BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4885
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2
Length = 3898
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 153/214 (71%), Gaps = 29/214 (13%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDAS 60
+E E LASR++E+GP+GA+FLGPVI+E+PHFA+LR KEREL++LRS++G +WKEH D +
Sbjct: 1021 VEGEGLASRLIEVGPSGAQFLGPVIVEIPHFAALRGKERELVVLRSENGDSWKEHFCDYT 1080
Query: 61 EEAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAVGPEGGV- 119
E+ + E+LN E L EDL RI RI+T DFPQYFAVVSR++Q+ + +GPEGGV
Sbjct: 1081 EDELNEILNGM--DEVLDSPEDLEKKRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVL 1138
Query: 120 --------------------------AQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHK 153
AQP+ SELV K+LGN+ SPIV++EPRRRKFHK
Sbjct: 1139 SSTVVSQVQAVFPEGALTKRIRVGLQAQPMHSELVKKILGNKATFSPIVTLEPRRRKFHK 1198
Query: 154 PITLTIPLPQAANKGMINQYSGNAPTLRLLCSIT 187
PIT+TIP+P+A++ M+N + G+APTLRLLCSIT
Sbjct: 1199 PITMTIPVPKASSDVMLNGFGGDAPTLRLLCSIT 1232
>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4
Length = 3957
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 150/213 (70%), Gaps = 29/213 (13%)
Query: 2 ESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDASE 61
E E+L SRIL+LGP G KFLGPVI+E+PHFA+LR KEREL++LRS++G +WKEH D +E
Sbjct: 1055 EGESLVSRILQLGPPGTKFLGPVIVEIPHFAALRGKERELVVLRSENGDSWKEHFCDYTE 1114
Query: 62 EAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAVGPEGGV-- 119
+ + E+LN E L EDL RI RI+T DFPQYFAVVSR++Q+ + +GPEGGV
Sbjct: 1115 DELNEILNGM--DEVLDSPEDLEKKRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVLS 1172
Query: 120 -------------------------AQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHKP 154
AQP+ SELV K+LGN+ SPIV++EPRRRKFHKP
Sbjct: 1173 STVVPQVQAVFPEGALTKRIRVGLQAQPMHSELVKKILGNKATFSPIVTLEPRRRKFHKP 1232
Query: 155 ITLTIPLPQAANKGMINQYSGNAPTLRLLCSIT 187
IT+TIP+P+A++ M+N + G+APTLRLLCSIT
Sbjct: 1233 ITMTIPVPKASSDVMLNGFGGDAPTLRLLCSIT 1265
>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1
Length = 1961
Score = 237 bits (605), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 150/215 (69%), Gaps = 30/215 (13%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDAS 60
+E E LASR++E+GPAGA+FLGPVI+E+PHF S+R KERELI+LRS++G TWKEH+ D+
Sbjct: 1038 VEGEGLASRLVEMGPAGAQFLGPVIVEIPHFGSMRGKERELIVLRSENGETWKEHQFDSK 1097
Query: 61 EEAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAVGPEGGV- 119
E + E+LN EEL E+L T RI RI+T DFPQYFAVVSR++QE + +GPEGG+
Sbjct: 1098 NEDLAELLNGM--DEELDSPEELGTKRICRIITKDFPQYFAVVSRIKQESNQIGPEGGIL 1155
Query: 120 --------------------------AQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHK 153
AQP+P E V K+LGN+ SPIV++EPRRRKFHK
Sbjct: 1156 SSTTVPLVQASFPEGALTKRIRVGLQAQPVPEETVKKILGNKATFSPIVTVEPRRRKFHK 1215
Query: 154 PITLTIPLPQAANKGMINQYSGNA-PTLRLLCSIT 187
PIT+TIP+P + +G+ N Y G+A P LRLLCSIT
Sbjct: 1216 PITMTIPVPPPSGEGVSNGYKGDATPNLRLLCSIT 1250
>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3
Length = 4377
Score = 236 bits (603), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 149/215 (69%), Gaps = 30/215 (13%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDAS 60
+E E LASR++E+GPAGA+FLGPVI+E+PHF S+R KERELI+LRS++G TWKEH+ D+
Sbjct: 1037 VEGEGLASRLVEMGPAGAQFLGPVIVEIPHFGSMRGKERELIVLRSENGETWKEHQFDSK 1096
Query: 61 EEAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAVGPEGGV- 119
E + E+LN EEL E+L RI RI+T DFPQYFAVVSR++QE + +GPEGG+
Sbjct: 1097 NEDLTELLNGM--DEELDSPEELGKKRICRIITKDFPQYFAVVSRIKQESNQIGPEGGIL 1154
Query: 120 --------------------------AQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHK 153
AQP+P E+V K+LGN+ SPIV++EPRRRKFHK
Sbjct: 1155 SSTTVPLVQASFPEGALTKRIRVGLQAQPVPDEIVKKILGNKATFSPIVTVEPRRRKFHK 1214
Query: 154 PITLTIPLPQAANKGMINQYSGN-APTLRLLCSIT 187
PIT+TIP+P + +G+ N Y G+ P LRLLCSIT
Sbjct: 1215 PITMTIPVPPPSGEGVSNGYKGDTTPNLRLLCSIT 1249
>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2
Length = 1862
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 131/212 (61%), Gaps = 29/212 (13%)
Query: 2 ESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDASE 61
E E LASRI+ LGP GA+FL PVI+E+PHFAS +REL++LRS++GS WKEHK E
Sbjct: 963 EEEGLASRIIALGPTGAQFLSPVIVEIPHFASHGRGDRELVVLRSENGSVWKEHKSRYGE 1022
Query: 62 EAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAVGPEGGV-- 119
+ ++LN EEL LE+L R+ RI+T DFP YF ++SRL Q+ +GPEGG
Sbjct: 1023 SYLDQILNGM--DEELGSLEELEKKRVCRIITTDFPLYFVIMSRLCQDYDTIGPEGGSLR 1080
Query: 120 -------------------------AQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHKP 154
AQP+P ELVTKLLGN+ SPIV++EPRRRKFH+P
Sbjct: 1081 SKLVPLVQATFPENAVTKKVKLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRP 1140
Query: 155 ITLTIPLPQAANKGMINQYSGNAPTLRLLCSI 186
I L IPLP + + G+ +LRLLCS+
Sbjct: 1141 IGLRIPLPPSWTDNPRDSGEGDTTSLRLLCSV 1172
>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3
Length = 1881
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 29/212 (13%)
Query: 2 ESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDASE 61
E E LASRI+ LGP GA+FL PVI+E+PHFAS +REL++LRS++GS WKEH+ E
Sbjct: 967 EEEGLASRIIALGPTGAQFLSPVIVEIPHFASHGRGDRELVVLRSENGSVWKEHRSRYGE 1026
Query: 62 EAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAVGPEGGV-- 119
+ ++LN EEL LE+L R+ RI+T DFP YF ++SRL Q+ +GPEGG
Sbjct: 1027 SYLDQILNGM--DEELGSLEELEKKRVCRIITTDFPLYFVIMSRLCQDYDTIGPEGGSLK 1084
Query: 120 -------------------------AQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHKP 154
AQP+P ELVTKLLGN+ SPIV++EPRRRKFH+P
Sbjct: 1085 SKLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRP 1144
Query: 155 ITLTIPLPQAANKGMINQYSGNAPTLRLLCSI 186
I L IPLP + + G+ +LRLLCS+
Sbjct: 1145 IGLRIPLPPSWTDNPRDSGEGDTTSLRLLCSV 1176
>sp|O97758|ZO1_CANFA Tight junction protein ZO-1 OS=Canis familiaris GN=TJP1 PE=1 SV=1
Length = 1769
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 4 EALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSD----DGSTWK 53
E L S ++ GP G KFL PV + +PH AS+ + SD D TW+
Sbjct: 1692 ETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKTWQ 1745
>sp|P24428|CLPC_MYCLE Probable ATP-dependent Clp protease ATP-binding subunit
OS=Mycobacterium leprae (strain TN) GN=clpC PE=3 SV=2
Length = 848
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 32 ASLRNKERELIILRSDDGSTWKEHKLD----ASEEAVQEVLNESFPGEELRQLEDLHTSR 87
ASLR++E++L+ R++ W+ LD +E + EVL ++ G + +L + T+R
Sbjct: 448 ASLRDREKQLVAQRAEREKQWRSGDLDVIAEVDDEQIAEVLG-NWTGIPVFKLTEAETTR 506
Query: 88 IVRI 91
++R+
Sbjct: 507 LLRM 510
>sp|Q7SAJ6|CHO2_NEUCR Phosphatidylethanolamine N-methyltransferase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=cho2 PE=3 SV=1
Length = 965
Score = 32.0 bits (71), Expect = 2.7, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 17 GAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDASEEAVQEVL----NESF 72
A+F VI+E PH N + + S+ GS +E ASE +V N
Sbjct: 318 AAQFAFLVIVENPHIEKTYNPPQPRVRCESEAGSQLQEF---ASEYSVPSTTGRHDNTPL 374
Query: 73 PGEELRQLEDLHTSRIVRILTVDFPQYFAVVS 104
P L L++L RI + V Y AVV+
Sbjct: 375 PVHNLIGLKNLDFFRITDVAIVLLCAYLAVVT 406
>sp|P0A522|CLPC_MYCTU Probable ATP-dependent Clp protease ATP-binding subunit
OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1
Length = 848
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 32 ASLRNKERELIILRSDDGSTWKEHKLD----ASEEAVQEVLNESFPGEELRQLEDLHTSR 87
ASLR++E+ L+ R++ W+ LD +E + EVL ++ G + +L + T+R
Sbjct: 448 ASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLG-NWTGIPVFKLTEAETTR 506
Query: 88 IVRI 91
++R+
Sbjct: 507 LLRM 510
>sp|P0A523|CLPC_MYCBO Probable ATP-dependent Clp protease ATP-binding subunit
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=clpC PE=3 SV=1
Length = 848
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 32 ASLRNKERELIILRSDDGSTWKEHKLD----ASEEAVQEVLNESFPGEELRQLEDLHTSR 87
ASLR++E+ L+ R++ W+ LD +E + EVL ++ G + +L + T+R
Sbjct: 448 ASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLG-NWTGIPVFKLTEAETTR 506
Query: 88 IVRI 91
++R+
Sbjct: 507 LLRM 510
>sp|Q8JGT4|UNC5B_XENLA Netrin receptor UNC5B OS=Xenopus laevis GN=unc5b PE=2 SV=1
Length = 943
Score = 31.6 bits (70), Expect = 3.5, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 3 SEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKE 54
++ + S I+ GP G PVI+ VPH A + + L + W+E
Sbjct: 596 TQTILSPIITCGPTGLLLCKPVILTVPHCADINTSDWILQLKTQSHQGNWEE 647
>sp|A1KXM5|SPERT_CHICK Spermatid-associated protein OS=Gallus gallus GN=SPERT PE=2 SV=1
Length = 328
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 58 DASEEAVQEVLNES-------FPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEI 110
DA EE+ N++ E L+ L+DL+ +I+R+ + +S R+ +
Sbjct: 210 DAKEESTTPTQNDTKIAPSTEDDNEILQALQDLY--QILRVFLKE-----KCLSDDRESL 262
Query: 111 HAVGPEGGVAQPIPSELVTKLLGNRVAVSPIVS-IEPRRRKFHKPITLTIPLPQAANKGM 169
HA+ E Q +L +L + VS I + +E ++ I +T P+ + A K M
Sbjct: 263 HALQDESKFFQEEYKKLKLQLNNVKNTVSDITTQMEMLEKEL---IAITFPIYEEAGKNM 319
Query: 170 INQY 173
N+Y
Sbjct: 320 ANEY 323
>sp|Q9NRM2|ZN277_HUMAN Zinc finger protein 277 OS=Homo sapiens GN=ZNF277 PE=2 SV=2
Length = 450
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 15/88 (17%)
Query: 38 ERELIILRSDDGSTWKEHKLDA----SEEAVQEVLNESFPGEELR-QLEDLHTSRIVRI- 91
+REL+ + DD S W+EH A E+ + + E+L +ED H +++I
Sbjct: 281 DRELLDHQEDDWSDWEEHPASAVCLFCEKQAETI-------EKLYVHMEDAHEFDLLKIK 333
Query: 92 --LTVDFPQYFAVVSRLRQEIHAVGPEG 117
L ++F Q +V+ +R+++H G
Sbjct: 334 SELGLNFYQQVKLVNFIRRQVHQCRCYG 361
>sp|Q5ZIF1|APMAP_CHICK Adipocyte plasma membrane-associated protein OS=Gallus gallus
GN=APMAP PE=2 SV=1
Length = 415
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 126 ELVTKLLGNRVAVSPIVSIEPRRRKFHKPITLTIPLPQAANK 167
E VTKLL R V + RR FH P LT+P A++
Sbjct: 351 ETVTKLLPKRSLVVELSETGSYRRSFHDPTGLTVPYVSEAHE 392
>sp|Q0AIJ8|EFG_NITEC Elongation factor G OS=Nitrosomonas eutropha (strain C91) GN=fusA
PE=3 SV=1
Length = 696
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 37 KERELIILRSDDGSTWKEHKLDASEEAVQEVLNESFPGEELRQLEDL 83
+ERE+ + D +TW+E ++++ EA +E++N+ +L +ED+
Sbjct: 203 EEREIPASQQADAATWREKMIESAAEASEELMNKYLEAGDL-AVEDI 248
>sp|Q9GLY5|ITIH3_RABIT Inter-alpha-trypsin inhibitor heavy chain H3 OS=Oryctolagus
cuniculus GN=ITIH3 PE=2 SV=1
Length = 903
Score = 30.0 bits (66), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 33 SLRNKERELIILRSDDGSTWKEHKLDASEEAVQE 66
+R ++ IL S D +TWKEH + A+ E +QE
Sbjct: 313 DMREEDHLNFILFSSDVTTWKEHLVQATPENLQE 346
>sp|Q06033|ITIH3_HUMAN Inter-alpha-trypsin inhibitor heavy chain H3 OS=Homo sapiens
GN=ITIH3 PE=1 SV=2
Length = 890
Score = 30.0 bits (66), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 42 IILRSDDGSTWKEHKLDASEEAVQE 66
IL S D STWKEH + A+ E +QE
Sbjct: 322 FILFSGDVSTWKEHLVQATPENLQE 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,567,767
Number of Sequences: 539616
Number of extensions: 2776920
Number of successful extensions: 7733
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 7691
Number of HSP's gapped (non-prelim): 41
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)