RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4885
(187 letters)
>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding,
cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C
Length = 326
Score = 197 bits (502), Expect = 2e-63
Identities = 101/214 (47%), Positives = 131/214 (61%), Gaps = 29/214 (13%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDAS 60
E E LASRI+ LGP GA+FL PVI+E+PHFAS +REL++LRS++GS WKEH+
Sbjct: 59 AEEEGLASRIIALGPTGAQFLSPVIVEIPHFASHGRGDRELVVLRSENGSVWKEHRSRYG 118
Query: 61 EEAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAVGPEGGV- 119
E + ++LN EEL LE+L R+ RI+T DFP YF ++SRL Q+ +GPEGG
Sbjct: 119 ESYLDQILNGMD--EELGSLEELEKKRVCRIITTDFPLYFVIMSRLCQDYDIIGPEGGSL 176
Query: 120 --------------------------AQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHK 153
AQP+P ELVTKLLGN+ SPIV++EPRRRKFH+
Sbjct: 177 KSKLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHR 236
Query: 154 PITLTIPLPQAANKGMINQYSGNAPTLRLLCSIT 187
PI L IPLP + + G+ +LRLLCS+
Sbjct: 237 PIGLRIPLPPSWTDNPRDSGEGDTTSLRLLCSVI 270
Score = 34.8 bits (79), Expect = 0.010
Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 8/69 (11%)
Query: 92 LTVDFPQYFAVVSRLRQEIHAVGPEGGVAQPIPSELVTKLLGNRVAVSPIVSIEPRRRKF 151
L V P + R V P+ P L S I+++ P +F
Sbjct: 27 LRVVIPPR-TCAAPTRITCRLVKPQKLSTPP-------PLAEEEGLASRIIALGPTGAQF 78
Query: 152 HKPITLTIP 160
P+ + IP
Sbjct: 79 LSPVIVEIP 87
>4d8o_A Ankyrin-2; ZU5, UPA, death domain, supramodule, protein binding;
2.20A {Homo sapiens}
Length = 581
Score = 184 bits (468), Expect = 6e-56
Identities = 114/214 (53%), Positives = 147/214 (68%), Gaps = 38/214 (17%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDAS 60
+E E LASR++E+GP+GA+FLGPVI+E+PHFA+LR KEREL++LRS++G +WKEH D +
Sbjct: 76 VEGEGLASRLIEVGPSGAQFLGPVIVEIPHFAALRGKERELVVLRSENGDSWKEHFCDYT 135
Query: 61 EEAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAVGPEGGV- 119
E+ + E+LN E L EDL RI RI+T DFPQYFAVVSR++Q+ + +GPEGGV
Sbjct: 136 EDELNEILNGMD--EVLDSPEDLEKKRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVL 193
Query: 120 --------------------------AQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHK 153
AQP+ SELV K+LGN+ SPIV++EPRRRKFHK
Sbjct: 194 SSTVVPQVQAVFPEGALTKRIRVGLQAQPMHSELVKKILGNKATFSPIVTLEPRRRKFHK 253
Query: 154 PITLTIPLPQAANKGMINQYSGNAPTLRLLCSIT 187
PIT+TIP+P + SG+APTLRLLCSIT
Sbjct: 254 PITMTIPVP---------KASGDAPTLRLLCSIT 278
Score = 40.0 bits (92), Expect = 2e-04
Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 11/115 (9%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDAS 60
+ ++A S I+ L P KF P+ + +P + + L +L S G T D +
Sbjct: 232 LGNKATFSPIVTLEPRRRKFHKPITMTIPVPKASGDAPT-LRLLCSITGGTTPAQWEDIT 290
Query: 61 EEAVQEVLNE--SFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAV 113
+NE SF ++R I + S++ +EI V
Sbjct: 291 GTTPLTFVNECVSFTTN--------VSARFWLIDCRQIQESVTFASQVYREIICV 337
Score = 35.0 bits (79), Expect = 0.013
Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 8/71 (11%)
Query: 92 LTVDFPQYFAVVSRLRQEIHAVGPEGGVAQPIPSELVTKLLGNRVAVSPIVSIEPRRRKF 151
L + P + R V P ++ S ++ + P +F
Sbjct: 44 LRIIIPPR-KCTAPTRVTCRLVKRHRLATMP-------PMVEGEGLASRLIEVGPSGAQF 95
Query: 152 HKPITLTIPLP 162
P+ + IP
Sbjct: 96 LGPVIVEIPHF 106
>3f59_A Ankyrin-1; beta sandwich, ZU5, spectrin binding, alternative P
usage, ANK repeat, cytoskeleton, disease mutation; 2.00A
{Homo sapiens} PDB: 3kbt_C 3kbu_C
Length = 161
Score = 136 bits (343), Expect = 2e-41
Identities = 55/105 (52%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDAS 60
E E LASRI+ LGP GA+FL PVI+E+PHFAS +REL++LRS++GS WKEH+
Sbjct: 59 AEEEGLASRIIALGPTGAQFLSPVIVEIPHFASHGRGDRELVVLRSENGSVWKEHRSRYG 118
Query: 61 EEAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSR 105
E + ++LN EEL LE+L R+ RI+T DFP YF ++SR
Sbjct: 119 ESYLDQILNGMD--EELGSLEELEKKRVCRIITTDFPLYFVIMSR 161
Score = 30.8 bits (69), Expect = 0.15
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Query: 101 AVVSRLRQEIHAVGPEGGVAQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHKPITLTIP 160
+ R V P+ P L S I+++ P +F P+ + IP
Sbjct: 35 TCAAPTRITCRLVKPQKLSTPP-------PLAEEEGLASRIIALGPTGAQFLSPVIVEIP 87
>3g5b_A Netrin receptor UNC5B; ZU5, death domain, UPA, apoptosis,
developmental protein, glycoprotein, immunoglobulin
domain, membrane, phosphoprotein; 2.00A {Rattus
norvegicus}
Length = 405
Score = 71.9 bits (175), Expect = 3e-15
Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 13/102 (12%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEHKLDAS 60
S+ + S + GP G PV++ VPH A + + + W+E
Sbjct: 55 EGSQTVLSPSVTCGPTGLLLCRPVVLTVPHCAEVIAGDWIFQLKTQAHQGHWEE------ 108
Query: 61 EEAVQEVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAV 102
V + E+ QLE ++ IL Y
Sbjct: 109 ---VVTLDEETLNTPCYCQLE----AKSCHILLDQLGTYVFT 143
Score = 36.4 bits (83), Expect = 0.003
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Query: 115 PEGGVAQPIPSELVTKLL----------GNRVAVSPIVSIEPRRRKFHKPITLTIP 160
P G + Q +L ++ G++ +SP V+ P +P+ LT+P
Sbjct: 28 PNGAIPQGKFYDLYLRINKTESTLPLSEGSQTVLSPSVTCGPTGLLLCRPVVLTVP 83
>2kxs_A Tight junction protein ZO-1, linker, peptide of M enriched
ZO-associated protein; beta-barrel, protein binding; NMR
{Homo sapiens}
Length = 146
Score = 49.3 bits (117), Expect = 5e-08
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEH 55
+ E L S ++ GP G KFL PV + +PH + + L +
Sbjct: 72 EKGETLLSPLVMCGPHGLKFLKPVELRLPHCDPKTWQNKCLPGDPNYLVGANCVS 126
Score = 33.9 bits (77), Expect = 0.010
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 12/58 (20%)
Query: 115 PEGGVAQPIPSELVTKLL------------GNRVAVSPIVSIEPRRRKFHKPITLTIP 160
P+G + + + E+ K+ +SP+V P KF KP+ L +P
Sbjct: 43 PQGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLP 100
>2kxr_A Tight junction protein ZO-1; beta-barrel, protein binding; NMR
{Homo sapiens}
Length = 118
Score = 47.7 bits (113), Expect = 1e-07
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 1 MESEALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKEH 55
+ E L S ++ GP G KFL PV + +PH + + L D +
Sbjct: 58 EKGETLLSPLVAAGPHGLKFLKPVELRLPHCDPKTWQNK---CLPGDPNYLVGAN 109
Score = 35.3 bits (81), Expect = 0.003
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 12/58 (20%)
Query: 115 PEGGVAQPIPSELVTKLL------------GNRVAVSPIVSIEPRRRKFHKPITLTIP 160
P+G + + + E+ K+ +SP+V+ P KF KP+ L +P
Sbjct: 29 PQGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVAAGPHGLKFLKPVELRLP 86
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 47.2 bits (111), Expect = 9e-07
Identities = 24/180 (13%), Positives = 57/180 (31%), Gaps = 34/180 (18%)
Query: 2 ESEALASRILELG----PAGAKFLGPVIIEVPHF-ASLRNKERELIILRSDDGSTWKEHK 56
E ++L + L+ P P + + S+R+ + D WK
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSI--IAESIRDG-----LATWD---NWKHVN 351
Query: 57 LDASEEAVQEVLNESFPGEELRQLEDLHTSRIVRIL--TVDFPQYFAVVSRLRQEIHAVG 114
D ++ LN P E + + L + + P ++S + ++
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRL------SVFPPSAHIPT--ILLSLIWFDV---- 399
Query: 115 PEGGVAQPIPSELVTKLLGNRVAVSPIVSIEPRRRKFHKPITLTIPLPQAANKGMINQYS 174
+ ++L L + +SI + + A ++ +++ Y+
Sbjct: 400 -IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK----LENEYALHRSIVDHYN 454
Score = 35.6 bits (81), Expect = 0.009
Identities = 16/120 (13%), Positives = 34/120 (28%), Gaps = 29/120 (24%)
Query: 30 HFASLRNKERELIILRSDDGSTWKEHKLDASEEAVQEVLNESFPGEELRQLEDLHTSRIV 89
+ E L++L + +A + +F +L +I+
Sbjct: 236 RLLKSKPYENCLLVL--LN--VQ-----NA------KAW-NAF---------NLS-CKIL 269
Query: 90 RILTVDFPQYFAVVSRLRQEIHAVGPEGGVAQPIPSELVTKLLGNRVAVSP--IVSIEPR 147
+ T + + I + L+ K L R P +++ PR
Sbjct: 270 -LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.0 bits (98), Expect = 5e-05
Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 27/139 (19%)
Query: 17 GAKFLGPVIIEVPHFASLRNKERELIILR-SDDGSTWKEHKLDASEEAVQEVLNESFPGE 75
+FL P + P + L +LI + ++ + V + +F G
Sbjct: 417 SNRFL-P--VASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIP------VYD-TFDGS 466
Query: 76 ELRQLEDLHTSRIVRILT---VDFPQYFAVVSRLRQEIHAV--GPEGGVAQPIPSELVTK 130
+LR L + RIV + V + + H + GP GG + L +
Sbjct: 467 DLRVLSGSISERIVDCIIRLPVKWET--TTQFKAT---HILDFGP-GGASG--LGVLTHR 518
Query: 131 LL---GNRVAVSPIVSIEP 146
G RV V+ + I P
Sbjct: 519 NKDGTGVRVIVAGTLDINP 537
Score = 34.3 bits (78), Expect = 0.019
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 82 DLHTSRIVRI----LTVDFP----QYFAVVSRLRQEIHAVGPE--GGVAQ---PI-PSEL 127
D +++R + + L +F S+L+++ + + PE G A P P+EL
Sbjct: 2 DAYSTRPLTLSHGSLEHVLLVPTASFFIA-SQLQEQFNKILPEPTEGFAADDEPTTPAEL 60
Query: 128 VTKLLG 133
V K LG
Sbjct: 61 VGKFLG 66
Score = 30.8 bits (69), Expect = 0.29
Identities = 46/267 (17%), Positives = 72/267 (26%), Gaps = 122/267 (45%)
Query: 3 SEALA-----SRILELGPAGAKFLGPVIIEVP----------------HFAS--LRNKER 39
+E A + EL KFLG V V F + L +
Sbjct: 45 TEGFAADDEPTTPAELV---GKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGND- 100
Query: 40 ELI------ILRSDDGSTWKEHKL-----DASEEAVQEVLNES----------------- 71
I +L+ +D + K +L A A + +S
Sbjct: 101 --IHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVA 158
Query: 72 -FPG--------EELRQL--------EDL---HTSRIVRILTVD------FPQYFAVVSR 105
F G EELR L DL + ++ F Q ++
Sbjct: 159 IFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 106 LRQEIHAVGPEGGVAQPIPSE--LVTKLLGNRVAVS-PIVSIEPRRRKFHKPITLTIPLP 162
L P P + L++ + +S P+ I +
Sbjct: 219 LE------NPS-----NTPDKDYLLS------IPISCPL-------------IGVI---- 244
Query: 163 QAANKGMINQYSGNAPT-LR-LLCSIT 187
Q A+ + + G P LR L T
Sbjct: 245 QLAHYVVTAKLLGFTPGELRSYLKGAT 271
Score = 30.0 bits (67), Expect = 0.48
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 8/32 (25%)
Query: 7 ASRILELGPAGAKFLGPVIIEVPHFASLRNKE 38
A+ IL+ GP GA LG + RNK+
Sbjct: 498 ATHILDFGPGGASGLGVLTH--------RNKD 521
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 28.6 bits (63), Expect = 0.85
Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 10/42 (23%)
Query: 52 WKE------HKLDASEEAVQEVLNESFPGEELRQLEDLHTSR 87
W+E +LDA+ + +++ E + + LE+ + +
Sbjct: 90 WREEQRKRLQELDAASKVMEQEWRE----KAKKDLEEWNQRQ 127
>2xbg_A YCF48-like protein; photosynthesis, photosystem II,
beta-propeller, assembly FAC; 1.50A
{Thermosynechococcus elongatus}
Length = 327
Score = 28.8 bits (64), Expect = 0.96
Identities = 3/20 (15%), Positives = 9/20 (45%)
Query: 42 IILRSDDGSTWKEHKLDASE 61
+ + D + W+ +L +
Sbjct: 17 SAIPALDYNPWEAIQLPTTA 36
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET:
AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Length = 355
Score = 27.9 bits (61), Expect = 1.9
Identities = 3/22 (13%), Positives = 9/22 (40%)
Query: 39 RELIILRSDDGSTWKEHKLDAS 60
+ ++ ++D W D +
Sbjct: 176 QTMVHQVTNDLKNWGPVVEDVT 197
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A
{Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Length = 367
Score = 27.9 bits (61), Expect = 2.0
Identities = 4/22 (18%), Positives = 9/22 (40%)
Query: 39 RELIILRSDDGSTWKEHKLDAS 60
++L+ + D W + D
Sbjct: 181 QKLVHQTTTDLKKWSKVVDDTK 202
>3ey5_A Acetyltransferase-like, GNAT family; structural genomics,
APC60148, GNAT famil protein structure initiative;
2.15A {Bacteroides thetaiotaomicron}
Length = 181
Score = 27.2 bits (60), Expect = 2.5
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 62 EAVQEVLNESFPGEELRQLEDLH 84
+ ++E+L ESFP EE R+LE L
Sbjct: 19 KFMEELLVESFPPEEYRELEHLR 41
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto
dimethyladenosine transferase, structural genomics,
structural genomics consortium; 1.89A {Plasmodium
falciparum}
Length = 299
Score = 27.3 bits (61), Expect = 3.4
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 21/79 (26%)
Query: 66 EVLNESFPGEELRQLEDLHTSRIVRILTVDFPQYFAVVSRLRQEIHAVGPEGGVAQP--I 123
+ + E LE + FP++ + + P I
Sbjct: 78 SEVKKRCLYEGYNNLEVYEGD----AIKTVFPKFDVCTANI---------------PYKI 118
Query: 124 PSELVTKLLGNRVAVSPIV 142
S L+ KL+ +R V
Sbjct: 119 SSPLIFKLISHRPLFKCAV 137
>3h6j_A Neuraminidase, sialidase; six-bladed beta-propeller, cell WALL,
glycosidase, hydrolase, peptidoglycan-anchor, secreted;
1.60A {Pseudomonas aeruginosa} PDB: 2w38_A
Length = 438
Score = 27.4 bits (60), Expect = 3.5
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 22 GPVIIEVPHFASLRNKERELIILRSDDGSTWKEH 55
G + +P +A+ + SD G TW E
Sbjct: 138 GARYV-IPLYAATGVNYELKWLESSDGGETWGEG 170
>1rr7_A Middle operon regulator; MOR, transcription; 2.20A {Enterobacteria
phage MU} SCOP: a.4.1.14
Length = 129
Score = 25.7 bits (56), Expect = 6.3
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 9 RILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGSTWKE--HKLDASEEAVQE 66
LE+ A K LG + +P +L + R+L I +G E + + V +
Sbjct: 52 HSLEIVVAICKHLGGGQVYIPRGQALDSLIRDLRIWNDFNGRNVSELTTRYGVTFNTVYK 111
Query: 67 VLNESFPGEELRQLEDL 83
+ + + L
Sbjct: 112 AIRRMRRLKYRQYQPSL 128
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance
repressor, structura genomics, joint center for
structural genomics, JCSG; 2.20A {Streptococcus suis}
Length = 142
Score = 25.4 bits (56), Expect = 7.8
Identities = 8/46 (17%), Positives = 19/46 (41%)
Query: 38 ERELIILRSDDGSTWKEHKLDASEEAVQEVLNESFPGEELRQLEDL 83
+RE+++ ++ A +A++ +N+ EE Q
Sbjct: 84 QREVLVWPTEQAREALITNPSAHHQAIKTSMNQILTVEESEQFLAT 129
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding,
cytoplasm, ligase, nucleotide-binding, protein
biosynthesis, ligase/RNA complex; HET: ANP; 2.00A
{Pyrococcus horikoshii} PDB: 2zuf_A
Length = 629
Score = 26.2 bits (58), Expect = 7.9
Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 17/119 (14%)
Query: 4 EALASRILELGPAGAKFLGPVIIEVPHFASLRNKERELIILRSDDGST----------WK 53
E L+ P+ K+ G ++++ K L++ RSD +T WK
Sbjct: 284 ELLSKNENFYIPSDGKYRGAFVMDLRKLF-PDMKNPILVLRRSDGTATYTGKDIAYHLWK 342
Query: 54 EHKLDASEEAVQEVLNESFPGEELRQLEDLHTSRIVRILTVD------FPQYFAVVSRL 106
K+D + + + + + + + I + + L
Sbjct: 343 FGKIDVDLLYKEWDSTTWTTAPDGKSMPNKFGNANIVINVIGAEQKHPQLAIKYALQLL 401
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.136 0.385
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,862,363
Number of extensions: 169969
Number of successful extensions: 443
Number of sequences better than 10.0: 1
Number of HSP's gapped: 434
Number of HSP's successfully gapped: 39
Length of query: 187
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 99
Effective length of database: 4,244,745
Effective search space: 420229755
Effective search space used: 420229755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (24.7 bits)