RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4876
(609 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 108 bits (270), Expect = 1e-26
Identities = 61/314 (19%), Positives = 114/314 (36%), Gaps = 72/314 (22%)
Query: 332 LEGNEN-VCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW----- 385
L G+ + V V + ++ + T+++WD RT+ GH V +++
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 386 ---------------------------------------NTYILSSGSRCGNIVHHDVRS 406
N + S SR I +V++
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 132
Query: 407 RDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ 466
V H + V ++ + DG +AS ND + +W + + L H+
Sbjct: 133 GYC-VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW------VVATKECKAELREHR 185
Query: 467 AAVKAIAWCPWSPNVLASGG-----------------GTADRHIYFWNVSSGACLDSIDT 509
V+ I+W P S S G+ D+ I W+VS+G CL ++
Sbjct: 186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 245
Query: 510 -KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETT 568
+ V +L++S K ++S L +W Y + + L+ H V +L
Sbjct: 246 HDNWVRGVLFHSGGKFILS--CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 303
Query: 569 VLSAGADETLRLWK 582
V++ D+T+++W+
Sbjct: 304 VVTGSVDQTVKVWE 317
Score = 70.2 bits (170), Expect = 9e-14
Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 10/170 (5%)
Query: 414 LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473
L H V + + P + S D + +W G +L H +V+ I+
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG------DFERTLKGHTDSVQDIS 66
Query: 474 WCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQ 533
+ + + + F + D +++ N D+ S
Sbjct: 67 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK--- 123
Query: 534 NQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
+ +W+ + V GH V + + D T + S D+T+R+W +
Sbjct: 124 -TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 172
Score = 49.0 bits (115), Expect = 9e-07
Identities = 21/128 (16%), Positives = 38/128 (29%), Gaps = 42/128 (32%)
Query: 319 CIQDNRAIDHLMDLEGNEN-VCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHD 377
+ D LM L G++N V V + G + T+++WD K+ +T++
Sbjct: 230 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-- 287
Query: 378 VRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGG 437
H V L + Y+ +G
Sbjct: 288 ---------------------------------------HEHFVTSLDFHKTAPYVVTGS 308
Query: 438 NDNLLNIW 445
D + +W
Sbjct: 309 VDQTVKVW 316
Score = 48.2 bits (113), Expect = 1e-06
Identities = 24/128 (18%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 456 TQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCA 515
++LS H++ V + + P +V+ S D I W+ +G ++ +
Sbjct: 7 PPEKYALSGHRSPVTRVIFHP-VFSVMVSAS--EDATIKVWDYETGDFERTLKGHTDSVQ 63
Query: 516 LLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGAD 575
+ + + A A + +W + + +HGH V ++++ P+ ++SA D
Sbjct: 64 DISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 122
Query: 576 ETLRLWKI 583
+T+++W++
Sbjct: 123 KTIKMWEV 130
Score = 41.3 bits (95), Expect = 2e-04
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 542 PSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
P + L GH + V + P + ++SA D T+++W
Sbjct: 5 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY 46
Score = 29.3 bits (64), Expect = 1.5
Identities = 17/97 (17%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 268 NDYYLNLIDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAID 327
D + + D S L +G ++ S K+I+ + + + + D +
Sbjct: 225 RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA----DDKTLRVWDYKNKR 280
Query: 328 HLMDLEGNEN-VCSVAWIQEGYMLGVGTSLGTVQLWD 363
+ L +E+ V S+ + + + G+ TV++W+
Sbjct: 281 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 92.5 bits (228), Expect = 5e-21
Identities = 38/248 (15%), Positives = 77/248 (31%), Gaps = 12/248 (4%)
Query: 338 VCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKC----RTMDGHDVRVGALAWNTYILSSG 393
V + A+ G + G ++++ ++ R + GH + +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVT 159
Query: 394 SRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHT 453
S + HT +V L +PD R SG D +W
Sbjct: 160 SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD------V 213
Query: 454 FSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQV 513
+ + H++ + AI + P R + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 514 CALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAG 573
++ ++ + L++ G+ +W + L GH RV L ++ D V +
Sbjct: 274 TSVSFSKSGRLLLA--GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGS 331
Query: 574 ADETLRLW 581
D L++W
Sbjct: 332 WDSFLKIW 339
Score = 86.7 bits (213), Expect = 5e-19
Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 12/185 (6%)
Query: 316 TSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDG 375
T +V S++ + + G + +LWDV +T G
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 376 HDVRVGALAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRY 432
H+ + A+ + + + ++ N + + +S GR
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL 284
Query: 433 LASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRH 492
L +G +D N+W L+ H V + +A+G D
Sbjct: 285 LLAGYDDFNCNVW------DALKADRAGVLAGHDNRVSCLGVTD-DGMAVATGS--WDSF 335
Query: 493 IYFWN 497
+ WN
Sbjct: 336 LKIWN 340
Score = 68.2 bits (165), Expect = 5e-13
Identities = 30/254 (11%), Positives = 77/254 (30%), Gaps = 7/254 (2%)
Query: 332 LEGNEN-VCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYIL 390
L G+ + ++ W + +L + G + +WD K + V A+
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 391 SSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPG 450
+ + + + ++E+ G + +
Sbjct: 111 YVACGGLDNICSIYNLKTREG--NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCAL 168
Query: 451 QHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT- 509
+ Q + + H V +++ P + ++ G D W+V G C +
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS---GACDASAKLWDVREGMCRQTFTGH 225
Query: 510 KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTV 569
+S + A+ + + + A +L + + + +++ S +
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285
Query: 570 LSAGADETLRLWKI 583
L+ D +W
Sbjct: 286 LAGYDDFNCNVWDA 299
Score = 59.0 bits (141), Expect = 5e-10
Identities = 31/235 (13%), Positives = 58/235 (24%), Gaps = 47/235 (20%)
Query: 414 LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473
L+ H ++ + W D R L S D L IW +++T +H++ + V A
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW------DSYTTNKVHAIPLRSSWVMTCA 104
Query: 474 WCPWSPNVLASGGGTADRHIYF-------------------------------------- 495
+ P V G
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 496 ---WNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG 552
+ T + + + G +W + G
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 553 HSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEIKNNASKFNSMFNS 607
H + + + P+ + D T RL+ + + N S+ S
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279
Score = 39.7 bits (91), Expect = 8e-04
Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Query: 438 NDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWN 497
+ L I + + + +L H A + A+ W +L S D + W+
Sbjct: 27 DATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGT-DSRLLVSAS--QDGKLIIWD 83
Query: 498 VSSGACLDSIDTKSQ-VCALLWNSDYKELVSAHGFAQNQLIIWK 540
+ + +I +S V + + + K
Sbjct: 84 SYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 86.4 bits (212), Expect = 8e-19
Identities = 55/332 (16%), Positives = 113/332 (34%), Gaps = 37/332 (11%)
Query: 275 IDWSHF-NVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLE 333
+ +S+ LA + ++ S + S + D ++
Sbjct: 68 VKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANK--------DPENLNTSSSPS 119
Query: 334 GNENVCSVAWIQEGYMLGVGTSLGTVQLWDVS--AKKKCRTMDGHDVRVGALAWNTYILS 391
+ + SV + +G L G +++WD+ D+ + L
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 179
Query: 392 SGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQ 451
SGS + D+R+ + L DG+Y+A+G D + +W G
Sbjct: 180 SGSGDRTVRIWDLRTGQCSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 452 HTFS-TQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT- 509
S + H+ +V ++ + +V++ G+ DR + WN+ + T
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVS---GSLDRSVKLWNLQNANNKSDSKTP 295
Query: 510 ------------KSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARV 557
K V ++ + + ++S G ++ W S + L GH V
Sbjct: 296 NSGTCEVTYIGHKDFVLSVATTQNDEYILS--GSKDRGVLFWDKKSGNPLLMLQGHRNSV 353
Query: 558 LNLA------MSPDETTVLSAGADETLRLWKI 583
+++A + P+ + D R+WK
Sbjct: 354 ISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 63.3 bits (152), Expect = 3e-11
Identities = 50/317 (15%), Positives = 93/317 (29%), Gaps = 79/317 (24%)
Query: 320 IQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVR 379
+ ++ L+ VC V + +G L G T Q++ VS +
Sbjct: 47 LPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG-CNKTTQVYRVSDGSLVARLSDDSAA 105
Query: 380 VGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND 439
+ + + + +SPDG++LA+G D
Sbjct: 106 NKDPEN-----------------------LNTSSSPSSDLYIRSVCFSPDGKFLATGAED 142
Query: 440 NLLNIWSGVPGQHTFSTQPIHSLSRHQ--------------------------------- 466
L+ IW + Q
Sbjct: 143 RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 202
Query: 467 --AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT--------KSQVCAL 516
V +A P +A+G DR + W+ +G ++ +D+ K V ++
Sbjct: 203 IEDGVTTVAVSPGDGKYIAAGS--LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 260
Query: 517 LWNSDYKELVSAHG----------FAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDE 566
++ D + +VS A N+ S GH VL++A + ++
Sbjct: 261 VFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND 320
Query: 567 TTVLSAGADETLRLWKI 583
+LS D + W
Sbjct: 321 EYILSGSKDRGVLFWDK 337
Score = 33.6 bits (75), Expect = 0.073
Identities = 22/150 (14%), Positives = 50/150 (33%), Gaps = 26/150 (17%)
Query: 458 PIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD-----SIDTKSQ 512
P + + H + S +V + + + +N + +D S+D S
Sbjct: 5 PYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSV 64
Query: 513 VCALLWNSDYKELVSAHGFAQNQLIIW------------------KYPSLVKVAELHGHS 554
VC + +++D + L + ++ K P + +
Sbjct: 65 VCCVKFSNDGEYLATG---CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSD 121
Query: 555 ARVLNLAMSPDETTVLSAGADETLRLWKIF 584
+ ++ SPD + + D +R+W I
Sbjct: 122 LYIRSVCFSPDGKFLATGAEDRLIRIWDIE 151
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 72.2 bits (175), Expect = 3e-14
Identities = 29/184 (15%), Positives = 60/184 (32%), Gaps = 5/184 (2%)
Query: 319 CIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDV 378
+ D L L+G+ N +G + G+ ++++WDV T+ GH
Sbjct: 160 KVWDPETETCLHTLQGHTNRVYS-LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 218
Query: 379 RVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGN 438
+ IL SG+ + D+++ L + + + ++ + +
Sbjct: 219 LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD 278
Query: 439 DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG--GTADRHIYFW 496
D + +W G+ V I + V A G GT + +
Sbjct: 279 DGTVKLWDLKTGEF-IRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVL 336
Query: 497 NVSS 500
+
Sbjct: 337 DFDV 340
Score = 69.8 bits (169), Expect = 2e-13
Identities = 45/314 (14%), Positives = 101/314 (32%), Gaps = 35/314 (11%)
Query: 289 GSIYLWNGESD---------SNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVC 339
++ +W+ + + + + S +
Sbjct: 37 NTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 96
Query: 340 SVA---WIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRC 396
+ + G+ T+++WD+ + + GH V + ++ + SG+
Sbjct: 97 TSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYD 156
Query: 397 GNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFST 456
+ D + + LQ HT V DG ++ SG D + +W +
Sbjct: 157 FMVKVWDPE-TETCLHTLQGHTNRVY--SLQFDGIHVVSGSLDTSIRVW------DVETG 207
Query: 457 QPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCAL 516
IH+L+ HQ+ + N+L SG AD + W++ +G CL ++ ++ +
Sbjct: 208 NCIHTLTGHQSLTSGMEL---KDNILVSG--NADSTVKIWDIKTGQCLQTLQGPNKHQSA 262
Query: 517 LWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAEL-----HGHSARVLNLAMSPDETTVLS 571
+ + + + +W + + L G V + S +
Sbjct: 263 VTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV 322
Query: 572 AGADET----LRLW 581
+ T L +
Sbjct: 323 GSRNGTEETKLLVL 336
Score = 55.6 bits (132), Expect = 6e-09
Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 19/252 (7%)
Query: 332 LEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILS 391
L+G+++ G + G+ T+++W K RT+ GH V + I+
Sbjct: 12 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 71
Query: 392 SGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQ 451
SGS + + + + + + + SG D L +W GQ
Sbjct: 72 SGSTDRTLKVWNAETGECIH---TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ 128
Query: 452 HTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS 511
+ A+ + + SG D + W+ + CL ++ +
Sbjct: 129 CLHVLMGHVA---------AVRCVQYDGRRVVSGAY--DFMVKVWDPETETCLHTLQGHT 177
Query: 512 QVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLS 571
D +VS G + +W + + L GH + M + ++S
Sbjct: 178 NRVY-SLQFDGIHVVS--GSLDTSIRVWDVETGNCIHTLTGHQSLT--SGMELKDNILVS 232
Query: 572 AGADETLRLWKI 583
AD T+++W I
Sbjct: 233 GNADSTVKIWDI 244
Score = 54.0 bits (128), Expect = 2e-08
Identities = 38/223 (17%), Positives = 76/223 (34%), Gaps = 20/223 (8%)
Query: 362 WDVSAKKKCRTMDGHDVRV-GALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQE 420
W K + + GHD V L + + SGS + + + L HT
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKC-LRTLVGHTGG 59
Query: 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPN 480
V + + + + + + + IH+L H + V+ +
Sbjct: 60 VWSSQMRDNIIISG--------STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV 111
Query: 481 VLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWK 540
G+ D + W++ +G CL + + + G + +W
Sbjct: 112 S-----GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR---VVSGAYDFMVKVWD 163
Query: 541 YPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
+ + L GH+ RV + + D V+S D ++R+W +
Sbjct: 164 PETETCLHTLQGHTNRVYS--LQFDGIHVVSGSLDTSIRVWDV 204
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 70.2 bits (170), Expect = 1e-13
Identities = 42/300 (14%), Positives = 83/300 (27%), Gaps = 44/300 (14%)
Query: 324 RAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVS-----AKKKCRTMDGHDV 378
R + L E VC+V + G G V++WD+S + D
Sbjct: 40 RHARQINTLNHGEVVCAVTISNPTRHVYTG-GKGCVKVWDISHPGNKSPVSQLDCLNRDN 98
Query: 379 RVGALAW--NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLK----------- 425
+ + + L G + D+ + ++ + C
Sbjct: 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 158
Query: 426 ----------------------WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLS 463
DG ND G+
Sbjct: 159 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL 218
Query: 464 RHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYK 523
+ I + P G ++ +V+ +S V +L + K
Sbjct: 219 QQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGK 278
Query: 524 ELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
VS N L W+ P + + S+ VL+ +S D+ +++ D+ ++++
Sbjct: 279 WFVSTG--KDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 62.1 bits (149), Expect = 4e-11
Identities = 27/180 (15%), Positives = 53/180 (29%), Gaps = 10/180 (5%)
Query: 319 CIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDV 378
+ D + +G+ + S I L + +
Sbjct: 166 AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS 225
Query: 379 RVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGN 438
++ +L + + + L H V LK++ G++ S G
Sbjct: 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGK 285
Query: 439 DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNV 498
DNLLN W G F + + ++V + + +G G D+ + V
Sbjct: 286 DNLLNAWRTPYGASIFQS-------KESSSVLSCDISV-DDKYIVTGSG--DKKATVYEV 335
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 68.7 bits (166), Expect = 3e-13
Identities = 46/289 (15%), Positives = 98/289 (33%), Gaps = 49/289 (16%)
Query: 333 EGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSS 392
E ++ V + + + + G T+++WD + + R + GH V L ++ ++ +
Sbjct: 13 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIIT 70
Query: 393 GSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSP--------------DGRYLASGGN 438
GS + DV + + L+ + + + D
Sbjct: 71 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL 130
Query: 439 DNLLNIWSGVPGQHTFSTQPIHSLS-----------------RHQAAVKAIAWCPWSPNV 481
+L F + I S S + IA + +
Sbjct: 131 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL 190
Query: 482 LASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541
+ SG ++D I W++ GACL ++ ++ + G ++ +W
Sbjct: 191 VVSG--SSDNTIRLWDIECGACLRVLEGHEELV---RCIRFDNKRIVSGAYDGKIKVWDL 245
Query: 542 PSLVK---------VAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581
+ + + L HS RV + DE ++S+ D+T+ +W
Sbjct: 246 VAALDPRAPAGTLCLRTLVEHSGRVF--RLQFDEFQIVSSSHDDTILIW 292
Score = 61.0 bits (146), Expect = 9e-11
Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 11/144 (7%)
Query: 357 GTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQN 416
T+++W+ S + RT++GH + L + ++ SGS I D+ L
Sbjct: 158 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC---LRVL 214
Query: 417 HTQEVCGLKWSPDGRYLASGGNDNLLNIW---SGVPGQHTFSTQPIHSLSRHQAAVKAIA 473
E D + + SG D + +W + + + T + +L H V +
Sbjct: 215 EGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 274
Query: 474 WCPWSPNVLASGGGTADRHIYFWN 497
+ + S D I W+
Sbjct: 275 F---DEFQIVSSS--HDDTILIWD 293
Score = 54.5 bits (129), Expect = 1e-08
Identities = 26/135 (19%), Positives = 57/135 (42%), Gaps = 11/135 (8%)
Query: 319 CIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDV 378
+ + + + L G++ + ++ G+S T++LWD+ R ++GH+
Sbjct: 161 KVWNTSTCEFVRTLNGHKRGIAC-LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 219
Query: 379 RVGALAWNTYILSSGSRCGNIVHHDVRSRDHK--------VALLQNHTQEVCGLKWSPDG 430
V + ++ + SG+ G I D+ + + L H+ V L++ D
Sbjct: 220 LVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 277
Query: 431 RYLASGGNDNLLNIW 445
+ S +D+ + IW
Sbjct: 278 FQIVSSSHDDTILIW 292
Score = 42.5 bits (98), Expect = 9e-05
Identities = 33/211 (15%), Positives = 65/211 (30%), Gaps = 44/211 (20%)
Query: 409 HKVALLQNHTQEVCGLK-WSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQA 467
H + + ++ G+ D + + SG DN + IW + + L+ H
Sbjct: 3 HSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWD------KNTLECKRILTGHTG 56
Query: 468 AVKAIAW-----------------------------------CPWSPNVLASGGGTADRH 492
+V + + N + DR
Sbjct: 57 SVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS 116
Query: 493 IYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHG 552
I W+++S + A + D+ + + +W + V L+G
Sbjct: 117 IAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG 176
Query: 553 HSARVLNLAMSPDETTVLSAGADETLRLWKI 583
H + + + V+S +D T+RLW I
Sbjct: 177 HKRGIAC--LQYRDRLVVSGSSDNTIRLWDI 205
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 65.3 bits (157), Expect = 6e-12
Identities = 22/205 (10%), Positives = 51/205 (24%), Gaps = 14/205 (6%)
Query: 385 WNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNI 444
+ + G I +D+ R A + D + L +L
Sbjct: 147 PLKHGETDGYVMQAIHVYDMEGRKIFAAT--TENSHDYAPAFDADSKNLYYLSYRSLDPS 204
Query: 445 WSGVPGQHTF-STQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSG-- 501
V +F + + P S A D + ++
Sbjct: 205 PDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPG 264
Query: 502 ---ACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVL 558
+ + + A + L+ + + ++ +
Sbjct: 265 DYRMIIPLESSILIYSVPVHGEFAAYYQGAPE--KGVLLKYDVKT----RKVTEVKNNLT 318
Query: 559 NLAMSPDETTVLSAGADETLRLWKI 583
+L +S D TV+ D + + +
Sbjct: 319 DLRLSADRKTVMVRKDDGKIYTFPL 343
Score = 44.9 bits (104), Expect = 2e-05
Identities = 10/117 (8%), Positives = 29/117 (24%), Gaps = 14/117 (11%)
Query: 338 VCSVAWIQEGYMLGVG----TSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNT-----Y 388
+ G + R + + + +
Sbjct: 230 PNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAA 289
Query: 389 ILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIW 445
G ++ +DV++R + + L+ S D + + +D + +
Sbjct: 290 YYQGAPEKGVLLKYDVKTRK-----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
Score = 27.9 bits (60), Expect = 3.7
Identities = 5/39 (12%), Positives = 15/39 (38%)
Query: 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMD 374
N+ + + + V G + + + + RT++
Sbjct: 315 NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 62.2 bits (149), Expect = 5e-11
Identities = 9/87 (10%), Positives = 22/87 (25%), Gaps = 3/87 (3%)
Query: 411 VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVK 470
V + Q + +K P L D L ++ + R++ +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA---KNVDLLQSLRYKHPLL 60
Query: 471 AIAWCPWSPNVLASGGGTADRHIYFWN 497
+ + + G +
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLI 87
Score = 56.4 bits (134), Expect = 3e-09
Identities = 28/278 (10%), Positives = 74/278 (26%), Gaps = 27/278 (9%)
Query: 338 VCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK---KCRTMDGHDVRVGALAWN---TYILS 391
+ + I +L + + G++ ++ + + + + +
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 392 SGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQ 451
G+ G I+ D+ AL N L + D L+ +
Sbjct: 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133
Query: 452 HTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACL------- 504
+ + + K S ++ + + ++ +
Sbjct: 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVG---MNNSQVQWFRLPLCEDDNGTIEES 190
Query: 505 -----------DSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGH 553
+ + C+ + E G N + + +
Sbjct: 191 GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNL 250
Query: 554 SARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKK 591
+ V ++ SP + +AG+D + W + + K K
Sbjct: 251 AYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288
Score = 41.4 bits (95), Expect = 2e-04
Identities = 12/121 (9%), Positives = 28/121 (23%), Gaps = 6/121 (4%)
Query: 416 NHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPG------QHTFSTQPIHSLSRHQAAV 469
Q + A D + + F+ + +
Sbjct: 192 LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA 251
Query: 470 KAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAH 529
+ +SP +D I WN+ + + + ++ + L A
Sbjct: 252 YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311
Query: 530 G 530
Sbjct: 312 S 312
Score = 38.7 bits (88), Expect = 0.002
Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 8/100 (8%)
Query: 388 YILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSG 447
N N V +++SP ++L + G+D +++ W
Sbjct: 221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW-- 278
Query: 448 VPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGG 487
+ + + I + ++ + S N+L
Sbjct: 279 ----NLQTRKKIKNFAKFNEDS-VVKIAC-SDNILCLATS 312
Score = 38.3 bits (87), Expect = 0.002
Identities = 17/131 (12%), Positives = 36/131 (27%), Gaps = 6/131 (4%)
Query: 292 YLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLG 351
D +SK +L D V S+ + L
Sbjct: 208 GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY 267
Query: 352 VGTSLGTVQLWDVSAKKKCRTMDGHD-VRVGALAWNTYILSSGSRCGNIVHHDVRSRDHK 410
S G + W++ +KK + + V +A + IL + + +
Sbjct: 268 TAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQT-- 325
Query: 411 VALLQNHTQEV 421
++ + +
Sbjct: 326 ---IELNASSI 333
Score = 37.5 bits (85), Expect = 0.004
Identities = 5/34 (14%), Positives = 15/34 (44%)
Query: 550 LHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
+ ++ + P ++ +L D +L ++K
Sbjct: 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKF 40
Score = 36.4 bits (82), Expect = 0.008
Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 7/87 (8%)
Query: 457 QPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC----LDSIDTKSQ 512
Q + + + I P S ++L D + + A L S+ K
Sbjct: 2 QIVQIEQAPKDYISDIKIIP-SKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYKHP 58
Query: 513 VCALLWNSDYKELVSAHGFAQNQLIIW 539
+ + + + L +
Sbjct: 59 LLCCNFIDNTDLQIYVGTVQGEILKVD 85
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 59.8 bits (143), Expect = 3e-10
Identities = 18/297 (6%), Positives = 64/297 (21%), Gaps = 41/297 (13%)
Query: 322 DNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSL-GTVQLWDVSAKK------KCRTMD 374
+ + + + + V + G + D+ K
Sbjct: 26 ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 85
Query: 375 GHDVRVGALAWNTY--ILSSGSRCGNIVHHDVRSRDHKVALLQNHTQE------------ 420
+ + A + + + ++ + ++ +
Sbjct: 86 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR 145
Query: 421 -VCGLKWSPDGRYLASGGNDNLLNIWSGV----------PGQHTFSTQPI---HSLSRHQ 466
V ++ + DG +G + +++ +G + + + S
Sbjct: 146 QVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH 205
Query: 467 AAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK--SQVCALLWNSDYKE 524
+ + ++ +G L +
Sbjct: 206 EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN 265
Query: 525 LVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581
+ N+L + + + +A + G L ++
Sbjct: 266 QIY---GVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVF 318
Score = 51.7 bits (122), Expect = 1e-07
Identities = 22/221 (9%), Positives = 54/221 (24%), Gaps = 15/221 (6%)
Query: 341 VAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMD-GHDVRVGALAWN---TYILSSGSRC 396
A + V + + DV++ ++ G +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 397 GNIVHHDVRSRDHKVALLQN-----HTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQ 451
G+I D+ + + + + + SPDG+ + + N V
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 452 HTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGG----TADRHIYFWNVSSGACLDSI 507
+ +A P ++ + A IY +V +G ++
Sbjct: 122 PRLEV--FSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVAL 179
Query: 508 DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVA 548
++ D +++
Sbjct: 180 PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK 220
Score = 44.7 bits (104), Expect = 2e-05
Identities = 21/178 (11%), Positives = 46/178 (25%), Gaps = 10/178 (5%)
Query: 276 DWSHFNVLAVALGGSIYLWNGE------SDSNSKYIICQSPLVQELTSKCIQDNRAIDHL 329
++ A GS+Y+ + + ++ S
Sbjct: 143 MPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQS 202
Query: 330 MDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDV-SAKKKCRTMDGHDVRVGALAWNTY 388
E + + + L D+ + K + +
Sbjct: 203 PRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPK 262
Query: 389 ILSSGSRCGNIVH-HDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIW 445
+ N + +D++ R A +HT + + G L GG N L ++
Sbjct: 263 DPNQIYGVLNRLAKYDLKQRKLIKAANLDHT--YYCVAFDKKGDKLYLGGTFNDLAVF 318
Score = 39.0 bits (89), Expect = 0.001
Identities = 20/165 (12%), Positives = 44/165 (26%), Gaps = 16/165 (9%)
Query: 423 GLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVL 482
G Y+ N L++ + + + + P +
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDT-VYKSCVMP----DKFGPGTAMMAPDNRTAY 55
Query: 483 ASGGGTADRHIYFWNVSSGACLDSI-------DTKSQVCALLWNSDYKELVSAHGFAQNQ 535
IY ++ + + + + + D KE+ + Q
Sbjct: 56 VLNNH--YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRL 113
Query: 536 LII--WKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETL 578
K P L + G A+ + P + ++ A D +L
Sbjct: 114 NDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL 158
Score = 32.0 bits (71), Expect = 0.17
Identities = 13/120 (10%), Positives = 32/120 (26%), Gaps = 8/120 (6%)
Query: 267 QNDYYLNLIDWSHFNVLAVALG-GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRA 325
Y +D + + G I D +
Sbjct: 227 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-----NRLAKYDLKQ 281
Query: 326 IDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMD--GHDVRVGAL 383
+ + VA+ ++G L +G + + +++ +K + + G D+
Sbjct: 282 RKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTP 341
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 59.9 bits (143), Expect = 4e-10
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 417 HTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCP 476
+ + W+ D +A N++ ++I+ + +H L H V + W P
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW----VQVHELKEHNGQVTGVDWAP 61
Query: 477 WSPNVLASGGGTADRHIYFWN 497
S N + + G DR+ Y W
Sbjct: 62 DS-NRIVTCG--TDRNAYVWT 79
Score = 59.1 bits (141), Expect = 6e-10
Identities = 26/267 (9%), Positives = 74/267 (27%), Gaps = 26/267 (9%)
Query: 336 ENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKK--KCRTMDGHDVRVGALAW--NTYILS 391
E + AW ++ + + + V +++ S K + + H+ +V + W ++ +
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 392 SGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQ 451
+ N ++ R K L+ + G+ + + +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 452 HTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKS 511
+ + + S ++ +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK----CRIFSAYIKEVEERPAPTP 183
Query: 512 QVCALLWNSDYKELVSAHG-----------------FAQNQLIIWKYPSLVKVAELHGHS 554
+ + E S+ G + + + + VA L +
Sbjct: 184 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243
Query: 555 ARVLNLAMSPDETTVLSAGADETLRLW 581
+L + + ++++AG D L+
Sbjct: 244 LPLLAVTFITES-SLVAAGHDCFPVLF 269
Score = 49.9 bits (117), Expect = 6e-07
Identities = 34/328 (10%), Positives = 91/328 (27%), Gaps = 23/328 (7%)
Query: 275 IDWSHFN--VLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDL 332
+DW+ + ++ + Y+W K + + + N +
Sbjct: 57 VDWAPDSNRIVTCGTDRNAYVWT-LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG 115
Query: 333 EGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSS 392
++C + ++ + + + ++ YI
Sbjct: 116 SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV 175
Query: 393 GSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQH 452
R + + V G+ +S +G +A +D+ + +
Sbjct: 176 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA------D 229
Query: 453 TFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQ 512
+ +L+ + A+ + S +++A+G D + S A S +
Sbjct: 230 ADKKMAVATLASETLPLLAVTFITES-SLVAAG---HDCFPVLFTYDSAAGKLSFGGRLD 285
Query: 513 VCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDE----TT 568
V + + + H V +++ +
Sbjct: 286 VPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL--DSLHKNSVSQISVLSGGKAKCSQ 343
Query: 569 VLSAGADETLRLWKIFEKVKSKKKEIKN 596
+ G D + +W V+S + +K+
Sbjct: 344 FCTTGMDGGMSIW----DVRSLESALKD 367
Score = 48.3 bits (113), Expect = 2e-06
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 513 VCALLWNSDYKELVSAHGFAQNQLIIWKYPS--LVKVAELHGHSARVLNLAMSPDETTVL 570
+ WN D ++ +++ I++ V+V EL H+ +V + +PD ++
Sbjct: 10 ISCHAWNKDRTQIAICPN--NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 571 SAGADETLRLWKIF 584
+ G D +W +
Sbjct: 68 TCGTDRNAYVWTLK 81
Score = 28.7 bits (62), Expect = 2.0
Identities = 5/48 (10%), Positives = 18/48 (37%)
Query: 557 VLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEIKNNASKFNSM 604
+ A + D T + + + +++ + E+K + + +
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGV 57
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 58.3 bits (139), Expect = 9e-10
Identities = 30/289 (10%), Positives = 58/289 (20%), Gaps = 27/289 (9%)
Query: 320 IQDNRAIDHLMDLEGNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDV 378
+ + + G ++ D+ + +D
Sbjct: 18 TEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77
Query: 379 RVGALAWNTYILSSGSRCGNIVHHDVRSRDH-----------------KVALLQNHTQEV 421
+ LS + I VR +++
Sbjct: 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI 137
Query: 422 CGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPI---HSLSRHQAAVKAIAWCPWS 478
L W+ DG L G D + Q AV
Sbjct: 138 TMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGV 197
Query: 479 PNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLII 538
+G ++T + D +A A+ +
Sbjct: 198 MATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG 257
Query: 539 WKYPSLV------KVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581
+ ++ +S D +TV GA L +
Sbjct: 258 AYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAY 306
Score = 47.9 bits (112), Expect = 2e-06
Identities = 24/201 (11%), Positives = 57/201 (28%), Gaps = 12/201 (5%)
Query: 275 IDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEG 334
+ W+ LG +++ + E+ + + QS + D A+ + + G
Sbjct: 140 LAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQ---PDVLAVWNQHESSG 196
Query: 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDV-SAKKKCRTMDGHDVRVGALAWNTYILSSG 393
++ + D+ + + R + DV + A N +
Sbjct: 197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAF 256
Query: 394 SRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHT 453
+ D+ + + S DG + GG L +
Sbjct: 257 GAYNVLESFDLEK--NASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYD------A 308
Query: 454 FSTQPIHSLSRHQAAVKAIAW 474
+ + + A ++A
Sbjct: 309 ETLEKKGQVDLPGNASMSLAS 329
Score = 44.0 bits (102), Expect = 3e-05
Identities = 20/241 (8%), Positives = 52/241 (21%), Gaps = 29/241 (12%)
Query: 352 VGTSLGTVQLWDVSAKKKCRTMDGHDV--RVGALAWN---TYILSSGSRCGNIVHHDVRS 406
+ + D + + D ++ ++ ++V D+ +
Sbjct: 6 APARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65
Query: 407 ----RDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSL 462
++ + + + G SPDG+ LA + L + + +L
Sbjct: 66 GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125
Query: 463 SRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDY 522
+ +Y D + L+ +
Sbjct: 126 -------SRRKAFEAPRQITMLAWARDGSKLYGLGR------DLHVMDPEAGTLVEDKPI 172
Query: 523 KELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWK 582
+ + + L +W D L
Sbjct: 173 QSWEAETYAQPDVLAVW-------NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMD 225
Query: 583 I 583
+
Sbjct: 226 L 226
Score = 36.7 bits (83), Expect = 0.006
Identities = 20/173 (11%), Positives = 42/173 (24%), Gaps = 21/173 (12%)
Query: 431 RYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTAD 490
Y+ + + L + I P A+
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVD-KVITIAD---AGPTPMVPMVAPGGRIAYATVNK--S 55
Query: 491 RHIYFWNVSSGACLDSIDTKSQVC------ALLWNSDYKELVSA---------HGFAQNQ 535
+ ++ +G L ID + + D K L H Q
Sbjct: 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115
Query: 536 LIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVK 588
+ + + ++ LA + D + + G D + + V+
Sbjct: 116 RVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVE 168
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 58.7 bits (140), Expect = 9e-10
Identities = 34/346 (9%), Positives = 94/346 (27%), Gaps = 66/346 (19%)
Query: 289 GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWI-QEG 347
G + +W+ + + + + H L + + ++ E
Sbjct: 34 GYLKVWDNKLL--------------DNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFEL 79
Query: 348 YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDV----------RVGALAWNT-------YIL 390
++ + G + + ++ + + + + + AL W + L
Sbjct: 80 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRL 139
Query: 391 SSGSRCGNIVHHDVRSRDH-----------------KVALLQNHTQEVCGLKWSPDGRYL 433
+ G V +Q + S G +
Sbjct: 140 VATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 198
Query: 434 ASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHI 493
A+G N+ + I + ++ + HS+ + +++++ + P + + + I
Sbjct: 199 ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCI 258
Query: 494 YFWNVSSGACLDSIDTKSQVCALLWNSDYKE------------LVSAHGFAQNQLIIWKY 541
+ G + S+ + +L W
Sbjct: 259 TLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 318
Query: 542 PSLVKVAELHGHSARV----LNLAMSPDETTVLSAGADETLRLWKI 583
+ ++ L+ H + LA+ ++ G + L K
Sbjct: 319 KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 364
Score = 51.8 bits (122), Expect = 1e-07
Identities = 9/103 (8%), Positives = 29/103 (28%), Gaps = 10/103 (9%)
Query: 411 VALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVK 470
+ H ++ + + S D L +W + +S H++ +
Sbjct: 7 ANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64
Query: 471 AIAWCPWSP------NVLASGGGTADRHIYFWNVSSGACLDSI 507
+ ++A+ + F+ ++ +
Sbjct: 65 HVDVLQAIERDAFELCLVATTS--FSGDLLFYRITREDETKKV 105
Score = 51.8 bits (122), Expect = 1e-07
Identities = 35/341 (10%), Positives = 98/341 (28%), Gaps = 55/341 (16%)
Query: 275 IDWSHFNVLAVALG---GSIYLWNGESDSNSKYIICQSPLVQELTSK---------CIQD 322
I+ F + VA G + + + +K +I + + + K +
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 131
Query: 323 NRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGA 382
+R + H + + + +L ++ + + +
Sbjct: 132 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL--QGTVESPMTPSQFATS 189
Query: 383 LAWN-TYILSSGSRCGNI-----VHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASG 436
+ + ++++G G + + N++ + +K+SP G LA
Sbjct: 190 VDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA 249
Query: 437 GNDNLLNIWSG----------VPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG 486
+ N + T S+Q H + V ++++ +
Sbjct: 250 HDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC---S 306
Query: 487 GTADRHIYFWNVSSGACLDSIDT-----KSQVCALLWNSDYKELVSAHGFAQNQLIIWKY 541
D + FW+V + + +++ + + L + L F +
Sbjct: 307 AGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD-----VKFL 361
Query: 542 PSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWK 582
+ + ++ D ++R ++
Sbjct: 362 KKGWRSGMGADLN------------ESLCCVCLDRSIRWFR 390
Score = 46.8 bits (109), Expect = 5e-06
Identities = 26/252 (10%), Positives = 69/252 (27%), Gaps = 44/252 (17%)
Query: 374 DGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEV------------ 421
HD + +++ S S G + D + D++ ++++ V
Sbjct: 11 KAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ 70
Query: 422 CGLKWSPDGRYLASGGNDNLLNIWSGVPGQHT----FSTQPIHSLSRHQAAVKAIAWCPW 477
+ + + +A+ L + T F + + + A+ W
Sbjct: 71 AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS 130
Query: 478 SPNVLAS--GGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQ 535
+ +L+ Y W A + T + L
Sbjct: 131 NDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG--------------- 175
Query: 536 LIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEKVKSKKKEIK 595
V S ++ +S + + + T+++ ++ E +
Sbjct: 176 ----------TVESPMTPSQFATSVDISER-GLIATGFNNGTVQISELSTLRPLYNFESQ 224
Query: 596 NNASKFNSMFNS 607
++ ++ S
Sbjct: 225 HSMINNSNSIRS 236
Score = 38.3 bits (87), Expect = 0.003
Identities = 29/222 (13%), Positives = 66/222 (29%), Gaps = 10/222 (4%)
Query: 233 IKILSNTSKTPMGSKPTSRYIPLTADRILDAPEIQNDYYLNLIDWSHFNVLAVALG-GSI 291
I + T + P + + + +D S ++A G++
Sbjct: 148 TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTV 207
Query: 292 YLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLG 351
+ + Q ++ S L+ + + N + E
Sbjct: 208 QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-- 265
Query: 352 VGTSLGTVQLWDVSAKKKCRTMDGHD-VRVGALAWNTYILSSGSRCGNIVHHDVRSRDHK 410
G +G++ + S++ V + + L S G + DV++++
Sbjct: 266 -GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER- 323
Query: 411 VALLQNHTQEV----CGLKWSPDGRYLASGGNDNLLNIWSGV 448
+ L H ++ L G LA G ++ + G
Sbjct: 324 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 365
Score = 33.7 bits (75), Expect = 0.067
Identities = 6/34 (17%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 550 LHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
H A + +++ +S D L++W
Sbjct: 10 GKAHDADIFSVSACNS--FTVSCSGDGYLKVWDN 41
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 56.1 bits (133), Expect = 3e-09
Identities = 37/290 (12%), Positives = 75/290 (25%), Gaps = 38/290 (13%)
Query: 332 LEG-NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTM-DGHDVRVGALAWNTYI 389
G N+ + +++ +G L + G + WD+S R D H + + +
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 67
Query: 390 -LSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGV 448
L + S ++ + + L + +
Sbjct: 68 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSH 127
Query: 449 PGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID 508
S + +A V A V
Sbjct: 128 GKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAF 187
Query: 509 TKSQVCALLWNSDYKELV---------------------------------SAHGFAQNQ 535
+ + + + K + A G N
Sbjct: 188 SNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS 247
Query: 536 LIIW--KYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
+I+W PS + H+ +N + +ETT++SAG D ++ W +
Sbjct: 248 VIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 42.7 bits (98), Expect = 7e-05
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 543 SLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
S+ +V +GH+ + L+ S D T+ SA A+ + W I
Sbjct: 3 SIDQV--RYGHNKAITALSSSADGKTLFSADAEGHINSWDI 41
Score = 40.0 bits (91), Expect = 5e-04
Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 7/115 (6%)
Query: 385 WNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNI 444
+ + SR HT +V + WSPD LA+G DN + +
Sbjct: 191 GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV 250
Query: 445 WSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS 499
W+ I + ++V ++ W + S G D +I FWNV
Sbjct: 251 WNMNKPS---DHPIIIKGAHAMSSVNSVIWLN--ETTIVSAG--QDSNIKFWNVP 298
Score = 30.3 bits (66), Expect = 0.60
Identities = 14/143 (9%), Positives = 35/143 (24%), Gaps = 39/143 (27%)
Query: 304 YIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWD 363
+++ + + + V V+W + L G+ +V +W+
Sbjct: 193 FLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWN 252
Query: 364 VSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCG 423
++ DH + + H
Sbjct: 253 MNKPS---------------------------------------DHPIIIKGAHAMSSVN 273
Query: 424 LKWSPDGRYLASGGNDNLLNIWS 446
+ + S G D+ + W+
Sbjct: 274 SVIWLNETTIVSAGQDSNIKFWN 296
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 54.4 bits (129), Expect = 2e-08
Identities = 34/263 (12%), Positives = 75/263 (28%), Gaps = 30/263 (11%)
Query: 347 GYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRS 406
+ G V+++D ++ D + ++ S + G + S
Sbjct: 68 FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL-TPDGKTLLFYQFS 126
Query: 407 RDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSG-----VPGQHTFSTQPIHS 461
V ++ + + PD ++ D V + + H+
Sbjct: 127 PAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT 186
Query: 462 LSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSID---TKSQVCALLW 518
H I +S T I+ ++SSG A W
Sbjct: 187 EVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGW 246
Query: 519 NSDYKELVS------------------AHGFAQNQLIIWKYPSLVKVAELHGHSARVLNL 560
+ V+ H A +++ + ++A+ + ++
Sbjct: 247 RPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSI 305
Query: 561 AMSPDETTVL--SAGADETLRLW 581
+S DE +L + D+TL +
Sbjct: 306 NVSQDEKPLLYALSTGDKTLYIH 328
Score = 46.7 bits (109), Expect = 4e-06
Identities = 16/172 (9%), Positives = 38/172 (22%), Gaps = 14/172 (8%)
Query: 423 GLKWSPDGRYLA----------SGGNDNLLNIWSGVPGQHTFS-TQPIHSLSRHQAAVKA 471
+ DG ++A G + + ++ V T P
Sbjct: 51 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWM 110
Query: 472 IAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGF 531
+ P L + + ++ A +D D + G
Sbjct: 111 TSLTPD-GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGS 169
Query: 532 AQNQLIIWKYPSLVKVAELH--GHSARVLNLAMSPDETTVLSAGADETLRLW 581
+ + E+ + + A S ++ +
Sbjct: 170 LAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQI 221
Score = 46.3 bits (108), Expect = 6e-06
Identities = 29/225 (12%), Positives = 62/225 (27%), Gaps = 25/225 (11%)
Query: 362 WDVSAKKKCRTMDGH-DVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQE 420
D+ K R +D + A +T+ + V H ++
Sbjct: 134 VDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPED 193
Query: 421 ---VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPW 477
+ +S L ++ G F + ++ A +A W P
Sbjct: 194 EFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKF----LPAVEALTEAERADGWRPG 249
Query: 478 SPNVLASGG-----------------GTADRHIYFWNVSSGACLDSIDTKSQVCALLWNS 520
+A TA R + + +G L + ++ ++ +
Sbjct: 250 GWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQ 309
Query: 521 DYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPD 565
D K L+ A L I S ++ ++ + +
Sbjct: 310 DEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354
Score = 42.1 bits (97), Expect = 1e-04
Identities = 20/247 (8%), Positives = 50/247 (20%), Gaps = 19/247 (7%)
Query: 351 GVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWN-TYILSSGSRCGNIVHHDVRSRDH 409
++ + D A + +DG + +A + ++I + + I R
Sbjct: 22 AHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIAR---GERTD 78
Query: 410 KVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNI-WSGVPGQHTFSTQPIHSLSRHQAA 468
V + T PD G + ++ G +
Sbjct: 79 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG 138
Query: 469 VKAIAWCPWSPNVLASGGG-------TADRHIYFWNVSSGACLDSIDTKSQ-------VC 514
D + + + T+ +
Sbjct: 139 KAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLIN 198
Query: 515 ALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGA 574
++ LV + I + + + P ++
Sbjct: 199 HPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR 258
Query: 575 DETLRLW 581
Sbjct: 259 ALDRIYL 265
Score = 30.1 bits (66), Expect = 0.79
Identities = 7/47 (14%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 332 LEGNENVCSVAWIQEG--YMLGVGTSLGTVQLWDVSAKKKCRTMDGH 376
E + S+ Q+ + + T T+ + D + ++ R+++
Sbjct: 296 FEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 342
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 53.8 bits (127), Expect = 2e-08
Identities = 23/203 (11%), Positives = 47/203 (23%), Gaps = 3/203 (1%)
Query: 244 MGSKPTSRYIPLTADRILDAPEIQNDYYLNLIDWSHFNVLAVALGGSIYLWNGESDSNSK 303
+ LT D L + + + + + + E ++
Sbjct: 86 ASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQV 145
Query: 304 YIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWD 363
+ + + +L + I + I +
Sbjct: 146 FKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT 205
Query: 364 VSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCG 423
+ + +GS NI + V+ + L H V
Sbjct: 206 SKINAISWKPAEKGANEEEIEEDLVA--TGSLDTNIFIYSVKRPMKIIKALNAHKDGVNN 263
Query: 424 LKWSPDGRYLASGGNDNLLNIWS 446
L W L S G D + W+
Sbjct: 264 LLWETPST-LVSSGADACIKRWN 285
Score = 42.3 bits (97), Expect = 1e-04
Identities = 28/247 (11%), Positives = 58/247 (23%), Gaps = 10/247 (4%)
Query: 338 VCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCG 397
+ S+ + + A + +
Sbjct: 49 IVSLDNSKAQEYSS-----ISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDL 103
Query: 398 NIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQ 457
I+ V L + + G + L+ T
Sbjct: 104 LILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA 163
Query: 458 PIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALL 517
+S + A +L + + +S S +
Sbjct: 164 KPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEE 223
Query: 518 WNSDYKELVSAHGFAQNQLIIWKYPSLVK-VAELHGHSARVLNLAMSPDETTVLSAGADE 576
+ A G + I+ +K + L+ H V NL T ++S+GAD
Sbjct: 224 EIEEDLV---ATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADA 279
Query: 577 TLRLWKI 583
++ W +
Sbjct: 280 CIKRWNV 286
Score = 38.4 bits (87), Expect = 0.002
Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 8/110 (7%)
Query: 368 KKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWS 427
+ +T+ GH+ + AL N L SGS G I+ S Q+H+ + L S
Sbjct: 4 EVLKTISGHNKGITALTVNP--LISGSYDGRIMEWSSSSM------HQDHSNLIVSLDNS 55
Query: 428 PDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPW 477
Y + +D L + + A +
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLI 105
Score = 36.9 bits (83), Expect = 0.005
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 11/65 (16%)
Query: 457 QPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCAL 516
+ + ++S H + A+ P L SG D I W+ SS D + + +L
Sbjct: 4 EVLKTISGHNKGITALTVNP-----LISGS--YDGRIMEWSSSSMHQ----DHSNLIVSL 52
Query: 517 LWNSD 521
+
Sbjct: 53 DNSKA 57
Score = 34.9 bits (78), Expect = 0.024
Identities = 17/115 (14%), Positives = 30/115 (26%), Gaps = 15/115 (13%)
Query: 408 DHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQA 467
D + + H + + L +P L SG D + WS H
Sbjct: 3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQD-----------HSN 47
Query: 468 AVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDY 522
+ ++ S T + + + A+L N D
Sbjct: 48 LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDD 102
Score = 33.8 bits (75), Expect = 0.053
Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Query: 547 VAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
+ + GH+ + L ++P ++S D + W
Sbjct: 6 LKTISGHNKGITALTVNP----LISGSYDGRIMEWSS 38
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 52.3 bits (124), Expect = 9e-08
Identities = 14/256 (5%), Positives = 44/256 (17%), Gaps = 43/256 (16%)
Query: 334 GNENVCSVAWIQEGYMLGVGTSL-GTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSS 392
V + L V +
Sbjct: 122 VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASC-FHIHPGAAATHYL 180
Query: 393 GSRCGNIV-----HHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSG 447
GS ++ + + + G + + + L
Sbjct: 181 GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPA 240
Query: 448 VPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSI 507
++ +++ KA + ++A + +
Sbjct: 241 A------GATMKAAIDGNESGRKADNFRSAGFQMVA---KLKNTDGIMILTVEHS----- 286
Query: 508 DTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDET 567
+ A + + + + D
Sbjct: 287 -------------------RSCLAAAENTSSVTASVGQTSGPI-SNGHDSDAIIAAQDGA 326
Query: 568 TVL--SAGADETLRLW 581
+ ++ E L ++
Sbjct: 327 SDNYANSAGTEVLDIY 342
Score = 40.3 bits (93), Expect = 5e-04
Identities = 17/174 (9%), Positives = 31/174 (17%), Gaps = 19/174 (10%)
Query: 423 GLKWSPDGRYLA----------SGGNDNLLNIWSGVPGQHTFST-QPIHSLSRHQAAVKA 471
G A G + + ++ V P V
Sbjct: 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHI 128
Query: 472 IAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGF 531
I C S +L G +V + + S C +
Sbjct: 129 IGNCASSACLLFFLFG--SSAAAGLSVPGASDDQLTKSAS--CFHIHPGAAATHYLGSCP 184
Query: 532 AQNQLIIW----KYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581
A +V + + V + +
Sbjct: 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDI 238
Score = 32.6 bits (73), Expect = 0.14
Identities = 13/139 (9%), Positives = 34/139 (24%), Gaps = 25/139 (17%)
Query: 338 VCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTY--------- 388
+ G ++ S + +DG++ A + +
Sbjct: 214 SQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK 273
Query: 389 ------------ILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYL--A 434
S + N + + ++ + + + DG A
Sbjct: 274 NTDGIMILTVEHSRSCLAAAENTSSVTASVG--QTSGPISNGHDSDAIIAAQDGASDNYA 331
Query: 435 SGGNDNLLNIWSGVPGQHT 453
+ +L+I+ Q
Sbjct: 332 NSAGTEVLDIYDAASDQDQ 350
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 51.4 bits (121), Expect = 2e-07
Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 51/303 (16%)
Query: 332 LEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYI 389
L G+ E + G ++++D KK + GHD V AL + +
Sbjct: 8 LRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGIL 67
Query: 390 LSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWS--- 446
+S + V + V N T + + +Y+ +G DN L++W
Sbjct: 68 VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 127
Query: 447 ----GVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGG-----GTADRHIYFWN 497
G+ H+ + V + S ++ G G+ D + W+
Sbjct: 128 ESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWD 187
Query: 498 VSSGACLDSIDTKSQVCALLWNSDYKELVSAHG--------------------------- 530
V+ CL + + ++ +
Sbjct: 188 VAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVG 247
Query: 531 ----------FAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRL 580
A I + + + H + + +L +G++ +
Sbjct: 248 LLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNI 307
Query: 581 WKI 583
+ +
Sbjct: 308 YNL 310
Score = 44.5 bits (103), Expect = 3e-05
Identities = 36/308 (11%), Positives = 80/308 (25%), Gaps = 17/308 (5%)
Query: 275 IDWSHFNVLAVALGGSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEG 334
+ ++H +L ++ N +
Sbjct: 59 LKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 335 NENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGS 394
+V + G V + GH V ++ + I+ SGS
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 395 RCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTF 454
++ DV +L HT + + + + S D + IW G+ +
Sbjct: 179 YDNTLIVWDVAQMKCL-YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 237
Query: 455 STQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVC 514
+ Q +L + ++ + +
Sbjct: 238 TLQGHTALVGLLRLSDKFLVSAAAD------------GSIRGWDANDYSRKFSYHHTNLS 285
Query: 515 ALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKV-AELHGHSARVLNLAMSPDETTVLSAG 573
A+ ++ + +NQ I+ S V A + + ++ ++ T V +
Sbjct: 286 AITTFYVSDNILVSGS--ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVE 342
Query: 574 ADETLRLW 581
D L
Sbjct: 343 KDGQSFLE 350
Score = 43.7 bits (101), Expect = 5e-05
Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 6/125 (4%)
Query: 460 HSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDT-KSQVCALLW 518
+L H +V I + N + +G D+ I ++ + L + V AL +
Sbjct: 6 TTLRGHMTSV--ITCLQFEDNYVITGA--DDKMIRVYDSINKKFLLQLSGHDGGVWALKY 61
Query: 519 NSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETL 578
LVS ++ K V E H + R L++ + +++ D TL
Sbjct: 62 AHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120
Query: 579 RLWKI 583
+WK+
Sbjct: 121 HVWKL 125
Score = 36.8 bits (83), Expect = 0.007
Identities = 5/69 (7%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 337 NVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCR-TMDGHDVRVGALAWN-TYILSSGS 394
N+ ++ + V S ++++ + K + ++ ++ + ++++
Sbjct: 283 NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVE 342
Query: 395 RCGNIVHHD 403
+ G
Sbjct: 343 KDGQSFLEI 351
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 50.9 bits (121), Expect = 3e-07
Identities = 29/238 (12%), Positives = 63/238 (26%), Gaps = 17/238 (7%)
Query: 357 GTVQLWDVSAKKKCRTMD-GHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVAL-- 413
G + L D S + +D G+ V + L+ + L R G + D+ ++
Sbjct: 42 GQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 101
Query: 414 --LQNHTQEVCGLKWSPDGRYL-ASGGNDNLLNIWSG-----VPGQHTFSTQPIHSLSRH 465
+ +Y A I G Q T
Sbjct: 102 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHP 161
Query: 466 QAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACL--DSIDTKSQVCALLWNSDYK 523
+ V AI + P + + T I + + L I + + + ++
Sbjct: 162 EPRVAAILASHYRPEFIVNVKETG--KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 219
Query: 524 ELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLW 581
++A ++ K+ + + + + T +
Sbjct: 220 YFITAANARNK--LVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG 275
Score = 44.4 bits (104), Expect = 3e-05
Identities = 26/206 (12%), Positives = 58/206 (28%), Gaps = 27/206 (13%)
Query: 406 SRDHKVALLQNHTQEV----------CGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFS 455
++AL+ T E+ + S GRYL G D +N+ + T
Sbjct: 39 RDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT- 97
Query: 456 TQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLD---------- 505
I S ++ + +A + +
Sbjct: 98 VAEIKIGSEARSIETSKMEGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQSTRGMTYD 155
Query: 506 --SIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLN-LAM 562
+ +V A+L + E + ++++ Y L + + R L+ +
Sbjct: 156 EQEYHPEPRVAAILASHYRPEFIVN-VKETGKILLVDYTDLNNLKTTEISAERFLHDGGL 214
Query: 563 SPDETTVLSAGADETLRLWKIFEKVK 588
++A + ++ K
Sbjct: 215 DGSHRYFITAANARNKLVVIDTKEGK 240
Score = 34.0 bits (77), Expect = 0.048
Identities = 28/263 (10%), Positives = 58/263 (22%), Gaps = 29/263 (11%)
Query: 338 VCSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW----------- 385
S E Y + + D + + + +
Sbjct: 111 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 170
Query: 386 ---NTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLL 442
+ + G I+ D ++ + + + RY + N
Sbjct: 171 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK 230
Query: 443 NIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGA 502
+ + + + H + P S G D +
Sbjct: 231 LVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG--DDSVALIGTDPE- 287
Query: 503 CLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAM 562
D ++ L N ++ +L AE+ G A
Sbjct: 288 --GHPDNAWKILDSFPALGGGSLFIK--THPNSQYLYVDATLNPEAEISGSVA------- 336
Query: 563 SPDETTVLSAGADETLRLWKIFE 585
D + G+D + I E
Sbjct: 337 VFDIKAMTGDGSDPEFKTLPIAE 359
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 49.5 bits (116), Expect = 5e-07
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 8/84 (9%)
Query: 414 LQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIA 473
H+ V GL WSPDG +AS D + IW+ + + ++
Sbjct: 234 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWN------VATLKVEKTIPVGTRIEDQQL 287
Query: 474 WCPWSPNVLASGGGTADRHIYFWN 497
W+ L S A+ I F N
Sbjct: 288 GIIWTKQALVSIS--ANGFINFVN 309
Score = 48.4 bits (113), Expect = 1e-06
Identities = 29/235 (12%), Positives = 60/235 (25%), Gaps = 3/235 (1%)
Query: 352 VGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAW--NTYILSSGSRCGNI-VHHDVRSRD 408
+ +V V + H + + Y +SG GN+ + ++
Sbjct: 33 QYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 92
Query: 409 HKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA 468
+ + V + W + + +A+ G + T + +
Sbjct: 93 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSV 152
Query: 469 VKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSA 528
+ + F S+ +
Sbjct: 153 DFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT 212
Query: 529 HGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKI 583
+ HS V L SPD T + SA AD+T+++W +
Sbjct: 213 IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV 267
Score = 46.0 bits (107), Expect = 6e-06
Identities = 43/277 (15%), Positives = 83/277 (29%), Gaps = 28/277 (10%)
Query: 281 NVLAVALGGSIYLWNGESDSNSK---------YIICQSPLVQELTS-------------K 318
+ + G S+Y S ++++ + SP S +
Sbjct: 30 DKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 89
Query: 319 CIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGHDV 378
+ + + + + G V L+D T +
Sbjct: 90 TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAM 149
Query: 379 RVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGN 438
+ N V + HT+ V ++++PDG AS G
Sbjct: 150 NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 209
Query: 439 DNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNV 498
D + +++GV G T + + + +AS AD+ I WNV
Sbjct: 210 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS--ADKTIKIWNV 267
Query: 499 SSGACLDSIDT----KSQVCALLWNSDYKELVSAHGF 531
++ +I + Q ++W +SA+GF
Sbjct: 268 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGF 304
Score = 42.2 bits (97), Expect = 1e-04
Identities = 13/98 (13%), Positives = 24/98 (24%), Gaps = 3/98 (3%)
Query: 509 TKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETT 568
+ L ++ +G + SL HS + SP
Sbjct: 16 ARGTAVVLGNTPAGDKIQYCNG---TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYY 72
Query: 569 VLSAGADETLRLWKIFEKVKSKKKEIKNNASKFNSMFN 606
S +R+W + K I + +
Sbjct: 73 CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW 110
Score = 39.9 bits (91), Expect = 7e-04
Identities = 10/76 (13%), Positives = 21/76 (27%)
Query: 370 CRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPD 429
V + + ++S S I +V + + + E L
Sbjct: 233 KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT 292
Query: 430 GRYLASGGNDNLLNIW 445
+ L S + +N
Sbjct: 293 KQALVSISANGFINFV 308
Score = 37.6 bits (85), Expect = 0.003
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 339 CSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMDGH---DVRVGALAWNTYILSSGSR 395
+ W +G + ++ T+++W+V+ K +T+ + + + W L S S
Sbjct: 242 FGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 301
Query: 396 CGNI 399
G I
Sbjct: 302 NGFI 305
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 49.5 bits (116), Expect = 5e-07
Identities = 29/267 (10%), Positives = 71/267 (26%), Gaps = 18/267 (6%)
Query: 333 EGNENVCSVAW--IQEGYMLGVGTSLGTVQLWDVSAKKKCRTM--------DGHDVRVGA 382
G+ V +V + I+ L G G V +W + K+ ++ +
Sbjct: 61 HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISD 120
Query: 383 LAWN---TYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND 439
++W+ + G N + + + H+Q + + D
Sbjct: 121 ISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD 180
Query: 440 NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVS 499
+ ++ P ++ H + +
Sbjct: 181 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 240
Query: 500 SGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS--LVKVAELHGHSARV 557
D + L D ++ + A + +W + V+ L
Sbjct: 241 LKYIEDDQEPVQGGIFALSWLDSQKFATVG--ADATIRVWDVTTSKCVQKWTLDKQQLGN 298
Query: 558 LNLAMSPD-ETTVLSAGADETLRLWKI 583
+ + ++S D TL +++
Sbjct: 299 QQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 42.2 bits (97), Expect = 1e-04
Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 16/144 (11%)
Query: 421 VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQ-AAVKAIAWCPW-S 478
L + P +A + P+ + H + V + + P
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDS---KVPPVVQFTGHGSSVVTTVKFSPIKG 76
Query: 479 PNVLASGGGTADRHIYFWNVSSGACLDSIDT---------KSQVCALLWNSDYKELVSAH 529
L SG + W + +S++ + + W+ + + L
Sbjct: 77 SQYLCSGD--ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134
Query: 530 GFAQNQLIIWKYPSLVKVAELHGH 553
N + + S + E+ GH
Sbjct: 135 EGRDNFGVFISWDSGNSLGEVSGH 158
Score = 32.2 bits (71), Expect = 0.18
Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 5/121 (4%)
Query: 289 GSIYLWNGESDSNSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGY 348
GS S + +++I + D E + +
Sbjct: 205 GSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQ 264
Query: 349 MLGVGTSLGTVQLWDVSAKKKCRTMDGH-----DVRVGALAWNTYILSSGSRCGNIVHHD 403
+ T+++WDV+ K + + +VG +A + S S G + ++
Sbjct: 265 KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Query: 404 V 404
+
Sbjct: 325 L 325
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 46.9 bits (110), Expect = 3e-06
Identities = 10/176 (5%), Positives = 33/176 (18%), Gaps = 23/176 (13%)
Query: 423 GLKWSPDGRYLA----------SGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI 472
G +PD + G +++ I + + +
Sbjct: 21 GFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTL------DHAGEIVIPAKHAQHV 74
Query: 473 AWCPWSPN---VLASGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAH 529
+ + + + + + C L + + +
Sbjct: 75 PSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALC 134
Query: 530 GFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPD----ETTVLSAGADETLRLW 581
+ + + V + + L +R
Sbjct: 135 ESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSA 190
Score = 40.7 bits (94), Expect = 3e-04
Identities = 14/263 (5%), Positives = 46/263 (17%), Gaps = 50/263 (19%)
Query: 353 GTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVA 412
GT V++ D + + + ++ S
Sbjct: 44 GTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPY--NTAFSA----------------- 84
Query: 413 LLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAI 472
DG+ L ++ ++ +
Sbjct: 85 ----------------DGKRLYVANITPAASVTVIDAVSKKMLSEI--------DTAACV 120
Query: 473 AWCPWSPNVLASGGGTADRHIYFWNVSSGACL----DSIDTKSQVCALLWNSDYKELVSA 528
P + + + + + ++G N+ +
Sbjct: 121 LAYPAGDDRFTALCES-GKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYL 179
Query: 529 HGFAQNQLIIWKYPS--LVKVAELHGHSARVLNLAMSPDETTVLSAGADETLRLWKIFEK 586
+ + + P + A + + +
Sbjct: 180 FTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKG 239
Query: 587 VKSKKKEIKNNASKFNSMFNSIR 609
K+ ++
Sbjct: 240 TDGSHKDPGTQVWVYDLKSKQRV 262
Score = 33.8 bits (76), Expect = 0.057
Identities = 16/149 (10%), Positives = 33/149 (22%), Gaps = 35/149 (23%)
Query: 352 VGTSLGTVQLWDVSAKKKC--RTMDGHDVRVGALAW-------------NTYILSSGSRC 396
T G V+ D S K + A W +
Sbjct: 180 FTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKG 239
Query: 397 GNIVHHD-------VRSRDHKVALLQNHTQEVC----GLKWSPDGRYL--ASGGNDNLLN 443
+ H D + + + Q+ ++ S D + L +L+
Sbjct: 240 TDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVSIQVSEDDKPLFYGLTATSDLV- 298
Query: 444 IWSGVPGQHTFSTQPIHSLSRHQAAVKAI 472
+ + H + +
Sbjct: 299 VMD------ARTGALQHVEKQIGNTSSLL 321
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 46.4 bits (108), Expect = 5e-06
Identities = 27/252 (10%), Positives = 66/252 (26%), Gaps = 10/252 (3%)
Query: 332 LEGNENVCSVAWIQEG-YMLGVGTSLGTVQLWDVSAKKKCRTMDGHDVRVGALAWNTYIL 390
+ N +G + V + D + T+ G
Sbjct: 28 IPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQ 87
Query: 391 SSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPG 450
+ + + + + VA + GL SPDG+ L N +
Sbjct: 88 VYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147
Query: 451 QHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSIDTK 510
+ +T + + A + I + + + +D++ +
Sbjct: 148 KAVINTVSVGRSPKGIAVTPDGTKVYVANFD--------SMSISVIDTVTNSVIDTVKVE 199
Query: 511 SQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSPDETTVL 570
+ + N + + + + K+ +A++PD V
Sbjct: 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVY 259
Query: 571 -SAGADETLRLW 581
+ T+ +
Sbjct: 260 VALSFCNTVSVI 271
Score = 33.3 bits (74), Expect = 0.077
Identities = 11/146 (7%), Positives = 44/146 (30%), Gaps = 1/146 (0%)
Query: 301 NSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQ 360
+ K + + + ++ I+ + + + + Y+ + +V
Sbjct: 126 DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVI 185
Query: 361 LWDVSAKKKCRTMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQE 420
++ ++ + T + + + +K+ +
Sbjct: 186 DTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD 245
Query: 421 VCGLKWSPDGRYL-ASGGNDNLLNIW 445
G+ +PDG+ + + N +++
Sbjct: 246 PAGIAVTPDGKKVYVALSFCNTVSVI 271
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 43.8 bits (102), Expect = 4e-05
Identities = 24/203 (11%), Positives = 55/203 (27%), Gaps = 13/203 (6%)
Query: 380 VGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLASGGND 439
+ L + G I D S+ K+ + + V + S GRYL G D
Sbjct: 25 LNDLDLPNLFSVTLRDAGQIALVDGDSK--KIVKVIDTGYAVHISRMSASGRYLLVIGRD 82
Query: 440 NLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNV- 498
+++ + T I ++ + +A I
Sbjct: 83 ARIDMIDLWAKEPT-KVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 141
Query: 499 ---------SSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPSLVKVAE 549
+ + +V A++ + ++ E + L++
Sbjct: 142 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201
Query: 550 LHGHSARVLNLAMSPDETTVLSA 572
G + + + ++A
Sbjct: 202 SIGAAPFLADGGWDSSHRYFMTA 224
Score = 29.2 bits (64), Expect = 1.7
Identities = 29/287 (10%), Positives = 68/287 (23%), Gaps = 40/287 (13%)
Query: 332 LEGNENVCSVAWIQEGYMLGVGTSLGTVQLWDVSAKKKCRTMD-GHDVRVGALAWNTYI- 389
++ V G L V + + D+ AK+ + + + ++ + +
Sbjct: 58 IDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKG 117
Query: 390 -----LSSGSRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGR------------- 431
+G+ ++ V + P+ R
Sbjct: 118 YEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 177
Query: 432 YLASGGNDNLLNIWSGVPGQHTFSTQPIH--------SLSRHQAAVKAIAWCPWSPNVLA 483
+ +L + T ++ S A +
Sbjct: 178 IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSK 237
Query: 484 SGGGTADRHIYFWNVSSGACLDSIDTKSQVCALLWNSDYKELVSAHGFAQNQLIIWKYPS 543
+A + V + D + + WK
Sbjct: 238 DRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWK--- 294
Query: 544 LVKVAELHGHSARVLNLAMSPDETTVL-------SAGADETLRLWKI 583
KVAEL G L + P + + A +++ ++ +
Sbjct: 295 --KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 339
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 37.4 bits (85), Expect = 0.004
Identities = 17/139 (12%), Positives = 48/139 (34%), Gaps = 8/139 (5%)
Query: 394 SRCGNIVHHDVRSRDHKVALLQNHTQEVCGLKWSPDGRYLA------SGGNDNLLNIWSG 447
C ++ HD++S + + ++ + ++ PDGR +A S N L ++G
Sbjct: 18 VCCDDLWEHDLKSGSTR--KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG 75
Query: 448 VPGQHTFSTQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGACLDSI 507
G+ T + + + P ++++ + ++ +
Sbjct: 76 ENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFV 135
Query: 508 DTKSQVCALLWNSDYKELV 526
+ +D + ++
Sbjct: 136 PLNLGPATHILFADGRRVI 154
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 32.9 bits (73), Expect = 0.10
Identities = 20/179 (11%), Positives = 48/179 (26%), Gaps = 7/179 (3%)
Query: 301 NSKYIICQSPLVQELTSKCIQDNRAIDHLMDLEGNENVCSVAWIQEGYMLGVGTSLGTVQ 360
+ + L + + + N + + G Q
Sbjct: 93 DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQ 152
Query: 361 LWDVSAKKKCRT---MDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNH 417
++ V+ +G + ++ + + S G H + + +
Sbjct: 153 VYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS 212
Query: 418 TQEVCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAAVKAIAWCP 476
T +P+G + + + ++ + V F + L VK AW P
Sbjct: 213 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR----LPATDGQVKFPAWSP 267
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 32.1 bits (71), Expect = 0.18
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Query: 372 TMDGHDVRVGALAWNTYILSSGSRCGNIVHHDVRSRDHKVALLQNHT---QEVCGLKWSP 428
D + + L + R +++ S D V + + G
Sbjct: 226 FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDH 285
Query: 429 DGRYL-ASGGNDNLLNIWS 446
G+YL A+G + ++++
Sbjct: 286 SGKYLIAAGQKSHHISVYE 304
Score = 29.0 bits (63), Expect = 1.7
Identities = 9/61 (14%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 410 KVALLQNHTQEVCGLKWSPDGRYL-ASGGNDNLLNIWSGVPGQHTFSTQPIHSLSRHQAA 468
+ + + +V + SPD RYL + + + P + +L
Sbjct: 28 TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTH 87
Query: 469 V 469
+
Sbjct: 88 I 88
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 29.9 bits (66), Expect = 0.83
Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 7/142 (4%)
Query: 397 GNIVHHDVRSRDHKVALLQNHTQE---VCGLKWSPDGRYLASGGNDNLLNIWSGVPGQHT 453
G + +V + V L++ E + SPD Y N + S
Sbjct: 37 GTVRLWNVETNTSTV-LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95
Query: 454 F--STQPIHSLSRHQAAVKAIAWCPWSPNVLASGGGTADRHIYFWNVSSGAC-LDSIDTK 510
SL + + + + W P + Y +V A + S +
Sbjct: 96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKE 155
Query: 511 SQVCALLWNSDYKELVSAHGFA 532
+ L + Y+E + A
Sbjct: 156 GVIYNGLSDWLYEEEILKTHIA 177
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 29.7 bits (66), Expect = 1.2
Identities = 10/51 (19%), Positives = 24/51 (47%)
Query: 24 PLPRWQRKNKENSSVEMNMSNFNSSNSMSSSDLNKSRGNEERKRSQSVGRK 74
+ + KNK+ ++ S +SS+ + +R + +KR ++ G +
Sbjct: 507 DVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPTRPEDSKKRPETAGSQ 557
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 28.2 bits (61), Expect = 3.7
Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Query: 397 GNIVHHDVRSRDHKVAL----LQNHTQEVCGLKWSPDGRYLASGGNDN 440
NI+ + + V L + SPDG+++ N
Sbjct: 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYV 83
>d1vjfa_ d.116.1.1 (A:) Hypothetical protein CC0111 {Caulobacter
crescentus [TaxId: 155892]}
Length = 168
Score = 26.2 bits (57), Expect = 7.8
Identities = 5/41 (12%), Positives = 12/41 (29%)
Query: 524 ELVSAHGFAQNQLIIWKYPSLVKVAELHGHSARVLNLAMSP 564
+ V+ H + L + G +++ A
Sbjct: 125 DPVNFHPLKNDATTAVSQAGLRRFLAALGVEPMIVDFAAME 165
>d1lwma_ a.21.1.1 (A:) NHP6a {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 93
Score = 25.2 bits (55), Expect = 9.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 74 KTPKTPKKSPGRHKSNPNTP 93
TP+ PKK R K +PN P
Sbjct: 2 VTPREPKKRTTRKKKDPNAP 21
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.129 0.390
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,179,317
Number of extensions: 98132
Number of successful extensions: 525
Number of sequences better than 10.0: 1
Number of HSP's gapped: 401
Number of HSP's successfully gapped: 137
Length of query: 609
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 518
Effective length of database: 1,158,166
Effective search space: 599929988
Effective search space used: 599929988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.3 bits)