Query psy4890
Match_columns 364
No_of_seqs 314 out of 1849
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 20:25:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4890.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4890hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b7y_A E3 ubiquitin-protein li 99.8 2.1E-19 7.3E-24 154.9 15.0 129 213-344 13-152 (153)
2 3pyc_A E3 ubiquitin-protein li 99.8 5.7E-19 2E-23 148.8 14.3 123 219-343 4-131 (132)
3 3kwu_A MUNC13-1; calcium bindi 99.8 1.7E-18 5.7E-23 148.5 16.2 120 219-344 16-146 (148)
4 1gmi_A Protein kinase C, epsil 99.8 5.6E-19 1.9E-23 150.0 12.4 120 218-346 4-134 (136)
5 2dmh_A Myoferlin; beta-sandwic 99.8 1E-18 3.6E-23 148.2 13.3 125 218-345 5-133 (140)
6 2ep6_A MCTP2 protein; beta san 99.8 2.1E-18 7E-23 145.5 13.5 122 217-344 10-131 (133)
7 1wfj_A Putative elicitor-respo 99.8 1.4E-18 4.9E-23 146.7 11.6 121 218-346 8-131 (136)
8 3m7f_B E3 ubiquitin-protein li 99.8 2.8E-18 9.7E-23 151.9 13.8 125 218-345 6-141 (176)
9 2fk9_A Protein kinase C, ETA t 99.8 3.1E-18 1E-22 151.1 13.1 120 217-344 26-156 (157)
10 1rlw_A Phospholipase A2, CALB 99.7 7.6E-18 2.6E-22 140.2 10.2 93 220-313 3-99 (126)
11 2nq3_A Itchy homolog E3 ubiqui 99.7 2.9E-17 1E-21 146.3 11.6 119 219-343 35-159 (173)
12 2z0u_A WW domain-containing pr 99.7 1.2E-17 4.1E-22 146.2 4.8 94 219-312 42-141 (155)
13 2cjt_A UNC-13 homolog A, MUNC1 99.7 1.8E-16 6.1E-21 134.9 11.8 117 220-344 5-131 (131)
14 2b3r_A Phosphatidylinositol-4- 99.7 1.9E-16 6.6E-21 134.4 11.1 95 218-313 18-118 (134)
15 1a25_A CALB, protein kinase C 99.7 1.4E-16 4.8E-21 136.9 9.6 94 220-313 31-128 (149)
16 2bwq_A Regulating synaptic mem 99.7 1.1E-16 3.6E-21 133.7 8.0 96 219-314 17-120 (129)
17 2r83_A Synaptotagmin-1; C2A-C2 99.7 3.2E-16 1.1E-20 147.6 11.9 125 219-344 18-146 (284)
18 3rdl_A Protein kinase C alpha 99.7 2.1E-16 7.1E-21 133.1 9.4 103 220-322 16-122 (137)
19 3fdw_A Synaptotagmin-like prot 99.7 7.6E-17 2.6E-21 138.5 6.7 105 219-323 22-133 (148)
20 1rsy_A Synaptotagmin I; calciu 99.7 1.8E-16 6.3E-21 136.8 8.9 95 219-313 41-138 (152)
21 2d8k_A Synaptotagmin VII; exoc 99.7 2.4E-16 8.1E-21 134.1 9.2 96 219-314 25-124 (141)
22 3f04_A Synaptotagmin-1; C2A, c 99.7 1.7E-16 5.7E-21 135.2 8.3 95 219-313 33-130 (143)
23 1rh8_A Piccolo protein; beta-s 99.7 8.5E-17 2.9E-21 136.6 6.3 93 221-313 19-126 (142)
24 1v27_A Regulating synaptic mem 99.7 1.1E-16 3.8E-21 135.3 6.9 103 220-322 21-131 (141)
25 2cm5_A Rabphilin-3A; protein t 99.6 9E-16 3.1E-20 134.3 12.1 92 220-311 37-133 (166)
26 2dmg_A KIAA1228 protein; beta- 99.6 4.8E-16 1.6E-20 132.2 9.6 102 220-322 24-133 (142)
27 3jzy_A Intersectin 2; C2 domai 99.6 1E-15 3.6E-20 155.3 13.8 123 218-344 385-507 (510)
28 1ugk_A Synaptotagmin IV, KIAA1 99.6 3.9E-16 1.3E-20 132.3 8.7 96 219-314 21-121 (138)
29 1tjx_A Similar to synaptotagmi 99.6 9.3E-16 3.2E-20 133.2 10.8 91 220-310 25-120 (159)
30 1wfm_A Synaptotagmin XIII; C2 99.6 1.4E-15 4.7E-20 129.6 11.5 91 220-313 26-120 (138)
31 2q3x_A Regulating synaptic mem 99.6 4.8E-16 1.6E-20 137.4 8.7 102 220-322 30-137 (171)
32 3n5a_A Synaptotagmin-7; calciu 99.6 5.1E-16 1.8E-20 130.6 8.4 93 218-310 14-111 (138)
33 2chd_A Rabphilin-3A, exophilin 99.6 3.8E-16 1.3E-20 132.8 7.6 95 219-313 28-128 (142)
34 1w15_A Synaptotagmin IV; metal 99.6 8.6E-16 2.9E-20 132.4 9.9 92 219-310 29-125 (153)
35 2cjs_A UNC-13 homolog A, MUNC1 99.6 1.7E-15 5.9E-20 134.4 11.9 120 220-347 14-143 (167)
36 3fbk_A RGS3, RGP3, regulator o 99.6 5.4E-16 1.9E-20 134.1 7.5 96 216-312 23-123 (153)
37 1dqv_A Synaptotagmin III; beta 99.6 6.8E-15 2.3E-19 140.3 13.3 124 218-345 18-149 (296)
38 3nsj_A Perforin-1; pore formin 99.6 9.3E-15 3.2E-19 151.5 14.1 109 219-343 393-502 (540)
39 2enp_A B/K protein; C2 type 1, 99.6 1.2E-15 4E-20 130.7 6.1 95 220-314 26-130 (147)
40 1djx_A PLC-D1, phosphoinositid 99.5 3E-14 1E-18 150.0 13.6 186 134-344 414-623 (624)
41 2r83_A Synaptotagmin-1; C2A-C2 99.5 6.3E-14 2.1E-18 131.8 11.1 93 218-310 148-245 (284)
42 1dqv_A Synaptotagmin III; beta 99.4 8.8E-14 3E-18 132.6 3.4 93 219-311 151-248 (296)
43 1cjy_A CPLA2, protein (cytosol 99.4 3.1E-13 1.1E-17 144.6 7.7 105 217-322 15-124 (749)
44 3l9b_A Otoferlin; C2-domain, b 99.4 3.1E-12 1E-16 111.0 11.3 116 220-346 21-141 (144)
45 3pfq_A PKC-B, PKC-beta, protei 99.2 2.1E-11 7.2E-16 128.9 8.5 95 220-314 172-270 (674)
46 3bxj_A RAS GTPase-activating p 99.2 3E-12 1E-16 130.8 0.6 123 218-347 9-159 (483)
47 3ohm_B 1-phosphatidylinositol- 99.1 8.6E-11 2.9E-15 127.7 10.5 162 151-345 674-845 (885)
48 3qr0_A Phospholipase C-beta (P 99.1 2.7E-10 9.4E-15 123.0 13.9 174 151-359 599-783 (816)
49 2zkm_X 1-phosphatidylinositol- 99.1 4E-10 1.4E-14 121.7 12.1 161 151-344 627-798 (799)
50 1yrk_A NPKC-delta, protein kin 98.4 4.7E-06 1.6E-10 70.5 12.7 111 220-343 6-123 (126)
51 2enj_A NPKC-theta, protein kin 98.2 6.8E-06 2.3E-10 70.5 9.9 113 220-343 10-128 (138)
52 2wxf_A Phosphatidylinositol-4, 90.7 1.3 4.3E-05 48.7 11.2 102 220-324 217-339 (940)
53 1e7u_A Phosphatidylinositol 3- 81.7 5.8 0.0002 43.6 10.3 102 221-324 219-345 (961)
54 3hhm_A Phosphatidylinositol-4, 81.5 5.4 0.00018 44.5 9.9 102 221-324 356-470 (1091)
55 2y3a_A Phosphatidylinositol-4, 80.5 1.9 6.5E-05 48.1 6.0 101 221-324 354-485 (1092)
56 2yrb_A Protein fantom; beta sa 63.5 22 0.00075 30.7 7.4 127 216-346 14-151 (156)
57 3l4c_A Dedicator of cytokinesi 59.9 72 0.0025 28.9 10.6 52 258-309 81-138 (220)
No 1
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.82 E-value=2.1e-19 Score=154.86 Aligned_cols=129 Identities=19% Similarity=0.314 Sum_probs=96.2
Q ss_pred CCCcceeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCE----EeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEE
Q psy4890 213 IDNEKVNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSV----EINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVE 288 (364)
Q Consensus 213 p~~~p~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~----~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~ 288 (364)
|...+....|+|+|++|++|++.|.+|.+||||++.++.. ....+|+++.+++||+||+.|.|.+. +....|.|+
T Consensus 13 ~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~-~~~~~l~~~ 91 (153)
T 3b7y_A 13 LEDEENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH-PQQHRLLFE 91 (153)
T ss_dssp SSCCTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEEC-TTTCEEEEE
T ss_pred ccCCCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEec-CCCCEEEEE
Confidence 4556677889999999999999999999999999998631 23446677899999999999999987 456789999
Q ss_pred EEecCCCCCCceeEEEEeeccccccccCC-------CccccccccccCCCCCceEEEEEEEEe
Q psy4890 289 IKDHDSVSKDDYIGMTEMDLESRFYSRHR-------GSCARWTSDLEVSGSSPGEVLPGITLQ 344 (364)
Q Consensus 289 V~D~D~iskDD~IGet~IdLenr~~s~~~-------a~~gL~p~~y~~~G~~~GEIllSL~fq 344 (364)
|||+|.+++|++||++.|+|.++...... .|+.|.+.. ..+...|+|+++++|.
T Consensus 92 V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~--~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 92 VFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS--HKSRVKGYLRLKMTYL 152 (153)
T ss_dssp EEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS--TTCCCCSEEEEEEEEC
T ss_pred EEECCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc--CCCCcceEEEEEEEEe
Confidence 99999999999999999999987654321 344442211 1235689999999984
No 2
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.80 E-value=5.7e-19 Score=148.78 Aligned_cols=123 Identities=14% Similarity=0.227 Sum_probs=94.2
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEecCCCCC-
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVSK- 297 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~isk- 297 (364)
...|+|+|++|++|+++|.+|.+||||++.++......+|.++.+++||+||+.|.|.+..+. .|.|+|||+|.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEEEECCCCCCC
Confidence 456889999999999999999999999999975333445677899999999999999987543 49999999999876
Q ss_pred --CceeEEEEeeccccccccC--CCccccccccccCCCCCceEEEEEEEE
Q psy4890 298 --DDYIGMTEMDLESRFYSRH--RGSCARWTSDLEVSGSSPGEVLPGITL 343 (364)
Q Consensus 298 --DD~IGet~IdLenr~~s~~--~a~~gL~p~~y~~~G~~~GEIllSL~f 343 (364)
|++||++.|+|+++..... ..+..|...........+|+|.++|+.
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 8999999999987632211 233444221111122469999999986
No 3
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.79 E-value=1.7e-18 Score=148.46 Aligned_cols=120 Identities=21% Similarity=0.383 Sum_probs=98.5
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEecCCC---
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSV--- 295 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~i--- 295 (364)
...|+|+|++|++|++.|.+|.+||||++.++++..+| .++.+++||.||+.|.|.+..+ ...|.|+|||+|..
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT--~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRT--KTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEEC--CCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHH
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEEC--CccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCccc
Confidence 46789999999999999999999999999999876655 5688999999999999999754 47899999999986
Q ss_pred --------CCCceeEEEEeeccccccccCCCccccccccccCCCCCceEEEEEEEEe
Q psy4890 296 --------SKDDYIGMTEMDLESRFYSRHRGSCARWTSDLEVSGSSPGEVLPGITLQ 344 (364)
Q Consensus 296 --------skDD~IGet~IdLenr~~s~~~a~~gL~p~~y~~~G~~~GEIllSL~fq 344 (364)
++|++||++.|+|.+.. .....|..|.+. ...+..+|+|+++|+|+
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~-~~~~~w~~L~~~--~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLS-GEMDVWYNLDKR--TDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCC-SEEEEEEECBCS--STTCCCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHCc-CCCCEEEEcccC--CCCCCCceEEEEEEEEE
Confidence 89999999999999872 233345555322 11234789999999984
No 4
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.79 E-value=5.6e-19 Score=149.96 Aligned_cols=120 Identities=18% Similarity=0.291 Sum_probs=95.5
Q ss_pred eeEEEEEEEEEecCCCCCCCCCC-----------CCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecCCCCeEE
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGK-----------CDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLT 286 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~-----------sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~ 286 (364)
....|+|+|++|++|++.|.+|+ +||||++.+++... .+|.++.+++||+|||.|.|.+..+ ..|.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~-~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~ 80 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRI-GQTATKQKTNSPAWHDEFVTDVCNG--RKIE 80 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEE-EECCCCSSCSSCEEEEEEEEEEEEE--CEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEe-eeeeEECCCcCCccCCEEEEEecCC--CEEE
Confidence 34678999999999999886554 99999999987653 2456788999999999999998654 8899
Q ss_pred EEEEecCCCCCCceeEEEEeeccccccccCCCccccccccccCCCCCceEEEEEEEEeec
Q psy4890 287 VEIKDHDSVSKDDYIGMTEMDLESRFYSRHRGSCARWTSDLEVSGSSPGEVLPGITLQSG 346 (364)
Q Consensus 287 V~V~D~D~iskDD~IGet~IdLenr~~s~~~a~~gL~p~~y~~~G~~~GEIllSL~fq~g 346 (364)
|+|||+|.+++||+||++.|+|.++...... .. ..++.+ ..+|+|+++|+|+++
T Consensus 81 ~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~-~~---~~w~~L--~~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 81 LAVFHDAPIGYDDFVANCTIQFEELLQNGSR-HF---EDWIDL--EPEGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHTSTTCS-EE---EEEEEC--BSSCEEEEEEEEEEE
T ss_pred EEEEeCCCCCCCCEEEEEEEEHHHhcccCCC-Cc---cEEEEc--CCCeEEEEEEEEEec
Confidence 9999999999999999999999887643211 11 223332 248999999999765
No 5
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1e-18 Score=148.17 Aligned_cols=125 Identities=16% Similarity=0.163 Sum_probs=98.2
Q ss_pred eeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecC---CCCeEEEEEEecCC
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFP---TDAKLTVEIKDHDS 294 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p---~~~~L~V~V~D~D~ 294 (364)
....|+|+|++|++|++.|. |.+||||++.+++++.+| .++.+++||+||+.|.|.+..+ ....|.|+|||+|.
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT--~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~ 81 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKT--KKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET 81 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEEC--CCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEe--eeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC
Confidence 34578999999999999998 999999999999876555 5688999999999999998654 46899999999999
Q ss_pred CCCCceeEEEEeecccccccc-CCCccccccccccCCCCCceEEEEEEEEee
Q psy4890 295 VSKDDYIGMTEMDLESRFYSR-HRGSCARWTSDLEVSGSSPGEVLPGITLQS 345 (364)
Q Consensus 295 iskDD~IGet~IdLenr~~s~-~~a~~gL~p~~y~~~G~~~GEIllSL~fq~ 345 (364)
+++|++||++.|+|.++.... ...|..|.+..-......+|+|+++++|..
T Consensus 82 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 82 IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 999999999999999875432 123444212111112245799999999954
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=2.1e-18 Score=145.55 Aligned_cols=122 Identities=20% Similarity=0.274 Sum_probs=99.3
Q ss_pred ceeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEecCCCC
Q psy4890 217 KVNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVS 296 (364)
Q Consensus 217 p~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~is 296 (364)
+....|+|+|++|++|++.|..|.+||||++.+++++.+| .++.+++||+||+.|.|.+.. ....|.|+|||+|.++
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT--~~~~~t~nP~wne~f~f~~~~-~~~~l~i~V~d~d~~~ 86 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQT--HTVYKNLNPEWNKVFTFPIKD-IHDVLEVTVFDEDGDK 86 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEEC--CCCSSCSSCCCCEEEEEEESC-TTCEEEEEEEEEETTE
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEe--eeecCCCCCccccEEEEEecC-CCCEEEEEEEECCCCC
Confidence 3557789999999999999999999999999999876654 568899999999999999874 4578999999999999
Q ss_pred CCceeEEEEeeccccccccCCCccccccccccCCCCCceEEEEEEEEe
Q psy4890 297 KDDYIGMTEMDLESRFYSRHRGSCARWTSDLEVSGSSPGEVLPGITLQ 344 (364)
Q Consensus 297 kDD~IGet~IdLenr~~s~~~a~~gL~p~~y~~~G~~~GEIllSL~fq 344 (364)
+|++||++.|+|.+... ....|..|... ...+..+|+|+++++|-
T Consensus 87 ~~~~lG~~~i~l~~l~~-~~~~w~~L~~~--~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRD-GQPNCYVLKNK--DLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEECCBCEEEGGGCCS-SCCEECCCBCS--CTTSCCSSEEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccC-CCceEEEeecC--CCCCccceEEEEEEEEE
Confidence 99999999999998743 22334444221 11345789999999883
No 7
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.77 E-value=1.4e-18 Score=146.65 Aligned_cols=121 Identities=22% Similarity=0.290 Sum_probs=100.1
Q ss_pred eeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeec-CCCCCccceEEEEEeecCCCCeEEEEEEecCCCC
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVT-NQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVS 296 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~-~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~is 296 (364)
....|+|+|++|++|++.|.+|.+||||++.++++..+| .++. +++||+||+.|.|.+.. ....|.|+|||+|.++
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT--~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKS--NVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGT 84 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEEC--CCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCT
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECCcccee--EeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCC
Confidence 456789999999999999999999999999998876554 5577 89999999999999874 6789999999999999
Q ss_pred CCceeEEEEeecccccccc--CCCccccccccccCCCCCceEEEEEEEEeec
Q psy4890 297 KDDYIGMTEMDLESRFYSR--HRGSCARWTSDLEVSGSSPGEVLPGITLQSG 346 (364)
Q Consensus 297 kDD~IGet~IdLenr~~s~--~~a~~gL~p~~y~~~G~~~GEIllSL~fq~g 346 (364)
+|++||++.|+|.++.... ...|..|. ..+...|+|+++|+|...
T Consensus 85 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-----~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEGSIPPTAYNVV-----KDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp TTCCSEEEEEESHHHHHHSEEEEEEEEEE-----ETTEEEEEEEEEEEEEEC
T ss_pred CCceEEEEEEEHHHhccCCCCCcEEEEee-----cCCccCEEEEEEEEEEeC
Confidence 9999999999998874321 12344441 246689999999999544
No 8
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=2.8e-18 Score=151.86 Aligned_cols=125 Identities=18% Similarity=0.277 Sum_probs=92.1
Q ss_pred eeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCE----EeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEecC
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSV----EINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHD 293 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~----~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D 293 (364)
....|+|+|++|++|++.|.+|.+||||++.+++. ....+|.++.+++||+||+.|.|.+. +....|.|+|||+|
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~-~~~~~L~~~V~d~d 84 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL-PQRHRILFEVFDEN 84 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEEC-TTTCEEEEEEEECC
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEc-CCCCEEEEEEEECC
Confidence 34678999999999999999999999999998641 13445677899999999999999987 55678999999999
Q ss_pred CCCCCceeEEEEeeccccccccCC-------CccccccccccCCCCCceEEEEEEEEee
Q psy4890 294 SVSKDDYIGMTEMDLESRFYSRHR-------GSCARWTSDLEVSGSSPGEVLPGITLQS 345 (364)
Q Consensus 294 ~iskDD~IGet~IdLenr~~s~~~-------a~~gL~p~~y~~~G~~~GEIllSL~fq~ 345 (364)
.+++|++||++.|+|.++...... .|+.|.+. ...+..+|+|+++|+|..
T Consensus 85 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~--~~~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 85 RLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPR--SHKSRVKGYLRLKMTYLP 141 (176)
T ss_dssp ----CEEEEEEEEESCSCCBC------CCCCEEEECBCS--STTCCCCSEEEEEEEECC
T ss_pred CCCCCcEEEEEEEEHHHccccCCcccccccccEEEcccc--CCCCccCEEEEEEEEEEe
Confidence 999999999999999988654222 24444221 113456899999999933
No 9
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.77 E-value=3.1e-18 Score=151.09 Aligned_cols=120 Identities=18% Similarity=0.300 Sum_probs=95.0
Q ss_pred ceeEEEEEEEEEecCCCCCCC----------CCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecCCCCeEE
Q psy4890 217 KVNVTIRVYIVRAYGLHPKDK----------DGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLT 286 (364)
Q Consensus 217 p~~~~LrV~Vv~A~dL~p~D~----------~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~ 286 (364)
.....|+|+|++|++|+++|. +|.+||||++.++++.. .+|+++++|+||+|||.|.|.+.. ...|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~-~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRV-GQTSTKQKTNKPTYNEEFCANVTD--GGHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEE-EECCCCSSCSSCEEEEEEEEEEEE--ECEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEee-EEeeecCCCCCCccCcEEEEEcCC--CCEEE
Confidence 456789999999999999983 36799999999988653 244668999999999999999863 46899
Q ss_pred EEEEecCCCCCCceeEEEEeecccccccc-CCCccccccccccCCCCCceEEEEEEEEe
Q psy4890 287 VEIKDHDSVSKDDYIGMTEMDLESRFYSR-HRGSCARWTSDLEVSGSSPGEVLPGITLQ 344 (364)
Q Consensus 287 V~V~D~D~iskDD~IGet~IdLenr~~s~-~~a~~gL~p~~y~~~G~~~GEIllSL~fq 344 (364)
|+|||+|.+++||+||++.|+|+++.... .+.. . ..||.++ .+|+|++.++++
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~--~-~~W~~L~--~~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTGASDT--F-EGWVDLE--PEGKVFVVITLT 156 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSE--E-EEEEECB--SSCEEEEEEEEC
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCc--c-cEEEECC--CCcEEEEEEEEE
Confidence 99999999999999999999999875420 1111 1 3344443 389999999985
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=7.6e-18 Score=140.15 Aligned_cols=93 Identities=23% Similarity=0.319 Sum_probs=79.7
Q ss_pred EEEEEEEEEecCCCCC---CCCCCCCcEEEEEECCE-EeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEecCCC
Q psy4890 220 VTIRVYIVRAYGLHPK---DKDGKCDPYIVLKTGSV-EINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSV 295 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~---D~~G~sDPYV~I~Lg~~-~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~i 295 (364)
..|+|+|++|++|+++ |.+|.+||||++.+++. ....+|+++.+++||+||+.|.|.+..+....|.|+|||+|.+
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~ 82 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYV 82 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSS
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCC
Confidence 4688999999999984 66799999999999852 2333556789999999999999999777888999999999988
Q ss_pred CCCceeEEEEeecccccc
Q psy4890 296 SKDDYIGMTEMDLESRFY 313 (364)
Q Consensus 296 skDD~IGet~IdLenr~~ 313 (364)
+|++||++.|+|.++..
T Consensus 83 -~~~~iG~~~i~l~~l~~ 99 (126)
T 1rlw_A 83 -MDETLGTATFTVSSMKV 99 (126)
T ss_dssp -CCEEEEEEEEEGGGSCT
T ss_pred -CCceeEEEEEEHHHccC
Confidence 59999999999988753
No 11
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=2.9e-17 Score=146.32 Aligned_cols=119 Identities=12% Similarity=0.147 Sum_probs=91.1
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEecCCCCCC
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVSKD 298 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~iskD 298 (364)
...|+|+|++|++|++.+..+.+||||++.++++..+| .++.+++||+||+.|.|.+. ....|.|+|||+|.+++|
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT--~v~~~tlnP~Wne~f~f~v~--~~~~L~~~V~D~d~~~~d 110 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKT--EKCNNTNSPKWKQPLTVIVT--PVSKLHFRVWSHQTLKSD 110 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEEC--CCCSSCSSCEEEEEEEEEEC--TTCEEEEEEEECCSSSCC
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEc--cccCCCCCCeECCEEEEEeC--CCCEEEEEEEECCCCCCC
Confidence 45689999999999954445569999999998855544 66889999999999999884 388999999999999999
Q ss_pred ceeEEEEeeccccccccCC--C----ccccccccccCCCCCceEEEEEEEE
Q psy4890 299 DYIGMTEMDLESRFYSRHR--G----SCARWTSDLEVSGSSPGEVLPGITL 343 (364)
Q Consensus 299 D~IGet~IdLenr~~s~~~--a----~~gL~p~~y~~~G~~~GEIllSL~f 343 (364)
++||++.|+|.++...... . |..|... ......+|+|.++|++
T Consensus 111 d~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~--~~~~~~~G~L~v~l~~ 159 (173)
T 2nq3_A 111 VLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD--KEPTETIGDLSICLDG 159 (173)
T ss_dssp EEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES--SCTTSEEEEEEEEEES
T ss_pred ceEEEEEEEHHHhcccCCCCcceeEEEEECccC--CCCCcccEEEEEEEee
Confidence 9999999999887542111 1 2222111 1123468999999998
No 12
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.68 E-value=1.2e-17 Score=146.23 Aligned_cols=94 Identities=15% Similarity=0.161 Sum_probs=81.0
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---E-EeeeeeeeecCCCCCccceEEEEEeecC--CCCeEEEEEEec
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---V-EINDRENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEIKDH 292 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~-~~~tkt~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V~D~ 292 (364)
...|+|.|++|+||+++|.+|.+||||++++.+ . ..+.+|+++++|+||+|||+|.|.+... ....|.|+|||+
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~ 121 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTT 121 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEEC
Confidence 346789999999999999999999999999864 2 2245667889999999999999997542 267899999999
Q ss_pred CCCCCCceeEEEEeeccccc
Q psy4890 293 DSVSKDDYIGMTEMDLESRF 312 (364)
Q Consensus 293 D~iskDD~IGet~IdLenr~ 312 (364)
|.+++|++||++.|+|.+..
T Consensus 122 d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 122 DRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp CTTSCEEEEEEEEEECTTSC
T ss_pred CCCCCCcEEEEEEEEHHHcc
Confidence 99999999999999999874
No 13
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.68 E-value=1.8e-16 Score=134.94 Aligned_cols=117 Identities=19% Similarity=0.207 Sum_probs=84.1
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEecCCCCCCc
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVSKDD 299 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~iskDD 299 (364)
..|+|+|++|++|+. +|.+||||+++.. ..++++ ...+++||+|||.|.|.+.. .+..|.|+|||+| +++||
T Consensus 5 ~~L~V~V~~A~~l~~---~g~~DPYv~v~~~--~~kt~~-~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d-~~~dd 76 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---QEKFNTYVTLKVQ--NVKSTT-IAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG-LIWDT 76 (131)
T ss_dssp EEEEEEEEEEECSSC---GGGCEEEEEEEET--TEEEEC-CCEESSSCEEEEEEEEEECC-CSSEEEEEEEECC-SSCEE
T ss_pred eEEEEEEEEeECCCC---CCCcCeEEEEEec--CEEEeE-ecCCCCCceECCEEEEEEeC-CCCeEEEEEEECC-CCCCC
Confidence 468899999998852 6899999999922 222322 23479999999999999874 4567999999999 88999
Q ss_pred eeEEEEeeccccccccCCCccccccccccC---CCCCceE-------EEEEEEEe
Q psy4890 300 YIGMTEMDLESRFYSRHRGSCARWTSDLEV---SGSSPGE-------VLPGITLQ 344 (364)
Q Consensus 300 ~IGet~IdLenr~~s~~~a~~gL~p~~y~~---~G~~~GE-------IllSL~fq 344 (364)
+||++.|+|.++.......+..+.|.+|.+ +|..+|+ +++.+.|+
T Consensus 77 ~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~~ 131 (131)
T 2cjt_A 77 MVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 131 (131)
T ss_dssp EEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEEC
T ss_pred eEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEeC
Confidence 999999999987654333444555666653 4555555 88888774
No 14
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.68 E-value=1.9e-16 Score=134.41 Aligned_cols=95 Identities=14% Similarity=0.183 Sum_probs=79.6
Q ss_pred eeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEE-eecC--CCCeEEEEEEe
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQ-GSFP--TDAKLTVEIKD 291 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~-v~~p--~~~~L~V~V~D 291 (364)
....|+|+|++|+||++ +.+|.+||||++.+.. .....+|+++++++||+|||.|.|. +... ....|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 34568899999999997 7789999999999832 2233456778999999999999999 6532 46899999999
Q ss_pred cCCCCCCceeEEEEeecccccc
Q psy4890 292 HDSVSKDDYIGMTEMDLESRFY 313 (364)
Q Consensus 292 ~D~iskDD~IGet~IdLenr~~ 313 (364)
+|.+++|++||++.|+|.++..
T Consensus 97 ~d~~~~~~~lG~~~i~l~~l~~ 118 (134)
T 2b3r_A 97 AESLRENFFLGGITLPLKDFNL 118 (134)
T ss_dssp CCSSSCCEEEEEEEEEGGGSCT
T ss_pred CCCCCCCcEEEEEEEEhhhccC
Confidence 9999999999999999998754
No 15
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.67 E-value=1.4e-16 Score=136.91 Aligned_cols=94 Identities=28% Similarity=0.416 Sum_probs=80.5
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEEeecC-CCCeEEEEEEecCCC
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQGSFP-TDAKLTVEIKDHDSV 295 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~v~~p-~~~~L~V~V~D~D~i 295 (364)
..|+|+|++|++|++.|.+|.+||||++++.. .....+|.++.+++||+||++|.|.+..+ ....|.|+|||+|.+
T Consensus 31 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~ 110 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 110 (149)
T ss_dssp SEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCCC
Confidence 35889999999999999999999999999863 12334557789999999999999998643 256899999999999
Q ss_pred CCCceeEEEEeecccccc
Q psy4890 296 SKDDYIGMTEMDLESRFY 313 (364)
Q Consensus 296 skDD~IGet~IdLenr~~ 313 (364)
++|++||++.|+|.++..
T Consensus 111 ~~~~~iG~~~i~l~~l~~ 128 (149)
T 1a25_A 111 SRNDFMGSLSFGISELQK 128 (149)
T ss_dssp SCCEEEEEEEEEHHHHTT
T ss_pred CCCCEEEEEEEEHHHhCc
Confidence 999999999999998754
No 16
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=1.1e-16 Score=133.72 Aligned_cols=96 Identities=17% Similarity=0.307 Sum_probs=75.3
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEEeecC---CCCeEEEEEEec
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQGSFP---TDAKLTVEIKDH 292 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~v~~p---~~~~L~V~V~D~ 292 (364)
...|+|+|++|++|++.|.+|.+||||++.+.. .....+|.++++++||+||+.|.|.+..+ ....|.|+|||+
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 356789999999999999999999999999832 12334556789999999999999985322 367999999999
Q ss_pred CCCCC--CceeEEEEeeccccccc
Q psy4890 293 DSVSK--DDYIGMTEMDLESRFYS 314 (364)
Q Consensus 293 D~isk--DD~IGet~IdLenr~~s 314 (364)
|.+++ |++||++.|+|.+....
T Consensus 97 d~~~~~~~~~lG~~~i~l~~l~~~ 120 (129)
T 2bwq_A 97 ARVREEESEFLGEILIELETALLD 120 (129)
T ss_dssp -------CEEEEEEEEEGGGCCCS
T ss_pred CcCcCcCCceeEEEEEEccccCCC
Confidence 99987 99999999999987643
No 17
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.66 E-value=3.2e-16 Score=147.59 Aligned_cols=125 Identities=18% Similarity=0.266 Sum_probs=97.2
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCE-EeeeeeeeecCCCCCccceEEEEEeecC--CCCeEEEEEEecCCC
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSV-EINDRENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEIKDHDSV 295 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~-~~~tkt~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V~D~D~i 295 (364)
...|+|+|++|++|+++|.+|.+||||++.+++. ....+|+++.+++||+||+.|.|.+..+ ....|.|+|||+|.+
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~ 97 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRF 97 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCC
Confidence 3567899999999999999999999999998642 2233457788999999999999998643 357999999999999
Q ss_pred CCCceeEEEEeecccccccc-CCCccccccccccCCCCCceEEEEEEEEe
Q psy4890 296 SKDDYIGMTEMDLESRFYSR-HRGSCARWTSDLEVSGSSPGEVLPGITLQ 344 (364)
Q Consensus 296 skDD~IGet~IdLenr~~s~-~~a~~gL~p~~y~~~G~~~GEIllSL~fq 344 (364)
++|++||++.|+|.++..+. ...|..|.+.. .......|+|.+++.|.
T Consensus 98 ~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~-~~~~~~~G~i~l~l~~~ 146 (284)
T 2r83_A 98 SKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAE-KEEQEKLGDICFSLRYV 146 (284)
T ss_dssp SCCCEEEEEEEEGGGCCCSSCEEEEEECBCCS-SCCCCCCCEEEEEEEEE
T ss_pred CCCceeEEEEEcchhcccCCcceeEEEeeccc-cccccccccEEEEEEec
Confidence 99999999999999875432 23344452211 11224689999999984
No 18
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.66 E-value=2.1e-16 Score=133.06 Aligned_cols=103 Identities=24% Similarity=0.393 Sum_probs=84.2
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEEeecC-CCCeEEEEEEecCCC
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQGSFP-TDAKLTVEIKDHDSV 295 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~v~~p-~~~~L~V~V~D~D~i 295 (364)
..|+|+|++|++|++.|.+|.+||||++.+.. .....+|.++.+++||.||+.|.|.+..+ ....|.|+|||+|.+
T Consensus 16 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~ 95 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRT 95 (137)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCCC
Confidence 46789999999999999999999999999832 23344557789999999999999998643 346899999999999
Q ss_pred CCCceeEEEEeeccccccccCCCcccc
Q psy4890 296 SKDDYIGMTEMDLESRFYSRHRGSCAR 322 (364)
Q Consensus 296 skDD~IGet~IdLenr~~s~~~a~~gL 322 (364)
++|++||++.|+|.++.......|..|
T Consensus 96 ~~~~~iG~~~i~l~~l~~~~~~~W~~L 122 (137)
T 3rdl_A 96 TRNDFMGSLSFGVSELMKMPASGWYKL 122 (137)
T ss_dssp SCCEEEEEEEEEHHHHHHSCEEEEEEC
T ss_pred CCCceEEEEEEeHHHhccCccCceEEC
Confidence 999999999999998764433344444
No 19
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.66 E-value=7.6e-17 Score=138.47 Aligned_cols=105 Identities=11% Similarity=0.213 Sum_probs=84.8
Q ss_pred eEEEEEEEEEecCCCCCC-CCCCCCcEEEEEECCE---EeeeeeeeecCCCCCccceEEEEEeecC--CCCeEEEEEEec
Q psy4890 219 NVTIRVYIVRAYGLHPKD-KDGKCDPYIVLKTGSV---EINDRENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEIKDH 292 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D-~~G~sDPYV~I~Lg~~---~~~tkt~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V~D~ 292 (364)
...|+|+|++|++|++.| .+|.+||||++.+... ....+|.++++++||+||+.|.|.+... ....|.|+|||+
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~ 101 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHH 101 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEEC
Confidence 345789999999999998 5899999999998632 1244567789999999999999997643 256799999999
Q ss_pred CCCCCCceeEEEEeeccccccc-cCCCccccc
Q psy4890 293 DSVSKDDYIGMTEMDLESRFYS-RHRGSCARW 323 (364)
Q Consensus 293 D~iskDD~IGet~IdLenr~~s-~~~a~~gL~ 323 (364)
|.+++|++||++.|+|.+...+ ....|..|.
T Consensus 102 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 133 (148)
T 3fdw_A 102 GRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLH 133 (148)
T ss_dssp CGGGCEEEEEEEEEEHHHHHHHCCSEEEEECB
T ss_pred CCCcCCcEEEEEEEEcccccccCCccceEECc
Confidence 9999999999999999887654 333455553
No 20
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=1.8e-16 Score=136.81 Aligned_cols=95 Identities=23% Similarity=0.347 Sum_probs=80.8
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-EEeeeeeeeecCCCCCccceEEEEEeecC--CCCeEEEEEEecCCC
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS-VEINDRENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEIKDHDSV 295 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~-~~~~tkt~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V~D~D~i 295 (364)
...|+|+|++|++|++.|.+|.+||||++.+.. .....+|.++.+++||+||+.|.|.+..+ ....|.|+|||+|.+
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~ 120 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRF 120 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSS
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCC
Confidence 346789999999999999999999999999842 22334567789999999999999987543 468999999999999
Q ss_pred CCCceeEEEEeecccccc
Q psy4890 296 SKDDYIGMTEMDLESRFY 313 (364)
Q Consensus 296 skDD~IGet~IdLenr~~ 313 (364)
++|++||++.|+|.++..
T Consensus 121 ~~~~~iG~~~i~l~~l~~ 138 (152)
T 1rsy_A 121 SKHDIIGEFKVPMNTVDF 138 (152)
T ss_dssp SCCEEEEEEEEEGGGCCC
T ss_pred CCCcEEEEEEEEchhccC
Confidence 999999999999998744
No 21
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=2.4e-16 Score=134.13 Aligned_cols=96 Identities=23% Similarity=0.309 Sum_probs=80.0
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-EEeeeeeeeecCCCCCccceEEEEEeecC---CCCeEEEEEEecCC
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS-VEINDRENYVTNQINPYFGRHFEIQGSFP---TDAKLTVEIKDHDS 294 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~-~~~~tkt~~i~~tlnP~wne~Fef~v~~p---~~~~L~V~V~D~D~ 294 (364)
...|+|+|++|++|++.|.+|.+||||++.+.+ .....+|+++.+++||+||+.|.|.+..+ ....|.|+|||+|.
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 104 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR 104 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC
Confidence 345789999999999999999999999999842 22234556789999999999999985311 36789999999999
Q ss_pred CCCCceeEEEEeeccccccc
Q psy4890 295 VSKDDYIGMTEMDLESRFYS 314 (364)
Q Consensus 295 iskDD~IGet~IdLenr~~s 314 (364)
+++|++||++.|+|.++..+
T Consensus 105 ~~~~~~iG~~~i~l~~l~~~ 124 (141)
T 2d8k_A 105 FSRNDPIGEVSIPLNKVDLT 124 (141)
T ss_dssp SSSCEEEEEEEEETTTSCTT
T ss_pred CCCCcEEEEEEEEhhhhcCC
Confidence 99999999999999987543
No 22
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.65 E-value=1.7e-16 Score=135.19 Aligned_cols=95 Identities=23% Similarity=0.347 Sum_probs=80.6
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-EEeeeeeeeecCCCCCccceEEEEEeecC--CCCeEEEEEEecCCC
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS-VEINDRENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEIKDHDSV 295 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~-~~~~tkt~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V~D~D~i 295 (364)
...|+|+|++|++|++.|.+|.+||||++.+.. .....+|.++.+++||+||+.|.|.+..+ ....|.|+|||+|.+
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~ 112 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRF 112 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSS
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCC
Confidence 345789999999999999999999999999832 22344557789999999999999998643 358999999999999
Q ss_pred CCCceeEEEEeecccccc
Q psy4890 296 SKDDYIGMTEMDLESRFY 313 (364)
Q Consensus 296 skDD~IGet~IdLenr~~ 313 (364)
++|++||++.|+|.++..
T Consensus 113 ~~~~~iG~~~i~l~~l~~ 130 (143)
T 3f04_A 113 SKHDIIGEFKVPMNTVDF 130 (143)
T ss_dssp SCCEEEEEEEEEGGGCCT
T ss_pred CCCceEEEEEEEHHHccC
Confidence 999999999999998754
No 23
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=8.5e-17 Score=136.64 Aligned_cols=93 Identities=26% Similarity=0.420 Sum_probs=79.8
Q ss_pred EEEEEEEEecCCCCCCCCCCCCcEEEEEECCEE------------eeeeeeeecCCCCCccceEEEEE-eecC--CCCeE
Q psy4890 221 TIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVE------------INDRENYVTNQINPYFGRHFEIQ-GSFP--TDAKL 285 (364)
Q Consensus 221 ~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~------------~~tkt~~i~~tlnP~wne~Fef~-v~~p--~~~~L 285 (364)
.|+|+|++|++|+++|.+|.+||||++.+++.. ...+|.++.+++||+||+.|.|. +... ....|
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l 98 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTL 98 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEE
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEE
Confidence 578999999999999999999999999997532 23466778899999999999997 5432 46799
Q ss_pred EEEEEecCCCCCCceeEEEEeecccccc
Q psy4890 286 TVEIKDHDSVSKDDYIGMTEMDLESRFY 313 (364)
Q Consensus 286 ~V~V~D~D~iskDD~IGet~IdLenr~~ 313 (364)
.|+|||+|.+++|++||++.|+|.++..
T Consensus 99 ~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 126 (142)
T 1rh8_A 99 EVTVWDYDRFSSNDFLGEVLIDLSSTSH 126 (142)
T ss_dssp EEEEEEECSSSCEEEEEEEEEETTSCGG
T ss_pred EEEEEECCCCCCCceEEEEEEecccccc
Confidence 9999999999999999999999998754
No 24
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=1.1e-16 Score=135.34 Aligned_cols=103 Identities=16% Similarity=0.250 Sum_probs=82.3
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEEe-ecC--CCCeEEEEEEecC
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQG-SFP--TDAKLTVEIKDHD 293 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~v-~~p--~~~~L~V~V~D~D 293 (364)
..|+|+|++|++|+++|.+|.+||||++.+.. .....+|.++.+++||+||+.|.|.+ ... ....|.|+|||+|
T Consensus 21 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 100 (141)
T 1v27_A 21 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 100 (141)
T ss_dssp TEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBC
T ss_pred CEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECC
Confidence 46789999999999999999999999999832 12334557789999999999999984 322 3589999999999
Q ss_pred CCCC--CceeEEEEeeccccccccCCCcccc
Q psy4890 294 SVSK--DDYIGMTEMDLESRFYSRHRGSCAR 322 (364)
Q Consensus 294 ~isk--DD~IGet~IdLenr~~s~~~a~~gL 322 (364)
.+++ |++||++.|+|.++.......|..|
T Consensus 101 ~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L 131 (141)
T 1v27_A 101 RVREEESEFLGEILIELETALLDDEPHWYKL 131 (141)
T ss_dssp SSSSCCBCCCEEEEEEGGGCCCSSEEEEEEC
T ss_pred CCcCCCCceEEEEEEEccccCCCCCCceEEC
Confidence 9987 9999999999998754332334433
No 25
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.65 E-value=9e-16 Score=134.34 Aligned_cols=92 Identities=22% Similarity=0.356 Sum_probs=79.6
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECCE---EeeeeeeeecCCCCCccceEEEEEeecC--CCCeEEEEEEecCC
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSV---EINDRENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEIKDHDS 294 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~---~~~tkt~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V~D~D~ 294 (364)
..|+|+|++|++|++.|.+|.+||||++.+++. ....+|.++.+++||+||++|.|.+..+ ....|.|+|||+|.
T Consensus 37 ~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 116 (166)
T 2cm5_A 37 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI 116 (166)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC
Confidence 357899999999999999999999999998652 2344667789999999999999998643 36799999999999
Q ss_pred CCCCceeEEEEeecccc
Q psy4890 295 VSKDDYIGMTEMDLESR 311 (364)
Q Consensus 295 iskDD~IGet~IdLenr 311 (364)
+++|++||++.|+|.+.
T Consensus 117 ~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 117 GKSNDYIGGCQLGISAK 133 (166)
T ss_dssp SSCCEEEEEEEEETTCC
T ss_pred CCCCcEEEeEEEecccC
Confidence 99999999999999864
No 26
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=4.8e-16 Score=132.18 Aligned_cols=102 Identities=19% Similarity=0.263 Sum_probs=80.7
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECCE---EeeeeeeeecCCCCCccceEEEEEeecC--CCCeEEEEEEecCC
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSV---EINDRENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEIKDHDS 294 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~---~~~tkt~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V~D~D~ 294 (364)
..|+|+|++|++|+++|.+| +||||++.+... ....+|.++.+++||+||+.|.|.+... ....|.|+|||+|.
T Consensus 24 ~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 102 (142)
T 2dmg_A 24 NKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGG 102 (142)
T ss_dssp TEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCC
T ss_pred CEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCC
Confidence 45789999999999999999 999999998431 1344567789999999999999997532 24689999999998
Q ss_pred CCC--CceeEEEEeeccccccc-cCCCcccc
Q psy4890 295 VSK--DDYIGMTEMDLESRFYS-RHRGSCAR 322 (364)
Q Consensus 295 isk--DD~IGet~IdLenr~~s-~~~a~~gL 322 (364)
+++ |++||++.|+|.+...+ ....|..|
T Consensus 103 ~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L 133 (142)
T 2dmg_A 103 FLSKDKGLLGKVLVALASEELAKGWTQWYDL 133 (142)
T ss_dssp SSCCSCCCCEEEEEECCCSTTTTCBCCBCCC
T ss_pred ccccCCcEEEEEEEecccccccccccceeec
Confidence 863 57999999999887553 23344444
No 27
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.64 E-value=1e-15 Score=155.34 Aligned_cols=123 Identities=22% Similarity=0.278 Sum_probs=101.3
Q ss_pred eeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEecCCCCC
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVSK 297 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~isk 297 (364)
....|+|+|++|++|++.|.+|.+||||++.+++...+| .++.+++||+||+.|.|.+..+....|.|+|||+|.+++
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T--~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~ 462 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTT--RTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSP 462 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEEC--CCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSS
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccC--CccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCC
Confidence 345789999999999999999999999999998876655 568999999999999999987777889999999999999
Q ss_pred CceeEEEEeeccccccccCCCccccccccccCCCCCceEEEEEEEEe
Q psy4890 298 DDYIGMTEMDLESRFYSRHRGSCARWTSDLEVSGSSPGEVLPGITLQ 344 (364)
Q Consensus 298 DD~IGet~IdLenr~~s~~~a~~gL~p~~y~~~G~~~GEIllSL~fq 344 (364)
||+||++.++|.++.... .....+ ..++...+...|+|.+++.++
T Consensus 463 ~d~lG~~~~~l~~l~~~~-~~~~~~-~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 463 DDFLGRTEIPVAKIRTEQ-ESKGPM-TRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CCEEEEEEEEHHHHHHHH-HHHCSC-CEEEECBSSSSCEEEEEEEEE
T ss_pred CCceEEEEEEHHHhcccc-CCCCce-eeeecCCCCCCceEEEEEEEE
Confidence 999999999998775421 101112 345555677889999998874
No 28
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=3.9e-16 Score=132.30 Aligned_cols=96 Identities=24% Similarity=0.327 Sum_probs=80.2
Q ss_pred eEEEEEEEEEecCCCCCCCC-CCCCcEEEEEECC-EEeeeeeeeecCCCCCccceEEEEE-eecC--CCCeEEEEEEecC
Q psy4890 219 NVTIRVYIVRAYGLHPKDKD-GKCDPYIVLKTGS-VEINDRENYVTNQINPYFGRHFEIQ-GSFP--TDAKLTVEIKDHD 293 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~-G~sDPYV~I~Lg~-~~~~tkt~~i~~tlnP~wne~Fef~-v~~p--~~~~L~V~V~D~D 293 (364)
...|+|+|++|++|+++|.+ |.+||||++.+.+ .....+|.++.+++||+||+.|.|. +... ....|.|+|||+|
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d 100 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFD 100 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECC
Confidence 34678999999999999985 8999999999853 2234455778899999999999996 5432 3578999999999
Q ss_pred CCCCCceeEEEEeeccccccc
Q psy4890 294 SVSKDDYIGMTEMDLESRFYS 314 (364)
Q Consensus 294 ~iskDD~IGet~IdLenr~~s 314 (364)
.+++|++||++.|+|.++..+
T Consensus 101 ~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 101 RFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp SSCCCCCCEEEEEECTTCCCT
T ss_pred CCCCCcEEEEEEEehhHccCC
Confidence 999999999999999987653
No 29
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.63 E-value=9.3e-16 Score=133.17 Aligned_cols=91 Identities=25% Similarity=0.427 Sum_probs=78.8
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEEeecCC--CCeEEEEEEecCC
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQGSFPT--DAKLTVEIKDHDS 294 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~v~~p~--~~~L~V~V~D~D~ 294 (364)
..|+|+|++|+||++.|.+|.+||||++.++. .....+|.++.+++||+||++|.|.+..+. ...|.|+|||+|.
T Consensus 25 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 104 (159)
T 1tjx_A 25 GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 104 (159)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC
Confidence 35789999999999999999999999999852 233456678899999999999999986442 5689999999999
Q ss_pred CCCCceeEEEEeeccc
Q psy4890 295 VSKDDYIGMTEMDLES 310 (364)
Q Consensus 295 iskDD~IGet~IdLen 310 (364)
+++|++||++.|+|..
T Consensus 105 ~~~~~~iG~~~i~l~~ 120 (159)
T 1tjx_A 105 IGKNDAIGKVFVGYNS 120 (159)
T ss_dssp SSCCEEEEEEEEETTC
T ss_pred CCCCceEEEEEECCCC
Confidence 9999999999999985
No 30
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=1.4e-15 Score=129.61 Aligned_cols=91 Identities=16% Similarity=0.261 Sum_probs=77.2
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEEC--CEEeeeeeeeecCCCCCccceEEEEEeecC--CCCeEEEEEEecCCC
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTG--SVEINDRENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEIKDHDSV 295 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg--~~~~~tkt~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V~D~D~i 295 (364)
..|+|+|++|+ ++|.+|.+||||++.+. ......+|+++++++||+|||+|.|.+... ....|.|+|||+|.+
T Consensus 26 ~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~ 102 (138)
T 1wfm_A 26 AELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRF 102 (138)
T ss_dssp TEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSS
T ss_pred CEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCC
Confidence 45789999999 47888999999999984 234445677899999999999999997643 257899999999999
Q ss_pred CCCceeEEEEeecccccc
Q psy4890 296 SKDDYIGMTEMDLESRFY 313 (364)
Q Consensus 296 skDD~IGet~IdLenr~~ 313 (364)
++|++||++.|+|.++..
T Consensus 103 ~~dd~lG~~~i~l~~l~~ 120 (138)
T 1wfm_A 103 SRHSVAGELRLGLDGTSV 120 (138)
T ss_dssp CTTSCSEEEEEESSSSSS
T ss_pred CCCcEEEEEEEEcccccC
Confidence 999999999999998753
No 31
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.63 E-value=4.8e-16 Score=137.37 Aligned_cols=102 Identities=18% Similarity=0.238 Sum_probs=83.2
Q ss_pred EEEEEEEEEecCCCCCCC-CCCCCcEEEEEECCE---EeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEE-ecCC
Q psy4890 220 VTIRVYIVRAYGLHPKDK-DGKCDPYIVLKTGSV---EINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIK-DHDS 294 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~-~G~sDPYV~I~Lg~~---~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~-D~D~ 294 (364)
..|+|+|++|++|+++|. +|.+||||++.+... ....+|.++.+++||+|||+|.|.+. +....|.|+|| |+|.
T Consensus 30 ~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~-~~~~~L~~~V~~d~d~ 108 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDES-PQGKVLQVIVWGDYGR 108 (171)
T ss_dssp TEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSC-CTTEEEEEEEEEECST
T ss_pred CEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEec-CCCCEEEEEEEEcCCC
Confidence 457899999999999996 799999999998531 23446678899999999999999985 45789999999 9999
Q ss_pred CCCCceeEEEEeeccccccc-cCCCcccc
Q psy4890 295 VSKDDYIGMTEMDLESRFYS-RHRGSCAR 322 (364)
Q Consensus 295 iskDD~IGet~IdLenr~~s-~~~a~~gL 322 (364)
+++|++||++.|+|.++..+ ....|..|
T Consensus 109 ~~~d~~iG~~~i~l~~l~~~~~~~~W~~L 137 (171)
T 2q3x_A 109 MDHKCFMGVAQILLEELDLSSMVIGWYKL 137 (171)
T ss_dssp TCSSEEEEEEEECGGGSCTTSCEEEEEEC
T ss_pred CCCCCEEEEEEEEHHHcccCCCcceeEEC
Confidence 99999999999999987643 23345555
No 32
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.63 E-value=5.1e-16 Score=130.58 Aligned_cols=93 Identities=23% Similarity=0.357 Sum_probs=79.8
Q ss_pred eeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEEeecCC--CCeEEEEEEec
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQGSFPT--DAKLTVEIKDH 292 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~v~~p~--~~~L~V~V~D~ 292 (364)
....|+|+|++|++|++.|.+|.+||||++.+++ .....+|.++.+++||+||++|.|.+..+. ...|.|+|||+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~ 93 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDK 93 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEEC
T ss_pred CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEEC
Confidence 3456889999999999999999999999999853 234556678899999999999999976433 36899999999
Q ss_pred CCCCCCceeEEEEeeccc
Q psy4890 293 DSVSKDDYIGMTEMDLES 310 (364)
Q Consensus 293 D~iskDD~IGet~IdLen 310 (364)
|.+++|++||++.|+|.+
T Consensus 94 ~~~~~~~~lG~~~i~l~~ 111 (138)
T 3n5a_A 94 DKLSRNDVIGKIYLSWKS 111 (138)
T ss_dssp CSSSCCEEEEEEEESSSS
T ss_pred CCCCCCcEEEEEEEcccc
Confidence 999999999999999986
No 33
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.63 E-value=3.8e-16 Score=132.83 Aligned_cols=95 Identities=25% Similarity=0.412 Sum_probs=79.5
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEE-eecC--CCCeEEEEEEec
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQ-GSFP--TDAKLTVEIKDH 292 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~-v~~p--~~~~L~V~V~D~ 292 (364)
...|+|+|++|++|++.+.+|.+||||++.+++ .....+|+++.+++||+||+.|.|. +... ....|.|+|||+
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 107 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDE 107 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEEC
Confidence 346789999999999999999999999999864 1233455778899999999999998 4321 147899999999
Q ss_pred CCCCCCceeEEEEeecccccc
Q psy4890 293 DSVSKDDYIGMTEMDLESRFY 313 (364)
Q Consensus 293 D~iskDD~IGet~IdLenr~~ 313 (364)
|.+++|++||++.|+|.++..
T Consensus 108 d~~~~d~~iG~~~i~l~~l~~ 128 (142)
T 2chd_A 108 DKFGHNEFIGETRFSLKKLKA 128 (142)
T ss_dssp CTTSCEEEEEEEEEEGGGCCT
T ss_pred CCCCCCcEEEEEEEEHHHcCC
Confidence 999999999999999998754
No 34
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.63 E-value=8.6e-16 Score=132.38 Aligned_cols=92 Identities=17% Similarity=0.261 Sum_probs=73.5
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEEC--CEE-eeeeeeeecCCCCCccceEEEEEeecCC--CCeEEEEEEecC
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTG--SVE-INDRENYVTNQINPYFGRHFEIQGSFPT--DAKLTVEIKDHD 293 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg--~~~-~~tkt~~i~~tlnP~wne~Fef~v~~p~--~~~L~V~V~D~D 293 (364)
...|+|+|++|++|++.|.+|.+||||++.+. +.. ...+|.++.+++||+||++|.|.+..+. ...|.|+|||+|
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d 108 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSE 108 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCC
Confidence 34678999999999999999999999999983 332 3456778899999999999999986543 468999999999
Q ss_pred CCCCCceeEEEEeeccc
Q psy4890 294 SVSKDDYIGMTEMDLES 310 (364)
Q Consensus 294 ~iskDD~IGet~IdLen 310 (364)
.+++|++||++.|+|.+
T Consensus 109 ~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 109 RGSRNEVIGRLVLGATA 125 (153)
T ss_dssp TTSCCEEEEEEEESTTC
T ss_pred CCCCCcEEEEEEECCCC
Confidence 99999999999999977
No 35
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.63 E-value=1.7e-15 Score=134.39 Aligned_cols=120 Identities=18% Similarity=0.167 Sum_probs=87.9
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEecCCCCCCc
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVSKDD 299 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~iskDD 299 (364)
..|+|+|++|++++ .+|.+||||+++. +..++++ ...+++||+|||.|.|.+.. .+..|.|+|||+| +++||
T Consensus 14 ~~L~V~V~~A~~l~---~~g~~DPYV~v~~--~~~kt~~-~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 14 SLLCVGVKKAKFDG---AQEKFNTYVTLKV--QNVESTT-IAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp CEEEEEEEEEECSS---CGGGCEEEEEEEE--TTEEEEC-CCEESSSCEEEEEEEEECCC-TTSEEEEEEEECC-SSCCE
T ss_pred EEEEEEEEEEECCC---CCCCCCeEEEEEe--cceEEEE-ecCCCCCCCCCCEEEEEeeC-CCCEEEEEEEECC-CCCCc
Confidence 56889999999884 3689999999992 2233322 22469999999999999974 4567999999999 88999
Q ss_pred eeEEEEeeccccccccCCCcccccccccc---CCCC-------CceEEEEEEEEeecc
Q psy4890 300 YIGMTEMDLESRFYSRHRGSCARWTSDLE---VSGS-------SPGEVLPGITLQSGE 347 (364)
Q Consensus 300 ~IGet~IdLenr~~s~~~a~~gL~p~~y~---~~G~-------~~GEIllSL~fq~g~ 347 (364)
+||++.|+|.++.......+..+.+.+|. .+|. ..|.|++.++++.++
T Consensus 86 ~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~~ 143 (167)
T 2cjs_A 86 MVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELPL 143 (167)
T ss_dssp EEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCC
T ss_pred eEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecCC
Confidence 99999999998754332233344445554 2343 345588889987664
No 36
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.62 E-value=5.4e-16 Score=134.15 Aligned_cols=96 Identities=22% Similarity=0.360 Sum_probs=79.6
Q ss_pred cceeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEEeecC-CCCeEEEEEEe
Q psy4890 216 EKVNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQGSFP-TDAKLTVEIKD 291 (364)
Q Consensus 216 ~p~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~v~~p-~~~~L~V~V~D 291 (364)
.+....|+|+|++|++|++.| +|.+||||++.+.. .....+|.++++++||+||++|.|.+... ....|.|+|||
T Consensus 23 ~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d 101 (153)
T 3fbk_A 23 DAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWN 101 (153)
T ss_dssp EESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEE
T ss_pred ECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEe
Confidence 345567899999999999999 69999999999842 22344567789999999999999998432 23569999999
Q ss_pred cCCCCC-CceeEEEEeeccccc
Q psy4890 292 HDSVSK-DDYIGMTEMDLESRF 312 (364)
Q Consensus 292 ~D~isk-DD~IGet~IdLenr~ 312 (364)
+|.+++ |++||++.|+|.++.
T Consensus 102 ~d~~~~~d~~lG~~~i~l~~l~ 123 (153)
T 3fbk_A 102 RASQSRQSGLIGCMSFGVKSLL 123 (153)
T ss_dssp CCSSGGGCEEEEEEEEEHHHHT
T ss_pred CCCCCCCCcEEEEEEEEHHHhc
Confidence 999887 999999999998875
No 37
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.59 E-value=6.8e-15 Score=140.26 Aligned_cols=124 Identities=21% Similarity=0.265 Sum_probs=93.0
Q ss_pred eeEEEEEEEEEecCCCCCCCCCCCCcEEEEEEC---CEEeeeeeeeecCCCCCccceEEEEEeecCC--CCeEEEEEEec
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTG---SVEINDRENYVTNQINPYFGRHFEIQGSFPT--DAKLTVEIKDH 292 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg---~~~~~tkt~~i~~tlnP~wne~Fef~v~~p~--~~~L~V~V~D~ 292 (364)
....|+|+|++|++|+++|.+|.+||||++.+. .+.. +|.++.+++||+||++|.|.+..+. ...|.|+|||+
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~--kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~ 95 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKF--QTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDF 95 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCE--ECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeE--eCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEc
Confidence 345688999999999999999999999999983 3333 4567899999999999999986443 56899999999
Q ss_pred CCCCCCceeEEEEee-cccccc-c-cCCCccccccccccCCCCCceEEEEEEEEee
Q psy4890 293 DSVSKDDYIGMTEMD-LESRFY-S-RHRGSCARWTSDLEVSGSSPGEVLPGITLQS 345 (364)
Q Consensus 293 D~iskDD~IGet~Id-Lenr~~-s-~~~a~~gL~p~~y~~~G~~~GEIllSL~fq~ 345 (364)
|.+++|++||++.|+ |.+... . ....|..|.+. .......|+|+++++|..
T Consensus 96 d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~--~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 96 DRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEG--GSEKADLGELNFSLCYLP 149 (296)
T ss_dssp CSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCC--SSCCSCCCEEEEEEEEET
T ss_pred CCCCCCceEEEEEeccccccccCCccceeeeccccc--cccccccceEEEEEEecc
Confidence 999999999999996 333221 1 12234444211 112346799999999943
No 38
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.58 E-value=9.3e-15 Score=151.51 Aligned_cols=109 Identities=25% Similarity=0.277 Sum_probs=93.0
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEe-ecCCCCeEEEEEEecCCCCC
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQG-SFPTDAKLTVEIKDHDSVSK 297 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v-~~p~~~~L~V~V~D~D~isk 297 (364)
...|+|.|++|++|++ |.+|++||||+|.++++.. +|+++.+++||+||+.|.|.. .++....|.|+|||+|.+++
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~--kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~ 469 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEF--RTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWD 469 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEE--ECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSC
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEee--eeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCC
Confidence 3578999999999998 9999999999999998764 556799999999999999986 45678899999999999999
Q ss_pred CceeEEEEeeccccccccCCCccccccccccCCCCCceEEEEEEEE
Q psy4890 298 DDYIGMTEMDLESRFYSRHRGSCARWTSDLEVSGSSPGEVLPGITL 343 (364)
Q Consensus 298 DD~IGet~IdLenr~~s~~~a~~gL~p~~y~~~G~~~GEIllSL~f 343 (364)
||+||++.++|... .+..+|.| +.|+|.+++..
T Consensus 470 dD~LG~~~~~L~~g---~~~~~~~l----------~~G~l~~~~~~ 502 (540)
T 3nsj_A 470 DDLLGSCDRSPHSG---FHEVTCEL----------NHGRVKFSYHA 502 (540)
T ss_dssp CEEEEEEEECCCSE---EEEEEEEC----------SSSEEEEEEEE
T ss_pred CCEEEEEEEEeeCC---cEEEEEEc----------CCeEEEEEEEE
Confidence 99999999999843 23456655 56999998876
No 39
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=1.2e-15 Score=130.68 Aligned_cols=95 Identities=18% Similarity=0.275 Sum_probs=77.7
Q ss_pred EEEEEEEEEecCCCCC-CCC------CCCCcEEEEEECC-EEeeeeeeeecCCCCCccceEEEEEeecC--CCCeEEEEE
Q psy4890 220 VTIRVYIVRAYGLHPK-DKD------GKCDPYIVLKTGS-VEINDRENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEI 289 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~-D~~------G~sDPYV~I~Lg~-~~~~tkt~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V 289 (364)
..|+|+|++|++|++. |.+ |.+||||++.+.. .....+|.++++++||+|||.|.|.+..+ ....|.|+|
T Consensus 26 ~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V 105 (147)
T 2enp_A 26 NHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTV 105 (147)
T ss_dssp TEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEE
T ss_pred CEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEE
Confidence 4578999999999984 544 5899999999863 12234567789999999999999987532 246899999
Q ss_pred EecCCCCCCceeEEEEeeccccccc
Q psy4890 290 KDHDSVSKDDYIGMTEMDLESRFYS 314 (364)
Q Consensus 290 ~D~D~iskDD~IGet~IdLenr~~s 314 (364)
||+|.+++|++||++.|+|.++...
T Consensus 106 ~d~d~~~~~~~iG~~~i~l~~l~~~ 130 (147)
T 2enp_A 106 VDFDKFSRHCVIGKVSVPLCEVDLV 130 (147)
T ss_dssp ECCSTTCCSCCCEEEEEETTTSCTT
T ss_pred EECCCCcCCcEEEEEEEechhcCCC
Confidence 9999999999999999999987543
No 40
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.54 E-value=3e-14 Score=149.98 Aligned_cols=186 Identities=23% Similarity=0.289 Sum_probs=124.6
Q ss_pred eeeecCCCCcCC-cccCC--------------CccccccccccccccccCCCCCccccceeeEEEeeEEEeecC-CCCCC
Q psy4890 134 CNIVPPKNELEL-VPEFE--------------HFADVLQTFDFYYGKLFSNNKNTLAEMKVGSFKGNVMFYPAD-RDHLV 197 (364)
Q Consensus 134 ~~lkvy~~eLE~-~~~F~--------------~f~d~~~tf~L~rGk~~~~~~~~~~~~~vG~fKg~f~iyp~p-~~~~~ 197 (364)
.-++||+.-+.- ...|+ |||.+...+.|.+|++..++ -.|.+ +.|.. .+...
T Consensus 414 ~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~g~F~~ng-------~~GYv-----lKP~~lr~~~~ 481 (624)
T 1djx_A 414 CLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNG-------GCGYV-----LKPAFLRDPNT 481 (624)
T ss_dssp SCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTTCCSHHHHHHHHHHHSGG-------GCSEE-----ECCGGGGCTTC
T ss_pred cceeeccCCccCCCCCCCchHHhhccceeeeecccCCchHHhHHHHHhhcCC-------CCccE-----ECCHHHcCCCC
Confidence 446788766541 23443 46777777788888887654 12332 23321 11110
Q ss_pred CCCCCccccccccccCCCcceeEEEEEEEEEecCCCCCCC--CCCCCcEEEEEECC---EEeeeeeeeecCC-CCCccce
Q psy4890 198 TFSGKPLSNGALQESIDNEKVNVTIRVYIVRAYGLHPKDK--DGKCDPYIVLKTGS---VEINDRENYVTNQ-INPYFGR 271 (364)
Q Consensus 198 ~~~~~~~~~~l~~~yp~~~p~~~~LrV~Vv~A~dL~p~D~--~G~sDPYV~I~Lg~---~~~~tkt~~i~~t-lnP~wne 271 (364)
.. .|.....+ | +.....|+|+|++|++|++.+. +|.+||||+|.+.+ ...+.+|++++++ +||+||+
T Consensus 482 ~f-~p~~~~~~----~--~~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE 554 (624)
T 1djx_A 482 TF-NSRALTQG----P--WWRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDM 554 (624)
T ss_dssp CC-CTTSCCSS----T--TCCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEE
T ss_pred Cc-Cccccccc----C--CccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCc
Confidence 11 11111111 2 2355778999999999999884 78999999999843 1233455678887 9999999
Q ss_pred EEEEEeecCCCCeEEEEEEecCCCCCCceeEEEEeeccccccccCCCccccccccccCCCC--CceEEEEEEEEe
Q psy4890 272 HFEIQGSFPTDAKLTVEIKDHDSVSKDDYIGMTEMDLESRFYSRHRGSCARWTSDLEVSGS--SPGEVLPGITLQ 344 (364)
Q Consensus 272 ~Fef~v~~p~~~~L~V~V~D~D~iskDD~IGet~IdLenr~~s~~~a~~gL~p~~y~~~G~--~~GEIllSL~fq 344 (364)
.|+|.+..|....|.|+|||+|.+++|++||++.|+|..+..+ .+ +..| ++..|. ..|.|++.+.+.
T Consensus 555 ~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G-~r-~v~L----~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 555 EFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQG-YR-HVHL----LSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp EEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCE-EE-EEEE----ECTTSCEEEEEEEEEEEEEE
T ss_pred eEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCC-cE-EEeC----CCCCcCCCCceEEEEEEEEE
Confidence 9999998887789999999999999999999999999986431 22 3333 333443 358888888874
No 41
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.50 E-value=6.3e-14 Score=131.84 Aligned_cols=93 Identities=25% Similarity=0.418 Sum_probs=80.0
Q ss_pred eeEEEEEEEEEecCCCCCCCCCCCCcEEEEEEC--C-EEeeeeeeeecCCCCCccceEEEEEeecCC--CCeEEEEEEec
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTG--S-VEINDRENYVTNQINPYFGRHFEIQGSFPT--DAKLTVEIKDH 292 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg--~-~~~~tkt~~i~~tlnP~wne~Fef~v~~p~--~~~L~V~V~D~ 292 (364)
....|+|.|++|++|++.|.+|.+||||++.+. + .....+|.++.+++||+||+.|.|.+..+. ...|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 344688999999999999999999999999984 2 234556778899999999999999986543 45799999999
Q ss_pred CCCCCCceeEEEEeeccc
Q psy4890 293 DSVSKDDYIGMTEMDLES 310 (364)
Q Consensus 293 D~iskDD~IGet~IdLen 310 (364)
|.+++|++||++.|+|..
T Consensus 228 d~~~~~~~iG~~~i~l~~ 245 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNS 245 (284)
T ss_dssp CSSSCCCEEEEEEEETTC
T ss_pred CCCCCCcEEEEEEECCCC
Confidence 999999999999999975
No 42
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.39 E-value=8.8e-14 Score=132.55 Aligned_cols=93 Identities=20% Similarity=0.328 Sum_probs=79.7
Q ss_pred eEEEEEEEEEecCCCCCCCCCCCCcEEEEEECC--E-EeeeeeeeecCCCCCccceEEEEEeecCC--CCeEEEEEEecC
Q psy4890 219 NVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS--V-EINDRENYVTNQINPYFGRHFEIQGSFPT--DAKLTVEIKDHD 293 (364)
Q Consensus 219 ~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~--~-~~~tkt~~i~~tlnP~wne~Fef~v~~p~--~~~L~V~V~D~D 293 (364)
...|+|+|++|++|+++|.+|.+||||++++.. + ..+.+|.++.+++||+||+.|.|.+..+. ...|.|+|||+|
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 230 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYD 230 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECC
T ss_pred cceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCC
Confidence 457889999999999999999999999999862 1 23446678899999999999999886443 567999999999
Q ss_pred CCCCCceeEEEEeecccc
Q psy4890 294 SVSKDDYIGMTEMDLESR 311 (364)
Q Consensus 294 ~iskDD~IGet~IdLenr 311 (364)
.+++|++||++.|+|...
T Consensus 231 ~~~~~~~iG~~~i~l~~~ 248 (296)
T 1dqv_A 231 CIGHNEVIGVCRVGPEAA 248 (296)
T ss_dssp SSSCCEEEEECCCSSCTT
T ss_pred CCCCCceEEEEEECCccC
Confidence 999999999999999764
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.39 E-value=3.1e-13 Score=144.59 Aligned_cols=105 Identities=20% Similarity=0.276 Sum_probs=87.6
Q ss_pred ceeEEEEEEEEEecCCCC---CCCCCCCCcEEEEEECCE-EeeeeeeeecCCCCCccceEEEEEeecCCCCeEEEEEEec
Q psy4890 217 KVNVTIRVYIVRAYGLHP---KDKDGKCDPYIVLKTGSV-EINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDH 292 (364)
Q Consensus 217 p~~~~LrV~Vv~A~dL~p---~D~~G~sDPYV~I~Lg~~-~~~tkt~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~ 292 (364)
+....|+|+|++|++|++ +|.+|.+||||++.+++. ..+.+|+++.+++||+|||+|.|.+..+....|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 345778999999999999 888899999999999842 2334557789999999999999999877788999999999
Q ss_pred CCCCCCceeEEEEeeccccccc-cCCCcccc
Q psy4890 293 DSVSKDDYIGMTEMDLESRFYS-RHRGSCAR 322 (364)
Q Consensus 293 D~iskDD~IGet~IdLenr~~s-~~~a~~gL 322 (364)
|.++ |++||++.|+|.++... .+..|+.|
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L 124 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIF 124 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEE
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEec
Confidence 9998 99999999999987543 23345555
No 44
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.37 E-value=3.1e-12 Score=111.04 Aligned_cols=116 Identities=13% Similarity=0.110 Sum_probs=90.0
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeec-CCCCCccceEEEEEeecCC--CCeEEEEEEecCCCC
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVT-NQINPYFGRHFEIQGSFPT--DAKLTVEIKDHDSVS 296 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~-~tlnP~wne~Fef~v~~p~--~~~L~V~V~D~D~is 296 (364)
-.|+|.|.+|.||+ |++|||+++..-+.+.+| +++. ++.||+|||.|++.+.-|. ...|.|.|+|++.++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kT--kvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~ 93 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFRGQSFYS--RVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVF 93 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEETTEEEEC--CCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTS
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEeccceee--EEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcccc
Confidence 45788999999998 589999999997766666 4576 6999999999999986553 678999999999999
Q ss_pred CCceeEEEEeeccccccccCCC-ccccccccccCCC-CCceEEEEEEEEeec
Q psy4890 297 KDDYIGMTEMDLESRFYSRHRG-SCARWTSDLEVSG-SSPGEVLPGITLQSG 346 (364)
Q Consensus 297 kDD~IGet~IdLenr~~s~~~a-~~gL~p~~y~~~G-~~~GEIllSL~fq~g 346 (364)
+|.+||++.|+|.+...+.+.. +-.| .+..+ +..++|.++|+|+.-
T Consensus 94 ~nrlIG~~~i~Lq~lv~~~~l~l~~~L----vD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVEENRVEVSDTL----IDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp CCEEEEEEEEESHHHHHHSEEEEEEEE----ECTTSCEEEEEEEEEEEEEET
T ss_pred CCCEEEEEEEEhHHhccCCeEEEeecc----cCCCCCccccEEEEEEEecCC
Confidence 9999999999998776543221 1112 11122 335899999999763
No 45
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.20 E-value=2.1e-11 Score=128.87 Aligned_cols=95 Identities=27% Similarity=0.425 Sum_probs=79.8
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---EEeeeeeeeecCCCCCccceEEEEEeecC-CCCeEEEEEEecCCC
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGS---VEINDRENYVTNQINPYFGRHFEIQGSFP-TDAKLTVEIKDHDSV 295 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~---~~~~tkt~~i~~tlnP~wne~Fef~v~~p-~~~~L~V~V~D~D~i 295 (364)
..|+|.|++|++|.++|.+|.+||||++.+.. ...+.+|.++++++||+||+.|.|.+... ....|.|+|||+|.+
T Consensus 172 ~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~ 251 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 251 (674)
T ss_dssp SEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSS
T ss_pred ceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccc
Confidence 34788999999999999999999999999831 22344567789999999999999988643 356799999999999
Q ss_pred CCCceeEEEEeeccccccc
Q psy4890 296 SKDDYIGMTEMDLESRFYS 314 (364)
Q Consensus 296 skDD~IGet~IdLenr~~s 314 (364)
++||+||++.++|.++...
T Consensus 252 ~~dd~iG~~~i~l~~l~~~ 270 (674)
T 3pfq_A 252 SRNDFMGSLSFGISELQKA 270 (674)
T ss_dssp SCCEECCBCCCBTTHHHHC
T ss_pred cccccccccccchhhhccC
Confidence 9999999999999876543
No 46
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.17 E-value=3e-12 Score=130.83 Aligned_cols=123 Identities=18% Similarity=0.216 Sum_probs=18.7
Q ss_pred eeEEEEEEEEEecCCCCCCCCCCCCcEEEEEECCEEeeeeeeeecCC---CCCccceEEEEEeecCCCCeEEEEEEec-C
Q psy4890 218 VNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQ---INPYFGRHFEIQGSFPTDAKLTVEIKDH-D 293 (364)
Q Consensus 218 ~~~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~Lg~~~~~tkt~~i~~t---lnP~wne~Fef~v~~p~~~~L~V~V~D~-D 293 (364)
....|+|.|++|++|+++| ||||++.+++... .||+++.+| +||+|||.|+|.+. |....|.|+|||. |
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~-~kT~v~~kt~~glnP~WnE~F~f~~~-~~~~~L~v~V~d~~d 81 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDDMLY-ARTTSKPRSASGDTVFWGEHFEFNNL-PAVRALRLHLYRDSD 81 (483)
T ss_dssp EEECC---------------------------------------------------CCEECC------------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEE-eeeeEEeCCCCCCCCccccEEEEecC-CCccEEEEEEEecCC
Confidence 3456889999999999987 9999999976432 355668888 99999999999874 4468899999994 5
Q ss_pred ---CCCCCceeEEEEeeccccccc-cCCCccccccc-cccC------------------CC-CCceEEEEEEEEeecc
Q psy4890 294 ---SVSKDDYIGMTEMDLESRFYS-RHRGSCARWTS-DLEV------------------SG-SSPGEVLPGITLQSGE 347 (364)
Q Consensus 294 ---~iskDD~IGet~IdLenr~~s-~~~a~~gL~p~-~y~~------------------~G-~~~GEIllSL~fq~g~ 347 (364)
..++|++||++.|+|.+.... ....|..|... .... .+ ...|+|++.+.|+...
T Consensus 82 ~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 82 KKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMS 159 (483)
T ss_dssp -------------------------CCEECC--------------------------------------CEEEEEECC
T ss_pred ccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeee
Confidence 378999999999999887543 23345555211 1000 01 2469999999997764
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.14 E-value=8.6e-11 Score=127.74 Aligned_cols=162 Identities=15% Similarity=0.156 Sum_probs=108.6
Q ss_pred CccccccccccccccccCCCCCccccceeeEEEeeEEEeecC-CCCCCCCCCCccccccccccCCCcceeEEEEEEEEEe
Q psy4890 151 HFADVLQTFDFYYGKLFSNNKNTLAEMKVGSFKGNVMFYPAD-RDHLVTFSGKPLSNGALQESIDNEKVNVTIRVYIVRA 229 (364)
Q Consensus 151 ~f~d~~~tf~L~rGk~~~~~~~~~~~~~vG~fKg~f~iyp~p-~~~~~~~~~~~~~~~l~~~yp~~~p~~~~LrV~Vv~A 229 (364)
|||.+...+.|++|++..++ -.|. .+.|.- .++...+.| .... +...+....|+|.|++|
T Consensus 674 N~QT~d~~m~lN~g~F~~nG-------~cGY-----VLKP~~lr~~~~~f~p-~~~~------~~~~~~~~~L~V~Visa 734 (885)
T 3ohm_B 674 NFQTLDVAMQLNAGVFEYNG-------RSGY-----LLKPEFMRRPDKSFDP-FTEV------IVDGIVANALRVKVISG 734 (885)
T ss_dssp CTTCCSHHHHHHHHHHTTGG-------GCSE-----EECCGGGTCTTCCCCT-TCSS------CCTTCCCEEEEEEEEEE
T ss_pred cCCCCCcccchhhhhhccCC-------ceee-----eecCHHHcCCCcCcCC-CcCc------ccCcccceEEEEEEEEe
Confidence 78888999999999997765 1343 233421 111111101 0000 11133456789999999
Q ss_pred cCCCCCCCCCCCCcEEEEEECC----EEeeeeeeeecC-CCCCccce-EEEEE-eecCCCCeEEEEEEecCCCCCCceeE
Q psy4890 230 YGLHPKDKDGKCDPYIVLKTGS----VEINDRENYVTN-QINPYFGR-HFEIQ-GSFPTDAKLTVEIKDHDSVSKDDYIG 302 (364)
Q Consensus 230 ~dL~p~D~~G~sDPYV~I~Lg~----~~~~tkt~~i~~-tlnP~wne-~Fef~-v~~p~~~~L~V~V~D~D~iskDD~IG 302 (364)
++|+.. .+||||+|.+.+ ...+.+|+++.+ ++||+||+ +|.|. +..|....|.|+|||+| ||+||
T Consensus 735 q~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d----ddfiG 806 (885)
T 3ohm_B 735 QFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG----GKFVG 806 (885)
T ss_dssp ESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT----TEEEE
T ss_pred ccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC----ccEEe
Confidence 999853 589999999853 112234566665 69999999 69998 77788889999999987 89999
Q ss_pred EEEeeccccccccCCCccccccccccCCCC--CceEEEEEEEEee
Q psy4890 303 MTEMDLESRFYSRHRGSCARWTSDLEVSGS--SPGEVLPGITLQS 345 (364)
Q Consensus 303 et~IdLenr~~s~~~a~~gL~p~~y~~~G~--~~GEIllSL~fq~ 345 (364)
++.|+|..+.. .+| +..| ++..|. ..|.|.+.+++..
T Consensus 807 ~~~lpL~~L~~-GyR-~vpL----~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 807 HRILPVSAIRS-GYH-YVCL----RNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp EEEEETTTCCC-EEE-EEEE----ECTTSCEEEEEEEEEEEEEEE
T ss_pred eEEEEHHHcCC-Cce-EEEe----cCCCCCccCceEEEEEEEEEe
Confidence 99999987643 222 2223 333443 4789999999865
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.14 E-value=2.7e-10 Score=123.00 Aligned_cols=174 Identities=18% Similarity=0.201 Sum_probs=108.6
Q ss_pred CccccccccccccccccCCCCCccccceeeEEEeeEEEeecC-CCCCCCCCCCccccccccccCCCcceeEEEEEEEEEe
Q psy4890 151 HFADVLQTFDFYYGKLFSNNKNTLAEMKVGSFKGNVMFYPAD-RDHLVTFSGKPLSNGALQESIDNEKVNVTIRVYIVRA 229 (364)
Q Consensus 151 ~f~d~~~tf~L~rGk~~~~~~~~~~~~~vG~fKg~f~iyp~p-~~~~~~~~~~~~~~~l~~~yp~~~p~~~~LrV~Vv~A 229 (364)
|||.+...+.|++|++..++. .|.+ +.|.. .+......| +... +........|+|.|++|
T Consensus 599 N~QT~d~~m~LN~g~F~~nG~-------cGYV-----LKP~~lr~~~~~f~p---~~~~----~~~~~~~~~L~V~Visa 659 (816)
T 3qr0_A 599 NFQCFDIAMCVNLGVFEYNGC-------SGYL-----LKPEFMRKLDKRFDP---FTES----TVDGVVAGTIEIKIISA 659 (816)
T ss_dssp CTTCCSHHHHHHHHHTTTTTT-------CSEE-----ECCHHHHCTTCCCCT---TCCS----CCTTSCCEEEEEEEEEE
T ss_pred cCcCCChhhhhhhhhhccCCc-------eeee-----ecChHhcCCCcccCC---CCCC----CcCCccceEEEEEEEEc
Confidence 688888899999999977651 3332 23320 011111101 1110 11233456789999999
Q ss_pred cCCCCCCCCCCCCcEEEEEECC-----EEeeeeeeeecC-CCCCccceE-EEEE-eecCCCCeEEEEEEecCCCCCCcee
Q psy4890 230 YGLHPKDKDGKCDPYIVLKTGS-----VEINDRENYVTN-QINPYFGRH-FEIQ-GSFPTDAKLTVEIKDHDSVSKDDYI 301 (364)
Q Consensus 230 ~dL~p~D~~G~sDPYV~I~Lg~-----~~~~tkt~~i~~-tlnP~wne~-Fef~-v~~p~~~~L~V~V~D~D~iskDD~I 301 (364)
++|+.. .+||||+|.+.+ ...+.+|+++.+ ++||+||+. |.|. +..|.-..|+|.|||+| ||+|
T Consensus 660 q~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d----ddfi 731 (816)
T 3qr0_A 660 QFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN----GKFI 731 (816)
T ss_dssp ECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT----SCEE
T ss_pred ccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC----CCee
Confidence 999753 589999999853 113335566665 699999997 9998 77787789999999985 8999
Q ss_pred EEEEeeccccccccCCCccccccccccCCCC--CceEEEEEEEEeecccCCCCccceeee
Q psy4890 302 GMTEMDLESRFYSRHRGSCARWTSDLEVSGS--SPGEVLPGITLQSGEINSDPVRYWRSY 359 (364)
Q Consensus 302 Get~IdLenr~~s~~~a~~gL~p~~y~~~G~--~~GEIllSL~fq~g~~~~~~~~g~~~~ 359 (364)
|++.|+|..+.. .+| +..| ++..|. ..+.|.+.+.+..- .++.+....++
T Consensus 732 G~~~ipL~~L~~-GyR-~vpL----~~~~g~~~~~atLfv~i~~~~~--~~~~~~~~~~~ 783 (816)
T 3qr0_A 732 GHRVMPLDGIKP-GYR-HVPL----RNESNRPLGLASVFAHIVAKDY--VSDAFADFADA 783 (816)
T ss_dssp EEEEEESTTCCC-EEE-EEEE----ECTTSCEEEEEEEEEEEEEEEC--CC---------
T ss_pred eEEEEEHHHcCC-cce-EEEE----eCCCCCCCCceEEEEEEEEEec--CchhHHHHHHH
Confidence 999999987643 222 1223 333443 34788888888653 44444444443
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.08 E-value=4e-10 Score=121.72 Aligned_cols=161 Identities=13% Similarity=0.114 Sum_probs=104.9
Q ss_pred CccccccccccccccccCCCCCccccceeeEEEeeEEEeecC-CCCCCCCCCCccccccccccCCCcceeEEEEEEEEEe
Q psy4890 151 HFADVLQTFDFYYGKLFSNNKNTLAEMKVGSFKGNVMFYPAD-RDHLVTFSGKPLSNGALQESIDNEKVNVTIRVYIVRA 229 (364)
Q Consensus 151 ~f~d~~~tf~L~rGk~~~~~~~~~~~~~vG~fKg~f~iyp~p-~~~~~~~~~~~~~~~l~~~yp~~~p~~~~LrV~Vv~A 229 (364)
|||.+...+.|.+|++..++. .|.+ +.|.- ..+.....| ..-. +...+....|+|.|++|
T Consensus 627 N~Qt~d~~m~ln~g~F~~nG~-------cGYV-----lKP~~lr~~~~~f~p-~~~~------~~~~~~~~~L~V~Visa 687 (799)
T 2zkm_X 627 NFQTMDLPMQQNMAVFEFNGQ-------SGYL-----LKHEFMRRPDKQFNP-FSVD------RIDVVVATTLSITVISG 687 (799)
T ss_dssp CTTCCSHHHHHHHHHTTTGGG-------CSEE-----ECCGGGTCTTSCCCT-TSCC------TTTTTTCEEEEEEEEEE
T ss_pred ccccCchHHHHHHhhhhccCC-------CCce-----ECCHHHhCCCccCCC-cccc------cccceeeeeEEEEEEec
Confidence 688889999999999976651 3433 23421 111111101 0000 11233456789999999
Q ss_pred cCCCCCCCCCCCCcEEEEEECC----EEeeeeee-eec-CCCCCccce-EEEE-EeecCCCCeEEEEEEecCCCCCCcee
Q psy4890 230 YGLHPKDKDGKCDPYIVLKTGS----VEINDREN-YVT-NQINPYFGR-HFEI-QGSFPTDAKLTVEIKDHDSVSKDDYI 301 (364)
Q Consensus 230 ~dL~p~D~~G~sDPYV~I~Lg~----~~~~tkt~-~i~-~tlnP~wne-~Fef-~v~~p~~~~L~V~V~D~D~iskDD~I 301 (364)
++|+. +.+||||+|.+.+ ...+.+|+ ++. +++||+||+ .|.| .+..|.-..|.|.|||+| ||+|
T Consensus 688 ~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d----~d~i 759 (799)
T 2zkm_X 688 QFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG----NKFL 759 (799)
T ss_dssp ESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT----TEEE
T ss_pred cccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC----CCcc
Confidence 99985 4689999999832 11123455 455 579999999 7999 787787789999999997 8999
Q ss_pred EEEEeeccccccccCCCccccccccccCCCC--CceEEEEEEEEe
Q psy4890 302 GMTEMDLESRFYSRHRGSCARWTSDLEVSGS--SPGEVLPGITLQ 344 (364)
Q Consensus 302 Get~IdLenr~~s~~~a~~gL~p~~y~~~G~--~~GEIllSL~fq 344 (364)
|++.|+|..+.. ..+ +..| ++..|. ..+.|++.+.+.
T Consensus 760 G~~~ipl~~L~~-G~r-~v~L----~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 760 GHRIIPINALNS-GYH-HLCL----HSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEEEEEGGGBCC-EEE-EEEE----ECTTCCEEEEEEEEEEEEEE
T ss_pred ceEeeehhhcCC-CcE-EEec----cCCCCCCCCceEEEEEEEEE
Confidence 999999987643 122 2223 233332 357777777763
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.38 E-value=4.7e-06 Score=70.53 Aligned_cols=111 Identities=10% Similarity=0.170 Sum_probs=76.0
Q ss_pred EEEEEEEEEec--CCCCCCCCCCCCcEEEEEECCEEee--eee-eeecCCCCCccceEEEEEeecCCCCeEEEEEEecCC
Q psy4890 220 VTIRVYIVRAY--GLHPKDKDGKCDPYIVLKTGSVEIN--DRE-NYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDS 294 (364)
Q Consensus 220 ~~LrV~Vv~A~--dL~p~D~~G~sDPYV~I~Lg~~~~~--tkt-~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~ 294 (364)
..+||.+.++. .|++ ..-..||||.+.+...... .++ ...++|..|+||+.|.-.+. ..+.|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~--~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQA--EDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY--EGRVIQIVLMRAAE 81 (126)
T ss_dssp CEEEEEEEEEECSSCCC--SSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC--TTCEEEEEEEEETT
T ss_pred ccEEeeeccccccccCC--ccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee--CCEEEEEEEEcCCC
Confidence 34677765544 3443 2346899999987543322 122 45678999999999998874 68899999996543
Q ss_pred CCCCceeEEEEeeccccccc--cCCCccccccccccCCCCCceEEEEEEEE
Q psy4890 295 VSKDDYIGMTEMDLESRFYS--RHRGSCARWTSDLEVSGSSPGEVLPGITL 343 (364)
Q Consensus 295 iskDD~IGet~IdLenr~~s--~~~a~~gL~p~~y~~~G~~~GEIllSL~f 343 (364)
+++.++.|.++++... +..+...+| ++-..+|+|++.+.|
T Consensus 82 ----~fvAn~tV~~edL~~~c~~~~g~~e~W-----vdLeP~Gkl~~~i~~ 123 (126)
T 1yrk_A 82 ----EPVSEVTVGVSVLAERCKKNNGKAEFW-----LDLQPQAKVLMSVQY 123 (126)
T ss_dssp ----EEEEEEEEEHHHHHHHHHTTTTEEEEE-----EECBSSCEEEEEEEE
T ss_pred ----CeeeEEEEEHHHHHhhhccCCCceEEE-----EecccCcEEEEEEEE
Confidence 9999999999988643 112222332 223468999999877
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.21 E-value=6.8e-06 Score=70.49 Aligned_cols=113 Identities=14% Similarity=0.187 Sum_probs=75.7
Q ss_pred EEEEEEEEEecCCCCCC-CCCCCCcEEEEEECCEEe--eeee-eeecCCCCCccceEEEEEeecCCCCeEEEEEEecCCC
Q psy4890 220 VTIRVYIVRAYGLHPKD-KDGKCDPYIVLKTGSVEI--NDRE-NYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSV 295 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D-~~G~sDPYV~I~Lg~~~~--~tkt-~~i~~tlnP~wne~Fef~v~~p~~~~L~V~V~D~D~i 295 (364)
..+||.+.+..-.+-.. ..-..||||.|.+..... +.++ ...++|..|+||+.|.-.+. ..+.|.|.|++...
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN--KGRVMQIIVKGKNV- 86 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC--SSCEEEEEEECSSC-
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE--CCeEEEEEEEcCCC-
Confidence 34677776554322221 123589999998754322 1233 34577999999999998874 58899999995443
Q ss_pred CCCceeEEEEeeccccccc--cCCCccccccccccCCCCCceEEEEEEEE
Q psy4890 296 SKDDYIGMTEMDLESRFYS--RHRGSCARWTSDLEVSGSSPGEVLPGITL 343 (364)
Q Consensus 296 skDD~IGet~IdLenr~~s--~~~a~~gL~p~~y~~~G~~~GEIllSL~f 343 (364)
+++.++.|.++++... +..+...+| ++-..+|+|++.+.|
T Consensus 87 ---~fVAn~tV~~edL~~~ck~~~g~~e~W-----vdLeP~Gkl~v~i~~ 128 (138)
T 2enj_A 87 ---DLISETTVELYSLAERCRKNNGKTEIW-----LELKPQGRMLMNARY 128 (138)
T ss_dssp ---SCCEEEEEESHHHHHHHHHTTTCEEEE-----EECBSSCEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEE-----EecccCcEEEEEEEE
Confidence 8999999999988643 112222332 123468999999999
No 52
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=90.67 E-value=1.3 Score=48.74 Aligned_cols=102 Identities=11% Similarity=0.103 Sum_probs=66.3
Q ss_pred EEEEEEEEEecCCCCCCCCCCCCcEEEEEE--CCEEee--eeeeeecCCCCCccceEEEEEe---ecCCCCeEEEEEEec
Q psy4890 220 VTIRVYIVRAYGLHPKDKDGKCDPYIVLKT--GSVEIN--DRENYVTNQINPYFGRHFEIQG---SFPTDAKLTVEIKDH 292 (364)
Q Consensus 220 ~~LrV~Vv~A~dL~p~D~~G~sDPYV~I~L--g~~~~~--tkt~~i~~tlnP~wne~Fef~v---~~p~~~~L~V~V~D~ 292 (364)
..++|.|+.+.++... ...+-||.+.+ |++... ..|..++...+|.||+...|.+ .+|.++.|.|+||+.
T Consensus 217 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp SEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 3567889999888654 34677888765 554332 1234456677899999999876 458899999999997
Q ss_pred CCC--C----------CCceeEEEEeeccccc--cccCCCcccccc
Q psy4890 293 DSV--S----------KDDYIGMTEMDLESRF--YSRHRGSCARWT 324 (364)
Q Consensus 293 D~i--s----------kDD~IGet~IdLenr~--~s~~~a~~gL~p 324 (364)
..- + .+..||-+.++|-+.. +......+.+||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~ 339 (940)
T 2wxf_A 294 VEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMWP 339 (940)
T ss_dssp C----------------CEEEEEEEEESBCTTSBBCCEEEEEECEE
T ss_pred cCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEEee
Confidence 432 1 2458999999986532 212233456665
No 53
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=81.75 E-value=5.8 Score=43.64 Aligned_cols=102 Identities=14% Similarity=0.119 Sum_probs=62.5
Q ss_pred EEEEEEEEecC-CCCCCCCCCCCcEEEEEE--CCEEee-eeeeeecCCCCCccceEEEEEe---ecCCCCeEEEEEEecC
Q psy4890 221 TIRVYIVRAYG-LHPKDKDGKCDPYIVLKT--GSVEIN-DRENYVTNQINPYFGRHFEIQG---SFPTDAKLTVEIKDHD 293 (364)
Q Consensus 221 ~LrV~Vv~A~d-L~p~D~~G~sDPYV~I~L--g~~~~~-tkt~~i~~tlnP~wne~Fef~v---~~p~~~~L~V~V~D~D 293 (364)
.++|.|+.+.. +.+. +...+-||.+.+ |++... .+|..++-+-+|.||+...|.+ .+|.++.|.++||+..
T Consensus 219 ~f~i~i~~~~~~~~~~--~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLPR--TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EEEEEEEEEECSSCCT--TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred ceEEEEeecccccccC--CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 35666776654 2121 234577887654 554332 2344556677899999988875 4588999999999864
Q ss_pred CCC----------------CCceeEEEEeeccccc--cccCCCcccccc
Q psy4890 294 SVS----------------KDDYIGMTEMDLESRF--YSRHRGSCARWT 324 (364)
Q Consensus 294 ~is----------------kDD~IGet~IdLenr~--~s~~~a~~gL~p 324 (364)
..+ +...||-+.++|-+.. +....-.+.+||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~l~~G~~~L~lw~ 345 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFLLRHGEYVLHMWQ 345 (961)
T ss_dssp C--------------------CEEEEEEEESBCTTSBBCCEEEEEECEE
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCCCccccCCEEEEEee
Confidence 321 3447899999985532 222233455665
No 54
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=81.49 E-value=5.4 Score=44.46 Aligned_cols=102 Identities=14% Similarity=0.147 Sum_probs=64.4
Q ss_pred EEEEEEEEecCCCCCCCCCCCCcEEEEEE--CCEEee--eeeeeecCCCCCccceEEEEEe---ecCCCCeEEEEEEecC
Q psy4890 221 TIRVYIVRAYGLHPKDKDGKCDPYIVLKT--GSVEIN--DRENYVTNQINPYFGRHFEIQG---SFPTDAKLTVEIKDHD 293 (364)
Q Consensus 221 ~LrV~Vv~A~dL~p~D~~G~sDPYV~I~L--g~~~~~--tkt~~i~~tlnP~wne~Fef~v---~~p~~~~L~V~V~D~D 293 (364)
.++|.|+.+.++.... ....+-||.+.+ |++... ..|..++ ..+|.||+..+|.+ .+|.++.|.|+||+..
T Consensus 356 ~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~ 433 (1091)
T 3hhm_A 356 ALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSVK 433 (1091)
T ss_dssp EEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCC
T ss_pred CEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEec
Confidence 5688898888775432 334577888876 443221 1122223 45788999999986 4588999999999966
Q ss_pred CC----CCCceeEEEEeeccccc--cccCCCcccccc
Q psy4890 294 SV----SKDDYIGMTEMDLESRF--YSRHRGSCARWT 324 (364)
Q Consensus 294 ~i----skDD~IGet~IdLenr~--~s~~~a~~gL~p 324 (364)
.. .....||-+.++|-+-. +....-.+.+||
T Consensus 434 ~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW~ 470 (1091)
T 3hhm_A 434 GRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWP 470 (1091)
T ss_dssp CCC-------CCEEEEEESBCTTCBBCCEEEEEECEE
T ss_pred CccCcccccceeEEeeeeeEccCCeEEcCCeEEEeec
Confidence 42 12357999999986532 222333456665
No 55
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=80.54 E-value=1.9 Score=48.08 Aligned_cols=101 Identities=8% Similarity=0.071 Sum_probs=63.3
Q ss_pred EEEEEEEEecCCCCCCCCCCCCcEEEEEE--CCEEee--eeeeeecCCCCCccceEEEEEe---ecCCCCeEEEEEEecC
Q psy4890 221 TIRVYIVRAYGLHPKDKDGKCDPYIVLKT--GSVEIN--DRENYVTNQINPYFGRHFEIQG---SFPTDAKLTVEIKDHD 293 (364)
Q Consensus 221 ~LrV~Vv~A~dL~p~D~~G~sDPYV~I~L--g~~~~~--tkt~~i~~tlnP~wne~Fef~v---~~p~~~~L~V~V~D~D 293 (364)
.++|.|+.+.++... ...+-||.+.+ |++... ..|..++...+|.||+...|.+ .+|.++.|.|+||+..
T Consensus 354 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~ 430 (1092)
T 2y3a_A 354 PFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVL 430 (1092)
T ss_dssp EEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC-
T ss_pred CEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEec
Confidence 567888888888654 34567777543 655432 2234456677899999988875 4588999999999963
Q ss_pred CC----------------------CCCceeEEEEeeccccc--cccCCCcccccc
Q psy4890 294 SV----------------------SKDDYIGMTEMDLESRF--YSRHRGSCARWT 324 (364)
Q Consensus 294 ~i----------------------skDD~IGet~IdLenr~--~s~~~a~~gL~p 324 (364)
.. ..+..||-+.++|-+.. +......+.+||
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~ 485 (1092)
T 2y3a_A 431 DKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSWS 485 (1092)
T ss_dssp -----------------------------CCEEEEESBCTTCBBCCEEEECCCCT
T ss_pred CccccccccccccccccccccccccccceeEEEeeeeECCcCcccCCCeEEEEee
Confidence 11 01237899999886532 212223456666
No 56
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=63.48 E-value=22 Score=30.70 Aligned_cols=127 Identities=13% Similarity=0.152 Sum_probs=78.8
Q ss_pred cceeEEEEEEEEEecCCCCCC--CCCCCCcEEEEEECCEEeeeeeeeecCCCCCccceEEEEEeecC-------CCCeEE
Q psy4890 216 EKVNVTIRVYIVRAYGLHPKD--KDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFP-------TDAKLT 286 (364)
Q Consensus 216 ~p~~~~LrV~Vv~A~dL~p~D--~~G~sDPYV~I~Lg~~~~~tkt~~i~~tlnP~wne~Fef~v~~p-------~~~~L~ 286 (364)
++-+.++.|+|.++. +.|.. ..|..+|..-+...=-...+.+..+-.+.+|.+|-+-.+.+... +...+.
T Consensus 14 ~~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 14 ERGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp CSSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred cCCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 455677788888876 32211 12345787777665222222222345689999998877777432 145788
Q ss_pred EEEEecCCCCCCceeEEEEeeccccccccCCCccccccccccCCC--CCceEEEEEEEEeec
Q psy4890 287 VEIKDHDSVSKDDYIGMTEMDLESRFYSRHRGSCARWTSDLEVSG--SSPGEVLPGITLQSG 346 (364)
Q Consensus 287 V~V~D~D~iskDD~IGet~IdLenr~~s~~~a~~gL~p~~y~~~G--~~~GEIllSL~fq~g 346 (364)
|++..... +.-+.||.+.|+|...+....+..+.. + -..+.| .+-|.|...+++..-
T Consensus 93 lELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~-~-L~g~~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 93 LEVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTA-S-LIGTKGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEE-E-ECBSSSCCTTSEEEEEEEEEEEC
T ss_pred EEEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEE-E-EEcCCCCcceEEEEEEEEEEecc
Confidence 99988642 234689999999998875433222211 1 134556 578999998888543
No 57
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=59.93 E-value=72 Score=28.95 Aligned_cols=52 Identities=8% Similarity=0.107 Sum_probs=37.7
Q ss_pred eeeecCCCCCccceEEEEEeecC--CCCeEEEEEEecCCC----CCCceeEEEEeecc
Q psy4890 258 ENYVTNQINPYFGRHFEIQGSFP--TDAKLTVEIKDHDSV----SKDDYIGMTEMDLE 309 (364)
Q Consensus 258 t~~i~~tlnP~wne~Fef~v~~p--~~~~L~V~V~D~D~i----skDD~IGet~IdLe 309 (364)
+.+...+.+|.|+|++.+.+... ....|.+++++...- ..+..+|-+.++|-
T Consensus 81 S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 81 SVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred EEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 34556788999999999988543 357889999875321 12347899999984
Done!