BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy489
(99 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O89116|VTI1A_MOUSE Vesicle transport through interaction with t-SNAREs homolog 1A
OS=Mus musculus GN=Vti1a PE=1 SV=1
Length = 217
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 34 NSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRT 93
++ N +E Q LLD +E +ER+ + LE GY+IA+ETE+I ++L++L RE +QR R
Sbjct: 106 DAGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARD 165
Query: 94 RL 95
RL
Sbjct: 166 RL 167
>sp|Q96AJ9|VTI1A_HUMAN Vesicle transport through interaction with t-SNAREs homolog 1A
OS=Homo sapiens GN=VTI1A PE=1 SV=2
Length = 217
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 34 NSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRT 93
+ N +E Q LLD +E +ER+ + LE GY+IA+ETE+I ++L++L RE +QR R
Sbjct: 106 DDGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARE 165
Query: 94 RL 95
RL
Sbjct: 166 RL 167
>sp|Q9JI51|VTI1A_RAT Vesicle transport through interaction with t-SNAREs homolog 1A
OS=Rattus norvegicus GN=Vti1a PE=1 SV=1
Length = 224
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 32 SENSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRT 91
SEN E+ LLD +E +ER+ + LE GY+IA+ETE+I ++L++L RE +QR
Sbjct: 111 SENQLIKLREERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDRERIQRA 170
Query: 92 RTRL 95
R RL
Sbjct: 171 RERL 174
>sp|Q04338|VTI1_YEAST t-SNARE VTI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=VTI1 PE=1 SV=3
Length = 217
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 34 NSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRT 93
N++NI+++Q Q+LL ++++G L+ RIA ETE I + ++ DL SQRETL+ R
Sbjct: 108 NASNIDDDQRQQLLSNHAILQKSGDRLKDASRIANETEGIGSQIMMDLRSQRETLENARQ 167
Query: 94 RL 95
L
Sbjct: 168 TL 169
>sp|O88384|VTI1B_MOUSE Vesicle transport through interaction with t-SNAREs homolog 1B
OS=Mus musculus GN=Vti1b PE=1 SV=1
Length = 232
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 37 NINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTR 94
++N QSQR LL +E + R + +E +RIA ET++I T+++++L QR+ L+RT++R
Sbjct: 121 HLNRLQSQRALLLQGTESLNRATQSIERSHRIATETDQIGTEIIEELGEQRDQLERTKSR 180
Query: 95 L 95
L
Sbjct: 181 L 181
>sp|Q9UEU0|VTI1B_HUMAN Vesicle transport through interaction with t-SNAREs homolog 1B
OS=Homo sapiens GN=VTI1B PE=1 SV=3
Length = 232
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 30 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 87
Y EN ++N QSQR LL +E + R + +E +RIA ET++I ++++++L QR+
Sbjct: 115 YAVENE-HMNRLQSQRAMLLQGTESLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQ 173
Query: 88 LQRTRTRL 95
L+RT++RL
Sbjct: 174 LERTKSRL 181
>sp|P58200|VTI1B_RAT Vesicle transport through interaction with t-SNAREs homolog 1B
OS=Rattus norvegicus GN=Vti1b PE=1 SV=2
Length = 232
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 37 NINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTR 94
++N QSQR LL +E + R + +E +RIA ET++I ++++++L QR+ L+RT++R
Sbjct: 121 HLNRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSR 180
Query: 95 L 95
L
Sbjct: 181 L 181
>sp|Q2KIU0|VTI1B_BOVIN Vesicle transport through interaction with t-SNAREs homolog 1B
OS=Bos taurus GN=VTI1B PE=2 SV=1
Length = 232
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 30 YFSENSTNINEEQSQR--LLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 87
Y EN ++N QSQR LL ++ + R + +E +RIA ET++I ++++++L QR+
Sbjct: 115 YAVENE-HMNRLQSQRALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQ 173
Query: 88 LQRTRTRL 95
L+RT++RL
Sbjct: 174 LERTKSRL 181
>sp|Q9SEL6|VTI11_ARATH Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana GN=VTI11 PE=1
SV=2
Length = 221
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 28 VEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRET 87
+E ++ + +Q RL+ ++E + RT ++ R +ETE+I +L+DL QR++
Sbjct: 105 LEAGMADTKTASADQRARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQS 164
Query: 88 LQRTRTRLH 96
L R LH
Sbjct: 165 LLRAHETLH 173
>sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana GN=VTI13 PE=2
SV=1
Length = 221
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 39 NEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTRLH 96
+ +Q RL+ +++ + RT ++ R +ETE++ +L+DL QR++L R LH
Sbjct: 116 SADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLH 173
>sp|Q9SEL5|VTI12_ARATH Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana GN=VTI12 PE=1
SV=3
Length = 222
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 38 INEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTRLH 96
++ +Q RL + E ++++ + R+ +ETE++ +++DL QR+TL +LH
Sbjct: 116 VSADQRGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLH 174
>sp|P78768|VTI1_SCHPO Vesicle transport v-SNARE protein vti1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=vti1 PE=2 SV=2
Length = 214
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 41 EQSQRLLDTSEEIERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQ 89
+Q RLL + +E++ + L RIA ETE I +L+DL QR L+
Sbjct: 112 DQRTRLLQGTNRLEQSSQRLLESQRIANETEGIGASILRDLHGQRNQLE 160
>sp|P89432|OBP_HHV2H Replication origin-binding protein OS=Human herpesvirus 2 (strain
HG52) GN=UL9 PE=3 SV=2
Length = 867
Score = 32.7 bits (73), Expect = 0.77, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 21 ESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIAT 75
ESG+ V YFS + +N+ RL+ E + R G +L Y + + E ++T
Sbjct: 143 ESGLPDFVTYFSSTNYIMNDRPFHRLIVQVESLHRVGPNLLNNYDVLVLDEVMST 197
>sp|P10193|OBP_HHV11 Replication origin-binding protein OS=Human herpesvirus 1 (strain
17) GN=UL9 PE=1 SV=1
Length = 851
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 21 ESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRIAIETEKIAT 75
ESG+ V YFS + +N+ RL+ E + R G +L Y + + E ++T
Sbjct: 125 ESGLVDFVTYFSSTNYIMNDRPFHRLIVQVESLHRVGPNLLNNYDVLVLDEVMST 179
>sp|Q49YE0|Y1056_STAS1 Putative universal stress protein SSP1056 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1056 PE=3 SV=1
Length = 167
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 2 LEKRPKKDQNKINVVTCKTESGVEYHVEYFSENSTNINEE--QSQRLLDTSEEIERTGKH 59
+ KR +NV+ +T S E + F+E S N +++ + + + T+ ++
Sbjct: 27 VAKRNDAKLTVVNVIDSRTYSSYEVYDAQFTEKSKNFSDDLLKGYKEVATNAGVKNVETR 86
Query: 60 LETGYRIAIETEKIATDVLKDL 81
LE G AI +K+ATDV DL
Sbjct: 87 LEFGSPKAIIPKKLATDVDADL 108
>sp|Q8FZ13|GLMM_BRUSU Phosphoglucosamine mutase OS=Brucella suis biovar 1 (strain 1330)
GN=glmM PE=3 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 14 NVVTCKTESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRI---AIET 70
N+ +T+ G Y VE+ E+ N+ EQS ++ + + TG L + +I A E
Sbjct: 301 NLTLARTKVGDRYVVEHMREHGFNVGGEQSGHIVLS--DFATTGDGLISALQILAVAQEQ 358
Query: 71 EKIATDVLKDLESQRETLQRTRT 93
K +DV + + + L+ RT
Sbjct: 359 NKPISDVCRKFQPVPQLLKNVRT 381
>sp|A9WWG7|GLMM_BRUSI Phosphoglucosamine mutase OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=glmM PE=3 SV=2
Length = 451
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 14 NVVTCKTESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRI---AIET 70
N+ +T+ G Y VE+ E+ N+ EQS ++ + + TG L + +I A E
Sbjct: 301 NLTLARTKVGDRYVVEHMREHGFNVGGEQSGHIVLS--DFATTGDGLISALQILAVAQEQ 358
Query: 71 EKIATDVLKDLESQRETLQRTRT 93
K +DV + + + L+ RT
Sbjct: 359 NKPISDVCRKFQPVPQLLKNVRT 381
>sp|A5VS47|GLMM_BRUO2 Phosphoglucosamine mutase OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=glmM PE=3 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 14 NVVTCKTESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRI---AIET 70
N+ +T+ G Y VE+ E+ N+ EQS ++ + + TG L + +I A E
Sbjct: 301 NLTLARTKVGDRYVVEHMREHGFNVGGEQSGHIVLS--DFATTGDGLISALQILAVAQEQ 358
Query: 71 EKIATDVLKDLESQRETLQRTRT 93
K +DV + + + L+ RT
Sbjct: 359 NKPISDVCRKFQPVPQLLKNVRT 381
>sp|Q8YIU8|GLMM_BRUME Phosphoglucosamine mutase OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=glmM PE=3 SV=2
Length = 451
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 14 NVVTCKTESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRI---AIET 70
N+ +T+ G Y VE+ E+ N+ EQS ++ + + TG L + +I A E
Sbjct: 301 NLTLARTKVGDRYVVEHMREHGFNVGGEQSGHIVLS--DFATTGDGLISALQILAVAQEQ 358
Query: 71 EKIATDVLKDLESQRETLQRTRT 93
K +DV + + + L+ RT
Sbjct: 359 NKPISDVCRKFQPVPQLLKNVRT 381
>sp|A9M7I9|GLMM_BRUC2 Phosphoglucosamine mutase OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=glmM PE=3 SV=2
Length = 451
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 14 NVVTCKTESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRI---AIET 70
N+ +T+ G Y VE+ E+ N+ EQS ++ + + TG L + +I A E
Sbjct: 301 NLTLARTKVGDRYVVEHMREHGFNVGGEQSGHIVLS--DFATTGDGLISALQILAVAQEQ 358
Query: 71 EKIATDVLKDLESQRETLQRTRT 93
K +DV + + + L+ RT
Sbjct: 359 NKPISDVCRKFQPVPQLLKNVRT 381
>sp|Q57BJ0|GLMM_BRUAB Phosphoglucosamine mutase OS=Brucella abortus biovar 1 (strain
9-941) GN=glmM PE=3 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 14 NVVTCKTESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRI---AIET 70
N+ +T+ G Y VE+ E+ N+ EQS ++ + + TG L + +I A E
Sbjct: 301 NLTLARTKVGDRYVVEHMREHGFNVGGEQSGHIVLS--DFATTGDGLISALQILAVAQEQ 358
Query: 71 EKIATDVLKDLESQRETLQRTRT 93
K +DV + + + L+ RT
Sbjct: 359 NKPISDVCRKFQPVPQLLKNVRT 381
>sp|Q2YQH8|GLMM_BRUA2 Phosphoglucosamine mutase OS=Brucella abortus (strain 2308) GN=glmM
PE=3 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 14 NVVTCKTESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETGYRI---AIET 70
N+ +T+ G Y VE+ E+ N+ EQS ++ + + TG L + +I A E
Sbjct: 301 NLTLARTKVGDRYVVEHMREHGFNVGGEQSGHIVLS--DFATTGDGLISALQILAVAQEQ 358
Query: 71 EKIATDVLKDLESQRETLQRTRT 93
K +DV + + + L+ RT
Sbjct: 359 NKPISDVCRKFQPVPQLLKNVRT 381
>sp|Q8CS61|Y1385_STAES Putative universal stress protein SE_1385 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_1385 PE=3 SV=1
Length = 166
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 13 INVVTCKTESGVEYHVEYFSENSTNINEE--QSQRLLDTSEEIERTGKHLETGYRIAIET 70
+NV+ +T S E + F+E S + +EE + + + T+ ++ LE G AI
Sbjct: 38 VNVIDSRTYSSYEVYDAQFTEKSKHFSEELLKGYKEVATNAGVKNVDTRLEFGSPKAIIP 97
Query: 71 EKIATDVLKDL 81
+K+A DV DL
Sbjct: 98 KKLARDVGADL 108
>sp|Q5HNJ5|Y1273_STAEQ Putative universal stress protein SERP1273 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP1273 PE=3
SV=1
Length = 166
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 13 INVVTCKTESGVEYHVEYFSENSTNINEE--QSQRLLDTSEEIERTGKHLETGYRIAIET 70
+NV+ +T S E + F+E S + +EE + + + T+ ++ LE G AI
Sbjct: 38 VNVIDSRTYSSYEVYDAQFTEKSKHFSEELLKGYKEVATNAGVKNVDTRLEFGSPKAIIP 97
Query: 71 EKIATDVLKDL 81
+K+A DV DL
Sbjct: 98 KKLARDVGADL 108
>sp|Q8K5B1|IL31R_MOUSE Interleukin-31 receptor subunit alpha OS=Mus musculus GN=Il31ra
PE=1 SV=3
Length = 716
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 26 YHVEYFSENSTNINE 40
YH++YF+ENSTN+ E
Sbjct: 252 YHIQYFAENSTNLTE 266
>sp|P47127|AIM24_YEAST Altered inheritance of mitochondria protein 24, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=AIM24 PE=1 SV=1
Length = 394
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 6 PKKDQ---NKINVVTCKTESGVEYHVEYFSE------NSTNINEEQSQRLLDTSEEIERT 56
P+K Q + NV+ C G+ Y +E E NS NI Q LD + +ER
Sbjct: 190 PRKFQILNGRGNVLVCG--GGLVYSIELIDESDKILVNSRNILAINGQSQLDIANSVERQ 247
Query: 57 GKHLETGYRIAIETEKIATDVLKD 80
H+E Y + +A +K+
Sbjct: 248 ELHVEGAYVGDSSNDTVAPKFIKN 271
>sp|C8ZBM7|AIM24_YEAS8 Altered inheritance of mitochondria protein 24, mitochondrial
OS=Saccharomyces cerevisiae (strain Lalvin EC1118 /
Prise de mousse) GN=AIM24 PE=3 SV=1
Length = 394
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 6 PKKDQ---NKINVVTCKTESGVEYHVEYFSE------NSTNINEEQSQRLLDTSEEIERT 56
P+K Q + NV+ C G+ Y +E E NS NI Q LD + +ER
Sbjct: 190 PRKFQILNGRGNVLVCG--GGLVYSIELIDESDKILVNSRNILAINGQSQLDIANSVERQ 247
Query: 57 GKHLETGYRIAIETEKIATDVLKD 80
H+E Y + +A +K+
Sbjct: 248 ELHVEGAYVGDSSNDTVAPKFIKN 271
>sp|B3LQG6|AIM24_YEAS1 Altered inheritance of mitochondria protein 24, mitochondrial
OS=Saccharomyces cerevisiae (strain RM11-1a) GN=AIM24
PE=3 SV=1
Length = 394
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 6 PKKDQ---NKINVVTCKTESGVEYHVEYFSE------NSTNINEEQSQRLLDTSEEIERT 56
P+K Q + NV+ C G+ Y +E E NS NI Q LD + +ER
Sbjct: 190 PRKFQILNGRGNVLVCG--GGLVYSIELIDESDKILVNSRNILAINGQSQLDIANSVERQ 247
Query: 57 GKHLETGYRIAIETEKIATDVLKD 80
H+E Y + +A +K+
Sbjct: 248 ELHVEGAYVGDSSNDTVAPKFIKN 271
>sp|A6ZQ37|AIM24_YEAS7 Altered inheritance of mitochondria protein 24, mitochondrial
OS=Saccharomyces cerevisiae (strain YJM789) GN=AIM24
PE=3 SV=1
Length = 394
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 6 PKKDQ---NKINVVTCKTESGVEYHVEYFSE------NSTNINEEQSQRLLDTSEEIERT 56
P+K Q + NV+ C G+ Y +E E NS NI Q LD + +ER
Sbjct: 190 PRKFQILNGRGNVLVCG--GGLVYSIELIDECDKILVNSRNILAINGQSQLDIANSVERQ 247
Query: 57 GKHLETGYRIAIETEKIATDVLKD 80
H+E Y + +A +K+
Sbjct: 248 ELHVEGAYVGDSSNDTVAPKFIKN 271
>sp|C7GMC5|AIM24_YEAS2 Altered inheritance of mitochondria protein 24, mitochondrial
OS=Saccharomyces cerevisiae (strain JAY291) GN=AIM24
PE=3 SV=1
Length = 394
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 6 PKKDQ---NKINVVTCKTESGVEYHVEYFSE------NSTNINEEQSQRLLDTSEEIERT 56
P+K Q + NV+ C G+ Y +E E NS NI Q LD + +ER
Sbjct: 190 PRKFQILNGRGNVLVCG--GGLVYSIELIDECDKILVNSRNILAINGQSQLDIANSVERQ 247
Query: 57 GKHLETGYRIAIETEKIATDVLKD 80
H+E Y + +A +K+
Sbjct: 248 ELHVEGAYVGDSSNDTVAPKFIKN 271
>sp|Q3UVU3|ZNT10_MOUSE Zinc transporter 10 OS=Mus musculus GN=Slc30a10 PE=1 SV=1
Length = 470
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 54 ERTGKHLETGYRIAIETEKIATDVLKDLESQRETLQRTRTRLHYQ 98
E G+ YR +IE ++A DV Q +TL +T+ R HY+
Sbjct: 422 EHNGRSSRESYR-SIEAPEVAIDVDGCPREQGQTLSKTQERQHYE 465
>sp|Q5T2S8|ARMC4_HUMAN Armadillo repeat-containing protein 4 OS=Homo sapiens GN=ARMC4 PE=2
SV=1
Length = 1044
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 45 RLLDTSEE---IERTGKHLETG----YRIAIETEKIATDVLKDLESQRETLQRTRTRLHY 97
RLL TS E I G E YR AI+ E+I +++K+L S+ E LQ Y
Sbjct: 639 RLLKTSHENMLIPVVGTLQECASEENYRAAIKAERIIENLVKNLNSENEQLQEHCAMAIY 698
Query: 98 Q 98
Q
Sbjct: 699 Q 699
>sp|Q9WXZ5|GLMS_THEMA Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM
3109 / JCM 10099) GN=glmS PE=3 SV=3
Length = 606
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 8 KDQNKINVVTCKTESGVEYHVEYFSENSTNINEEQSQRLLDTSEEIERTGKHLETG-YRI 66
K+ ++I VV+C T +YF EN T+I+ E ++ S E H++ G I
Sbjct: 289 KNADRIRVVSCGTSYYAGLVFKYFLENHTDIDVE-----IEVSSEFRYKRPHIKEGDVLI 343
Query: 67 AIETEKIATDVLKDL 81
AI D L+ +
Sbjct: 344 AISQSGETADTLESV 358
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.336
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,268,177
Number of Sequences: 539616
Number of extensions: 1177221
Number of successful extensions: 4489
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 4458
Number of HSP's gapped (non-prelim): 78
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)