998
No 306
>KOG2695|consensus
Probab=98.56 E-value=2.3e-07 Score=91.72 Aligned_cols=160 Identities=19% Similarity=0.227 Sum_probs=116.1
Q ss_pred EEEccC--CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCC----CeeEE
Q psy4876 341 VAWIQE--GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSR----DHKVA 412 (609)
Q Consensus 341 v~~spd--g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~----~~~~~ 412 (609)
++|+-+ |-.++ .+.+..|-+-|+++|- .+.+. ..+.|.++.| .+.+++.|+++|.|..+|++.+ ....+
T Consensus 217 CawSlni~gyhfs-~G~sqqv~L~nvetg~-~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~ 293 (425)
T KOG2695|consen 217 CAWSLNIMGYHFS-VGLSQQVLLTNVETGH-QQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQ 293 (425)
T ss_pred hhhhhccceeeec-ccccceeEEEEeeccc-ccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceE
Confidence 367643 33433 4445668888888753 23333 6678888888 4789999999999999999976 23444
Q ss_pred EEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEE--EEcCCCCcEEEEEeccC
Q psy4876 413 LLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI--AWCPWSPNVLASGGGTA 489 (609)
Q Consensus 413 ~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l--~~sp~~~~llasggGs~ 489 (609)
.+. |.+.|+++.... ++++|++.+.+|.|.+||++..+.. .-+.++.+|...-.-+ ..++... +++++| .
T Consensus 294 rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~---~~V~qYeGHvN~~a~l~~~v~~eeg-~I~s~G--d 366 (425)
T KOG2695|consen 294 RLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCK---KSVMQYEGHVNLSAYLPAHVKEEEG-SIFSVG--D 366 (425)
T ss_pred EEE-cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcc---cceeeeecccccccccccccccccc-eEEEcc--C
Confidence 443 899999998887 8889999999999999999976221 2378888886543333 3344443 444443 8
Q ss_pred CCeEEEEECCCCceeEEEcCC
Q psy4876 490 DRHIYFWNVSSGACLDSIDTK 510 (609)
Q Consensus 490 Dg~I~iwd~~t~~~~~~~~~~ 510 (609)
|...+||.++.|..+.++...
T Consensus 367 DcytRiWsl~~ghLl~tipf~ 387 (425)
T KOG2695|consen 367 DCYTRIWSLDSGHLLCTIPFP 387 (425)
T ss_pred eeEEEEEecccCceeeccCCC
Confidence 999999999999999888754
No 307
>KOG4714|consensus
Probab=98.51 E-value=4.4e-07 Score=86.63 Aligned_cols=199 Identities=17% Similarity=0.250 Sum_probs=121.8
Q ss_pred eEEEEe-cCCEEEEEecCCeEEEEEcCC-----------CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeC
Q psy4876 380 VGALAW-NTYILSSGSRCGNIVHHDVRS-----------RDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSG 447 (609)
Q Consensus 380 V~~l~~-~~~~L~sgs~dg~I~iwd~~~-----------~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~ 447 (609)
+..+.+ ....|+++..++.+.....-. +-.....+..|.+.-.+-+.+--++-++++..||.+.+++.
T Consensus 39 ~~~~~~v~~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~ 118 (319)
T KOG4714|consen 39 LSKVSLSAEYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFST 118 (319)
T ss_pred EEEeechhhheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceEEEEec
Confidence 555555 356677777666655443321 11223334444443333333444667999999999999998
Q ss_pred CCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEe-c--cCCCeEEEEECCCCc-eeEEEcCCCCeEEEEEcCCCC
Q psy4876 448 VPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG-G--TADRHIYFWNVSSGA-CLDSIDTKSQVCALLWNSDYK 523 (609)
Q Consensus 448 ~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg-G--s~Dg~I~iwd~~t~~-~~~~~~~~~~v~sl~~s~~g~ 523 (609)
+..- +..+++..-...-.+.+.+..+ .++.+++ | ..-+..+.|+++-.+ .+........|.+++-+|..+
T Consensus 119 ~~~~-----~~~~~i~~~~~~~as~~~~~~~-~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq 192 (319)
T KOG4714|consen 119 DKDL-----ALMSRIPSIHSGSASRKICRHG-NSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQ 192 (319)
T ss_pred hHHH-----hhhhhcccccccccccceeecc-cEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcccc
Confidence 7521 1111221111112233333334 3444332 1 123455667665322 222222334599999999888
Q ss_pred eEEEEEecCCCeEEEEECCCCceEE-EEeCCCCCEEEEEEeC-CCCEEEEEECCCCEEEEEcCC
Q psy4876 524 ELVSAHGFAQNQLIIWKYPSLVKVA-ELHGHSARVLNLAMSP-DETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 524 ~l~~~sG~~dg~I~Iwd~~~~~~~~-~l~~h~~~V~~l~~sp-dg~~L~s~s~Dg~I~iWdl~~ 585 (609)
.++++ |..||.+-+||.+...... .+..|...|+.+.|+| ++..|++++.||.+..||-.+
T Consensus 193 ~~v~c-gt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 193 HLVCC-GTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred cEEEE-ecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 87766 6799999999998875433 4578999999999999 677999999999999999875
No 308
>KOG1275|consensus
Probab=98.51 E-value=2.7e-06 Score=93.65 Aligned_cols=181 Identities=15% Similarity=0.222 Sum_probs=139.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
++..++.|+-...+..+|+.+.+..+........|.-+..+++++++|...|+|.+-|.++. +.++++..|++.|..+.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~-~~iht~~aHs~siSDfD 224 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSF-ETIHTFDAHSGSISDFD 224 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcC-ceeeeeeccccceeeee
Confidence 34566677777789999999988888887777779999999999999999999999999987 58999999999998655
Q ss_pred EccCCCEEEEEeC---------CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEE
Q psy4876 426 WSPDGRYLASGGN---------DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFW 496 (609)
Q Consensus 426 ~spdg~~lasgs~---------Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iw 496 (609)
. .|+.|+++|. |..|+|||+++. +.+.-+.-+.++ .-+.|+|.-...+++. +..|...+-
T Consensus 225 v--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmm------ral~PI~~~~~P-~flrf~Psl~t~~~V~--S~sGq~q~v 293 (1118)
T KOG1275|consen 225 V--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMM------RALSPIQFPYGP-QFLRFHPSLTTRLAVT--SQSGQFQFV 293 (1118)
T ss_pred c--cCCeEEEeecccccccccccchhhhhhhhhh------hccCCcccccCc-hhhhhcccccceEEEE--ecccceeec
Confidence 5 5889999875 556899999987 333333333333 5567888666666665 378999999
Q ss_pred ECCC-Cc---eeEEEc-CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEE
Q psy4876 497 NVSS-GA---CLDSID-TKSQVCALLWNSDYKELVSAHGFAQNQLIIWK 540 (609)
Q Consensus 497 d~~t-~~---~~~~~~-~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd 540 (609)
|..+ +. -+..+. ..+.+..+.+++++..++. |..+|.|.+|.
T Consensus 294 d~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alaf--gd~~g~v~~wa 340 (1118)
T KOG1275|consen 294 DTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAF--GDHEGHVNLWA 340 (1118)
T ss_pred cccccCCCccceeEEccCCCcceeEEecCCCceEEE--ecccCcEeeec
Confidence 8432 11 122333 3456999999999999999 77999999997
No 309
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.50 E-value=0.00017 Score=72.59 Aligned_cols=222 Identities=14% Similarity=0.129 Sum_probs=151.0
Q ss_pred eEEEEEcc-CCCEEEEEeCCCe-EEEEeCCCCeeEEEecCCCCce--EEEEe--cCCEEEEEec-----CCeEEEEEcCC
Q psy4876 338 VCSVAWIQ-EGYMLGVGTSLGT-VQLWDVSAKKKCRTMDGHDVRV--GALAW--NTYILSSGSR-----CGNIVHHDVRS 406 (609)
Q Consensus 338 V~~v~~sp-dg~~Lasgs~dg~-I~iwd~~~~~~~~~l~~h~~~V--~~l~~--~~~~L~sgs~-----dg~I~iwd~~~ 406 (609)
...++.+| .+..++++-.-|. ..+||..+++....+....++- ..-.| +|.+|++.-. .|.|-|||...
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 44678888 4577777777664 7889999999888776544432 12344 6888888654 47899999996
Q ss_pred CCeeEEEEccCCCCeEEEEEccCCCEEEEEeC------------------CCcEEEEeCCCCCCCCCccceEe--e--cC
Q psy4876 407 RDHKVALLQNHTQEVCGLKWSPDGRYLASGGN------------------DNLLNIWSGVPGQHTFSTQPIHS--L--SR 464 (609)
Q Consensus 407 ~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~------------------Dg~I~iwd~~~~~~~~~~~~~~~--~--~~ 464 (609)
.-..+..+..|.-.-..+.+.|||+.|+++.. +-.+.+.|..++ +.+.+ + ..
T Consensus 87 ~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG------~ll~q~~Lp~~~ 160 (305)
T PF07433_consen 87 GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSG------ALLEQVELPPDL 160 (305)
T ss_pred CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCC------ceeeeeecCccc
Confidence 55678888888877888999999988887631 223555566666 44443 4 34
Q ss_pred CcccEEEEEEcCCCCcEEEEEeccCCC-------eEEEEECCCCceeEEEc--------CCCCeEEEEEcCCCCeEEEEE
Q psy4876 465 HQAAVKAIAWCPWSPNVLASGGGTADR-------HIYFWNVSSGACLDSID--------TKSQVCALLWNSDYKELVSAH 529 (609)
Q Consensus 465 h~~~V~~l~~sp~~~~llasggGs~Dg-------~I~iwd~~t~~~~~~~~--------~~~~v~sl~~s~~g~~l~~~s 529 (609)
|...|..|++.++|. +++... ..+ -|.+++. ++.+..+. ....+-+|+++.++.++++++
T Consensus 161 ~~lSiRHLa~~~~G~-V~~a~Q--~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~ts 235 (305)
T PF07433_consen 161 HQLSIRHLAVDGDGT-VAFAMQ--YQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTS 235 (305)
T ss_pred cccceeeEEecCCCc-EEEEEe--cCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEEC
Confidence 777899999999873 333221 111 1333332 33333332 235789999999999998765
Q ss_pred ecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEEC
Q psy4876 530 GFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGA 574 (609)
Q Consensus 530 G~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~ 574 (609)
- ..|.+.+||..++..+....- ..+..++-.+++ +++|.+.
T Consensus 236 P-rGg~~~~~d~~tg~~~~~~~l--~D~cGva~~~~~-f~~ssG~ 276 (305)
T PF07433_consen 236 P-RGGRVAVWDAATGRLLGSVPL--PDACGVAPTDDG-FLVSSGQ 276 (305)
T ss_pred C-CCCEEEEEECCCCCEeecccc--CceeeeeecCCc-eEEeCCC
Confidence 3 788999999999998876543 345677776666 5665554
No 310
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.48 E-value=4.5e-07 Score=62.39 Aligned_cols=39 Identities=33% Similarity=0.552 Sum_probs=36.6
Q ss_pred CceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEE
Q psy4876 544 LVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWK 582 (609)
Q Consensus 544 ~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWd 582 (609)
++++..+.+|.+.|.+|+|+|++.+|++++.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 357788999999999999999999999999999999997
No 311
>KOG0882|consensus
Probab=98.47 E-value=3.8e-06 Score=85.92 Aligned_cols=277 Identities=13% Similarity=0.175 Sum_probs=182.8
Q ss_pred EEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCE
Q psy4876 272 LNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYM 349 (609)
Q Consensus 272 v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~ 349 (609)
|..+...... ++.++.||.++.|.-... .-.+-+..+. |.+.|.+++.+-+|..
T Consensus 12 i~hv~~tka~fiiqASlDGh~KFWkKs~i------------------------sGvEfVKhFraHL~~I~sl~~S~dg~L 67 (558)
T KOG0882|consen 12 ITHVFPTKAKFIIQASLDGHKKFWKKSRI------------------------SGVEFVKHFRAHLGVILSLAVSYDGWL 67 (558)
T ss_pred eeeEeeehhheEEeeecchhhhhcCCCCc------------------------cceeehhhhHHHHHHHHhhhcccccee
Confidence 3334444433 778999999999976430 1123333344 8889999999999999
Q ss_pred EEEEeC-CCeEEEEeCCCCeeEEEecCCCCceEEEEe---cC---CEEE-EEecCCeEEEEEcCCCC-eeEEEEccCCCC
Q psy4876 350 LGVGTS-LGTVQLWDVSAKKKCRTMDGHDVRVGALAW---NT---YILS-SGSRCGNIVHHDVRSRD-HKVALLQNHTQE 420 (609)
Q Consensus 350 Lasgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~---~~---~~L~-sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~ 420 (609)
+++++. |..++++|+++-..+..++-. ..-..+.| .| ..++ +.-.+|.|.++|-.... +....-.-|..+
T Consensus 68 ~~Sv~d~Dhs~KvfDvEn~DminmiKL~-~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sP 146 (558)
T KOG0882|consen 68 FRSVEDPDHSVKVFDVENFDMINMIKLV-DLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSP 146 (558)
T ss_pred EeeccCcccceeEEEeeccchhhhcccc-cCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCc
Confidence 999777 999999999876554333311 11123334 23 1333 34467899999987654 334445579999
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCC------CCCCCC---ccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVP------GQHTFS---TQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~------~~~~~~---~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
|.++.+++-+..+++....|.|..|.... ....+. ..-+..+........++.|+|++..+-..+ .|.
T Consensus 147 V~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~---~Dr 223 (558)
T KOG0882|consen 147 VKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLN---PDR 223 (558)
T ss_pred eEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccC---ccc
Confidence 99999999999999999999999999873 100000 011222333455678999999997665553 799
Q ss_pred eEEEEECCCCceeEEEcC---------------------------------C-CCeEEEEEcCCCCeEEEEEecCCCeEE
Q psy4876 492 HIYFWNVSSGACLDSIDT---------------------------------K-SQVCALLWNSDYKELVSAHGFAQNQLI 537 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~---------------------------------~-~~v~sl~~s~~g~~l~~~sG~~dg~I~ 537 (609)
.|++++..+|+.++.++. . ..-+.++|...+++|+.++ ---|+
T Consensus 224 kVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t---~~gik 300 (558)
T KOG0882|consen 224 KVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGT---ILGIK 300 (558)
T ss_pred EEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeec---ceeEE
Confidence 999999999987655431 0 1235678888899988743 34588
Q ss_pred EEECCCCceEEEEeCC---------------------------CCCEEEEEEeCCCCEEEEEECCCCEEEE
Q psy4876 538 IWKYPSLVKVAELHGH---------------------------SARVLNLAMSPDETTVLSAGADETLRLW 581 (609)
Q Consensus 538 Iwd~~~~~~~~~l~~h---------------------------~~~V~~l~~spdg~~L~s~s~Dg~I~iW 581 (609)
|.++.+.+.+..+-.. ..++ +.+.+|-..++++-....+++|
T Consensus 301 vin~~tn~v~ri~gk~e~ir~~~~sl~q~~~k~~~~~~~~~a~~np~--~~~~~dpt~~c~a~kk~rfylf 369 (558)
T KOG0882|consen 301 VINLDTNTVVRILGKDEAIRFTRLSLYQGAQKSNLAALEVAASNNPL--LEFQKDPTIVCTAFKKNRFYLF 369 (558)
T ss_pred EEEeecCeEEEEeccchhhhhhhHHHHhhhhhccchhhhhhhccCcc--cccCCCCeEEEeeeecceEEEE
Confidence 8888877766554210 1111 2255566677777777777777
No 312
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.47 E-value=0.0002 Score=72.00 Aligned_cols=219 Identities=14% Similarity=0.147 Sum_probs=138.3
Q ss_pred EEEecCCC--eEEEEc--CCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCC
Q psy4876 274 LIDWSHFN--VLAVAL--GGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGY 348 (609)
Q Consensus 274 ~l~wsp~~--lla~s~--dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~ 348 (609)
.++.+|.. .++.+. +....+||..+ +.......-. ...---.-.|++||+
T Consensus 9 ~~a~~p~~~~avafaRRPG~~~~v~D~~~-------------------------g~~~~~~~a~~gRHFyGHg~fs~dG~ 63 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARRPGTFALVFDCRT-------------------------GQLLQRLWAPPGRHFYGHGVFSPDGR 63 (305)
T ss_pred ceeeCCCCCeEEEEEeCCCcEEEEEEcCC-------------------------CceeeEEcCCCCCEEecCEEEcCCCC
Confidence 46667743 444444 45678899988 5544333322 111222578999999
Q ss_pred EEEEEeC-----CCeEEEEeCC-CCeeEEEecCCCCceEEEEe--cCCEEEEEe------------------cCCeEEEE
Q psy4876 349 MLGVGTS-----LGTVQLWDVS-AKKKCRTMDGHDVRVGALAW--NTYILSSGS------------------RCGNIVHH 402 (609)
Q Consensus 349 ~Lasgs~-----dg~I~iwd~~-~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs------------------~dg~I~iw 402 (609)
+|++.-. .|.|-|||.. +-+.+.++..|.-.-..+.+ ++..|+++- .+..+...
T Consensus 64 ~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~l 143 (305)
T PF07433_consen 64 LLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYL 143 (305)
T ss_pred EEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEE
Confidence 9998543 4889999998 56778888877666566666 555555542 23345556
Q ss_pred EcCCCCeeEEE--E--ccCCCCeEEEEEccCCCEEEEEeCCC-------cEEEEeCCCCCCCCCccceEeecCCcccEEE
Q psy4876 403 DVRSRDHKVAL--L--QNHTQEVCGLKWSPDGRYLASGGNDN-------LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKA 471 (609)
Q Consensus 403 d~~~~~~~~~~--~--~~h~~~V~~l~~spdg~~lasgs~Dg-------~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~ 471 (609)
|..++. .+.. + ..|.-.|..|++.++|..++..-..| .|.+++....- .....+......-.+.+-+
T Consensus 144 d~~sG~-ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~-~~~~~p~~~~~~l~~Y~gS 221 (305)
T PF07433_consen 144 DARSGA-LLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGAL-RLLPAPEEQWRRLNGYIGS 221 (305)
T ss_pred ecCCCc-eeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcc-eeccCChHHHHhhCCceEE
Confidence 666654 3333 3 34777899999999987665544333 24444433210 0000011112234567899
Q ss_pred EEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCC
Q psy4876 472 IAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDY 522 (609)
Q Consensus 472 l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g 522 (609)
|+++.++..+++++- ..+.+.+||..++..+..... ..++.++-..++
T Consensus 222 Ia~~~~g~~ia~tsP--rGg~~~~~d~~tg~~~~~~~l-~D~cGva~~~~~ 269 (305)
T PF07433_consen 222 IAADRDGRLIAVTSP--RGGRVAVWDAATGRLLGSVPL-PDACGVAPTDDG 269 (305)
T ss_pred EEEeCCCCEEEEECC--CCCEEEEEECCCCCEeecccc-CceeeeeecCCc
Confidence 999999977777764 789999999999998766543 357777777777
No 313
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.45 E-value=6.8e-05 Score=81.90 Aligned_cols=297 Identities=11% Similarity=-0.001 Sum_probs=179.8
Q ss_pred cccccCCccCCceeEEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeee------ee
Q psy4876 258 DRILDAPEIQNDYYLNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHL------MD 331 (609)
Q Consensus 258 ~~il~ap~~~~~~~v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~ 331 (609)
.+...+|+-.|+|| ++.++|..|.|+|+-+-+....+++-.|+++.-.-+..... ....+ ..
T Consensus 54 ~~~~v~pg~~deyy---------~f~SgG~sG~~~v~G~PSmr~l~~ipvf~~~~~~G~G~~~e---sk~~l~~~~~~~~ 121 (635)
T PRK02888 54 GKYEVAPGELDEYY---------GFWSGGHSGEVRILGLPSMRELMRIPVFNRDSATGWGITNE---SKKVLGEGARGGK 121 (635)
T ss_pred CcccCCCCCcccEE---------EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCCchh---HHHHhhccccCCc
Confidence 45667788888888 34668889999999999988888888888876655543210 00000 00
Q ss_pred ec-CCCCeEEEEEc---cCCCEEEEEeC-CCeEEEEeCCCCeeEEEecC-CCCceEEEEe----cCCEEEEEe-------
Q psy4876 332 LE-GNENVCSVAWI---QEGYMLGVGTS-LGTVQLWDVSAKKKCRTMDG-HDVRVGALAW----NTYILSSGS------- 394 (609)
Q Consensus 332 ~~-h~~~V~~v~~s---pdg~~Lasgs~-dg~I~iwd~~~~~~~~~l~~-h~~~V~~l~~----~~~~L~sgs------- 394 (609)
+. .+..-..+++. -||++|++-.. +..|-..++...++-+.+.- ....+..+.| +..++++++
T Consensus 122 ~~~gD~HHp~~s~t~g~ydGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~Plp 201 (635)
T PRK02888 122 YLNGDTHHPHMSFTDGTYDGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLP 201 (635)
T ss_pred ccCCCcCCCcccccCCccceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccC
Confidence 11 01111122222 36788888764 56677777766554443321 1111112222 112222222
Q ss_pred -----------cCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC----CcEEEEeCCCCCCCCCccce
Q psy4876 395 -----------RCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND----NLLNIWSGVPGQHTFSTQPI 459 (609)
Q Consensus 395 -----------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~D----g~I~iwd~~~~~~~~~~~~~ 459 (609)
..+.+.+.|..+.+ ....+.- ......++++++|+++++.+.+ +++...+.... ..+
T Consensus 202 nDGk~l~~~~ey~~~vSvID~etme-V~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~------d~~ 273 (635)
T PRK02888 202 NDGKDLDDPKKYRSLFTAVDAETME-VAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAER------DWV 273 (635)
T ss_pred CCCCEeecccceeEEEEEEECccce-EEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccC------ceE
Confidence 23456666766643 3333321 2244667899999998887632 23333332211 111
Q ss_pred EeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC-----CceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCC
Q psy4876 460 HSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS-----GACLDSIDTKSQVCALLWNSDYKELVSAHGFAQN 534 (609)
Q Consensus 460 ~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t-----~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg 534 (609)
..+... . ..++.++|+..++ .++.|.+.|..+ .+.+..+........+.++|||++++++ |..++
T Consensus 274 vvfni~--~--iea~vkdGK~~~V-----~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVa-nklS~ 343 (635)
T PRK02888 274 VVFNIA--R--IEEAVKAGKFKTI-----GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIAN-GKLSP 343 (635)
T ss_pred EEEchH--H--HHHhhhCCCEEEE-----CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEe-CCCCC
Confidence 111100 0 0133456765554 267899999998 4677888888899999999999999987 45799
Q ss_pred eEEEEECCCCce------------EEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 535 QLIIWKYPSLVK------------VAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 535 ~I~Iwd~~~~~~------------~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
+|.|+|+.+.+. +.+..- ...-...+|.++|....|.-.|..|..|++..
T Consensus 344 tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 344 TVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred cEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 999999987653 333332 23456789999999888899999999999986
No 314
>KOG2114|consensus
Probab=98.44 E-value=5.6e-05 Score=83.31 Aligned_cols=210 Identities=14% Similarity=0.132 Sum_probs=142.4
Q ss_pred EEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCc-eEEEEe-cC-CEEEEEecCCe-----EEEEEcCCCC-----
Q psy4876 342 AWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVR-VGALAW-NT-YILSSGSRCGN-----IVHHDVRSRD----- 408 (609)
Q Consensus 342 ~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~-V~~l~~-~~-~~L~sgs~dg~-----I~iwd~~~~~----- 408 (609)
+|++.+..+|.|+.+|.|.+++- ..+.++.++.+... |..+.. ++ .+|++.+.|+. |+||++...+
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred EEcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 46788899999999999988873 33555778877777 444433 33 57888777654 8999997542
Q ss_pred eeE--EEEcc-----CCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcE
Q psy4876 409 HKV--ALLQN-----HTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 409 ~~~--~~~~~-----h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 481 (609)
+.+ ..+.. ...++++++++.+-+.+|+|-.+|.|..+.-+-..... ....-......+|+.+++..++..+
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrg--sr~~~~~~~~~pITgL~~~~d~~s~ 186 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRG--SRQDYSHRGKEPITGLALRSDGKSV 186 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccc--cceeeeccCCCCceeeEEecCCcee
Confidence 222 11222 35678999999999999999999999988643221110 1122222346789999999998874
Q ss_pred EEEEeccCCCeEEEEECCCCce-eEEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe-CCCCCEE
Q psy4876 482 LASGGGTADRHIYFWNVSSGAC-LDSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH-GHSARVL 558 (609)
Q Consensus 482 lasggGs~Dg~I~iwd~~t~~~-~~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~-~h~~~V~ 558 (609)
+.+. .-..|.+|.+....+ ...++.++ .+.+..+++....++++ ....|.+|+.+....-..+. ||...+.
T Consensus 187 lFv~---Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca---~~e~l~fY~sd~~~~cfaf~~g~kk~~~ 260 (933)
T KOG2114|consen 187 LFVA---TTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICA---GSEFLYFYDSDGRGPCFAFEVGEKKEML 260 (933)
T ss_pred EEEE---ecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEe---cCceEEEEcCCCcceeeeecCCCeEEEE
Confidence 3333 368899999984442 34455554 78888888777756664 36889999988766666665 6665444
Q ss_pred EE
Q psy4876 559 NL 560 (609)
Q Consensus 559 ~l 560 (609)
.+
T Consensus 261 ~~ 262 (933)
T KOG2114|consen 261 VF 262 (933)
T ss_pred EE
Confidence 33
No 315
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.41 E-value=0.0002 Score=75.48 Aligned_cols=254 Identities=16% Similarity=0.214 Sum_probs=140.9
Q ss_pred cCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC
Q psy4876 287 LGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSA 366 (609)
Q Consensus 287 ~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~ 366 (609)
..+.++|||+++ +....+... ...+....|+|+|+.||.... +.|.+++..+
T Consensus 21 ~~~~y~i~d~~~-------------------------~~~~~l~~~--~~~~~~~~~sP~g~~~~~v~~-~nly~~~~~~ 72 (353)
T PF00930_consen 21 FKGDYYIYDIET-------------------------GEITPLTPP--PPKLQDAKWSPDGKYIAFVRD-NNLYLRDLAT 72 (353)
T ss_dssp EEEEEEEEETTT-------------------------TEEEESS-E--ETTBSEEEE-SSSTEEEEEET-TEEEEESSTT
T ss_pred cceeEEEEecCC-------------------------CceEECcCC--ccccccceeecCCCeeEEEec-CceEEEECCC
Confidence 346889999998 665555443 467889999999999998765 7899999887
Q ss_pred CeeEEEecCCC-----------------CceEEEEe--cCCEEEEEecC-C-----------------------------
Q psy4876 367 KKKCRTMDGHD-----------------VRVGALAW--NTYILSSGSRC-G----------------------------- 397 (609)
Q Consensus 367 ~~~~~~l~~h~-----------------~~V~~l~~--~~~~L~sgs~d-g----------------------------- 397 (609)
+...+...... ..-..+.| +++.|+....| .
T Consensus 73 ~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G 152 (353)
T PF00930_consen 73 GQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAG 152 (353)
T ss_dssp SEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTT
T ss_pred CCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCC
Confidence 75443222110 11233445 34554443221 1
Q ss_pred ------eEEEEEcCCCCee-EEEE---ccCCCCeEEEEEccCCCEEEEE--eCC---CcEEEEeCCCCCCCCCccceEee
Q psy4876 398 ------NIVHHDVRSRDHK-VALL---QNHTQEVCGLKWSPDGRYLASG--GND---NLLNIWSGVPGQHTFSTQPIHSL 462 (609)
Q Consensus 398 ------~I~iwd~~~~~~~-~~~~---~~h~~~V~~l~~spdg~~lasg--s~D---g~I~iwd~~~~~~~~~~~~~~~~ 462 (609)
.+.|+|+.++... +... ..-...+..+.|.+++..|+.. ..+ ..+.++|..++.. +.+..-
T Consensus 153 ~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~----~~~~~e 228 (353)
T PF00930_consen 153 DPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGET----RVVLEE 228 (353)
T ss_dssp S---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTC----EEEEEE
T ss_pred CcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCce----eEEEEe
Confidence 1344555554321 1111 1234568889999998844433 222 2467778876632 222211
Q ss_pred cCCcccE---EEEEEc-CCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEE-EEEcCCCCeEEEEEec---CCC
Q psy4876 463 SRHQAAV---KAIAWC-PWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCA-LLWNSDYKELVSAHGF---AQN 534 (609)
Q Consensus 463 ~~h~~~V---~~l~~s-p~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~s-l~~s~~g~~l~~~sG~---~dg 534 (609)
...+.| ..+.|. +++..++.....+.-.+|.+++...+.......+...|.. +.|+++++.++..+.. ...
T Consensus 229 -~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r 307 (353)
T PF00930_consen 229 -TSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGER 307 (353)
T ss_dssp -ESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSB
T ss_pred -cCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCCce
Confidence 122222 345554 7776666655322234566667766654422234446744 7788998888765432 133
Q ss_pred eEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEE
Q psy4876 535 QLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAG 573 (609)
Q Consensus 535 ~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s 573 (609)
.|+..++..+..+..|......-..+.|||+|++++-..
T Consensus 308 ~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 308 HLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp EEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEE
T ss_pred EEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEE
Confidence 566666663445555554333336899999999887543
No 316
>KOG2695|consensus
Probab=98.39 E-value=6.9e-07 Score=88.43 Aligned_cols=147 Identities=20% Similarity=0.265 Sum_probs=111.9
Q ss_pred EEecCC--C-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEE
Q psy4876 275 IDWSHF--N-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLG 351 (609)
Q Consensus 275 l~wsp~--~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~La 351 (609)
++|+-+ + -+++|.+..|-|-|+++ +-.+. +.....|.++.|...++++.
T Consensus 217 CawSlni~gyhfs~G~sqqv~L~nvet-------------------------g~~qs---f~sksDVfAlQf~~s~nLv~ 268 (425)
T KOG2695|consen 217 CAWSLNIMGYHFSVGLSQQVLLTNVET-------------------------GHQQS---FQSKSDVFALQFAGSDNLVF 268 (425)
T ss_pred hhhhhccceeeecccccceeEEEEeec-------------------------ccccc---cccchhHHHHHhcccCCeeE
Confidence 467654 2 35688888999999988 43332 22457899999999899999
Q ss_pred EEeCCCeEEEEeCCCC-----eeEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCC--eeEEEEccCCCCe
Q psy4876 352 VGTSLGTVQLWDVSAK-----KKCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRD--HKVALLQNHTQEV 421 (609)
Q Consensus 352 sgs~dg~I~iwd~~~~-----~~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~--~~~~~~~~h~~~V 421 (609)
.|+.+|.|.++|+..+ .+...+ -|...|+++.. ++.+|++.+.+|.|.+||++... ..+..+.+|-..-
T Consensus 269 ~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~ 347 (425)
T KOG2695|consen 269 NGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLS 347 (425)
T ss_pred ecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccc
Confidence 9999999999999764 233334 38888888764 78999999999999999998653 2377788885433
Q ss_pred EEE--EEccCCCEEEEEeCCCcEEEEeCCCC
Q psy4876 422 CGL--KWSPDGRYLASGGNDNLLNIWSGVPG 450 (609)
Q Consensus 422 ~~l--~~spdg~~lasgs~Dg~I~iwd~~~~ 450 (609)
.-+ -..+....++++++|...+||.++.+
T Consensus 348 a~l~~~v~~eeg~I~s~GdDcytRiWsl~~g 378 (425)
T KOG2695|consen 348 AYLPAHVKEEEGSIFSVGDDCYTRIWSLDSG 378 (425)
T ss_pred cccccccccccceEEEccCeeEEEEEecccC
Confidence 333 34556678888999999999999988
No 317
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.31 E-value=0.0015 Score=67.70 Aligned_cols=283 Identities=16% Similarity=0.150 Sum_probs=140.9
Q ss_pred ceeEEEEEecCCC--eEE-EEcC--CeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEE
Q psy4876 269 DYYLNLIDWSHFN--VLA-VALG--GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAW 343 (609)
Q Consensus 269 ~~~v~~l~wsp~~--lla-~s~d--g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~ 343 (609)
..|.+-=+|.++| +|- +..| ..+++.|+++ +++.+|....+ .......+
T Consensus 35 ~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t-------------------------~~i~QLTdg~g-~~~~g~~~ 88 (386)
T PF14583_consen 35 RLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLAT-------------------------GEITQLTDGPG-DNTFGGFL 88 (386)
T ss_dssp ---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT--------------------------EEEE---SS--B-TTT-EE
T ss_pred ceeecCCCcCCCCCEEEEEeccCCCcceEEEEccc-------------------------CEEEECccCCC-CCccceEE
Confidence 3555556778886 443 4444 4788889988 77777776542 22225667
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe----cCCEEEEEec----------------------CC
Q psy4876 344 IQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW----NTYILSSGSR----------------------CG 397 (609)
Q Consensus 344 spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~----~~~~L~sgs~----------------------dg 397 (609)
+++++.|+-...+..|+-.|+++.+....+......+....| ++..++-.-. .+
T Consensus 89 s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~ 168 (386)
T PF14583_consen 89 SPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHC 168 (386)
T ss_dssp -TTSSEEEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---E
T ss_pred ecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCc
Confidence 788888776656678999999998876666666666665666 2444332211 13
Q ss_pred eEEEEEcCCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeC---CC-cEEEEeCCCCCCCCCccceEeecCCcccEEEE
Q psy4876 398 NIVHHDVRSRDHKVALLQNHTQEVCGLKWSP-DGRYLASGGN---DN-LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI 472 (609)
Q Consensus 398 ~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasgs~---Dg-~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l 472 (609)
.|...|+.+++ ...+..-...+..+.|+| |..+|+.|-+ |. .-+||-+++.... ..+++.-. ....+..=
T Consensus 169 ~i~~idl~tG~--~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~--~~~v~~~~-~~e~~gHE 243 (386)
T PF14583_consen 169 RIFTIDLKTGE--RKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN--VKKVHRRM-EGESVGHE 243 (386)
T ss_dssp EEEEEETTT----EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS-----EESS----TTEEEEEE
T ss_pred eEEEEECCCCc--eeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc--ceeeecCC-CCcccccc
Confidence 45666777753 334433556778899999 5556666554 22 1255554432110 12222211 12345556
Q ss_pred EEcCCCCcEEEEEe--ccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecC--------------CCeE
Q psy4876 473 AWCPWSPNVLASGG--GTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFA--------------QNQL 536 (609)
Q Consensus 473 ~~sp~~~~llasgg--Gs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~--------------dg~I 536 (609)
-|.|+|..+...+. |..+..|.-+|..+++....... .....+.-+++|++++-=.+.. +--|
T Consensus 244 fw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~-p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i 322 (386)
T PF14583_consen 244 FWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEM-PWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWI 322 (386)
T ss_dssp EE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE--SEEEEEE-TTSSEEEEEE-------------------EE
T ss_pred cccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeC-CceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEE
Confidence 79999988877543 23566788899998875433222 2455666678888876432211 1246
Q ss_pred EEEECCCCceEEEEeCCC---------C--CEEEEEEeCCCCEEE-EEECCCCEEEEEcC
Q psy4876 537 IIWKYPSLVKVAELHGHS---------A--RVLNLAMSPDETTVL-SAGADETLRLWKIF 584 (609)
Q Consensus 537 ~Iwd~~~~~~~~~l~~h~---------~--~V~~l~~spdg~~L~-s~s~Dg~I~iWdl~ 584 (609)
++++...+.... +..|. . .=....|+|||++|+ ++...|...||-+.
T Consensus 323 ~~~~~~~~~~~~-l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~ 381 (386)
T PF14583_consen 323 YLFDVEAGRFRK-LARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVE 381 (386)
T ss_dssp EEEETTTTEEEE-EEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred EEeccccCceee-eeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEEe
Confidence 678887665432 22221 1 125689999999665 56668888877654
No 318
>KOG1008|consensus
Probab=98.30 E-value=2.2e-07 Score=98.57 Aligned_cols=200 Identities=19% Similarity=0.322 Sum_probs=135.7
Q ss_pred CCceeEEEEEecCCC---eEE-EEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEE
Q psy4876 267 QNDYYLNLIDWSHFN---VLA-VALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVA 342 (609)
Q Consensus 267 ~~~~~v~~l~wsp~~---lla-~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~ 342 (609)
.+.-|+.|++|.-+. +++ |..+|.|.+-....... . ....+-.+..++++++
T Consensus 54 sdtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hd----------------------S--s~E~tp~~ar~Ct~lA 109 (783)
T KOG1008|consen 54 SDTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHD----------------------S--SAEVTPGYARPCTSLA 109 (783)
T ss_pred ccCCCceeehhhcCCchhhhhhccccCceEEeecCCccc----------------------c--cceecccccccccccc
Confidence 345678999998763 555 56689999988765110 0 0111222778999999
Q ss_pred Ecc-CCCEEEEEeC----CCeEEEEeCCCC----eeEEEecC-CCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCee
Q psy4876 343 WIQ-EGYMLGVGTS----LGTVQLWDVSAK----KKCRTMDG-HDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHK 410 (609)
Q Consensus 343 ~sp-dg~~Lasgs~----dg~I~iwd~~~~----~~~~~l~~-h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~ 410 (609)
|++ |.+.||+|-. |..+.|||+.++ +.-..+.+ ......+++| +..++.+|.....+.++|++..-
T Consensus 110 wneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~-- 187 (783)
T KOG1008|consen 110 WNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSL-- 187 (783)
T ss_pred cccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhh--
Confidence 998 4578887743 467999999876 11122222 3445568888 56788899888899999998532
Q ss_pred EEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEe-CCCCCCCCCccceEeecCCc----ccEEEEEEcCCCCcEEEE
Q psy4876 411 VALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWS-GVPGQHTFSTQPIHSLSRHQ----AAVKAIAWCPWSPNVLAS 484 (609)
Q Consensus 411 ~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd-~~~~~~~~~~~~~~~~~~h~----~~V~~l~~sp~~~~llas 484 (609)
.....-.+..|.++.+.| .+.++++-. ||.|.+|| .+.-+ .++..+.... ..+..++|+|....++++
T Consensus 188 ~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnie-----npl~~i~~~~N~~~~~l~~~aycPtrtglla~ 261 (783)
T KOG1008|consen 188 DSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIE-----NPLQIILRNENKKPKQLFALAYCPTRTGLLAV 261 (783)
T ss_pred hhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchhhhc-----cHHHHHhhCCCCcccceeeEEeccCCcchhhh
Confidence 222222445678888999 888888766 89999999 33321 2333332222 348999999998878887
Q ss_pred EeccCCCeEEEEECC
Q psy4876 485 GGGTADRHIYFWNVS 499 (609)
Q Consensus 485 ggGs~Dg~I~iwd~~ 499 (609)
.. -..++|+++|+.
T Consensus 262 l~-RdS~tIrlydi~ 275 (783)
T KOG1008|consen 262 LS-RDSITIRLYDIC 275 (783)
T ss_pred hc-cCcceEEEeccc
Confidence 74 467899999986
No 319
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.30 E-value=0.00097 Score=67.92 Aligned_cols=209 Identities=13% Similarity=0.052 Sum_probs=131.2
Q ss_pred EEEEEccCCCEEEEEe--CCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEE--
Q psy4876 339 CSVAWIQEGYMLGVGT--SLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALL-- 414 (609)
Q Consensus 339 ~~v~~spdg~~Lasgs--~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~-- 414 (609)
..++++.||+++++.- -.-.|.|-|+..++.+.++.- .+...-.-+.+.-|.+-|.||.+....+....+.....
T Consensus 98 ~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~-PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~ 176 (342)
T PF06433_consen 98 NMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT-PGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTK 176 (342)
T ss_dssp GGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG-TSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEE
T ss_pred cceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC-CCEEEEEecCCCceEEEecCCceEEEEECCCCCEeEeecc
Confidence 3568889999888754 345799999999998887763 22222223345678899999999999998554333221
Q ss_pred --ccCCCCe-EEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC----------CcccEEEEEEcCCCCcE
Q psy4876 415 --QNHTQEV-CGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR----------HQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 415 --~~h~~~V-~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~----------h~~~V~~l~~sp~~~~l 481 (609)
.....++ ..-++...+..++.-+.+|.|+--|+..... .....+.. ..+.-.-+++++....|
T Consensus 177 ~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~----~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rl 252 (342)
T PF06433_consen 177 VFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSA----KFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRL 252 (342)
T ss_dssp ESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSE----EEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEE
T ss_pred ccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcc----cccCcccccCccccccCcCCcceeeeeeccccCeE
Confidence 1112222 2334555555666678889999988876532 11222211 01222346777766555
Q ss_pred EEEEeccCC-------CeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC
Q psy4876 482 LASGGGTAD-------RHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG 552 (609)
Q Consensus 482 lasggGs~D-------g~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~ 552 (609)
++.-....+ ..|.++|+.+++.+..+....++.+|..+.+.+-++.+....++.|.|||..+++.+..+..
T Consensus 253 yvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 253 YVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 543210011 35888999999999999988888899999988755543333689999999999999988764
No 320
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.30 E-value=0.00057 Score=73.17 Aligned_cols=116 Identities=15% Similarity=0.153 Sum_probs=82.5
Q ss_pred EEEEEcCCCCcEEEEEec--cCCCe----EEEEECCCCce----eEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEE
Q psy4876 470 KAIAWCPWSPNVLASGGG--TADRH----IYFWNVSSGAC----LDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIW 539 (609)
Q Consensus 470 ~~l~~sp~~~~llasggG--s~Dg~----I~iwd~~t~~~----~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iw 539 (609)
.++.|+-..++.+.+-.- +.+|. ..+|++..++. +.++...+.+.+++++|+...++. |..||.|.+|
T Consensus 209 l~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvl--GC~DgSiiLy 286 (545)
T PF11768_consen 209 LDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVL--GCEDGSIILY 286 (545)
T ss_pred EEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEE--EecCCeEEEE
Confidence 456666544444433210 12232 35667665432 344567789999999999999999 5589999999
Q ss_pred ECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccc
Q psy4876 540 KYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 540 d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
|...+... +..+.-.++.++|||+|..+++|+..|.|.+||+.-....
T Consensus 287 D~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~ 334 (545)
T PF11768_consen 287 DTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPIK 334 (545)
T ss_pred EcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCccc
Confidence 98766433 3334556789999999999999999999999998765543
No 321
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.29 E-value=2.8e-06 Score=58.32 Aligned_cols=38 Identities=34% Similarity=0.851 Sum_probs=35.9
Q ss_pred eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEe
Q psy4876 409 HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWS 446 (609)
Q Consensus 409 ~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd 446 (609)
+.+..+.+|.+.|.+|+|+|++.+|++|+.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46788999999999999999999999999999999997
No 322
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.25 E-value=0.00023 Score=75.48 Aligned_cols=244 Identities=18% Similarity=0.224 Sum_probs=139.4
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCee-------------------------------------------EEEe
Q psy4876 337 NVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKK-------------------------------------------CRTM 373 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~-------------------------------------------~~~l 373 (609)
.|+.|+|+++..-|++|...|.|.||.....+. ...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 588999999988999999999999986532211 0112
Q ss_pred cCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCeeEEEE--cc------CCCCeEEEEEcc-----CC---CEEEEE
Q psy4876 374 DGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDHKVALL--QN------HTQEVCGLKWSP-----DG---RYLASG 436 (609)
Q Consensus 374 ~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~~~~~~--~~------h~~~V~~l~~sp-----dg---~~lasg 436 (609)
....+.|++++. |=.+++.|..+|.+.|.|+|.. ..+..- .. ....|+++.|.- |+ -.+++|
T Consensus 83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGP-avI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGP-AVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTT-EEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCC-eEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 234578888888 5689999999999999999876 344331 12 234688888863 33 368999
Q ss_pred eCCCcEEEEeCCC-CCCCCCccceEeecCCcccEEEEE-EcCC-C-------------------CcEEEEEeccCCCeEE
Q psy4876 437 GNDNLLNIWSGVP-GQHTFSTQPIHSLSRHQAAVKAIA-WCPW-S-------------------PNVLASGGGTADRHIY 494 (609)
Q Consensus 437 s~Dg~I~iwd~~~-~~~~~~~~~~~~~~~h~~~V~~l~-~sp~-~-------------------~~llasggGs~Dg~I~ 494 (609)
++.|.+.+|.+.- ....+..+.......+.+.|..+. ++.+ | +.+++++ .+..++
T Consensus 162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvv---Se~~ir 238 (395)
T PF08596_consen 162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVV---SESDIR 238 (395)
T ss_dssp ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE----SSEEE
T ss_pred eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEE---cccceE
Confidence 9999999998752 222122223333334556666554 3221 0 1234443 489999
Q ss_pred EEECCCCceeEEEcCCC-CeEEEEEc-----CCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCC----CCEEEEEEeC
Q psy4876 495 FWNVSSGACLDSIDTKS-QVCALLWN-----SDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHS----ARVLNLAMSP 564 (609)
Q Consensus 495 iwd~~t~~~~~~~~~~~-~v~sl~~s-----~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~----~~V~~l~~sp 564 (609)
++...+.+..+...... ....+.+- ..+..|++.. .+|.|++|.++..+.+..+.-+. ..+...++++
T Consensus 239 v~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~--~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~ 316 (395)
T PF08596_consen 239 VFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLF--NNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISR 316 (395)
T ss_dssp EE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEE--TTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-T
T ss_pred EEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEE--CCCcEEEEECCCchHhhcccCCCccccccccccEECC
Confidence 99999888776655332 33344452 2455555544 79999999999999998876532 3455678899
Q ss_pred CCCEEEEEECCCCEEEEEcCCCc
Q psy4876 565 DETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 565 dg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
+|..++..+.. .+.++.+....
T Consensus 317 ~Gdi~~~~gps-E~~l~sv~~~~ 338 (395)
T PF08596_consen 317 NGDIFYWTGPS-EIQLFSVWGEG 338 (395)
T ss_dssp TS-EEEE-SSS-EEEEEEEES--
T ss_pred CCCEEEEeCcc-cEEEEEEEccC
Confidence 99977776544 45555554433
No 323
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.24 E-value=0.00066 Score=74.78 Aligned_cols=233 Identities=12% Similarity=0.080 Sum_probs=138.2
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCc-----e-EEEEecCCEEEEEe---------cCCeEEEEEcCCCCeeEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVR-----V-GALAWNTYILSSGS---------RCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~-----V-~~l~~~~~~L~sgs---------~dg~I~iwd~~~~~~~~~ 412 (609)
..+++++.+|.|.-+|.++|+.+-.+...... + ....+.+..++.++ .+|.|..+|..+++ .+.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~-~~W 189 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGK-LLW 189 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCc-eee
Confidence 67888899999999999999988776643321 1 12223345555554 36789999998875 444
Q ss_pred EEccCCC--------------------Ce-EEEEEccCCCEEEEEeCCC------------------cEEEEeCCCCCCC
Q psy4876 413 LLQNHTQ--------------------EV-CGLKWSPDGRYLASGGNDN------------------LLNIWSGVPGQHT 453 (609)
Q Consensus 413 ~~~~h~~--------------------~V-~~l~~spdg~~lasgs~Dg------------------~I~iwd~~~~~~~ 453 (609)
.+..... .| ...++.+.+..++.++.++ .|.-+|..+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~-- 267 (488)
T cd00216 190 RFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGK-- 267 (488)
T ss_pred EeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCC--
Confidence 4432111 01 1234445566777777655 69999999984
Q ss_pred CCccceEeec--CCc--------ccE-EEEEEcCCCC--cEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcC
Q psy4876 454 FSTQPIHSLS--RHQ--------AAV-KAIAWCPWSP--NVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNS 520 (609)
Q Consensus 454 ~~~~~~~~~~--~h~--------~~V-~~l~~sp~~~--~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~ 520 (609)
.+-.+. .|. .++ ..+. .-++. .+++.+ +.+|.+...|..+|+.+-...... ..+..++
T Consensus 268 ----~~W~~~~~~~~~~~~~~~s~p~~~~~~-~~~g~~~~~V~~g--~~~G~l~ald~~tG~~~W~~~~~~--~~~~~~~ 338 (488)
T cd00216 268 ----VKWFYQTTPHDLWDYDGPNQPSLADIK-PKDGKPVPAIVHA--PKNGFFYVLDRTTGKLISARPEVE--QPMAYDP 338 (488)
T ss_pred ----EEEEeeCCCCCCcccccCCCCeEEecc-ccCCCeeEEEEEE--CCCceEEEEECCCCcEeeEeEeec--cccccCC
Confidence 333332 111 111 1111 01221 244444 489999999999999887765321 1123333
Q ss_pred CCCeEEEEE----------------ecCCCeEEEEECCCCceEEEEeCCC--------CCEEEEEEeCCCCEEEEEECCC
Q psy4876 521 DYKELVSAH----------------GFAQNQLIIWKYPSLVKVAELHGHS--------ARVLNLAMSPDETTVLSAGADE 576 (609)
Q Consensus 521 ~g~~l~~~s----------------G~~dg~I~Iwd~~~~~~~~~l~~h~--------~~V~~l~~spdg~~L~s~s~Dg 576 (609)
..+++.. ...+|.|.-.|..+++.+-...... .....-...-.+..|+.++.||
T Consensus 339 --~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG 416 (488)
T cd00216 339 --GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADG 416 (488)
T ss_pred --ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCC
Confidence 2222211 1136788888999998877664321 1111111112567899999999
Q ss_pred CEEEEEcCCCccchhhhh
Q psy4876 577 TLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 577 ~I~iWdl~~~~~~~k~~~ 594 (609)
.|+.+|..+++..-+.+.
T Consensus 417 ~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 417 YFRAFDATTGKELWKFRT 434 (488)
T ss_pred eEEEEECCCCceeeEEEC
Confidence 999999999887655443
No 324
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.24 E-value=3.5e-05 Score=75.48 Aligned_cols=254 Identities=14% Similarity=0.235 Sum_probs=151.8
Q ss_pred eeEEEEEecCCC-eEE-EEcCCeEEEEeCCCCCCCceE--EecCCccccccccccccccceeeeeeecCCCCeEEEEEcc
Q psy4876 270 YYLNLIDWSHFN-VLA-VALGGSIYLWNGESDSNSKYI--ICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQ 345 (609)
Q Consensus 270 ~~v~~l~wsp~~-lla-~s~dg~I~iWd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~sp 345 (609)
-.|+++.|...| .++ |..+|.|.++.-+....+.|. .-|... ..+...+..++-...|..+.|..
T Consensus 27 d~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQsh-----------e~EFDYLkSleieEKin~I~w~~ 95 (460)
T COG5170 27 DKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSH-----------ELEFDYLKSLEIEEKINAIEWFD 95 (460)
T ss_pred ceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhccc-----------ccchhhhhhccHHHHhhheeeec
Confidence 357889998886 333 333589999976653222111 001110 01122222333346788999987
Q ss_pred CC--CEEEEEeCCCeEEEEeCCCCee-------------------------------------E-----EEe-cCCCCce
Q psy4876 346 EG--YMLGVGTSLGTVQLWDVSAKKK-------------------------------------C-----RTM-DGHDVRV 380 (609)
Q Consensus 346 dg--~~Lasgs~dg~I~iwd~~~~~~-------------------------------------~-----~~l-~~h~~~V 380 (609)
++ ..++..+.|.+|++|.+..... + +.+ ..|...|
T Consensus 96 ~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhi 175 (460)
T COG5170 96 DTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHI 175 (460)
T ss_pred CCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEe
Confidence 65 5666788899999998753200 0 011 2466778
Q ss_pred EEEEecC-CEEEEEecCCeEEEEEcCCCCee--EEEEccCC-----CCeEEEEEccC-CCEEEEEeCCCcEEEEeCCCCC
Q psy4876 381 GALAWNT-YILSSGSRCGNIVHHDVRSRDHK--VALLQNHT-----QEVCGLKWSPD-GRYLASGGNDNLLNIWSGVPGQ 451 (609)
Q Consensus 381 ~~l~~~~-~~L~sgs~dg~I~iwd~~~~~~~--~~~~~~h~-----~~V~~l~~spd-g~~lasgs~Dg~I~iwd~~~~~ 451 (609)
.+++|+. ...+....|=.|.+|++...+.. +..++.|. .-|++..|+|. ...|...+..|.|++-|++...
T Consensus 176 NSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~a 255 (460)
T COG5170 176 NSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSA 255 (460)
T ss_pred eeeeecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhh
Confidence 8888853 33334456778999998765433 33344453 45888999994 4567777788999999998542
Q ss_pred CCCCccc----------eEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC-CceeEEEcCCC---------
Q psy4876 452 HTFSTQP----------IHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS-GACLDSIDTKS--------- 511 (609)
Q Consensus 452 ~~~~~~~----------~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t-~~~~~~~~~~~--------- 511 (609)
....... ..-+.+-...|..+.|++.|+++++- .=-+|++||++. ..++.++..+.
T Consensus 256 lcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsR----dyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~ 331 (460)
T COG5170 256 LCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSR----DYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDV 331 (460)
T ss_pred hccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEe----ccceEEEEecccccCCceeechHHHHHHHHHhh
Confidence 1110011 11122234568889999998655542 357899999984 45677664221
Q ss_pred -------CeEEEEEcCCCCeEEEEEecCCCeEEEEE
Q psy4876 512 -------QVCALLWNSDYKELVSAHGFAQNQLIIWK 540 (609)
Q Consensus 512 -------~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd 540 (609)
.-..+.|+.+.+.+++ |+..+..-||-
T Consensus 332 YEnDaifdkFeisfSgd~~~v~s--gsy~NNfgiyp 365 (460)
T COG5170 332 YENDAIFDKFEISFSGDDKHVLS--GSYSNNFGIYP 365 (460)
T ss_pred hhccceeeeEEEEecCCcccccc--cccccceeeec
Confidence 1245778888777776 33444444443
No 325
>KOG2066|consensus
Probab=98.21 E-value=0.00011 Score=80.64 Aligned_cols=183 Identities=19% Similarity=0.254 Sum_probs=132.8
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEE
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALL 414 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~ 414 (609)
.+.++|++++ +++|+.|+.+|.|++++.+.. . .+...|... .-.|.++++|+.||.|.|-.+.+.+ ....+
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~----~~~Gey~asCS~DGkv~I~sl~~~~-~~~~~ 109 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS----ILEGEYVASCSDDGKVVIGSLFTDD-EITQY 109 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCCc-c-ccccccccc----ccCCceEEEecCCCcEEEeeccCCc-cceeE
Confidence 3566777775 579999999999999998643 3 444445544 4468999999999999999888764 33333
Q ss_pred ccCCCCeEEEEEccC-----CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 415 QNHTQEVCGLKWSPD-----GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 415 ~~h~~~V~~l~~spd-----g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
. ...++.+++++|+ .+.+++||.-| +.++.-+-... ..-..+....++|.++.|.. +++|.+ .
T Consensus 110 d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgn----k~~v~l~~~eG~I~~i~W~g---~lIAWa---n 177 (846)
T KOG2066|consen 110 D-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGN----KDSVVLSEGEGPIHSIKWRG---NLIAWA---N 177 (846)
T ss_pred e-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcC----ccceeeecCccceEEEEecC---cEEEEe---c
Confidence 3 5578999999997 56799999888 77775432211 11124556788999999964 678876 5
Q ss_pred CCeEEEEECCCCceeEEEcCCC-------CeEEEEEcCCCCeEEEEEecCCCeEEEEECC
Q psy4876 490 DRHIYFWNVSSGACLDSIDTKS-------QVCALLWNSDYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 490 Dg~I~iwd~~t~~~~~~~~~~~-------~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
|--|+|||+.+++.+..+.... -...+.|.++.+.++ | ...+|.|..++
T Consensus 178 d~Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVI---G-W~d~v~i~~I~ 233 (846)
T KOG2066|consen 178 DDGVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVI---G-WGDSVKICSIK 233 (846)
T ss_pred CCCcEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEE---e-cCCeEEEEEEe
Confidence 7789999999998887776432 346788888877665 3 45678887776
No 326
>KOG3621|consensus
Probab=98.19 E-value=0.00029 Score=76.43 Aligned_cols=278 Identities=16% Similarity=0.219 Sum_probs=159.3
Q ss_pred ceeEEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCC
Q psy4876 269 DYYLNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEG 347 (609)
Q Consensus 269 ~~~v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg 347 (609)
..+++|++-+.+-+..|+.-|.||+|+-.. +.... ...+ ..+.+..+..+++.
T Consensus 35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~-------------------------~~~~~-~~~~~~~~~~~~~~vs~~e 88 (726)
T KOG3621|consen 35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHT-------------------------GEMRK-LKNEGATGITCVRSVSSVE 88 (726)
T ss_pred eEEEEEeecCCceEEEecccceEEEEecCc-------------------------hhhhc-ccccCccceEEEEEecchh
Confidence 345666666555577788889999999876 33322 2222 45667778889999
Q ss_pred CEEEEEeCCCeEEEEeCCCCee-----EEEe-cCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCC---eeEEEEcc
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKK-----CRTM-DGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRD---HKVALLQN 416 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~-----~~~l-~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~---~~~~~~~~ 416 (609)
.++|+|+..|.|.|+-++.+.. +... ..|...|++++| |+..+++|...|.|....++... ...+.+..
T Consensus 89 ~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~ 168 (726)
T KOG3621|consen 89 YLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILS 168 (726)
T ss_pred HhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeec
Confidence 9999999999999998876421 1111 237899999999 68899999999999998887621 12233334
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCC----CCcEEEEEeccCCCe
Q psy4876 417 HTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPW----SPNVLASGGGTADRH 492 (609)
Q Consensus 417 h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~----~~~llasggGs~Dg~ 492 (609)
..++|..|.... +.+|++... . ..+++.+.+.. +.+.+-....-.-...+|-|. .+-.|+++ ---
T Consensus 169 ~ds~IVQlD~~q-~~LLVStl~-r-~~Lc~tE~eti----~QIG~k~R~~~~~~GACF~~g~~~~q~~~Iyca----RPG 237 (726)
T KOG3621|consen 169 EDSEIVQLDYLQ-SYLLVSTLT-R-CILCQTEAETI----TQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCA----RPG 237 (726)
T ss_pred cCcceEEeeccc-ceehHhhhh-h-hheeecchhHH----HHhcCCCcCCccccceEEeeccccCCCceEEEe----cCC
Confidence 556777777653 333433332 2 33455554321 111111101101123344442 23344443 344
Q ss_pred EEEEECC-CCceeEEEcCC--------------C----------------CeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 493 IYFWNVS-SGACLDSIDTK--------------S----------------QVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 493 I~iwd~~-t~~~~~~~~~~--------------~----------------~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
.|+|..+ .|+.+.+.... + ....+.+-..+..|+. .+-.|+|+|.
T Consensus 238 ~RlWead~~G~V~~Thqfk~ala~~p~p~i~~~s~esp~~~~~~~~~q~ls~~k~~~l~~~~vLa~----te~Giyv~d~ 313 (726)
T KOG3621|consen 238 LRLWEADFAGEVIKTHQFKDALARPPAPEIPIRSLESPNQRSLPSGTQHLSLSKSSTLHSDRVLAW----TEVGIYVFDS 313 (726)
T ss_pred CceEEeecceeEEEeeehhhhhccCCCCcccCCCcCCccccCCCCCccccccceeEEeecceEEEe----ecceEEEEEe
Confidence 6778765 45554443211 0 0111111112222222 2344888887
Q ss_pred CCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccch
Q psy4876 542 PSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSK 590 (609)
Q Consensus 542 ~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~ 590 (609)
.+...+.-.. -...|.+++- .|+-|+.--.|+.+++..+.......
T Consensus 314 ~~~~v~l~se-~~~DI~dVs~--~~neiFvL~~d~~l~~~sv~s~qr~l 359 (726)
T KOG3621|consen 314 NNSQVYLWSE-GGHDILDVSH--CGNEIFVLNLDRGLKVESVASRQRKL 359 (726)
T ss_pred ccceEEEeec-CCCceeEEee--cCceEEEEecCCceeEEEeehhHHHH
Confidence 7665554332 2345666654 56667777788888888888766543
No 327
>KOG0882|consensus
Probab=98.16 E-value=1.3e-05 Score=82.01 Aligned_cols=209 Identities=13% Similarity=0.057 Sum_probs=146.8
Q ss_pred CCCceEEEEe-cCCEEEEEecCCeEEEEEcCC--CCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CCcEEEEeCCCCC
Q psy4876 376 HDVRVGALAW-NTYILSSGSRCGNIVHHDVRS--RDHKVALLQNHTQEVCGLKWSPDGRYLASGGN-DNLLNIWSGVPGQ 451 (609)
Q Consensus 376 h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~--~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~-Dg~I~iwd~~~~~ 451 (609)
|...|+.+.. -.+++.+++.||.++.|--.. +-..+..+..|-..|.+++.+-+|.++.+++. |..++++|+.+-.
T Consensus 8 hrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~D 87 (558)
T KOG0882|consen 8 HRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFD 87 (558)
T ss_pred ccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccc
Confidence 6677777766 468999999999999997653 22345566788899999999999999999888 9999999998753
Q ss_pred CCCCccceEeecCCcccEEEEEEcCCC-CcEEEEEeccCCCeEEEEECCCCceeEE-E--cCCCCeEEEEEcCCCCeEEE
Q psy4876 452 HTFSTQPIHSLSRHQAAVKAIAWCPWS-PNVLASGGGTADRHIYFWNVSSGACLDS-I--DTKSQVCALLWNSDYKELVS 527 (609)
Q Consensus 452 ~~~~~~~~~~~~~h~~~V~~l~~sp~~-~~llasggGs~Dg~I~iwd~~t~~~~~~-~--~~~~~v~sl~~s~~g~~l~~ 527 (609)
-. ....+..-.+.+..+ .++.. -.+++++. ..++.+.++|-....|... + -+.++|..+.+.+.+..+++
T Consensus 88 mi----nmiKL~~lPg~a~wv-~skGd~~s~IAVs~-~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vS 161 (558)
T KOG0882|consen 88 MI----NMIKLVDLPGFAEWV-TSKGDKISLIAVSL-FKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVS 161 (558)
T ss_pred hh----hhcccccCCCceEEe-cCCCCeeeeEEeec-ccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceee
Confidence 11 111222222222221 22221 12444443 4789999999876553322 2 24469999999999999888
Q ss_pred EEecCCCeEEEEECCC------CceEEE---------EeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhh
Q psy4876 528 AHGFAQNQLIIWKYPS------LVKVAE---------LHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKK 592 (609)
Q Consensus 528 ~sG~~dg~I~Iwd~~~------~~~~~~---------l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~ 592 (609)
+...|.|.-|..+. .+.... +........++.|+|+|..+.+-+.|..|+++++.+++..+..
T Consensus 162 --iD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqei 239 (558)
T KOG0882|consen 162 --IDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEI 239 (558)
T ss_pred --ccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhh
Confidence 44679999998762 111111 1223356789999999999999999999999999998876544
No 328
>KOG3617|consensus
Probab=98.16 E-value=4e-05 Score=83.89 Aligned_cols=261 Identities=15% Similarity=0.245 Sum_probs=152.9
Q ss_pred EEecCCC-eEEEEc-----CCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCC
Q psy4876 275 IDWSHFN-VLAVAL-----GGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGY 348 (609)
Q Consensus 275 l~wsp~~-lla~s~-----dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~ 348 (609)
.+|+|.. ++|++. +|+|-||- ++ |.... .+.-.-.+++++|+|..-
T Consensus 21 ~SWHPsePlfAVA~fS~er~GSVtIfa-dt-------------------------GEPqr--~Vt~P~hatSLCWHpe~~ 72 (1416)
T KOG3617|consen 21 SSWHPSEPLFAVASFSPERGGSVTIFA-DT-------------------------GEPQR--DVTYPVHATSLCWHPEEF 72 (1416)
T ss_pred cccCCCCceeEEEEecCCCCceEEEEe-cC-------------------------CCCCc--ccccceehhhhccChHHH
Confidence 6799975 666543 68888884 33 33222 222234467899999999
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEE--EccCC--CC--
Q psy4876 349 MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVAL--LQNHT--QE-- 420 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~--~~~h~--~~-- 420 (609)
.|+.|-.-|.+.+|...+.+.......|..+|..+.| +|..|+++..-|.+.+|.....+ .++. +-.|. ..
T Consensus 73 vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g-~~q~~~~~~hel~~~lt 151 (1416)
T KOG3617|consen 73 VLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIG-EIQTSNIMQHELNDQLT 151 (1416)
T ss_pred HHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeecc-ccccchhhhhHhhceee
Confidence 9999999999999999887777777789999999999 58999999999999999887543 2222 22232 22
Q ss_pred eEEEEEccCCCE------EEEEeCCCcEE-EEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeE
Q psy4876 421 VCGLKWSPDGRY------LASGGNDNLLN-IWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHI 493 (609)
Q Consensus 421 V~~l~~spdg~~------lasgs~Dg~I~-iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I 493 (609)
.+|...++++.- .++.+.+.-+- .++.+.. ...... .|.+ .|+|-.+++++ .+|+|
T Consensus 152 l~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~------~a~rs~-~ksg-------v~~g~~F~~~~---~~GtV 214 (1416)
T KOG3617|consen 152 LWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKES------LAERSD-EKSG-------VPKGTEFLFAG---KSGTV 214 (1416)
T ss_pred EEEEecCCChHHhhhhhhhhccCchhhhcccccCccc------hhhccc-cccC-------CCCCcEEEEEc---CCceE
Confidence 344455666431 34444444332 3322211 000111 1111 34554455554 78999
Q ss_pred EEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC-CCC---------------ce---------EE
Q psy4876 494 YFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKY-PSL---------------VK---------VA 548 (609)
Q Consensus 494 ~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~-~~~---------------~~---------~~ 548 (609)
+..|- .|.+......++.| .+.|.+.-.-+++.. .+-.+.++-. .+| .. -.
T Consensus 215 yyvdq-~g~~~~V~k~dS~v-QmLf~~~~eai~~i~--e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEssG 290 (1416)
T KOG3617|consen 215 YYVDQ-NGRQRTVHKLDSEV-QMLFMGYCEAISIII--EFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESSG 290 (1416)
T ss_pred EEEcC-CCcEEEEEEccchH-HHHHhcccceEEEEe--eeceeeEEEecCCCchHHhhhhhhccccCCccCccccccccc
Confidence 88874 45555554444331 222333222222211 1222222211 000 00 00
Q ss_pred EEe-------CCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 549 ELH-------GHSARVLNLAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 549 ~l~-------~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
.+. .....++|++++..+..|..|...|.+.+|.-.+
T Consensus 291 vLr~~eKyg~e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v~ 334 (1416)
T KOG3617|consen 291 VLRKSEKYGLELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDVN 334 (1416)
T ss_pred cccCCcchhhhcCCceEEEEEeccceEEEecccCCcEEEeeecC
Confidence 010 1235799999999999999999999999996443
No 329
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.15 E-value=0.00085 Score=66.40 Aligned_cols=198 Identities=11% Similarity=0.134 Sum_probs=116.1
Q ss_pred CCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCeeEEEecCC-CCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCe-
Q psy4876 335 NENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKKCRTMDGH-DVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDH- 409 (609)
Q Consensus 335 ~~~V~~v~~spdg-~~Lasgs~dg~I~iwd~~~~~~~~~l~~h-~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~- 409 (609)
...+..++|.|+. .++++....+.|..++.+ |+.++.+.-. .+..-.|++ ++.++++.-+++.+.++++.....
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~ 99 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTS 99 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT
T ss_pred cCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccc
Confidence 4559999999985 566667777888888874 7888777543 356788888 345555555689999998843221
Q ss_pred ----eEEEEc-----cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccc-----eEeecCCcccEEEEEEc
Q psy4876 410 ----KVALLQ-----NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQP-----IHSLSRHQAAVKAIAWC 475 (609)
Q Consensus 410 ----~~~~~~-----~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~-----~~~~~~h~~~V~~l~~s 475 (609)
....+. .+...+-+|+|++.++.|+++-+..-..||.+........... ..........+.+++++
T Consensus 100 ~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~ 179 (248)
T PF06977_consen 100 LDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYD 179 (248)
T ss_dssp --EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEE
T ss_pred cchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEc
Confidence 111111 3456789999999888777777776666666653100000000 00011234457899999
Q ss_pred CCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC----------CCeEEEEEcCCCCeEEEEEecCCCeEEEE
Q psy4876 476 PWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK----------SQVCALLWNSDYKELVSAHGFAQNQLIIW 539 (609)
Q Consensus 476 p~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~----------~~v~sl~~s~~g~~l~~~sG~~dg~I~Iw 539 (609)
|...++++.. ..++.|..+| .+|+.+..+... .+.-.|+|.++|+..++ + +-+..++|
T Consensus 180 p~t~~lliLS--~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv--s-EpNlfy~f 247 (248)
T PF06977_consen 180 PRTGHLLILS--DESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV--S-EPNLFYRF 247 (248)
T ss_dssp TTTTEEEEEE--TTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE--E-TTTEEEEE
T ss_pred CCCCeEEEEE--CCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE--c-CCceEEEe
Confidence 9988888876 3889999999 678877766432 27899999999977666 2 56665554
No 330
>KOG1832|consensus
Probab=98.11 E-value=2.7e-06 Score=93.04 Aligned_cols=194 Identities=16% Similarity=0.222 Sum_probs=141.6
Q ss_pred eeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC--cEE
Q psy4876 368 KKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDN--LLN 443 (609)
Q Consensus 368 ~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg--~I~ 443 (609)
+..+++..|....+|++|. .+.|+.|+..|.|+++++.++. .......|.+.|+.+.-+.||..+++.+.-. ...
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~-~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Plsa 1170 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGS-MEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSA 1170 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcc-ccccccccccccccccccCCcceeeeeccccCchHH
Confidence 4456777888999999994 5899999999999999999984 6777889999999999999999877655432 478
Q ss_pred EEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcC-----CCCeEEEEE
Q psy4876 444 IWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT-----KSQVCALLW 518 (609)
Q Consensus 444 iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~-----~~~v~sl~~ 518 (609)
+|++... ..+.+.+.+ -.++.|+.....-+ .| +......+||+.++..+.++-. ...-....|
T Consensus 1171 LW~~~s~-----~~~~Hsf~e----d~~vkFsn~~q~r~-~g--t~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~F 1238 (1516)
T KOG1832|consen 1171 LWDASST-----GGPRHSFDE----DKAVKFSNSLQFRA-LG--TEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHF 1238 (1516)
T ss_pred Hhccccc-----cCccccccc----cceeehhhhHHHHH-hc--ccccceEEEecccCcHHHHhcCcchhhhhhcccccc
Confidence 9998753 256666654 35777876543222 22 3567889999999987766321 123467789
Q ss_pred cCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 519 NSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 519 s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
+|+..+++- || .+||++..+.+..|...+.. ..-.|||.|.-++.-+. |||+.+-.
T Consensus 1239 sP~D~LIln-----dG--vLWDvR~~~aIh~FD~ft~~-~~G~FHP~g~eVIINSE-----IwD~RTF~ 1294 (1516)
T KOG1832|consen 1239 SPCDTLILN-----DG--VLWDVRIPEAIHRFDQFTDY-GGGGFHPSGNEVIINSE-----IWDMRTFK 1294 (1516)
T ss_pred CCCcceEee-----Cc--eeeeeccHHHHhhhhhheec-ccccccCCCceEEeech-----hhhhHHHH
Confidence 999988774 44 47999888777766544322 23468999998887664 78876543
No 331
>KOG2066|consensus
Probab=98.09 E-value=7.2e-05 Score=81.95 Aligned_cols=182 Identities=14% Similarity=0.221 Sum_probs=129.0
Q ss_pred CCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCc
Q psy4876 377 DVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFST 456 (609)
Q Consensus 377 ~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~ 456 (609)
...++|++++++.|+-|+.+|.|++++.... . .....|... ..+|.++++|+.||.|.|-.+.+.
T Consensus 39 ~D~is~~av~~~~~~~GtH~g~v~~~~~~~~--~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~------ 103 (846)
T KOG2066|consen 39 NDAISCCAVHDKFFALGTHRGAVYLTTCQGN--P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTD------ 103 (846)
T ss_pred hhHHHHHHhhcceeeeccccceEEEEecCCc--c-ccccccccc------ccCCceEEEecCCCcEEEeeccCC------
Confidence 3567778888999999999999999998753 2 344445443 668999999999999999988877
Q ss_pred cceEeecCCcccEEEEEEcCC----CCcEEEEEeccCCCeEEEEECC---CCceeEEEcCCCCeEEEEEcCCCCeEEEEE
Q psy4876 457 QPIHSLSRHQAAVKAIAWCPW----SPNVLASGGGTADRHIYFWNVS---SGACLDSIDTKSQVCALLWNSDYKELVSAH 529 (609)
Q Consensus 457 ~~~~~~~~h~~~V~~l~~sp~----~~~llasggGs~Dg~I~iwd~~---t~~~~~~~~~~~~v~sl~~s~~g~~l~~~s 529 (609)
+...++. -..++.+++++|+ ....+++|| .-| +.++.-. ....+..-...+.|.++.|. |.+++.+
T Consensus 104 ~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG--~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWa- 176 (846)
T KOG2066|consen 104 DEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGG--MAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWA- 176 (846)
T ss_pred ccceeEe-cCCcceeEEeccchhhhhhhheeecC--cce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEe-
Confidence 3444443 4568999999998 334567765 455 7776543 22223233456799999995 5677775
Q ss_pred ecCCCeEEEEECCCCceEEEEeCCCCC------EEEEEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 530 GFAQNQLIIWKYPSLVKVAELHGHSAR------VLNLAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 530 G~~dg~I~Iwd~~~~~~~~~l~~h~~~------V~~l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
.|-.|+|||..+...+..+...... -..+.|.++.+++ .| ..-+|+|..+.
T Consensus 177 --nd~Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LV-IG-W~d~v~i~~I~ 233 (846)
T KOG2066|consen 177 --NDDGVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLV-IG-WGDSVKICSIK 233 (846)
T ss_pred --cCCCcEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEE-Ee-cCCeEEEEEEe
Confidence 4778999999999888877543232 3467787665544 33 33479999888
No 332
>KOG1920|consensus
Probab=98.07 E-value=0.00096 Score=76.48 Aligned_cols=209 Identities=14% Similarity=0.162 Sum_probs=133.2
Q ss_pred CCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCC----C
Q psy4876 376 HDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGV----P 449 (609)
Q Consensus 376 h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~----~ 449 (609)
.+..|.++.| ++.-++.+..+|.|.+.|..+.. ......-...|.+++|+||+++++..+.+++|.+-+-. .
T Consensus 67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~--~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~ 144 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADTNSICVITALGDIILVDPETLE--LEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIA 144 (1265)
T ss_pred CCcceEEEEEecccceEEEEecCCcEEEEcccccc--eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchh
Confidence 3468889998 67888899999999999888763 33333456789999999999999999888877665421 0
Q ss_pred CCCC-----------C--CccceEeecCC---------------------cccEEEEEEcCCCCcEEEEEe--ccCCCeE
Q psy4876 450 GQHT-----------F--STQPIHSLSRH---------------------QAAVKAIAWCPWSPNVLASGG--GTADRHI 493 (609)
Q Consensus 450 ~~~~-----------~--~~~~~~~~~~h---------------------~~~V~~l~~sp~~~~llasgg--Gs~Dg~I 493 (609)
.+.. . -.+.-..+.+. ...-..|+|--||..+.++.- .+..+.|
T Consensus 145 E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rki 224 (1265)
T KOG1920|consen 145 EKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKI 224 (1265)
T ss_pred ccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeE
Confidence 0000 0 00000011110 011235899999865554321 1223899
Q ss_pred EEEECCCCceeEEEcC-CCCeEEEEEcCCCCeEEEEEe-cCCCeEEEEECCC---CceEEEEeCCCCCEEEEEEeCCCCE
Q psy4876 494 YFWNVSSGACLDSIDT-KSQVCALLWNSDYKELVSAHG-FAQNQLIIWKYPS---LVKVAELHGHSARVLNLAMSPDETT 568 (609)
Q Consensus 494 ~iwd~~t~~~~~~~~~-~~~v~sl~~s~~g~~l~~~sG-~~dg~I~Iwd~~~---~~~~~~l~~h~~~V~~l~~spdg~~ 568 (609)
+|||-+ |..-..-.. ...-.+++|-|.|..+++.-. ..++.|.+|.-.. ++-...+......|..++|+.++..
T Consensus 225 rV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdi 303 (1265)
T KOG1920|consen 225 RVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDI 303 (1265)
T ss_pred EEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCc
Confidence 999987 443332222 235578999999999987632 3456788887432 2222222333445999999999999
Q ss_pred EEE---EECCCCEEEEEcCCCc
Q psy4876 569 VLS---AGADETLRLWKIFEKV 587 (609)
Q Consensus 569 L~s---~s~Dg~I~iWdl~~~~ 587 (609)
|++ ......|++|-+.+-.
T Consensus 304 LAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 304 LAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred eeeeecccccceEEEEEecCeE
Confidence 987 4445559999887644
No 333
>KOG2114|consensus
Probab=98.07 E-value=0.00056 Score=75.67 Aligned_cols=202 Identities=17% Similarity=0.167 Sum_probs=135.1
Q ss_pred ceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCC-eEEEEEccCCCEEEEEeCCC-----cEEEEeCCCCCC
Q psy4876 379 RVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQE-VCGLKWSPDGRYLASGGNDN-----LLNIWSGVPGQH 452 (609)
Q Consensus 379 ~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~-V~~l~~spdg~~lasgs~Dg-----~I~iwd~~~~~~ 452 (609)
.+.|+.-++..++.|+.+|.|.+.+-.- ..+..++.+... |..+....+..+|++.+.|+ .|+|||++..+.
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln~s~--~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~ 104 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILNSSF--QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDK 104 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEecccc--eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCC
Confidence 6777777789999999999998887553 345667777777 44444333446788877765 489999987643
Q ss_pred CCCccce--EeecC-----CcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC----CC-ceeEEEcCCCCeEEEEEcC
Q psy4876 453 TFSTQPI--HSLSR-----HQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS----SG-ACLDSIDTKSQVCALLWNS 520 (609)
Q Consensus 453 ~~~~~~~--~~~~~-----h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~----t~-~~~~~~~~~~~v~sl~~s~ 520 (609)
....+++ +.+.. ...++.+++.+.+- ..+|+| -.+|.|..+.-+ .| +.........+|+.+++..
T Consensus 105 n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l-~~Iv~G--f~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~ 181 (933)
T KOG2114|consen 105 NNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDL-KTIVCG--FTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRS 181 (933)
T ss_pred CCCcceeeeeeeeccCCCCCCCcceEEEEEccc-cEEEEE--ecCcEEEEEcCcchhccccceeeeccCCCCceeeEEec
Confidence 3223344 22222 34578889998874 566665 589999988532 11 2223334567999999999
Q ss_pred CCCeEEEEEecCCCeEEEEECCCCc-eEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 521 DYKELVSAHGFAQNQLIIWKYPSLV-KVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 521 ~g~~l~~~sG~~dg~I~Iwd~~~~~-~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
+++.++.+. ....|.+|.+.... ....+..|...+.|..|++....+++|+ +..|.+|+..+..+
T Consensus 182 d~~s~lFv~--Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~ 247 (933)
T KOG2114|consen 182 DGKSVLFVA--TTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGP 247 (933)
T ss_pred CCceeEEEE--ecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcce
Confidence 998843332 46889999987444 2445677888899999987655455443 45788888775443
No 334
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.07 E-value=0.0014 Score=70.54 Aligned_cols=228 Identities=14% Similarity=0.124 Sum_probs=126.0
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEE-EcCCCCeeE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHH-DVRSRDHKV 411 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iw-d~~~~~~~~ 411 (609)
.......++++|+|+++++ +.||...|+.....+.... +....+.| ..+.+++-...+.|.++ ++... ..
T Consensus 31 ~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~~-----G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~--~~ 102 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKAF-----GSGLSFVWSSRNRYAVLESSSTIKIYKNFKNE--VV 102 (443)
T ss_dssp -SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEEE-----EE-SEEEE-TSSEEEEE-TTS-EEEEETTEE---TT
T ss_pred CCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCccccc-----CceeEEEEecCccEEEEECCCeEEEEEcCccc--cc
Confidence 4566889999999999998 5568888888554443332 22345667 34667777778889996 44321 21
Q ss_pred EEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 412 ALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
..+... ..+..|-. |.+|+..+.+ .|.+||..++ +.+..+... +|..+.|++++..+.+.+ +.
T Consensus 103 k~i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~------~~i~~i~v~--~vk~V~Ws~~g~~val~t----~~ 165 (443)
T PF04053_consen 103 KSIKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETG------KLIRRIDVS--AVKYVIWSDDGELVALVT----KD 165 (443)
T ss_dssp -----S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--------EEEEESS---E-EEEEE-TTSSEEEEE-----S-
T ss_pred eEEcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHc------ceeeEEecC--CCcEEEEECCCCEEEEEe----CC
Confidence 222211 12333322 8888877754 8999999988 777777633 489999999986655553 66
Q ss_pred eEEEEECCCC-----------ceeEEEcC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEE
Q psy4876 492 HIYFWNVSSG-----------ACLDSIDT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLN 559 (609)
Q Consensus 492 ~I~iwd~~t~-----------~~~~~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~ 559 (609)
.+.|++.... .....+.. ...|.+.+|..+ .++..+ .+.|+- +..|+. ..+..-..++.=
T Consensus 166 ~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT---~~~lkY--l~~Ge~-~~i~~ld~~~yl 237 (443)
T PF04053_consen 166 SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTT---SNHLKY--LVNGET-GIIAHLDKPLYL 237 (443)
T ss_dssp SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE----TTEEEE--EETTEE-EEEEE-SS--EE
T ss_pred eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEc---CCeEEE--EEcCCc-ceEEEcCCceEE
Confidence 7888776543 02333332 678999999887 444332 336665 333332 222222456777
Q ss_pred EEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 560 LAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 560 l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
+.+.++...|+....|+.|..+.+......-+...
T Consensus 238 lgy~~~~~~ly~~Dr~~~v~~~~ld~~~~~fk~av 272 (443)
T PF04053_consen 238 LGYLPKENRLYLIDRDGNVISYELDLSELEFKTAV 272 (443)
T ss_dssp EEEETTTTEEEEE-TT--EEEEE--HHHHHHHHHH
T ss_pred EEEEccCCEEEEEECCCCEEEEEECHHHHHHHHHH
Confidence 78888888999999999999998877665555444
No 335
>KOG1008|consensus
Probab=98.06 E-value=2.5e-06 Score=90.80 Aligned_cols=242 Identities=17% Similarity=0.213 Sum_probs=158.6
Q ss_pred CCCCeEEEEEccCC--CEEEEEeCCCeEEEEeCCCCe--eEEEecCCCCceEEEEec---CCEEEEEe----cCCeEEEE
Q psy4876 334 GNENVCSVAWIQEG--YMLGVGTSLGTVQLWDVSAKK--KCRTMDGHDVRVGALAWN---TYILSSGS----RCGNIVHH 402 (609)
Q Consensus 334 h~~~V~~v~~spdg--~~Lasgs~dg~I~iwd~~~~~--~~~~l~~h~~~V~~l~~~---~~~L~sgs----~dg~I~iw 402 (609)
....+.|+++.-+. ..+++|..+|.|.+-.+.... ......+|...+++++|+ .+.|++|- .|..+.||
T Consensus 55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 44678888887654 578899999999998876432 234556788999999995 46777774 35679999
Q ss_pred EcCCCCe---eEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCC
Q psy4876 403 DVRSRDH---KVALLQ-NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWS 478 (609)
Q Consensus 403 d~~~~~~---~~~~~~-~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~ 478 (609)
|+.+.-. .-..+. +......+++|..+.+++.+|.....|.++|++.. ........+..+..+...|..
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs-------~~~~~svnTk~vqG~tVdp~~ 207 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQS-------LDSVSSVNTKYVQGITVDPFS 207 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhh-------hhhhhhhhhhhcccceecCCC
Confidence 9987511 111121 23345668899999999999999999999999853 122222234467788889977
Q ss_pred CcEEEEEeccCCCeEEEEEC-CCC-ceeEEEcC-----CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCC-------
Q psy4876 479 PNVLASGGGTADRHIYFWNV-SSG-ACLDSIDT-----KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSL------- 544 (609)
Q Consensus 479 ~~llasggGs~Dg~I~iwd~-~t~-~~~~~~~~-----~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~------- 544 (609)
...+++. .|+.|.+||. .+- .++..+.. ..++..++|+|...-+++....+.++|+++|+..-
T Consensus 208 ~nY~cs~---~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v~t~~s~n 284 (783)
T KOG1008|consen 208 PNYFCSN---SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVVGTEGSAN 284 (783)
T ss_pred CCceecc---ccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccccCCccccc
Confidence 7788774 6999999994 322 22222222 23699999999876655554557888999987421
Q ss_pred -ceEEEEe-----CCC---CCEEEEEEeCCC--CEEEEEECCCCEEEEEcCC
Q psy4876 545 -VKVAELH-----GHS---ARVLNLAMSPDE--TTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 545 -~~~~~l~-----~h~---~~V~~l~~spdg--~~L~s~s~Dg~I~iWdl~~ 585 (609)
....... .|. ..|.+..||+.. ...+++...-++.-+++..
T Consensus 285 n~~~~~~~s~~~~q~~~~~s~I~~f~wH~~s~~er~il~~~nl~~~Df~V~e 336 (783)
T KOG1008|consen 285 NSVFVNYESKYPVQPNSQCSGIDFFTWHTASPTERQILGVINLQPKDFSVHE 336 (783)
T ss_pred ccceeeecccccccccccccceeecCcCcCCccceeEEeeccCChhhccchh
Confidence 1111111 122 467778888754 3444555555555555544
No 336
>KOG1645|consensus
Probab=98.05 E-value=0.00031 Score=71.42 Aligned_cols=232 Identities=13% Similarity=0.105 Sum_probs=129.7
Q ss_pred eeEEEEEecCC--Ce-EEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccC
Q psy4876 270 YYLNLIDWSHF--NV-LAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQE 346 (609)
Q Consensus 270 ~~v~~l~wsp~--~l-la~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spd 346 (609)
..|..|++||. |+ ..++.+..|.|.|+++ ........ ....+++++|.-|
T Consensus 194 ~~IrdlafSp~~~GLl~~asl~nkiki~dlet-------------------------~~~vssy~--a~~~~wSC~wDld 246 (463)
T KOG1645|consen 194 SFIRDLAFSPFNEGLLGLASLGNKIKIMDLET-------------------------SCVVSSYI--AYNQIWSCCWDLD 246 (463)
T ss_pred hhhhhhccCccccceeeeeccCceEEEEeccc-------------------------ceeeehee--ccCCceeeeeccC
Confidence 34778999996 44 4588899999999998 33333222 2388999999987
Q ss_pred C-CEEEEEeCCCeEEEEeCCCCe-eEEEecC--CCCceEEEEe--------cCCEEEEEecCCeEEEEEcCCCCe-eEEE
Q psy4876 347 G-YMLGVGTSLGTVQLWDVSAKK-KCRTMDG--HDVRVGALAW--------NTYILSSGSRCGNIVHHDVRSRDH-KVAL 413 (609)
Q Consensus 347 g-~~Lasgs~dg~I~iwd~~~~~-~~~~l~~--h~~~V~~l~~--------~~~~L~sgs~dg~I~iwd~~~~~~-~~~~ 413 (609)
. ++|+.|..+|.|.|||+...+ .+..+.+ ...+|..++. .+.+|+....+ +..|.+.-... ....
T Consensus 247 e~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~v 324 (463)
T KOG1645|consen 247 ERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCV 324 (463)
T ss_pred CcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcc
Confidence 6 788899999999999997543 2222222 2234444433 23444444332 44555542211 1111
Q ss_pred Ec-cCCCCeEEEEEccCCCEEEEEeCCC-----------------cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEc
Q psy4876 414 LQ-NHTQEVCGLKWSPDGRYLASGGNDN-----------------LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWC 475 (609)
Q Consensus 414 ~~-~h~~~V~~l~~spdg~~lasgs~Dg-----------------~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 475 (609)
+. +..+.+.++..++..+.++.....+ --.||-.+.+.- ......+ +.. .++.-.
T Consensus 325 lele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~---Gs~~~kl--~t~--~ai~~~ 397 (463)
T KOG1645|consen 325 LELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYF---GSKQTKL--STT--QAIRAV 397 (463)
T ss_pred cccCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeeccccc---CCccccc--ccc--cceecc
Confidence 11 1233444555555334433322210 012222221100 0000000 110 112123
Q ss_pred CCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCC--CCeEEEEEecCCCeEEEEECC
Q psy4876 476 PWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSD--YKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 476 p~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~--g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
++. ++++.-+ ...+.+.+||..+++.++.+....+|..++...- +.+|++. .|..++||..+
T Consensus 398 ~~n-n~iv~~g-d~tn~lil~D~~s~evvQ~l~~~epv~Dicp~~~n~~syLa~L---Td~~v~Iyk~e 461 (463)
T KOG1645|consen 398 EDN-NYIVVVG-DSTNELILQDPHSFEVVQTLALSEPVLDICPNDTNGSSYLALL---TDDRVHIYKNE 461 (463)
T ss_pred ccc-cEEEEec-CCcceeEEeccchhheeeecccCcceeecceeecCCcchhhhe---ecceEEEEecC
Confidence 334 4444332 4789999999999999999999888888887643 4466654 48889988754
No 337
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.03 E-value=0.00015 Score=77.43 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=87.9
Q ss_pred cceeeeeeecCCCCeEEEEEccCC-CEEEEE----eCCCe----EEEEeCCCCeeEEE---ecCCCCceEEEEec--CCE
Q psy4876 324 RAIDHLMDLEGNENVCSVAWIQEG-YMLGVG----TSLGT----VQLWDVSAKKKCRT---MDGHDVRVGALAWN--TYI 389 (609)
Q Consensus 324 ~~~~~l~~~~h~~~V~~v~~spdg-~~Lasg----s~dg~----I~iwd~~~~~~~~~---l~~h~~~V~~l~~~--~~~ 389 (609)
++.+.+..+..+....++.|+-.. ..+.+. +.+|. -.+|++..++..+. --.....|.+.+++ ...
T Consensus 194 ~klEvL~yirTE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~k 273 (545)
T PF11768_consen 194 GKLEVLSYIRTENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDK 273 (545)
T ss_pred CcEEEEEEEEecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccce
Confidence 456666666655666788888743 444442 33443 35677765432211 11467788999995 689
Q ss_pred EEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q psy4876 390 LSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPG 450 (609)
Q Consensus 390 L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~ 450 (609)
|+.|+.||.|.+||...+ +.......-.++.++|+|+|.+|++|+.-|.+.+||+.-.
T Consensus 274 LvlGC~DgSiiLyD~~~~---~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 274 LVLGCEDGSIILYDTTRG---VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred EEEEecCCeEEEEEcCCC---eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 999999999999999865 2223344566788999999999999999999999998754
No 338
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.02 E-value=0.0034 Score=64.01 Aligned_cols=248 Identities=13% Similarity=0.145 Sum_probs=136.0
Q ss_pred CCeEEEEEccCCCEEEEEe----------CCCeEEEEeCCCCeeEEEecCCCC-ceE--------EEEecCCEEEEEe--
Q psy4876 336 ENVCSVAWIQEGYMLGVGT----------SLGTVQLWDVSAKKKCRTMDGHDV-RVG--------ALAWNTYILSSGS-- 394 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs----------~dg~I~iwd~~~~~~~~~l~~h~~-~V~--------~l~~~~~~L~sgs-- 394 (609)
+..-.+..+|+++.++++. ..-.|.+||..+-.....+.--.. +.. .+.-++++++...
T Consensus 36 g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~T 115 (342)
T PF06433_consen 36 GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFT 115 (342)
T ss_dssp ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEES
T ss_pred ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccC
Confidence 4445577899999888743 334699999999877665442221 221 2222444444432
Q ss_pred cCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccE-EEE
Q psy4876 395 RCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAV-KAI 472 (609)
Q Consensus 395 ~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V-~~l 472 (609)
-.-.|.|.|+..+ ..+..+.. .+ |.+.+ | ..+-|.+-|.||.+.-..+....... .+.-..+.....++ ..-
T Consensus 116 Pa~SVtVVDl~~~-kvv~ei~~-PG--C~~iy-P~~~~~F~~lC~DGsl~~v~Ld~~Gk~~-~~~t~~F~~~~dp~f~~~ 189 (342)
T PF06433_consen 116 PATSVTVVDLAAK-KVVGEIDT-PG--CWLIY-PSGNRGFSMLCGDGSLLTVTLDADGKEA-QKSTKVFDPDDDPLFEHP 189 (342)
T ss_dssp SSEEEEEEETTTT-EEEEEEEG-TS--EEEEE-EEETTEEEEEETTSCEEEEEETSTSSEE-EEEEEESSTTTS-B-S--
T ss_pred CCCeEEEEECCCC-ceeeeecC-CC--EEEEE-ecCCCceEEEecCCceEEEEECCCCCEe-EeeccccCCCCccccccc
Confidence 2234566666654 23333321 11 22222 3 22457788889999998888432111 01111121112222 233
Q ss_pred EEcCCCCcEEEEEeccCCCeEEEEECCCCcee--EEEcC-----------CCCeEEEEEcCCCCeEEEEE-ecCCC----
Q psy4876 473 AWCPWSPNVLASGGGTADRHIYFWNVSSGACL--DSIDT-----------KSQVCALLWNSDYKELVSAH-GFAQN---- 534 (609)
Q Consensus 473 ~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~--~~~~~-----------~~~v~sl~~s~~g~~l~~~s-G~~dg---- 534 (609)
++...+..++.. +..|.|+-.|+...... ..+.. .+...-+++++..+.|++.. ...++
T Consensus 190 ~~~~~~~~~~F~---Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKd 266 (342)
T PF06433_consen 190 AYSRDGGRLYFV---SYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKD 266 (342)
T ss_dssp EEETTTTEEEEE---BTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS
T ss_pred ceECCCCeEEEE---ecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccC
Confidence 344444444443 47999999988765422 22221 12344577887666665542 21222
Q ss_pred ---eEEEEECCCCceEEEEeCCCCCEEEEEEeCCCC-EEEEEE-CCCCEEEEEcCCCccchhhh
Q psy4876 535 ---QLIIWKYPSLVKVAELHGHSARVLNLAMSPDET-TVLSAG-ADETLRLWKIFEKVKSKKKE 593 (609)
Q Consensus 535 ---~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~-~L~s~s-~Dg~I~iWdl~~~~~~~k~~ 593 (609)
.|.+||..+++.+..+.. ...+.+|+.+.|.+ +|++.+ .++.|.+||..+++..++.+
T Consensus 267 pgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 267 PGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp -EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred CceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 477889999999998863 24578999998776 666554 57899999999987665543
No 339
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.91 E-value=0.0011 Score=71.08 Aligned_cols=187 Identities=17% Similarity=0.229 Sum_probs=119.4
Q ss_pred CCCCeEEEEEccCCCEEEEE---eCC-CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCC-EEEEEecCCe--EEEEEc
Q psy4876 334 GNENVCSVAWIQEGYMLGVG---TSL-GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTY-ILSSGSRCGN--IVHHDV 404 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasg---s~d-g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~-~L~sgs~dg~--I~iwd~ 404 (609)
....+..-+|+|++..++.. ... ..+.++|+.+++....+. ..+.-...+| +|. ++++...||. |++.|+
T Consensus 191 ~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl 269 (425)
T COG0823 191 SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDL 269 (425)
T ss_pred cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcC
Confidence 34567778999999665543 222 469999999887655554 2222233345 554 5556667776 566677
Q ss_pred CCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-C--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcE
Q psy4876 405 RSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND-N--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 405 ~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~D-g--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 481 (609)
.... ...+....+.-+.-.|+|||++++..+.. | .|.++|.+... . ..+......-..-.|+|+|..+
T Consensus 270 ~~~~--~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~------~-~riT~~~~~~~~p~~SpdG~~i 340 (425)
T COG0823 270 DGKN--LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ------V-TRLTFSGGGNSNPVWSPDGDKI 340 (425)
T ss_pred CCCc--ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc------e-eEeeccCCCCcCccCCCCCCEE
Confidence 7653 33344333333467899999998887653 3 47777777652 2 3333333333377899999888
Q ss_pred EEEEeccCCCe--EEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecC
Q psy4876 482 LASGGGTADRH--IYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFA 532 (609)
Q Consensus 482 lasggGs~Dg~--I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~ 532 (609)
+.... .+|. |.+.|+.++..++.+........-.|.+++..++..++..
T Consensus 341 ~~~~~--~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~~~ 391 (425)
T COG0823 341 VFESS--SGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSGQG 391 (425)
T ss_pred EEEec--cCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEeccCC
Confidence 77762 3454 7777777766566666666666778899999988876533
No 340
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.91 E-value=0.015 Score=62.47 Aligned_cols=179 Identities=15% Similarity=0.083 Sum_probs=97.5
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCe------eEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCC
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK------KCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRD 408 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~------~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~ 408 (609)
.+.|.++.|+.+.. |++-..||.+++||+.... .+.........+....+.+.-++.-..++.+.+..--...
T Consensus 80 ~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~GivvLt~~~~~~~v~n~~~~ 158 (410)
T PF04841_consen 80 SGRIVGMGWTDDEE-LVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNGIVVLTGNNRFYVVNNIDEP 158 (410)
T ss_pred CCCEEEEEECCCCe-EEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCCEEEECCCCeEEEEeCcccc
Confidence 38999999988654 4556788999999986323 1111122223333333321223333344555444322211
Q ss_pred eeEEEEc---c-----CCC-CeE-EEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCC
Q psy4876 409 HKVALLQ---N-----HTQ-EVC-GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWS 478 (609)
Q Consensus 409 ~~~~~~~---~-----h~~-~V~-~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~ 478 (609)
.....+. . |.. .+. ...++.+....+....++.+.+.+-... ..+ ...+++..++.+|++
T Consensus 159 ~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~---------~~i-~~~~~i~~iavSpng 228 (410)
T PF04841_consen 159 VKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSF---------KQI-DSDGPIIKIAVSPNG 228 (410)
T ss_pred chhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccc---------ccc-cCCCCeEEEEECCCC
Confidence 1111110 0 000 000 0234445555555555566664443221 112 234689999999999
Q ss_pred CcEEEEEeccCCCeEEEEECCCCceeEEEcCC--CCeEEEEEcCCCCeEEE
Q psy4876 479 PNVLASGGGTADRHIYFWNVSSGACLDSIDTK--SQVCALLWNSDYKELVS 527 (609)
Q Consensus 479 ~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~--~~v~sl~~s~~g~~l~~ 527 (609)
+.+.+.. .+|.+.+....-.+.+..++.. .....+.|+-+.-.++.
T Consensus 229 ~~iAl~t---~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~ 276 (410)
T PF04841_consen 229 KFIALFT---DSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLS 276 (410)
T ss_pred CEEEEEE---CCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEE
Confidence 7554443 6899999988777777777665 57788889877544433
No 341
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.86 E-value=0.0034 Score=67.62 Aligned_cols=224 Identities=13% Similarity=0.114 Sum_probs=113.6
Q ss_pred ceeEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 269 DYYLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 269 ~~~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
+.+...|.++|++ .++++.||...|+.... .. .. ..+....++|.+.+
T Consensus 32 ~~~p~~ls~npngr~v~V~g~geY~iyt~~~-------------------------~r--~k----~~G~g~~~vw~~~n 80 (443)
T PF04053_consen 32 EIYPQSLSHNPNGRFVLVCGDGEYEIYTALA-------------------------WR--NK----AFGSGLSFVWSSRN 80 (443)
T ss_dssp SS--SEEEE-TTSSEEEEEETTEEEEEETTT-------------------------TE--EE----EEEE-SEEEE-TSS
T ss_pred CcCCeeEEECCCCCEEEEEcCCEEEEEEccC-------------------------Cc--cc----ccCceeEEEEecCc
Confidence 4557789999986 88889999999998543 11 11 12445678899855
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEc
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWS 427 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 427 (609)
.+|+-..++.|.|+.--+.+....+... ..+..|-. |.+|...+.+ .|.+||+.++ ..+..+... .|..+.|+
T Consensus 81 -~yAv~~~~~~I~I~kn~~~~~~k~i~~~-~~~~~If~-G~LL~~~~~~-~i~~yDw~~~-~~i~~i~v~--~vk~V~Ws 153 (443)
T PF04053_consen 81 -RYAVLESSSTIKIYKNFKNEVVKSIKLP-FSVEKIFG-GNLLGVKSSD-FICFYDWETG-KLIRRIDVS--AVKYVIWS 153 (443)
T ss_dssp -EEEEE-TTS-EEEEETTEE-TT-----S-S-EEEEE--SSSEEEEETT-EEEEE-TTT---EEEEESS---E-EEEEE-
T ss_pred -cEEEEECCCeEEEEEcCccccceEEcCC-cccceEEc-CcEEEEECCC-CEEEEEhhHc-ceeeEEecC--CCcEEEEE
Confidence 4666666888999743333332233321 23444433 7777766554 8999999987 466666533 38999999
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCC----CCC-CCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc
Q psy4876 428 PDGRYLASGGNDNLLNIWSGVPG----QHT-FSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA 502 (609)
Q Consensus 428 pdg~~lasgs~Dg~I~iwd~~~~----~~~-~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~ 502 (609)
++|.++|..+.+ .++|++.... ... .....+..+..-...|.+.+|..+ .++.+. ..+|+. +-.|+
T Consensus 154 ~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT----~~~lkY--l~~Ge 224 (443)
T PF04053_consen 154 DDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTT----SNHLKY--LVNGE 224 (443)
T ss_dssp TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-----TTEEEE--EETTE
T ss_pred CCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEc----CCeEEE--EEcCC
Confidence 999999998865 6788765421 000 000123333322567899999875 445542 237766 33344
Q ss_pred eeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 503 CLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 503 ~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
.-..-....++.-+.+.+..+.++..- .++.|..+.+
T Consensus 225 ~~~i~~ld~~~yllgy~~~~~~ly~~D--r~~~v~~~~l 261 (443)
T PF04053_consen 225 TGIIAHLDKPLYLLGYLPKENRLYLID--RDGNVISYEL 261 (443)
T ss_dssp EEEEEE-SS--EEEEEETTTTEEEEE---TT--EEEEE-
T ss_pred cceEEEcCCceEEEEEEccCCEEEEEE--CCCCEEEEEE
Confidence 322222234555555555545555432 4555555443
No 342
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.86 E-value=0.017 Score=62.31 Aligned_cols=249 Identities=11% Similarity=0.080 Sum_probs=133.6
Q ss_pred eEEEEEccCCCEEEEEe-CCC----eEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecC-----------CeE
Q psy4876 338 VCSVAWIQEGYMLGVGT-SLG----TVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRC-----------GNI 399 (609)
Q Consensus 338 V~~v~~spdg~~Lasgs-~dg----~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~d-----------g~I 399 (609)
+..++++|+|++||.+- ..| .|+++|+.+++.+...-.. .....+.| ++..|+....+ ..|
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 33678999999998763 333 5999999999776532111 12223889 44555444322 237
Q ss_pred EEEEcCCCCee-EEEEccCCC-C-eEEEEEccCCCEEEEEeCC----CcEEEEeCCCCCCCCCccceEeecCCcccEE-E
Q psy4876 400 VHHDVRSRDHK-VALLQNHTQ-E-VCGLKWSPDGRYLASGGND----NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVK-A 471 (609)
Q Consensus 400 ~iwd~~~~~~~-~~~~~~h~~-~-V~~l~~spdg~~lasgs~D----g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~-~ 471 (609)
+.|.+.+.... ...+..... . ...+..++|+++|+..... ..|++.|+..+. ........+......+. .
T Consensus 205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~--~~~~~~~~l~~~~~~~~~~ 282 (414)
T PF02897_consen 205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGG--SPDAKPKLLSPREDGVEYY 282 (414)
T ss_dssp EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTT--TSS-SEEEEEESSSS-EEE
T ss_pred EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccC--CCcCCcEEEeCCCCceEEE
Confidence 88888776433 334443332 2 6788999999997764432 357888887641 00023333333333343 3
Q ss_pred EEEcCCCCcEEEEEeccCCCeEEEEECCCCce---eEEE-cCCCCeEEEEEcCCCCeEEEEE-ecCCCeEEEEECCCCce
Q psy4876 472 IAWCPWSPNVLASGGGTADRHIYFWNVSSGAC---LDSI-DTKSQVCALLWNSDYKELVSAH-GFAQNQLIIWKYPSLVK 546 (609)
Q Consensus 472 l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~---~~~~-~~~~~v~sl~~s~~g~~l~~~s-G~~dg~I~Iwd~~~~~~ 546 (609)
+... .+..++.+..+...+.|...++..... ...+ .....+.-..+...+.+|+... -.....|+++++..+..
T Consensus 283 v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~ 361 (414)
T PF02897_consen 283 VDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKE 361 (414)
T ss_dssp EEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEE
T ss_pred EEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcE
Confidence 3333 333444554444568888889887653 2233 3333333333334444555432 22234688999884444
Q ss_pred EEEEeC-CCCCEEEEEEeCCCCEE-EEEEC---CCCEEEEEcCCCccch
Q psy4876 547 VAELHG-HSARVLNLAMSPDETTV-LSAGA---DETLRLWKIFEKVKSK 590 (609)
Q Consensus 547 ~~~l~~-h~~~V~~l~~spdg~~L-~s~s~---Dg~I~iWdl~~~~~~~ 590 (609)
...+.. -.+.|..+...+++..+ ++.+. -++|..||+.+++...
T Consensus 362 ~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~ 410 (414)
T PF02897_consen 362 SREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTL 410 (414)
T ss_dssp EEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEE
T ss_pred EeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEE
Confidence 444433 33446666666666544 33332 3678888888877543
No 343
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.84 E-value=0.0039 Score=68.50 Aligned_cols=221 Identities=10% Similarity=0.065 Sum_probs=127.3
Q ss_pred EEEccCCCEEEE-EeCCCeEEEEeCCCCeeEEEecCCC-CceEEEEecCCEEEEEecC----CeEEEEEcCCCCeeEEEE
Q psy4876 341 VAWIQEGYMLGV-GTSLGTVQLWDVSAKKKCRTMDGHD-VRVGALAWNTYILSSGSRC----GNIVHHDVRSRDHKVALL 414 (609)
Q Consensus 341 v~~spdg~~Las-gs~dg~I~iwd~~~~~~~~~l~~h~-~~V~~l~~~~~~L~sgs~d----g~I~iwd~~~~~~~~~~~ 414 (609)
+=+.+||+.+.. .-..+.+.+.|.++.+...++.... .....+..++.++++.+.+ .++..-+..... .+..+
T Consensus 198 ~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d-~~vvf 276 (635)
T PRK02888 198 IPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERD-WVVVF 276 (635)
T ss_pred cccCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCc-eEEEE
Confidence 345667765533 2334677888888776665554322 2233333367777766532 223333332221 11111
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEE
Q psy4876 415 QNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIY 494 (609)
Q Consensus 415 ~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~ 494 (609)
.... + -++.++|++...+ ++.|.+.|..+.... ....+..+. -......+.++|||+++++++. .+.++.
T Consensus 277 ni~~--i--ea~vkdGK~~~V~--gn~V~VID~~t~~~~-~~~v~~yIP-VGKsPHGV~vSPDGkylyVank--lS~tVS 346 (635)
T PRK02888 277 NIAR--I--EEAVKAGKFKTIG--GSKVPVVDGRKAANA-GSALTRYVP-VPKNPHGVNTSPDGKYFIANGK--LSPTVT 346 (635)
T ss_pred chHH--H--HHhhhCCCEEEEC--CCEEEEEECCccccC-CcceEEEEE-CCCCccceEECCCCCEEEEeCC--CCCcEE
Confidence 1100 0 1334578876663 678999998871000 003333333 3345678999999998888874 899999
Q ss_pred EEECCCCc------------eeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC----------CceEEEEeC
Q psy4876 495 FWNVSSGA------------CLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS----------LVKVAELHG 552 (609)
Q Consensus 495 iwd~~t~~------------~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~----------~~~~~~l~~ 552 (609)
|.|+.+.+ .+..+...-.....+|.++|....+ =+-|.+|..|++.. ...+..+.-
T Consensus 347 VIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~ayts--lf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV 424 (635)
T PRK02888 347 VIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTT--LFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDV 424 (635)
T ss_pred EEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEe--EeecceeEEEehHHHHHHhccccCCcceecccC
Confidence 99998755 3455555556778899999875544 45799999999865 233333433
Q ss_pred CCCC-----EEEEEEeCCCCEEEEEEC
Q psy4876 553 HSAR-----VLNLAMSPDETTVLSAGA 574 (609)
Q Consensus 553 h~~~-----V~~l~~spdg~~L~s~s~ 574 (609)
|-.+ ...=.-.|||++|++...
T Consensus 425 ~y~pgh~~~~~g~t~~~dgk~l~~~nk 451 (635)
T PRK02888 425 HYQPGHNHASMGETKEADGKWLVSLNK 451 (635)
T ss_pred CCccceeeecCCCcCCCCCCEEEEccc
Confidence 3222 111123578888887643
No 344
>KOG4649|consensus
Probab=97.82 E-value=0.012 Score=56.97 Aligned_cols=130 Identities=12% Similarity=0.045 Sum_probs=90.7
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK 425 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 425 (609)
..+++.|+..+.+.--|..+|+.+..-. -..++.+-+. -+++++.|+..|.+++.++.++. .+..+.....-=....
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs-~~w~f~~~~~vk~~a~ 100 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGS-QIWNFVILETVKVRAQ 100 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEEECCEEEEEEccCcEEEEEecchh-heeeeeehhhhccceE
Confidence 3678889999999999999988765433 2344444333 57889999999999999999985 4444443332223345
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEE
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLAS 484 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llas 484 (609)
..+++.++..|+.|+..+..|.++. ..+.+.+-..+...+-+..|-...|+++
T Consensus 101 ~d~~~glIycgshd~~~yalD~~~~------~cVykskcgG~~f~sP~i~~g~~sly~a 153 (354)
T KOG4649|consen 101 CDFDGGLIYCGSHDGNFYALDPKTY------GCVYKSKCGGGTFVSPVIAPGDGSLYAA 153 (354)
T ss_pred EcCCCceEEEecCCCcEEEeccccc------ceEEecccCCceeccceecCCCceEEEE
Confidence 6778999999999999999999987 5666665444444455566633344443
No 345
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.81 E-value=0.02 Score=63.09 Aligned_cols=184 Identities=12% Similarity=0.113 Sum_probs=107.5
Q ss_pred CCCeEEEEeCCCCeeEEEecCCCC--------------------ce-EEEEec--CCEEEEEecCC--------------
Q psy4876 355 SLGTVQLWDVSAKKKCRTMDGHDV--------------------RV-GALAWN--TYILSSGSRCG-------------- 397 (609)
Q Consensus 355 ~dg~I~iwd~~~~~~~~~l~~h~~--------------------~V-~~l~~~--~~~L~sgs~dg-------------- 397 (609)
.+|.|..+|..+|+.+-.+..... .| ...+.+ +..++.++.++
T Consensus 173 ~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~ 252 (488)
T cd00216 173 VRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDN 252 (488)
T ss_pred CCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCC
Confidence 367899999999988776643211 01 012232 46777776655
Q ss_pred ----eEEEEEcCCCCeeEEEEc-c-CCC----CeEEEEEc----cCCC---EEEEEeCCCcEEEEeCCCCCCCCCccceE
Q psy4876 398 ----NIVHHDVRSRDHKVALLQ-N-HTQ----EVCGLKWS----PDGR---YLASGGNDNLLNIWSGVPGQHTFSTQPIH 460 (609)
Q Consensus 398 ----~I~iwd~~~~~~~~~~~~-~-h~~----~V~~l~~s----pdg~---~lasgs~Dg~I~iwd~~~~~~~~~~~~~~ 460 (609)
.|.-+|..+++ .+..++ . |.. ......+. -+|. .++.++.+|.++..|.+++ +.+.
T Consensus 253 ~~~~~l~Ald~~tG~-~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG------~~~W 325 (488)
T cd00216 253 LYTDSIVALDADTGK-VKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTG------KLIS 325 (488)
T ss_pred CceeeEEEEcCCCCC-EEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCC------cEee
Confidence 78999998885 444433 1 110 00001111 1343 5778888999999999999 4443
Q ss_pred eecCCcccEEEEEEcCCCCcEEEEEe---------------ccCCCeEEEEECCCCceeEEEcCC---------CCeEEE
Q psy4876 461 SLSRHQAAVKAIAWCPWSPNVLASGG---------------GTADRHIYFWNVSSGACLDSIDTK---------SQVCAL 516 (609)
Q Consensus 461 ~~~~h~~~V~~l~~sp~~~~llasgg---------------Gs~Dg~I~iwd~~t~~~~~~~~~~---------~~v~sl 516 (609)
..... ...++..| ..+++... ...++.|.-.|+.+|+.+-..... .....-
T Consensus 326 ~~~~~---~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~ 400 (488)
T cd00216 326 ARPEV---EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGG 400 (488)
T ss_pred EeEee---ccccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCc
Confidence 33211 11223333 12322110 124688999999999988777654 111110
Q ss_pred EEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC
Q psy4876 517 LWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG 552 (609)
Q Consensus 517 ~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~ 552 (609)
...-.+..+++ |..+|.|+.+|..+++.+..++-
T Consensus 401 ~~~~~g~~v~~--g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 401 SLATAGNLVFA--GAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred ceEecCCeEEE--ECCCCeEEEEECCCCceeeEEEC
Confidence 11124456666 44799999999999999988764
No 346
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.81 E-value=0.02 Score=61.53 Aligned_cols=197 Identities=10% Similarity=0.086 Sum_probs=105.4
Q ss_pred eEEEEeCCCCeeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCC-----eeEEEEccCCCCeEEEEEccCCC
Q psy4876 358 TVQLWDVSAKKKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRD-----HKVALLQNHTQEVCGLKWSPDGR 431 (609)
Q Consensus 358 ~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~-----~~~~~~~~h~~~V~~l~~spdg~ 431 (609)
.|+||+.. |+.+..+.-..+.+.++.| +...|++...||.++++|+.... ..+....-....+....+..+|
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G- 139 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNG- 139 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCC-
Confidence 48999865 5666666555589999999 46788888999999999986331 0011111111222223333355
Q ss_pred EEEEEeCCCcEEEEeCCCCCCCCCccceEeecC-------CcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCcee
Q psy4876 432 YLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR-------HQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 432 ~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~-------h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~ 504 (609)
++.-..++.|++.+-..... ..+....... +........++.+....+... .++.+.+.+-...
T Consensus 140 -ivvLt~~~~~~~v~n~~~~~--~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~---~g~~i~~i~~~~~--- 210 (410)
T PF04841_consen 140 -IVVLTGNNRFYVVNNIDEPV--KLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLA---NGETIYIIDENSF--- 210 (410)
T ss_pred -EEEECCCCeEEEEeCccccc--hhhccccCCCcccccccccccccceEeecCcceEEEEe---cCCEEEEEEcccc---
Confidence 33333445555443222100 0000000000 100000022333332222222 3455554443221
Q ss_pred EEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC-CCCEEEEEEeCCCC
Q psy4876 505 DSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH-SARVLNLAMSPDET 567 (609)
Q Consensus 505 ~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h-~~~V~~l~~spdg~ 567 (609)
..+...+++..++.||+|++++..+ .+|.+.|....-.+.+.++... ......|.|.-+..
T Consensus 211 ~~i~~~~~i~~iavSpng~~iAl~t--~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 211 KQIDSDGPIIKIAVSPNGKFIALFT--DSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred ccccCCCCeEEEEECCCCCEEEEEE--CCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 1134456899999999999999876 6899999887666666666433 34556777765543
No 347
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.79 E-value=0.0084 Score=63.19 Aligned_cols=243 Identities=16% Similarity=0.193 Sum_probs=125.6
Q ss_pred EEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEE
Q psy4876 272 LNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYML 350 (609)
Q Consensus 272 v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~L 350 (609)
+....|||++ .++...++.|++++..++ .....+-++...... |...-+.+-+--+.-..+-|||||++|
T Consensus 45 ~~~~~~sP~g~~~~~v~~~nly~~~~~~~----~~~~lT~dg~~~i~n-----G~~dwvyeEEv~~~~~~~~WSpd~~~l 115 (353)
T PF00930_consen 45 LQDAKWSPDGKYIAFVRDNNLYLRDLATG----QETQLTTDGEPGIYN-----GVPDWVYEEEVFDRRSAVWWSPDSKYL 115 (353)
T ss_dssp BSEEEE-SSSTEEEEEETTEEEEESSTTS----EEEESES--TTTEEE-----SB--HHHHHHTSSSSBSEEE-TTSSEE
T ss_pred cccceeecCCCeeEEEecCceEEEECCCC----CeEEeccccceeEEc-----CccceeccccccccccceEECCCCCEE
Confidence 4458899996 888889999999998763 222222222111111 100000000001123467888888888
Q ss_pred EEEeCC-Ce-----------------------------------EEEEeCCCCeeEE--Ee---cCCCCceEEEEe--cC
Q psy4876 351 GVGTSL-GT-----------------------------------VQLWDVSAKKKCR--TM---DGHDVRVGALAW--NT 387 (609)
Q Consensus 351 asgs~d-g~-----------------------------------I~iwd~~~~~~~~--~l---~~h~~~V~~l~~--~~ 387 (609)
|....| .. +.|+|+.+++... .. ..-..-+..+.| ++
T Consensus 116 a~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~ 195 (353)
T PF00930_consen 116 AFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDG 195 (353)
T ss_dssp EEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETT
T ss_pred EEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCC
Confidence 765432 11 2334444443211 11 123345667777 34
Q ss_pred CEEEEE--ecCC---eEEEEEcCCCCeeEEEEccCCCC---eEEEEEc-cCCC-EEEEEeCCCc--EEEEeCCCCCCCCC
Q psy4876 388 YILSSG--SRCG---NIVHHDVRSRDHKVALLQNHTQE---VCGLKWS-PDGR-YLASGGNDNL--LNIWSGVPGQHTFS 455 (609)
Q Consensus 388 ~~L~sg--s~dg---~I~iwd~~~~~~~~~~~~~h~~~---V~~l~~s-pdg~-~lasgs~Dg~--I~iwd~~~~~~~~~ 455 (609)
..|+.. .++. .+.++|..++...+......... -..+.|. +++. +|.....||- |++++...+
T Consensus 196 ~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~----- 270 (353)
T PF00930_consen 196 KRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGG----- 270 (353)
T ss_dssp EEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSS-----
T ss_pred cEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccc-----
Confidence 423322 2322 35666776654332222222222 2245554 6555 4444556665 555555544
Q ss_pred ccceEeecCCcccEEE-EEEcCCCCcEEEEEecc--CCCeEEEEECCCCceeEEEcCCCCe-EEEEEcCCCCeEEEEEe
Q psy4876 456 TQPIHSLSRHQAAVKA-IAWCPWSPNVLASGGGT--ADRHIYFWNVSSGACLDSIDTKSQV-CALLWNSDYKELVSAHG 530 (609)
Q Consensus 456 ~~~~~~~~~h~~~V~~-l~~sp~~~~llasggGs--~Dg~I~iwd~~t~~~~~~~~~~~~v-~sl~~s~~g~~l~~~sG 530 (609)
....+....-.|.. +.|++++..++.++.+. ....|+.-++..+..+..+...... ..+.|+|++++++..+.
T Consensus 271 --~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 271 --KPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYS 347 (353)
T ss_dssp --EEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEE
T ss_pred --ceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEc
Confidence 34566666667744 78899888888887532 2456777777734555666555444 49999999999987653
No 348
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.79 E-value=0.0097 Score=63.28 Aligned_cols=248 Identities=12% Similarity=0.112 Sum_probs=127.4
Q ss_pred eEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCc-------------cccccccccc-cc---cceeeeee
Q psy4876 271 YLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPL-------------VQELTSKCIQ-DN---RAIDHLMD 331 (609)
Q Consensus 271 ~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~-~~---~~~~~l~~ 331 (609)
.|..+.++++. ++++...|.|.||.+..++.... ....+. ...+...... +. ..+..+.-
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l 81 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGN-REQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL 81 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE-------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCc-cCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence 46788898873 66677789999988876422210 000000 0111111100 00 11334444
Q ss_pred ec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEe--cC------CCCceEEEEe-------cC---CEEEE
Q psy4876 332 LE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTM--DG------HDVRVGALAW-------NT---YILSS 392 (609)
Q Consensus 332 ~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l--~~------h~~~V~~l~~-------~~---~~L~s 392 (609)
+. ..+.|++++.|.-| ++|+|..+|.+.|.|++....+..- .. ....|+++.| ++ -.|++
T Consensus 82 ~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v 160 (395)
T PF08596_consen 82 LDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV 160 (395)
T ss_dssp E---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred eeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence 44 57999999998544 9999999999999999877766542 22 3456888888 22 47889
Q ss_pred EecCCeEEEEEcCC-C-C-ee---EEEEccCCCCeEEEE-EccC-----------------C---CEEEEEeCCCcEEEE
Q psy4876 393 GSRCGNIVHHDVRS-R-D-HK---VALLQNHTQEVCGLK-WSPD-----------------G---RYLASGGNDNLLNIW 445 (609)
Q Consensus 393 gs~dg~I~iwd~~~-~-~-~~---~~~~~~h~~~V~~l~-~spd-----------------g---~~lasgs~Dg~I~iw 445 (609)
|...|.+.+|.+.- . + .. ......+.+.|..|. ++.+ | ..+++...+..++++
T Consensus 161 GTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~ 240 (395)
T PF08596_consen 161 GTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVF 240 (395)
T ss_dssp EETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE
T ss_pred EeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEE
Confidence 99999999998752 1 1 11 112224566666665 3221 0 123333446789999
Q ss_pred eCCCCCCCCCccceEeecCCcccEEEEEEcC----CCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC-----CeEEE
Q psy4876 446 SGVPGQHTFSTQPIHSLSRHQAAVKAIAWCP----WSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS-----QVCAL 516 (609)
Q Consensus 446 d~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp----~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~-----~v~sl 516 (609)
..-+. +..++.....-....+.+-+ .+...|++- ..+|.|++|.+..-+.+..+.... .+...
T Consensus 241 ~~~~~------k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l--~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~s 312 (395)
T PF08596_consen 241 KPPKS------KGAHKSFDDPFLCSSASVVPTISRNGGYCLVCL--FNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSS 312 (395)
T ss_dssp -TT---------EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEE--ETTSEEEEEETTT--EEEEEE-SS---HHHHTT-
T ss_pred eCCCC------cccceeeccccccceEEEEeecccCCceEEEEE--ECCCcEEEEECCCchHhhcccCCCcccccccccc
Confidence 98876 44444443322333444421 122334433 379999999999888887776532 34456
Q ss_pred EEcCCCCeEEEE
Q psy4876 517 LWNSDYKELVSA 528 (609)
Q Consensus 517 ~~s~~g~~l~~~ 528 (609)
.++++|..++..
T Consensus 313 sis~~Gdi~~~~ 324 (395)
T PF08596_consen 313 SISRNGDIFYWT 324 (395)
T ss_dssp EE-TTS-EEEE-
T ss_pred EECCCCCEEEEe
Confidence 678888766654
No 349
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.79 E-value=0.017 Score=57.26 Aligned_cols=203 Identities=13% Similarity=0.194 Sum_probs=113.0
Q ss_pred EEecCCCCceEEEEec---CCEEEEEecCCeEEEEEcCCCCeeEEEEccC-CCCeEEEEEccCCCEEEEEeCCCcEEEEe
Q psy4876 371 RTMDGHDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNH-TQEVCGLKWSPDGRYLASGGNDNLLNIWS 446 (609)
Q Consensus 371 ~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h-~~~V~~l~~spdg~~lasgs~Dg~I~iwd 446 (609)
+.+.+-...+..|+|+ +.++++....+.|..++.. + ..+..+.-. .+..-+|++..++.++++--.++.+.+++
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G-~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~ 92 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-G-KVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT 92 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT----EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-C-CEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence 3555666679999995 3577777788888888875 3 355554433 36688999988887777666689999999
Q ss_pred CCCCCCCCCccceEee-----cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC---CceeEEEc---------C
Q psy4876 447 GVPGQHTFSTQPIHSL-----SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS---GACLDSID---------T 509 (609)
Q Consensus 447 ~~~~~~~~~~~~~~~~-----~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t---~~~~~~~~---------~ 509 (609)
+..............+ ..+...+..|+|++.+..++++- ...-..+|.+.. ...+.... .
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~k---E~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (248)
T PF06977_consen 93 IDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAK---ERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLF 169 (248)
T ss_dssp E----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEE---ESSSEEEEEEESTT-SS--EEEE-HHHH-HT--
T ss_pred EeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEe---CCCChhhEEEccccCccceeeccccccccccce
Confidence 8543211111111112 13456789999999988888765 344444554432 22222111 1
Q ss_pred CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCC---------CCEEEEEEeCCCCEEEEEECCCCEEE
Q psy4876 510 KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHS---------ARVLNLAMSPDETTVLSAGADETLRL 580 (609)
Q Consensus 510 ~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~---------~~V~~l~~spdg~~L~s~s~Dg~I~i 580 (609)
-..+.++.++|....+++.+ .....|.++| ..|+.+..+.-.. ...-.|+|.++|.+ +..+.-+..++
T Consensus 170 ~~d~S~l~~~p~t~~lliLS-~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~L-YIvsEpNlfy~ 246 (248)
T PF06977_consen 170 VRDLSGLSYDPRTGHLLILS-DESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNL-YIVSEPNLFYR 246 (248)
T ss_dssp SS---EEEEETTTTEEEEEE-TTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--E-EEEETTTEEEE
T ss_pred eccccceEEcCCCCeEEEEE-CCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCE-EEEcCCceEEE
Confidence 23688999999987777765 3788899999 6777666553221 24789999999964 44556665554
Q ss_pred E
Q psy4876 581 W 581 (609)
Q Consensus 581 W 581 (609)
|
T Consensus 247 f 247 (248)
T PF06977_consen 247 F 247 (248)
T ss_dssp E
T ss_pred e
Confidence 4
No 350
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.78 E-value=0.059 Score=57.40 Aligned_cols=243 Identities=14% Similarity=0.140 Sum_probs=157.4
Q ss_pred CeEEEEEccCCCEEEEEeC-CCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCC-EEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 337 NVCSVAWIQEGYMLGVGTS-LGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTY-ILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~-~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
....+...+++..+.+... ...+.+.+................-..++. .+. .++....+..|.+.|..... ...
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~-~~~ 110 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNT-VLG 110 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccc-eee
Confidence 5667888888855544432 224555554421111111111122233444 344 55566667899999977653 333
Q ss_pred EEccCCCCeEEEEEccCCCEEEEEeC---CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 413 LLQNHTQEVCGLKWSPDGRYLASGGN---DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 413 ~~~~h~~~V~~l~~spdg~~lasgs~---Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
... -......++++++++.+.++.. ++.+.+.|..+. ..+........+ ..+++.|+|..++++- +.
T Consensus 111 ~~~-vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~------~~~~~~~vG~~P-~~~a~~p~g~~vyv~~--~~ 180 (381)
T COG3391 111 SIP-VGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN------KVTATIPVGNTP-TGVAVDPDGNKVYVTN--SD 180 (381)
T ss_pred Eee-eccCCceEEECCCCCEEEEEecccCCceEEEEeCCCC------eEEEEEecCCCc-ceEEECCCCCeEEEEe--cC
Confidence 332 2226678999999987777665 688999988877 444444433344 8999999998787775 47
Q ss_pred CCeEEEEECCCCceeE-----EEcCCCCeEEEEEcCCCCeEEEEEecC-CCeEEEEECCCCceEEE-EeCCCCCEEEEEE
Q psy4876 490 DRHIYFWNVSSGACLD-----SIDTKSQVCALLWNSDYKELVSAHGFA-QNQLIIWKYPSLVKVAE-LHGHSARVLNLAM 562 (609)
Q Consensus 490 Dg~I~iwd~~t~~~~~-----~~~~~~~v~sl~~s~~g~~l~~~sG~~-dg~I~Iwd~~~~~~~~~-l~~h~~~V~~l~~ 562 (609)
++.|.+.|........ .+........+.++++|.++++..... ++.+.+.|..++..... +..-......+.+
T Consensus 181 ~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~ 260 (381)
T COG3391 181 DNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAV 260 (381)
T ss_pred CCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeE
Confidence 9999999977666553 233445678899999999887764322 36899999988877665 2211114567899
Q ss_pred eCCCCEEEEEECC-CCEEEEEcCCCccch
Q psy4876 563 SPDETTVLSAGAD-ETLRLWKIFEKVKSK 590 (609)
Q Consensus 563 spdg~~L~s~s~D-g~I~iWdl~~~~~~~ 590 (609)
+|+|..+.+.... +.+.+-|..+....+
T Consensus 261 ~p~g~~~yv~~~~~~~V~vid~~~~~v~~ 289 (381)
T COG3391 261 DPAGKAAYVANSQGGTVSVIDGATDRVVK 289 (381)
T ss_pred CCCCCEEEEEecCCCeEEEEeCCCCceee
Confidence 9999998888444 788888877755443
No 351
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.74 E-value=0.043 Score=55.44 Aligned_cols=198 Identities=12% Similarity=0.060 Sum_probs=115.9
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEE--------------ecCCCCceEEEE----ecCCEEEEEecCC
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRT--------------MDGHDVRVGALA----WNTYILSSGSRCG 397 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~--------------l~~h~~~V~~l~----~~~~~L~sgs~dg 397 (609)
..|..+...++-+.|++-+ |+.+.++++..-..... .......+..++ ..+...++.....
T Consensus 36 ~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk 114 (275)
T PF00780_consen 36 SSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKK 114 (275)
T ss_pred ceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECC
Confidence 3499999999877776554 49999999875433221 111233455555 1233333344445
Q ss_pred eEEEEEcCCCC----eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC---------
Q psy4876 398 NIVHHDVRSRD----HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR--------- 464 (609)
Q Consensus 398 ~I~iwd~~~~~----~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~--------- 464 (609)
.|.+|...... .....+. ....+.+++|. ++.|+.|..+ ...+.|+.++.. ..+.....
T Consensus 115 ~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~-~f~~idl~~~~~----~~l~~~~~~~~~~~~~~ 186 (275)
T PF00780_consen 115 KILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSK-GFYLIDLNTGSP----SELLDPSDSSSSFKSRN 186 (275)
T ss_pred EEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeCC-ceEEEecCCCCc----eEEeCccCCcchhhhcc
Confidence 88888776531 1333333 34778899998 5678888764 588899987632 22221111
Q ss_pred -CcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeE--EEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 465 -HQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD--SIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 465 -h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~--~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
...++..+.... + .+|++ .|..-.+.|. .|+..+ .+.-...+.++++ ...++++. .++.|.||++
T Consensus 187 ~~~~~~~~~~~~~-~-e~Ll~----~~~~g~fv~~-~G~~~r~~~i~W~~~p~~~~~--~~pyli~~---~~~~iEV~~~ 254 (275)
T PF00780_consen 187 SSSKPLGIFQLSD-N-EFLLC----YDNIGVFVNK-NGEPSRKSTIQWSSAPQSVAY--SSPYLIAF---SSNSIEVRSL 254 (275)
T ss_pred cCCCceEEEEeCC-c-eEEEE----ecceEEEEcC-CCCcCcccEEEcCCchhEEEE--ECCEEEEE---CCCEEEEEEC
Confidence 122344444433 3 34443 3555555555 344333 4444456666766 34566664 3677999999
Q ss_pred CCCceEEEEeCCC
Q psy4876 542 PSLVKVAELHGHS 554 (609)
Q Consensus 542 ~~~~~~~~l~~h~ 554 (609)
.+++.+..+....
T Consensus 255 ~~~~lvQ~i~~~~ 267 (275)
T PF00780_consen 255 ETGELVQTIPLPN 267 (275)
T ss_pred cCCcEEEEEECCC
Confidence 9999988887543
No 352
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.65 E-value=0.037 Score=57.48 Aligned_cols=202 Identities=13% Similarity=0.133 Sum_probs=114.0
Q ss_pred cceeeeeeecCCCCeEEEEEcc-------CCCEEEEEeC---------C-CeEEEEeCCCC----eeEEEe--cCCCCce
Q psy4876 324 RAIDHLMDLEGNENVCSVAWIQ-------EGYMLGVGTS---------L-GTVQLWDVSAK----KKCRTM--DGHDVRV 380 (609)
Q Consensus 324 ~~~~~l~~~~h~~~V~~v~~sp-------dg~~Lasgs~---------d-g~I~iwd~~~~----~~~~~l--~~h~~~V 380 (609)
........+.....+.+++... ...+|++|+. . |.|.++++... ..+..+ ....+.|
T Consensus 12 ~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V 91 (321)
T PF03178_consen 12 FEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPV 91 (321)
T ss_dssp SSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-E
T ss_pred CeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcc
Confidence 4444444555566666665433 2478888864 2 89999999884 122222 2357889
Q ss_pred EEEEecCCEEEEEecCCeEEEEEcCCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccce
Q psy4876 381 GALAWNTYILSSGSRCGNIVHHDVRSRD-HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPI 459 (609)
Q Consensus 381 ~~l~~~~~~L~sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~ 459 (609)
.+++--+..|+++. .+.|.+|++.... -...........+.++... ++++++|.....|.++..+... ..+
T Consensus 92 ~ai~~~~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~-----~~l 163 (321)
T PF03178_consen 92 TAICSFNGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEEN-----NKL 163 (321)
T ss_dssp EEEEEETTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTT-----E-E
T ss_pred eEhhhhCCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccC-----CEE
Confidence 99887444444443 4789999998875 2222222233366666655 5699999988888877544321 112
Q ss_pred Eee--cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC-------Cc----eeEEEcCCCCeEEE---EEcC--C
Q psy4876 460 HSL--SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS-------GA----CLDSIDTKSQVCAL---LWNS--D 521 (609)
Q Consensus 460 ~~~--~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t-------~~----~~~~~~~~~~v~sl---~~s~--~ 521 (609)
..+ ......+.++.+-+++. .++.+ +.+|.|.++.... +. ....+..+..|+++ .+.+ .
T Consensus 164 ~~va~d~~~~~v~~~~~l~d~~-~~i~~--D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~ 240 (321)
T PF03178_consen 164 ILVARDYQPRWVTAAEFLVDED-TIIVG--DKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSG 240 (321)
T ss_dssp EEEEEESS-BEEEEEEEE-SSS-EEEEE--ETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SS
T ss_pred EEEEecCCCccEEEEEEecCCc-EEEEE--cCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCC
Confidence 222 22355688999987665 44444 4899999988762 22 23445566677777 4444 2
Q ss_pred CC------eEEEEEecCCCeEEE
Q psy4876 522 YK------ELVSAHGFAQNQLII 538 (609)
Q Consensus 522 g~------~l~~~sG~~dg~I~I 538 (609)
+. .++. ++.+|.|.+
T Consensus 241 ~~~~~~~~~i~~--~T~~G~Ig~ 261 (321)
T PF03178_consen 241 SSESPNRPQILY--GTVDGSIGV 261 (321)
T ss_dssp SS-TTEEEEEEE--EETTS-EEE
T ss_pred CCcccccceEEE--EecCCEEEE
Confidence 22 2444 336777763
No 353
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.64 E-value=0.0013 Score=70.48 Aligned_cols=179 Identities=14% Similarity=0.148 Sum_probs=111.4
Q ss_pred eEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe---CC-CcEEEEeCCCCCCCCCccceEeecCCcccEEEEE
Q psy4876 398 NIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGG---ND-NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473 (609)
Q Consensus 398 ~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs---~D-g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~ 473 (609)
.+.+-|.+ + .....+..-...+..-+|+|++..++... .. ..++++|+.++.. ..+..+.++ -...+
T Consensus 174 ~l~~~D~d-g-~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~----~~i~~~~g~---~~~P~ 244 (425)
T COG0823 174 ELALGDYD-G-YNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKR----PVILNFNGN---NGAPA 244 (425)
T ss_pred eEEEEccC-C-cceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCcc----ceeeccCCc---cCCcc
Confidence 34444444 2 23344444556677789999998766542 22 3599999998843 233333333 35678
Q ss_pred EcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCe--EEEEECCCCceEEEEe
Q psy4876 474 WCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQ--LIIWKYPSLVKVAELH 551 (609)
Q Consensus 474 ~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~--I~Iwd~~~~~~~~~l~ 551 (609)
|+|||+.++.+......-.|++.|+.++.........+.-+.-.|+|+|+.++.++. ..|. |.+++.+.... ..+.
T Consensus 245 fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sd-r~G~p~I~~~~~~g~~~-~riT 322 (425)
T COG0823 245 FSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSD-RGGRPQIYLYDLEGSQV-TRLT 322 (425)
T ss_pred CCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeC-CCCCcceEEECCCCCce-eEee
Confidence 999999888887533344577788887774442233344457889999999998853 4554 55556555443 3333
Q ss_pred CCCCCEEEEEEeCCCCEEEEEECC-CC--EEEEEcCCCc
Q psy4876 552 GHSARVLNLAMSPDETTVLSAGAD-ET--LRLWKIFEKV 587 (609)
Q Consensus 552 ~h~~~V~~l~~spdg~~L~s~s~D-g~--I~iWdl~~~~ 587 (609)
.....-..-.|+|||++|+..+.. |. |.+.++.++.
T Consensus 323 ~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 323 FSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred ccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 333322377899999999877753 44 5555555444
No 354
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.60 E-value=0.044 Score=58.38 Aligned_cols=224 Identities=13% Similarity=0.067 Sum_probs=147.8
Q ss_pred CCeEEEEEccCCCEEEEE-eCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEec---CCeEEEEEcCCCCe
Q psy4876 336 ENVCSVAWIQEGYMLGVG-TSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSR---CGNIVHHDVRSRDH 409 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasg-s~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~---dg~I~iwd~~~~~~ 409 (609)
..-..++.++.+..+++. ..+..|.+.|..+.+......... ....+++ ++..+..+.. ++.+.+.|..+..
T Consensus 74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~- 151 (381)
T COG3391 74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNK- 151 (381)
T ss_pred ccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCe-
Confidence 445678888888755544 445889999988777666654332 3344555 4655555544 6888888888764
Q ss_pred eEEEEccCCCCeEEEEEccCCCEEEEEe-CCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEecc
Q psy4876 410 KVALLQNHTQEVCGLKWSPDGRYLASGG-NDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT 488 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spdg~~lasgs-~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs 488 (609)
.......-..+ ..+++.|+|+.+.++. .++.|.+.|........ .........+ ..-..+.+.|++..+.+...++
T Consensus 152 ~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~~~~~-~~P~~i~v~~~g~~~yV~~~~~ 228 (381)
T COG3391 152 VTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSLVGVG-TGPAGIAVDPDGNRVYVANDGS 228 (381)
T ss_pred EEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cccccccccC-CCCceEEECCCCCEEEEEeccC
Confidence 44444333334 8899999999766655 68899999976552110 0000012222 2336789999998888877544
Q ss_pred CCCeEEEEECCCCceeEE-EcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCC---CCEEEEEEe
Q psy4876 489 ADRHIYFWNVSSGACLDS-IDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHS---ARVLNLAMS 563 (609)
Q Consensus 489 ~Dg~I~iwd~~t~~~~~~-~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~---~~V~~l~~s 563 (609)
.++.+...|..++..... ..... ....+..+|+|+.+.+... ..+.+.+.|..+......+.... ..+..+++.
T Consensus 229 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~-~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~ 307 (381)
T COG3391 229 GSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANS-QGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAIS 307 (381)
T ss_pred CCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEec-CCCeEEEEeCCCCceeeeecccccccccceeccce
Confidence 457999999998887665 22222 6788999999999999754 46899999998887776654332 234555555
Q ss_pred CC
Q psy4876 564 PD 565 (609)
Q Consensus 564 pd 565 (609)
+.
T Consensus 308 ~~ 309 (381)
T COG3391 308 PL 309 (381)
T ss_pred ee
Confidence 43
No 355
>KOG3621|consensus
Probab=97.58 E-value=0.0007 Score=73.50 Aligned_cols=137 Identities=13% Similarity=0.165 Sum_probs=91.2
Q ss_pred eEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccce
Q psy4876 380 VGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPI 459 (609)
Q Consensus 380 V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~ 459 (609)
.+|++-++.+++.|+.-|.+++|+-..+........+..+.++.+..|++..++|.|+..|.|.++.+....... ...+
T Consensus 38 lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~-~~~~ 116 (726)
T KOG3621|consen 38 LTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRD-LDYV 116 (726)
T ss_pred EEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCc-ceee
Confidence 344555678888888888888888776654444444455667778899999999999999999999888743211 0111
Q ss_pred Eee-cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC-----ceeEEEcCCCCeEEEEEcC
Q psy4876 460 HSL-SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG-----ACLDSIDTKSQVCALLWNS 520 (609)
Q Consensus 460 ~~~-~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~-----~~~~~~~~~~~v~sl~~s~ 520 (609)
... ..|...|++++|++++..++ +| ...|+|..-.+.+. .....+...+.|..+.+..
T Consensus 117 t~~d~~~~~rVTal~Ws~~~~k~y-sG--D~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q 180 (726)
T KOG3621|consen 117 TPCDKSHKCRVTALEWSKNGMKLY-SG--DSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQ 180 (726)
T ss_pred ccccccCCceEEEEEecccccEEe-ec--CCCceEEEEEechhhhhccccceeeccCcceEEeeccc
Confidence 111 23678999999999996554 44 57899988877762 1112223345565555543
No 356
>KOG4649|consensus
Probab=97.53 E-value=0.1 Score=50.79 Aligned_cols=137 Identities=14% Similarity=0.060 Sum_probs=85.4
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQL 361 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~i 361 (609)
++.++..+.+.--|..+ |++.--..+ ...|.+-+.- -|++++.|+..|.+.+
T Consensus 26 v~igSHs~~~~avd~~s-------------------------G~~~We~il--g~RiE~sa~v-vgdfVV~GCy~g~lYf 77 (354)
T KOG4649|consen 26 VVIGSHSGIVIAVDPQS-------------------------GNLIWEAIL--GVRIECSAIV-VGDFVVLGCYSGGLYF 77 (354)
T ss_pred EEEecCCceEEEecCCC-------------------------CcEEeehhh--CceeeeeeEE-ECCEEEEEEccCcEEE
Confidence 44566677777777777 444322222 2233332222 5788999999999999
Q ss_pred EeCCCCeeEEEecCCC--CceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeC
Q psy4876 362 WDVSAKKKCRTMDGHD--VRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP-DGRYLASGGN 438 (609)
Q Consensus 362 wd~~~~~~~~~l~~h~--~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-dg~~lasgs~ 438 (609)
.+..+|.....+.... ..-..+++++.++..|+.|++.+..|.++.. .+...+-..+...+-+..| ++.+.+ +..
T Consensus 78 l~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~-cVykskcgG~~f~sP~i~~g~~sly~-a~t 155 (354)
T KOG4649|consen 78 LCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYG-CVYKSKCGGGTFVSPVIAPGDGSLYA-AIT 155 (354)
T ss_pred EEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccc-eEEecccCCceeccceecCCCceEEE-Eec
Confidence 9999997776665322 1123356789999999999999999999863 5555544433334445556 444333 333
Q ss_pred CCcEEEEeCC
Q psy4876 439 DNLLNIWSGV 448 (609)
Q Consensus 439 Dg~I~iwd~~ 448 (609)
.|.|.--...
T Consensus 156 ~G~vlavt~~ 165 (354)
T KOG4649|consen 156 AGAVLAVTKN 165 (354)
T ss_pred cceEEEEccC
Confidence 4544443333
No 357
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.53 E-value=0.002 Score=73.22 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=103.6
Q ss_pred CEEEEE-eCCCeEEEEeCCCCeeEEEecCCCCc-eEEEEec-------CCEEEEEecCCeEEEEEcCCCCeeEEEEc---
Q psy4876 348 YMLGVG-TSLGTVQLWDVSAKKKCRTMDGHDVR-VGALAWN-------TYILSSGSRCGNIVHHDVRSRDHKVALLQ--- 415 (609)
Q Consensus 348 ~~Lasg-s~dg~I~iwd~~~~~~~~~l~~h~~~-V~~l~~~-------~~~L~sgs~dg~I~iwd~~~~~~~~~~~~--- 415 (609)
++|+.. .....|+-.|++.|+.+..+..|... |..++-+ +.-.+.|-.+..|..||.|.....+..-.
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~ 573 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQ 573 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccc
Confidence 444443 24467999999999999999987755 7777652 34566788888999999997542222111
Q ss_pred -cCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEE
Q psy4876 416 -NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIY 494 (609)
Q Consensus 416 -~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~ 494 (609)
.......|++-+.+| +||+|+.+|.|++||-- +. .....+.+-..+|..|..+.||.++|+++ +..|.
T Consensus 574 Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~-g~-----~AKT~lp~lG~pI~~iDvt~DGkwilaTc----~tyLl 642 (794)
T PF08553_consen 574 YSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRL-GK-----RAKTALPGLGDPIIGIDVTADGKWILATC----KTYLL 642 (794)
T ss_pred cccCCCceEEEecCCc-eEEEEeCCCcEEeeccc-ch-----hhhhcCCCCCCCeeEEEecCCCcEEEEee----cceEE
Confidence 234567788887777 79999999999999943 31 33334456678999999999999999986 78888
Q ss_pred EEECC
Q psy4876 495 FWNVS 499 (609)
Q Consensus 495 iwd~~ 499 (609)
++++.
T Consensus 643 Li~t~ 647 (794)
T PF08553_consen 643 LIDTL 647 (794)
T ss_pred EEEEe
Confidence 88863
No 358
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.51 E-value=0.19 Score=55.92 Aligned_cols=237 Identities=12% Similarity=0.060 Sum_probs=134.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCC--CC--ceEE--EEecCCEEEEEe------cCCeEEEEEcCCCCeeEEEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGH--DV--RVGA--LAWNTYILSSGS------RCGNIVHHDVRSRDHKVALL 414 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h--~~--~V~~--l~~~~~~L~sgs------~dg~I~iwd~~~~~~~~~~~ 414 (609)
+..+++++.|+.|.-.|..+|+.+-..... .. .+.+ +..++ .++.+. .+|.|..+|..+++ .+..+
T Consensus 120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~-~lW~~ 197 (527)
T TIGR03075 120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGK-LVWRR 197 (527)
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCc-eeEec
Confidence 346777888999999999999987765421 11 1111 12244 444543 26889999998875 33332
Q ss_pred ccCC-------------------------------CCe-EEEEEccCCCEEEEEeCC-----C-----------cEEEEe
Q psy4876 415 QNHT-------------------------------QEV-CGLKWSPDGRYLASGGND-----N-----------LLNIWS 446 (609)
Q Consensus 415 ~~h~-------------------------------~~V-~~l~~spdg~~lasgs~D-----g-----------~I~iwd 446 (609)
..-. ..+ ..+++.+...++..+... + .|.-.|
T Consensus 198 ~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld 277 (527)
T TIGR03075 198 YTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARD 277 (527)
T ss_pred cCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEc
Confidence 2110 011 123566655566555411 1 577778
Q ss_pred CCCCCCCCCccceEeecC--Ccc-------cEEEEEEcCCCC--cEEEEEeccCCCeEEEEECCCCceeEE--------E
Q psy4876 447 GVPGQHTFSTQPIHSLSR--HQA-------AVKAIAWCPWSP--NVLASGGGTADRHIYFWNVSSGACLDS--------I 507 (609)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~--h~~-------~V~~l~~sp~~~--~llasggGs~Dg~I~iwd~~t~~~~~~--------~ 507 (609)
+++++. .-.++. |.. ...-+.+..+|. .+++.+ +.+|.+++.|-.+|+.+.. .
T Consensus 278 ~~TG~~------~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~--~K~G~~~vlDr~tG~~i~~~~~~~~~~w 349 (527)
T TIGR03075 278 PDTGKI------KWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHA--DRNGFFYVLDRTNGKLLSAEPFVDTVNW 349 (527)
T ss_pred cccCCE------EEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEe--CCCceEEEEECCCCceeccccccCCccc
Confidence 888843 333322 211 111122223554 355555 5999999999999988622 1
Q ss_pred ----cCCC--C----------------------------eEEEEEcCCCCeEEEEEec----------------------
Q psy4876 508 ----DTKS--Q----------------------------VCALLWNSDYKELVSAHGF---------------------- 531 (609)
Q Consensus 508 ----~~~~--~----------------------------v~sl~~s~~g~~l~~~sG~---------------------- 531 (609)
.... + -..++++|+...+++..+.
T Consensus 350 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~ 429 (527)
T TIGR03075 350 ATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAG 429 (527)
T ss_pred ccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccc
Confidence 0000 0 0125666666666553221
Q ss_pred ---------CCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhh
Q psy4876 532 ---------AQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEI 594 (609)
Q Consensus 532 ---------~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~ 594 (609)
.-+.|.=+|+.+++.+-.........-.. +.-.+.+++.++.||.++.+|..+++..-+.+.
T Consensus 430 ~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 430 LTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred cccCCCCCCCceeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 12457778888887776654322111111 222556788888899999999999988765544
No 359
>KOG3617|consensus
Probab=97.51 E-value=0.0014 Score=72.32 Aligned_cols=230 Identities=15% Similarity=0.150 Sum_probs=131.1
Q ss_pred CCeEEEEEccCCCEEEEEeC----CCeEEEEeCCCCeeEEEecCCCCceEEEEecC--CEEEEEecCCeEEEEEcCCCCe
Q psy4876 336 ENVCSVAWIQEGYMLGVGTS----LGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT--YILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~----dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~--~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
+.-+-.+|+|...++|+++- .|.|.||- ++|+..+... ..-.+++++|++ -.|+.|-.-|.+.+|...+.+
T Consensus 16 avsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e- 92 (1416)
T KOG3617|consen 16 AVSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE- 92 (1416)
T ss_pred ccccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCce-
Confidence 33445689999999998763 57888884 4455433222 233466799985 577788889999999988763
Q ss_pred eEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccce--EeecCCcccEEEEEEcCCCCcE-----E
Q psy4876 410 KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPI--HSLSRHQAAVKAIAWCPWSPNV-----L 482 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~--~~~~~h~~~V~~l~~sp~~~~l-----l 482 (609)
.-.....|..+|..+.||++|..++++..-|.|.+|....-... ...++ +.+..| -...|...++++..+ .
T Consensus 93 ~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~-q~~~~~~hel~~~-ltl~cfRL~~~~Ee~~~laKa 170 (1416)
T KOG3617|consen 93 THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEI-QTSNIMQHELNDQ-LTLWCFRLSYDREEKFKLAKA 170 (1416)
T ss_pred eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeecccc-ccchhhhhHhhce-eeEEEEecCCChHHhhhhhhh
Confidence 44455679999999999999999999999999999987632110 01111 111111 123455556654322 1
Q ss_pred EEEeccCCCeEE-EEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEE
Q psy4876 483 ASGGGTADRHIY-FWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLA 561 (609)
Q Consensus 483 asggGs~Dg~I~-iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~ 561 (609)
++.| ++..+- .++.+....-.+.. + .=.|+|..++++. .+|+|+-.|- .+......+... . ..+-
T Consensus 171 aVtg--De~alD~~fnwk~~~a~rs~~-k------sgv~~g~~F~~~~--~~GtVyyvdq-~g~~~~V~k~dS-~-vQmL 236 (1416)
T KOG3617|consen 171 AVTG--DESALDEPFNWKESLAERSDE-K------SGVPKGTEFLFAG--KSGTVYYVDQ-NGRQRTVHKLDS-E-VQML 236 (1416)
T ss_pred hccC--chhhhcccccCccchhhcccc-c------cCCCCCcEEEEEc--CCceEEEEcC-CCcEEEEEEccc-h-HHHH
Confidence 2221 233222 33322111111111 1 1136677777753 7888887773 344333332211 1 2344
Q ss_pred EeCCCCEEEEEECCCCEEEEEcC
Q psy4876 562 MSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 562 ~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
|.+....|+..-.+-++.++-+.
T Consensus 237 f~~~~eai~~i~e~lr~~l~~v~ 259 (1416)
T KOG3617|consen 237 FMGYCEAISIIIEFLRDCLIFVL 259 (1416)
T ss_pred HhcccceEEEEeeeceeeEEEec
Confidence 55555555555555555554443
No 360
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.48 E-value=0.033 Score=57.86 Aligned_cols=138 Identities=14% Similarity=0.184 Sum_probs=91.8
Q ss_pred CeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCe
Q psy4876 289 GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK 368 (609)
Q Consensus 289 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~ 368 (609)
|.|+++++..... ...+++.+.+....+.|++++-- +| +|+++.. +.|.+|++...+
T Consensus 62 Gri~v~~i~~~~~--------------------~~~~l~~i~~~~~~g~V~ai~~~-~~-~lv~~~g-~~l~v~~l~~~~ 118 (321)
T PF03178_consen 62 GRILVFEISESPE--------------------NNFKLKLIHSTEVKGPVTAICSF-NG-RLVVAVG-NKLYVYDLDNSK 118 (321)
T ss_dssp EEEEEEEECSS-------------------------EEEEEEEEEESS-EEEEEEE-TT-EEEEEET-TEEEEEEEETTS
T ss_pred cEEEEEEEEcccc--------------------cceEEEEEEEEeecCcceEhhhh-CC-EEEEeec-CEEEEEEccCcc
Confidence 8899999887100 00245555555567899999877 33 4665554 789999998777
Q ss_pred -eEEEec-CCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q psy4876 369 -KCRTMD-GHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQ--NHTQEVCGLKWSPDGRYLASGGNDNLLNI 444 (609)
Q Consensus 369 -~~~~l~-~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~spdg~~lasgs~Dg~I~i 444 (609)
....-. .....+.++...+++++.|+....|.++.++.....+..+. .....++++.|-++++.++.+..+|.|.+
T Consensus 119 ~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~ 198 (321)
T PF03178_consen 119 TLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFV 198 (321)
T ss_dssp SEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEE
T ss_pred cchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEE
Confidence 433322 23447888888888999999888888876554333233222 23556888899877779999999999999
Q ss_pred EeCCC
Q psy4876 445 WSGVP 449 (609)
Q Consensus 445 wd~~~ 449 (609)
+....
T Consensus 199 l~~~~ 203 (321)
T PF03178_consen 199 LRYNP 203 (321)
T ss_dssp EEE-S
T ss_pred EEECC
Confidence 98763
No 361
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.46 E-value=0.058 Score=55.35 Aligned_cols=218 Identities=17% Similarity=0.141 Sum_probs=131.5
Q ss_pred EEEEccCCC-EEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-cC-CEEEEEecCCeEEEEEcCCCCeeEEEEc-
Q psy4876 340 SVAWIQEGY-MLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-NT-YILSSGSRCGNIVHHDVRSRDHKVALLQ- 415 (609)
Q Consensus 340 ~v~~spdg~-~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~-~~L~sgs~dg~I~iwd~~~~~~~~~~~~- 415 (609)
+..|.++.. ++.+--..+.|.-|+..+++. ..+. +...+.++.. +. ..|+++ ..| +.+++.+++.. +..+.
T Consensus 29 gP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~-~~~~-~p~~~~~~~~~d~~g~Lv~~-~~g-~~~~~~~~~~~-~t~~~~ 103 (307)
T COG3386 29 GPVWDPDRGALLWVDILGGRIHRLDPETGKK-RVFP-SPGGFSSGALIDAGGRLIAC-EHG-VRLLDPDTGGK-ITLLAE 103 (307)
T ss_pred CccCcCCCCEEEEEeCCCCeEEEecCCcCce-EEEE-CCCCcccceeecCCCeEEEE-ccc-cEEEeccCCce-eEEecc
Confidence 345777776 455556678899999876542 2222 2222333333 43 344443 333 55666654432 12221
Q ss_pred ---c-CCCCeEEEEEccCCCEEEEEeC-----------CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCc
Q psy4876 416 ---N-HTQEVCGLKWSPDGRYLASGGN-----------DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPN 480 (609)
Q Consensus 416 ---~-h~~~V~~l~~spdg~~lasgs~-----------Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 480 (609)
+ -....+.+...|+|.+.++... -|.|+.+|. .+ ..+..+..+-..-+.|+|+||++.
T Consensus 104 ~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g------~~~~l~~~~~~~~NGla~SpDg~t 176 (307)
T COG3386 104 PEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DG------GVVRLLDDDLTIPNGLAFSPDGKT 176 (307)
T ss_pred ccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CC------CEEEeecCcEEecCceEECCCCCE
Confidence 1 1134567888999986665433 134555554 23 344555555555688999999988
Q ss_pred EEEEEeccCCCeEEEEECCC--Cce---e-EE-Ec-CCCCeEEEEEcCCCCeEEEEEecCC-CeEEEEECCCCceEEEEe
Q psy4876 481 VLASGGGTADRHIYFWNVSS--GAC---L-DS-ID-TKSQVCALLWNSDYKELVSAHGFAQ-NQLIIWKYPSLVKVAELH 551 (609)
Q Consensus 481 llasggGs~Dg~I~iwd~~t--~~~---~-~~-~~-~~~~v~sl~~s~~g~~l~~~sG~~d-g~I~Iwd~~~~~~~~~l~ 551 (609)
++++- +..+.|+-|++.. +.. . .. +. ..+..-.++...+|.+.+++. .+ +.|.+|+.. ++++..+.
T Consensus 177 ly~aD--T~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~--~~g~~v~~~~pd-G~l~~~i~ 251 (307)
T COG3386 177 LYVAD--TPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAV--WGGGRVVRFNPD-GKLLGEIK 251 (307)
T ss_pred EEEEe--CCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecc--cCCceEEEECCC-CcEEEEEE
Confidence 87775 4678888888752 211 1 11 11 234566788888888886533 33 489999987 99999988
Q ss_pred CCCCCEEEEEEe-CCCCEEEEEEC
Q psy4876 552 GHSARVLNLAMS-PDETTVLSAGA 574 (609)
Q Consensus 552 ~h~~~V~~l~~s-pdg~~L~s~s~ 574 (609)
.....+++++|- ++.+.|+..+.
T Consensus 252 lP~~~~t~~~FgG~~~~~L~iTs~ 275 (307)
T COG3386 252 LPVKRPTNPAFGGPDLNTLYITSA 275 (307)
T ss_pred CCCCCCccceEeCCCcCEEEEEec
Confidence 887888999995 45565554444
No 362
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.39 E-value=0.088 Score=53.12 Aligned_cols=224 Identities=16% Similarity=0.137 Sum_probs=122.9
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC-eeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEEcCCCCeeEEE--------
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVSAK-KKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHDVRSRDHKVAL-------- 413 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~~~-~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd~~~~~~~~~~-------- 413 (609)
..++.|++|+.+| |.+++.... +...... ...|..+..- -+.|++-+ |+.+.++++..-......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 3578999999999 899998332 3333222 2237877773 34454443 499999998754322100
Q ss_pred -----EccCCCCeEEEE---EccCCCEEEEEeCCCcEEEEeCCCCCCCCCc-cceEeecCCcccEEEEEEcCCCCcEEEE
Q psy4876 414 -----LQNHTQEVCGLK---WSPDGRYLASGGNDNLLNIWSGVPGQHTFST-QPIHSLSRHQAAVKAIAWCPWSPNVLAS 484 (609)
Q Consensus 414 -----~~~h~~~V~~l~---~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~-~~~~~~~~h~~~V~~l~~sp~~~~llas 484 (609)
.......+...+ -...+..|+++. ...|.+|........ . .....+. -...+.+++|.. ..++.
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~--f~~~~ke~~-lp~~~~~i~~~~---~~i~v 153 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNS--FSKLLKEIS-LPDPPSSIAFLG---NKICV 153 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCccc--ccceeEEEE-cCCCcEEEEEeC---CEEEE
Confidence 111223344444 112333455544 468888887764211 1 2334443 346788999984 34555
Q ss_pred EeccCCCeEEEEECCCCceeEEEcCCC------------CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEE--EE
Q psy4876 485 GGGTADRHIYFWNVSSGACLDSIDTKS------------QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVA--EL 550 (609)
Q Consensus 485 ggGs~Dg~I~iwd~~t~~~~~~~~~~~------------~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~--~l 550 (609)
| ..+...+.|+.++.....+.... ....+.--+++.+|++ .++.-.+.|. .|+... .+
T Consensus 154 ~---~~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~----~~~~g~fv~~-~G~~~r~~~i 225 (275)
T PF00780_consen 154 G---TSKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLC----YDNIGVFVNK-NGEPSRKSTI 225 (275)
T ss_pred E---eCCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEE----ecceEEEEcC-CCCcCcccEE
Confidence 4 36778999999776654442211 1222222333444443 1333333343 343332 22
Q ss_pred eCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchh
Q psy4876 551 HGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 551 ~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
.- ...+..+++ ...+|+..+. +.|.||++.++...+.
T Consensus 226 ~W-~~~p~~~~~--~~pyli~~~~-~~iEV~~~~~~~lvQ~ 262 (275)
T PF00780_consen 226 QW-SSAPQSVAY--SSPYLIAFSS-NSIEVRSLETGELVQT 262 (275)
T ss_pred Ec-CCchhEEEE--ECCEEEEECC-CEEEEEECcCCcEEEE
Confidence 21 234556666 3557877766 4599999999976443
No 363
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.27 E-value=0.00079 Score=44.11 Aligned_cols=38 Identities=37% Similarity=0.634 Sum_probs=33.8
Q ss_pred ceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEE
Q psy4876 545 VKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWK 582 (609)
Q Consensus 545 ~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWd 582 (609)
..+..+..|...|.++.|++++.++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45566778899999999999999999999999999996
No 364
>KOG4499|consensus
Probab=97.26 E-value=0.059 Score=51.65 Aligned_cols=204 Identities=14% Similarity=0.147 Sum_probs=121.7
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEE-ecCCCCceEEEEe---c-CCEEEEEe-cCCeEEEEEcCCCCe-eEEEEc----
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRT-MDGHDVRVGALAW---N-TYILSSGS-RCGNIVHHDVRSRDH-KVALLQ---- 415 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~-l~~h~~~V~~l~~---~-~~~L~sgs-~dg~I~iwd~~~~~~-~~~~~~---- 415 (609)
+.++.+--..|.|.-||..+.+..+. +.+ ..+.++.+ + +..++++. ..-.|.-||...... ...++.
T Consensus 27 ~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~--p~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~ 104 (310)
T KOG4499|consen 27 QSLLYVDIEAGEVHRYDIEQNKVYRAKIEG--PPSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQP 104 (310)
T ss_pred ceEEEEEeccCceehhhhhhhheEEEEEec--CcceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCc
Confidence 35666666667888899987554432 332 22333333 2 23444433 333456677443211 111111
Q ss_pred -cCCCCeEEEEEccCCCEEEEEeC---------CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEE
Q psy4876 416 -NHTQEVCGLKWSPDGRYLASGGN---------DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASG 485 (609)
Q Consensus 416 -~h~~~V~~l~~spdg~~lasgs~---------Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasg 485 (609)
......+.-..+|+|++++-.-. .|.++.|-... .+..+...-.--..++|+.+.+.+..+-
T Consensus 105 d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h--------~v~~i~~~v~IsNgl~Wd~d~K~fY~iD 176 (310)
T KOG4499|consen 105 DRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGH--------QVELIWNCVGISNGLAWDSDAKKFYYID 176 (310)
T ss_pred hHHhcccccCccCCCCceeeeeeccccccccccccEEEEeccCC--------CceeeehhccCCccccccccCcEEEEEc
Confidence 01334566678999998543222 24566665432 2333333344457899998887777775
Q ss_pred eccCCCeEEEEE--CCCCcee-----EEEcC-----CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC
Q psy4876 486 GGTADRHIYFWN--VSSGACL-----DSIDT-----KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH 553 (609)
Q Consensus 486 gGs~Dg~I~iwd--~~t~~~~-----~~~~~-----~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h 553 (609)
+.+-.|.-|| ..+|... ..++. +-..-.++...+|++.+++ +..++|..+|..+|+.+.++.-.
T Consensus 177 --sln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~--~ng~~V~~~dp~tGK~L~eiklP 252 (310)
T KOG4499|consen 177 --SLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVAT--FNGGTVQKVDPTTGKILLEIKLP 252 (310)
T ss_pred --cCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEE--ecCcEEEEECCCCCcEEEEEEcC
Confidence 4778887787 5566432 22221 1123455667778777773 47899999999999999999988
Q ss_pred CCCEEEEEEeC
Q psy4876 554 SARVLNLAMSP 564 (609)
Q Consensus 554 ~~~V~~l~~sp 564 (609)
...|+++||--
T Consensus 253 t~qitsccFgG 263 (310)
T KOG4499|consen 253 TPQITSCCFGG 263 (310)
T ss_pred CCceEEEEecC
Confidence 99999999964
No 365
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.25 E-value=0.1 Score=53.59 Aligned_cols=187 Identities=19% Similarity=0.164 Sum_probs=106.3
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCC-----CceEEEEe--cCCEEEEEec-----------C
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHD-----VRVGALAW--NTYILSSGSR-----------C 396 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~-----~~V~~l~~--~~~~L~sgs~-----------d 396 (609)
.+.+.++.....+..|+++.. | +.+++.+++..+..+..-. .+...+.. +|.+.++... -
T Consensus 65 p~~~~~~~~~d~~g~Lv~~~~-g-~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~ 142 (307)
T COG3386 65 PGGFSSGALIDAGGRLIACEH-G-VRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPT 142 (307)
T ss_pred CCCcccceeecCCCeEEEEcc-c-cEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCc
Confidence 345556655555555554433 3 6777776655533332111 22222333 3444333222 1
Q ss_pred CeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-CcEEEEeCCC--CCCCCCccceEeecCCcccEEEEE
Q psy4876 397 GNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND-NLLNIWSGVP--GQHTFSTQPIHSLSRHQAAVKAIA 473 (609)
Q Consensus 397 g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~D-g~I~iwd~~~--~~~~~~~~~~~~~~~h~~~V~~l~ 473 (609)
|.|+.+|. . ...+..+..+-..-++|+||||++.|..+... +.|+-|++.. +.... ......+....+..-.++
T Consensus 143 G~lyr~~p-~-g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~-~~~~~~~~~~~G~PDG~~ 219 (307)
T COG3386 143 GSLYRVDP-D-GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGG-RRGFVDFDEEPGLPDGMA 219 (307)
T ss_pred ceEEEEcC-C-CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCC-cceEEEccCCCCCCCceE
Confidence 33444443 2 34556666666667899999999887777654 7888888763 21111 112223333445566777
Q ss_pred EcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC-CCeEEEEEc-CCCCeEEEEE
Q psy4876 474 WCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK-SQVCALLWN-SDYKELVSAH 529 (609)
Q Consensus 474 ~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~-~~v~sl~~s-~~g~~l~~~s 529 (609)
...+| ++.+++. ...+.|.+|+.. |+.+..+... ..+++++|- ++.+.|++++
T Consensus 220 vDadG-~lw~~a~-~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 220 VDADG-NLWVAAV-WGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred EeCCC-CEEEecc-cCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence 77777 4554432 122499999988 9999999877 688888885 4556666654
No 366
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.21 E-value=0.095 Score=52.09 Aligned_cols=160 Identities=14% Similarity=0.156 Sum_probs=107.4
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCC-CCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGH-DVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h-~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
...|.++.|+|+.+.|++......-.||=...|+.++++.-. -.....|.| ++.+.++--+++.+.++.+......+
T Consensus 85 ~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~ 164 (316)
T COG3204 85 TANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVI 164 (316)
T ss_pred cccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEE
Confidence 345999999999999998888888888877889999887632 233445666 45666666678888888776543211
Q ss_pred E------EEc--cC-CCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCC-------cccEEEEEEc
Q psy4876 412 A------LLQ--NH-TQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRH-------QAAVKAIAWC 475 (609)
Q Consensus 412 ~------~~~--~h-~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h-------~~~V~~l~~s 475 (609)
. .+. .+ ....-+++|.|....|..+=+-+-+.||......... .++....+ -..|.++.|+
T Consensus 165 ~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l---~~~~~~~~~~~~~~f~~DvSgl~~~ 241 (316)
T COG3204 165 SAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSL---SVHASLDPTADRDLFVLDVSGLEFN 241 (316)
T ss_pred eccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCccc---ccccccCcccccceEeeccccceec
Confidence 1 111 12 4567899999988888888877777777766432111 11111111 2357788899
Q ss_pred CCCCcEEEEEeccCCCeEEEEECC
Q psy4876 476 PWSPNVLASGGGTADRHIYFWNVS 499 (609)
Q Consensus 476 p~~~~llasggGs~Dg~I~iwd~~ 499 (609)
+....+++.+ .+++.+.-.|..
T Consensus 242 ~~~~~LLVLS--~ESr~l~Evd~~ 263 (316)
T COG3204 242 AITNSLLVLS--DESRRLLEVDLS 263 (316)
T ss_pred CCCCcEEEEe--cCCceEEEEecC
Confidence 8877888876 377777777764
No 367
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.11 E-value=0.56 Score=50.46 Aligned_cols=260 Identities=15% Similarity=0.076 Sum_probs=134.6
Q ss_pred cccccCCccCCce---eEEEEEecCCC-eEEE--EcCC----eEEEEeCCCCCCCceEEecCCcccccccccccccccee
Q psy4876 258 DRILDAPEIQNDY---YLNLIDWSHFN-VLAV--ALGG----SIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAID 327 (609)
Q Consensus 258 ~~il~ap~~~~~~---~v~~l~wsp~~-lla~--s~dg----~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (609)
+.+||.-.+..+. .+..+.+||++ .+|. +.+| .|+++|+++ +...
T Consensus 109 evllD~n~l~~~~~~~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~t-------------------------g~~l 163 (414)
T PF02897_consen 109 EVLLDPNELAKDGGYVSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLET-------------------------GKFL 163 (414)
T ss_dssp EEEEEGGGGSTTSS-EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTT-------------------------TEEE
T ss_pred EEEEcchHhhccCceEEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCC-------------------------CcCc
Confidence 5566655554444 34468899987 5553 3444 599999998 5332
Q ss_pred eeeeecCCCCeEEEEEccCCCEEEEEeCCC-----------eEEEEeCCCCee--EEEecCCCCc--eEEEEe--cCCEE
Q psy4876 328 HLMDLEGNENVCSVAWIQEGYMLGVGTSLG-----------TVQLWDVSAKKK--CRTMDGHDVR--VGALAW--NTYIL 390 (609)
Q Consensus 328 ~l~~~~h~~~V~~v~~spdg~~Lasgs~dg-----------~I~iwd~~~~~~--~~~l~~h~~~--V~~l~~--~~~~L 390 (609)
.- .+. ......+.|.++++.|+....+. .|..|.+.+... ...+...... ...+.. ++++|
T Consensus 164 ~d-~i~-~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l 241 (414)
T PF02897_consen 164 PD-GIE-NPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYL 241 (414)
T ss_dssp EE-EEE-EEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEE
T ss_pred CC-ccc-ccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEE
Confidence 11 111 11223499999987766554332 378888876532 2444443333 344555 56766
Q ss_pred EEEecC----CeEEEEEcCCC---CeeEEEEccCCCCeEEEEEccCCCEEEEEeC---CCcEEEEeCCCCCCCCCccceE
Q psy4876 391 SSGSRC----GNIVHHDVRSR---DHKVALLQNHTQEVCGLKWSPDGRYLASGGN---DNLLNIWSGVPGQHTFSTQPIH 460 (609)
Q Consensus 391 ~sgs~d----g~I~iwd~~~~---~~~~~~~~~h~~~V~~l~~spdg~~lasgs~---Dg~I~iwd~~~~~~~~~~~~~~ 460 (609)
+..... ..+.+.|+... ......+......+....-+..+.+++.... .+.|...++...... ....
T Consensus 242 ~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~---~~~~ 318 (414)
T PF02897_consen 242 FISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPA---EWWT 318 (414)
T ss_dssp EEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGG---GEEE
T ss_pred EEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccc---ccee
Confidence 654332 34778888764 2233444434434433333334434433322 356777787766310 1122
Q ss_pred eecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC--CCeEEEEEcCCCCeEEEEEec--CCCeE
Q psy4876 461 SLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK--SQVCALLWNSDYKELVSAHGF--AQNQL 536 (609)
Q Consensus 461 ~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~--~~v~sl~~s~~g~~l~~~sG~--~dg~I 536 (609)
.+..+...+.-..+...+..|++..--.....|+++|+..+.....+... +.|..+...+++..+.....+ .-+++
T Consensus 319 ~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~ 398 (414)
T PF02897_consen 319 VLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTV 398 (414)
T ss_dssp EEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEE
T ss_pred EEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEE
Confidence 44445553333333344556776653122356889999844555444433 345666666666666543221 24567
Q ss_pred EEEECCCCceE
Q psy4876 537 IIWKYPSLVKV 547 (609)
Q Consensus 537 ~Iwd~~~~~~~ 547 (609)
+.||+.+++..
T Consensus 399 y~~d~~t~~~~ 409 (414)
T PF02897_consen 399 YRYDLATGELT 409 (414)
T ss_dssp EEEETTTTCEE
T ss_pred EEEECCCCCEE
Confidence 78888777643
No 368
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.11 E-value=0.042 Score=46.79 Aligned_cols=99 Identities=13% Similarity=0.169 Sum_probs=68.6
Q ss_pred eEEEEEcc---CC-CEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 338 VCSVAWIQ---EG-YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 338 V~~v~~sp---dg-~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
|++|++.. +| +.|++|+.|..|+||+-. ..+..+..+ ..|.++.- .+..|+.+..+|+|-+|+-.. .+.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~-~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~---RlW 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITET-DKVTSLCSLGGGRFAYALANGTVGVYDRSQ---RLW 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecc-cceEEEEEcCCCEEEEEecCCEEEEEeCcc---eee
Confidence 56666654 44 789999999999999854 667777644 45555555 678899999999999998754 344
Q ss_pred EEccCCCCeEEEEEcc-C--CC-EEEEEeCCCcEE
Q psy4876 413 LLQNHTQEVCGLKWSP-D--GR-YLASGGNDNLLN 443 (609)
Q Consensus 413 ~~~~h~~~V~~l~~sp-d--g~-~lasgs~Dg~I~ 443 (609)
..+.. ..+.++++.. + |. .|++|-.+|.|-
T Consensus 76 RiKSK-~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 76 RIKSK-NQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eeccC-CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 44433 3366666544 3 22 588888888764
No 369
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=97.10 E-value=0.35 Score=48.06 Aligned_cols=269 Identities=12% Similarity=0.025 Sum_probs=145.1
Q ss_pred EEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEE
Q psy4876 274 LIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVG 353 (609)
Q Consensus 274 ~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasg 353 (609)
.+.++.+....+..+..++|.|+.+. .+..++-.+...+.-.++..+ |++..++
T Consensus 91 Dv~vse~yvyvad~ssGL~IvDIS~P------------------------~sP~~~~~lnt~gyaygv~vs--Gn~aYVa 144 (370)
T COG5276 91 DVRVSEEYVYVADWSSGLRIVDISTP------------------------DSPTLIGFLNTDGYAYGVYVS--GNYAYVA 144 (370)
T ss_pred eeEecccEEEEEcCCCceEEEeccCC------------------------CCcceeccccCCceEEEEEec--CCEEEEe
Confidence 35555555555666778999999883 233334344334555566554 7888888
Q ss_pred eCCCeEEEEeCCCC---eeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEc-cCCCCeEEEEEccC
Q psy4876 354 TSLGTVQLWDVSAK---KKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQ-NHTQEVCGLKWSPD 429 (609)
Q Consensus 354 s~dg~I~iwd~~~~---~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~spd 429 (609)
..|.-+.+.|+.+. .+...+.........++.+|++-..+..|+-+.+.|+.....++..-. .....+.++..+++
T Consensus 145 dlddgfLivdvsdpssP~lagrya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdn 224 (370)
T COG5276 145 DLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDN 224 (370)
T ss_pred eccCcEEEEECCCCCCceeeeeeccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCC
Confidence 86655778888654 444555555555677888899999999999999999987654433222 22336888888877
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCccc--EEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc---ee
Q psy4876 430 GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA--VKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA---CL 504 (609)
Q Consensus 430 g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~--V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~---~~ 504 (609)
..+++...+ -+.+-|....... ..+... ....+ ++.+..+ ++...+.- .+.-+.+-|+.+.. ..
T Consensus 225 r~y~vvy~e--gvlivd~s~~ssp---~~~gsy-et~~p~~~s~v~Vs--~~~~Yvad---ga~gl~~idisnp~spfl~ 293 (370)
T COG5276 225 RAYLVVYDE--GVLIVDVSGPSSP---TVFGSY-ETSNPVSISTVPVS--GEYAYVAD---GAKGLPIIDISNPPSPFLS 293 (370)
T ss_pred eeEEEEccc--ceEEEecCCCCCc---eEeecc-ccCCcccccceecc--cceeeeec---cccCceeEeccCCCCCchh
Confidence 766666543 4777787765321 111111 12222 2222222 22333322 24445555554321 11
Q ss_pred EEEcCCC-CeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEc
Q psy4876 505 DSIDTKS-QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583 (609)
Q Consensus 505 ~~~~~~~-~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl 583 (609)
..+.+.+ +...+..+.. ++..+ ..+...+.+....+......+-...+.+.+.+-+.+.+.+...++-+.||+.
T Consensus 294 ss~~t~g~~a~gi~ay~~--y~yia---dkn~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~ 368 (370)
T COG5276 294 SSLDTAGYQAAGIRAYGN--YNYIA---DKNTGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEY 368 (370)
T ss_pred ccccCCCccccceEEecC--eeEec---cCCceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEEe
Confidence 2222222 2222222222 22221 1123333333222222222222223444455556678889999999999986
Q ss_pred C
Q psy4876 584 F 584 (609)
Q Consensus 584 ~ 584 (609)
.
T Consensus 369 ~ 369 (370)
T COG5276 369 L 369 (370)
T ss_pred c
Confidence 3
No 370
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.06 E-value=0.48 Score=50.51 Aligned_cols=88 Identities=13% Similarity=0.140 Sum_probs=58.2
Q ss_pred eecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCC--CeEEEEEcC----------------CC
Q psy4876 461 SLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS--QVCALLWNS----------------DY 522 (609)
Q Consensus 461 ~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~--~v~sl~~s~----------------~g 522 (609)
.+.+....+.+++.+|++ .++++. ..-|.|.++|+.++..++.+++-. ++.-+.... ..
T Consensus 302 ~l~D~~R~~~~i~~sP~~-~laA~t--DslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~ 378 (415)
T PF14655_consen 302 GLPDSKREGESICLSPSG-RLAAVT--DSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRF 378 (415)
T ss_pred eeccCCceEEEEEECCCC-CEEEEE--cCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcc
Confidence 344455568899999996 466654 367999999999998887776532 221111111 11
Q ss_pred CeEEEEEecCCCeEEEEECCCCceEEEEe
Q psy4876 523 KELVSAHGFAQNQLIIWKYPSLVKVAELH 551 (609)
Q Consensus 523 ~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~ 551 (609)
..+++...-..|.|.||.++++..+..+.
T Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 379 ALFLVIYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred eEEEEEEeccCCeEEEEecCCCCEEEEEE
Confidence 23444445578999999999888877664
No 371
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.05 E-value=0.026 Score=63.27 Aligned_cols=152 Identities=14% Similarity=0.120 Sum_probs=93.3
Q ss_pred CCeEEEEEccCCCEEEEEe------CCC--cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEec---
Q psy4876 419 QEVCGLKWSPDGRYLASGG------NDN--LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGG--- 487 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs------~Dg--~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggG--- 487 (609)
..+.+.+++|||+.+|... .|. .|++++.... ......+. ....-.|+|+|..+.+...+
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~-------~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~ 420 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV-------AVQVLEGH--SLTRPSWSLDADAVWVVVDGNTV 420 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc-------ceeeecCC--CCCCceECCCCCceEEEecCcce
Confidence 4678899999999887765 243 4556564221 21112222 37788999998766655311
Q ss_pred ------cCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEE---EECCCCc-eE---EEEe-CC
Q psy4876 488 ------TADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLII---WKYPSLV-KV---AELH-GH 553 (609)
Q Consensus 488 ------s~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~I---wd~~~~~-~~---~~l~-~h 553 (609)
...+.+.+.++..+.... .....|..+.|+|||..++... +++|+| -....+. .+ ..+. +-
T Consensus 421 ~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~---~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l 495 (591)
T PRK13616 421 VRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII---GGKVYLAVVEQTEDGQYALTNPREVGPGL 495 (591)
T ss_pred EEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE---CCEEEEEEEEeCCCCceeecccEEeeccc
Confidence 123445555555544433 3355799999999999999876 478877 4544554 11 1122 23
Q ss_pred CCCEEEEEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 554 SARVLNLAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 554 ~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
...+.++.|..++.++ ++..++...+|.+.-
T Consensus 496 ~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~v 526 (591)
T PRK13616 496 GDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNL 526 (591)
T ss_pred CCccccceEecCCEEE-EEecCCCCceEEEec
Confidence 3446889999999855 555555555666543
No 372
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.02 E-value=0.82 Score=50.85 Aligned_cols=61 Identities=5% Similarity=0.019 Sum_probs=41.8
Q ss_pred CeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC
Q psy4876 491 RHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH 553 (609)
Q Consensus 491 g~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h 553 (609)
+.|.-+|+.+|+.+-..........-...-.+..+++ +..+|.++.+|..+++.+..++-.
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~--g~~~G~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFY--GTLEGYFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEE--ECCCCeEEEEECCCCCEeEEEeCC
Confidence 5688889999988877664432211112224445555 557999999999999999888654
No 373
>KOG4640|consensus
Probab=96.98 E-value=0.0034 Score=67.59 Aligned_cols=93 Identities=19% Similarity=0.326 Sum_probs=76.7
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceE-EEEe--cCCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVG-ALAW--NTYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~-~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
...|.-+.|+|.-..+|.+..+|.|.+..+. .+.+.++.-|...++ +++| +|+.|+.|-.||+|+++|+.++....
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 3567889999999999999999999999988 678888887777777 9999 69999999999999999999985443
Q ss_pred EEEccCCCCeEEEEEcc
Q psy4876 412 ALLQNHTQEVCGLKWSP 428 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~sp 428 (609)
.....-...|.++-|.+
T Consensus 99 ~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 99 SFLFSVETDISKGIWDR 115 (665)
T ss_pred ccccccccchheeeccc
Confidence 33334456677777763
No 374
>PHA02713 hypothetical protein; Provisional
Probab=96.93 E-value=0.057 Score=60.48 Aligned_cols=217 Identities=7% Similarity=0.131 Sum_probs=106.8
Q ss_pred eEEEEeCCCCeeEE--EecCCCCceEEEEecCCEEEEEecC------CeEEEEEcCCCCe-eEEEEccCCCCeEEEEEcc
Q psy4876 358 TVQLWDVSAKKKCR--TMDGHDVRVGALAWNTYILSSGSRC------GNIVHHDVRSRDH-KVALLQNHTQEVCGLKWSP 428 (609)
Q Consensus 358 ~I~iwd~~~~~~~~--~l~~h~~~V~~l~~~~~~L~sgs~d------g~I~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp 428 (609)
.+..||..+++-.. .+.........+..++.+++.|+.+ ..+..||..+..- .+..+....... +++ .-
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~-~~ 350 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLA-VI 350 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEE-EE
Confidence 57788887764322 2222222233444578888888854 3477888776521 111111111111 222 23
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC--------------
Q psy4876 429 DGRYLASGGNDN-----LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA-------------- 489 (609)
Q Consensus 429 dg~~lasgs~Dg-----~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~-------------- 489 (609)
+|.+.+.||.++ .|..||..+... ..+..+.........++. +..+++.||.+.
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W----~~~~~mp~~r~~~~~~~~---~g~IYviGG~~~~~~~~~~~~~~~~~ 423 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKW----KMLPDMPIALSSYGMCVL---DQYIYIIGGRTEHIDYTSVHHMNSID 423 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeE----EECCCCCcccccccEEEE---CCEEEEEeCCCccccccccccccccc
Confidence 677888888754 488899876521 111122111111122222 346777775211
Q ss_pred -------CCeEEEEECCCCcee--EEEcCCCCeEEEEEcCCCCeEEEEEecCC-----CeEEEEECCC---CceEEEEeC
Q psy4876 490 -------DRHIYFWNVSSGACL--DSIDTKSQVCALLWNSDYKELVSAHGFAQ-----NQLIIWKYPS---LVKVAELHG 552 (609)
Q Consensus 490 -------Dg~I~iwd~~t~~~~--~~~~~~~~v~sl~~s~~g~~l~~~sG~~d-----g~I~Iwd~~~---~~~~~~l~~ 552 (609)
-..+..||..+.+-. ..+... ....-+..-++ .|++.+|..+ ..+..||..+ ++.+..+..
T Consensus 424 ~~~~~~~~~~ve~YDP~td~W~~v~~m~~~-r~~~~~~~~~~-~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~ 501 (557)
T PHA02713 424 MEEDTHSSNKVIRYDTVNNIWETLPNFWTG-TIRPGVVSHKD-DIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTES 501 (557)
T ss_pred ccccccccceEEEECCCCCeEeecCCCCcc-cccCcEEEECC-EEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCc
Confidence 135777887765432 111111 11111112233 3444434322 3467888775 344444433
Q ss_pred CCCCEEEEEEeCCCCEEEEEECCC--CEEEEEcCCCc
Q psy4876 553 HSARVLNLAMSPDETTVLSAGADE--TLRLWKIFEKV 587 (609)
Q Consensus 553 h~~~V~~l~~spdg~~L~s~s~Dg--~I~iWdl~~~~ 587 (609)
.......+.+ +|++.++||.|+ ++..||..+.+
T Consensus 502 ~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 502 RLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYE 536 (557)
T ss_pred ccccceeEEE--CCEEEEEeeecceeehhhcCccccc
Confidence 3333333333 788889999888 66667766544
No 375
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.89 E-value=0.0029 Score=41.22 Aligned_cols=37 Identities=38% Similarity=0.787 Sum_probs=33.0
Q ss_pred eEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEe
Q psy4876 410 KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWS 446 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd 446 (609)
....+..|...|.++.|++++.++++++.|+.|++||
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 4556677889999999999999999999999999996
No 376
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.87 E-value=0.068 Score=45.51 Aligned_cols=93 Identities=17% Similarity=0.244 Sum_probs=65.2
Q ss_pred EEecCCC---eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEE
Q psy4876 275 IDWSHFN---VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLG 351 (609)
Q Consensus 275 l~wsp~~---lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~La 351 (609)
++|..++ +++++.|..|++|+-+. .+.++...+.|++++-... ..++
T Consensus 8 ~d~d~dg~~eLlvGs~D~~IRvf~~~e-----------------------------~~~Ei~e~~~v~~L~~~~~-~~F~ 57 (111)
T PF14783_consen 8 FDFDGDGENELLVGSDDFEIRVFKGDE-----------------------------IVAEITETDKVTSLCSLGG-GRFA 57 (111)
T ss_pred EecCCCCcceEEEecCCcEEEEEeCCc-----------------------------EEEEEecccceEEEEEcCC-CEEE
Confidence 4455553 99999999999998544 5556666788888888766 5688
Q ss_pred EEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-c----C-CEEEEEecCCeEE
Q psy4876 352 VGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-N----T-YILSSGSRCGNIV 400 (609)
Q Consensus 352 sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~----~-~~L~sgs~dg~I~ 400 (609)
.+..+|+|-+|+-. ..+...+. ...+.++.+ + | .-|++|-.+|.|-
T Consensus 58 Y~l~NGTVGvY~~~--~RlWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 58 YALANGTVGVYDRS--QRLWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred EEecCCEEEEEeCc--ceeeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 89999999999853 33333332 233666665 3 2 4788998888774
No 377
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.83 E-value=0.36 Score=47.81 Aligned_cols=114 Identities=18% Similarity=0.316 Sum_probs=71.6
Q ss_pred CEEEEEecCCe-EEEEEcCCCCeeEEEEccCC-CCeEEEEEccCCCEEEEEeCC-----CcEEEEeCCCCCCCCCccceE
Q psy4876 388 YILSSGSRCGN-IVHHDVRSRDHKVALLQNHT-QEVCGLKWSPDGRYLASGGND-----NLLNIWSGVPGQHTFSTQPIH 460 (609)
Q Consensus 388 ~~L~sgs~dg~-I~iwd~~~~~~~~~~~~~h~-~~V~~l~~spdg~~lasgs~D-----g~I~iwd~~~~~~~~~~~~~~ 460 (609)
.-++.+-+-|+ ..++|....+.++....... .-.-.-+|||||.+|...-+| |.|-|||.+.+ .+.+.
T Consensus 81 ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~-----fqrvg 155 (366)
T COG3490 81 RAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG-----FQRVG 155 (366)
T ss_pred ceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc-----cceec
Confidence 44444444454 45778777653332211111 111123799999999876554 78999999865 36777
Q ss_pred eecCCcccEEEEEEcCCCCcEEEEEec---------------cCCCeEEEEECCCCceeEE
Q psy4876 461 SLSRHQAAVKAIAWCPWSPNVLASGGG---------------TADRHIYFWNVSSGACLDS 506 (609)
Q Consensus 461 ~~~~h~~~V~~l~~sp~~~~llasggG---------------s~Dg~I~iwd~~t~~~~~~ 506 (609)
.+..|.-.-..+.|.+||..+++..|| +..-.+.+.|..+|+.+..
T Consensus 156 E~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liek 216 (366)
T COG3490 156 EFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEK 216 (366)
T ss_pred ccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhh
Confidence 888888888899999999877666542 1123456667666665433
No 378
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.82 E-value=0.033 Score=63.51 Aligned_cols=139 Identities=11% Similarity=0.068 Sum_probs=90.7
Q ss_pred ecCCeEEEEEcCCCCeeEEEEccCCCC-eEEEEEcc-----CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcc
Q psy4876 394 SRCGNIVHHDVRSRDHKVALLQNHTQE-VCGLKWSP-----DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQA 467 (609)
Q Consensus 394 s~dg~I~iwd~~~~~~~~~~~~~h~~~-V~~l~~sp-----dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~ 467 (609)
.....|+-.|+..+ ..+..+..|... |..++-.. .....+.|-.++.|..||.+-..........+.+ ....
T Consensus 501 ~~~~~ly~mDLe~G-KVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y-~~~~ 578 (794)
T PF08553_consen 501 NNPNKLYKMDLERG-KVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQY-SSKN 578 (794)
T ss_pred CCCCceEEEecCCC-cEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccccc-ccCC
Confidence 35577888999987 577777776644 55443221 1334567778899999999864210000011122 2344
Q ss_pred cEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 468 AVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 468 ~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
...|++-..+| .+|+| +.+|.||+||--.......+.+ +.+|..|..+.||+++++.| +..|.+++.
T Consensus 579 ~Fs~~aTt~~G--~iavg--s~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc---~tyLlLi~t 646 (794)
T PF08553_consen 579 NFSCFATTEDG--YIAVG--SNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC---KTYLLLIDT 646 (794)
T ss_pred CceEEEecCCc--eEEEE--eCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee---cceEEEEEE
Confidence 57788877766 45565 5899999999432222223333 57999999999999999876 777888775
No 379
>KOG4640|consensus
Probab=96.80 E-value=0.0058 Score=65.85 Aligned_cols=93 Identities=20% Similarity=0.362 Sum_probs=76.8
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEE-EEEEcCCCCcEEEEEeccCCCeEEEE
Q psy4876 418 TQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVK-AIAWCPWSPNVLASGGGTADRHIYFW 496 (609)
Q Consensus 418 ~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~-~l~~sp~~~~llasggGs~Dg~I~iw 496 (609)
...|.-+.|+|.-.++|.+..+|.|.+..+. . +.+.++..|...++ +++|.||| .++|.| -.||+|++.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~------qRlwtip~p~~~v~~sL~W~~DG-kllaVg--~kdG~I~L~ 89 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-W------QRLWTIPIPGENVTASLCWRPDG-KLLAVG--FKDGTIRLH 89 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-c------ceeEeccCCCCccceeeeecCCC-CEEEEE--ecCCeEEEE
Confidence 3467789999999999999999999988877 3 56777776777776 99999997 688887 489999999
Q ss_pred ECCCCceeEE--EcCCCCeEEEEEcC
Q psy4876 497 NVSSGACLDS--IDTKSQVCALLWNS 520 (609)
Q Consensus 497 d~~t~~~~~~--~~~~~~v~sl~~s~ 520 (609)
|+.++..+.. +.....|.++.|.+
T Consensus 90 Dve~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 90 DVEKGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred EccCCCceeccccccccchheeeccc
Confidence 9999998888 45556788888863
No 380
>KOG4441|consensus
Probab=96.78 E-value=0.096 Score=58.67 Aligned_cols=206 Identities=13% Similarity=0.129 Sum_probs=111.4
Q ss_pred cceeeeeeecCCCCeEEEEEccCCCEEEEEeCC-C-----eEEEEeCCCCee--EEEecCCCCceEEEEecCCEEEEEec
Q psy4876 324 RAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSL-G-----TVQLWDVSAKKK--CRTMDGHDVRVGALAWNTYILSSGSR 395 (609)
Q Consensus 324 ~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~d-g-----~I~iwd~~~~~~--~~~l~~h~~~V~~l~~~~~~L~sgs~ 395 (609)
+....+..+.....-.+++.. ++...++|+.| | .+..||..+++- +..+............+|.+.++|+.
T Consensus 311 ~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~ 389 (571)
T KOG4441|consen 311 NEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGF 389 (571)
T ss_pred CcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEecc
Confidence 556666666544444455554 45677778888 3 577888877652 23344444555666678999999999
Q ss_pred CCe-----EEEEEcCCCCeeEEEEccCCCCeEEEEE-ccCCCEEEEEeCCC------cEEEEeCCCCCCCCCccceEeec
Q psy4876 396 CGN-----IVHHDVRSRDHKVALLQNHTQEVCGLKW-SPDGRYLASGGNDN------LLNIWSGVPGQHTFSTQPIHSLS 463 (609)
Q Consensus 396 dg~-----I~iwd~~~~~~~~~~~~~h~~~V~~l~~-spdg~~lasgs~Dg------~I~iwd~~~~~~~~~~~~~~~~~ 463 (609)
||. |-.||..+.. -...........+... .-+|.+.++||.|+ .|..||..+... ..+..+.
T Consensus 390 dg~~~l~svE~YDp~~~~--W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W----~~~~~M~ 463 (571)
T KOG4441|consen 390 DGEKSLNSVECYDPVTNK--WTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTW----TLIAPMN 463 (571)
T ss_pred ccccccccEEEecCCCCc--ccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCce----eecCCcc
Confidence 975 6778877653 1111112112222222 22688888888654 578888887632 2222222
Q ss_pred CCcccEEEEEEcCCCCcEEEEEeccCCC-----eEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCC----
Q psy4876 464 RHQAAVKAIAWCPWSPNVLASGGGTADR-----HIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQN---- 534 (609)
Q Consensus 464 ~h~~~V~~l~~sp~~~~llasggGs~Dg-----~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg---- 534 (609)
..........+ +..|++.|| .|+ +|..||..+.+-...-........+.....+..+++..| .+|
T Consensus 464 ~~R~~~g~a~~---~~~iYvvGG--~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~~~~ly~vGG-~~~~~~l 537 (571)
T KOG4441|consen 464 TRRSGFGVAVL---NGKIYVVGG--FDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVLGGKLYAVGG-FDGNNNL 537 (571)
T ss_pred cccccceEEEE---CCEEEEECC--ccCCCccceEEEEcCCCCceeEcccCccccccccEEEECCEEEEEec-ccCcccc
Confidence 22222222222 346888875 333 477788877654433222223333333334445555434 333
Q ss_pred -eEEEEECC
Q psy4876 535 -QLIIWKYP 542 (609)
Q Consensus 535 -~I~Iwd~~ 542 (609)
+|..||..
T Consensus 538 ~~ve~ydp~ 546 (571)
T KOG4441|consen 538 NTVECYDPE 546 (571)
T ss_pred ceeEEcCCC
Confidence 35555543
No 381
>KOG4441|consensus
Probab=96.76 E-value=0.12 Score=57.86 Aligned_cols=230 Identities=14% Similarity=0.170 Sum_probs=120.5
Q ss_pred CCCEEEEEeCCC------eEEEEeCCCCee--EEEecCCCCceEEEEecCCEEEEEecC-C-----eEEEEEcCCCCeeE
Q psy4876 346 EGYMLGVGTSLG------TVQLWDVSAKKK--CRTMDGHDVRVGALAWNTYILSSGSRC-G-----NIVHHDVRSRDHKV 411 (609)
Q Consensus 346 dg~~Lasgs~dg------~I~iwd~~~~~~--~~~l~~h~~~V~~l~~~~~~L~sgs~d-g-----~I~iwd~~~~~~~~ 411 (609)
.+..+++|+.++ .+..||..++.- ...+......+.....++.+.++|+.| | ++..||.++.. -
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~--W 361 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQ--W 361 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCc--e
Confidence 456777777763 578899887633 233333334445555588899999998 3 46778887653 1
Q ss_pred EEEccCCCCeEEEEEc-cCCCEEEEEeCCC-----cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEE
Q psy4876 412 ALLQNHTQEVCGLKWS-PDGRYLASGGNDN-----LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASG 485 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~s-pdg~~lasgs~Dg-----~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasg 485 (609)
.....-...-..+... -+|.+.|+||.|| .|-.||..+.+- ..+..+.. .........-+..+.++|
T Consensus 362 ~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W----~~va~m~~---~r~~~gv~~~~g~iYi~G 434 (571)
T KOG4441|consen 362 TPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKW----TPVAPMLT---RRSGHGVAVLGGKLYIIG 434 (571)
T ss_pred eccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcc----cccCCCCc---ceeeeEEEEECCEEEEEc
Confidence 1111111111111111 2688889999886 477888876532 22222221 223333333355788887
Q ss_pred eccCC----CeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCC----CeEEEEECCCCce--EEEEeCCCC
Q psy4876 486 GGTAD----RHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQ----NQLIIWKYPSLVK--VAELHGHSA 555 (609)
Q Consensus 486 gGs~D----g~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~d----g~I~Iwd~~~~~~--~~~l~~h~~ 555 (609)
|.+.. ..+..||..+++-...-.....-......--+..|++++|+++ .+|..||..+.+- +..+.....
T Consensus 435 G~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs 514 (571)
T KOG4441|consen 435 GGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRS 514 (571)
T ss_pred CcCCCccccceEEEEcCCCCceeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccc
Confidence 63222 4578888887654332221111111111122344555544332 2377788765433 322222223
Q ss_pred CEEEEEEeCCCCEEEEEECCC-----CEEEEEcCCC
Q psy4876 556 RVLNLAMSPDETTVLSAGADE-----TLRLWKIFEK 586 (609)
Q Consensus 556 ~V~~l~~spdg~~L~s~s~Dg-----~I~iWdl~~~ 586 (609)
.+..+.+ ++...+.|+.|| +|..||..+.
T Consensus 515 ~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d 548 (571)
T KOG4441|consen 515 AVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPETD 548 (571)
T ss_pred cccEEEE--CCEEEEEecccCccccceeEEcCCCCC
Confidence 3322333 677778888876 4556655443
No 382
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.69 E-value=0.23 Score=55.76 Aligned_cols=180 Identities=14% Similarity=0.121 Sum_probs=98.7
Q ss_pred ceEEEEe--cCCEEEEEe------cCC--eEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC---------
Q psy4876 379 RVGALAW--NTYILSSGS------RCG--NIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND--------- 439 (609)
Q Consensus 379 ~V~~l~~--~~~~L~sgs------~dg--~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~D--------- 439 (609)
.+...+. ++..++..- .|. .|.+++... .......+. ....-.|+|||..|++....
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg--~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG--VAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC--cceeeecCC--CCCCceECCCCCceEEEecCcceEEEecc
Confidence 4555555 566655544 233 455556532 222223332 37888999998887776533
Q ss_pred ---CcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEE---EECCCCce-e---EEEcC
Q psy4876 440 ---NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYF---WNVSSGAC-L---DSIDT 509 (609)
Q Consensus 440 ---g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~i---wd~~t~~~-~---~~~~~ 509 (609)
+.+++.+++.+ .... ...+.|..+.|+|||..+++.. ++.|++ -....|.. + ..+..
T Consensus 427 ~~~gql~~~~vd~g------e~~~---~~~g~Issl~wSpDG~RiA~i~----~g~v~Va~Vvr~~~G~~~l~~~~~l~~ 493 (591)
T PRK13616 427 PATGQLARTPVDAS------AVAS---RVPGPISELQLSRDGVRAAMII----GGKVYLAVVEQTEDGQYALTNPREVGP 493 (591)
T ss_pred CCCceEEEEeccCc------hhhh---ccCCCcCeEEECCCCCEEEEEE----CCEEEEEEEEeCCCCceeecccEEeec
Confidence 23333344333 1111 2345799999999999888875 467777 45445541 1 11222
Q ss_pred --CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC--CCCCEEEEEEeCCCCEEEEEECCCCEE
Q psy4876 510 --KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG--HSARVLNLAMSPDETTVLSAGADETLR 579 (609)
Q Consensus 510 --~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~--h~~~V~~l~~spdg~~L~s~s~Dg~I~ 579 (609)
...+.++.|..++.+++. ....+..+...++.... ...+.+ ....+..|+=+++ .|+....++.+.
T Consensus 494 ~l~~~~~~l~W~~~~~L~V~-~~~~~~~v~~v~vDG~~-~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~~~ 563 (591)
T PRK13616 494 GLGDTAVSLDWRTGDSLVVG-RSDPEHPVWYVNLDGSN-SDALPSRNLSAPVVAVAASPS--TVYVTDARAVLQ 563 (591)
T ss_pred ccCCccccceEecCCEEEEE-ecCCCCceEEEecCCcc-ccccCCCCccCceEEEecCCc--eEEEEcCCceEE
Confidence 224688999999996543 32233334444443222 112222 2566777777763 455666666443
No 383
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=96.67 E-value=1.2 Score=47.61 Aligned_cols=273 Identities=11% Similarity=0.149 Sum_probs=147.9
Q ss_pred CeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEcc-----CCCEEEEEeC
Q psy4876 281 NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQ-----EGYMLGVGTS 355 (609)
Q Consensus 281 ~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~sp-----dg~~Lasgs~ 355 (609)
.++.|+..|.++||+...... .....+.+.+-..+|..|+.-. +...||+-.
T Consensus 39 ~IivGS~~G~LrIy~P~~~~~----------------------~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLh- 95 (418)
T PF14727_consen 39 KIIVGSYSGILRIYDPSGNEF----------------------QPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLH- 95 (418)
T ss_pred EEEEeccccEEEEEccCCCCC----------------------CCccEEEEEecCCcEEEEEeccccCCCCcceEEEec-
Confidence 388899999999999865211 1113444545567888877643 235666543
Q ss_pred CCeEEEEeCCC--Ce-------eEEEecCCCCc--eEEE---Ee---c-CCEEEEEecCCeEEEEEcCCCCeeEEEEccC
Q psy4876 356 LGTVQLWDVSA--KK-------KCRTMDGHDVR--VGAL---AW---N-TYILSSGSRCGNIVHHDVRSRDHKVALLQNH 417 (609)
Q Consensus 356 dg~I~iwd~~~--~~-------~~~~l~~h~~~--V~~l---~~---~-~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h 417 (609)
-..+.||.+.. +. .+..+..|.-. ...+ .| . .+.+++-+.||.+.+++-+.-. ....+..
T Consensus 96 P~kl~vY~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~-f~~~lp~- 173 (418)
T PF14727_consen 96 PRKLSVYSVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFA-FSRFLPD- 173 (418)
T ss_pred CCEEEEEEEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEE-EEEEcCC-
Confidence 46788887731 11 12222223221 2222 23 2 3788889999999999876531 1222222
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCC-----------------CCccceEeecCCcc--cEEEEEEcCCC
Q psy4876 418 TQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHT-----------------FSTQPIHSLSRHQA--AVKAIAWCPWS 478 (609)
Q Consensus 418 ~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~-----------------~~~~~~~~~~~h~~--~V~~l~~sp~~ 478 (609)
.--...+++.+.-..|++++.+..|..|........ ....+-.++.-.+. .|..+.++...
T Consensus 174 ~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~ 253 (418)
T PF14727_consen 174 FLLPGPLCYCPRTDSFVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSE 253 (418)
T ss_pred CCCCcCeEEeecCCEEEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCC
Confidence 223345678888888999998888888864321100 00111122221111 22333343344
Q ss_pred CcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEE-EEcC----CCC---eEEEEEecCCCeEEEEECCCCceEEEE
Q psy4876 479 PNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCAL-LWNS----DYK---ELVSAHGFAQNQLIIWKYPSLVKVAEL 550 (609)
Q Consensus 479 ~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl-~~s~----~g~---~l~~~sG~~dg~I~Iwd~~~~~~~~~l 550 (609)
..+++.| .+.+.+.+- +|......+......++ .|.. .+. .+++ +..++++.||.-.+. +..-
T Consensus 254 ~~IvvLg----er~Lf~l~~-~G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV--~t~t~~LlVy~d~~L--~WsA 324 (418)
T PF14727_consen 254 SDIVVLG----ERSLFCLKD-NGSLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLV--GTHTGTLLVYEDTTL--VWSA 324 (418)
T ss_pred ceEEEEe----cceEEEEcC-CCeEEEEEecCCceeeEEEEEeecccCCCCceEEEE--EecCCeEEEEeCCeE--EEec
Confidence 4566665 678888876 46665555544422222 2222 222 2444 447999999874332 2222
Q ss_pred eCCCCCEEEEEE---eCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 551 HGHSARVLNLAM---SPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 551 ~~h~~~V~~l~~---spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
.....+| ++.. ..-...|++-+.+|.|.+-=+-+...
T Consensus 325 ~l~~~PV-al~v~~~~~~~G~IV~Ls~~G~L~v~YLGTdPs 364 (418)
T PF14727_consen 325 QLPHVPV-ALSVANFNGLKGLIVSLSDEGQLSVSYLGTDPS 364 (418)
T ss_pred CCCCCCE-EEEecccCCCCceEEEEcCCCcEEEEEeCCCCc
Confidence 2222232 3332 22345788888899998876655543
No 384
>KOG2395|consensus
Probab=96.62 E-value=0.032 Score=59.16 Aligned_cols=143 Identities=13% Similarity=0.190 Sum_probs=98.4
Q ss_pred cCCCEEEE-EeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---------CCEEEEEecCCeEEEEEcCCCCe-eEEE
Q psy4876 345 QEGYMLGV-GTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---------TYILSSGSRCGNIVHHDVRSRDH-KVAL 413 (609)
Q Consensus 345 pdg~~Las-gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---------~~~L~sgs~dg~I~iwd~~~~~~-~~~~ 413 (609)
.+.++|+. +.....++=.|++.|+.+....-|.. |.-+.+. ...-+.|-.+..|.-||.+.... .+..
T Consensus 343 ~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~ 421 (644)
T KOG2395|consen 343 ADSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAV 421 (644)
T ss_pred cccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeee
Confidence 34444443 44445688889999999999887766 5555552 12334566788899999986543 2222
Q ss_pred EccC----CCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 414 LQNH----TQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 414 ~~~h----~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
.++| .....|.+-..+| ++|+|+.+|.|++||-- +. .....+.+-..+|+.|..+.+|.++|+++
T Consensus 422 ~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri-~~-----~AKTAlPgLG~~I~hVdvtadGKwil~Tc---- 490 (644)
T KOG2395|consen 422 VQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRI-GR-----RAKTALPGLGDAIKHVDVTADGKWILATC---- 490 (644)
T ss_pred eeccccccccccceeeecCCc-eEEEeecCCcEEeehhh-hh-----hhhhcccccCCceeeEEeeccCcEEEEec----
Confidence 3333 2334555555566 89999999999999973 31 33345566778999999999999999986
Q ss_pred CCeEEEEECC
Q psy4876 490 DRHIYFWNVS 499 (609)
Q Consensus 490 Dg~I~iwd~~ 499 (609)
+..+.+-++.
T Consensus 491 ~tyLlLi~t~ 500 (644)
T KOG2395|consen 491 KTYLLLIDTL 500 (644)
T ss_pred ccEEEEEEEe
Confidence 7788877764
No 385
>KOG1897|consensus
Probab=96.60 E-value=2 Score=49.35 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=76.9
Q ss_pred EEEEEcCCCCcEEEEEec--------cCCCeEEEEECCCCcee---EEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEE
Q psy4876 470 KAIAWCPWSPNVLASGGG--------TADRHIYFWNVSSGACL---DSIDTKSQVCALLWNSDYKELVSAHGFAQNQLII 538 (609)
Q Consensus 470 ~~l~~sp~~~~llasggG--------s~Dg~I~iwd~~t~~~~---~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~I 538 (609)
.++.|..|....+++|.| -..|.|.+|.+..+..+ .+....+.+.++.- -+|++++. -..+|++
T Consensus 778 ~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fngkllA~----In~~vrL 852 (1096)
T KOG1897|consen 778 ISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE-FNGKLLAG----INQSVRL 852 (1096)
T ss_pred eeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh-hCCeEEEe----cCcEEEE
Confidence 344577775667777642 23578888887763333 23333444544432 24566655 3679999
Q ss_pred EECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCc
Q psy4876 539 WKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 539 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
|++.+.+.+..-..|...+..+...-.|..++.|..-+.+.+-.....+
T Consensus 853 ye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~e 901 (1096)
T KOG1897|consen 853 YEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDE 901 (1096)
T ss_pred EEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccC
Confidence 9999887777667788889999999899999999988888776655444
No 386
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=96.56 E-value=1.3 Score=46.50 Aligned_cols=229 Identities=13% Similarity=0.124 Sum_probs=113.9
Q ss_pred CeEEEEEccCCCEEEEEeC-CC--eEEEEeCCCCeeEEEecCCCC-c-eEEEEecCCEEEEEecCCeEEEEEcCCCCeeE
Q psy4876 337 NVCSVAWIQEGYMLGVGTS-LG--TVQLWDVSAKKKCRTMDGHDV-R-VGALAWNTYILSSGSRCGNIVHHDVRSRDHKV 411 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~-dg--~I~iwd~~~~~~~~~l~~h~~-~-V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~ 411 (609)
+.+.=+|.+||+.|+.++. || .+.+.|+.+++..+...+-.. . -..++-..+.++-......|.-.|+.+.+ ..
T Consensus 37 YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e-~~ 115 (386)
T PF14583_consen 37 YFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLE-ER 115 (386)
T ss_dssp -TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT---EE
T ss_pred eecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCc-EE
Confidence 3344567889966665554 44 577778888776555443211 1 23333345665555555688888998874 33
Q ss_pred EEEccCCCCeEEEEEc--cCCCEEEEEeC----------------------CCcEEEEeCCCCCCCCCccceEeecCCcc
Q psy4876 412 ALLQNHTQEVCGLKWS--PDGRYLASGGN----------------------DNLLNIWSGVPGQHTFSTQPIHSLSRHQA 467 (609)
Q Consensus 412 ~~~~~h~~~V~~l~~s--pdg~~lasgs~----------------------Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~ 467 (609)
..+......+-...|. .|+..++-.-. ...|...|+.++ + ...+.....
T Consensus 116 ~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG------~-~~~v~~~~~ 188 (386)
T PF14583_consen 116 VVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTG------E-RKVVFEDTD 188 (386)
T ss_dssp EEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT---------EEEEEEESS
T ss_pred EEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCC------c-eeEEEecCc
Confidence 4444455555445664 35665543211 134666677776 2 233333456
Q ss_pred cEEEEEEcCCCCcEEEEEe-ccCCCe-EEEEECC-CCceeEEEcCC---CCeEEEEEcCCCCeEEEEEecC---CCeEEE
Q psy4876 468 AVKAIAWCPWSPNVLASGG-GTADRH-IYFWNVS-SGACLDSIDTK---SQVCALLWNSDYKELVSAHGFA---QNQLII 538 (609)
Q Consensus 468 ~V~~l~~sp~~~~llasgg-Gs~Dg~-I~iwd~~-t~~~~~~~~~~---~~v~sl~~s~~g~~l~~~sG~~---dg~I~I 538 (609)
.+..+.|+|..+.+++-|. |-.+.. -+||-++ .|.....+..+ ..+..=-|.+||..+....... +..|.-
T Consensus 189 wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~ 268 (386)
T PF14583_consen 189 WLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAG 268 (386)
T ss_dssp -EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEE
T ss_pred cccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEe
Confidence 7888999999998888763 222331 2555544 23333333322 2455667899999887654323 335677
Q ss_pred EECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC
Q psy4876 539 WKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD 575 (609)
Q Consensus 539 wd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D 575 (609)
+|..+++...... ......+-.++||++++-=|.|
T Consensus 269 ~d~~t~~~~~~~~--~p~~~H~~ss~Dg~L~vGDG~d 303 (386)
T PF14583_consen 269 YDPDTGERRRLME--MPWCSHFMSSPDGKLFVGDGGD 303 (386)
T ss_dssp E-TTT--EEEEEE--E-SEEEEEE-TTSSEEEEEE--
T ss_pred eCCCCCCceEEEe--CCceeeeEEcCCCCEEEecCCC
Confidence 7888776543222 2245566778999988765554
No 387
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.55 E-value=0.95 Score=44.97 Aligned_cols=192 Identities=13% Similarity=0.100 Sum_probs=116.4
Q ss_pred ccccCCccCCceeEEEEEecCCCeEE--EEcCC--eEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecC
Q psy4876 259 RILDAPEIQNDYYLNLIDWSHFNVLA--VALGG--SIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEG 334 (609)
Q Consensus 259 ~il~ap~~~~~~~v~~l~wsp~~lla--~s~dg--~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h 334 (609)
.++..-......+-..+.|..++.+- .|.-| .|+.+|+.+ ++......++.
T Consensus 34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~t-------------------------g~~~~~~~l~~ 88 (264)
T PF05096_consen 34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLET-------------------------GKVLQSVPLPP 88 (264)
T ss_dssp EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTT-------------------------SSEEEEEE-TT
T ss_pred EEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCC-------------------------CcEEEEEECCc
Confidence 34433333345667888886666443 33333 799999998 76666666653
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEE
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALL 414 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~ 414 (609)
.----.++.. +++.....-.++...+||..+.+.+.++.- ...=+.++.++..|+.......|+++|..+.. ....+
T Consensus 89 ~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y-~~EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~-~~~~i 165 (264)
T PF05096_consen 89 RYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLKKIGTFPY-PGEGWGLTSDGKRLIMSDGSSRLYFLDPETFK-EVRTI 165 (264)
T ss_dssp T--EEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEE--SSS--EEEECSSCEEEE-SSSEEEEE-TTT-S-EEEEE
T ss_pred cccceeEEEE-CCEEEEEEecCCeEEEEccccceEEEEEec-CCcceEEEcCCCEEEEECCccceEEECCcccc-eEEEE
Confidence 2222233333 234444566789999999999999888863 45667888888888888888899999987654 33333
Q ss_pred cc--CC---CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec---------------CCcccEEEEEE
Q psy4876 415 QN--HT---QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS---------------RHQAAVKAIAW 474 (609)
Q Consensus 415 ~~--h~---~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~---------------~h~~~V~~l~~ 474 (609)
.- .. ..++.+.|- +|...|=.=....|...|..+|.. +..+. ....-.+.|||
T Consensus 166 ~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V------~~~iDls~L~~~~~~~~~~~~~~dVLNGIAy 238 (264)
T PF05096_consen 166 QVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKV------VGWIDLSGLRPEVGRDKSRQPDDDVLNGIAY 238 (264)
T ss_dssp E-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BE------EEEEE-HHHHHHHTSTTST--TTS-EEEEEE
T ss_pred EEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeE------EEEEEhhHhhhcccccccccccCCeeEeEeE
Confidence 21 22 245566775 676666666667788888888832 22210 01345789999
Q ss_pred cCCCCcEEEEE
Q psy4876 475 CPWSPNVLASG 485 (609)
Q Consensus 475 sp~~~~llasg 485 (609)
+|....++++|
T Consensus 239 d~~~~~l~vTG 249 (264)
T PF05096_consen 239 DPETDRLFVTG 249 (264)
T ss_dssp ETTTTEEEEEE
T ss_pred eCCCCEEEEEe
Confidence 99999999997
No 388
>KOG2079|consensus
Probab=96.52 E-value=0.029 Score=64.08 Aligned_cols=92 Identities=23% Similarity=0.327 Sum_probs=70.6
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec-CCCCeEEEEEccCCCEEEEEeCCCeEE
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQ 360 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~ 360 (609)
+++++..|.|-..|+.. .+..+..-+ ..++|++++|+.+|..++.|-.+|.|.
T Consensus 102 ivi~Ts~ghvl~~d~~~--------------------------nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~ 155 (1206)
T KOG2079|consen 102 IVIGTSHGHVLLSDMTG--------------------------NLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVT 155 (1206)
T ss_pred EEEEcCchhhhhhhhhc--------------------------ccchhhcCCccCCcceeeEecCCCceeccccCCCcEE
Confidence 44566667888877754 222222223 578999999999999999999999999
Q ss_pred EEeCCCCeeEEEecCCCCceEEEEe-----cCCEEEEEecCCeE
Q psy4876 361 LWDVSAKKKCRTMDGHDVRVGALAW-----NTYILSSGSRCGNI 399 (609)
Q Consensus 361 iwd~~~~~~~~~l~~h~~~V~~l~~-----~~~~L~sgs~dg~I 399 (609)
+||+..++.++.+..|..++..+-+ .+..++++...|.+
T Consensus 156 v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gsf 199 (1206)
T KOG2079|consen 156 VWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGSF 199 (1206)
T ss_pred EEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCce
Confidence 9999999999999888877766655 24568888888863
No 389
>KOG3630|consensus
Probab=96.51 E-value=0.031 Score=64.20 Aligned_cols=147 Identities=13% Similarity=0.116 Sum_probs=91.7
Q ss_pred CCCeEEEEEccCCCEEEEEe--CCCeEEEEeCCCCeeE-----EEec------CCCCceEEEEecC---CEEEEEecCCe
Q psy4876 335 NENVCSVAWIQEGYMLGVGT--SLGTVQLWDVSAKKKC-----RTMD------GHDVRVGALAWNT---YILSSGSRCGN 398 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs--~dg~I~iwd~~~~~~~-----~~l~------~h~~~V~~l~~~~---~~L~sgs~dg~ 398 (609)
.-.|..+...+|+...++.. .+-.|..||+.+-..- +-+. ....-+.++.|++ ...+....|+.
T Consensus 100 ~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dls 179 (1405)
T KOG3630|consen 100 EIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLS 179 (1405)
T ss_pred cccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccc
Confidence 34566666777775555433 3236888998753211 1111 2234456778864 45667778899
Q ss_pred EEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC-CcccEEEEEEcCC
Q psy4876 399 IVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR-HQAAVKAIAWCPW 477 (609)
Q Consensus 399 I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~ 477 (609)
|.+..+......+..+ .....+++++|+|.|+.++.|-+.|++.-|...-... ..+..... ....|.+|+|-..
T Consensus 180 l~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik----~~ip~Pp~~e~yrvl~v~Wl~t 254 (1405)
T KOG3630|consen 180 LRVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIK----SEIPEPPVEENYRVLSVTWLST 254 (1405)
T ss_pred hhhhhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEEeeccccee----ecccCCCcCCCcceeEEEEecc
Confidence 9888776543333332 3456789999999999999999999998886543200 01111111 1467999999887
Q ss_pred CCcEEEEEe
Q psy4876 478 SPNVLASGG 486 (609)
Q Consensus 478 ~~~llasgg 486 (609)
..++++.+.
T Consensus 255 ~eflvvy~n 263 (1405)
T KOG3630|consen 255 QEFLVVYGN 263 (1405)
T ss_pred eeEEEEecc
Confidence 766666553
No 390
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=96.51 E-value=1.3 Score=46.13 Aligned_cols=235 Identities=16% Similarity=0.180 Sum_probs=122.0
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCee---EEEe----cCCCCceEEEEecC-----CEEEEEecC--------
Q psy4876 337 NVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKK---CRTM----DGHDVRVGALAWNT-----YILSSGSRC-------- 396 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~---~~~l----~~h~~~V~~l~~~~-----~~L~sgs~d-------- 396 (609)
..++|+|.|||++++ +...|.|++++ ..+.. +..+ .........+++++ ..|+.....
T Consensus 3 ~P~~~a~~pdG~l~v-~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLV-AERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEE-EETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEE-EeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 467899999997766 56689999999 44443 3333 23456778899965 344443331
Q ss_pred -CeEEEEEcCCCC-------eeEEEEcc---CCCCeEEEEEccCCCEEEEEeCCC-------------cEEEEeCCCCCC
Q psy4876 397 -GNIVHHDVRSRD-------HKVALLQN---HTQEVCGLKWSPDGRYLASGGNDN-------------LLNIWSGVPGQH 452 (609)
Q Consensus 397 -g~I~iwd~~~~~-------~~~~~~~~---h~~~V~~l~~spdg~~lasgs~Dg-------------~I~iwd~~~~~~ 452 (609)
..|.-|...... ..+..+.. ....-..|+|.|||.+.++.+..+ .|.-.+.... .
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~-~ 159 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGS-I 159 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSS-B
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCc-C
Confidence 235545544331 11122222 234567799999997766655432 2333333211 0
Q ss_pred CCC---------ccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC----------------------
Q psy4876 453 TFS---------TQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG---------------------- 501 (609)
Q Consensus 453 ~~~---------~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~---------------------- 501 (609)
... ...+. -.++. -...++|+|....|+++-.| .+..=.|.-+..|
T Consensus 160 p~dnP~~~~~~~~~~i~-A~GlR-N~~~~~~d~~tg~l~~~d~G-~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~ 236 (331)
T PF07995_consen 160 PADNPFVGDDGADSEIY-AYGLR-NPFGLAFDPNTGRLWAADNG-PDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDA 236 (331)
T ss_dssp -TTSTTTTSTTSTTTEE-EE--S-EEEEEEEETTTTEEEEEEE--SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTG
T ss_pred CCCCccccCCCceEEEE-EeCCC-ccccEEEECCCCcEEEEccC-CCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccc
Confidence 000 00111 11222 24689999984466665443 2222222212211
Q ss_pred -------ceeEEEcCCCCeEEEEEcCC-------CCeEEEEEecCCCeEEEEECCCCceEE---EE-eCCCCCEEEEEEe
Q psy4876 502 -------ACLDSIDTKSQVCALLWNSD-------YKELVSAHGFAQNQLIIWKYPSLVKVA---EL-HGHSARVLNLAMS 563 (609)
Q Consensus 502 -------~~~~~~~~~~~v~sl~~s~~-------g~~l~~~sG~~dg~I~Iwd~~~~~~~~---~l-~~h~~~V~~l~~s 563 (609)
.++..+..+..+..+.|... |.+++. ....+.|....+.....+. .+ .....++.+|++.
T Consensus 237 ~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~ 314 (331)
T PF07995_consen 237 PSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVA--DYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQG 314 (331)
T ss_dssp SS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEE--ETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEE
T ss_pred cCCCCcCccceeecCccccCceEEECCccCccccCcEEEe--cCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEc
Confidence 12333445566777777644 334444 3456778887776553332 22 2344589999999
Q ss_pred CCCCEEEEEECCCCEE
Q psy4876 564 PDETTVLSAGADETLR 579 (609)
Q Consensus 564 pdg~~L~s~s~Dg~I~ 579 (609)
|||.++++-..+|.|.
T Consensus 315 pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 315 PDGALYVSDDSDGKIY 330 (331)
T ss_dssp TTSEEEEEE-TTTTEE
T ss_pred CCCeEEEEECCCCeEe
Confidence 9999999888888874
No 391
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.35 E-value=0.46 Score=50.20 Aligned_cols=193 Identities=15% Similarity=0.164 Sum_probs=90.8
Q ss_pred CEEEEEe-cCCeEEEEEcCCCC---eeEEEEcc---CC----CCeEEEEEccCCCEEEEEeC------CCcEEEEeCCCC
Q psy4876 388 YILSSGS-RCGNIVHHDVRSRD---HKVALLQN---HT----QEVCGLKWSPDGRYLASGGN------DNLLNIWSGVPG 450 (609)
Q Consensus 388 ~~L~sgs-~dg~I~iwd~~~~~---~~~~~~~~---h~----~~V~~l~~spdg~~lasgs~------Dg~I~iwd~~~~ 450 (609)
++|+..+ .++.|+|.|+.+.. ...+++.. +. .....+-.-|+|++++++-. -|-+.+.|-++.
T Consensus 88 r~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf 167 (461)
T PF05694_consen 88 RYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETF 167 (461)
T ss_dssp -EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT-
T ss_pred CcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCccc
Confidence 4555544 66778888876432 22333321 11 11223344578888877532 245778887765
Q ss_pred CCCCCccceEeecCC---cccEEEEEEcCCCCcEEEEEe------------------ccCCCeEEEEECCCCceeEEEcC
Q psy4876 451 QHTFSTQPIHSLSRH---QAAVKAIAWCPWSPNVLASGG------------------GTADRHIYFWNVSSGACLDSIDT 509 (609)
Q Consensus 451 ~~~~~~~~~~~~~~h---~~~V~~l~~sp~~~~llasgg------------------Gs~Dg~I~iwd~~t~~~~~~~~~ 509 (609)
......... ...-..+-|.|.. +++++.. +....++.+||+.+.+.+++++.
T Consensus 168 ------~v~g~We~~~~~~~~gYDfw~qpr~-nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idL 240 (461)
T PF05694_consen 168 ------EVKGRWEKDRGPQPFGYDFWYQPRH-NVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDL 240 (461)
T ss_dssp -------EEEE--SB-TT------EEEETTT-TEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES
T ss_pred ------cccceeccCCCCCCCCCCeEEcCCC-CEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEec
Confidence 344444332 2234677788855 4555542 23467899999999999999987
Q ss_pred CC---CeEEEEEc--CCCCeEEEEEecCCCeEEEE-ECCCC----ceEEEEeCC-----------------CCCEEEEEE
Q psy4876 510 KS---QVCALLWN--SDYKELVSAHGFAQNQLIIW-KYPSL----VKVAELHGH-----------------SARVLNLAM 562 (609)
Q Consensus 510 ~~---~v~sl~~s--~~g~~l~~~sG~~dg~I~Iw-d~~~~----~~~~~l~~h-----------------~~~V~~l~~ 562 (609)
.. -...+.|. |+..+-++++. -..+|..| ....+ +++..+..- ..-|++|.+
T Consensus 241 g~~g~~pLEvRflH~P~~~~gFvg~a-Lss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~i 319 (461)
T PF05694_consen 241 GEEGQMPLEVRFLHDPDANYGFVGCA-LSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILI 319 (461)
T ss_dssp -TTEEEEEEEEE-SSTT--EEEEEEE---EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE
T ss_pred CCCCCceEEEEecCCCCccceEEEEe-ccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEE
Confidence 63 35566665 45555555444 23444444 33333 223333211 234799999
Q ss_pred eCCCCEEEEEE-CCCCEEEEEcCCCcc
Q psy4876 563 SPDETTVLSAG-ADETLRLWKIFEKVK 588 (609)
Q Consensus 563 spdg~~L~s~s-~Dg~I~iWdl~~~~~ 588 (609)
|.|.++|...+ .+|.||.||+.....
T Consensus 320 SlDDrfLYvs~W~~GdvrqYDISDP~~ 346 (461)
T PF05694_consen 320 SLDDRFLYVSNWLHGDVRQYDISDPFN 346 (461)
T ss_dssp -TTS-EEEEEETTTTEEEEEE-SSTTS
T ss_pred ccCCCEEEEEcccCCcEEEEecCCCCC
Confidence 99999997766 489999999988654
No 392
>PRK10115 protease 2; Provisional
Probab=96.33 E-value=2.9 Score=48.15 Aligned_cols=241 Identities=9% Similarity=0.065 Sum_probs=118.6
Q ss_pred CeEEEEEccCCCEEEEEeCC-----CeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEE-ecC-----CeEEEEE
Q psy4876 337 NVCSVAWIQEGYMLGVGTSL-----GTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSG-SRC-----GNIVHHD 403 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~d-----g~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sg-s~d-----g~I~iwd 403 (609)
.+..+.|+|||++|+.+... ..|++.|+.++..+...-.... ..++| +++.|+.. ..+ ..|+.|+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 46678999999999876443 3688999988764322211111 45888 55544443 322 3688888
Q ss_pred cCCCCe-eEEEEccCCCCeE-EEEEccCCCEEEEEeC---CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCC
Q psy4876 404 VRSRDH-KVALLQNHTQEVC-GLKWSPDGRYLASGGN---DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWS 478 (609)
Q Consensus 404 ~~~~~~-~~~~~~~h~~~V~-~l~~spdg~~lasgs~---Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~ 478 (609)
+.+... ....+........ .+..+.++++++..+. ++.+.+|+...... .+...+.........+. +..+
T Consensus 206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~ 280 (686)
T PRK10115 206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADA----EPFVFLPRRKDHEYSLD-HYQH 280 (686)
T ss_pred CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCC----CceEEEECCCCCEEEEE-eCCC
Confidence 887631 2233332222233 3333448887665543 45788988543211 22211211122222222 2223
Q ss_pred CcEEEEEeccCCCeEEEEECC-CCceeEEEcC--CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC-CceEEEEe-CC
Q psy4876 479 PNVLASGGGTADRHIYFWNVS-SGACLDSIDT--KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS-LVKVAELH-GH 553 (609)
Q Consensus 479 ~~llasggGs~Dg~I~iwd~~-t~~~~~~~~~--~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~-~~~~~~l~-~h 553 (609)
..++.+..+.....|...++. .++....+.. ...+..+.+. ++.|+.. ...++.-+++-+.. +..+..+. ..
T Consensus 281 ~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~l~~~-~~~~g~~~l~~~~~~~~~~~~l~~~~ 357 (686)
T PRK10115 281 RFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF--TDWLVVE-ERQRGLTSLRQINRKTREVIGIAFDD 357 (686)
T ss_pred EEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE--CCEEEEE-EEeCCEEEEEEEcCCCCceEEecCCC
Confidence 233333222233455555655 2322233333 2367778877 3344443 23566544443332 22344443 22
Q ss_pred CCCEEEEEEe--CCCC-EEEEEEC---CCCEEEEEcCCCc
Q psy4876 554 SARVLNLAMS--PDET-TVLSAGA---DETLRLWKIFEKV 587 (609)
Q Consensus 554 ~~~V~~l~~s--pdg~-~L~s~s~---Dg~I~iWdl~~~~ 587 (609)
...+..+.++ +++. ++++.+. -+.+..+|+.++.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 358 PAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred CceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 2233334444 3433 4444443 3677778876653
No 393
>PHA02713 hypothetical protein; Provisional
Probab=96.32 E-value=0.14 Score=57.30 Aligned_cols=146 Identities=13% Similarity=0.113 Sum_probs=79.2
Q ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeeE--EEecCCCCceEEEEecCCEEEEEecCC---------------------
Q psy4876 346 EGYMLGVGTSLG-----TVQLWDVSAKKKC--RTMDGHDVRVGALAWNTYILSSGSRCG--------------------- 397 (609)
Q Consensus 346 dg~~Lasgs~dg-----~I~iwd~~~~~~~--~~l~~h~~~V~~l~~~~~~L~sgs~dg--------------------- 397 (609)
+|+..++|+.++ .+..||..+.+-. ..+.........+..++.+.+.|+.++
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~ 430 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHS 430 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCcccccccccccccccccccccc
Confidence 577777787654 4888998875422 223222233344566888888888653
Q ss_pred --eEEEEEcCCCCe-eEEEEccCCCCeEEEEEccCCCEEEEEeCC------CcEEEEeCCC-CCCCCCccceEeecCCcc
Q psy4876 398 --NIVHHDVRSRDH-KVALLQNHTQEVCGLKWSPDGRYLASGGND------NLLNIWSGVP-GQHTFSTQPIHSLSRHQA 467 (609)
Q Consensus 398 --~I~iwd~~~~~~-~~~~~~~h~~~V~~l~~spdg~~lasgs~D------g~I~iwd~~~-~~~~~~~~~~~~~~~h~~ 467 (609)
.+..||..+..- .+..+...... .+++ .-+|++.+.||.+ ..|..||..+ .+- ..+..+.....
T Consensus 431 ~~~ve~YDP~td~W~~v~~m~~~r~~-~~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W----~~~~~m~~~r~ 504 (557)
T PHA02713 431 SNKVIRYDTVNNIWETLPNFWTGTIR-PGVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGW----ELITTTESRLS 504 (557)
T ss_pred cceEEEECCCCCeEeecCCCCccccc-CcEE-EECCEEEEEeCCCCCCccceeEEEecCCCCCCe----eEccccCcccc
Confidence 466788776421 11111111111 1222 2356777777754 2467899886 321 23333333333
Q ss_pred cEEEEEEcCCCCcEEEEEeccCCC--eEEEEECCCCc
Q psy4876 468 AVKAIAWCPWSPNVLASGGGTADR--HIYFWNVSSGA 502 (609)
Q Consensus 468 ~V~~l~~sp~~~~llasggGs~Dg--~I~iwd~~t~~ 502 (609)
....+.+ +..++++|| .++ .+..||..+.+
T Consensus 505 ~~~~~~~---~~~iyv~Gg--~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 505 ALHTILH---DNTIMMLHC--YESYMLQDTFNVYTYE 536 (557)
T ss_pred cceeEEE---CCEEEEEee--ecceeehhhcCccccc
Confidence 3333333 447888886 555 66777776654
No 394
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.31 E-value=0.75 Score=45.94 Aligned_cols=180 Identities=16% Similarity=0.146 Sum_probs=117.0
Q ss_pred CCCCCccccCCCccccccCCccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCcccccccccccc
Q psy4876 245 GSKPTSRYIPLTADRILDAPEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQD 322 (609)
Q Consensus 245 ~~~~~~r~i~~~p~~il~ap~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (609)
..+...++++..+.++-..|-....-.|.++.|+|+. ++++.....-.||=...
T Consensus 61 ~~r~~~~~l~~y~~~i~akpi~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~------------------------ 116 (316)
T COG3204 61 LSRYIARYLLEYRARIDAKPILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKE------------------------ 116 (316)
T ss_pred ccchhhhccCCceEEEeccccccccccccceeeCCCcceEEEecCCCceEEEEecC------------------------
Confidence 3444677888888888777665556669999999984 77777766666665444
Q ss_pred ccceeeeeeecCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEE-------ec--CC-CCceEEEEec--CCEE
Q psy4876 323 NRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRT-------MD--GH-DVRVGALAWN--TYIL 390 (609)
Q Consensus 323 ~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~-------l~--~h-~~~V~~l~~~--~~~L 390 (609)
|++.....+..-...-.+.|..+|.++++--.++.+.++.+..+..+.. +. .+ ......++|+ .+.|
T Consensus 117 -GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l 195 (316)
T COG3204 117 -GDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRL 195 (316)
T ss_pred -CceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceE
Confidence 6655555554444556788888888888888888888887765532211 11 12 5677889995 4566
Q ss_pred EEEecCCeEEEEEcCCCCe--eEEEEccCC-------CCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCC
Q psy4876 391 SSGSRCGNIVHHDVRSRDH--KVALLQNHT-------QEVCGLKWSP-DGRYLASGGNDNLLNIWSGVP 449 (609)
Q Consensus 391 ~sgs~dg~I~iwd~~~~~~--~~~~~~~h~-------~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~ 449 (609)
+.+-+-.-+.||.+..... .+.....++ ..|.++.|++ .+.+|+-+.+++.|.-.|...
T Consensus 196 ~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 196 FVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred EEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecCC
Confidence 6666655666665553321 111111222 3577888887 566777777788888887764
No 395
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.01 E-value=0.024 Score=40.50 Aligned_cols=35 Identities=17% Similarity=0.357 Sum_probs=30.4
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCee
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKK 369 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~ 369 (609)
....|.+++|+|..++||+|+.+|.|.|+.+ +++.
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 3467999999999999999999999999998 4443
No 396
>KOG2444|consensus
Probab=95.92 E-value=0.018 Score=54.95 Aligned_cols=102 Identities=16% Similarity=0.207 Sum_probs=64.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCC-eeEEEecCCCCceEEEEe---cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCC-CCe
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAK-KKCRTMDGHDVRVGALAW---NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHT-QEV 421 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~-~~~~~l~~h~~~V~~l~~---~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~-~~V 421 (609)
+..|++|+.+|.|.+|...-. ............|.++-. ++.+.++++.||.|+.|++.-. ..+.....|+ ..+
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~-k~~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPN-KVLGYVGQHNFESG 148 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccC-ceeeeeccccCCCc
Confidence 467889999999999987621 111111112223333333 3568899999999999999865 3455555566 455
Q ss_pred EEEEEccCCCEEEEE--eCCCcEEEEeCCC
Q psy4876 422 CGLKWSPDGRYLASG--GNDNLLNIWSGVP 449 (609)
Q Consensus 422 ~~l~~spdg~~lasg--s~Dg~I~iwd~~~ 449 (609)
..+..+..++.++.+ +.|..++.|++..
T Consensus 149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 149 EELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ceeEEecCCceEEeeccccchhhhhcchhh
Confidence 555555555666666 6666677776654
No 397
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=95.89 E-value=0.2 Score=54.27 Aligned_cols=152 Identities=20% Similarity=0.314 Sum_probs=88.5
Q ss_pred CCceEEEEe-cCCEEEEEe---cCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccC----C-CEEEEEeCCCcEEEEeC
Q psy4876 377 DVRVGALAW-NTYILSSGS---RCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPD----G-RYLASGGNDNLLNIWSG 447 (609)
Q Consensus 377 ~~~V~~l~~-~~~~L~sgs---~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spd----g-~~lasgs~Dg~I~iwd~ 447 (609)
-.+|..++| ||+.++-.. .+|.+++=|-. .+ +.-..|.++.|.|- - .+||+- ....|.||.+
T Consensus 19 iHPvhGlaWTDGkqVvLT~L~l~~gE~kfGds~----vi----GqFEhV~GlsW~P~~~~~~paLLAVQ-HkkhVtVWqL 89 (671)
T PF15390_consen 19 IHPVHGLAWTDGKQVVLTDLQLHNGEPKFGDSK----VI----GQFEHVHGLSWAPPCTADTPALLAVQ-HKKHVTVWQL 89 (671)
T ss_pred hccccceEecCCCEEEEEeeeeeCCccccCCcc----Ee----eccceeeeeeecCcccCCCCceEEEe-ccceEEEEEe
Confidence 357889999 776554332 23444433221 22 23346999999994 2 355554 4588999998
Q ss_pred CCCCCCCCccceEeecCC---ccc--EEEEEEcCCCCcEEEEEeccCCCeEEEEECCC--CceeEEEcCCCCeEEEEEcC
Q psy4876 448 VPGQHTFSTQPIHSLSRH---QAA--VKAIAWCPWSPNVLASGGGTADRHIYFWNVSS--GACLDSIDTKSQVCALLWNS 520 (609)
Q Consensus 448 ~~~~~~~~~~~~~~~~~h---~~~--V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t--~~~~~~~~~~~~v~sl~~s~ 520 (609)
....... .+.+.....+ .-+ -..+.|||... +|++-. ....-.+++++. ......+...+.|.+.+|.+
T Consensus 90 ~~s~~e~-~K~l~sQtcEi~e~~pvLpQGCVWHPk~~-iL~VLT--~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~ 165 (671)
T PF15390_consen 90 CPSTTER-NKLLMSQTCEIREPFPVLPQGCVWHPKKA-ILTVLT--ARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTK 165 (671)
T ss_pred ccCcccc-ccceeeeeeeccCCcccCCCcccccCCCc-eEEEEe--cCceeEeeeeeeCCceEEEeccCCceEEEEEecC
Confidence 6321111 1222111111 111 24578999775 444432 233334556653 33445567788999999999
Q ss_pred CCCeEEEEEecCCCeEEEEECC
Q psy4876 521 DYKELVSAHGFAQNQLIIWKYP 542 (609)
Q Consensus 521 ~g~~l~~~sG~~dg~I~Iwd~~ 542 (609)
||+.|+++.| ..=.-+|||-.
T Consensus 166 DG~RLVVAvG-SsLHSyiWd~~ 186 (671)
T PF15390_consen 166 DGQRLVVAVG-SSLHSYIWDSA 186 (671)
T ss_pred cCCEEEEEeC-CeEEEEEecCc
Confidence 9999999876 34556788853
No 398
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=95.72 E-value=2.9 Score=42.80 Aligned_cols=233 Identities=14% Similarity=0.183 Sum_probs=107.1
Q ss_pred ceeEEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeee-cCCCCeEEEEEccCC
Q psy4876 269 DYYLNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDL-EGNENVCSVAWIQEG 347 (609)
Q Consensus 269 ~~~v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~h~~~V~~v~~spdg 347 (609)
++.++.|.+..+..++++..+.|..- ...+ ...+.+..- .-.+....+....++
T Consensus 61 ~~~l~~I~f~~~~g~ivG~~g~ll~T-~DgG------------------------~tW~~v~l~~~lpgs~~~i~~l~~~ 115 (302)
T PF14870_consen 61 DYHLNSISFDGNEGWIVGEPGLLLHT-TDGG------------------------KTWERVPLSSKLPGSPFGITALGDG 115 (302)
T ss_dssp --EEEEEEEETTEEEEEEETTEEEEE-SSTT------------------------SS-EE----TT-SS-EEEEEEEETT
T ss_pred eeeEEEEEecCCceEEEcCCceEEEe-cCCC------------------------CCcEEeecCCCCCCCeeEEEEcCCC
Confidence 45678888876655556666543332 2221 233333211 112333444444444
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEE-EecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCR-TMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGL 424 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~-~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 424 (609)
..++ ++..|.|..= .+.|+.-. ....-...+..+.- ++.+++++..-..+.-||--... -...-..-...|..|
T Consensus 116 ~~~l-~~~~G~iy~T-~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~-w~~~~r~~~~riq~~ 192 (302)
T PF14870_consen 116 SAEL-AGDRGAIYRT-TDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTT-WQPHNRNSSRRIQSM 192 (302)
T ss_dssp EEEE-EETT--EEEE-SSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS--EEEE--SSS-EEEE
T ss_pred cEEE-EcCCCcEEEe-CCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCcc-ceEEccCccceehhc
Confidence 3333 3444544321 22233322 23334456666665 57777777665555677765432 222233356889999
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCcee
Q psy4876 425 KWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 425 ~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~ 504 (609)
.|.|++.+.+.+ ..|.|+.=+.......+. +.+..+....-.+..++|.+++ .+.++|+ .|.+ +.....|+.-
T Consensus 193 gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~-~~~~~~~~~~~~~ld~a~~~~~-~~wa~gg---~G~l-~~S~DgGktW 265 (302)
T PF14870_consen 193 GFSPDGNLWMLA-RGGQIQFSDDPDDGETWS-EPIIPIKTNGYGILDLAYRPPN-EIWAVGG---SGTL-LVSTDGGKTW 265 (302)
T ss_dssp EE-TTS-EEEEE-TTTEEEEEE-TTEEEEE----B-TTSS--S-EEEEEESSSS--EEEEES---TT-E-EEESSTTSS-
T ss_pred eecCCCCEEEEe-CCcEEEEccCCCCccccc-cccCCcccCceeeEEEEecCCC-CEEEEeC---CccE-EEeCCCCccc
Confidence 999998876654 788888877221100000 1111111223347899999875 6777764 4533 3445556554
Q ss_pred EEEcC----CCCeEEEEEcCCCCeEEEEEecCCCeEEEE
Q psy4876 505 DSIDT----KSQVCALLWNSDYKELVSAHGFAQNQLIIW 539 (609)
Q Consensus 505 ~~~~~----~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iw 539 (609)
..... .+.+..+.|..+.+-++. | .+|.|--|
T Consensus 266 ~~~~~~~~~~~n~~~i~f~~~~~gf~l--G-~~G~ll~~ 301 (302)
T PF14870_consen 266 QKDRVGENVPSNLYRIVFVNPDKGFVL--G-QDGVLLRY 301 (302)
T ss_dssp EE-GGGTTSSS---EEEEEETTEEEEE----STTEEEEE
T ss_pred eECccccCCCCceEEEEEcCCCceEEE--C-CCcEEEEe
Confidence 44432 346889999887777776 4 57776554
No 399
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.64 E-value=2.3 Score=48.82 Aligned_cols=95 Identities=17% Similarity=0.202 Sum_probs=59.4
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC-CeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSA-KKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~-~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
..-.|..|.++++|.+||..+..| |.|..+.. ......+.+....|.|= .+.+... .
T Consensus 83 ~~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Cr-----------------t~~v~~~---~- 140 (717)
T PF10168_consen 83 PLFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCR-----------------TVPVDER---F- 140 (717)
T ss_pred CceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEE-----------------EEEechh---h-
Confidence 456799999999999999988866 54544432 11112233222222221 1222111 1
Q ss_pred EEccCCCCeEEEEEccC---CCEEEEEeCCCcEEEEeCCCC
Q psy4876 413 LLQNHTQEVCGLKWSPD---GRYLASGGNDNLLNIWSGVPG 450 (609)
Q Consensus 413 ~~~~h~~~V~~l~~spd---g~~lasgs~Dg~I~iwd~~~~ 450 (609)
....+...|..+.|+|. +.+|++-..|+++++||+...
T Consensus 141 ~~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 141 FTSNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred ccCCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 12234567889999995 578999999999999999765
No 400
>KOG2395|consensus
Probab=95.64 E-value=0.26 Score=52.55 Aligned_cols=121 Identities=16% Similarity=0.117 Sum_probs=82.3
Q ss_pred cceeeeeeecCCCCeEEEEEccCCC-------EEEEEeCCCeEEEEeCCCCe--eEEEecCCC----CceEEEEe-cCCE
Q psy4876 324 RAIDHLMDLEGNENVCSVAWIQEGY-------MLGVGTSLGTVQLWDVSAKK--KCRTMDGHD----VRVGALAW-NTYI 389 (609)
Q Consensus 324 ~~~~~l~~~~h~~~V~~v~~spdg~-------~Lasgs~dg~I~iwd~~~~~--~~~~l~~h~----~~V~~l~~-~~~~ 389 (609)
|++..-+.++ ..|.-+.+.|+.+ .-++|-.|..|.-||.+-.. .+...++|. ....|++- ...+
T Consensus 366 GKIVeEWk~~--~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG~ 443 (644)
T KOG2395|consen 366 GKIVEEWKFE--DDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTESGY 443 (644)
T ss_pred ceeeeEeecc--CCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceeeecCCce
Confidence 5555555543 2377788888642 22357788889999986322 233333332 33455555 3578
Q ss_pred EEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCC
Q psy4876 390 LSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGV 448 (609)
Q Consensus 390 L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~ 448 (609)
+++|+.+|.|++||- .+......+.+...+|..|..+.||++|+..+ +..+.+.++.
T Consensus 444 IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t~ 500 (644)
T KOG2395|consen 444 IVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDTL 500 (644)
T ss_pred EEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEEe
Confidence 899999999999997 33345566788899999999999999887655 4677777754
No 401
>KOG3630|consensus
Probab=95.52 E-value=0.17 Score=58.41 Aligned_cols=149 Identities=15% Similarity=0.126 Sum_probs=94.6
Q ss_pred CeEEEEEccCCCEEEEE--eCCCcEEEEeCCCCCCCCC--ccceE---eecCCcccEEEEEEcCCCCcEEEEEeccCCCe
Q psy4876 420 EVCGLKWSPDGRYLASG--GNDNLLNIWSGVPGQHTFS--TQPIH---SLSRHQAAVKAIAWCPWSPNVLASGGGTADRH 492 (609)
Q Consensus 420 ~V~~l~~spdg~~lasg--s~Dg~I~iwd~~~~~~~~~--~~~~~---~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~ 492 (609)
.+..+...+|+...++. +++-.|..||++.-..... ..++. ..........++.|.|.-....+.+ ..|+.
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~--l~dls 179 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVD--LSDLS 179 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhh--ccccc
Confidence 45556666776654443 3445889999886532110 11111 1122234457889998765544544 37999
Q ss_pred EEEEECCCC-ceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC----CCCCEEEEEEeCCCC
Q psy4876 493 IYFWNVSSG-ACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG----HSARVLNLAMSPDET 567 (609)
Q Consensus 493 I~iwd~~t~-~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~----h~~~V~~l~~spdg~ 567 (609)
|++.-+... ..+..+......++++|+|.|+.+++ |...|++.-|.. +++....+.+ ...+|++|+|-....
T Consensus 180 l~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~i--G~nnGt~vQy~P-~leik~~ip~Pp~~e~yrvl~v~Wl~t~e 256 (1405)
T KOG3630|consen 180 LRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFI--GRNNGTEVQYEP-SLEIKSEIPEPPVEENYRVLSVTWLSTQE 256 (1405)
T ss_pred hhhhhhhhhhhhhcccCcccceeeEEeccccceeeE--ecCCCeEEEeec-ccceeecccCCCcCCCcceeEEEEeccee
Confidence 998877632 23344455668899999999999999 778888888874 4444444432 136899999988777
Q ss_pred EEEEEE
Q psy4876 568 TVLSAG 573 (609)
Q Consensus 568 ~L~s~s 573 (609)
+|++-+
T Consensus 257 flvvy~ 262 (1405)
T KOG3630|consen 257 FLVVYG 262 (1405)
T ss_pred EEEEec
Confidence 776543
No 402
>KOG1897|consensus
Probab=95.51 E-value=2 Score=49.50 Aligned_cols=152 Identities=11% Similarity=0.097 Sum_probs=97.9
Q ss_pred CeEEEEEccC-CCEEEEEeC----------CCeEEEEeCCCCeeEEEecCC--CCceEEE-EecCCEEEEEecCCeEEEE
Q psy4876 337 NVCSVAWIQE-GYMLGVGTS----------LGTVQLWDVSAKKKCRTMDGH--DVRVGAL-AWNTYILSSGSRCGNIVHH 402 (609)
Q Consensus 337 ~V~~v~~spd-g~~Lasgs~----------dg~I~iwd~~~~~~~~~l~~h--~~~V~~l-~~~~~~L~sgs~dg~I~iw 402 (609)
.|.++.|..| +.++++|+. .|.|.||....++.++....+ .+.|.++ .|+|.+||.- ...|++|
T Consensus 776 Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~fngkllA~I--n~~vrLy 853 (1096)
T KOG1897|consen 776 SIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEFNGKLLAGI--NQSVRLY 853 (1096)
T ss_pred eeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhhCCeEEEec--CcEEEEE
Confidence 4555568877 688888863 588899988775444444332 3445554 3478877654 4589999
Q ss_pred EcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEe-ecCCcccEEEEEEcCCCCcE
Q psy4876 403 DVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHS-LSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 403 d~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~-~~~h~~~V~~l~~sp~~~~l 481 (609)
++.+. ..++.-..|...+..+...-.|..+++|.--+.|.+...+..+. ..... -.-+..+.+++.+-.+.. +
T Consensus 854 e~t~~-~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg----~f~evArD~~p~Wmtaveil~~d~-y 927 (1096)
T KOG1897|consen 854 EWTTE-RELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEG----NFEEVARDYNPNWMTAVEILDDDT-Y 927 (1096)
T ss_pred Ecccc-ceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCC----ceEEeehhhCccceeeEEEecCce-E
Confidence 99876 35556667778888999988999999998888777665554321 11111 123566777777766553 3
Q ss_pred EEEEeccCCCeEEEEECC
Q psy4876 482 LASGGGTADRHIYFWNVS 499 (609)
Q Consensus 482 lasggGs~Dg~I~iwd~~ 499 (609)
+.+ ..+|.+.+....
T Consensus 928 lga---e~~gNlf~v~~d 942 (1096)
T KOG1897|consen 928 LGA---ENSGNLFTVRKD 942 (1096)
T ss_pred Eee---cccccEEEEEec
Confidence 322 356776665443
No 403
>PRK10115 protease 2; Provisional
Probab=95.49 E-value=6.5 Score=45.33 Aligned_cols=248 Identities=12% Similarity=0.009 Sum_probs=122.6
Q ss_pred ccccccCCcc---CCceeEEEEEecCCC-eEEEEcC------CeEEEEeCCCCCCCceEEecCCccccccccccccccce
Q psy4876 257 ADRILDAPEI---QNDYYLNLIDWSHFN-VLAVALG------GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAI 326 (609)
Q Consensus 257 p~~il~ap~~---~~~~~v~~l~wsp~~-lla~s~d------g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (609)
++.+||.-.+ ...+.+..+.|||++ +|+.+.| ..|++-|+.+ +..
T Consensus 111 ~~~llD~n~~a~~~~~~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~t-------------------------g~~ 165 (686)
T PRK10115 111 WETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLET-------------------------GNW 165 (686)
T ss_pred CEEEEcchhhccCCCcEEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCC-------------------------CCC
Confidence 3555554333 123668889999996 6665544 2688888877 431
Q ss_pred eeeeeecCCCCeEEEEEccCCCEEEEEeCC------CeEEEEeCCCC--eeEEEecCCCCceEEEEe---cCCEEEEEec
Q psy4876 327 DHLMDLEGNENVCSVAWIQEGYMLGVGTSL------GTVQLWDVSAK--KKCRTMDGHDVRVGALAW---NTYILSSGSR 395 (609)
Q Consensus 327 ~~l~~~~h~~~V~~v~~spdg~~Lasgs~d------g~I~iwd~~~~--~~~~~l~~h~~~V~~l~~---~~~~L~sgs~ 395 (609)
. ...+.. .-..++|.+|++.|+....+ ..|.++++.++ +....+...........+ ++.+++..+.
T Consensus 166 l-~~~i~~--~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~ 242 (686)
T PRK10115 166 Y-PELLDN--VEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLA 242 (686)
T ss_pred C-CccccC--cceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEE
Confidence 1 111111 11469999999877665442 36788888877 333444433333332222 5565554443
Q ss_pred ---CCeEEEEEcCCCCeeEEEEccCC-CCeEEEEEccCCCEEEEEeCC--C--cEEEEeCCCCCCCCCccceEeecCC-c
Q psy4876 396 ---CGNIVHHDVRSRDHKVALLQNHT-QEVCGLKWSPDGRYLASGGND--N--LLNIWSGVPGQHTFSTQPIHSLSRH-Q 466 (609)
Q Consensus 396 ---dg~I~iwd~~~~~~~~~~~~~h~-~~V~~l~~spdg~~lasgs~D--g--~I~iwd~~~~~~~~~~~~~~~~~~h-~ 466 (609)
++.+.+++..........+..+. .....+. +.. ..|..-++. . .|...++... .....+..+ .
T Consensus 243 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ly~~tn~~~~~~~l~~~~~~~~------~~~~~l~~~~~ 314 (686)
T PRK10115 243 SATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQ-HRFYLRSNRHGKNFGLYRTRVRDE------QQWEELIPPRE 314 (686)
T ss_pred CCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCC-CEEEEEEcCCCCCceEEEecCCCc------ccCeEEECCCC
Confidence 35688888532211111122222 2222222 222 333333332 2 3444444321 111233334 2
Q ss_pred -ccEEEEEEcCCCCcEEEEEeccCCCeEE--EEECCCCceeEEEcC--CCCeEEEEEc--CCCCeE-EEEEe-cCCCeEE
Q psy4876 467 -AAVKAIAWCPWSPNVLASGGGTADRHIY--FWNVSSGACLDSIDT--KSQVCALLWN--SDYKEL-VSAHG-FAQNQLI 537 (609)
Q Consensus 467 -~~V~~l~~sp~~~~llasggGs~Dg~I~--iwd~~t~~~~~~~~~--~~~v~sl~~s--~~g~~l-~~~sG-~~dg~I~ 537 (609)
..|..+.+. +..++++.. .++.-+ ++|..++ .+..+.. ...+..+.++ +++..+ +..++ ..-+.+.
T Consensus 315 ~~~i~~~~~~--~~~l~~~~~--~~g~~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y 389 (686)
T PRK10115 315 NIMLEGFTLF--TDWLVVEER--QRGLTSLRQINRKTR-EVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLF 389 (686)
T ss_pred CCEEEEEEEE--CCEEEEEEE--eCCEEEEEEEcCCCC-ceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEE
Confidence 367888887 445666653 565544 4554433 3444432 2233333344 444433 33322 2356788
Q ss_pred EEECCCCc
Q psy4876 538 IWKYPSLV 545 (609)
Q Consensus 538 Iwd~~~~~ 545 (609)
.+|..+++
T Consensus 390 ~~d~~~~~ 397 (686)
T PRK10115 390 ELDMDTGE 397 (686)
T ss_pred EEECCCCc
Confidence 88887654
No 404
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=95.45 E-value=3.8 Score=47.47 Aligned_cols=201 Identities=11% Similarity=0.066 Sum_probs=112.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCc--------eEEEEe------------------cCCEEEEEecCCeEE
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVR--------VGALAW------------------NTYILSSGSRCGNIV 400 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~--------V~~l~~------------------~~~~L~sgs~dg~I~ 400 (609)
+..|++++.++.|.-.|..+|+.+-.+...... +..+++ .+..++.++.|+.|.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 567777888899999999999887776532211 112222 234788888999999
Q ss_pred EEEcCCCCeeEEEEccCCCCeE-------------EEEEcc--CCCEEEEEeC----------CCcEEEEeCCCCCCCCC
Q psy4876 401 HHDVRSRDHKVALLQNHTQEVC-------------GLKWSP--DGRYLASGGN----------DNLLNIWSGVPGQHTFS 455 (609)
Q Consensus 401 iwd~~~~~~~~~~~~~h~~~V~-------------~l~~sp--dg~~lasgs~----------Dg~I~iwd~~~~~~~~~ 455 (609)
-.|.+++. .+..+. ..+.|. .+.-.| .+..+++|+. +|.|+-+|.++|+..+.
T Consensus 274 ALDA~TGk-~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~ 351 (764)
T TIGR03074 274 ALDADTGK-LCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA 351 (764)
T ss_pred EEECCCCC-EEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence 99999885 443332 111110 111122 2345666643 68899999999954322
Q ss_pred ccce-----------EeecCCcccE-EEEEEcCCCCcEEEEEec----------------cCCCeEEEEECCCCceeEEE
Q psy4876 456 TQPI-----------HSLSRHQAAV-KAIAWCPWSPNVLASGGG----------------TADRHIYFWNVSSGACLDSI 507 (609)
Q Consensus 456 ~~~~-----------~~~~~h~~~V-~~l~~sp~~~~llasggG----------------s~Dg~I~iwd~~t~~~~~~~ 507 (609)
.... ..+......+ ..+++++... ++..+.| ...+.|.-.|.++|+..-.+
T Consensus 352 ~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~g-lvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~ 430 (764)
T TIGR03074 352 WDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLG-LVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVF 430 (764)
T ss_pred EecCCCCcccCCCCCCEeccCCCCccCceEEcCCCC-eEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEe
Confidence 1110 0000000111 2344555443 2222211 12456777888999887766
Q ss_pred cC-CC---------CeEEEEEcC-CCC-eEEEEEecCCCeEEEEECCCCceEEEE
Q psy4876 508 DT-KS---------QVCALLWNS-DYK-ELVSAHGFAQNQLIIWKYPSLVKVAEL 550 (609)
Q Consensus 508 ~~-~~---------~v~sl~~s~-~g~-~l~~~sG~~dg~I~Iwd~~~~~~~~~l 550 (609)
.. +. +..-+.+.. +|+ .=++..+..+|.++++|-.+++.+...
T Consensus 431 Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 431 QTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred cccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 53 21 122222333 553 113333668999999999999887653
No 405
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=95.43 E-value=3.3 Score=43.99 Aligned_cols=183 Identities=9% Similarity=0.040 Sum_probs=85.1
Q ss_pred EEccCCCEEEEEeC------CCeEEEEeCCCCeeEEEecCCCC---ceEEEEec--CCEEEEEec---------------
Q psy4876 342 AWIQEGYMLGVGTS------LGTVQLWDVSAKKKCRTMDGHDV---RVGALAWN--TYILSSGSR--------------- 395 (609)
Q Consensus 342 ~~spdg~~Lasgs~------dg~I~iwd~~~~~~~~~l~~h~~---~V~~l~~~--~~~L~sgs~--------------- 395 (609)
-.-|+|+.++++-. -|-+.++|-++.+.......... --..+-|. .+.+++...
T Consensus 136 Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~ 215 (461)
T PF05694_consen 136 HCLPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDL 215 (461)
T ss_dssp EE-SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTH
T ss_pred eecCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHh
Confidence 33467877776432 24688888887777666553221 12233333 345555432
Q ss_pred -----CCeEEEEEcCCCCeeEEEEccCC--CCeEEEEEcc--CCCE-EEEEeCCCcEEEEeC-CCCCCCCCccceEeecC
Q psy4876 396 -----CGNIVHHDVRSRDHKVALLQNHT--QEVCGLKWSP--DGRY-LASGGNDNLLNIWSG-VPGQHTFSTQPIHSLSR 464 (609)
Q Consensus 396 -----dg~I~iwd~~~~~~~~~~~~~h~--~~V~~l~~sp--dg~~-lasgs~Dg~I~iwd~-~~~~~~~~~~~~~~~~~ 464 (609)
..++.+||+.++ +.++++.--. ..+..|.|.. +..+ |+.+.-...|..|-- ..+. +..+.+..+..
T Consensus 216 ~~~~yG~~l~vWD~~~r-~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~--W~a~kVi~ip~ 292 (461)
T PF05694_consen 216 EAGKYGHSLHVWDWSTR-KLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGE--WAAEKVIDIPA 292 (461)
T ss_dssp HHH-S--EEEEEETTTT-EEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTE--EEEEEEEEE--
T ss_pred hcccccCeEEEEECCCC-cEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCC--eeeeEEEECCC
Confidence 357999999997 4666665332 2355677754 4444 333333445555533 3321 21122222211
Q ss_pred -----------------CcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc---eeEEEcCC--------------
Q psy4876 465 -----------------HQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA---CLDSIDTK-------------- 510 (609)
Q Consensus 465 -----------------h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~---~~~~~~~~-------------- 510 (609)
-..-|+.|..+.|.++|.+++ -.+|.|+.||+.... .+..+...
T Consensus 293 ~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~--W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~ 370 (461)
T PF05694_consen 293 KKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSN--WLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGK 370 (461)
T ss_dssp EE--SS---GGGGGG-EE------EEE-TTS-EEEEEE--TTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS---
T ss_pred cccCcccccccccccccCCCceEeEEEccCCCEEEEEc--ccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCcccccc
Confidence 134578999999999888887 479999999998643 33333222
Q ss_pred ---CCeEEEEEcCCCCeEEEEE
Q psy4876 511 ---SQVCALLWNSDYKELVSAH 529 (609)
Q Consensus 511 ---~~v~sl~~s~~g~~l~~~s 529 (609)
+...-+..|.||+.|+++.
T Consensus 371 ~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 371 RLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp ---S----EEE-TTSSEEEEE-
T ss_pred ccCCCCCeEEEccCCeEEEEEe
Confidence 2346788999999998854
No 406
>PHA03098 kelch-like protein; Provisional
Probab=95.42 E-value=0.58 Score=52.26 Aligned_cols=191 Identities=10% Similarity=0.125 Sum_probs=89.4
Q ss_pred EEEEecCCEEEEEecCC------eEEEEEcCCCCeeEEEEcc---CCCCeEEEEEccCCCEEEEEeCC-----CcEEEEe
Q psy4876 381 GALAWNTYILSSGSRCG------NIVHHDVRSRDHKVALLQN---HTQEVCGLKWSPDGRYLASGGND-----NLLNIWS 446 (609)
Q Consensus 381 ~~l~~~~~~L~sgs~dg------~I~iwd~~~~~~~~~~~~~---h~~~V~~l~~spdg~~lasgs~D-----g~I~iwd 446 (609)
.++..++.+++.|+.++ .+..||..+.. ...+.. ..... +++ .-++.+++.||.+ ..+..||
T Consensus 289 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~R~~~-~~~-~~~~~lyv~GG~~~~~~~~~v~~yd 364 (534)
T PHA03098 289 GSVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKS--WNKVPELIYPRKNP-GVT-VFNNRIYVIGGIYNSISLNTVESWK 364 (534)
T ss_pred eEEEECCEEEEECCCcCCCCeeccEEEEeCCCCe--eeECCCCCcccccc-eEE-EECCEEEEEeCCCCCEecceEEEEc
Confidence 34555777777777543 46778877643 122211 11111 222 2367778888865 3577888
Q ss_pred CCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCC----CeEEEEECCCCceeEEEcCCC--CeEEEEEcC
Q psy4876 447 GVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTAD----RHIYFWNVSSGACLDSIDTKS--QVCALLWNS 520 (609)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~D----g~I~iwd~~t~~~~~~~~~~~--~v~sl~~s~ 520 (609)
..+... .....+....... +++.. +..+++.||-..+ ..+..||..+++-...-.... .-.+++ ..
T Consensus 365 ~~~~~W----~~~~~lp~~r~~~-~~~~~--~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~ 436 (534)
T PHA03098 365 PGESKW----REEPPLIFPRYNP-CVVNV--NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAI-YH 436 (534)
T ss_pred CCCCce----eeCCCcCcCCccc-eEEEE--CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEE-EE
Confidence 876532 1111111111111 12222 3467777752122 468889987654322111111 111122 22
Q ss_pred CCCeEEEEEecCC-------CeEEEEECCCCc--eEEEEeCCCCCEEEEEEeCCCCEEEEEECC-----CCEEEEEcCCC
Q psy4876 521 DYKELVSAHGFAQ-------NQLIIWKYPSLV--KVAELHGHSARVLNLAMSPDETTVLSAGAD-----ETLRLWKIFEK 586 (609)
Q Consensus 521 ~g~~l~~~sG~~d-------g~I~Iwd~~~~~--~~~~l~~h~~~V~~l~~spdg~~L~s~s~D-----g~I~iWdl~~~ 586 (609)
++ .+++.+|... ..+.+||..+.+ .+..+.........+.+ ++..++.||.+ ..|.+||..+.
T Consensus 437 ~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 437 DG-KIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred CC-EEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCC
Confidence 33 4444434321 237888876543 22222111111112222 67777777654 46777777654
No 407
>KOG2079|consensus
Probab=95.31 E-value=0.056 Score=61.88 Aligned_cols=112 Identities=16% Similarity=0.267 Sum_probs=77.4
Q ss_pred CCCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCC
Q psy4876 376 HDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFS 455 (609)
Q Consensus 376 h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~ 455 (609)
....+.+.+.-+..++.|+..|.+...|....-.....-..-.++|++++|+.+|..++.|-.+|.|.+||+..+
T Consensus 88 ~~~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~----- 162 (1206)
T KOG2079|consen 88 IAAGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA----- 162 (1206)
T ss_pred CCcceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCC-----
Confidence 344555566667778888888999888887631111222234578999999999999999999999999999988
Q ss_pred ccceEeecCCcccEEEEE---EcCCCCcEEEEEeccCCCeEEEEEC
Q psy4876 456 TQPIHSLSRHQAAVKAIA---WCPWSPNVLASGGGTADRHIYFWNV 498 (609)
Q Consensus 456 ~~~~~~~~~h~~~V~~l~---~sp~~~~llasggGs~Dg~I~iwd~ 498 (609)
..++.+..|..++.++- |..++. .+.++ ...|. +|.+
T Consensus 163 -k~l~~i~e~~ap~t~vi~v~~t~~nS-~llt~--D~~Gs--f~~l 202 (1206)
T KOG2079|consen 163 -KILKVITEHGAPVTGVIFVGRTSQNS-KLLTS--DTGGS--FWKL 202 (1206)
T ss_pred -cceeeeeecCCccceEEEEEEeCCCc-EEEEc--cCCCc--eEEE
Confidence 67777777777666554 334443 44443 23343 5554
No 408
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=95.25 E-value=4.9 Score=42.50 Aligned_cols=141 Identities=16% Similarity=0.209 Sum_probs=75.3
Q ss_pred CCeEEEEEccCCCEEEEEe-----------CCC-eEEEEeCCC--Ce--eEEEecCCCCceEEEEec-CCEEEEEecCCe
Q psy4876 336 ENVCSVAWIQEGYMLGVGT-----------SLG-TVQLWDVSA--KK--KCRTMDGHDVRVGALAWN-TYILSSGSRCGN 398 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs-----------~dg-~I~iwd~~~--~~--~~~~l~~h~~~V~~l~~~-~~~L~sgs~dg~ 398 (609)
.....|+|.++|+++++-. ..+ .|.+++-.+ ++ ....+...-.....+++. +. |++++....
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~~~~~i 92 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVATPPDI 92 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEeCCCeE
Confidence 4567899999998877642 223 777776543 22 223443334455777773 33 555554433
Q ss_pred EEEEEcCCC-----C-eeE-EEEcc----CCCCeEEEEEccCCCEEEEEeCC-------------------CcEEEEeCC
Q psy4876 399 IVHHDVRSR-----D-HKV-ALLQN----HTQEVCGLKWSPDGRYLASGGND-------------------NLLNIWSGV 448 (609)
Q Consensus 399 I~iwd~~~~-----~-~~~-~~~~~----h~~~V~~l~~spdg~~lasgs~D-------------------g~I~iwd~~ 448 (609)
+++.|.... . +.+ ..+.. +......++|.|||.+.++-+.. |.|.-++..
T Consensus 93 ~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pd 172 (367)
T TIGR02604 93 LFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPD 172 (367)
T ss_pred EEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecC
Confidence 334454321 1 111 12222 23447789999999876654421 345555554
Q ss_pred CCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEE
Q psy4876 449 PGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASG 485 (609)
Q Consensus 449 ~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasg 485 (609)
.+ .+..+.........++|+++| .++++-
T Consensus 173 g~-------~~e~~a~G~rnp~Gl~~d~~G-~l~~td 201 (367)
T TIGR02604 173 GG-------KLRVVAHGFQNPYGHSVDSWG-DVFFCD 201 (367)
T ss_pred CC-------eEEEEecCcCCCccceECCCC-CEEEEc
Confidence 43 122222222334689999987 455553
No 409
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.14 E-value=3.9 Score=40.77 Aligned_cols=155 Identities=15% Similarity=0.124 Sum_probs=86.7
Q ss_pred CCeEEEEEccCCCEEEEEe---CCCeEEEEeCCCCeeEEEecCCCCceEEEEec--CCEEEEEecCCeEEEEE-cCCCCe
Q psy4876 336 ENVCSVAWIQEGYMLGVGT---SLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--TYILSSGSRCGNIVHHD-VRSRDH 409 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs---~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~~~L~sgs~dg~I~iwd-~~~~~~ 409 (609)
..+.+.+++++|..+|... ....+.++.. +.....+. ....+..-.|+ +...+....+....++. ...+..
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTG 100 (253)
T ss_pred ccccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcc
Confidence 3789999999998777655 2234555543 33333321 22266667774 45555555455555553 222222
Q ss_pred eEEEEccC--CCCeEEEEEccCCCEEEEEe---CCCcEEEEeCCCCCCC---CCccceEeecCCcccEEEEEEcCCCCcE
Q psy4876 410 KVALLQNH--TQEVCGLKWSPDGRYLASGG---NDNLLNIWSGVPGQHT---FSTQPIHSLSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 410 ~~~~~~~h--~~~V~~l~~spdg~~lasgs---~Dg~I~iwd~~~~~~~---~~~~~~~~~~~h~~~V~~l~~sp~~~~l 481 (609)
........ ...|..+.+||||..+|... .++.|++=-+...... ....++.........+.+++|.+++. |
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~-L 179 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDST-L 179 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCE-E
Confidence 22222211 12899999999999887766 3467777654432211 11123333334456889999999884 5
Q ss_pred EEEEeccCCCeEEE
Q psy4876 482 LASGGGTADRHIYF 495 (609)
Q Consensus 482 lasggGs~Dg~I~i 495 (609)
++.+. ..+..+..
T Consensus 180 ~V~~~-~~~~~~~~ 192 (253)
T PF10647_consen 180 VVLGR-SAGGPVVR 192 (253)
T ss_pred EEEeC-CCCCceeE
Confidence 55443 34554443
No 410
>PHA03098 kelch-like protein; Provisional
Probab=95.13 E-value=0.66 Score=51.78 Aligned_cols=150 Identities=12% Similarity=0.044 Sum_probs=75.1
Q ss_pred cCCCEEEEEeCCC------eEEEEeCCCCeeEEE--ecCCCCceEEEEecCCEEEEEecCC-----eEEEEEcCCCCee-
Q psy4876 345 QEGYMLGVGTSLG------TVQLWDVSAKKKCRT--MDGHDVRVGALAWNTYILSSGSRCG-----NIVHHDVRSRDHK- 410 (609)
Q Consensus 345 pdg~~Lasgs~dg------~I~iwd~~~~~~~~~--l~~h~~~V~~l~~~~~~L~sgs~dg-----~I~iwd~~~~~~~- 410 (609)
.++..+++|+.++ .+..||..+.+-... +.........+..++.+++.|+.++ .+..||..+..-.
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 372 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWRE 372 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCceee
Confidence 3455666676542 577888877654221 1112223344556788888888653 4677887764311
Q ss_pred EEEEccCCCCeEEEEEccCCCEEEEEeCC------CcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEE
Q psy4876 411 VALLQNHTQEVCGLKWSPDGRYLASGGND------NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLAS 484 (609)
Q Consensus 411 ~~~~~~h~~~V~~l~~spdg~~lasgs~D------g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llas 484 (609)
...+. +...-.+++ .-++.+.+.||.+ +.+..||..+..- ..+..+........++.. +..+++.
T Consensus 373 ~~~lp-~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W----~~~~~~p~~r~~~~~~~~---~~~iyv~ 443 (534)
T PHA03098 373 EPPLI-FPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKW----SKGSPLPISHYGGCAIYH---DGKIYVI 443 (534)
T ss_pred CCCcC-cCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCee----eecCCCCccccCceEEEE---CCEEEEE
Confidence 11111 111111122 2356777777732 4588899876532 111111111111112222 3467777
Q ss_pred EeccCC------CeEEEEECCCCce
Q psy4876 485 GGGTAD------RHIYFWNVSSGAC 503 (609)
Q Consensus 485 ggGs~D------g~I~iwd~~t~~~ 503 (609)
||.... ..+.+||..+++-
T Consensus 444 GG~~~~~~~~~~~~v~~yd~~~~~W 468 (534)
T PHA03098 444 GGISYIDNIKVYNIVESYNPVTNKW 468 (534)
T ss_pred CCccCCCCCcccceEEEecCCCCce
Confidence 752221 2388899887653
No 411
>KOG2444|consensus
Probab=95.12 E-value=0.03 Score=53.50 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=66.7
Q ss_pred EEEEEeccCCCeEEEEECCC-CceeEEEcCC-CC-eEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCC-CC
Q psy4876 481 VLASGGGTADRHIYFWNVSS-GACLDSIDTK-SQ-VCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHS-AR 556 (609)
Q Consensus 481 llasggGs~Dg~I~iwd~~t-~~~~~~~~~~-~~-v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~-~~ 556 (609)
-+++| +.+|.|++|+... |.....+... .. .+.+.--.++.+.++ +..+|.|+.|++.-.+.+...-.|. ..
T Consensus 72 ~~~vG--~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~--~~~dg~ir~~n~~p~k~~g~~g~h~~~~ 147 (238)
T KOG2444|consen 72 KLMVG--TSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCV--GAQDGRIRACNIKPNKVLGYVGQHNFES 147 (238)
T ss_pred eEEee--cccceEEEecCCccchHHHhhhcccccceeccccccccceeEE--eccCCceeeeccccCceeeeeccccCCC
Confidence 44444 4899999998862 2211111111 12 222333334444555 5589999999998888887777777 66
Q ss_pred EEEEEEeCCCCEEEEE--ECCCCEEEEEcCCCc
Q psy4876 557 VLNLAMSPDETTVLSA--GADETLRLWKIFEKV 587 (609)
Q Consensus 557 V~~l~~spdg~~L~s~--s~Dg~I~iWdl~~~~ 587 (609)
+.....+..+.+|+.+ |.|..++.|++..-.
T Consensus 148 ~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~~ 180 (238)
T KOG2444|consen 148 GEELIVVGSDEFLKIADTSHDRVLKKWNVEKIK 180 (238)
T ss_pred cceeEEecCCceEEeeccccchhhhhcchhhhh
Confidence 6666667777778877 888888888886533
No 412
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=94.99 E-value=4.6 Score=40.79 Aligned_cols=218 Identities=12% Similarity=0.127 Sum_probs=126.7
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCC-------CCeeEEEecC-----CCCceEEEEecC--------------CEE
Q psy4876 337 NVCSVAWIQEGYMLGVGTSLGTVQLWDVS-------AKKKCRTMDG-----HDVRVGALAWNT--------------YIL 390 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~dg~I~iwd~~-------~~~~~~~l~~-----h~~~V~~l~~~~--------------~~L 390 (609)
.-+.|+++|.+.+-++....+...+||.. ...++.++.. .....+.+.|++ ..+
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 45689999999888888888999999986 1233444442 234567777742 236
Q ss_pred EEEecCCeEEEEEcCCCCe----eEEEEc-cC-CCCeEEEEEccC--CCEEEEE-eCCCcEEEEeCCCCCCCCCccceEe
Q psy4876 391 SSGSRCGNIVHHDVRSRDH----KVALLQ-NH-TQEVCGLKWSPD--GRYLASG-GNDNLLNIWSGVPGQHTFSTQPIHS 461 (609)
Q Consensus 391 ~sgs~dg~I~iwd~~~~~~----~~~~~~-~h-~~~V~~l~~spd--g~~lasg-s~Dg~I~iwd~~~~~~~~~~~~~~~ 461 (609)
+.+++||+|.-|....... ....+. .. ..--..+++... +.+|..+ -..++|.|+|-.-.... .-..
T Consensus 104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~----~~g~ 179 (336)
T TIGR03118 104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPP----LPGS 179 (336)
T ss_pred EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCcccccc----CCCC
Confidence 7788999999998543322 122222 11 223345565532 4444433 35688888875432100 0001
Q ss_pred ecCC-----cccEEEEEEcCCCCcEEEEEe-----------ccCCCeEEEEECCCCceeEEEcCCC---CeEEEEEcC--
Q psy4876 462 LSRH-----QAAVKAIAWCPWSPNVLASGG-----------GTADRHIYFWNVSSGACLDSIDTKS---QVCALLWNS-- 520 (609)
Q Consensus 462 ~~~h-----~~~V~~l~~sp~~~~llasgg-----------Gs~Dg~I~iwd~~t~~~~~~~~~~~---~v~sl~~s~-- 520 (609)
+... -.+..-... +..|+++-. |.--|.|-+||+. |..++.+.... ..+.|+..|
T Consensus 180 F~DP~iPagyAPFnIqni---g~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~ 255 (336)
T TIGR03118 180 FIDPALPAGYAPFNVQNL---GGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPES 255 (336)
T ss_pred ccCCCCCCCCCCcceEEE---CCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhh
Confidence 1110 111110011 123333321 1235789999975 77888776543 455666644
Q ss_pred ----CCCeEEEEEecCCCeEEEEECCCCceEEEEeCCC------CCEEEEEEeC
Q psy4876 521 ----DYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHS------ARVLNLAMSP 564 (609)
Q Consensus 521 ----~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~------~~V~~l~~sp 564 (609)
.+.+|+- .+.||+|..||..+++.+..+.... ..++.|+|..
T Consensus 256 FG~~sg~lLVG--NFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 256 FGSLSGALLVG--NFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred hCCCCCCeEEe--ecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 3555555 5679999999999999888876543 3568888875
No 413
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=94.91 E-value=2.1 Score=46.79 Aligned_cols=170 Identities=14% Similarity=0.203 Sum_probs=97.8
Q ss_pred CCeEEEEEccCCCEEE-EEe--CCCeEEEEeCCCCeeEEEecCCCCceEEEEec------CCEEEEEecCCeEEEEEcCC
Q psy4876 336 ENVCSVAWIQEGYMLG-VGT--SLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN------TYILSSGSRCGNIVHHDVRS 406 (609)
Q Consensus 336 ~~V~~v~~spdg~~La-sgs--~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~------~~~L~sgs~dg~I~iwd~~~ 406 (609)
.+|..++|. ||+.++ +.- .+|.+++=| .+.+..| ..|..+.|. ...|++......|.||.+.-
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd---s~viGqF----EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~ 91 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD---SKVIGQF----EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCP 91 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCC---ccEeecc----ceeeeeeecCcccCCCCceEEEeccceEEEEEecc
Confidence 578889997 554443 322 234443322 2334443 458889993 22555666778999998862
Q ss_pred CC----eeEEEEcc-C----CCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCC
Q psy4876 407 RD----HKVALLQN-H----TQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPW 477 (609)
Q Consensus 407 ~~----~~~~~~~~-h----~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~ 477 (609)
.. +.+..... . .---.++.|+|....|++-.....=.+++++... ..+..-....+.|.|.+|.+|
T Consensus 92 s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~-----srVkaDi~~~G~IhCACWT~D 166 (671)
T PF15390_consen 92 STTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDS-----SRVKADIKTSGLIHCACWTKD 166 (671)
T ss_pred CccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCC-----ceEEEeccCCceEEEEEecCc
Confidence 21 11111111 1 1123467899999988887765544556665442 233332346788999999999
Q ss_pred CCcEEEEEeccCCCeEEEEECCCCce-----eEEEcCCCCeEEEEEcC
Q psy4876 478 SPNVLASGGGTADRHIYFWNVSSGAC-----LDSIDTKSQVCALLWNS 520 (609)
Q Consensus 478 ~~~llasggGs~Dg~I~iwd~~t~~~-----~~~~~~~~~v~sl~~s~ 520 (609)
|.+|+++-| ..=.-++||-..... .-.|+.++.|+++.-.-
T Consensus 167 G~RLVVAvG--SsLHSyiWd~~qKtL~~CsfcPVFdv~~~Icsi~AT~ 212 (671)
T PF15390_consen 167 GQRLVVAVG--SSLHSYIWDSAQKTLHRCSFCPVFDVGGYICSIEATV 212 (671)
T ss_pred CCEEEEEeC--CeEEEEEecCchhhhhhCCcceeecCCCceEEEEEec
Confidence 988877654 355678898653321 12344455555554433
No 414
>KOG1916|consensus
Probab=94.89 E-value=0.032 Score=62.49 Aligned_cols=136 Identities=18% Similarity=0.254 Sum_probs=82.2
Q ss_pred CCCeEEEEEcc---CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCe
Q psy4876 335 NENVCSVAWIQ---EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDH 409 (609)
Q Consensus 335 ~~~V~~v~~sp---dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~ 409 (609)
...+.-|.|.| +.-++..+-.+|.|++....+... ..+.+|..++..++| .|.+++.+
T Consensus 180 gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~---------------- 242 (1283)
T KOG1916|consen 180 GSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLAS---------------- 242 (1283)
T ss_pred CCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhhee----------------
Confidence 34455666665 557777788888888877665332 445568888887776 22211111
Q ss_pred eEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcc-cEEEEEEcCC-------CCcE
Q psy4876 410 KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQA-AVKAIAWCPW-------SPNV 481 (609)
Q Consensus 410 ~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~-~V~~l~~sp~-------~~~l 481 (609)
.||||..||.++.||.++.|.+.-.. .....+++..+.|.+ +-.|..++.. +.+.
T Consensus 243 ----------------lSpDGtv~a~a~~dG~v~f~Qiyi~g-~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~ 305 (1283)
T KOG1916|consen 243 ----------------LSPDGTVFAWAISDGSVGFYQIYITG-KIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWV 305 (1283)
T ss_pred ----------------eCCCCcEEEEeecCCccceeeeeeec-cccHhhhhccCCCCCCCceeeeeccccccCCccceeE
Confidence 78899999999999988888764221 111256666666763 3333332221 1222
Q ss_pred EEEEeccCCCeEEEEECCCCcee
Q psy4876 482 LASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 482 lasggGs~Dg~I~iwd~~t~~~~ 504 (609)
+...+....+.+++|.....+|+
T Consensus 306 ~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 306 LRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred EEEecccCCcceeEeeccchhhh
Confidence 22222246678999998888777
No 415
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.87 E-value=1 Score=50.42 Aligned_cols=117 Identities=15% Similarity=0.203 Sum_probs=75.0
Q ss_pred eeec-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEec-CCCCceEEEEe----cCCEEEEEecCCeEEEEE
Q psy4876 330 MDLE-GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMD-GHDVRVGALAW----NTYILSSGSRCGNIVHHD 403 (609)
Q Consensus 330 ~~~~-h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~-~h~~~V~~l~~----~~~~L~sgs~dg~I~iwd 403 (609)
.+++ .-..++-+.-+.-++..++-.....+.|||...+.....-. ...+.|.++.| ++..+++.+-...|.++-
T Consensus 23 ~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 23 STFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred EEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 3443 33455555555555555555555689999999876443322 45788999999 577788888888888874
Q ss_pred cC-----CCC---eeEEE--EccCC-CCeEEEEEccCCCEEEEEeCCCcEEEEeCC
Q psy4876 404 VR-----SRD---HKVAL--LQNHT-QEVCGLKWSPDGRYLASGGNDNLLNIWSGV 448 (609)
Q Consensus 404 ~~-----~~~---~~~~~--~~~h~-~~V~~l~~spdg~~lasgs~Dg~I~iwd~~ 448 (609)
-. ... ..+.. +..|+ .+|.+..|.++|.+++.+ ++.+.|+|-.
T Consensus 103 Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk~ 156 (631)
T PF12234_consen 103 QLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDKW 156 (631)
T ss_pred ccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECCC
Confidence 31 111 11222 33444 689999999999655544 3678888743
No 416
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=94.84 E-value=4.8 Score=40.30 Aligned_cols=196 Identities=11% Similarity=0.039 Sum_probs=117.0
Q ss_pred CCceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCC-CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCC
Q psy4876 377 DVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHT-QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFS 455 (609)
Q Consensus 377 ~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~-~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~ 455 (609)
..-+..+.+.+++...+..+.-++|.|+.+...+...-.-.. +.-.++ .-.|++..++..|.-+.+.|+.+.+..
T Consensus 86 ~~l~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv--~vsGn~aYVadlddgfLivdvsdpssP-- 161 (370)
T COG5276 86 RDLFADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGV--YVSGNYAYVADLDDGFLIVDVSDPSSP-- 161 (370)
T ss_pred hhhhheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEE--EecCCEEEEeeccCcEEEEECCCCCCc--
Confidence 345666777889999999999999999998764433322122 333343 445889988887777889999876422
Q ss_pred ccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCc---eeEEEcCCCCeEEEEEcCCCCeEEEEEecC
Q psy4876 456 TQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA---CLDSIDTKSQVCALLWNSDYKELVSAHGFA 532 (609)
Q Consensus 456 ~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~---~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~ 532 (609)
+....+......-..++.+- +.-+++. .|+-+.+.|+.... .+...+....+.++..+++.-+++. -
T Consensus 162 -~lagrya~~~~d~~~v~ISG--n~AYvA~---~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vv----y 231 (370)
T COG5276 162 -QLAGRYALPGGDTHDVAISG--NYAYVAW---RDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVV----Y 231 (370)
T ss_pred -eeeeeeccCCCCceeEEEec--CeEEEEE---eCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEE----c
Confidence 34444444444445666654 3344443 68889999997543 4455556667888888888877776 2
Q ss_pred CCeEEEEECCCCceEEEEeC-CCCCEEEE-EEeCCCCEEEEEECCCCEEEEEcCCC
Q psy4876 533 QNQLIIWKYPSLVKVAELHG-HSARVLNL-AMSPDETTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 533 dg~I~Iwd~~~~~~~~~l~~-h~~~V~~l-~~spdg~~L~s~s~Dg~I~iWdl~~~ 586 (609)
+.-+.+-|.........+-. ....+.++ .+.-.|++...+..+.-+.+-|+.+.
T Consensus 232 ~egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp 287 (370)
T COG5276 232 DEGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNP 287 (370)
T ss_pred ccceEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccCC
Confidence 44566666655443322211 11111111 22223445555555555555555543
No 417
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=94.78 E-value=7.9 Score=44.96 Aligned_cols=154 Identities=11% Similarity=0.080 Sum_probs=92.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccE-------------EEEEEcC--CCCcEEEEEec-------
Q psy4876 430 GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAV-------------KAIAWCP--WSPNVLASGGG------- 487 (609)
Q Consensus 430 g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V-------------~~l~~sp--~~~~llasggG------- 487 (609)
+..++.++.|+.|.-.|.++| +.+..+.. .+.| ..+.-.| .+ .++++|+.
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TG------k~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~-g~VIvG~~v~d~~~~ 331 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTG------KLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAG-TTVVIGGRVADNYST 331 (764)
T ss_pred CCEEEEecCCCeEEEEECCCC------CEEEEecC-CCceeeecccCcCCCcccccccCCEEEC-CEEEEEecccccccc
Confidence 447888889999999999998 44433321 1111 0011111 02 24444431
Q ss_pred -cCCCeEEEEECCCCceeEEEcCCC------------------Ce-EEEEEcCCCCeEEEEEec----------------
Q psy4876 488 -TADRHIYFWNVSSGACLDSIDTKS------------------QV-CALLWNSDYKELVSAHGF---------------- 531 (609)
Q Consensus 488 -s~Dg~I~iwd~~t~~~~~~~~~~~------------------~v-~sl~~s~~g~~l~~~sG~---------------- 531 (609)
..+|.|+-+|..+|+.+-.+.... .+ ..+++++....++...|.
T Consensus 332 ~~~~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~ 411 (764)
T TIGR03074 332 DEPSGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEK 411 (764)
T ss_pred cCCCcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCccc
Confidence 126889999999999887765310 11 344566666666554331
Q ss_pred CCCeEEEEECCCCceEEEEeCCCCCEEE---------EEEeC-CCC---EEEEEECCCCEEEEEcCCCccchh
Q psy4876 532 AQNQLIIWKYPSLVKVAELHGHSARVLN---------LAMSP-DET---TVLSAGADETLRLWKIFEKVKSKK 591 (609)
Q Consensus 532 ~dg~I~Iwd~~~~~~~~~l~~h~~~V~~---------l~~sp-dg~---~L~s~s~Dg~I~iWdl~~~~~~~k 591 (609)
..+.|.-.|..+++..-.++.....+++ +.+.- +|+ .|+.++.+|.+.+.|-.+++..-.
T Consensus 412 y~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~ 484 (764)
T TIGR03074 412 YSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP 484 (764)
T ss_pred ccceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence 1345667788899888777541111111 22322 563 889999999999999999887654
No 418
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=94.73 E-value=0.15 Score=47.88 Aligned_cols=96 Identities=26% Similarity=0.368 Sum_probs=52.7
Q ss_pred eEEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccc-----cccc-c---ccceeee--eee--c--CC
Q psy4876 271 YLNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTS-----KCIQ-D---NRAIDHL--MDL--E--GN 335 (609)
Q Consensus 271 ~v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~---~~~~~~l--~~~--~--h~ 335 (609)
+.++|+||.||.||+..+..|+|.+..+...........+....... .... . ....... ..+ . ..
T Consensus 6 ~~~~l~WS~Dg~laV~t~~~v~IL~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~ 85 (173)
T PF12657_consen 6 CPNALAWSEDGQLAVATGESVHILDPQTPNSLSKSFIPRPLTLPPSSIQWPITSIRRNLFTSSEWPTESPRSMDDEEISS 85 (173)
T ss_pred CCcCeeECCCCCEEEEcCCeEEEEeccCCcccccccccCCcccccccCCCccceEecCccccccCceecccccccccccc
Confidence 35789999999999999999999955543200000000000000000 0000 0 0000000 000 0 12
Q ss_pred CCeEEEEEccCC------CEEEEEeCCCeEEEEeCCC
Q psy4876 336 ENVCSVAWIQEG------YMLGVGTSLGTVQLWDVSA 366 (609)
Q Consensus 336 ~~V~~v~~spdg------~~Lasgs~dg~I~iwd~~~ 366 (609)
..|.+++|||-| .+||+.+.+|.|.||....
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 389999999954 5788899999999998653
No 419
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.62 E-value=2.9 Score=41.59 Aligned_cols=158 Identities=15% Similarity=0.201 Sum_probs=92.1
Q ss_pred EEEEccCCCEEEEEeCC-----CeEEEEeCCCC-eeEEEecCCCCceEEEEe--cCCEEEEEecCCeEEEE-E-------
Q psy4876 340 SVAWIQEGYMLGVGTSL-----GTVQLWDVSAK-KKCRTMDGHDVRVGALAW--NTYILSSGSRCGNIVHH-D------- 403 (609)
Q Consensus 340 ~v~~spdg~~Lasgs~d-----g~I~iwd~~~~-~~~~~l~~h~~~V~~l~~--~~~~L~sgs~dg~I~iw-d------- 403 (609)
.=.|||||.+|+..-.| |.|-|||...+ +.+.++..|.-.-..+.| ||..++.+. |-|..+ |
T Consensus 118 HGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lN 195 (366)
T COG3490 118 HGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELN 195 (366)
T ss_pred ccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC--CceecccccCccccc
Confidence 34699999999875443 78999999754 567778888777777777 777777653 334443 2
Q ss_pred cCCCCeeEE-------------EEc--cCCCCeEEEEEccCCCEEEEEeCCCc-----EEEEeCCCCCCCCCccceEeec
Q psy4876 404 VRSRDHKVA-------------LLQ--NHTQEVCGLKWSPDGRYLASGGNDNL-----LNIWSGVPGQHTFSTQPIHSLS 463 (609)
Q Consensus 404 ~~~~~~~~~-------------~~~--~h~~~V~~l~~spdg~~lasgs~Dg~-----I~iwd~~~~~~~~~~~~~~~~~ 463 (609)
++..+..+. ++. .+.-.|..++..+||..++-+-..|. -.+=-...+ +++.-+.
T Consensus 196 ldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g------~~l~~~~ 269 (366)
T COG3490 196 LDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKG------EPLEFLD 269 (366)
T ss_pred hhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCC------CcCcccC
Confidence 222111111 111 23345777788778776555433221 000001111 2222111
Q ss_pred -------CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEE
Q psy4876 464 -------RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSI 507 (609)
Q Consensus 464 -------~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~ 507 (609)
.....|-+|+.+-+...+.++. -..+...+||..+|..+..-
T Consensus 270 ~pee~~~~~anYigsiA~n~~~glV~lTS--P~GN~~vi~da~tG~vv~~a 318 (366)
T COG3490 270 LPEEQTAAFANYIGSIAANRRDGLVALTS--PRGNRAVIWDAATGAVVSEA 318 (366)
T ss_pred CCHHHHHHHHhhhhheeecccCCeEEEec--CCCCeEEEEEcCCCcEEecc
Confidence 1234567788877665666665 36778899999999877553
No 420
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.47 E-value=1.1 Score=50.13 Aligned_cols=110 Identities=21% Similarity=0.332 Sum_probs=73.0
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEc--CCCCcEEEEEeccCCCeEEEEE
Q psy4876 420 EVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWC--PWSPNVLASGGGTADRHIYFWN 497 (609)
Q Consensus 420 ~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~s--p~~~~llasggGs~Dg~I~iwd 497 (609)
...-+.-+.-++..++-+....+.|||.+.+.. +.-..+ ...+.|.++.|. |++..++++| ....|.+|-
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~l----E~~~~f-~~~~~I~dLDWtst~d~qsiLaVG---f~~~v~l~~ 102 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVL----EYEESF-SEDDPIRDLDWTSTPDGQSILAVG---FPHHVLLYT 102 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEE----EEeeee-cCCCceeeceeeecCCCCEEEEEE---cCcEEEEEE
Confidence 334444444455444444456799999997731 122223 456789999985 6888889988 688888875
Q ss_pred CC---------CCceeEEEc----CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEEC
Q psy4876 498 VS---------SGACLDSID----TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541 (609)
Q Consensus 498 ~~---------t~~~~~~~~----~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~ 541 (609)
-. +...+..++ +..+|.+..|.++|..++.+ .+++.|+|-
T Consensus 103 Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s----GNqlfv~dk 155 (631)
T PF12234_consen 103 QLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS----GNQLFVFDK 155 (631)
T ss_pred ccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe----CCEEEEECC
Confidence 42 123444443 23579999999999888763 589999985
No 421
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.41 E-value=1.6 Score=46.22 Aligned_cols=148 Identities=11% Similarity=0.113 Sum_probs=82.0
Q ss_pred CCeEEEEEccCCCEEEEEe-----------CCC-cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEe
Q psy4876 419 QEVCGLKWSPDGRYLASGG-----------NDN-LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG 486 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs-----------~Dg-~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasgg 486 (609)
.....|+|.++|+++++-. ..+ .|.+++-..+.... .....+.........+++.+++ ++++.
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~--d~~~vfa~~l~~p~Gi~~~~~G--lyV~~- 88 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKY--DKSNVFAEELSMVTGLAVAVGG--VYVAT- 88 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCc--ceeEEeecCCCCccceeEecCC--EEEeC-
Confidence 3466789999999777643 223 67777654432111 2223343334456889998877 66653
Q ss_pred ccCCCeEEEE-ECCCC-----ce--e-EEEcC-----CCCeEEEEEcCCCCeEEEEEecC-----------------CCe
Q psy4876 487 GTADRHIYFW-NVSSG-----AC--L-DSIDT-----KSQVCALLWNSDYKELVSAHGFA-----------------QNQ 535 (609)
Q Consensus 487 Gs~Dg~I~iw-d~~t~-----~~--~-~~~~~-----~~~v~sl~~s~~g~~l~~~sG~~-----------------dg~ 535 (609)
...|..| |.... +. + ..+.. +.....+.|.|+|.+.++..... .+.
T Consensus 89 ---~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~ 165 (367)
T TIGR02604 89 ---PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGG 165 (367)
T ss_pred ---CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCce
Confidence 3345444 54321 11 1 12222 23477899999997666542110 134
Q ss_pred EEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECC
Q psy4876 536 LIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD 575 (609)
Q Consensus 536 I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~D 575 (609)
|.-++...++ +..+.........++|+++|.++++-..+
T Consensus 166 i~r~~pdg~~-~e~~a~G~rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 166 LFRYNPDGGK-LRVVAHGFQNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred EEEEecCCCe-EEEEecCcCCCccceECCCCCEEEEccCC
Confidence 5555554433 22332222335789999999987765433
No 422
>PRK13684 Ycf48-like protein; Provisional
Probab=94.26 E-value=8 Score=40.33 Aligned_cols=151 Identities=14% Similarity=0.110 Sum_probs=84.8
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEE
Q psy4876 418 TQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWN 497 (609)
Q Consensus 418 ~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd 497 (609)
...+.++.+.+++.+++++.. |.+..- .+.+.. ....+ ...-...+.++.+.+++. ++++| ..|.+++=.
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~~-G~i~~s-~~~gg~--tW~~~--~~~~~~~l~~i~~~~~g~-~~~vg---~~G~~~~~s 241 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSSR-GNFYST-WEPGQT--AWTPH--QRNSSRRLQSMGFQPDGN-LWMLA---RGGQIRFND 241 (334)
T ss_pred cceEEEEEECCCCeEEEEeCC-ceEEEE-cCCCCC--eEEEe--eCCCcccceeeeEcCCCC-EEEEe---cCCEEEEcc
Confidence 457889999999877766654 555432 111210 01111 223345788999999875 55555 456665323
Q ss_pred CCCCceeEEEcC-----CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe---CCCCCEEEEEEeCCCCEE
Q psy4876 498 VSSGACLDSIDT-----KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH---GHSARVLNLAMSPDETTV 569 (609)
Q Consensus 498 ~~t~~~~~~~~~-----~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~---~h~~~V~~l~~spdg~~L 569 (609)
...|..-..... ...+.++.+.+++..+++ | .+|.|. .....++.-.... .-......+.|..++..+
T Consensus 242 ~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~--G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (334)
T PRK13684 242 PDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAG--G-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGF 317 (334)
T ss_pred CCCCCccccccCCccccccceeeEEEcCCCCEEEE--c-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceE
Confidence 444443222221 235788999998876665 3 466554 3344443333322 122357788887666654
Q ss_pred EEEECCCCEEEEEc
Q psy4876 570 LSAGADETLRLWKI 583 (609)
Q Consensus 570 ~s~s~Dg~I~iWdl 583 (609)
+ ++..|.|--|+-
T Consensus 318 ~-~G~~G~il~~~~ 330 (334)
T PRK13684 318 V-LGQRGVLLRYVG 330 (334)
T ss_pred E-ECCCceEEEecC
Confidence 4 567788877653
No 423
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=94.25 E-value=6.5 Score=39.18 Aligned_cols=188 Identities=11% Similarity=0.133 Sum_probs=116.1
Q ss_pred eeeeeecC--CCCeEEEEEccCCCEEEEEeCCC--eEEEEeCCCCeeEEEecCCC-CceEEEEe-cCCEEEEEecCCeEE
Q psy4876 327 DHLMDLEG--NENVCSVAWIQEGYMLGVGTSLG--TVQLWDVSAKKKCRTMDGHD-VRVGALAW-NTYILSSGSRCGNIV 400 (609)
Q Consensus 327 ~~l~~~~h--~~~V~~v~~spdg~~Lasgs~dg--~I~iwd~~~~~~~~~l~~h~-~~V~~l~~-~~~~L~sgs~dg~I~ 400 (609)
+.+.+++| ..-...+.|..+|.++-+.+.-| .|+.+|+.+++.+....-.. ---..++. ++.+....-.++...
T Consensus 34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f 113 (264)
T PF05096_consen 34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGF 113 (264)
T ss_dssp EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEE
Confidence 34445554 34556788878887777776666 79999999998766544222 11223333 455555566788999
Q ss_pred EEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC--Cc---ccEEEEEEc
Q psy4876 401 HHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR--HQ---AAVKAIAWC 475 (609)
Q Consensus 401 iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~--h~---~~V~~l~~s 475 (609)
+||..+- +.+..+. ...+=.+++ .||+.|+.......|+++|..+. +....+.. .. ..++.+.|.
T Consensus 114 ~yd~~tl-~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f------~~~~~i~V~~~g~pv~~LNELE~i 183 (264)
T PF05096_consen 114 VYDPNTL-KKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETF------KEVRTIQVTDNGRPVSNLNELEYI 183 (264)
T ss_dssp EEETTTT-EEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-------SEEEEEE-EETTEE---EEEEEEE
T ss_pred EEccccc-eEEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCccc------ceEEEEEEEECCEECCCcEeEEEE
Confidence 9999886 4555554 345667777 46677777666788999998876 33333322 22 245667776
Q ss_pred CCCCcEEEEEeccCCCeEEEEECCCCceeEEEcC----------------CCCeEEEEEcCCCCeEEEE
Q psy4876 476 PWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT----------------KSQVCALLWNSDYKELVSA 528 (609)
Q Consensus 476 p~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~----------------~~~v~sl~~s~~g~~l~~~ 528 (609)
. | .++|-- -....|...|..+|+.+..++. ..-...|+|.+....+++.
T Consensus 184 ~-G-~IyANV--W~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vT 248 (264)
T PF05096_consen 184 N-G-KIYANV--WQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVT 248 (264)
T ss_dssp T-T-EEEEEE--TTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEE
T ss_pred c-C-EEEEEe--CCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEE
Confidence 3 3 566654 3677888889999998887641 1247899999988887775
No 424
>KOG4499|consensus
Probab=93.98 E-value=3.5 Score=39.93 Aligned_cols=140 Identities=14% Similarity=0.150 Sum_probs=84.5
Q ss_pred CCCeEEEEEccCCCEEEEEeCC----------CeEEEEeCCCCeeEEEecCCCCceEEEEec---CCEEEEEecCCeEEE
Q psy4876 335 NENVCSVAWIQEGYMLGVGTSL----------GTVQLWDVSAKKKCRTMDGHDVRVGALAWN---TYILSSGSRCGNIVH 401 (609)
Q Consensus 335 ~~~V~~v~~spdg~~Lasgs~d----------g~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---~~~L~sgs~dg~I~i 401 (609)
......-..+|+|++.+ |... |.++.|-.. ..+..+...-.--..++|+ ..+.++-+.+-+|.-
T Consensus 108 knR~NDgkvdP~Gryy~-GtMad~~~~le~~~g~Ly~~~~~--h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a 184 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRYYG-GTMADFGDDLEPIGGELYSWLAG--HQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDA 184 (310)
T ss_pred hcccccCccCCCCceee-eeeccccccccccccEEEEeccC--CCceeeehhccCCccccccccCcEEEEEccCceEEee
Confidence 34455667789999844 4432 334444322 1222222222334567884 234556666777877
Q ss_pred EE--cCCCC----eeEEEEcc----CCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEE
Q psy4876 402 HD--VRSRD----HKVALLQN----HTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKA 471 (609)
Q Consensus 402 wd--~~~~~----~~~~~~~~----h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~ 471 (609)
|| ..++. ..+..++. .....-++++..+|++.+++-+.++|...|..+| +.+..+.-....|++
T Consensus 185 ~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tG------K~L~eiklPt~qits 258 (310)
T KOG4499|consen 185 YDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTG------KILLEIKLPTPQITS 258 (310)
T ss_pred eecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCC------cEEEEEEcCCCceEE
Confidence 87 44432 12222222 1123345666778999999999999999999999 778888878889999
Q ss_pred EEEcCCCCcEEE
Q psy4876 472 IAWCPWSPNVLA 483 (609)
Q Consensus 472 l~~sp~~~~lla 483 (609)
++|---.-.++.
T Consensus 259 ccFgGkn~d~~y 270 (310)
T KOG4499|consen 259 CCFGGKNLDILY 270 (310)
T ss_pred EEecCCCccEEE
Confidence 999643223443
No 425
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=93.97 E-value=0.19 Score=35.93 Aligned_cols=31 Identities=13% Similarity=0.259 Sum_probs=28.7
Q ss_pred CCCEEEEEEeCCCCEEEEEECCCCEEEEEcC
Q psy4876 554 SARVLNLAMSPDETTVLSAGADETLRLWKIF 584 (609)
Q Consensus 554 ~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~ 584 (609)
...|..++|+|...+||.+..||.|.++++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4579999999999999999999999999994
No 426
>PHA02790 Kelch-like protein; Provisional
Probab=93.83 E-value=2.9 Score=45.98 Aligned_cols=145 Identities=11% Similarity=0.000 Sum_probs=71.7
Q ss_pred cCCCEEEEEeCC--CeEEEEeCCCCeeE--EEecCCCCceEEEEecCCEEEEEecCC---eEEEEEcCCCCeeE-EEEcc
Q psy4876 345 QEGYMLGVGTSL--GTVQLWDVSAKKKC--RTMDGHDVRVGALAWNTYILSSGSRCG---NIVHHDVRSRDHKV-ALLQN 416 (609)
Q Consensus 345 pdg~~Lasgs~d--g~I~iwd~~~~~~~--~~l~~h~~~V~~l~~~~~~L~sgs~dg---~I~iwd~~~~~~~~-~~~~~ 416 (609)
-+|...++|+.+ ..+..||..+++-. ..+.........+..++.+.+.|+.++ .+..||..+..-.. ..+..
T Consensus 317 ~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~ 396 (480)
T PHA02790 317 ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYY 396 (480)
T ss_pred ECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCC
Confidence 356677777754 35888887665332 222222223344556888888888654 36678877642111 01111
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC---CCeE
Q psy4876 417 HTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA---DRHI 493 (609)
Q Consensus 417 h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~---Dg~I 493 (609)
..... +++ .-+|.+.+.|+ .+.+||..+..- ..+..+.........+.+ +..+++.||.+. -..+
T Consensus 397 ~r~~~-~~~-~~~~~IYv~GG---~~e~ydp~~~~W----~~~~~m~~~r~~~~~~v~---~~~IYviGG~~~~~~~~~v 464 (480)
T PHA02790 397 PHYKS-CAL-VFGRRLFLVGR---NAEFYCESSNTW----TLIDDPIYPRDNPELIIV---DNKLLLIGGFYRGSYIDTI 464 (480)
T ss_pred ccccc-eEE-EECCEEEEECC---ceEEecCCCCcE----eEcCCCCCCccccEEEEE---CCEEEEECCcCCCcccceE
Confidence 11111 222 23566666663 577898876532 222222211222222332 336777775211 1345
Q ss_pred EEEECCCC
Q psy4876 494 YFWNVSSG 501 (609)
Q Consensus 494 ~iwd~~t~ 501 (609)
..||..++
T Consensus 465 e~Yd~~~~ 472 (480)
T PHA02790 465 EVYNNRTY 472 (480)
T ss_pred EEEECCCC
Confidence 66666543
No 427
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=93.71 E-value=15 Score=41.46 Aligned_cols=163 Identities=14% Similarity=0.182 Sum_probs=89.1
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEE--EecC-CCC------ceEEEEe--cCCEEEEEec-CC---
Q psy4876 333 EGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCR--TMDG-HDV------RVGALAW--NTYILSSGSR-CG--- 397 (609)
Q Consensus 333 ~h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~--~l~~-h~~------~V~~l~~--~~~~L~sgs~-dg--- 397 (609)
.-.+.|..|.|..+++.+++...+|.|.+||...+.... .+.. +.. -|..... ...++++.+. ++
T Consensus 127 kl~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~ 206 (670)
T PF10395_consen 127 KLDDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKL 206 (670)
T ss_pred EcccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcE
Confidence 357889999999999999999999999999994332211 2221 222 2222221 1345555544 32
Q ss_pred eEEEEEcCCCCeeEEEEc---cCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC-----Cc-c
Q psy4876 398 NIVHHDVRSRDHKVALLQ---NHTQEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR-----HQ-A 467 (609)
Q Consensus 398 ~I~iwd~~~~~~~~~~~~---~h~~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~-----h~-~ 467 (609)
..+++.+......+..+. .+........|.- +|.+..- .++.|.+|++-.. +..+++.- .. .
T Consensus 207 ~ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l--~~~~i~~ysip~f------~~~~tI~l~~ii~~~~~ 278 (670)
T PF10395_consen 207 SYKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQL--SKKTISSYSIPNF------QIQKTISLPSIIDKESD 278 (670)
T ss_pred EEEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEE--eCCEEEEEEcCCc------eEEEEEEechhhccccc
Confidence 356777722222232222 1222222223332 5554333 5689999998765 33332221 11 1
Q ss_pred cEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEc
Q psy4876 468 AVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID 508 (609)
Q Consensus 468 ~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~ 508 (609)
.+.++. .|...++|.+ .+..|++.|+.-...+.+++
T Consensus 279 ~~vSl~-~~s~nRvLLs----~~nkIyLld~~~~siLse~~ 314 (670)
T PF10395_consen 279 DLVSLK-PPSPNRVLLS----VNNKIYLLDLKFESILSEFE 314 (670)
T ss_pred cceEee-cCCCCeEEEE----cCCEEEEEeehhhhhhhhhh
Confidence 222322 2333456664 58999999998777766665
No 428
>KOG2280|consensus
Probab=93.68 E-value=2.7 Score=47.09 Aligned_cols=181 Identities=9% Similarity=0.038 Sum_probs=95.1
Q ss_pred CeEEEEeCCCCeeEEEecCCCCceEEEEec-CCEEEEEecCCeEEEEEcCCCCeeE--EEEccCCCCeEEEEEccCCCEE
Q psy4876 357 GTVQLWDVSAKKKCRTMDGHDVRVGALAWN-TYILSSGSRCGNIVHHDVRSRDHKV--ALLQNHTQEVCGLKWSPDGRYL 433 (609)
Q Consensus 357 g~I~iwd~~~~~~~~~l~~h~~~V~~l~~~-~~~L~sgs~dg~I~iwd~~~~~~~~--~~~~~h~~~V~~l~~spdg~~l 433 (609)
-.|+||+.. |..+..+.-....+..+.|+ ...|++...+|++++|++-...... .-.......|..+.+..+|-
T Consensus 64 ~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GV-- 140 (829)
T KOG2280|consen 64 PYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGV-- 140 (829)
T ss_pred eeEEEEecc-ccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCce--
Confidence 458888875 56555554444588899995 6889999999999999986532111 11122233455555555663
Q ss_pred EEEeCCCcEEEEe-CCCCCCCCCccceEeecC-CcccEEEEEEc--CCC--CcEE-EEEeccCC-CeEEEEECCCCceeE
Q psy4876 434 ASGGNDNLLNIWS-GVPGQHTFSTQPIHSLSR-HQAAVKAIAWC--PWS--PNVL-ASGGGTAD-RHIYFWNVSSGACLD 505 (609)
Q Consensus 434 asgs~Dg~I~iwd-~~~~~~~~~~~~~~~~~~-h~~~V~~l~~s--p~~--~~ll-asggGs~D-g~I~iwd~~t~~~~~ 505 (609)
++-..+|.|.+-. .... .+.++.. ......+-+|. +++ ..++ ...- .. -.+..-+....+...
T Consensus 141 avlt~~g~v~~i~~~~~~-------~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~--~v~~~~~q~~~~~~q~~~ 211 (829)
T KOG2280|consen 141 AVLTVSGQVILINGVEEP-------KLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDV--AVGLHICQVEESRVQLHA 211 (829)
T ss_pred EEEecCCcEEEEcCCCcc-------hhhhCCCCCCccCCCcceeEecCCCcceeEEeech--hhhhcccceecccccccc
Confidence 3333445554433 2221 1122211 11111112222 111 1111 1110 00 011111111122222
Q ss_pred EEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe
Q psy4876 506 SIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH 551 (609)
Q Consensus 506 ~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~ 551 (609)
-...++.+..+..|+++++|+.-+ ..|.|.+-+....+++.++.
T Consensus 212 ~~~~~~~~~ki~VS~n~~~laLyt--~~G~i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 212 LSWPNSSVVKISVSPNRRFLALYT--ETGKIWVVSIDLSQILCEFN 255 (829)
T ss_pred cCCCCceEEEEEEcCCcceEEEEe--cCCcEEEEecchhhhhhccC
Confidence 222347788999999999999865 78999998887777666654
No 429
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=93.29 E-value=1.6 Score=46.59 Aligned_cols=143 Identities=16% Similarity=0.204 Sum_probs=92.2
Q ss_pred ccCCCEEEE-EeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec---------CCEEEEEecCCeEEEEEcCCCCeeEEE
Q psy4876 344 IQEGYMLGV-GTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN---------TYILSSGSRCGNIVHHDVRSRDHKVAL 413 (609)
Q Consensus 344 spdg~~Las-gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~---------~~~L~sgs~dg~I~iwd~~~~~~~~~~ 413 (609)
..+..+|+. |.....++-.|++.|+.+.....|...| +.|+ ...-+.|-.+..|.-.|.+..+..+..
T Consensus 476 ~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddvv--Vqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v 553 (776)
T COG5167 476 DNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDVV--VQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKV 553 (776)
T ss_pred cCCcceEEecCCCcccceeeecccceeeeEeecCCcce--eecCCchhHHhcCccceEEeecccceEEecccccCCceee
Confidence 334455443 4444567777888999998888777663 4442 223345555666777777765433322
Q ss_pred EccCCCCeEEEEEcc----CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccC
Q psy4876 414 LQNHTQEVCGLKWSP----DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTA 489 (609)
Q Consensus 414 ~~~h~~~V~~l~~sp----dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~ 489 (609)
.. ....++.-.|+. ...++|+|+..|.|++||--.- .....+.+-..+|..+....+|.++|++|
T Consensus 554 ~e-sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~------rAKtalP~lG~aIk~idvta~Gk~ilaTC---- 622 (776)
T COG5167 554 VE-SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGK------RAKTALPGLGDAIKHIDVTANGKHILATC---- 622 (776)
T ss_pred ee-ehhccccccccccccccCceEEEecCCCceeeehhhcc------hhhhcCcccccceeeeEeecCCcEEEEee----
Confidence 21 223333333332 3448999999999999996543 23334455667899999999999999987
Q ss_pred CCeEEEEECC
Q psy4876 490 DRHIYFWNVS 499 (609)
Q Consensus 490 Dg~I~iwd~~ 499 (609)
...|.+-|+.
T Consensus 623 k~yllL~d~~ 632 (776)
T COG5167 623 KNYLLLTDVP 632 (776)
T ss_pred cceEEEEecc
Confidence 6778887775
No 430
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=93.15 E-value=7.7 Score=37.28 Aligned_cols=109 Identities=15% Similarity=0.244 Sum_probs=66.9
Q ss_pred CEEEEEecCCeEEEEEcCCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCC------cEEEE---eCCCCCC-CC--
Q psy4876 388 YILSSGSRCGNIVHHDVRSRD-HKVALLQNHTQEVCGLKWSPDGRYLASGGNDN------LLNIW---SGVPGQH-TF-- 454 (609)
Q Consensus 388 ~~L~sgs~dg~I~iwd~~~~~-~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg------~I~iw---d~~~~~~-~~-- 454 (609)
+.|+.+...+.|.+|++.... .....+. .-+.|..+.++..|++|++--.+. .+++| ....... ..
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 666665677889999998433 3344444 347899999999999999964432 45554 2221100 00
Q ss_pred --------------CccceEeec-CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC
Q psy4876 455 --------------STQPIHSLS-RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG 501 (609)
Q Consensus 455 --------------~~~~~~~~~-~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~ 501 (609)
....+..++ .-...+.+++-+|-..+|++. .++.+.+|.+...
T Consensus 108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg----~~~~l~lf~l~~~ 165 (215)
T PF14761_consen 108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVG----CGNKLVLFTLKYQ 165 (215)
T ss_pred EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEE----cCCEEEEEEEEEE
Confidence 000011111 113466789999988888885 4789999987643
No 431
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=92.99 E-value=12 Score=38.31 Aligned_cols=226 Identities=13% Similarity=0.136 Sum_probs=105.1
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEec---CCCCceEEE-EecCCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 337 NVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMD---GHDVRVGAL-AWNTYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 337 ~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~---~h~~~V~~l-~~~~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
...+|.|..+ ..+++| ..| +.+...+.|+.-..+. .-......+ +.+......++..|.|+.= .+.+..-..
T Consensus 63 ~l~~I~f~~~-~g~ivG-~~g-~ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l~~~~G~iy~T-~DgG~tW~~ 138 (302)
T PF14870_consen 63 HLNSISFDGN-EGWIVG-EPG-LLLHTTDGGKTWERVPLSSKLPGSPFGITALGDGSAELAGDRGAIYRT-TDGGKTWQA 138 (302)
T ss_dssp EEEEEEEETT-EEEEEE-ETT-EEEEESSTTSS-EE----TT-SS-EEEEEEEETTEEEEEETT--EEEE-SSTTSSEEE
T ss_pred eEEEEEecCC-ceEEEc-CCc-eEEEecCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEEEcCCCcEEEe-CCCCCCeeE
Confidence 4667777543 344444 445 4444444454433332 112222333 3344444444555654432 122222223
Q ss_pred EEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCe
Q psy4876 413 LLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRH 492 (609)
Q Consensus 413 ~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~ 492 (609)
....-.+.+..+.-++||++++++.....+.-||--.. .-...-......|.+|.|.|++. +.+.+ ..+.
T Consensus 139 ~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~------~w~~~~r~~~~riq~~gf~~~~~-lw~~~---~Gg~ 208 (302)
T PF14870_consen 139 VVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQT------TWQPHNRNSSRRIQSMGFSPDGN-LWMLA---RGGQ 208 (302)
T ss_dssp EE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-S------S-EEEE--SSS-EEEEEE-TTS--EEEEE---TTTE
T ss_pred cccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCc------cceEEccCccceehhceecCCCC-EEEEe---CCcE
Confidence 33445577889999999999999877666667875432 11112223457899999999974 54443 6788
Q ss_pred EEEEEC-CCCceeEE--Ec--C-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe---CCCCCEEEEEEe
Q psy4876 493 IYFWNV-SSGACLDS--ID--T-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH---GHSARVLNLAMS 563 (609)
Q Consensus 493 I~iwd~-~t~~~~~~--~~--~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~---~h~~~V~~l~~s 563 (609)
|++=+. ...+.-.. .. . ...+..++|.+++...++ | ..|.|. .....++.-..-. .-...+..|.|.
T Consensus 209 ~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~--g-g~G~l~-~S~DgGktW~~~~~~~~~~~n~~~i~f~ 284 (302)
T PF14870_consen 209 IQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAV--G-GSGTLL-VSTDGGKTWQKDRVGENVPSNLYRIVFV 284 (302)
T ss_dssp EEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEE--E-STT-EE-EESSTTSS-EE-GGGTTSSS---EEEEE
T ss_pred EEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEE--e-CCccEE-EeCCCCccceECccccCCCCceEEEEEc
Confidence 888772 22222111 11 1 235899999998777765 3 244333 3333333322222 223457888887
Q ss_pred CCCCEEEEEECCCCEEEE
Q psy4876 564 PDETTVLSAGADETLRLW 581 (609)
Q Consensus 564 pdg~~L~s~s~Dg~I~iW 581 (609)
.+. .-+..+.||.|--|
T Consensus 285 ~~~-~gf~lG~~G~ll~~ 301 (302)
T PF14870_consen 285 NPD-KGFVLGQDGVLLRY 301 (302)
T ss_dssp ETT-EEEEE-STTEEEEE
T ss_pred CCC-ceEEECCCcEEEEe
Confidence 554 45555678877654
No 432
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=92.82 E-value=11 Score=37.51 Aligned_cols=143 Identities=15% Similarity=0.153 Sum_probs=84.2
Q ss_pred ceEEEEe--cCCEEEEEe---cCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEe-CCCCCC
Q psy4876 379 RVGALAW--NTYILSSGS---RCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWS-GVPGQH 452 (609)
Q Consensus 379 ~V~~l~~--~~~~L~sgs---~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd-~~~~~~ 452 (609)
.+...++ ++..++... ....++++..... ....+. ...+..-.|++++...+....+...+++. ...+..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~--~~~~~~--g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP--VRPVLT--GGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTG 100 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc--ceeecc--CCccccccccCCCCEEEEEcCCCceEEEEecCCCcc
Confidence 4555666 566555544 3334555554432 222222 23788889999988777777666667763 333311
Q ss_pred CCCccceEeecCCc-ccEEEEEEcCCCCcEEEEEeccCCCeEEEEECC---CCc------eeEEE-cCCCCeEEEEEcCC
Q psy4876 453 TFSTQPIHSLSRHQ-AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS---SGA------CLDSI-DTKSQVCALLWNSD 521 (609)
Q Consensus 453 ~~~~~~~~~~~~h~-~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~---t~~------~~~~~-~~~~~v~sl~~s~~ 521 (609)
..+..-.... ..|.++.++|||..+++......++.|.+--+. .+. .+... .....+..+.|.++
T Consensus 101 ----~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~ 176 (253)
T PF10647_consen 101 ----EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDD 176 (253)
T ss_pred ----eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCC
Confidence 1111111111 289999999999988776532346777776553 231 11111 12357899999999
Q ss_pred CCeEEEEE
Q psy4876 522 YKELVSAH 529 (609)
Q Consensus 522 g~~l~~~s 529 (609)
+.+++...
T Consensus 177 ~~L~V~~~ 184 (253)
T PF10647_consen 177 STLVVLGR 184 (253)
T ss_pred CEEEEEeC
Confidence 98877754
No 433
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=92.52 E-value=3.2 Score=47.69 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=26.1
Q ss_pred CCCCEEEEEEeCC---CCEEEEEECCCCEEEEEcCCCc
Q psy4876 553 HSARVLNLAMSPD---ETTVLSAGADETLRLWKIFEKV 587 (609)
Q Consensus 553 h~~~V~~l~~spd---g~~L~s~s~Dg~I~iWdl~~~~ 587 (609)
+...|..+.|+|. +..|+.-..|+++|+||+....
T Consensus 145 ~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 145 SSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence 4456788888885 4688888888888888886533
No 434
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=92.32 E-value=15 Score=37.86 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=54.8
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCee---EEEecC---CCCceEEEEecCCEEEEEecC-----CeEEEEEcCCCCe
Q psy4876 346 EGYMLGVGTSL-----GTVQLWDVSAKKK---CRTMDG---HDVRVGALAWNTYILSSGSRC-----GNIVHHDVRSRDH 409 (609)
Q Consensus 346 dg~~Lasgs~d-----g~I~iwd~~~~~~---~~~l~~---h~~~V~~l~~~~~~L~sgs~d-----g~I~iwd~~~~~~ 409 (609)
++.++++|+.+ ..+..||+.+.+. ...+.. ......+...++.+.+.|+.. ..+..||+.+..-
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~~~W 151 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLETQEW 151 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCCCCe
Confidence 45666667654 3577777766543 122221 112233344577777777742 3578888876531
Q ss_pred e-EEEEccCCCCeEEEEEccCCCEEEEEeCCC----cEEEEeCCCC
Q psy4876 410 K-VALLQNHTQEVCGLKWSPDGRYLASGGNDN----LLNIWSGVPG 450 (609)
Q Consensus 410 ~-~~~~~~h~~~V~~l~~spdg~~lasgs~Dg----~I~iwd~~~~ 450 (609)
. +..+.. .......+...++++.+.|+.++ .+.+||..+.
T Consensus 152 ~~~~~~p~-~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~ 196 (323)
T TIGR03548 152 FELPDFPG-EPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKN 196 (323)
T ss_pred eECCCCCC-CCCCcceEEEECCEEEEEcCCCCccccceEEEecCCC
Confidence 1 111111 11122222334677788887654 3568888765
No 435
>KOG2377|consensus
Probab=92.26 E-value=4.6 Score=42.71 Aligned_cols=152 Identities=13% Similarity=0.205 Sum_probs=91.8
Q ss_pred EEEEec-CCEEEEEecCCeEEEEEcCCCC--eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCcc
Q psy4876 381 GALAWN-TYILSSGSRCGNIVHHDVRSRD--HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQ 457 (609)
Q Consensus 381 ~~l~~~-~~~L~sgs~dg~I~iwd~~~~~--~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~ 457 (609)
+.+-|| .+..+.+...|.+.-|-+.... .++..-....++|.++.||+|.+.||+--.|+.|.+++....+.. ..
T Consensus 26 ngvFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~--l~ 103 (657)
T KOG2377|consen 26 NGVFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQ--LE 103 (657)
T ss_pred cceeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchh--hH
Confidence 345553 3444444455666666554332 233333345679999999999999999999999999998543210 12
Q ss_pred ceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC-CceeEEEcC-CCCeEEEEEcCCCCeEEEEEecCCCe
Q psy4876 458 PIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS-GACLDSIDT-KSQVCALLWNSDYKELVSAHGFAQNQ 535 (609)
Q Consensus 458 ~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t-~~~~~~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~ 535 (609)
..++.+.....|....|.... .+... .+.-+-+|-+.. ...++..+. .-.|.-..|+++...++.++|-..++
T Consensus 104 ~~~~ck~k~~~IlGF~W~~s~-e~A~i----~~~G~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~ 178 (657)
T KOG2377|consen 104 YTQECKTKNANILGFCWTSST-EIAFI----TDQGIEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENV 178 (657)
T ss_pred HHHHhccCcceeEEEEEecCe-eEEEE----ecCCeEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccc
Confidence 223333445568899998764 33333 244566665542 222333333 34788889999988888776644444
Q ss_pred EEEE
Q psy4876 536 LIIW 539 (609)
Q Consensus 536 I~Iw 539 (609)
+.=+
T Consensus 179 lnpf 182 (657)
T KOG2377|consen 179 LNPF 182 (657)
T ss_pred cccE
Confidence 4333
No 436
>KOG4460|consensus
Probab=92.24 E-value=3.3 Score=44.48 Aligned_cols=93 Identities=15% Similarity=0.074 Sum_probs=56.6
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec-CCEEEEEecCCeEEEEEcCCCCeeEEEE
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN-TYILSSGSRCGNIVHHDVRSRDHKVALL 414 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~-~~~L~sgs~dg~I~iwd~~~~~~~~~~~ 414 (609)
-.|..|..++.|..++..+.+|.+..+=......-..+......|.|=.+. +..|++.+
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss-------------------- 163 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSS-------------------- 163 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccC--------------------
Confidence 467888999999999999998865544322222223333333334433331 11111111
Q ss_pred ccCCCCeEEEEEccCC---CEEEEEeCCCcEEEEeCCCC
Q psy4876 415 QNHTQEVCGLKWSPDG---RYLASGGNDNLLNIWSGVPG 450 (609)
Q Consensus 415 ~~h~~~V~~l~~spdg---~~lasgs~Dg~I~iwd~~~~ 450 (609)
..-.+..++|+|+. ..|..-+.|++|++||+...
T Consensus 164 --~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~ 200 (741)
T KOG4460|consen 164 --TSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEP 200 (741)
T ss_pred --CceeeeeccccCCccCCceEEEEecCcEEEEEecCCc
Confidence 11235567899864 57888888999999999866
No 437
>PRK13684 Ycf48-like protein; Provisional
Probab=91.87 E-value=18 Score=37.70 Aligned_cols=151 Identities=12% Similarity=0.083 Sum_probs=82.7
Q ss_pred CCceEEEEec-CCEEEEEecCCeEEEEEcCCCCe-eEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCC
Q psy4876 377 DVRVGALAWN-TYILSSGSRCGNIVHHDVRSRDH-KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTF 454 (609)
Q Consensus 377 ~~~V~~l~~~-~~~L~sgs~dg~I~iwd~~~~~~-~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~ 454 (609)
...+..+.+. +..++..+..|.+..- .+.+.. -......-...+.++.+.++++.+++| ..|.+.+=..+.+..
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~~G~i~~s-~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~s-- 247 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSSRGNFYST-WEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLES-- 247 (334)
T ss_pred cceEEEEEECCCCeEEEEeCCceEEEE-cCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCc--
Confidence 4567777773 3344455556765532 112211 122223345678999999999877765 457665323343321
Q ss_pred CccceEee-cCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcC----CCCeEEEEEcCCCCeEEEEE
Q psy4876 455 STQPIHSL-SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT----KSQVCALLWNSDYKELVSAH 529 (609)
Q Consensus 455 ~~~~~~~~-~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~----~~~v~sl~~s~~g~~l~~~s 529 (609)
.+.+..- ......+.++.+.+++ .++++| .+|.|. .....|+.-..... ......+.|..+++.+++
T Consensus 248 -W~~~~~~~~~~~~~l~~v~~~~~~-~~~~~G---~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 319 (334)
T PRK13684 248 -WSKPIIPEITNGYGYLDLAYRTPG-EIWAGG---GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVL-- 319 (334)
T ss_pred -cccccCCccccccceeeEEEcCCC-CEEEEc---CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEE--
Confidence 1111110 0112357888999866 466665 466555 34444444333321 235778888888777776
Q ss_pred ecCCCeEEEEE
Q psy4876 530 GFAQNQLIIWK 540 (609)
Q Consensus 530 G~~dg~I~Iwd 540 (609)
| ..|.|..|+
T Consensus 320 G-~~G~il~~~ 329 (334)
T PRK13684 320 G-QRGVLLRYV 329 (334)
T ss_pred C-CCceEEEec
Confidence 4 577777665
No 438
>KOG2280|consensus
Probab=91.66 E-value=8.7 Score=43.27 Aligned_cols=173 Identities=20% Similarity=0.240 Sum_probs=88.4
Q ss_pred eEEEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeee--c-CCCCeEEEEEccC
Q psy4876 271 YLNLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDL--E-GNENVCSVAWIQE 346 (609)
Q Consensus 271 ~v~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~-h~~~V~~v~~spd 346 (609)
.+-.+.|+.+. ++.+..+|.+++|++.. ...+.. .+ + ....|..+.+..+
T Consensus 85 ~lI~mgWs~~eeLI~v~k~g~v~Vy~~~g-------------------------e~ie~~-svg~e~~~~~I~ec~~f~~ 138 (829)
T KOG2280|consen 85 ELIGMGWSDDEELICVQKDGTVHVYGLLG-------------------------EFIESN-SVGFESQMSDIVECRFFHN 138 (829)
T ss_pred CeeeecccCCceEEEEeccceEEEeecch-------------------------hhhccc-ccccccccCceeEEEEecC
Confidence 35669999985 99999999999999875 222221 11 1 2223444444445
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecC-CCCceEEEEe---cC----CEEEEEecCCeEEEEEcCCCCeeEEEEccCC
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDG-HDVRVGALAW---NT----YILSSGSRCGNIVHHDVRSRDHKVALLQNHT 418 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~l~~---~~----~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~ 418 (609)
|- ++-..+|.|.+-.-.....++.+.. ......+-+| .+ ..++-...--...++...........+....
T Consensus 139 GV--avlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~ 216 (829)
T KOG2280|consen 139 GV--AVLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPN 216 (829)
T ss_pred ce--EEEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCC
Confidence 53 3333445554443222222333332 1111111233 11 2222111100011222222211222222223
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec--CCcccEEEEEEcCCC
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS--RHQAAVKAIAWCPWS 478 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~--~h~~~V~~l~~sp~~ 478 (609)
+.+..+.+||++++|+--..+|.|.+-+.+.. +....+. .|. +-..++|+.+.
T Consensus 217 ~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~------~~lce~~~~~~~-~p~qm~Wcgnd 271 (829)
T KOG2280|consen 217 SSVVKISVSPNRRFLALYTETGKIWVVSIDLS------QILCEFNCTDHD-PPKQMAWCGND 271 (829)
T ss_pred ceEEEEEEcCCcceEEEEecCCcEEEEecchh------hhhhccCCCCCC-chHhceeecCC
Confidence 56888999999999999999999999888765 3333333 232 23478887654
No 439
>PHA02790 Kelch-like protein; Provisional
Probab=91.50 E-value=8.3 Score=42.45 Aligned_cols=186 Identities=10% Similarity=0.040 Sum_probs=84.3
Q ss_pred ecCCEEEEEecCC-----eEEEEEcCCCCe-eEEEEccCCCCeEEEEEccCCCEEEEEeCC--CcEEEEeCCCCCCCCCc
Q psy4876 385 WNTYILSSGSRCG-----NIVHHDVRSRDH-KVALLQNHTQEVCGLKWSPDGRYLASGGND--NLLNIWSGVPGQHTFST 456 (609)
Q Consensus 385 ~~~~~L~sgs~dg-----~I~iwd~~~~~~-~~~~~~~h~~~V~~l~~spdg~~lasgs~D--g~I~iwd~~~~~~~~~~ 456 (609)
.++.++++|+.++ .+..||..+..- .+..+....... +++ .-+|.+.+.||.+ ..+..||..+...
T Consensus 270 ~~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~-~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W---- 343 (480)
T PHA02790 270 VGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYA-SGV-PANNKLYVVGGLPNPTSVERWFHGDAAW---- 343 (480)
T ss_pred ECCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcc-eEE-EECCEEEEECCcCCCCceEEEECCCCeE----
Confidence 3566667776543 466777776421 111111111111 222 2367777888754 3578888765421
Q ss_pred cceEeecCCcccEEEEEEcCCCCcEEEEEecc-CCCeEEEEECCCCceeEEEcCCCCe-EEEEEcCCCCeEEEEEecCCC
Q psy4876 457 QPIHSLSRHQAAVKAIAWCPWSPNVLASGGGT-ADRHIYFWNVSSGACLDSIDTKSQV-CALLWNSDYKELVSAHGFAQN 534 (609)
Q Consensus 457 ~~~~~~~~h~~~V~~l~~sp~~~~llasggGs-~Dg~I~iwd~~t~~~~~~~~~~~~v-~sl~~s~~g~~l~~~sG~~dg 534 (609)
..+..+.........+.. +..+.+.||.. ....+..||..+.+-...-....+. ...+..-++ .|++. | |
T Consensus 344 ~~~~~l~~~r~~~~~~~~---~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~-~IYv~-G---G 415 (480)
T PHA02790 344 VNMPSLLKPRCNPAVASI---NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGR-RLFLV-G---R 415 (480)
T ss_pred EECCCCCCCCcccEEEEE---CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECC-EEEEE-C---C
Confidence 111122111111122222 34688887521 1245778888765432211111111 111112233 34433 3 3
Q ss_pred eEEEEECCCCc--eEEEEeCCCCCEEEEEEeCCCCEEEEEECC-----CCEEEEEcCCC
Q psy4876 535 QLIIWKYPSLV--KVAELHGHSARVLNLAMSPDETTVLSAGAD-----ETLRLWKIFEK 586 (609)
Q Consensus 535 ~I~Iwd~~~~~--~~~~l~~h~~~V~~l~~spdg~~L~s~s~D-----g~I~iWdl~~~ 586 (609)
.+.+||..+.+ .+..+.........+. -+|+..+.||.+ .+|..||..++
T Consensus 416 ~~e~ydp~~~~W~~~~~m~~~r~~~~~~v--~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 416 NAEFYCESSNTWTLIDDPIYPRDNPELII--VDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred ceEEecCCCCcEeEcCCCCCCccccEEEE--ECCEEEEECCcCCCcccceEEEEECCCC
Confidence 56788876543 2222221112222222 367777888764 34667776543
No 440
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=91.07 E-value=31 Score=38.96 Aligned_cols=161 Identities=16% Similarity=0.139 Sum_probs=87.3
Q ss_pred CCceEEEEe--cCCEEEEEecCCeEEEEEcCCCCe-eEEEEc-cCCCCeEEEEEcc------CCCEEEEEeC-C---CcE
Q psy4876 377 DVRVGALAW--NTYILSSGSRCGNIVHHDVRSRDH-KVALLQ-NHTQEVCGLKWSP------DGRYLASGGN-D---NLL 442 (609)
Q Consensus 377 ~~~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~-~~~~~~-~h~~~V~~l~~sp------dg~~lasgs~-D---g~I 442 (609)
...|..+.+ ++..+++...+|.|.+||...... .+..+. .+...+.-=+|-+ ...++++.+. + -.+
T Consensus 129 ~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~y 208 (670)
T PF10395_consen 129 DDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKLSY 208 (670)
T ss_pred ccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcEEE
Confidence 567888888 478999999999999999932211 111111 1222111112222 1234444333 2 246
Q ss_pred EEEeCCCCCCCCCccceEeec---CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCC-------CC
Q psy4876 443 NIWSGVPGQHTFSTQPIHSLS---RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK-------SQ 512 (609)
Q Consensus 443 ~iwd~~~~~~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~-------~~ 512 (609)
+++.+.... ..+..+. .+........|+-..+.+..- .++.|.+|++..-+..+++... ..
T Consensus 209 kL~~l~~~~-----~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l----~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~ 279 (670)
T PF10395_consen 209 KLISLSNES-----SSIFELSSTILENFGLEDSKFCYQFGKLYQL----SKKTISSYSIPNFQIQKTISLPSIIDKESDD 279 (670)
T ss_pred EEEEeccCC-----cceEEeehheeccCCcccceEEEeCCEEEEE----eCCEEEEEEcCCceEEEEEEechhhcccccc
Confidence 777772111 2233332 222233344444433344443 4789999999888877777644 23
Q ss_pred eEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEE
Q psy4876 513 VCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL 550 (609)
Q Consensus 513 v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l 550 (609)
+.++.--...+.|++ .++.|++.|+.-...+.++
T Consensus 280 ~vSl~~~s~nRvLLs----~~nkIyLld~~~~siLse~ 313 (670)
T PF10395_consen 280 LVSLKPPSPNRVLLS----VNNKIYLLDLKFESILSEF 313 (670)
T ss_pred ceEeecCCCCeEEEE----cCCEEEEEeehhhhhhhhh
Confidence 444443334444444 4899999998655554444
No 441
>KOG2377|consensus
Probab=90.88 E-value=3.6 Score=43.52 Aligned_cols=115 Identities=14% Similarity=0.217 Sum_probs=79.1
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeE----EEecCCCCceEEEEe-cCCEEEEEecCCeEEEEEcCCCC
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKC----RTMDGHDVRVGALAW-NTYILSSGSRCGNIVHHDVRSRD 408 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~----~~l~~h~~~V~~l~~-~~~~L~sgs~dg~I~iwd~~~~~ 408 (609)
..++|.++.|++|.+.||+--.+.+|.+++....+.. ...+.....|....| +..-++.....| +-+|.+....
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e~A~i~~~G-~e~y~v~pek 143 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIAFITDQG-IEFYQVLPEK 143 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCeeEEEEecCC-eEEEEEchhh
Confidence 6679999999999999999999999999998543322 222334556888899 456666655544 5666655444
Q ss_pred eeEEEEccCCCCeEEEEEccCCCEEEEEe--CCCcEEEEeCCC
Q psy4876 409 HKVALLQNHTQEVCGLKWSPDGRYLASGG--NDNLLNIWSGVP 449 (609)
Q Consensus 409 ~~~~~~~~h~~~V~~l~~spdg~~lasgs--~Dg~I~iwd~~~ 449 (609)
..++..+.|.-.|.-..|.++.+.+.-++ ..+++.=+-+++
T Consensus 144 rslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~ 186 (657)
T KOG2377|consen 144 RSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRA 186 (657)
T ss_pred hhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEee
Confidence 45666778888999999999887644333 344444444443
No 442
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=90.76 E-value=22 Score=37.72 Aligned_cols=92 Identities=12% Similarity=0.035 Sum_probs=42.8
Q ss_pred CCCEEEEEe-CCCeEEEEeCCCC-eeEE---EecC-CCCceEEEEecCCEEEEEecCC-----------eEEEEEcCCCC
Q psy4876 346 EGYMLGVGT-SLGTVQLWDVSAK-KKCR---TMDG-HDVRVGALAWNTYILSSGSRCG-----------NIVHHDVRSRD 408 (609)
Q Consensus 346 dg~~Lasgs-~dg~I~iwd~~~~-~~~~---~l~~-h~~~V~~l~~~~~~L~sgs~dg-----------~I~iwd~~~~~ 408 (609)
+++..+.|+ .+..+.++|+... .... .+.. .......+..++.+.+.|+... .+..||..+..
T Consensus 38 ~~~iyv~gG~~~~~~~~~d~~~~~~~W~~l~~~p~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~ 117 (376)
T PRK14131 38 NNTVYVGLGSAGTSWYKLDLNAPSKGWTKIAAFPGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNS 117 (376)
T ss_pred CCEEEEEeCCCCCeEEEEECCCCCCCeEECCcCCCCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCE
Confidence 343333333 3445777887532 1122 2211 1122234455777888877542 46778877642
Q ss_pred eeEEEEccC-CCCe--EEEEEccCCCEEEEEeCC
Q psy4876 409 HKVALLQNH-TQEV--CGLKWSPDGRYLASGGND 439 (609)
Q Consensus 409 ~~~~~~~~h-~~~V--~~l~~spdg~~lasgs~D 439 (609)
-..+... .... .+.+..-++.+.+.|+.+
T Consensus 118 --W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 118 --WQKLDTRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred --EEeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence 1111111 1111 112221467777887754
No 443
>KOG2247|consensus
Probab=90.66 E-value=0.04 Score=58.05 Aligned_cols=142 Identities=19% Similarity=0.310 Sum_probs=98.7
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC
Q psy4876 422 CGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG 501 (609)
Q Consensus 422 ~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~ 501 (609)
-...|-+.+.-++.++.+..|..||-... ..... ...+....++|..+++.+++.+. ..+.+.+||+.+.
T Consensus 38 i~~~w~~e~~nlavaca~tiv~~YD~agq-------~~le~-n~tg~aldm~wDkegdvlavlAe--k~~piylwd~n~e 107 (615)
T KOG2247|consen 38 IIHRWRPEGHNLAVACANTIVIYYDKAGQ-------VILEL-NPTGKALDMAWDKEGDVLAVLAE--KTGPIYLWDVNSE 107 (615)
T ss_pred ceeeEecCCCceehhhhhhHHHhhhhhcc-------eeccc-CCchhHhhhhhccccchhhhhhh--cCCCeeechhhhh
Confidence 34578887777888888899999986532 22222 23445567889888877766653 7899999999753
Q ss_pred cee-EEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEEECCC
Q psy4876 502 ACL-DSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADE 576 (609)
Q Consensus 502 ~~~-~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~s~Dg 576 (609)
.-. -.+.....-.-+.|++.+.+++. |...+.+.|++..+.+.+...-.|..++++++|.+.+. ++.++.|.
T Consensus 108 ytqqLE~gg~~s~sll~wsKg~~el~i--g~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd~ 180 (615)
T KOG2247|consen 108 YTQQLESGGTSSKSLLAWSKGTPELVI--GNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCDN 180 (615)
T ss_pred hHHHHhccCcchHHHHhhccCCccccc--cccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcHH
Confidence 211 12222233334789999999998 66889999999887776655544999999999998765 44444444
No 444
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=90.17 E-value=2.1 Score=41.78 Aligned_cols=71 Identities=14% Similarity=0.120 Sum_probs=46.5
Q ss_pred ceEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEE------Ec-------cCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q psy4876 379 RVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVAL------LQ-------NHTQEVCGLKWSPDGRYLASGGNDNLLNIW 445 (609)
Q Consensus 379 ~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~------~~-------~h~~~V~~l~~spdg~~lasgs~Dg~I~iw 445 (609)
.+..+..++++|++.+.+|.+++||+.+....... +. .....|..+.++.+|.-+++-++ |..+.|
T Consensus 14 ~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsn-g~~y~y 92 (219)
T PF07569_consen 14 PVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSN-GDSYSY 92 (219)
T ss_pred ceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeC-CCEEEe
Confidence 44445556777777777777777777765321111 11 24567888888888877776654 788999
Q ss_pred eCCCC
Q psy4876 446 SGVPG 450 (609)
Q Consensus 446 d~~~~ 450 (609)
+..-+
T Consensus 93 ~~~L~ 97 (219)
T PF07569_consen 93 SPDLG 97 (219)
T ss_pred ccccc
Confidence 87654
No 445
>KOG2247|consensus
Probab=89.90 E-value=0.1 Score=55.16 Aligned_cols=231 Identities=15% Similarity=0.134 Sum_probs=130.1
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEec--C-CEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN--T-YILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~--~-~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
.......|-+.+.-+++++.+-.|..||-.. +..-... ..+....++|| + ..++.+-..+.+.+||+.+......
T Consensus 35 v~pi~~~w~~e~~nlavaca~tiv~~YD~ag-q~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqL 112 (615)
T KOG2247|consen 35 VGPIIHRWRPEGHNLAVACANTIVIYYDKAG-QVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQL 112 (615)
T ss_pred cccceeeEecCCCceehhhhhhHHHhhhhhc-ceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHH
Confidence 3344567888887788888888899998543 3222222 34555667785 3 4455666788999999986532211
Q ss_pred EEcc-CCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCC
Q psy4876 413 LLQN-HTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADR 491 (609)
Q Consensus 413 ~~~~-h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg 491 (609)
.+.+ |.... +.|++.+..++.|...|.+.|++..+. +.+-..-.|...+.+++|.+.+. .+.+ +.|.
T Consensus 113 E~gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgts------R~iiv~Gkh~RRgtq~av~lEd~--vil~--dcd~ 180 (615)
T KOG2247|consen 113 ESGGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTS------RRIIVMGKHQRRGTQIAVTLEDY--VILC--DCDN 180 (615)
T ss_pred hccCcchHHH--HhhccCCccccccccccceEEEeccch------hhhhhhcccccceeEEEecccce--eeec--CcHH
Confidence 1111 22222 789999999999999999999998776 44444444889999999999763 3333 2455
Q ss_pred eEEEEECCCCceeEEEcCCCCeE--------EEEEcCCCCeEEEEEecCCCeEEEE--EC--CCCceEEEEeCCCCCEEE
Q psy4876 492 HIYFWNVSSGACLDSIDTKSQVC--------ALLWNSDYKELVSAHGFAQNQLIIW--KY--PSLVKVAELHGHSARVLN 559 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~~~~v~--------sl~~s~~g~~l~~~sG~~dg~I~Iw--d~--~~~~~~~~l~~h~~~V~~ 559 (609)
.+.+-... ++-....+.++... .=.|...|..+...- .+.+++. ++ ..+..-..++...+.+.|
T Consensus 181 ~L~v~~qe-geta~ltevggepdnm~~~y~k~n~w~kage~m~sVv---sgKkhl~yak~nE~D~pval~fq~~~gni~c 256 (615)
T KOG2247|consen 181 TLSVTTQE-GETASLTEVGGEPDNMDFFYGKVNGWGKAGETMVSVV---SGKKHLMYAKYNELDEPVALQFQEKYGNIHC 256 (615)
T ss_pred HHHHhhhc-cceeeeeeccCccchhhhheeeeeccccccceeeeee---ecHHHHHHHhhcCCCCccceEeeecCCceeE
Confidence 44433322 22222222222111 112444444444432 1222221 11 111111245555677888
Q ss_pred EEEeCCCCEEEEEECCCCEEEEEcCC
Q psy4876 560 LAMSPDETTVLSAGADETLRLWKIFE 585 (609)
Q Consensus 560 l~~spdg~~L~s~s~Dg~I~iWdl~~ 585 (609)
+.|--||..+. +-.-|.|..-...+
T Consensus 257 yrwylDg~i~i-gf~ag~iV~iS~h~ 281 (615)
T KOG2247|consen 257 YRWYLDGYILI-GFDAGYIVSISAHN 281 (615)
T ss_pred EEEeccccccc-cccceeEEEEeccc
Confidence 99988876443 33333343333333
No 446
>KOG1916|consensus
Probab=89.82 E-value=0.37 Score=54.49 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=55.3
Q ss_pred ecCCCCceEEEEe-c---CCEEEEEecCCeEEEEEcCCCC------eeEEEEccCCCCeEEEEEcc---CCCEEEEEeCC
Q psy4876 373 MDGHDVRVGALAW-N---TYILSSGSRCGNIVHHDVRSRD------HKVALLQNHTQEVCGLKWSP---DGRYLASGGND 439 (609)
Q Consensus 373 l~~h~~~V~~l~~-~---~~~L~sgs~dg~I~iwd~~~~~------~~~~~~~~h~~~V~~l~~sp---dg~~lasgs~D 439 (609)
+++..+.|..+.| + ++.. -.-|.+.|||++.-+ ..+.........+.-+.|.| +.-++..+-.+
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~---~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~ 204 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR---RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKG 204 (1283)
T ss_pred HhcCCCCcccccccccCChHHH---HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCC
Confidence 3455667777777 2 2222 334678888876422 12333344445556666766 56678888888
Q ss_pred CcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcC
Q psy4876 440 NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCP 476 (609)
Q Consensus 440 g~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 476 (609)
+.|++...... ....+.+|...+..++|..
T Consensus 205 ~~i~lL~~~ra-------~~~l~rsHs~~~~d~a~~~ 234 (1283)
T KOG1916|consen 205 GEIRLLNINRA-------LRSLFRSHSQRVTDMAFFA 234 (1283)
T ss_pred CceeEeeechH-------HHHHHHhcCCCcccHHHHh
Confidence 89888777654 2234455776666665533
No 447
>KOG1983|consensus
Probab=89.68 E-value=8.9 Score=45.94 Aligned_cols=230 Identities=12% Similarity=0.090 Sum_probs=101.8
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCC-ceEEEEe--cCCEEEEEecCCeEEEEEcCCCCeeEE
Q psy4876 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDV-RVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVA 412 (609)
Q Consensus 336 ~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~-~V~~l~~--~~~~L~sgs~dg~I~iwd~~~~~~~~~ 412 (609)
.....++|+|...++|.|+.+|.|+++-...-+.......... .+..+.| ..........+..+.+|...... .
T Consensus 36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~---~ 112 (993)
T KOG1983|consen 36 STPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKT---G 112 (993)
T ss_pred CCCcceeeccccceEEEEEecccEEEecccceEEEeccccccchhhhheeeeecccccceeecccceeeecccccc---e
Confidence 4566789999999999999999999997653332222211111 1121222 11222233344455555544321 1
Q ss_pred EEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCe
Q psy4876 413 LLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRH 492 (609)
Q Consensus 413 ~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~ 492 (609)
. .+...+.+..-.+--.+ +-| ..+.+++||..-.... .-....+..+...+ ....++.-...... .+-.
T Consensus 113 ~--~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~s~~~~~~~~~----~~~~ 181 (993)
T KOG1983|consen 113 V--FLKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLS--DLKYAGTESSNFVP-YESLSPTLSIEGLV----IDLD 181 (993)
T ss_pred e--ecCCcceeccCCCCcch-hcc-cCceeeEeeechhhhc--cceeccccccccce-eeeeccceeeeccc----cccc
Confidence 1 12333443333222223 444 7788888886532100 00000111111000 00000000000000 0111
Q ss_pred EEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCCCCCEEEEEEeCCCCEEEEE
Q psy4876 493 IYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSA 572 (609)
Q Consensus 493 I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h~~~V~~l~~spdg~~L~s~ 572 (609)
-.+|-+.... .........+.+..+....+..+. +..+.+.+|+.........+. +....++.++..++++
T Consensus 182 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~ 252 (993)
T KOG1983|consen 182 TVLISLPDAY-LGLSLIEYESLQVLYYSPTKILIG---FNRGLVVIKDRASKYVQSAYL-----PNGQLESRDGSHFVSY 252 (993)
T ss_pred cceeeccccc-ccccccccccceeeeecCCCccee---eeeeeeeehhcccccchhhcc-----cccccCccCCceEEEE
Confidence 1111111001 000011223344444333333332 245666666654333322222 1222228899999999
Q ss_pred ECCCCEEEEEcCCCcc
Q psy4876 573 GADETLRLWKIFEKVK 588 (609)
Q Consensus 573 s~Dg~I~iWdl~~~~~ 588 (609)
-.||.+.+||+..+..
T Consensus 253 h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 253 HTDGSYAFWDVSSGKL 268 (993)
T ss_pred EecCCEEeeecCCCce
Confidence 9999999999998754
No 448
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=89.58 E-value=19 Score=41.01 Aligned_cols=112 Identities=13% Similarity=0.161 Sum_probs=70.2
Q ss_pred cEEEEEEcCCC-CcEEEEEeccCCCeEEEEECCC-------C-------------ceeEEEcCCCCeEEEEEc--CCCCe
Q psy4876 468 AVKAIAWCPWS-PNVLASGGGTADRHIYFWNVSS-------G-------------ACLDSIDTKSQVCALLWN--SDYKE 524 (609)
Q Consensus 468 ~V~~l~~sp~~-~~llasggGs~Dg~I~iwd~~t-------~-------------~~~~~~~~~~~v~sl~~s--~~g~~ 524 (609)
.|+.|.....| ..+|+.+ .+||.|.+|.+.+ . ++...+..+..+++++++ ...++
T Consensus 102 tIN~i~v~~lg~~EVLl~c--~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rl 179 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLC--TDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRL 179 (717)
T ss_pred eeeEEEecccCCeeEEEEE--ecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceE
Confidence 35555544433 3455555 4899999997621 0 012233455678999998 77788
Q ss_pred EEEEEecCCCeEEEEECCCC--ceEE-EEeCCCCCEEEEEEeCCC---C---EEEEEECCCCEEEEEc
Q psy4876 525 LVSAHGFAQNQLIIWKYPSL--VKVA-ELHGHSARVLNLAMSPDE---T---TVLSAGADETLRLWKI 583 (609)
Q Consensus 525 l~~~sG~~dg~I~Iwd~~~~--~~~~-~l~~h~~~V~~l~~spdg---~---~L~s~s~Dg~I~iWdl 583 (609)
+|+++ ....|.||-+... +... .-..|...|-+|+|-++. . +|++++-.|.+.+|++
T Consensus 180 IAVSs--Ns~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 180 IAVSS--NSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEEec--CCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 88744 5566777655331 1111 111255678899997743 2 7888899999999888
No 449
>KOG1898|consensus
Probab=88.90 E-value=56 Score=38.57 Aligned_cols=102 Identities=24% Similarity=0.280 Sum_probs=60.5
Q ss_pred eEEEEECCCCceeEEEcCCC-----CeEEEEEcCCCCe-EEEEEec----------CCCeEEEEEC-CCCceEEEEeC--
Q psy4876 492 HIYFWNVSSGACLDSIDTKS-----QVCALLWNSDYKE-LVSAHGF----------AQNQLIIWKY-PSLVKVAELHG-- 552 (609)
Q Consensus 492 ~I~iwd~~t~~~~~~~~~~~-----~v~sl~~s~~g~~-l~~~sG~----------~dg~I~Iwd~-~~~~~~~~l~~-- 552 (609)
.|+++|..+++.+..+.... .++.+.|+..... ++.+.+. .+|.++.|+. ..++.+.-+..
T Consensus 854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~T~ 933 (1205)
T KOG1898|consen 854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHKTE 933 (1205)
T ss_pred eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeeccC
Confidence 47888888887766665432 5777788765554 3333221 2445677765 34444433321
Q ss_pred CCCCEEEEEEeCCCCEEEEEECCCCEEEEEcCCCccchhhhhhc
Q psy4876 553 HSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEIKN 596 (609)
Q Consensus 553 h~~~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~~~k~~~~~ 596 (609)
-.+.|. ++.|-+.++.+| ....+++|++-.....++.+.+.
T Consensus 934 ~~~~v~--Ai~~f~~~~Lag-vG~~l~~YdlG~K~lLRk~e~k~ 974 (1205)
T KOG1898|consen 934 IPGPVG--AICPFQGRVLAG-VGRFLRLYDLGKKKLLRKCELKF 974 (1205)
T ss_pred CCccce--EEeccCCEEEEe-cccEEEEeeCChHHHHhhhhhcc
Confidence 123443 445655544443 45699999998888777776654
No 450
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=88.62 E-value=2.5 Score=47.88 Aligned_cols=127 Identities=9% Similarity=0.145 Sum_probs=75.4
Q ss_pred eEEEEEec---CCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEc--
Q psy4876 271 YLNLIDWS---HFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWI-- 344 (609)
Q Consensus 271 ~v~~l~ws---p~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~s-- 344 (609)
.||.|... ... ++++..||.|.+|.++.--. .+.......... .....+.+...+.....+++++++
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~-----~i~~~~~~~~~~--~~r~~i~P~f~~~v~~SaWGLdIh~~ 174 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIE-----AIERFSEDNDSG--FSRLKIKPFFHLRVGASAWGLDIHDY 174 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHH-----HHHhhccccccc--cccccCCCCeEeecCCceeEEEEEec
Confidence 35555433 333 66688899999998754100 000000000000 000122333444456789999998
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC--eeE-EEecCCCCceEEEEe-----cCC---EEEEEecCCeEEEEEc
Q psy4876 345 QEGYMLGVGTSLGTVQLWDVSAK--KKC-RTMDGHDVRVGALAW-----NTY---ILSSGSRCGNIVHHDV 404 (609)
Q Consensus 345 pdg~~Lasgs~dg~I~iwd~~~~--~~~-~~l~~h~~~V~~l~~-----~~~---~L~sgs~dg~I~iwd~ 404 (609)
...++||+++....|.||-.... +.. ..-..|...|.+|+| ++. .|++++-.|.+.+|++
T Consensus 175 ~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 175 KKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred CcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 77899999999898988865432 111 111136778999999 222 7888999999999887
No 451
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=88.59 E-value=34 Score=35.65 Aligned_cols=91 Identities=14% Similarity=0.094 Sum_probs=42.8
Q ss_pred CCEEEEEeC-CCeEEEEeCCC-C---eeEEEecC-CCCceEEEEecCCEEEEEecC-----------CeEEEEEcCCCCe
Q psy4876 347 GYMLGVGTS-LGTVQLWDVSA-K---KKCRTMDG-HDVRVGALAWNTYILSSGSRC-----------GNIVHHDVRSRDH 409 (609)
Q Consensus 347 g~~Lasgs~-dg~I~iwd~~~-~---~~~~~l~~-h~~~V~~l~~~~~~L~sgs~d-----------g~I~iwd~~~~~~ 409 (609)
++..++|+. ...+.++|+.. . ..+..+.. -......+..++.+.+.|+.+ ..+..||..+..
T Consensus 18 ~~vyv~GG~~~~~~~~~d~~~~~~~W~~l~~~p~~~R~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~- 96 (346)
T TIGR03547 18 DKVYVGLGSAGTSWYKLDLKKPSKGWQKIADFPGGPRNQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNS- 96 (346)
T ss_pred CEEEEEccccCCeeEEEECCCCCCCceECCCCCCCCcccceEEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCCE-
Confidence 444444443 24567777632 1 22222221 112233445578888888753 246778877642
Q ss_pred eEEEEc-cCCCCeEEE-EE-ccCCCEEEEEeCC
Q psy4876 410 KVALLQ-NHTQEVCGL-KW-SPDGRYLASGGND 439 (609)
Q Consensus 410 ~~~~~~-~h~~~V~~l-~~-spdg~~lasgs~D 439 (609)
-..+. .......+. +. .-++++.+.|+.+
T Consensus 97 -W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~ 128 (346)
T TIGR03547 97 -WQKLDTRSPVGLLGASGFSLHNGQAYFTGGVN 128 (346)
T ss_pred -EecCCCCCCCcccceeEEEEeCCEEEEEcCcC
Confidence 11111 111111111 11 3467788888764
No 452
>KOG4659|consensus
Probab=88.27 E-value=68 Score=38.81 Aligned_cols=50 Identities=18% Similarity=0.023 Sum_probs=32.2
Q ss_pred CccccCCCccccccCCccCCceeEEEEEecCC--C-------eEEEEcCCeEEEEeCCC
Q psy4876 249 TSRYIPLTADRILDAPEIQNDYYLNLIDWSHF--N-------VLAVALGGSIYLWNGES 298 (609)
Q Consensus 249 ~~r~i~~~p~~il~ap~~~~~~~v~~l~wsp~--~-------lla~s~dg~I~iWd~~~ 298 (609)
..+++.+.|..+..+-+-.....|.|..+... + -||.+-||.++|=|.+-
T Consensus 327 ~n~~it~~Prvitt~mgdG~qR~veC~~C~G~a~~~~L~aPvala~a~DGSl~VGDfNy 385 (1899)
T KOG4659|consen 327 GNRLITEEPRVITTAMGDGHQRDVECPKCEGKADSISLFAPVALAYAPDGSLIVGDFNY 385 (1899)
T ss_pred cceEeecCCceEEEeccCcccccccCCCCCCccccceeeceeeEEEcCCCcEEEccchh
Confidence 35778888877776665555555666655431 1 34577799999877643
No 453
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=87.97 E-value=62 Score=37.97 Aligned_cols=164 Identities=18% Similarity=0.291 Sum_probs=99.5
Q ss_pred cCCCCeEEEEEc---c----CCCEEEEEeCCCcEEEEeCCCCCC---------CCCccceEeecC---CcccEEEEEEcC
Q psy4876 416 NHTQEVCGLKWS---P----DGRYLASGGNDNLLNIWSGVPGQH---------TFSTQPIHSLSR---HQAAVKAIAWCP 476 (609)
Q Consensus 416 ~h~~~V~~l~~s---p----dg~~lasgs~Dg~I~iwd~~~~~~---------~~~~~~~~~~~~---h~~~V~~l~~sp 476 (609)
....+|..|+|. . ..++|++-. ...+.|+...-... .....++..+.. ...+..+++|+|
T Consensus 77 ~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt-~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP 155 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESFDEKSRWLAVRT-ETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNP 155 (765)
T ss_pred CCCCCeeEEEecccccccCCcCcEEEEEc-CCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEecc
Confidence 456788888887 2 224666655 46677777221110 111234444432 234678999999
Q ss_pred CCCcEEEEEeccCCCeEEEEECCCCc-----ee-------EEE--c--CCCCeEEEEEcCCCCeEEEEEecCCCeEEEEE
Q psy4876 477 WSPNVLASGGGTADRHIYFWNVSSGA-----CL-------DSI--D--TKSQVCALLWNSDYKELVSAHGFAQNQLIIWK 540 (609)
Q Consensus 477 ~~~~llasggGs~Dg~I~iwd~~t~~-----~~-------~~~--~--~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd 540 (609)
+...-||+- ...|...|||+.... .+ ..+ + ..+....+.|..+...|+++ ....+.++|
T Consensus 156 ~~~~q~AiV--D~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~---~r~~l~~~d 230 (765)
T PF10214_consen 156 WDQRQFAIV--DEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVC---NRSKLMLID 230 (765)
T ss_pred CccceEEEE--eccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEE---cCCceEEEE
Confidence 887777766 478999999992111 11 111 0 11345588999888888875 478899999
Q ss_pred CCCCceEE--EEeCCCCCEEEEEEeCCCC-EEEEEECCCCEEEEEcCCC
Q psy4876 541 YPSLVKVA--ELHGHSARVLNLAMSPDET-TVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 541 ~~~~~~~~--~l~~h~~~V~~l~~spdg~-~L~s~s~Dg~I~iWdl~~~ 586 (609)
+.+..... .......+|.++.-+++.. +++.-+ ...|...++...
T Consensus 231 ~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLT-s~eiiw~~~~~~ 278 (765)
T PF10214_consen 231 FESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILT-SKEIIWLDVKSS 278 (765)
T ss_pred CCCCCccchhccCCChhheeeEEecCCccceEEEEe-cCeEEEEEccCC
Confidence 98776533 1233457899999888722 222222 246777777764
No 454
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=87.68 E-value=3.1 Score=40.53 Aligned_cols=73 Identities=15% Similarity=0.278 Sum_probs=48.9
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeec--------CCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEE
Q psy4876 426 WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS--------RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWN 497 (609)
Q Consensus 426 ~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~--------~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd 497 (609)
+..++.+|++.+.+|.+++||+.+++.......+..+- .....|..+.+..+|.-++.. .+|..+.||
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l----sng~~y~y~ 93 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL----SNGDSYSYS 93 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE----eCCCEEEec
Confidence 44568899999999999999999886443321221111 345678888888777544433 367788888
Q ss_pred CCCCc
Q psy4876 498 VSSGA 502 (609)
Q Consensus 498 ~~t~~ 502 (609)
..-+.
T Consensus 94 ~~L~~ 98 (219)
T PF07569_consen 94 PDLGC 98 (219)
T ss_pred cccce
Confidence 76544
No 455
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=87.36 E-value=8.6 Score=41.16 Aligned_cols=90 Identities=13% Similarity=0.082 Sum_probs=58.4
Q ss_pred EEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEE-EE-cCCC------------
Q psy4876 413 LLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI-AW-CPWS------------ 478 (609)
Q Consensus 413 ~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l-~~-sp~~------------ 478 (609)
.+......+.+|+.+|++++.|+..+=|.|.++|+..+ ..++.+++..++-..- .. ....
T Consensus 302 ~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~------~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~ 375 (415)
T PF14655_consen 302 GLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARG------IVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSS 375 (415)
T ss_pred eeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCC------hhhhhhccCccceEEEEEeecccccccccccccCCC
Confidence 34445567889999999999999888899999999988 5555555544321110 00 0100
Q ss_pred ---CcEEEEEeccCCCeEEEEECCCCceeEEEcC
Q psy4876 479 ---PNVLASGGGTADRHIYFWNVSSGACLDSIDT 509 (609)
Q Consensus 479 ---~~llasggGs~Dg~I~iwd~~t~~~~~~~~~ 509 (609)
..+|+.-. -.-|.|.||.+++|..+..+..
T Consensus 376 ~~~~l~LvIya-prRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 376 SRFALFLVIYA-PRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred CcceEEEEEEe-ccCCeEEEEecCCCCEEEEEEe
Confidence 11222221 3678999999999887776643
No 456
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=87.35 E-value=46 Score=35.79 Aligned_cols=220 Identities=11% Similarity=0.109 Sum_probs=114.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCe-----eEEEecCCCCceEEEEec------CCEEEEEecCCeEEEEEcCCCC-------
Q psy4876 347 GYMLGVGTSLGTVQLWDVSAKK-----KCRTMDGHDVRVGALAWN------TYILSSGSRCGNIVHHDVRSRD------- 408 (609)
Q Consensus 347 g~~Lasgs~dg~I~iwd~~~~~-----~~~~l~~h~~~V~~l~~~------~~~L~sgs~dg~I~iwd~~~~~------- 408 (609)
...|++|+..|.++||+...+. .+-+. .-..+|..+... ....++.-.-..+.+|.+....
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~-~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLET-QLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEE-ecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence 3789999999999999986433 11111 244677777661 2223333444567777663211
Q ss_pred -eeEEEEccCC--CCeEEEEEcc----C-CCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCc
Q psy4876 409 -HKVALLQNHT--QEVCGLKWSP----D-GRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPN 480 (609)
Q Consensus 409 -~~~~~~~~h~--~~V~~l~~sp----d-g~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 480 (609)
..+..+..|. .....+++-| . ..+|++-+.||.+.+|+-+.. ...+.+.. .--...+++++..+.
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~------~f~~~lp~-~llPgPl~Y~~~tDs 188 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESF------AFSRFLPD-FLLPGPLCYCPRTDS 188 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcE------EEEEEcCC-CCCCcCeEEeecCCE
Confidence 1222333332 2334444444 2 357888999999999997754 22222222 222245677776655
Q ss_pred EEEEEeccCCCeEEEEECCC--------------------Cc---eeEEEcCCCCeEEEE---EcCCCCeEEEEEecCCC
Q psy4876 481 VLASGGGTADRHIYFWNVSS--------------------GA---CLDSIDTKSQVCALL---WNSDYKELVSAHGFAQN 534 (609)
Q Consensus 481 llasggGs~Dg~I~iwd~~t--------------------~~---~~~~~~~~~~v~sl~---~s~~g~~l~~~sG~~dg 534 (609)
++++. .+..|..|.... ++ ...++..+..+..+. ++.....+++.+ ..
T Consensus 189 fvt~s---ss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLg---er 262 (418)
T PF14727_consen 189 FVTAS---SSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLG---ER 262 (418)
T ss_pred EEEec---CceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEe---cc
Confidence 55543 566777776421 11 112233334443333 333334444442 56
Q ss_pred eEEEEECCCCceEEEEeCCCCCEEEEE-Ee----CCC---CEEEEEECCCCEEEEE
Q psy4876 535 QLIIWKYPSLVKVAELHGHSARVLNLA-MS----PDE---TTVLSAGADETLRLWK 582 (609)
Q Consensus 535 ~I~Iwd~~~~~~~~~l~~h~~~V~~l~-~s----pdg---~~L~s~s~Dg~I~iWd 582 (609)
.+.+.+. +|......+ ......+++ |. .++ ..++.++.++++.||.
T Consensus 263 ~Lf~l~~-~G~l~~~kr-Ld~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~ 316 (418)
T PF14727_consen 263 SLFCLKD-NGSLRFQKR-LDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYE 316 (418)
T ss_pred eEEEEcC-CCeEEEEEe-cCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEe
Confidence 6777765 443333222 222222222 21 122 2488888899888775
No 457
>PLN02153 epithiospecifier protein
Probab=87.29 E-value=40 Score=35.06 Aligned_cols=62 Identities=10% Similarity=0.054 Sum_probs=33.6
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeE--EEecC---CCCc--eEEEEecCCEEEEEecC-----------CeEEEE
Q psy4876 346 EGYMLGVGTSL-----GTVQLWDVSAKKKC--RTMDG---HDVR--VGALAWNTYILSSGSRC-----------GNIVHH 402 (609)
Q Consensus 346 dg~~Lasgs~d-----g~I~iwd~~~~~~~--~~l~~---h~~~--V~~l~~~~~~L~sgs~d-----------g~I~iw 402 (609)
++++++.|+.+ ..+.+||..+.+-. ..+.. ...+ -..+..++.+++.|+.+ ..|.+|
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~y 164 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAY 164 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEE
Confidence 45666667643 25788998775432 22210 1111 12233367777777754 247788
Q ss_pred EcCCC
Q psy4876 403 DVRSR 407 (609)
Q Consensus 403 d~~~~ 407 (609)
|..+.
T Consensus 165 d~~~~ 169 (341)
T PLN02153 165 NIADG 169 (341)
T ss_pred ECCCC
Confidence 88764
No 458
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=87.23 E-value=39 Score=34.84 Aligned_cols=114 Identities=11% Similarity=0.170 Sum_probs=54.5
Q ss_pred EEEEecCCEEEEEecCC-----eEEEEEcCCCCee--EEEEccCCCCe--EEEEEccCCCEEEEEeC-----CCcEEEEe
Q psy4876 381 GALAWNTYILSSGSRCG-----NIVHHDVRSRDHK--VALLQNHTQEV--CGLKWSPDGRYLASGGN-----DNLLNIWS 446 (609)
Q Consensus 381 ~~l~~~~~~L~sgs~dg-----~I~iwd~~~~~~~--~~~~~~h~~~V--~~l~~spdg~~lasgs~-----Dg~I~iwd 446 (609)
..+..++.+++.|+.++ .+..+|+.+.... ...+..-.... .+++. -++.+.+.|+. ...+..||
T Consensus 67 ~~~~~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd 145 (323)
T TIGR03548 67 ASVSVENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFN 145 (323)
T ss_pred EEEEECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEc
Confidence 34455777778887643 4667777664321 11211111111 12222 25667777764 24688889
Q ss_pred CCCCCCCCCccceEeecCC-cccEEEEEEcCCCCcEEEEEeccCC--CeEEEEECCCCc
Q psy4876 447 GVPGQHTFSTQPIHSLSRH-QAAVKAIAWCPWSPNVLASGGGTAD--RHIYFWNVSSGA 502 (609)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~llasggGs~D--g~I~iwd~~t~~ 502 (609)
+.+.+- ..+..+... .....++.. +..+++.||.... ..+.+||..+.+
T Consensus 146 ~~~~~W----~~~~~~p~~~r~~~~~~~~---~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 146 LETQEW----FELPDFPGEPRVQPVCVKL---QNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred CCCCCe----eECCCCCCCCCCcceEEEE---CCEEEEEcCCCCccccceEEEecCCCe
Confidence 886532 122111111 111111222 3467777752111 235688887654
No 459
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=87.15 E-value=46 Score=35.60 Aligned_cols=145 Identities=14% Similarity=0.184 Sum_probs=81.3
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCC
Q psy4876 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t 500 (609)
...+..++||.+++++.....++-||--.. .-...-......+.++.|.+++. +++++ .+|.+.+ ....
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~------~W~~~~~~~~~~l~~v~~~~dg~-l~l~g---~~G~l~~-S~d~ 309 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQP------YWQPHNRASARRIQNMGWRADGG-LWLLT---RGGGLYV-SKGT 309 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCc------ceEEecCCCccceeeeeEcCCCC-EEEEe---CCceEEE-ecCC
Confidence 455667788888887765444444543211 00111122345688999998875 44444 4566543 3344
Q ss_pred Cc-----eeEEEcCC---CCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEe---CCCCCEEEEEEeCCCCEE
Q psy4876 501 GA-----CLDSIDTK---SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELH---GHSARVLNLAMSPDETTV 569 (609)
Q Consensus 501 ~~-----~~~~~~~~---~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~---~h~~~V~~l~~spdg~~L 569 (609)
+. ........ ..+.++.|.+++..+++ | ..|.+.... ..++.-.... .-......+.|.++++.+
T Consensus 310 G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~--G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~ 385 (398)
T PLN00033 310 GLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAA--G-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGF 385 (398)
T ss_pred CCcccccceeecccCCCCcceEEEEEcCCCcEEEE--E-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceE
Confidence 43 22333222 35889999988887776 4 567666553 3333222222 224567899987776655
Q ss_pred EEEECCCCEEEE
Q psy4876 570 LSAGADETLRLW 581 (609)
Q Consensus 570 ~s~s~Dg~I~iW 581 (609)
++ +.+|.|.-|
T Consensus 386 ~~-G~~G~il~~ 396 (398)
T PLN00033 386 VL-GNDGVLLRY 396 (398)
T ss_pred EE-eCCcEEEEe
Confidence 54 467776544
No 460
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=86.72 E-value=3.1 Score=28.99 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=25.7
Q ss_pred ccEEEEEEcCCCC--cEEEEEeccCCCeEEEEECCC
Q psy4876 467 AAVKAIAWCPWSP--NVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 467 ~~V~~l~~sp~~~--~llasggGs~Dg~I~iwd~~t 500 (609)
++|.++.|+|... .||+... .-+.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E--~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAE--HQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEc--cCCeEEEEEccc
Confidence 4689999997654 6777763 679999999995
No 461
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=86.25 E-value=23 Score=31.36 Aligned_cols=108 Identities=16% Similarity=0.211 Sum_probs=64.2
Q ss_pred EecC--CEEEEEecCCeEEEEEcCCCC-------eeEEEEccCCCCeEEEEEcc-----CCCEEEEEeCCCcEEEEeCCC
Q psy4876 384 AWNT--YILSSGSRCGNIVHHDVRSRD-------HKVALLQNHTQEVCGLKWSP-----DGRYLASGGNDNLLNIWSGVP 449 (609)
Q Consensus 384 ~~~~--~~L~sgs~dg~I~iwd~~~~~-------~~~~~~~~h~~~V~~l~~sp-----dg~~lasgs~Dg~I~iwd~~~ 449 (609)
.|+| ..|++++.-|.|.|++..... ..+..+. -...|++|+-.+ +...|+.|+. ..|..||+..
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~ 82 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVEN 82 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEccc
Confidence 4543 467788888999999876432 1233333 456777776544 3456777775 6799999987
Q ss_pred CCCCCCccceEeecCCcccEEEEEEcC---CCCcEEEEEeccCCCeEEEEECCCCce
Q psy4876 450 GQHTFSTQPIHSLSRHQAAVKAIAWCP---WSPNVLASGGGTADRHIYFWNVSSGAC 503 (609)
Q Consensus 450 ~~~~~~~~~~~~~~~h~~~V~~l~~sp---~~~~llasggGs~Dg~I~iwd~~t~~~ 503 (609)
... +.. +.-...|.++.+-. ....++++|| +..|.-||..-.+.
T Consensus 83 N~d------~Fy-ke~~DGvn~i~~g~~~~~~~~l~ivGG---ncsi~Gfd~~G~e~ 129 (136)
T PF14781_consen 83 NSD------LFY-KEVPDGVNAIVIGKLGDIPSPLVIVGG---NCSIQGFDYEGNEI 129 (136)
T ss_pred Cch------hhh-hhCccceeEEEEEecCCCCCcEEEECc---eEEEEEeCCCCcEE
Confidence 632 211 12235566666632 2235677764 66676666554433
No 462
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=86.19 E-value=24 Score=31.34 Aligned_cols=118 Identities=15% Similarity=0.084 Sum_probs=71.5
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCCCCC--CccceEeecCCcccEEEEEEcC----CCCcEEEEEeccCCCeEEEEE
Q psy4876 424 LKWSPDGRYLASGGNDNLLNIWSGVPGQHTF--STQPIHSLSRHQAAVKAIAWCP----WSPNVLASGGGTADRHIYFWN 497 (609)
Q Consensus 424 l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~--~~~~~~~~~~h~~~V~~l~~sp----~~~~llasggGs~Dg~I~iwd 497 (609)
-.|.....-|+.++.-|.|.|++........ ....+..+. -...|++|+-.+ ++..+|+.| ....|..||
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliG---t~t~llaYD 79 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIG---TQTSLLAYD 79 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEe---ccceEEEEE
Confidence 3555555578888888999999876542111 112333333 345677776554 345677777 588999999
Q ss_pred CCCCceeEEEcCCCCeEEEEEcCC---CCeEEEEEecCCCeEEEEECCCCceE
Q psy4876 498 VSSGACLDSIDTKSQVCALLWNSD---YKELVSAHGFAQNQLIIWKYPSLVKV 547 (609)
Q Consensus 498 ~~t~~~~~~~~~~~~v~sl~~s~~---g~~l~~~sG~~dg~I~Iwd~~~~~~~ 547 (609)
+.....+...+....+.++.+-.- ...++.+ | .+-.|.-||..-.+..
T Consensus 80 V~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~iv-G-Gncsi~Gfd~~G~e~f 130 (136)
T PF14781_consen 80 VENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIV-G-GNCSIQGFDYEGNEIF 130 (136)
T ss_pred cccCchhhhhhCccceeEEEEEecCCCCCcEEEE-C-ceEEEEEeCCCCcEEE
Confidence 998877666666677777776432 2233333 2 2455666665444433
No 463
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=86.01 E-value=3.2 Score=28.12 Aligned_cols=41 Identities=5% Similarity=0.116 Sum_probs=31.5
Q ss_pred CCCCcEEEEEeccCCCeEEEEECCCCceeEEEcCCCCeEEEEE
Q psy4876 476 PWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLW 518 (609)
Q Consensus 476 p~~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~ 518 (609)
|+++.++++.. .++.|.++|..+++.+..+........++|
T Consensus 1 pd~~~lyv~~~--~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNS--GSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeC--CCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 56777777763 689999999999998888877655555555
No 464
>PLN02193 nitrile-specifier protein
Probab=85.55 E-value=32 Score=37.67 Aligned_cols=101 Identities=9% Similarity=0.037 Sum_probs=53.6
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeEE--Eec---CCCCceEEEEecCCEEEEEecCC-----eEEEEEcCCCCee
Q psy4876 346 EGYMLGVGTSL-----GTVQLWDVSAKKKCR--TMD---GHDVRVGALAWNTYILSSGSRCG-----NIVHHDVRSRDHK 410 (609)
Q Consensus 346 dg~~Lasgs~d-----g~I~iwd~~~~~~~~--~l~---~h~~~V~~l~~~~~~L~sgs~dg-----~I~iwd~~~~~~~ 410 (609)
++.+.+.|+.+ ..+.+||+.+.+-.. .+. ........+..++.+++.|+.++ .+..||+.+..
T Consensus 228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~-- 305 (470)
T PLN02193 228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKK-- 305 (470)
T ss_pred CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCE--
Confidence 45566666654 358889988754322 111 01111223344677777777643 46678877642
Q ss_pred EEEEcc------CCCCeEEEEEccCCCEEEEEeCC----CcEEEEeCCCC
Q psy4876 411 VALLQN------HTQEVCGLKWSPDGRYLASGGND----NLLNIWSGVPG 450 (609)
Q Consensus 411 ~~~~~~------h~~~V~~l~~spdg~~lasgs~D----g~I~iwd~~~~ 450 (609)
-..+.. ..... .++. -++++++.++.+ ..|.+||+.+.
T Consensus 306 W~~~~~~~~~~~~R~~~-~~~~-~~gkiyviGG~~g~~~~dv~~yD~~t~ 353 (470)
T PLN02193 306 WFHCSTPGDSFSIRGGA-GLEV-VQGKVWVVYGFNGCEVDDVHYYDPVQD 353 (470)
T ss_pred EEeCCCCCCCCCCCCCc-EEEE-ECCcEEEEECCCCCccCceEEEECCCC
Confidence 111111 11111 1222 256777777755 46899998875
No 465
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=85.54 E-value=3.3 Score=28.84 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=26.3
Q ss_pred CCeEEEEEccC-C--CEEEEEeCCCeEEEEeCCC
Q psy4876 336 ENVCSVAWIQE-G--YMLGVGTSLGTVQLWDVSA 366 (609)
Q Consensus 336 ~~V~~v~~spd-g--~~Lasgs~dg~I~iwd~~~ 366 (609)
+.|.++.|+|+ + ++|+.+-..|.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 46889999985 3 6888888889999999985
No 466
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=85.19 E-value=8.3 Score=40.84 Aligned_cols=159 Identities=15% Similarity=0.085 Sum_probs=95.5
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCeeE-EEecCC-CC----ceE-EEE--ecCCEEEEEecCCeEEEE-E
Q psy4876 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKC-RTMDGH-DV----RVG-ALA--WNTYILSSGSRCGNIVHH-D 403 (609)
Q Consensus 334 h~~~V~~v~~spdg~~Lasgs~dg~I~iwd~~~~~~~-~~l~~h-~~----~V~-~l~--~~~~~L~sgs~dg~I~iw-d 403 (609)
.-..|..+-..|||+.|++-+. .++.|+++.+.... +.+-.. .+ .|+ .+. -.+.-|..++.||.|.-| |
T Consensus 219 ~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFd 297 (733)
T COG4590 219 PFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFD 297 (733)
T ss_pred CccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeee
Confidence 4466778889999999888766 67899988764321 111111 11 122 111 135678888999998877 6
Q ss_pred cCCCCee----EEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCC
Q psy4876 404 VRSRDHK----VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSP 479 (609)
Q Consensus 404 ~~~~~~~----~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 479 (609)
++..... ++.++-...++.-+.-..+.+-+++-+..|++.++..... +++ -+..-...+.-++++|++.
T Consensus 298 vr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~------~~l-L~~~~~~~~~~~~~Sp~~~ 370 (733)
T COG4590 298 VRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSE------KLL-LFERAYQAPQLVAMSPNQA 370 (733)
T ss_pred eecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccC------cce-ehhhhhcCcceeeeCcccc
Confidence 6554321 2222222344443333334456777788888887765443 222 2222223567789999998
Q ss_pred cEEEEEeccCCCeEEEEECCCCcee
Q psy4876 480 NVLASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 480 ~llasggGs~Dg~I~iwd~~t~~~~ 504 (609)
.++.- ..|.|+++.+++..+.
T Consensus 371 ~Ll~e----~~gki~~~~l~Nr~Pe 391 (733)
T COG4590 371 YLLSE----DQGKIRLAQLENRNPE 391 (733)
T ss_pred hheee----cCCceEEEEecCCCCC
Confidence 77763 5789999998865543
No 467
>KOG4460|consensus
Probab=85.11 E-value=23 Score=38.36 Aligned_cols=34 Identities=15% Similarity=0.303 Sum_probs=25.2
Q ss_pred CEEEEEEeCCC---CEEEEEECCCCEEEEEcCCCccc
Q psy4876 556 RVLNLAMSPDE---TTVLSAGADETLRLWKIFEKVKS 589 (609)
Q Consensus 556 ~V~~l~~spdg---~~L~s~s~Dg~I~iWdl~~~~~~ 589 (609)
.+..++|+|+. ..|..-+.|++||+|++......
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence 46677888864 57777788888888888766544
No 468
>KOG1900|consensus
Probab=84.80 E-value=8.8 Score=45.85 Aligned_cols=140 Identities=13% Similarity=0.172 Sum_probs=86.6
Q ss_pred eCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEE--------EcCCCCcEEEEEeccCCCeEEEEECC----CCcee
Q psy4876 437 GNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA--------WCPWSPNVLASGGGTADRHIYFWNVS----SGACL 504 (609)
Q Consensus 437 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~--------~sp~~~~llasggGs~Dg~I~iwd~~----t~~~~ 504 (609)
+.|+.+.+|+.+++ .....+.+-...|..|. |-|.=+++|+.+ .--.|.++-+. ++..-
T Consensus 96 TiDn~L~lWny~~~------~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvva---T~~ei~ilgV~~~~~~~~~~ 166 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESD------NELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVA---TPVEIVILGVSFDEFTGELS 166 (1311)
T ss_pred EeCCeEEEEEcCCC------CccccccchhhhheeeeeecCCCCcchhhhheeEEec---ccceEEEEEEEeccccCccc
Confidence 45789999999986 33444444444454443 334445666665 34555555332 22111
Q ss_pred -----EEEcC-CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC--C------ce--------------EEEEe-CCCC
Q psy4876 505 -----DSIDT-KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS--L------VK--------------VAELH-GHSA 555 (609)
Q Consensus 505 -----~~~~~-~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~--~------~~--------------~~~l~-~h~~ 555 (609)
.++.. +..|.++....+|+.+++ | .||.|+=+-+.. + .+ +..+. .+.+
T Consensus 167 ~f~~~~~i~~dg~~V~~I~~t~nGRIF~~--G-~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~d 243 (1311)
T KOG1900|consen 167 IFNTSFKISVDGVSVNCITYTENGRIFFA--G-RDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKD 243 (1311)
T ss_pred ccccceeeecCCceEEEEEeccCCcEEEe--e-cCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCC
Confidence 12222 347889998888988887 4 566444322221 1 00 11223 4677
Q ss_pred CEEEEEEeCCCCEEEEEECCCCEEEEEcCCCcc
Q psy4876 556 RVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588 (609)
Q Consensus 556 ~V~~l~~spdg~~L~s~s~Dg~I~iWdl~~~~~ 588 (609)
+|..++.......+.+-+..|+|.+|++.....
T Consensus 244 pI~qi~ID~SR~IlY~lsek~~v~~Y~i~~~G~ 276 (1311)
T KOG1900|consen 244 PIRQITIDNSRNILYVLSEKGTVSAYDIGGNGL 276 (1311)
T ss_pred cceeeEeccccceeeeeccCceEEEEEccCCCc
Confidence 999999988888999999999999999988443
No 469
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=84.63 E-value=51 Score=33.79 Aligned_cols=233 Identities=13% Similarity=-0.002 Sum_probs=117.1
Q ss_pred eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEe-CCCeEE
Q psy4876 282 VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGT-SLGTVQ 360 (609)
Q Consensus 282 lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs-~dg~I~ 360 (609)
.+..|.+..|++.+... .. .....+-+...|+++...+.-+.|++-+ ....++
T Consensus 15 ~lL~GTe~Gly~~~~~~-------------------------~~-~~~~kl~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~ 68 (302)
T smart00036 15 WLLVGTEEGLYVLNISD-------------------------QP-GTLEKLIGRRSVTQIWVLEENNVLLMISGKKPQLY 68 (302)
T ss_pred EEEEEeCCceEEEEccc-------------------------CC-CCeEEecCcCceEEEEEEhhhCEEEEEeCCcceEE
Confidence 66777777777777654 11 1222222567899999998877666544 334599
Q ss_pred EEeCCCCee---------------EEEecCCCCceEEEEe-cC--CEEEEEecCCeEEEEEcCCCCeeEEEEc-------
Q psy4876 361 LWDVSAKKK---------------CRTMDGHDVRVGALAW-NT--YILSSGSRCGNIVHHDVRSRDHKVALLQ------- 415 (609)
Q Consensus 361 iwd~~~~~~---------------~~~l~~h~~~V~~l~~-~~--~~L~sgs~dg~I~iwd~~~~~~~~~~~~------- 415 (609)
++++..-.. ....-+|......+.. .+ ..++++....+|.++......+....+.
T Consensus 69 ~~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~ 148 (302)
T smart00036 69 SHPLSALVEKKEALGSARLVIRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPL 148 (302)
T ss_pred EEEHHHhhhhhhccCCccccccccceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccC
Confidence 999842211 0112233333333333 22 2344445556677664433211111111
Q ss_pred cCCCCeEEEEEccC--CCEEEEEeCCCcEEEEeCCC--CCCCCCccceEeecCCc-ccEEEEEEcCCCCcEEEEEeccCC
Q psy4876 416 NHTQEVCGLKWSPD--GRYLASGGNDNLLNIWSGVP--GQHTFSTQPIHSLSRHQ-AAVKAIAWCPWSPNVLASGGGTAD 490 (609)
Q Consensus 416 ~h~~~V~~l~~spd--g~~lasgs~Dg~I~iwd~~~--~~~~~~~~~~~~~~~h~-~~V~~l~~sp~~~~llasggGs~D 490 (609)
.-..++..+..+++ ...+..|+..+...++++.. ... .....-....... .++....... + .++++ .|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~lcvG~~~~~~~~~~~~~~~~~~-~d~sl~~~~~~~~~~p~~i~~l~~-~-e~Llc----~~ 221 (302)
T smart00036 149 ISPVPVFVELVSSSFERPGICIGSDKGGGDVVQFHESLVSK-EDLSLPFLSEETSLKPISVVQVPR-D-EFLLC----YD 221 (302)
T ss_pred CCCccceEeeecccccceEEEEEEcCCCCeEEEEeeccccc-ccccccccccccccCceEEEEECC-C-eEEEE----EC
Confidence 01123333333333 45677777643345555543 110 0000000011111 3444444433 4 34443 46
Q ss_pred CeEEEEECCCCce--eEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeC
Q psy4876 491 RHIYFWNVSSGAC--LDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG 552 (609)
Q Consensus 491 g~I~iwd~~t~~~--~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~ 552 (609)
....+-|...... ...+.-...+.++++.. .++++. .++.|.|+++.+++.+.++..
T Consensus 222 ~~~v~Vn~~G~~~~r~~~l~w~~~p~~~~~~~--pyll~~---~~~~ievr~l~~~~l~q~i~~ 280 (302)
T smart00036 222 EFGVFVNLYGKRRSRNPILHWEFMPESFAYHS--PYLLAF---HDNGIEIRSIKTGELLQELAD 280 (302)
T ss_pred cEEEEEeCCCCccccceEEEcCCcccEEEEEC--CEEEEE---cCCcEEEEECCCCceEEEEec
Confidence 7777777653122 22344455667777763 566654 477899999999998888763
No 470
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=83.73 E-value=63 Score=34.18 Aligned_cols=186 Identities=14% Similarity=0.175 Sum_probs=104.7
Q ss_pred CEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEcc----CCCE--EEEEeC-C---CcEEEEeCCCCCCCCCcc
Q psy4876 388 YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP----DGRY--LASGGN-D---NLLNIWSGVPGQHTFSTQ 457 (609)
Q Consensus 388 ~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~sp----dg~~--lasgs~-D---g~I~iwd~~~~~~~~~~~ 457 (609)
.+++....++-+.+||+... .++.+. .+.++.+..-. .|+. ||++++ + ..|++|.+.... .
T Consensus 69 SlIigTdK~~GL~VYdL~Gk--~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~-----g 139 (381)
T PF02333_consen 69 SLIIGTDKKGGLYVYDLDGK--ELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDT-----G 139 (381)
T ss_dssp -EEEEEETTTEEEEEETTS---EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTT-----T
T ss_pred ceEEEEeCCCCEEEEcCCCc--EEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCC-----C
Confidence 56777778888999999864 455543 23444444321 3433 444443 2 468999776321 1
Q ss_pred ceEeecC-------CcccEEEEEE--cCC-CCcEEEEEeccCCCeEEEEECC---CC----ceeEEEcCCCCeEEEEEcC
Q psy4876 458 PIHSLSR-------HQAAVKAIAW--CPW-SPNVLASGGGTADRHIYFWNVS---SG----ACLDSIDTKSQVCALLWNS 520 (609)
Q Consensus 458 ~~~~~~~-------h~~~V~~l~~--sp~-~~~llasggGs~Dg~I~iwd~~---t~----~~~~~~~~~~~v~sl~~s~ 520 (609)
.+..+.. ....+..+|+ ++. |...++.. ..+|.+..|-+. .+ +.++.+...+++..|....
T Consensus 140 ~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~--~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDD 217 (381)
T PF02333_consen 140 ELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVN--GKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDD 217 (381)
T ss_dssp EEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEE--ETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEET
T ss_pred cceEcCCCCcccccccccceeeEEeecCCCCcEEEEEe--cCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEec
Confidence 2222211 1234666776 343 43333333 378988887764 33 3678888889999999999
Q ss_pred CCCeEEEEEecCCCeEEEEECC-----CCceEEEEeC--CCCCEEEEEEe--CCCC-EE-EEEECCCCEEEEEcCCC
Q psy4876 521 DYKELVSAHGFAQNQLIIWKYP-----SLVKVAELHG--HSARVLNLAMS--PDET-TV-LSAGADETLRLWKIFEK 586 (609)
Q Consensus 521 ~g~~l~~~sG~~dg~I~Iwd~~-----~~~~~~~l~~--h~~~V~~l~~s--pdg~-~L-~s~s~Dg~I~iWdl~~~ 586 (609)
....|+. |.++.-|.-|+.. .+..+....+ ....|..|++- .+++ || +|.-.+++..||+....
T Consensus 218 e~g~LYv--gEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 218 ETGRLYV--GEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp TTTEEEE--EETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred ccCCEEE--ecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 9999999 5577666666664 1223333322 34567888774 3443 44 44445789999998764
No 471
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=83.61 E-value=64 Score=34.13 Aligned_cols=51 Identities=14% Similarity=0.031 Sum_probs=26.9
Q ss_pred CCCEEEEEeCC-----------CeEEEEeCCCCeeEEEec--CCC-CceEEEE-ecCCEEEEEecC
Q psy4876 346 EGYMLGVGTSL-----------GTVQLWDVSAKKKCRTMD--GHD-VRVGALA-WNTYILSSGSRC 396 (609)
Q Consensus 346 dg~~Lasgs~d-----------g~I~iwd~~~~~~~~~l~--~h~-~~V~~l~-~~~~~L~sgs~d 396 (609)
++.+.+.|+.+ ..+..||..+.+-...-. ... .....+. .++++.+.|+.+
T Consensus 84 ~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 84 DGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQKLDTRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred CCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEEEeCCCCCCCcccceEEEEeeCCEEEEECCCC
Confidence 45666666643 247788887654322211 111 1122333 477888888754
No 472
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=83.17 E-value=65 Score=33.91 Aligned_cols=159 Identities=13% Similarity=0.153 Sum_probs=81.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCC-c-eEEEEecCCEEEEEecCCeEEEEEcCCCCeeEEEEccC---CCC
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDV-R-VGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNH---TQE 420 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~-~-V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h---~~~ 420 (609)
+|+ |++++.+|.+..+|..+|+.+........ . ..........+..++.+|.+...|..++. ........ ...
T Consensus 111 ~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~-~~W~~~~~~~~~~~ 188 (370)
T COG1520 111 DGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDGTVYVGTDDGHLYALNADTGT-LKWTYETPAPLSLS 188 (370)
T ss_pred CCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCcEEEEecCCCeEEEEEccCCc-EEEEEecCCccccc
Confidence 666 66788899999999988988887776551 1 11111133445555577888888888764 33332211 111
Q ss_pred eEEEEEccCCCEEEEEeC--CCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEE---eccCCCeEEE
Q psy4876 421 VCGLKWSPDGRYLASGGN--DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASG---GGTADRHIYF 495 (609)
Q Consensus 421 V~~l~~spdg~~lasgs~--Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasg---gGs~Dg~I~i 495 (609)
+..-....++ .+..+.. ++.+.-.|..++...+........ +.. .+....... ...+.+.+ .++.++.+..
T Consensus 189 ~~~~~~~~~~-~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~~~~-~~~-~~~~~~~~~-~~~v~v~~~~~~~~~~g~~~~ 264 (370)
T COG1520 189 IYGSPAIASG-TVYVGSDGYDGILYALNAEDGTLKWSQKVSQTI-GRT-AISTTPAVD-GGPVYVDGGVYAGSYGGKLLC 264 (370)
T ss_pred cccCceeecc-eEEEecCCCcceEEEEEccCCcEeeeeeeeccc-Ccc-ccccccccc-CceEEECCcEEEEecCCeEEE
Confidence 1111112233 3444444 556777777777432221111111 111 010000000 11111110 0236788999
Q ss_pred EECCCCceeEEEcCC
Q psy4876 496 WNVSSGACLDSIDTK 510 (609)
Q Consensus 496 wd~~t~~~~~~~~~~ 510 (609)
.|..+|+.+-.+...
T Consensus 265 l~~~~G~~~W~~~~~ 279 (370)
T COG1520 265 LDADTGELIWSFPAG 279 (370)
T ss_pred EEcCCCceEEEEecc
Confidence 999999988887764
No 473
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=83.15 E-value=57 Score=33.23 Aligned_cols=223 Identities=17% Similarity=0.142 Sum_probs=117.2
Q ss_pred CccCCceeEEEEEecCCC--eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeec------CC
Q psy4876 264 PEIQNDYYLNLIDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE------GN 335 (609)
Q Consensus 264 p~~~~~~~v~~l~wsp~~--lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------h~ 335 (609)
|.+.+-|- |+++|.+ +++....+...+||........ -....+..+. ..
T Consensus 20 p~L~N~WG---ia~~p~~~~WVadngT~~~TlYdg~~~~~~g--------------------~~~~L~vtiP~~~~~~~~ 76 (336)
T TIGR03118 20 PGLRNAWG---LSYRPGGPFWVANTGTGTATLYVGNPDTQPL--------------------VQDPLVVVIPAPPPLAAE 76 (336)
T ss_pred ccccccce---eEecCCCCEEEecCCcceEEeecCCcccccC--------------------CccceEEEecCCCCCCCC
Confidence 44555554 8899987 5566666789999987210000 0111122222 23
Q ss_pred CCeEEEEEccCCC------------EEEEEeCCCeEEEEeCCCCee-----EEEec-CCCCce-EEEEe--c--CCEEEE
Q psy4876 336 ENVCSVAWIQEGY------------MLGVGTSLGTVQLWDVSAKKK-----CRTMD-GHDVRV-GALAW--N--TYILSS 392 (609)
Q Consensus 336 ~~V~~v~~spdg~------------~Lasgs~dg~I~iwd~~~~~~-----~~~l~-~h~~~V-~~l~~--~--~~~L~s 392 (609)
...+.+.|+.... .++.+++||+|.-|...-+.. ...+. .....| ..+++ + +.+|+.
T Consensus 77 ~~PTGiVfN~~~~F~vt~~g~~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYa 156 (336)
T TIGR03118 77 GTPTGQVFNGSDTFVVSGEGITGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYA 156 (336)
T ss_pred CCccEEEEeCCCceEEcCCCcccceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEE
Confidence 4677777764332 256688999999998533221 12222 112223 23444 2 344444
Q ss_pred E-ecCCeEEEEEcCCCCeeEEEEccCCCC-------------------eEEEEEccCCCEEEEEeCCCcEEEEeCCCCCC
Q psy4876 393 G-SRCGNIVHHDVRSRDHKVALLQNHTQE-------------------VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQH 452 (609)
Q Consensus 393 g-s~dg~I~iwd~~~~~~~~~~~~~h~~~-------------------V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~ 452 (609)
+ -..++|-|+|-.-. .+..-....++ |+-..-.+++..=+.|..-|.|-+||+..
T Consensus 157 adF~~g~IDVFd~~f~--~~~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G--- 231 (336)
T TIGR03118 157 ANFRQGRIDVFKGSFR--PPPLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNG--- 231 (336)
T ss_pred eccCCCceEEecCccc--cccCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCC---
Confidence 4 46788888876532 11110000110 11111112222222233347899999874
Q ss_pred CCCccceEeec--CCcccEEEEEEcCC-----CCcEEEEEeccCCCeEEEEECCCCceeEEEcCC-------CCeEEEEE
Q psy4876 453 TFSTQPIHSLS--RHQAAVKAIAWCPW-----SPNVLASGGGTADRHIYFWNVSSGACLDSIDTK-------SQVCALLW 518 (609)
Q Consensus 453 ~~~~~~~~~~~--~h~~~V~~l~~sp~-----~~~llasggGs~Dg~I~iwd~~t~~~~~~~~~~-------~~v~sl~~ 518 (609)
..++++. +.-..-+.|+..|. ...||+-- --||+|..||..+|+.+..+... ..++.|.|
T Consensus 232 ----~l~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGN--FGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~f 305 (336)
T TIGR03118 232 ----QLLRRVASSGRLNAPWGLAIAPESFGSLSGALLVGN--FGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTF 305 (336)
T ss_pred ----cEEEEeccCCcccCCceeeeChhhhCCCCCCeEEee--cCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeee
Confidence 4566553 22234456666552 23455543 34999999999999988777543 24677777
Q ss_pred cC
Q psy4876 519 NS 520 (609)
Q Consensus 519 s~ 520 (609)
..
T Consensus 306 Gn 307 (336)
T TIGR03118 306 GN 307 (336)
T ss_pred CC
Confidence 65
No 474
>PLN02193 nitrile-specifier protein
Probab=82.72 E-value=80 Score=34.61 Aligned_cols=102 Identities=10% Similarity=-0.016 Sum_probs=55.3
Q ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeeEEEec-----CCCCceEEEEecCCEEEEEecC----CeEEEEEcCCCCeeE
Q psy4876 346 EGYMLGVGTSLG-----TVQLWDVSAKKKCRTMD-----GHDVRVGALAWNTYILSSGSRC----GNIVHHDVRSRDHKV 411 (609)
Q Consensus 346 dg~~Lasgs~dg-----~I~iwd~~~~~~~~~l~-----~h~~~V~~l~~~~~~L~sgs~d----g~I~iwd~~~~~~~~ 411 (609)
++++++.|+.++ .+..||+.+.+-...-. ........+.+++.+++.++.+ ..+.+||+.+..-
T Consensus 278 ~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~~yD~~t~~W-- 355 (470)
T PLN02193 278 EENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKW-- 355 (470)
T ss_pred CCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEEECCcEEEEECCCCCccCceEEEECCCCEE--
Confidence 456666666543 46788887654322110 1112223344577888887765 3588999887531
Q ss_pred EEEccC-----CCCeEEEEEccCCCEEEEEeCC--------------CcEEEEeCCCC
Q psy4876 412 ALLQNH-----TQEVCGLKWSPDGRYLASGGND--------------NLLNIWSGVPG 450 (609)
Q Consensus 412 ~~~~~h-----~~~V~~l~~spdg~~lasgs~D--------------g~I~iwd~~~~ 450 (609)
..+... .....+++ .-++++++.|+.+ +.+.+||+.+.
T Consensus 356 ~~~~~~g~~P~~R~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~ 412 (470)
T PLN02193 356 TQVETFGVRPSERSVFASA-AVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETL 412 (470)
T ss_pred EEeccCCCCCCCcceeEEE-EECCEEEEECCccCCccccccCccceeccEEEEEcCcC
Confidence 222111 11112222 2256777777753 25788888765
No 475
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=82.65 E-value=14 Score=30.39 Aligned_cols=43 Identities=9% Similarity=0.003 Sum_probs=32.5
Q ss_pred cCCCeEEEEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEe
Q psy4876 488 TADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHG 530 (609)
Q Consensus 488 s~Dg~I~iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG 530 (609)
..+|.+..||..+++....++.-.-...++.++++..++++-.
T Consensus 34 ~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et 76 (89)
T PF03088_consen 34 RPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAET 76 (89)
T ss_dssp ---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEG
T ss_pred CCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEec
Confidence 4578999999999887666666667899999999999988743
No 476
>PLN02153 epithiospecifier protein
Probab=82.32 E-value=66 Score=33.40 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=14.8
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCC
Q psy4876 429 DGRYLASGGND-----NLLNIWSGVPG 450 (609)
Q Consensus 429 dg~~lasgs~D-----g~I~iwd~~~~ 450 (609)
++.+++.|+.+ ..+.+||+.+.
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~ 111 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKN 111 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCC
Confidence 46677777753 35788888764
No 477
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=82.04 E-value=72 Score=33.59 Aligned_cols=194 Identities=13% Similarity=0.008 Sum_probs=98.4
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEecCCC--CceEEEE-ecCCEEEEEecCCeEEEEEcCCCCeeEEEEccCC-CCeEEE
Q psy4876 349 MLGVGTSLGTVQLWDVSAKKKCRTMDGHD--VRVGALA-WNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHT-QEVCGL 424 (609)
Q Consensus 349 ~Lasgs~dg~I~iwd~~~~~~~~~l~~h~--~~V~~l~-~~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~-~~V~~l 424 (609)
.++++..+|.|.-.|.+++..+.....-. ..+..-. .....++.++.+|.++.+|.++++ .+....... -.+..-
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~-~~W~~~~~~~~~~~~~ 148 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGT-LVWSRNVGGSPYYASP 148 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCc-EEEEEecCCCeEEecC
Confidence 44556788888888888877554322111 1111111 123447788889988888987764 555555444 112222
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCc---ccEEEEEEcCCCCcEEEEEeccCCCeEEEEECCCC
Q psy4876 425 KWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ---AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG 501 (609)
Q Consensus 425 ~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~---~~V~~l~~sp~~~~llasggGs~Dg~I~iwd~~t~ 501 (609)
..-.++ .+..++.++.+...|..++. .+....... ..+..-.... ...+++...+. ++.+.-.|..+|
T Consensus 149 ~v~~~~-~v~~~s~~g~~~al~~~tG~------~~W~~~~~~~~~~~~~~~~~~~-~~~vy~~~~~~-~~~~~a~~~~~G 219 (370)
T COG1520 149 PVVGDG-TVYVGTDDGHLYALNADTGT------LKWTYETPAPLSLSIYGSPAIA-SGTVYVGSDGY-DGILYALNAEDG 219 (370)
T ss_pred cEEcCc-EEEEecCCCeEEEEEccCCc------EEEEEecCCccccccccCceee-cceEEEecCCC-cceEEEEEccCC
Confidence 222244 34444467888888888773 332221111 0010000011 22233322101 557888888888
Q ss_pred ceeEEEcCCCCeEE-----EEEcCCCCeEEE----EEecCCCeEEEEECCCCceEEEEeCC
Q psy4876 502 ACLDSIDTKSQVCA-----LLWNSDYKELVS----AHGFAQNQLIIWKYPSLVKVAELHGH 553 (609)
Q Consensus 502 ~~~~~~~~~~~v~s-----l~~s~~g~~l~~----~sG~~dg~I~Iwd~~~~~~~~~l~~h 553 (609)
...........+.. ..... +..+.+ ..+..++.+...+..+++.+..+...
T Consensus 220 ~~~w~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 220 TLKWSQKVSQTIGRTAISTTPAVD-GGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred cEeeeeeeecccCccccccccccc-CceEEECCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence 87766432211110 11111 111111 11345777888888888888777653
No 478
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=81.85 E-value=78 Score=33.88 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=66.1
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecC--CcccEEEEEEcCCCCcEEEEEeccCCCeEE
Q psy4876 417 HTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSR--HQAAVKAIAWCPWSPNVLASGGGTADRHIY 494 (609)
Q Consensus 417 h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~llasggGs~Dg~I~ 494 (609)
....+.++.|.+++.+++++ .+|.+. |....+.... ......... ....+.++.|.+++ .++++| ..|.+.
T Consensus 279 ~~~~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G~~~~-~~~f~~~~~~~~~~~l~~v~~~~d~-~~~a~G---~~G~v~ 351 (398)
T PLN00033 279 SARRIQNMGWRADGGLWLLT-RGGGLY-VSKGTGLTEE-DFDFEEADIKSRGFGILDVGYRSKK-EAWAAG---GSGILL 351 (398)
T ss_pred CccceeeeeEcCCCCEEEEe-CCceEE-EecCCCCccc-ccceeecccCCCCcceEEEEEcCCC-cEEEEE---CCCcEE
Confidence 34568899999999877765 556654 3333331100 001222211 12358889998876 577776 477666
Q ss_pred EEECCCCceeEEEc----CCCCeEEEEEcCCCCeEEEEEecCCCeEEEE
Q psy4876 495 FWNVSSGACLDSID----TKSQVCALLWNSDYKELVSAHGFAQNQLIIW 539 (609)
Q Consensus 495 iwd~~t~~~~~~~~----~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iw 539 (609)
... ..|+.-.... ....+..+.|.++++.+++ | .+|.|.-|
T Consensus 352 ~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~--G-~~G~il~~ 396 (398)
T PLN00033 352 RST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL--G-NDGVLLRY 396 (398)
T ss_pred EeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEE--e-CCcEEEEe
Confidence 553 4444433322 2346889999888888777 4 57776554
No 479
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=81.49 E-value=1.2e+02 Score=35.63 Aligned_cols=73 Identities=14% Similarity=0.054 Sum_probs=45.0
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCc----cceE---eec------CCcccEEEEEEcCCCCcEEEEE
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFST----QPIH---SLS------RHQAAVKAIAWCPWSPNVLASG 485 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~----~~~~---~~~------~h~~~V~~l~~sp~~~~llasg 485 (609)
..|.++....-+.+++..-.||+|.++|-.+.+..... .... .+. .+...+..++|+|.+..++...
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~ 339 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID 339 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence 45777777777889999999999999998876332211 1111 110 0111344578999886555553
Q ss_pred eccCCCeEE
Q psy4876 486 GGTADRHIY 494 (609)
Q Consensus 486 gGs~Dg~I~ 494 (609)
.++.+.
T Consensus 340 ---~~~~~~ 345 (753)
T PF11635_consen 340 ---EDGKTK 345 (753)
T ss_pred ---cCCCce
Confidence 566644
No 480
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=81.29 E-value=78 Score=33.51 Aligned_cols=190 Identities=15% Similarity=0.199 Sum_probs=107.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEE------ecCC---EEEEEecC---CeEEEEEcCCCCeeEEE
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALA------WNTY---ILSSGSRC---GNIVHHDVRSRDHKVAL 413 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~------~~~~---~L~sgs~d---g~I~iwd~~~~~~~~~~ 413 (609)
...+|+....++-+.+||++ |+.+..+.. +++..+. +++. ++++..++ ..|.+|.+......+..
T Consensus 67 ~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~ 143 (381)
T PF02333_consen 67 AKSLIIGTDKKGGLYVYDLD-GKELQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTD 143 (381)
T ss_dssp GG-EEEEEETTTEEEEEETT-S-EEEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE
T ss_pred ccceEEEEeCCCCEEEEcCC-CcEEEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceE
Confidence 34677777778889999997 466666642 3344333 3443 34444443 46999988643223333
Q ss_pred Ecc-------CCCCeEEEEEc--c-CCC-EEEEEeCCCcEEEEeCCC-CCCCCCccceEeecCCcccEEEEEEcCCCCcE
Q psy4876 414 LQN-------HTQEVCGLKWS--P-DGR-YLASGGNDNLLNIWSGVP-GQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNV 481 (609)
Q Consensus 414 ~~~-------h~~~V~~l~~s--p-dg~-~lasgs~Dg~I~iwd~~~-~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~l 481 (609)
+.. ....+.++|+- + +|. ++++...+|.+..|.+.. +......+.++.|.. ...+..+........|
T Consensus 144 v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~-~sQ~EGCVVDDe~g~L 222 (381)
T PF02333_consen 144 VTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV-GSQPEGCVVDDETGRL 222 (381)
T ss_dssp -CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE--SS-EEEEEEETTTTEE
T ss_pred cCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC-CCcceEEEEecccCCE
Confidence 321 22457788874 3 455 566677889888887753 222223356777764 3468888888776555
Q ss_pred EEEEeccCCCeEEEEECCC--C---ceeEEEcCC---CCeEEEEEc--CCCC-eEEEEEecCCCeEEEEECCC
Q psy4876 482 LASGGGTADRHIYFWNVSS--G---ACLDSIDTK---SQVCALLWN--SDYK-ELVSAHGFAQNQLIIWKYPS 543 (609)
Q Consensus 482 lasggGs~Dg~I~iwd~~t--~---~~~~~~~~~---~~v~sl~~s--~~g~-~l~~~sG~~dg~I~Iwd~~~ 543 (609)
++. -++.-|.-|+.+- + ..+...... ..+..|+.- .+++ ||+++ .-.+++..||+...
T Consensus 223 Yvg---EE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivS-sQG~~sf~Vy~r~~ 291 (381)
T PF02333_consen 223 YVG---EEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVS-SQGDNSFAVYDREG 291 (381)
T ss_dssp EEE---ETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEE-EGGGTEEEEEESST
T ss_pred EEe---cCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEE-cCCCCeEEEEecCC
Confidence 553 3777788888762 2 223222222 367777664 3444 45544 44688999999764
No 481
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=81.16 E-value=37 Score=32.53 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=72.2
Q ss_pred EeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEecCCeEEEEEcCCCCe---eEEEEccC-CCCeEEEEEcc
Q psy4876 353 GTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDH---KVALLQNH-TQEVCGLKWSP 428 (609)
Q Consensus 353 gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs~dg~I~iwd~~~~~~---~~~~~~~h-~~~V~~l~~sp 428 (609)
.-.+|.-.++|..+-+++..+. ..+.=+.++.++..|+.++...+++.-|..+-.. ...++.+. -..++.+.|-
T Consensus 107 Tw~egvaf~~d~~t~~~lg~~~-y~GeGWgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V- 184 (262)
T COG3823 107 TWKEGVAFKYDADTLEELGRFS-YEGEGWGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV- 184 (262)
T ss_pred EeccceeEEEChHHhhhhcccc-cCCcceeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-
Confidence 4467888899998888777765 4455577777777777777667777777654321 11112111 1122333332
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCCCCC------ccceEeecCCcccEEEEEEcCCCCcEEEEE
Q psy4876 429 DGRYLASGGNDNLLNIWSGVPGQHTFS------TQPIHSLSRHQAAVKAIAWCPWSPNVLASG 485 (609)
Q Consensus 429 dg~~lasgs~Dg~I~iwd~~~~~~~~~------~~~~~~~~~h~~~V~~l~~sp~~~~llasg 485 (609)
||...|-.=.+..|...|.++|+...- ...+..-..|..-...+++.|++..++++|
T Consensus 185 dG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 185 DGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred ccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 444444443344444444444421000 011111123445568899999998888886
No 482
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=80.59 E-value=27 Score=39.12 Aligned_cols=31 Identities=32% Similarity=0.448 Sum_probs=23.6
Q ss_pred CeEEEEEcc----CCCEEEEEeCCCcEEEEeCCCC
Q psy4876 420 EVCGLKWSP----DGRYLASGGNDNLLNIWSGVPG 450 (609)
Q Consensus 420 ~V~~l~~sp----dg~~lasgs~Dg~I~iwd~~~~ 450 (609)
.+..++++. +..++++.+.|+.+++||+.++
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~ 250 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETG 250 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTT
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCC
Confidence 345566655 6778999999999999999988
No 483
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=80.53 E-value=18 Score=38.99 Aligned_cols=62 Identities=15% Similarity=0.139 Sum_probs=48.7
Q ss_pred cCCEEEEEecCCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy4876 386 NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVP 449 (609)
Q Consensus 386 ~~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~ 449 (609)
...+++++++.|.|++||--.. .....+.+....|..|..+.+|+++++.+. ..+.+-|+.-
T Consensus 572 esGyIa~as~kGDirLyDRig~-rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~i 633 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGK-RAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVPI 633 (776)
T ss_pred cCceEEEecCCCceeeehhhcc-hhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEeccc
Confidence 3578999999999999986543 234556778889999999999998877665 6788888753
No 484
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=80.50 E-value=76 Score=32.88 Aligned_cols=164 Identities=16% Similarity=0.164 Sum_probs=91.9
Q ss_pred CCeEEEEEccCCCEEEEEeCCCc------EEEEeCCCCCC-CC--CccceEeecCCc--------ccEEEEEEcCCCCcE
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNL------LNIWSGVPGQH-TF--STQPIHSLSRHQ--------AAVKAIAWCPWSPNV 481 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~------I~iwd~~~~~~-~~--~~~~~~~~~~h~--------~~V~~l~~sp~~~~l 481 (609)
+.+.+|.+.+++..+++.+.+|. ++.+++..... .. .......+.... ....+|++.+++ .+
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g-~~ 98 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDG-SF 98 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCC-CE
Confidence 56788899865556666677777 66666554110 00 001111111111 134578886665 45
Q ss_pred EEEEeccCC------CeEEEEECCCCceeEEEc----------------CCCCeEEEEEcCCCCeEEEEEecC---CC--
Q psy4876 482 LASGGGTAD------RHIYFWNVSSGACLDSID----------------TKSQVCALLWNSDYKELVSAHGFA---QN-- 534 (609)
Q Consensus 482 lasggGs~D------g~I~iwd~~t~~~~~~~~----------------~~~~v~sl~~s~~g~~l~~~sG~~---dg-- 534 (609)
+++.- .+ ..|+.++.. |..+..+. .+....+++++++|+.|+++.... |+
T Consensus 99 ~is~E--~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~ 175 (326)
T PF13449_consen 99 WISSE--GGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPR 175 (326)
T ss_pred EEEeC--CccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcc
Confidence 55542 34 678888866 66544441 223678999999999776654221 22
Q ss_pred -------eEEEEEC--CC-CceEEEE----eC-----CCCCEEEEEEeCCCCEEEEEE-----CCCCEEEEEcCCC
Q psy4876 535 -------QLIIWKY--PS-LVKVAEL----HG-----HSARVLNLAMSPDETTVLSAG-----ADETLRLWKIFEK 586 (609)
Q Consensus 535 -------~I~Iwd~--~~-~~~~~~l----~~-----h~~~V~~l~~spdg~~L~s~s-----~Dg~I~iWdl~~~ 586 (609)
.++|+.+ .+ +.....+ .. ....|..+.+-+++++|+-== ....++|+.+.-.
T Consensus 176 ~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~l~ 251 (326)
T PF13449_consen 176 ANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVDLS 251 (326)
T ss_pred cccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEEcc
Confidence 1555544 33 2222222 21 346789999999999776422 3456677666543
No 485
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=80.16 E-value=1e+02 Score=34.12 Aligned_cols=270 Identities=16% Similarity=0.102 Sum_probs=137.9
Q ss_pred CceeEEEEEecCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCC
Q psy4876 268 NDYYLNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEG 347 (609)
Q Consensus 268 ~~~~v~~l~wsp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg 347 (609)
.+..|..+-+...|.+=++.+..+..+|..+ ++..++.....+..|..+.-+-.|
T Consensus 163 ~d~~V~aLv~D~~g~lWvgT~dGL~~fd~~~-------------------------gkalql~s~~~dk~I~al~~d~qg 217 (671)
T COG3292 163 KDTPVVALVFDANGRLWVGTPDGLSYFDAGR-------------------------GKALQLASPPLDKAINALIADVQG 217 (671)
T ss_pred cCccceeeeeeccCcEEEecCCcceEEcccc-------------------------ceEEEcCCCcchhhHHHHHHHhcC
Confidence 3556777888888866677777778888777 555554444344666666666556
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecC-CCCceEEEEec-CCEEEEEecCCeEEEEEcCCCCeeEEEEccC--CCCeEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDG-HDVRVGALAWN-TYILSSGSRCGNIVHHDVRSRDHKVALLQNH--TQEVCG 423 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~l~~~-~~~L~sgs~dg~I~iwd~~~~~~~~~~~~~h--~~~V~~ 423 (609)
. |.+|+.+| |.+.+.+..+....... ....|..+.-| ...+-.|+..|-.+.---+. .-.......| -+.|.+
T Consensus 218 ~-LWVGTdqG-v~~~e~~G~~~sn~~~~lp~~~I~ll~qD~qG~lWiGTenGl~r~~l~rq-~Lq~~~~~~~l~~S~vns 294 (671)
T COG3292 218 R-LWVGTDQG-VYLQEAEGWRASNWGPMLPSGNILLLVQDAQGELWIGTENGLWRTRLPRQ-GLQIPLSKMHLGVSTVNS 294 (671)
T ss_pred c-EEEEeccc-eEEEchhhccccccCCCCcchheeeeecccCCCEEEeecccceeEecCCC-CccccccccCCccccccc
Confidence 4 55688877 77777665222111111 22334444444 24566666666443322222 1111111112 245666
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCccc-EEEEEEcC--CCCcEEEEEeccCCCeEEEEECCC
Q psy4876 424 LKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA-VKAIAWCP--WSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 424 l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~-V~~l~~sp--~~~~llasggGs~Dg~I~iwd~~t 500 (609)
+-...+|. |-+++.++.+++-+.. - .....+....+. +..++..| .+..+... ..-+.+.+-+-.+
T Consensus 295 L~~D~dGs-LWv~t~~giv~~~~a~-w------~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~---ns~g~L~van~st 363 (671)
T COG3292 295 LWLDTDGS-LWVGTYGGIVRYLTAD-W------KRMAVINDSDGGVSQYEAVAPALLSWGVRQL---NSIGELMVANGST 363 (671)
T ss_pred eeeccCCC-EeeeccCceEEEecch-h------hheeeeecCCCchhhhhccCchhcccceeec---cccceEEEecCCC
Confidence 66666776 4455666665554322 1 111111111111 11111111 01011110 1223444455556
Q ss_pred CceeEEEcC--CCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCC-CceEEEEeC-CCCCEEEEEEeCCCCEEEEEECCC
Q psy4876 501 GACLDSIDT--KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS-LVKVAELHG-HSARVLNLAMSPDETTVLSAGADE 576 (609)
Q Consensus 501 ~~~~~~~~~--~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~-~~~~~~l~~-h~~~V~~l~~spdg~~L~s~s~Dg 576 (609)
|..+.+... ...|+.+++..++..-+. +..+-+..|+..+ +..+.+..+ ..++|..|.=.|+++ |..|+.+|
T Consensus 364 G~~v~sv~q~Rg~nit~~~~d~~g~lWlg---s~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~G 439 (671)
T COG3292 364 GELVRSVHQLRGMNITTTLEDSRGRLWLG---SMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGG 439 (671)
T ss_pred CcEEEEeeeccccccchhhhccCCcEEEE---ecccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCC
Confidence 666555322 235666777775554443 3465677777666 433333333 346788888888888 77788887
Q ss_pred CEEE
Q psy4876 577 TLRL 580 (609)
Q Consensus 577 ~I~i 580 (609)
.++.
T Consensus 440 lvk~ 443 (671)
T COG3292 440 LVKR 443 (671)
T ss_pred eEec
Confidence 6653
No 486
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=79.80 E-value=77 Score=32.52 Aligned_cols=48 Identities=17% Similarity=0.023 Sum_probs=35.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEecCCCCceEEEEecCCEEEEEe
Q psy4876 346 EGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGS 394 (609)
Q Consensus 346 dg~~Lasgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~~~~~L~sgs 394 (609)
+|++.++-+..|.|..+|.++|+...... -.+....+.|.|.++++|.
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~-vpG~~rGL~f~G~llvVgm 259 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAF-LPGFTRGLAFAGDFAFVGL 259 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEE-CCCCCcccceeCCEEEEEe
Confidence 57777777888999999988775444332 3356678888888887764
No 487
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=78.02 E-value=37 Score=34.38 Aligned_cols=117 Identities=16% Similarity=0.227 Sum_probs=69.3
Q ss_pred CCeEEEEEcCCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe------CCCcEEEEeCCCCCCCCCccceEeecC-----
Q psy4876 396 CGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGG------NDNLLNIWSGVPGQHTFSTQPIHSLSR----- 464 (609)
Q Consensus 396 dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~spdg~~lasgs------~Dg~I~iwd~~~~~~~~~~~~~~~~~~----- 464 (609)
...|++||....+ -...-.+-.+.|..|.|..+.++++.|. ....+..||+.+.. ...+..
T Consensus 15 C~~lC~yd~~~~q-W~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~-------w~~~~~~~s~~ 86 (281)
T PF12768_consen 15 CPGLCLYDTDNSQ-WSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT-------WSSLGGGSSNS 86 (281)
T ss_pred CCEEEEEECCCCE-eecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe-------eeecCCccccc
Confidence 4569999988752 3333334567899999987776777664 35578899988752 222222
Q ss_pred CcccEEEEEEcC-CCCcEEEEEec-cCCCeEEEEECCCCceeEE--EcCCCCeEEEEEcC
Q psy4876 465 HQAAVKAIAWCP-WSPNVLASGGG-TADRHIYFWNVSSGACLDS--IDTKSQVCALLWNS 520 (609)
Q Consensus 465 h~~~V~~l~~sp-~~~~llasggG-s~Dg~I~iwd~~t~~~~~~--~~~~~~v~sl~~s~ 520 (609)
-.++|..+.+.. ++..+++.|.. ..+..|..||=.....+.. +.....|..+.+-+
T Consensus 87 ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~~ 146 (281)
T PF12768_consen 87 IPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVLP 146 (281)
T ss_pred CCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEEe
Confidence 236788887743 34456665541 1234577777555544443 22234565555433
No 488
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=77.90 E-value=1.5e+02 Score=34.75 Aligned_cols=110 Identities=15% Similarity=0.197 Sum_probs=70.7
Q ss_pred cEEEEEEcC------CCCcEEEEEeccC--CCeEEEEECCCCc-eeE--------------------------EEcCCCC
Q psy4876 468 AVKAIAWCP------WSPNVLASGGGTA--DRHIYFWNVSSGA-CLD--------------------------SIDTKSQ 512 (609)
Q Consensus 468 ~V~~l~~sp------~~~~llasggGs~--Dg~I~iwd~~t~~-~~~--------------------------~~~~~~~ 512 (609)
.++.+.|-+ ....++++..... ...|.-|.+.... .++ .+..+..
T Consensus 182 ~LthL~ils~~~~~~~~p~Ili~~~~~~~~~SiI~RweL~~~~~~lh~~F~ql~s~~~~~~~~~~~~~l~~~~~i~~~~~ 261 (753)
T PF11635_consen 182 QLTHLEILSPTPDKDSAPEILIVYSSPNTPSSIIERWELREEQQPLHPAFQQLGSKKNSSSEPPPTYRLRRLDDITLNKR 261 (753)
T ss_pred cceeEEEeccCCCCCCCCeEEEEEEcCCCCCcEEEEEEEEccCcccchhhhhcCCCCcCCCCCCCceeEEEecccccCCe
Confidence 556666654 2334555543222 5679999886431 111 1112345
Q ss_pred eEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEE----e-----------C----CCCCEEEEEEeCCCCEEEEEE
Q psy4876 513 VCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL----H-----------G----HSARVLNLAMSPDETTVLSAG 573 (609)
Q Consensus 513 v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l----~-----------~----h~~~V~~l~~spdg~~L~s~s 573 (609)
|.++....-+..++.+ +.||+|.++|-.+++.+... . | +...+..++|||.+..++.-.
T Consensus 262 V~si~~~~~~~~v~~~--~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~ 339 (753)
T PF11635_consen 262 VVSITSPELDIVVAFA--FSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID 339 (753)
T ss_pred EEEEEecccCcEEEEE--EcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence 7777777777777774 48999999998877555433 1 0 112455689999999999999
Q ss_pred CCCCEE
Q psy4876 574 ADETLR 579 (609)
Q Consensus 574 ~Dg~I~ 579 (609)
.||.+.
T Consensus 340 ~~~~~~ 345 (753)
T PF11635_consen 340 EDGKTK 345 (753)
T ss_pred cCCCce
Confidence 999965
No 489
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=77.44 E-value=1.2e+02 Score=34.96 Aligned_cols=95 Identities=17% Similarity=0.259 Sum_probs=54.0
Q ss_pred EEEEccCCCEEEEEeCCC-----cEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEEEEE
Q psy4876 423 GLKWSPDGRYLASGGNDN-----LLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWN 497 (609)
Q Consensus 423 ~l~~spdg~~lasgs~Dg-----~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~iwd 497 (609)
.+.|-|+|..+++-+.|| .|..+.-....+. ..-.. .+....+..++|+-.. .+++.. ..+.|.+|-
T Consensus 251 ~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHG---ef~lr-~~~dEk~~~~~wn~~s-~vlav~---~~n~~~lwt 322 (1243)
T COG5290 251 QLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHG---EFDLR-VGCDEKAFLENWNLLS-TVLAVA---EGNLLKLWT 322 (1243)
T ss_pred ccccccCCceeeeeccCCCCCcceEEEEccCCcccC---Ccccc-CCchhhhhhhhhhHHH-HHHHHh---hcceEEEEE
Confidence 479999999999987665 3555554322110 11011 1223345667786654 344443 578899998
Q ss_pred CCCCceeEEEcC-CCCeEEEEEcCCCCeE
Q psy4876 498 VSSGACLDSIDT-KSQVCALLWNSDYKEL 525 (609)
Q Consensus 498 ~~t~~~~~~~~~-~~~v~sl~~s~~g~~l 525 (609)
..+-.-.-.... -.++.-+.|+|....-
T Consensus 323 tkNyhWYLK~e~~ip~~s~vkwhpe~~nT 351 (1243)
T COG5290 323 TKNYHWYLKVERQIPGISYVKWHPEEKNT 351 (1243)
T ss_pred ccceEEEEEEeecCCCcceeeeccccCcE
Confidence 765543333322 2466777888865443
No 490
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=76.91 E-value=43 Score=33.92 Aligned_cols=90 Identities=14% Similarity=0.234 Sum_probs=55.2
Q ss_pred CeEEEEeCCCCCCCceEEecCCccccccccccccccceeeeeeecCCCCeEEEEEccCCCEEEEEe------CCCeEEEE
Q psy4876 289 GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGT------SLGTVQLW 362 (609)
Q Consensus 289 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~~V~~v~~spdg~~Lasgs------~dg~I~iw 362 (609)
..|++||... .++..+..- -.+.|++|.|..+.+.++.|. ....+..|
T Consensus 16 ~~lC~yd~~~-------------------------~qW~~~g~~-i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~y 69 (281)
T PF12768_consen 16 PGLCLYDTDN-------------------------SQWSSPGNG-ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATY 69 (281)
T ss_pred CEEEEEECCC-------------------------CEeecCCCC-ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEE
Confidence 4789999887 444333221 467899999996666776664 34568889
Q ss_pred eCCCCeeEEEecC-----CCCceEEEEe---cCC-EEEEEe-cCC--eEEEEEcC
Q psy4876 363 DVSAKKKCRTMDG-----HDVRVGALAW---NTY-ILSSGS-RCG--NIVHHDVR 405 (609)
Q Consensus 363 d~~~~~~~~~l~~-----h~~~V~~l~~---~~~-~L~sgs-~dg--~I~iwd~~ 405 (609)
|..+.. ...+.+ -.++|..+.+ +.. +.+.|. .+| .|..||-.
T Consensus 70 d~~~~~-w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs 123 (281)
T PF12768_consen 70 DFKNQT-WSSLGGGSSNSIPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGS 123 (281)
T ss_pred ecCCCe-eeecCCcccccCCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCC
Confidence 988754 333333 2377888887 443 444443 233 35556544
No 491
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=76.57 E-value=1.6e+02 Score=34.51 Aligned_cols=116 Identities=15% Similarity=0.158 Sum_probs=74.5
Q ss_pred CCeEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCC----------cccEEEEEEcCCCCcEEEEEec
Q psy4876 419 QEVCGLKWSP-DGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRH----------QAAVKAIAWCPWSPNVLASGGG 487 (609)
Q Consensus 419 ~~V~~l~~sp-dg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h----------~~~V~~l~~sp~~~~llasggG 487 (609)
.+...++|+| +...||+....|...|||+........ ..+.....+ ...-..+.|.++...+|++
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~-~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~--- 221 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKS-SNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVC--- 221 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCC-cceeeccCCCccccCCCcccCcceeeEecCCCCEEEEE---
Confidence 4677899999 566899999999999999922211000 111111111 1233578898887777775
Q ss_pred cCCCeEEEEECCCCceeE---EEcCCCCeEEEEEcCC--CCeEEEEEecCCCeEEEEECCC
Q psy4876 488 TADRHIYFWNVSSGACLD---SIDTKSQVCALLWNSD--YKELVSAHGFAQNQLIIWKYPS 543 (609)
Q Consensus 488 s~Dg~I~iwd~~t~~~~~---~~~~~~~v~sl~~s~~--g~~l~~~sG~~dg~I~Iwd~~~ 543 (609)
....+.++|+.+..... .......|..+.-++. +..++. ....|...++..
T Consensus 222 -~r~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL----Ts~eiiw~~~~~ 277 (765)
T PF10214_consen 222 -NRSKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL----TSKEIIWLDVKS 277 (765)
T ss_pred -cCCceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEE----ecCeEEEEEccC
Confidence 47899999999876533 2223357888888887 233332 246777777765
No 492
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=76.38 E-value=1e+02 Score=32.04 Aligned_cols=232 Identities=16% Similarity=0.201 Sum_probs=111.0
Q ss_pred EEEEecCCC-eEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccce-eeeeee---c--CCCCeEEEEEcc
Q psy4876 273 NLIDWSHFN-VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAI-DHLMDL---E--GNENVCSVAWIQ 345 (609)
Q Consensus 273 ~~l~wsp~~-lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~---~--h~~~V~~v~~sp 345 (609)
..|+|.|++ ++++-..|.|++++... .. ..+..+ . .......++++|
T Consensus 5 ~~~a~~pdG~l~v~e~~G~i~~~~~~g--------------------------~~~~~v~~~~~v~~~~~~gllgia~~p 58 (331)
T PF07995_consen 5 RSMAFLPDGRLLVAERSGRIWVVDKDG--------------------------SLKTPVADLPEVFADGERGLLGIAFHP 58 (331)
T ss_dssp EEEEEETTSCEEEEETTTEEEEEETTT--------------------------EECEEEEE-TTTBTSTTBSEEEEEE-T
T ss_pred eEEEEeCCCcEEEEeCCceEEEEeCCC--------------------------cCcceecccccccccccCCcccceecc
Confidence 469999997 77777899999999332 21 122221 1 557789999999
Q ss_pred C---CCEEEEEeCC---------CeEEEEeCCCC-------e-eEEEecC---CCCceEEEEe--cCCEEEEEecC----
Q psy4876 346 E---GYMLGVGTSL---------GTVQLWDVSAK-------K-KCRTMDG---HDVRVGALAW--NTYILSSGSRC---- 396 (609)
Q Consensus 346 d---g~~Lasgs~d---------g~I~iwd~~~~-------~-~~~~l~~---h~~~V~~l~~--~~~~L~sgs~d---- 396 (609)
+ ..+|++.... ..|.-|....+ + .+..+.. ....-..|.| ++.+.++.+..
T Consensus 59 ~f~~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~ 138 (331)
T PF07995_consen 59 DFASNGYLYVYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDD 138 (331)
T ss_dssp TCCCC-EEEEEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGG
T ss_pred ccCCCCEEEEEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcc
Confidence 5 2344443331 13444444332 1 1122222 2344556777 56655555433
Q ss_pred ---------CeEEEEEcCCCC------------eeEEEEccCCCCeEEEEEccC-CCEEEEE-eCCCcEEEEeCCCCCC-
Q psy4876 397 ---------GNIVHHDVRSRD------------HKVALLQNHTQEVCGLKWSPD-GRYLASG-GNDNLLNIWSGVPGQH- 452 (609)
Q Consensus 397 ---------g~I~iwd~~~~~------------~~~~~~~~h~~~V~~l~~spd-g~~lasg-s~Dg~I~iwd~~~~~~- 452 (609)
|.|.-.+....- .....-.++. ....++|+|. |.++++= +.|+.=.|--+..+..
T Consensus 139 ~~~~~~~~~G~ilri~~dG~~p~dnP~~~~~~~~~~i~A~GlR-N~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nY 217 (331)
T PF07995_consen 139 NAQDPNSLRGKILRIDPDGSIPADNPFVGDDGADSEIYAYGLR-NPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNY 217 (331)
T ss_dssp GGCSTTSSTTEEEEEETTSSB-TTSTTTTSTTSTTTEEEE--S-EEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B-
T ss_pred cccccccccceEEEecccCcCCCCCccccCCCceEEEEEeCCC-ccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcC
Confidence 334333332110 0001111222 3457999998 7655442 2233222222332221
Q ss_pred ----------------------CCCccceEeecCCcccEEEEEEcCCC------CcEEEEEeccCCCeEEEEECCCCcee
Q psy4876 453 ----------------------TFSTQPIHSLSRHQAAVKAIAWCPWS------PNVLASGGGTADRHIYFWNVSSGACL 504 (609)
Q Consensus 453 ----------------------~~~~~~~~~~~~h~~~V~~l~~sp~~------~~llasggGs~Dg~I~iwd~~t~~~~ 504 (609)
.....++..+..| ..+..+.|.... ..+++.. -..+.|....+..+..+
T Consensus 218 GWP~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~--~~~~~i~~~~~~~~~~~ 294 (331)
T PF07995_consen 218 GWPYCEGGPKYSGPPIGDAPSCPGFVPPVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVAD--YGGGRIWRLDLDEDGSV 294 (331)
T ss_dssp -TTTBSSSCSTTSS-ECTGSS-TTS---SEEETTT---EEEEEEE-SSSSGGGTTEEEEEE--TTTTEEEEEEEETTEEE
T ss_pred CCCCCcCCCCCCCCccccccCCCCcCccceeecCc-cccCceEEECCccCccccCcEEEec--CCCCEEEEEeeecCCCc
Confidence 0011344555544 456677776432 2345544 24677888777644332
Q ss_pred EEE---c-C-CCCeEEEEEcCCCCeEEEEEecCCCeE
Q psy4876 505 DSI---D-T-KSQVCALLWNSDYKELVSAHGFAQNQL 536 (609)
Q Consensus 505 ~~~---~-~-~~~v~sl~~s~~g~~l~~~sG~~dg~I 536 (609)
... - . ...+..+++.|||.++++.. .+|.|
T Consensus 295 ~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d--~~G~i 329 (331)
T PF07995_consen 295 TEEEEFLGGFGGRPRDVAQGPDGALYVSDD--SDGKI 329 (331)
T ss_dssp EEEEEECTTSSS-EEEEEEETTSEEEEEE---TTTTE
T ss_pred cceEEccccCCCCceEEEEcCCCeEEEEEC--CCCeE
Confidence 221 1 2 23788999999988777743 45555
No 493
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=76.21 E-value=1e+02 Score=32.00 Aligned_cols=51 Identities=12% Similarity=0.024 Sum_probs=27.7
Q ss_pred CCCEEEEEeCC-----------CeEEEEeCCCCeeEEEecC---CCCceEEE-EecCCEEEEEecC
Q psy4876 346 EGYMLGVGTSL-----------GTVQLWDVSAKKKCRTMDG---HDVRVGAL-AWNTYILSSGSRC 396 (609)
Q Consensus 346 dg~~Lasgs~d-----------g~I~iwd~~~~~~~~~l~~---h~~~V~~l-~~~~~~L~sgs~d 396 (609)
+++..++|+.+ ..+..||..+.+-...-.. .......+ ..++++.+.|+.+
T Consensus 63 ~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~ 128 (346)
T TIGR03547 63 DGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVN 128 (346)
T ss_pred CCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcC
Confidence 56666677653 2477888876543222111 11122223 3478888888764
No 494
>KOG1900|consensus
Probab=76.02 E-value=41 Score=40.52 Aligned_cols=139 Identities=14% Similarity=0.209 Sum_probs=83.3
Q ss_pred eCCCeEEEEeCCCCeeEEEecCCCCceEEEEe-c----------CCEEEEEecCCeEEEEEcCCCC--eeEE------EE
Q psy4876 354 TSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW-N----------TYILSSGSRCGNIVHHDVRSRD--HKVA------LL 414 (609)
Q Consensus 354 s~dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-~----------~~~L~sgs~dg~I~iwd~~~~~--~~~~------~~ 414 (609)
+.|..+.+|+.+++.....+.+-...|..+.. . .++|+.+. --.|.++-+.-.. .... .+
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT-~~ei~ilgV~~~~~~~~~~~f~~~~~i 174 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVAT-PVEIVILGVSFDEFTGELSIFNTSFKI 174 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecc-cceEEEEEEEeccccCcccccccceee
Confidence 45678999999998888888887777777665 1 13444443 3445555432211 1111 12
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCC--CCCCCCCcc-----------------ceEeec-CCcccEEEEEE
Q psy4876 415 QNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGV--PGQHTFSTQ-----------------PIHSLS-RHQAAVKAIAW 474 (609)
Q Consensus 415 ~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~--~~~~~~~~~-----------------~~~~~~-~h~~~V~~l~~ 474 (609)
......|.++....+|+.|++|- ||.| |.+. .... +..+ .+..+. .+..+|..++.
T Consensus 175 ~~dg~~V~~I~~t~nGRIF~~G~-dg~l--yEl~Yq~~~g-Wf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~I 250 (1311)
T KOG1900|consen 175 SVDGVSVNCITYTENGRIFFAGR-DGNL--YELVYQAEDG-WFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITI 250 (1311)
T ss_pred ecCCceEEEEEeccCCcEEEeec-CCCE--EEEEEeccCc-hhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEe
Confidence 22356788999777888776654 5544 4332 1110 0000 112223 56779999999
Q ss_pred cCCCCcEEEEEeccCCCeEEEEECCC
Q psy4876 475 CPWSPNVLASGGGTADRHIYFWNVSS 500 (609)
Q Consensus 475 sp~~~~llasggGs~Dg~I~iwd~~t 500 (609)
.... .++.+- +..++|.+||+..
T Consensus 251 D~SR-~IlY~l--sek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 251 DNSR-NILYVL--SEKGTVSAYDIGG 273 (1311)
T ss_pred cccc-ceeeee--ccCceEEEEEccC
Confidence 8754 455554 3799999999975
No 495
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=75.90 E-value=37 Score=36.59 Aligned_cols=31 Identities=19% Similarity=0.400 Sum_probs=25.4
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy4876 419 QEVCGLKWSPDGRYLASGGNDNLLNIWSGVP 449 (609)
Q Consensus 419 ~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~ 449 (609)
..|..++..+..+.+++.+.+|.|.+|++..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3499999999889999999999999999975
No 496
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=75.63 E-value=17 Score=33.82 Aligned_cols=31 Identities=19% Similarity=0.212 Sum_probs=26.1
Q ss_pred CEEEEEEeCCC------CEEEEEECCCCEEEEEcCCC
Q psy4876 556 RVLNLAMSPDE------TTVLSAGADETLRLWKIFEK 586 (609)
Q Consensus 556 ~V~~l~~spdg------~~L~s~s~Dg~I~iWdl~~~ 586 (609)
.|..++|||-| .+|++.+.++.|.||.-...
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~~ 123 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPGN 123 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCCC
Confidence 68899999954 38889999999999987753
No 497
>KOG4659|consensus
Probab=74.50 E-value=2.2e+02 Score=34.93 Aligned_cols=21 Identities=19% Similarity=0.142 Sum_probs=13.9
Q ss_pred cCCcccEEEEEEcCCCCcEEE
Q psy4876 463 SRHQAAVKAIAWCPWSPNVLA 483 (609)
Q Consensus 463 ~~h~~~V~~l~~sp~~~~lla 483 (609)
..|-..+.+++.+|+|.-++|
T Consensus 658 ~A~lnsp~alaVsPdg~v~IA 678 (1899)
T KOG4659|consen 658 QAKLNSPYALAVSPDGDVIIA 678 (1899)
T ss_pred ccccCCcceEEECCCCcEEEe
Confidence 345566778888888854444
No 498
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=74.40 E-value=1.1e+02 Score=31.61 Aligned_cols=107 Identities=18% Similarity=0.216 Sum_probs=64.2
Q ss_pred CeEEEEEccCCCEEEEEeCC------CcEEEEeCCCCCCCCCcc-ceE--------eecCCcccEEEEEEcCCCCcEEEE
Q psy4876 420 EVCGLKWSPDGRYLASGGND------NLLNIWSGVPGQHTFSTQ-PIH--------SLSRHQAAVKAIAWCPWSPNVLAS 484 (609)
Q Consensus 420 ~V~~l~~spdg~~lasgs~D------g~I~iwd~~~~~~~~~~~-~~~--------~~~~h~~~V~~l~~sp~~~~llas 484 (609)
..-+|++.++|.++++.-.+ ..|+.++.. +....... +.. .-...+..+.+|+++|+|..++++
T Consensus 86 D~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~ 164 (326)
T PF13449_consen 86 DPEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA 164 (326)
T ss_pred ChhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence 34478887788888877667 788888876 43211110 110 112245678999999999866665
Q ss_pred Eecc--CCC-----------eEEEEECCC-Ccee----EEEc------CCCCeEEEEEcCCCCeEEE
Q psy4876 485 GGGT--ADR-----------HIYFWNVSS-GACL----DSID------TKSQVCALLWNSDYKELVS 527 (609)
Q Consensus 485 ggGs--~Dg-----------~I~iwd~~t-~~~~----~~~~------~~~~v~sl~~s~~g~~l~~ 527 (609)
..+. .|+ .|..||..+ +... ..++ ....+..+.+-+++++++.
T Consensus 165 ~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 165 MESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred ECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 4211 122 244455554 3222 2233 2457899999999997776
No 499
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=74.34 E-value=1.4e+02 Score=32.86 Aligned_cols=255 Identities=10% Similarity=0.057 Sum_probs=0.0
Q ss_pred cCCCeEEEEcCCeEEEEeCCCCCCCceEEecCCccccccccccccccc-eeeeeeecC-CCCeEEEEEccCC-CEEEEEe
Q psy4876 278 SHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRA-IDHLMDLEG-NENVCSVAWIQEG-YMLGVGT 354 (609)
Q Consensus 278 sp~~lla~s~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~h-~~~V~~v~~spdg-~~Lasgs 354 (609)
..+.++.+..+|.++...+.. .. -..+..+.. ....+++.+..+| .+|++|+
T Consensus 221 ~~~~~lL~~e~G~l~~l~l~~-------------------------~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs 275 (504)
T PF10433_consen 221 DGDRILLQDEDGDLYLLTLDN-------------------------DGGSISITYLGTLCSIASSLTYLKNGGDYLFVGS 275 (504)
T ss_dssp TSSEEEEEETTSEEEEEEEEE-------------------------EEEEEEEEEEEE--S-ESEEEEESTT--EEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEEEE-------------------------CCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEE
Q ss_pred C--CCeEEEEeCCCCeeEEEecCCCCceEEEEe-------cC------CEEEEEe--cCCeEEEEEcCCCCe--eEEEEc
Q psy4876 355 S--LGTVQLWDVSAKKKCRTMDGHDVRVGALAW-------NT------YILSSGS--RCGNIVHHDVRSRDH--KVALLQ 415 (609)
Q Consensus 355 ~--dg~I~iwd~~~~~~~~~l~~h~~~V~~l~~-------~~------~~L~sgs--~dg~I~iwd~~~~~~--~~~~~~ 415 (609)
. |+.+.-|....-+.+..+. .-++|..++. .. .++++++ .+|.+++..---+-. ......
T Consensus 276 ~~gds~l~~~~~~~l~~~~~~~-N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~ 354 (504)
T PF10433_consen 276 EFGDSQLLQISLSNLEVLDSLP-NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSE 354 (504)
T ss_dssp SSS-EEEEEEESESEEEEEEE-----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEE
T ss_pred ecCCcEEEEEeCCCcEEEEecc-CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccC
Q ss_pred cCC-CCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEE
Q psy4876 416 NHT-QEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIY 494 (609)
Q Consensus 416 ~h~-~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~ 494 (609)
... ..++.+....++..++..+....-+++.+..+........+ ...+-.....-+....-+...++=- ....|+
T Consensus 355 l~~v~~iW~l~~~~~~~~~lv~S~~~~T~vl~~~~~d~~e~~~e~-~~~~f~~~~~Tl~~~~~~~~~ivQV---t~~~i~ 430 (504)
T PF10433_consen 355 LPGVTGIWTLKLSSSDHSYLVLSFPNETRVLQISEGDDGEEVEEV-EEDGFDTDEPTLAAGNVGDGRIVQV---TPKGIR 430 (504)
T ss_dssp ESTEEEEEEE-SSSSSBSEEEEEESSEEEEEEES----SSEEEEE----TS-SSS-EEEEEEETTTEEEEE---ESSEEE
T ss_pred CCCceEEEEeeecCCCceEEEEEcCCceEEEEEecccCCcchhhh-hhccCCCCCCCeEEEEcCCCeEEEE---ecCeEE
Q ss_pred EEECCCCceeEEEcCCCCeEEEEEcCCCCeEEEEEecCCCeEEEEECCCCceEEEEeCC-----CCCEEEEEEeC
Q psy4876 495 FWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH-----SARVLNLAMSP 564 (609)
Q Consensus 495 iwd~~t~~~~~~~~~~~~v~sl~~s~~g~~l~~~sG~~dg~I~Iwd~~~~~~~~~l~~h-----~~~V~~l~~sp 564 (609)
+.+...++....+.......-++-+-.+.+++.+. .++.+.++.+............ ...|.|+..+|
T Consensus 431 l~~~~~~~~~~~w~~~~~~~I~~a~~~~~~v~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 431 LIDLEDGKLTQEWKPPAGSIIVAASINDPQVLVAL--SGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp EEESSSTSEEEEEE-TTS---SEEEESSSEEEEEE---TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred EEECCCCeEEEEEeCCCCCeEEEEEECCCEEEEEE--eCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
No 500
>KOG2714|consensus
Probab=74.24 E-value=91 Score=33.16 Aligned_cols=126 Identities=17% Similarity=0.245 Sum_probs=70.8
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecC----CCCceEEEEe-cCCEEEEE--------ecCCeEEEEEcCCCCeeEEEE
Q psy4876 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDG----HDVRVGALAW-NTYILSSG--------SRCGNIVHHDVRSRDHKVALL 414 (609)
Q Consensus 348 ~~Lasgs~dg~I~iwd~~~~~~~~~l~~----h~~~V~~l~~-~~~~L~sg--------s~dg~I~iwd~~~~~~~~~~~ 414 (609)
+.+..-+..+.|-+|+..+++....... ....-.-+.| ++..++.. ..++.|.+||.+...
T Consensus 236 ~~l~~~s~~~~Igvw~~~t~q~~d~~~~s~~dsag~~~kL~w~ng~~~li~~~~fp~~~kdN~~i~~~d~Rd~n------ 309 (465)
T KOG2714|consen 236 TQLVALSSVGKIGVWHAVTQQAQDVQPISSYDSAGSFLKLGWLNGSNLLIDSQKFPLRMKDNDLIVTEDFRDRN------ 309 (465)
T ss_pred hhhhhccccccccccchhhhceeeeeeccCccccCChhhhccccCceeEEEEeeccccccCCceEEEeeccCCC------
Confidence 3444455668899999988743332221 1123334556 34333222 346789999998764
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCcEEEEeCCCCCCCCCccceEeecCCcccEEEEEEcCCCCcEEEEEeccCCCeEE
Q psy4876 415 QNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIY 494 (609)
Q Consensus 415 ~~h~~~V~~l~~spdg~~lasgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~llasggGs~Dg~I~ 494 (609)
+...|. .++.++..+.+++-+..............++..|..+.. ++-.+ ...+.++
T Consensus 310 -------~~~~W~----~i~~gt~~~~vrv~~~~~~~~~~~~~l~~~f~~~~~~L~----------~idv~--~~~~~~~ 366 (465)
T KOG2714|consen 310 -------TSGNWI----EIAYGTSSGEVRVIDQHPETVGVGPCLFQTFEVHGSPLG----------LIDVC--SDGGHVR 366 (465)
T ss_pred -------ccceEE----EecCCccccceEeeeccccccCCCCeEEEEEEecCCCcc----------eeehh--hhCCcce
Confidence 224443 356667777888887655433333345556666665521 23222 3567888
Q ss_pred EEECCCCc
Q psy4876 495 FWNVSSGA 502 (609)
Q Consensus 495 iwd~~t~~ 502 (609)
+|......
T Consensus 367 ~~~~tr~r 374 (465)
T KOG2714|consen 367 VWNSTRFR 374 (465)
T ss_pred EEeecccc
Confidence 88876444
Done!