Your job contains 1 sequence.
>psy488
MDVDRTSSRSDEEIAAEMREKFLKAMSSLSGQPCTINMFERTVVTAEFQGTNSDLTEFYV
RNLKTPIGTFHEHALLRVDDIVDIEI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy488
(86 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1916981 - symbol:Gemin7 "gem (nuclear organelle) ... 138 1.8e-09 1
RGD|1597035 - symbol:Gemin7 "gem (nuclear organelle) asso... 137 2.2e-09 1
UNIPROTKB|E2RHG3 - symbol:GEMIN7 "Uncharacterized protein... 132 7.6e-09 1
UNIPROTKB|Q17QA0 - symbol:GEMIN7 "Gem-associated protein ... 131 9.7e-09 1
UNIPROTKB|I3LCH5 - symbol:GEMIN7 "Uncharacterized protein... 131 9.7e-09 1
UNIPROTKB|Q9H840 - symbol:GEMIN7 "Gem-associated protein ... 126 3.3e-08 1
WB|WBGene00007702 - symbol:C24H11.5 species:6239 "Caenorh... 107 3.4e-06 1
>MGI|MGI:1916981 [details] [associations]
symbol:Gemin7 "gem (nuclear organelle) associated protein 7"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016604 "nuclear body" evidence=ISO] [GO:0032797
"SMN complex" evidence=IEA] InterPro:IPR020338 Pfam:PF11095
ProDom:PD296126 MGI:MGI:1916981 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0005681 GO:GO:0015030 GO:GO:0016604 CTD:79760
eggNOG:NOG40574 GeneTree:ENSGT00390000018039 HOGENOM:HOG000112710
HOVERGEN:HBG051723 KO:K13135 OMA:TLHEGVH OrthoDB:EOG470TJR
GO:GO:0032797 EMBL:AK010303 EMBL:BC028527 IPI:IPI00109808
RefSeq:NP_081465.1 UniGene:Mm.24540 ProteinModelPortal:Q9CWY4
SMR:Q9CWY4 IntAct:Q9CWY4 MINT:MINT-218552 STRING:Q9CWY4
PhosphoSite:Q9CWY4 PRIDE:Q9CWY4 Ensembl:ENSMUST00000051364
Ensembl:ENSMUST00000117222 Ensembl:ENSMUST00000119912
Ensembl:ENSMUST00000122055 Ensembl:ENSMUST00000122127 GeneID:69731
KEGG:mmu:69731 UCSC:uc009fmi.1 InParanoid:Q9CWY4 NextBio:330206
Bgee:Q9CWY4 CleanEx:MM_GEMIN7 Genevestigator:Q9CWY4
GermOnline:ENSMUSG00000044709 Uniprot:Q9CWY4
Length = 129
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 10 SDEEIA-AEMREKFLKAMSSLSGQPCTINMFERTVVTAEFQGTNSDLTEFYVRNLKTPIG 68
S E+ A A +RE++L+++ ++ G P + + E VTA+F T+ D+ FYV L+TPIG
Sbjct: 51 SQEQRARATLRERYLRSLLAMVGHPVSFTLHEGVHVTAQFGATDLDVANFYVSQLQTPIG 110
Query: 69 TFHEHALLRVDDIV 82
E ALLR DI+
Sbjct: 111 VQAE-ALLRCSDII 123
>RGD|1597035 [details] [associations]
symbol:Gemin7 "gem (nuclear organelle) associated protein 7"
species:10116 "Rattus norvegicus" [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016604
"nuclear body" evidence=ISO] [GO:0032797 "SMN complex"
evidence=IEA] IPI:IPI00957252 Ensembl:ENSRNOT00000040934
RGD:1597035 GeneTree:ENSGT00390000018039 GO:GO:0005737
GO:GO:0016604 GO:GO:0032797 InterPro:IPR020338 Pfam:PF11095
ProDom:PD296126 Uniprot:F1M629
Length = 132
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 10 SDEEIA-AEMREKFLKAMSSLSGQPCTINMFERTVVTAEFQGTNSDLTEFYVRNLKTPIG 68
S E+ A A +RE++L+++ ++ G P + + E VTA+F T+ D+ FYV L+TPIG
Sbjct: 54 SQEQRARAVLRERYLRSLLAMVGHPVSFTLHEGVHVTAQFGATDLDVANFYVSQLQTPIG 113
Query: 69 TFHEHALLRVDDIV 82
E ALLR DI+
Sbjct: 114 VQAE-ALLRCSDII 126
>UNIPROTKB|E2RHG3 [details] [associations]
symbol:GEMIN7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016604 "nuclear body" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] InterPro:IPR020338 Pfam:PF11095 ProDom:PD296126
GO:GO:0005737 GO:GO:0016604 GeneTree:ENSGT00390000018039 KO:K13135
OMA:TLHEGVH GO:GO:0032797 EMBL:AAEX03000889 RefSeq:XP_003638874.1
ProteinModelPortal:E2RHG3 Ensembl:ENSCAFT00000007368
GeneID:100855650 KEGG:cfa:100855650 NextBio:20897851 Uniprot:E2RHG3
Length = 131
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 3 VDRTSSRSDEEIAAEMREKFLKAMSSLSGQPCTINMFERTVVTAEFQGTNSDLTEFYVRN 62
V + +++ A +RE++L+++ ++ G + + E VTA F T+ D+ FYV
Sbjct: 47 VQESRESQEQQARAALRERYLRSLLAMVGHQVSFTLHEGVHVTAHFGATDLDVANFYVSQ 106
Query: 63 LKTPIGTFHEHALLRVDDIV 82
L+TPIG E ALLR DI+
Sbjct: 107 LQTPIGVQAE-ALLRCSDII 125
>UNIPROTKB|Q17QA0 [details] [associations]
symbol:GEMIN7 "Gem-associated protein 7" species:9913 "Bos
taurus" [GO:0015030 "Cajal body" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] InterPro:IPR020338 Pfam:PF11095 ProDom:PD296126
GO:GO:0005737 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0015030 InterPro:IPR024642 Pfam:PF12901 EMBL:BC118472
IPI:IPI00695407 RefSeq:NP_001069957.1 UniGene:Bt.41223
ProteinModelPortal:Q17QA0 SMR:Q17QA0 STRING:Q17QA0
Ensembl:ENSBTAT00000014112 GeneID:618024 KEGG:bta:618024 CTD:79760
eggNOG:NOG40574 GeneTree:ENSGT00390000018039 HOGENOM:HOG000112710
HOVERGEN:HBG051723 InParanoid:Q17QA0 KO:K13135 OMA:TLHEGVH
OrthoDB:EOG470TJR NextBio:20900957 GO:GO:0032797 Uniprot:Q17QA0
Length = 125
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 11 DEEIAAEMREKFLKAMSSLSGQPCTINMFERTVVTAEFQGTNSDLTEFYVRNLKTPIGTF 70
+++ A +RE++L+++ ++ G+P + E V A F T+ D+ FYV L+TPIG
Sbjct: 49 EQQARASLRERYLRSLLAMVGRPVCFTLHEGVQVIAHFGATDLDVANFYVSQLQTPIGIQ 108
Query: 71 HEHALLRVDDIV 82
E ALLR DI+
Sbjct: 109 AE-ALLRCSDII 119
>UNIPROTKB|I3LCH5 [details] [associations]
symbol:GEMIN7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016604 "nuclear body" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA]
InterPro:IPR020338 Pfam:PF11095 ProDom:PD296126 GO:GO:0005737
GO:GO:0016604 GeneTree:ENSGT00390000018039 KO:K13135 OMA:TLHEGVH
GO:GO:0032797 RefSeq:XP_003360710.1 Ensembl:ENSSSCT00000022742
GeneID:100627643 KEGG:ssc:100627643 Uniprot:I3LCH5
Length = 115
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 11 DEEIAAEMREKFLKAMSSLSGQPCTINMFERTVVTAEFQGTNSDLTEFYVRNLKTPIGTF 70
+++ A +RE++L+++ ++ G+ + + E VTA F T+ D+ FYV L+TPIG
Sbjct: 39 EQQARAALRERYLRSLLAMVGRQVSFTLHEGVQVTAHFGATDLDVANFYVSQLQTPIGVQ 98
Query: 71 HEHALLRVDDIV 82
E ALLR DI+
Sbjct: 99 AE-ALLRCSDII 109
>UNIPROTKB|Q9H840 [details] [associations]
symbol:GEMIN7 "Gem-associated protein 7" species:9606 "Homo
sapiens" [GO:0032797 "SMN complex" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000387 "spliceosomal snRNP assembly" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0034660
"ncRNA metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR020338 Pfam:PF11095
ProDom:PD296126 GO:GO:0005829 EMBL:CH471126 GO:GO:0005681
GO:GO:0015030 GO:GO:0000387 GO:GO:0034660 GO:GO:0016604 PDB:1Y96
PDBsum:1Y96 CTD:79760 eggNOG:NOG40574 HOGENOM:HOG000112710
HOVERGEN:HBG051723 KO:K13135 OMA:TLHEGVH OrthoDB:EOG470TJR
GO:GO:0032797 EMBL:AY114106 EMBL:AK024018 EMBL:CR457321
EMBL:BC007793 IPI:IPI00003027 RefSeq:NP_001007270.1
RefSeq:NP_001007271.1 RefSeq:NP_078983.1 UniGene:Hs.466919
ProteinModelPortal:Q9H840 SMR:Q9H840 DIP:DIP-41750N IntAct:Q9H840
MINT:MINT-240374 STRING:Q9H840 PhosphoSite:Q9H840 DMDM:34922127
PaxDb:Q9H840 PeptideAtlas:Q9H840 PRIDE:Q9H840
Ensembl:ENST00000270257 Ensembl:ENST00000391951 GeneID:79760
KEGG:hsa:79760 UCSC:uc002pap.1 GeneCards:GC19P045582
HGNC:HGNC:20045 MIM:607419 neXtProt:NX_Q9H840 PharmGKB:PA134959810
InParanoid:Q9H840 PhylomeDB:Q9H840 EvolutionaryTrace:Q9H840
GenomeRNAi:79760 NextBio:69225 Bgee:Q9H840 CleanEx:HS_GEMIN7
Genevestigator:Q9H840 GermOnline:ENSG00000142252 Uniprot:Q9H840
Length = 131
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 3 VDRTSSRSDEEIA-AEMREKFLKAMSSLSGQPCTINMFERTVVTAEFQGTNSDLTEFYVR 61
+ + S S E+ A A +RE++L+++ ++ G + + E V A F T+ D+ FYV
Sbjct: 46 IAQESLESQEQRARAALRERYLRSLLAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVS 105
Query: 62 NLKTPIGTFHEHALLRVDDIV 82
L+TPIG E ALLR DI+
Sbjct: 106 QLQTPIGVQAE-ALLRCSDII 125
>WB|WBGene00007702 [details] [associations]
symbol:C24H11.5 species:6239 "Caenorhabditis elegans"
[GO:0032797 "SMN complex" evidence=IEA] InterPro:IPR020338
Pfam:PF11095 ProDom:PD296126 KO:K13135 GO:GO:0032797 EMBL:Z81475
RefSeq:NP_001122676.1 UniGene:Cel.10809 ProteinModelPortal:A7LPI7
SMR:A7LPI7 PaxDb:A7LPI7 EnsemblMetazoa:C24H11.5b GeneID:176610
KEGG:cel:CELE_C24H11.5 UCSC:C24H11.5b CTD:176610 WormBase:C24H11.5b
eggNOG:NOG318940 InParanoid:A7LPI7 OMA:MHERTEV NextBio:893288
ArrayExpress:A7LPI7 Uniprot:A7LPI7
Length = 92
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 27/69 (39%), Positives = 35/69 (50%)
Query: 16 AEMREKFLKAMSSLSGQPCTINMFERTVVTAEFQGTNSDLTEFYVRNLKTPIGTFHEHAL 75
A +RE++L + + +P TI M ERT VTA + V L TPIG + A
Sbjct: 17 AVLRERYLSFLQKSADKPATIEMCERTTVTATIKAFQPSSEHVIVEKLATPIGIL-DKAA 75
Query: 76 LRVDDIVDI 84
LR DIV I
Sbjct: 76 LRSTDIVKI 84
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 86 86 0.00091 102 3 11 22 0.43 29
29 0.47 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 500 (53 KB)
Total size of DFA: 89 KB (2066 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.88u 0.11s 9.99t Elapsed: 00:00:07
Total cpu time: 9.88u 0.11s 9.99t Elapsed: 00:00:08
Start: Thu Aug 15 15:04:22 2013 End: Thu Aug 15 15:04:30 2013