Query psy4895
Match_columns 430
No_of_seqs 341 out of 2702
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 20:31:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4etm_A LMPTP, low molecular we 100.0 4.4E-41 1.5E-45 303.9 14.1 155 244-428 14-170 (173)
2 3jvi_A Protein tyrosine phosph 100.0 2.9E-40 1E-44 295.5 15.8 155 247-429 3-158 (161)
3 3n8i_A Low molecular weight ph 100.0 2.9E-40 1E-44 294.0 15.8 153 247-425 4-156 (157)
4 2cwd_A Low molecular weight ph 100.0 9.4E-39 3.2E-43 285.9 15.2 148 249-427 5-152 (161)
5 2gi4_A Possible phosphotyrosin 100.0 2.9E-39 9.9E-44 287.6 11.4 149 249-428 2-152 (156)
6 1u2p_A Ptpase, low molecular w 100.0 1.9E-38 6.6E-43 284.5 16.6 148 249-427 5-155 (163)
7 1d1q_A Tyrosine phosphatase (E 100.0 3E-38 1E-42 282.7 17.6 151 247-424 6-159 (161)
8 3rof_A Low molecular weight pr 100.0 1.3E-38 4.6E-43 283.2 14.0 148 247-428 5-153 (158)
9 4etn_A LMPTP, low molecular we 100.0 4.5E-38 1.5E-42 286.5 13.3 149 247-427 33-181 (184)
10 3tht_A Alkylated DNA repair pr 100.0 2.6E-37 8.9E-42 306.8 15.5 232 17-254 54-313 (345)
11 2wmy_A WZB, putative acid phos 100.0 4.1E-37 1.4E-41 272.1 14.1 142 248-427 8-150 (150)
12 1p8a_A Protein tyrosine phosph 100.0 2.5E-37 8.4E-42 272.4 11.8 139 249-426 5-144 (146)
13 2fek_A Low molecular weight pr 100.0 7.2E-37 2.5E-41 274.6 14.4 145 248-430 22-167 (167)
14 4egs_A Ribose 5-phosphate isom 100.0 1.7E-36 5.9E-41 275.6 14.7 145 248-425 34-180 (180)
15 2wja_A Putative acid phosphata 100.0 5.4E-37 1.9E-41 275.7 11.2 150 240-427 15-168 (168)
16 3rh0_A Arsenate reductase; oxi 100.0 4.8E-35 1.6E-39 257.4 8.8 133 240-423 14-147 (148)
17 2l17_A Synarsc, arsenate reduc 100.0 4.5E-34 1.5E-38 247.9 10.9 128 248-426 4-134 (134)
18 1jf8_A Arsenate reductase; ptp 100.0 1E-33 3.4E-38 244.7 11.3 126 249-423 4-130 (131)
19 1jl3_A Arsenate reductase; alp 100.0 3E-33 1E-37 244.3 11.3 129 249-425 4-138 (139)
20 1y1l_A Arsenate reductase (ARS 100.0 1.2E-33 4.2E-38 242.0 5.5 122 250-423 1-123 (124)
21 3t38_A Arsenate reductase; low 100.0 1.5E-31 5.1E-36 248.2 12.5 129 248-427 81-210 (213)
22 2iuw_A Alkylated repair protei 100.0 6.7E-31 2.3E-35 249.2 13.9 176 55-254 29-230 (238)
23 3s57_A Alpha-ketoglutarate-dep 100.0 3E-30 1E-34 239.1 10.4 167 63-253 9-202 (204)
24 3i3q_A Alpha-ketoglutarate-dep 100.0 3.6E-29 1.2E-33 232.3 13.0 181 59-258 3-207 (211)
25 2jig_A Prolyl-4 hydroxylase; h 97.1 0.0025 8.4E-08 58.9 10.5 159 61-219 18-203 (224)
26 3itq_A Prolyl 4-hydroxylase, a 96.9 0.0018 6.3E-08 59.6 7.1 142 62-219 38-198 (216)
27 3dkq_A PKHD-type hydroxylase S 96.7 0.0036 1.2E-07 58.7 7.5 140 62-219 18-181 (243)
28 3tht_A Alkylated DNA repair pr 96.3 0.0015 5.1E-08 64.5 2.4 56 6-61 99-155 (345)
29 3lfm_A Protein FTO; FAT MASS a 95.6 0.027 9.1E-07 56.4 7.7 106 138-272 188-328 (495)
30 2hbt_A EGL nine homolog 1; pro 93.7 1.3 4.3E-05 41.3 14.0 149 63-218 26-199 (247)
31 2iuw_A Alkylated repair protei 91.3 0.12 4E-06 48.2 3.4 32 10-41 29-63 (238)
32 4h3k_B RNA polymerase II subun 89.3 0.2 6.9E-06 45.0 3.0 104 247-364 24-140 (214)
33 3kt7_A PKHD-type hydroxylase T 86.1 7.4 0.00025 40.7 12.8 150 64-220 35-214 (633)
34 2kyr_A Fructose-like phosphotr 84.1 1.1 3.7E-05 36.5 4.4 70 245-361 3-73 (111)
35 2m1z_A LMO0427 protein; homolo 82.4 1 3.5E-05 36.4 3.5 70 250-366 4-75 (106)
36 2r4q_A Phosphotransferase syst 73.6 3.7 0.00013 33.0 4.4 64 251-361 7-70 (106)
37 2r48_A Phosphotransferase syst 71.8 3.7 0.00013 33.0 4.0 64 251-361 7-70 (106)
38 2rg4_A Uncharacterized protein 64.4 9.5 0.00033 34.4 5.7 79 138-220 101-193 (216)
39 3p9y_A CG14216, LD40846P; phos 63.8 3.1 0.0001 37.0 2.1 104 247-364 8-124 (198)
40 3czc_A RMPB; alpha/beta sandwi 62.2 3.8 0.00013 32.9 2.2 41 235-278 8-48 (110)
41 3s57_A Alpha-ketoglutarate-dep 62.2 3.8 0.00013 36.8 2.5 29 17-45 9-37 (204)
42 3nnf_A CURA; non-HAEM Fe(II)/a 52.9 8 0.00027 37.0 3.0 48 19-87 17-64 (344)
43 1tvm_A PTS system, galactitol- 51.2 14 0.00047 29.7 3.9 32 247-278 20-51 (113)
44 1vkr_A Mannitol-specific PTS s 46.7 13 0.00045 30.5 3.1 31 248-278 13-43 (125)
45 1e2b_A Enzyme IIB-cellobiose; 42.3 26 0.00087 27.8 4.1 30 248-278 3-32 (106)
46 2l2q_A PTS system, cellobiose- 35.0 42 0.0014 26.4 4.4 28 250-278 6-33 (109)
47 2eq7_C 2-oxoglutarate dehydrog 34.9 43 0.0015 21.2 3.6 30 319-348 2-36 (40)
48 1odm_A Isopenicillin N synthas 33.8 29 0.001 33.2 3.8 29 191-219 239-267 (331)
49 1m2d_A [2Fe-2S] ferredoxin; th 27.3 51 0.0017 26.0 3.6 38 248-285 2-51 (110)
50 3oox_A Putative 2OG-Fe(II) oxy 25.7 2.6E+02 0.0088 26.1 8.9 72 139-220 168-246 (312)
51 2auv_A Potential NAD-reducing 24.8 32 0.0011 25.7 1.9 29 249-277 6-34 (85)
52 3a11_A Translation initiation 21.1 1.3E+02 0.0044 29.0 5.7 77 250-359 144-220 (338)
53 1w9y_A 1-aminocyclopropane-1-c 20.6 1.6E+02 0.0053 27.9 6.2 69 141-220 156-232 (319)
54 2eq8_C Pyruvate dehydrogenase 20.4 43 0.0015 21.2 1.5 29 319-347 2-35 (40)
55 2eq9_C Pyruvate dehydrogenase 20.3 46 0.0016 21.1 1.7 29 319-347 3-36 (41)
No 1
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=100.00 E-value=4.4e-41 Score=303.87 Aligned_cols=155 Identities=36% Similarity=0.685 Sum_probs=138.6
Q ss_pred cccccceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHH
Q psy4895 244 TRAGKKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRA 323 (430)
Q Consensus 244 ~R~s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a 323 (430)
.|-++.+||||||||+|||||||+|||+++.++|+.+ .|+|+||||.+||.|+++||.|
T Consensus 14 ~~~~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~---------------------~~~v~SAGt~~~~~G~~~d~~a 72 (173)
T 4etm_A 14 GRGSMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEG---------------------KIKADSAGIGGWHIGNPPHEGT 72 (173)
T ss_dssp CCSSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTT---------------------TEEEEEEESSCTTTTCCCCHHH
T ss_pred CCCCccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCC---------------------ceEEeccccccCCCCCCCCHHH
Confidence 4557899999999999999999999999999888764 4678888888899999999999
Q ss_pred HHHHHhCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCC-CCccCCCCCC
Q psy4895 324 RDVLAKHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKG-VKIVEDPYYS 401 (430)
Q Consensus 324 ~~~L~e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~-~~di~DP~~~ 401 (430)
+++|+++|||++ |++++++++|+.+||||||||++|++.+..++|. ....|+.+|.+|.+.. ..||+||||+
T Consensus 73 ~~~l~~~Gid~s~h~ar~l~~~d~~~~DlIl~Md~~~~~~l~~~~p~------~~~~kv~~l~~~~~~~~~~dVpDPyy~ 146 (173)
T 4etm_A 73 QEILRREGISFDGMLARQVSEQDLDDFDYIIAMDAENIGSLRSMAGF------KNTSHIKRLLDYVEDSDLADVPDPYYT 146 (173)
T ss_dssp HHHHHHTTCCCTTCCCCBCCHHHHHHCSEEEESSHHHHHHHHHHHTT------SCCTTEEEGGGGSTTCSCCSCCCHHHH
T ss_pred HHHHHHCCccccCCccccCCHhhcCCCCEEEEeCchHHHHHHHHcCc------cchhheeeeccccccCCCCcCCCCCCC
Confidence 999999999997 9999999999999999999999999999988873 2357899998887653 4689999987
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4895 402 RAKDAFDICYEHCYRSCEQFLNKVEKN 428 (430)
Q Consensus 402 ~~~~~f~~~~~~I~~~i~~ll~~l~~~ 428 (430)
+ +|+++|++|+++|+.||++|+++
T Consensus 147 ~---~Fe~v~~~I~~~~~~ll~~l~~e 170 (173)
T 4etm_A 147 G---NFEEVCQLIKTGCEQLLASIQKE 170 (173)
T ss_dssp C---CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 69999999999999999999875
No 2
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=100.00 E-value=2.9e-40 Score=295.48 Aligned_cols=155 Identities=35% Similarity=0.607 Sum_probs=136.7
Q ss_pred ccceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHH
Q psy4895 247 GKKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDV 326 (430)
Q Consensus 247 s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~ 326 (430)
.+++||||||||+|||||||+|||+++.++|+.+ .++|+||||.+||+|+++||.|+++
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~---------------------~~~v~SAGt~~~~~G~~~~~~a~~~ 61 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTE---------------------KYICDSAGTCSYHEGQQADSRMRKV 61 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGG---------------------GEEEEEEESCCTTTTCBCCHHHHHH
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCC---------------------cEEEEeeecCCcccCCCCCHHHHHH
Confidence 4689999999999999999999999999887754 4778888889999999999999999
Q ss_pred HHhCCCCCCCcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCC-CCccCCCCCCCchH
Q psy4895 327 LAKHNVPCQHQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKG-VKIVEDPYYSRAKD 405 (430)
Q Consensus 327 L~e~Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~-~~di~DP~~~~~~~ 405 (430)
|+++|||++|++++++++++.+||+|||||++|++++.+.+|. ....|++++++|++.. ..+|+||||++ .+
T Consensus 62 l~~~Gid~~~~ar~l~~~~~~~~DlIl~Md~~~~~~l~~~~p~------~~~~kv~ll~~~~~~~~~~~I~DPy~~~-~~ 134 (161)
T 3jvi_A 62 GKSRGYQVDSISRPVVSSDFKNFDYIFAMDNDNYYELLDRCPE------QYKQKIFKMVDFCTTIKTTEVPDPYYGG-EK 134 (161)
T ss_dssp HHHTTCCCCCBCCBCCHHHHHHCSEEEESSHHHHHHHHHHSCG------GGGGGEEEGGGGCSSCCCSSCCCCC--C-HH
T ss_pred HHHcCcCCCCeeeECCHHHhcCCCEEEEeChHHHHHHHHhcCc------cccceEEehhhhcCCcCCCCCcCCCCCC-HH
Confidence 9999999999999999999999999999999999999888762 1247999999998752 46899999985 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Q psy4895 406 AFDICYEHCYRSCEQFLNKVEKNE 429 (430)
Q Consensus 406 ~f~~~~~~I~~~i~~ll~~l~~~~ 429 (430)
+|++++++|+++|+.|+++|+++.
T Consensus 135 ~f~~~~~~I~~~~~~ll~~l~~~~ 158 (161)
T 3jvi_A 135 GFHRVIDILEDACENLIIKLEEGK 158 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998753
No 3
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=100.00 E-value=2.9e-40 Score=294.03 Aligned_cols=153 Identities=44% Similarity=0.890 Sum_probs=136.2
Q ss_pred ccceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHH
Q psy4895 247 GKKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDV 326 (430)
Q Consensus 247 s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~ 326 (430)
+.++|||||+||+|||||||+|||++++++|+.+ .++|+||||.+||+|+++||.|+++
T Consensus 4 ~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~---------------------~~~v~SAGt~~~~~G~~~~~~a~~~ 62 (157)
T 3n8i_A 4 ATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISE---------------------NWRVDSAATSGYEIGNPPDYRGQSC 62 (157)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGG---------------------GEEEEEEESSSTTTTCCCCHHHHHH
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCC---------------------cEEEEeeecCccccCCCCCHHHHHH
Confidence 3578999999999999999999999999887753 4788888889999999999999999
Q ss_pred HHhCCCCCCCcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchHH
Q psy4895 327 LAKHNVPCQHQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKDA 406 (430)
Q Consensus 327 L~e~Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~~ 406 (430)
|+++|||++|++++++++++.+||||||||++|++.+.+++|.. ....+|+.++++|++....+|+||||++ .++
T Consensus 63 l~~~Gid~~~~ar~l~~~~~~~~DlIi~M~~~n~~~l~~~~p~~----~~~~~kv~ll~~~~~~~~~dVpDPy~~~-~~~ 137 (157)
T 3n8i_A 63 MKRHGIPMSHVARQITKEDFATFDYILCMDESNLRDLNRKSNQV----KTCKAKIELLGSYDPQKQLIIEDPYYGN-DSD 137 (157)
T ss_dssp HHHTTCCCCCCCCBCCHHHHHHCSEEEESSHHHHHHHHHHHTTS----SCCCCEEEEGGGGCTTCCCCCCCCTTSC-HHH
T ss_pred HHHcCcCCCCceeECCHHHcCCCCEEEEeCcHHHHHHHHHCCCc----cCccceEEEHHHhCcCCCCCCCCCCCCC-HHH
Confidence 99999999999999999999999999999999999999988720 0135799999999876546899999985 778
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy4895 407 FDICYEHCYRSCEQFLNKV 425 (430)
Q Consensus 407 f~~~~~~I~~~i~~ll~~l 425 (430)
|+++|++|+++|+.|++++
T Consensus 138 F~~v~~~I~~~~~~ll~~~ 156 (157)
T 3n8i_A 138 FETVYQQCVRCCRAFLEKA 156 (157)
T ss_dssp HHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999864
No 4
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=9.4e-39 Score=285.87 Aligned_cols=148 Identities=40% Similarity=0.641 Sum_probs=132.6
Q ss_pred ceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHH
Q psy4895 249 KAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLA 328 (430)
Q Consensus 249 t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~ 328 (430)
.+||||||||+|||||||+|||++++++|+.+ +|+|+||||.+||+|+++||.|+++|+
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~---------------------~~~v~SAGt~~~~~g~~~~p~a~~~l~ 63 (161)
T 2cwd_A 5 VRVLFVCLGNICRSPMAEGIFRKLLKERGLED---------------------RFEVDSAGTGAWHVGEPMDPRARRVLE 63 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHHTCTT---------------------TEEEEEEESSCTTTTCCCCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHHHHHHcCCCC---------------------cEEEEecccCCCccCCCCCHHHHHHHH
Confidence 58999999999999999999999998877654 477888888999999999999999999
Q ss_pred hCCCCCCCcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchHHHH
Q psy4895 329 KHNVPCQHQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKDAFD 408 (430)
Q Consensus 329 e~Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~~f~ 408 (430)
++|||++|++++++++++.+||+|||||++|++.+.+.+|. ...|+.+|.+|+.. .+|+||||++ .++|+
T Consensus 64 e~Gid~s~~ar~l~~~~~~~~DlIi~M~~~~~~~l~~~~p~-------~~~kv~~l~~~~~~--~~i~DP~~~~-~~~f~ 133 (161)
T 2cwd_A 64 EEGAYFPHVARRLTREDVLAYDHILVMDRENLEEVLRRFPE-------ARGKVRLVLEELGG--GEVQDPYYGD-LEDFR 133 (161)
T ss_dssp HHTCCCCCCCCBCCHHHHHHCSEEEESSHHHHHHHHHHCGG-------GTTTEEEGGGGGTC--CCCCCCTTSC-HHHHH
T ss_pred HcCcCccccccCCCHhHhccCCEEEECChHHHHHHHHHCCC-------ccCcEEeehhhcCC--CCCCCCCCCC-HHHHH
Confidence 99999998899999999999999999999999988888874 23688888898632 4799999985 89999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy4895 409 ICYEHCYRSCEQFLNKVEK 427 (430)
Q Consensus 409 ~~~~~I~~~i~~ll~~l~~ 427 (430)
+++++|+++|+.|+++|++
T Consensus 134 ~~~~~I~~~v~~ll~~l~~ 152 (161)
T 2cwd_A 134 EVYWTLEAALQAFLDRHGS 152 (161)
T ss_dssp HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999965
No 5
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=100.00 E-value=2.9e-39 Score=287.56 Aligned_cols=149 Identities=34% Similarity=0.567 Sum_probs=132.8
Q ss_pred ceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHH
Q psy4895 249 KAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLA 328 (430)
Q Consensus 249 t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~ 328 (430)
++|||||+||+|||||||+|||++++++|+.++ |+|+||||.+||.|+++||.|+++|+
T Consensus 2 ~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~---------------------~~v~SAGt~~~~~g~~~~~~a~~~l~ 60 (156)
T 2gi4_A 2 KKILFICLGNICRSPMAEFIMKDLVKKANLEKE---------------------FFINSAGTSGEHDGEGMHYGTKNKLA 60 (156)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTT---------------------CEEEEEBSSCSSTTCCCCHHHHHHHH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCc---------------------EEEEeeecCCcccCCCCCHHHHHHHH
Confidence 589999999999999999999999998877544 67778888888899999999999999
Q ss_pred hCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCC-CCccCCCCCCCchHH
Q psy4895 329 KHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKG-VKIVEDPYYSRAKDA 406 (430)
Q Consensus 329 e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~-~~di~DP~~~~~~~~ 406 (430)
++|||++ |++++++++++.+||+|||||++|++.+.+.+|. ...|++++++|.+.. ..+|+||||++ +
T Consensus 61 ~~Gid~s~~~ar~l~~~d~~~~DlIi~Md~~~~~~l~~~~p~-------~~~kv~~l~~~~~~~~~~~I~DP~~~~---~ 130 (156)
T 2gi4_A 61 QLNIEHKNFTSKKLTQKLCDESDFLITMDNSNFKNVLKNFTN-------TQNKVLKITDFSPSLNYDEVPDPWYSG---N 130 (156)
T ss_dssp HTSCSCCCCCCCBCCHHHHTTCSEEECCCHHHHHHHHHHSCG-------GGGGEECTTTTCSSCCCCSSCHHHHTS---C
T ss_pred HcCCCccCCccccCCHHHhccCCEEEEECChHHHHHHHHCCC-------ccCeEEEehhhcCCCCCCCCCCCCCCC---H
Confidence 9999997 8999999999999999999999999999888874 236899998887642 35899999974 8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q psy4895 407 FDICYEHCYRSCEQFLNKVEKN 428 (430)
Q Consensus 407 f~~~~~~I~~~i~~ll~~l~~~ 428 (430)
|++++++|+++|+.|+++|.+.
T Consensus 131 f~~v~~~I~~~~~~ll~~l~~~ 152 (156)
T 2gi4_A 131 FDETYKILSLACKNLLVFLSKH 152 (156)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999763
No 6
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=100.00 E-value=1.9e-38 Score=284.54 Aligned_cols=148 Identities=36% Similarity=0.601 Sum_probs=132.9
Q ss_pred ceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHH
Q psy4895 249 KAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLA 328 (430)
Q Consensus 249 t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~ 328 (430)
.+||||||||+|||||||+|||+++.++|+.+ +|+|+||||.+||.|+++||.|+++|+
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~---------------------~~~v~SAGt~~~~~G~~~~p~a~~~l~ 63 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGD---------------------AVRVTSAGTGNWHVGSCADERAAGVLR 63 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTT---------------------TEEEEEEESSCTTTTCCCCHHHHHHHH
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCC---------------------cEEEEecccCCCcCCCCCCHHHHHHHH
Confidence 68999999999999999999999998877654 477888888999999999999999999
Q ss_pred hCCCCCCCcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCC-C--ccCCCCCCCchH
Q psy4895 329 KHNVPCQHQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGV-K--IVEDPYYSRAKD 405 (430)
Q Consensus 329 e~Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~-~--di~DP~~~~~~~ 405 (430)
++|||++|++|+++++++.+ |||||||++|++.+.+.+|. . .|+++|.+|++... . +|+||||++ .+
T Consensus 64 ~~Gid~s~~ar~l~~~~~~~-DlIi~Md~~~~~~l~~~~p~-------~-~kv~~l~~~~~~~~~~~w~I~DP~~~~-~~ 133 (163)
T 1u2p_A 64 AHGYPTDHRAAQVGTEHLAA-DLLVALDRNHARLLRQLGVE-------A-ARVRMLRSFDPRSGTHALDVEDPYYGD-HS 133 (163)
T ss_dssp HTTCCCCCCCCBCCHHHHTS-SEEEESSHHHHHHHHHTTCC-------G-GGEEEGGGGSTTCCSSCCCCCCCTTSC-HH
T ss_pred HcCcCCCceeeECChhhccC-CEEEEeCHHHHHHHHHHCCC-------c-ceEEehhhhcccccCCCCCCCCCCCCC-HH
Confidence 99999999999999999999 99999999999998887762 3 68999999977542 2 799999985 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q psy4895 406 AFDICYEHCYRSCEQFLNKVEK 427 (430)
Q Consensus 406 ~f~~~~~~I~~~i~~ll~~l~~ 427 (430)
+|++++++|+++|+.|+++|++
T Consensus 134 ~f~~~~~~I~~~~~~ll~~l~~ 155 (163)
T 1u2p_A 134 DFEEVFAVIESALPGLHDWVDE 155 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999865
No 7
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=100.00 E-value=3e-38 Score=282.71 Aligned_cols=151 Identities=35% Similarity=0.651 Sum_probs=132.4
Q ss_pred ccceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHH
Q psy4895 247 GKKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDV 326 (430)
Q Consensus 247 s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~ 326 (430)
+..+||||||||+|||||||+|||++++++|+.++ .++|+||||.+||.|+++||.|+++
T Consensus 6 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~--------------------~~~v~SAGt~~~~~g~~~~p~a~~~ 65 (161)
T 1d1q_A 6 PKISVAFIALGNFCRSPMAEAIFKHEVEKANLENR--------------------FNKIDSFGTSNYHVGESPDHRTVSI 65 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGG--------------------EEEEEEEESSCTTBTCCCCHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCC--------------------eEEEEeccccCCcCCCCCCHHHHHH
Confidence 34689999999999999999999999998776432 1678888888888999999999999
Q ss_pred HHhCCCCCCCcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCC---CCccCCCCCCCc
Q psy4895 327 LAKHNVPCQHQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKG---VKIVEDPYYSRA 403 (430)
Q Consensus 327 L~e~Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~---~~di~DP~~~~~ 403 (430)
|+++|||++|++++++++++.+||+|||||++|++.+.+.+|. .+..|+..+.+|++.. ..+|+||||++
T Consensus 66 l~~~Gid~s~~ar~l~~~~~~~~DlIl~M~~~~~~~l~~~~p~------~~~~kv~~l~~~~~~~~~~~~~i~DP~~~~- 138 (161)
T 1d1q_A 66 CKQHGVKINHKGKQIKTKHFDEYDYIIGMDESNINNLKKIQPE------GSKAKVCLFGDWNTNDGTVQTIIEDPWYGD- 138 (161)
T ss_dssp HHHTTCCCCCCBCBCCGGGGGTCSEEEESSHHHHHHHHHHCCT------TCSCEEEEGGGGCCCSSSSCSSCCCCTTSC-
T ss_pred HHHcCcCCCceEeECCHHHHhhCCEEEEeCHHHHHHHHHHCCc------cchhhEEeHhhhcccccCCCCcCCCCCCCC-
Confidence 9999999999999999999999999999999999988888773 2457898888887541 24899999985
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q psy4895 404 KDAFDICYEHCYRSCEQFLNK 424 (430)
Q Consensus 404 ~~~f~~~~~~I~~~i~~ll~~ 424 (430)
.++|++++++|+++|+.|+++
T Consensus 139 ~~~f~~~~~~I~~~~~~ll~~ 159 (161)
T 1d1q_A 139 IQDFEYNFKQITYFSKQFLKK 159 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 899999999999999999975
No 8
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-38 Score=283.20 Aligned_cols=148 Identities=34% Similarity=0.686 Sum_probs=131.4
Q ss_pred ccceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHH
Q psy4895 247 GKKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDV 326 (430)
Q Consensus 247 s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~ 326 (430)
++++|||||+||+|||||||+||++++.++|+. +++|+||||.+||+|+++||.|+++
T Consensus 5 ~m~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~----------------------~~~v~SAGt~~~~~G~~~~~~a~~~ 62 (158)
T 3rof_A 5 GMVDVAFVCLGNICRSPMAEAIMRQRLKDRNIH----------------------DIKVHSRGTGSWNLGEPPHEGTQKI 62 (158)
T ss_dssp SCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCC----------------------SEEEEEEETTCCSTTCCCCHHHHHH
T ss_pred CCCEEEEEeCCchhHHHHHHHHHHHHHHHcCCC----------------------CeEEEecccCCcccCCCCCHHHHHH
Confidence 468999999999999999999999999887763 2788888999999999999999999
Q ss_pred HHhCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchH
Q psy4895 327 LAKHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKD 405 (430)
Q Consensus 327 L~e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~ 405 (430)
|+++|||++ |+++++++++ +||+|||||++|++.+..++|. ...|++++++|++....+|+||||++
T Consensus 63 l~~~Gid~~~~~ar~l~~~~--~~DlIi~Md~~~~~~l~~~~p~-------~~~kv~~l~~~~~~~~~~VpDPyy~~--- 130 (158)
T 3rof_A 63 LNKHNIPFDGMISELFEATD--DFDYIVAMDQSNVDNIKSINPN-------LKGQLFKLLEFSNMEESDVPDPYYTN--- 130 (158)
T ss_dssp HHHTTCCCTTCCCCBCCTTC--CCSEEEESSHHHHHHHHHHCTT-------CCSEEEEGGGGCCSSCSSCCCHHHHC---
T ss_pred HHHcCCCcCCCcceECChhh--cCCEEEEcCHHHHHHHHHhcCC-------CcCEEEEehhhccCCCCcCCCCCCCc---
Confidence 999999998 9999999988 9999999999999999887763 22499999999874325899999975
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q psy4895 406 AFDICYEHCYRSCEQFLNKVEKN 428 (430)
Q Consensus 406 ~f~~~~~~I~~~i~~ll~~l~~~ 428 (430)
+|++++++|+++|+.|+++|+++
T Consensus 131 ~F~~v~~~Ie~~~~~ll~~l~~~ 153 (158)
T 3rof_A 131 NFEGVYDMVLSSCDNLIDYIVKD 153 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Confidence 69999999999999999999764
No 9
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=100.00 E-value=4.5e-38 Score=286.45 Aligned_cols=149 Identities=23% Similarity=0.312 Sum_probs=132.3
Q ss_pred ccceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHH
Q psy4895 247 GKKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDV 326 (430)
Q Consensus 247 s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~ 326 (430)
..++|||||+||+|||||||+|||++++++|+ .|+|+||||.+|+ |+++||.|+++
T Consensus 33 ~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-----------------------~~~v~SAGt~~~~-G~~~dp~a~~v 88 (184)
T 4etn_A 33 GSMDIIFVCTGNTSRSPMAEALFKSIAEREGL-----------------------NVNVRSAGVFASP-NGKATPHAVEA 88 (184)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-----------------------CEEEEEEETTCCT-TCBCCHHHHHH
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHhcCC-----------------------cEEEEeeecCCcC-CCCCCHHHHHH
Confidence 34789999999999999999999999987653 3788888888876 99999999999
Q ss_pred HHhCCCCCCCcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchHH
Q psy4895 327 LAKHNVPCQHQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKDA 406 (430)
Q Consensus 327 L~e~Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~~ 406 (430)
|+++|||++|++++++++++.+||||||||++|++.+.+.+|. ...|++++++|++....+|+||||++ .++
T Consensus 89 l~e~Gidishrar~lt~~d~~~~DlIltMd~~~~~~l~~~~P~-------~~~Kv~lL~~~~~~~~~dVpDPy~g~-~~~ 160 (184)
T 4etn_A 89 LFEKHIALNHVSSPLTEELMESADLVLAMTHQHKQIIASQFGR-------YRDKVFTLKEYVTGSHGDVLDPFGGS-IDI 160 (184)
T ss_dssp HHHTTCCCCCBCCBCCHHHHHHCSEEEESSHHHHHHHHHHCGG-------GGGGEEEHHHHHHSSCCCCCCCTTCC-HHH
T ss_pred HHHcCCCchhccCcCCHHHcCCCCEEEEcCcHHHHHHHHHCCC-------ccceEEEhhhhccCCCCccCCCCCCC-HHH
Confidence 9999999999999999999999999999999999999888874 23689999888643335899999985 899
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy4895 407 FDICYEHCYRSCEQFLNKVEK 427 (430)
Q Consensus 407 f~~~~~~I~~~i~~ll~~l~~ 427 (430)
|++++++|+++|+.|+++|++
T Consensus 161 F~~v~d~I~~~i~~ll~~l~~ 181 (184)
T 4etn_A 161 YKQTRDELEELLRQLAKQLKK 181 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999975
No 10
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=100.00 E-value=2.6e-37 Score=306.79 Aligned_cols=232 Identities=23% Similarity=0.364 Sum_probs=179.1
Q ss_pred CCceeeccCCcChHHHHHHHHHHhhccccc-----------CCCCccccccccccCCCceEEeCCCCCHHHHHHHHHHHh
Q psy4895 17 PPTVYYIPDFITREEESHLLNKIYSHNLLM-----------TGNNVNVEKYVIKKAPPTVYYIPDFITREEESHLLNKIY 85 (430)
Q Consensus 17 p~~~~yip~fi~~~ee~~ll~~i~~~~~~~-----------~~~~~~l~~~~~~~lp~Gl~~ipdfls~~ee~~Ll~~l~ 85 (430)
+..-|-+..|-|++|++..++.+++..... +.....++..++..+|+|++|+|||||++||+.|++.|.
T Consensus 54 ~~kgfaFV~f~~~~~A~~Ai~~lnG~~~~~~~g~~~~ly~~~~~~~~~~~~~~~~lp~Gl~~~p~fis~~Ee~~Ll~~i~ 133 (345)
T 3tht_A 54 PNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFVEKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVD 133 (345)
T ss_dssp TTCSEEEEEESSHHHHHHHHHHTTTCEEECTTSCEEECEEEECSSEEEEEEECCSCCTTEEEETTCSCHHHHHHHHTTCC
T ss_pred CCCCEEEEEECCHHHHHHHHHHhCCCccccccCCceEEEEEEeecccccccccccCCCceEEEcCcCCHHHHHHHHHhcc
Confidence 456799999999999999999999987631 122234566677889999999999999999999999887
Q ss_pred cCCC----CcccccccceEEEecCcCCCCCC-------CCCCChhHHHHHHHHHHhcCCCCCCCCceEEEeeecCCCCCC
Q psy4895 86 SVPK----PKWTQLSNRKLQNWGGIPHPKGM-------IAEKLPEWLDTYLERINQLGVFESVKPNHVLINEYLAGQGIM 154 (430)
Q Consensus 86 ~~~~----~~w~~~~~rr~~~~G~~~~~~~~-------~~~~~P~~l~~l~~rl~~~~~~~~~~pn~~lvN~Y~~G~~I~ 154 (430)
..+. ..|..+++||+++||+.|+|++. .+.+||+||..+++++.+.+.+ +..||+|+||+|.+|++|+
T Consensus 134 w~~~~~~~~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~l~~r~~~~~~~-~~~~n~~lvN~Y~~G~~I~ 212 (345)
T 3tht_A 134 WTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYI-KHKPDQMTINQYEPGQGIP 212 (345)
T ss_dssp ----------------CEEECCC------------------CCCHHHHHHHHHHHHHTSC-SSCCSEEEEEEECTTCCEE
T ss_pred cCCccccccCcccccCceEEEECCcccccccccccCCCCCcCcCHHHHHHHHHHHhcccC-CCCCCEEEEEEecCCCCEe
Confidence 5432 23677889999999988876542 2467999999999999765544 6899999999999999999
Q ss_pred CCCCC-CCCCCceEEEcCCCceEEEEecCCCCCCCCeeEEEEeCCCeEEEecchhhccccccccCCCCCCCccccccccC
Q psy4895 155 PHFDG-PLYYPTISTISCGSHTILNFYEPDRTSEGSEVCSIFVDARSLLILQDDMYEKYVHGISSKTDDTLSSDILNCCS 233 (430)
Q Consensus 155 ~H~D~-~~~~~~Ia~lSLgs~~~m~f~~~~~~~~~~~~~~l~L~~gSlliMsG~aR~~w~H~I~~~~~d~~~~~~~~~~~ 233 (430)
||+|+ ..|+++|++||||++++|.|++.. ....++.|++||||||+|++|+.|+|+|++++.|++++.+.|..+
T Consensus 213 ~H~D~~~~~~~~I~slSLG~~~~f~f~~~~-----~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~ 287 (345)
T 3tht_A 213 AHIDTHSAFEDEIVSLSLGSEIVMDFKHPD-----GIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSG 287 (345)
T ss_dssp EECCCTTTBCSCEEEEEESSCEEEEEECTT-----SCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCE
T ss_pred eccCCchhcCCeEEEEECCCceeEEEccCC-----CceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccc
Confidence 99999 689999999999999999999875 358899999999999999999999999999999998776544211
Q ss_pred ---CCCC--cccccccccccceEEEe
Q psy4895 234 ---SSPN--QMLNRSTRAGKKAVLFV 254 (430)
Q Consensus 234 ---~~~~--~~l~r~~R~s~t~~lf~ 254 (430)
...| ..++|++|+|+|++-+.
T Consensus 288 ~~~~~~~~~~~~~r~~RiSlT~R~v~ 313 (345)
T 3tht_A 288 IITSDVGDLTLSKRGLRTSFTFRKVR 313 (345)
T ss_dssp ECCSSSSCEEEEECCCEEEEEEECBC
T ss_pred cccccCCCceeccCCCEEEEEEEecC
Confidence 1223 36889999999998654
No 11
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=100.00 E-value=4.1e-37 Score=272.09 Aligned_cols=142 Identities=27% Similarity=0.503 Sum_probs=125.0
Q ss_pred cceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHH
Q psy4895 248 KKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVL 327 (430)
Q Consensus 248 ~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L 327 (430)
+++||||||||+|||||||+|||++++ +++|+||||.+ |.|+++||.|+++|
T Consensus 8 m~~VLFVC~gN~cRSpmAEal~r~~~~---------------------------~~~v~SAGt~~-~~g~~~~p~a~~~l 59 (150)
T 2wmy_A 8 FDSILVICTGNICRSPIGERLLRRLLP---------------------------SKKINSAGVGA-LVDHTADESAIRVA 59 (150)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHCT---------------------------TSEEEEEETTC-CTTCCCCHHHHHHH
T ss_pred cCEEEEEcCCchHHHHHHHHHHHHhcC---------------------------CCEEEeccccC-CCCCCCCHHHHHHH
Confidence 358999999999999999999999863 26788888877 67999999999999
Q ss_pred HhCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchHH
Q psy4895 328 AKHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKDA 406 (430)
Q Consensus 328 ~e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~~ 406 (430)
+++|||++ |++++++++++.+||+|||||++|++.+...+|. ...|+..+.+|++. .+|+||||++ .++
T Consensus 60 ~e~Gid~~~~~ar~l~~~~~~~~DlIi~m~~~~~~~l~~~~p~-------~~~kv~~l~~~~~~--~~i~DP~~~~-~~~ 129 (150)
T 2wmy_A 60 EKNGLCLKGHRGTKFTSALARQYDLLLVMEYSHLEQISRIAPE-------ARGKTMLFGHWLDS--KEIPDPYRMS-DEA 129 (150)
T ss_dssp HHTTCCCTTCCCCBCCHHHHTTCSEEEESCHHHHHHHHHHCGG-------GGGGEEETTTTSSS--CCCCCCTTCC-HHH
T ss_pred HHcCCCccCCcccCCCHHHhccCCEEEEcCHHHHHHHHHhCCC-------ccceEeehHHhCCC--CCCCCCCCCC-HHH
Confidence 99999997 8999999999999999999999998888777663 23588888899654 4799999985 899
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy4895 407 FDICYEHCYRSCEQFLNKVEK 427 (430)
Q Consensus 407 f~~~~~~I~~~i~~ll~~l~~ 427 (430)
|++++++|+++|+.|+++|++
T Consensus 130 f~~~~~~i~~~i~~ll~~l~~ 150 (150)
T 2wmy_A 130 FDSVYQLLEQASKRWAEKLGE 150 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999853
No 12
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=100.00 E-value=2.5e-37 Score=272.40 Aligned_cols=139 Identities=36% Similarity=0.687 Sum_probs=122.6
Q ss_pred ceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHH
Q psy4895 249 KAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLA 328 (430)
Q Consensus 249 t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~ 328 (430)
.+||||||||+|||||||+|||++.+ + .++|+||||.+||.|+++||.|+++|+
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~-----~---------------------~~~v~SAGt~~~~~g~~~~p~a~~~l~ 58 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVG-----D---------------------KLIIDSAATSGFHVGQSPDTRSQKVCK 58 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHS-----S---------------------CSSCEEECSCTTSCSCSCTHHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcC-----C---------------------CEEEEeeecCCcccCCCCCHHHHHHHH
Confidence 57999999999999999999999985 2 256778888888899999999999999
Q ss_pred hCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchHHH
Q psy4895 329 KHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKDAF 407 (430)
Q Consensus 329 e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~~f 407 (430)
++|||++ |++++++++++.+||+|||||++|++.+.+.+|. ....|+.+|++ | .+|+||||++ ++|
T Consensus 59 e~Gid~s~~~sr~l~~~~~~~~DlIi~m~~~~~~~l~~~~p~------~~~~kv~~l~~--~---~~i~DP~~~~--~~f 125 (146)
T 1p8a_A 59 SNGVDISKQRARQITKADFSKFDVIAALDQSILSDINSMKPS------NCRAKVVLFNP--P---NGVDDPYYSS--DGF 125 (146)
T ss_dssp HHSCCCCCCCCCCCCSHHHHSCSEEEESSHHHHHHHHHHCCS------SCSCEEEECSC--T---TSSCCCSSSS--SSH
T ss_pred HcCCChhcCeeccCCHhHhhcCCEEEEeChHHHHHHHHHCCc------ccCCeEEEeCC--C---CCCCCCCCCC--HHH
Confidence 9999997 8999999999999999999999999988887762 12468888875 1 2699999974 799
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy4895 408 DICYEHCYRSCEQFLNKVE 426 (430)
Q Consensus 408 ~~~~~~I~~~i~~ll~~l~ 426 (430)
++++++|+++|+.|+++|+
T Consensus 126 ~~~~~~I~~~v~~ll~~l~ 144 (146)
T 1p8a_A 126 PTMFASISKEMKPFLTEHG 144 (146)
T ss_dssp HHHHHHHHHTTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999985
No 13
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=100.00 E-value=7.2e-37 Score=274.60 Aligned_cols=145 Identities=29% Similarity=0.519 Sum_probs=127.8
Q ss_pred cceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHH
Q psy4895 248 KKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVL 327 (430)
Q Consensus 248 ~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L 327 (430)
+++||||||||+|||||||+|||++++ +++|+||||.+ +.|+++||.|+++|
T Consensus 22 m~~VLFVCtgN~cRSpmAEal~r~~~~---------------------------~~~v~SAGt~~-~~g~~~~p~a~~vl 73 (167)
T 2fek_A 22 FNNILVVCVGNICRSPTAERLLQRYHP---------------------------ELKVESAGLGA-LVGKGADPTAISVA 73 (167)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHCT---------------------------TCEEEEEETTC-CTTCCCCHHHHHHH
T ss_pred cCeEEEEcCCcHHHHHHHHHHHHHhcC---------------------------CeEEEeeecCC-CCCCCCCHHHHHHH
Confidence 468999999999999999999999863 26788888877 67999999999999
Q ss_pred HhCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchHH
Q psy4895 328 AKHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKDA 406 (430)
Q Consensus 328 ~e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~~ 406 (430)
+++|||++ |++|+++++++.+||+|||||+.|++.+...+|. ...|+..+.+|++. .+|+||||++ .++
T Consensus 74 ~e~Gid~s~~~sr~l~~~~~~~~DlIitM~~~~~~~l~~~~p~-------~~~kv~~l~~w~~~--~~I~DP~~~~-~~~ 143 (167)
T 2fek_A 74 AEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPE-------MRGKVMLFGHWDNE--CEIPDPYRKS-RET 143 (167)
T ss_dssp HHTTCCCTTCCCCBCCHHHHHHSSEEEESCHHHHHHHHHHCGG-------GGGGEEEGGGGTTT--CCCCCCTTSC-HHH
T ss_pred HHcCCCccCCcCccCCHHHhccCCEEEEcCHHHHHHHHHhCCc-------ccceEEehHHhCCC--CCCCCCCCCC-HHH
Confidence 99999997 8999999999999999999999998888777663 23588888899654 4799999985 899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccC
Q psy4895 407 FDICYEHCYRSCEQFLNKVEKNEV 430 (430)
Q Consensus 407 f~~~~~~I~~~i~~ll~~l~~~~~ 430 (430)
|++++++|+++|+.|+++|++..|
T Consensus 144 f~~v~~~I~~~v~~ll~~l~~~~~ 167 (167)
T 2fek_A 144 FAAVYTLLERSARQWAQALNAEQV 167 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999987654
No 14
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=1.7e-36 Score=275.64 Aligned_cols=145 Identities=30% Similarity=0.415 Sum_probs=127.1
Q ss_pred cceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHH
Q psy4895 248 KKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVL 327 (430)
Q Consensus 248 ~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L 327 (430)
..+||||||||+|||||||+|||++.++.| .+|+|+||||.+++ |.++++.++++|
T Consensus 34 ~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g-----------------------~~~~v~SAGt~~~~-g~~~~~~a~~~l 89 (180)
T 4egs_A 34 SMRVLFVCTGNTCRSPMAEGIFNAKSKALG-----------------------KDWEAKSAGVFAPE-GFPASSEAVEVL 89 (180)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHHHTT-----------------------CCCEEEEEETTCCT-TCCCCHHHHHHH
T ss_pred CeEEEEEeCCCcccCHHHHHHHHHHHHhcC-----------------------CceEEEEeeecCcC-CCCCChHHHHHH
Confidence 457999999999999999999999876433 24788888888875 779999999999
Q ss_pred -HhCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchH
Q psy4895 328 -AKHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKD 405 (430)
Q Consensus 328 -~e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~ 405 (430)
+++|||++ |++|+|+++|+.+||||||||++|++.+...+|. ...|++++.+|.+.. .+|+||||++ .+
T Consensus 90 ~~e~Gidis~h~sr~l~~~d~~~~DlIi~Md~~~~~~l~~~~p~-------~~~kv~~l~~~~~~~-~dI~DPy~~~-~e 160 (180)
T 4egs_A 90 KKEYGIDISDHRAKSLREEDLKGADLVLAMAFSHKRSLVSQYPE-------YADKIFTIKEFVGLE-GDVEDPYGMP-LE 160 (180)
T ss_dssp HHHHCCCCTTCCCCBCCSHHHHHCSEEEESSHHHHHHHHHHSTT-------SGGGEEETTTTTTCC-SCCCCCTTCC-HH
T ss_pred HHHcCcCcccCcccccChhhCcCCCEEEEcCHHHHHHHHHhCcc-------cccceeehhhccccC-CCCCCCCCCC-HH
Confidence 57999997 9999999999999999999999999999888773 346899999987643 5899999985 89
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy4895 406 AFDICYEHCYRSCEQFLNKV 425 (430)
Q Consensus 406 ~f~~~~~~I~~~i~~ll~~l 425 (430)
+|+.++++|+++|+.|+++|
T Consensus 161 ~f~~v~~~I~~~i~~ll~kL 180 (180)
T 4egs_A 161 VYKKTAEELSGLIDKLIEKL 180 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999986
No 15
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=100.00 E-value=5.4e-37 Score=275.67 Aligned_cols=150 Identities=26% Similarity=0.494 Sum_probs=123.6
Q ss_pred cccccccc---cceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCC
Q psy4895 240 LNRSTRAG---KKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVG 316 (430)
Q Consensus 240 l~r~~R~s---~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g 316 (430)
+.|+.|.. +++||||||||+|||||||+|||++++ +++|+||||.+ +.|
T Consensus 15 ~~~~~~~~~~mm~~VLFVCtgNicRSpmAEal~r~~~~---------------------------~~~v~SAGt~~-~~g 66 (168)
T 2wja_A 15 VPRGSHMAKLMFDSILVICTGNICRSPIGERLLRRLLP---------------------------SKKINSAGVGA-LVD 66 (168)
T ss_dssp -CCCSHHHHHHCSEEEEEESSSSSHHHHHHHHHHHHST---------------------------TSEEEEEETTC-CTT
T ss_pred CcchHhHHhhccCEEEEEcCCcHHHHHHHHHHHHHhcC---------------------------CeEEEeeecCC-CCC
Confidence 35555554 458999999999999999999999873 26778888876 679
Q ss_pred CCCCHHHHHHHHhCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCcc
Q psy4895 317 HPADSRARDVLAKHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIV 395 (430)
Q Consensus 317 ~~~~~~a~~~L~e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di 395 (430)
+++||.|+++|+++|||++ |++++++++++.+||+|||||+.|++++...+|. ...|+..+.+|++. .+|
T Consensus 67 ~~~~p~a~~vl~e~Gid~s~~~sr~l~~~~~~~~DlIitM~~~~~~~l~~~~p~-------~~~kv~~l~~w~~~--~~I 137 (168)
T 2wja_A 67 HAADESAIRVAEKNGLCLKGHRGTKFTSALARQYDLLLVMEYSHLEQISRIAPE-------ARGKTMLFGHWLDS--KEI 137 (168)
T ss_dssp CCCCHHHHHC---CCCCCTTCCCCBCCHHHHTTCSEEEESSHHHHHHHHHHCTT-------TGGGEEETTCC-----CCC
T ss_pred CCCCHHHHHHHHHcCCCcccCccCCCChhHhccCCEEEEcCHHHHHHHHHhCCc-------ccceEEeeHhhCCC--CCC
Confidence 9999999999999999997 8999999999999999999999998888766663 23688888898653 479
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHhh
Q psy4895 396 EDPYYSRAKDAFDICYEHCYRSCEQFLNKVEK 427 (430)
Q Consensus 396 ~DP~~~~~~~~f~~~~~~I~~~i~~ll~~l~~ 427 (430)
+||||++ .++|++++++|+++|+.|+++|++
T Consensus 138 ~DP~~~~-~~~f~~v~~~I~~~v~~ll~~l~~ 168 (168)
T 2wja_A 138 PDPYRMS-DEAFDSVYQLLEQASKRWAEKLGE 168 (168)
T ss_dssp CCCTTCC-HHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CCCCCCC-HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999985 899999999999999999998853
No 16
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.8e-35 Score=257.40 Aligned_cols=133 Identities=20% Similarity=0.288 Sum_probs=109.4
Q ss_pred cccccccccceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCC
Q psy4895 240 LNRSTRAGKKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPA 319 (430)
Q Consensus 240 l~r~~R~s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~ 319 (430)
++|+. .+++||||||||+|||||||+|||++++ + +++|+||||.| |+++
T Consensus 14 ~~~~~--~~~~VLFVC~gN~cRSpmAEal~~~~~~-----~---------------------~~~v~SAGt~~---g~~~ 62 (148)
T 3rh0_A 14 VPRGS--HMKSVLFVCVGNGGKSQMAAALAQKYAS-----D---------------------SVEIHSAGTKP---AQGL 62 (148)
T ss_dssp --------CCEEEEEESSSSSHHHHHHHHHHHHCC-----T---------------------TSEEEEEESSC---CSSC
T ss_pred ccCcC--CCCEEEEECCCchhHHHHHHHHHHHhcC-----C---------------------CEEEEecccCC---CCCC
Confidence 45653 3679999999999999999999999874 2 46788888887 8899
Q ss_pred CHHHHHHHHhCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCC
Q psy4895 320 DSRARDVLAKHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDP 398 (430)
Q Consensus 320 ~~~a~~~L~e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP 398 (430)
||.|+++|+++|||++ |++++++++++.+||+|||||+++.+. +|. .+ .++ +..| +|+||
T Consensus 63 dp~a~~vl~e~Gidis~h~ar~l~~~~~~~~DlIitM~~~~~~~----~p~------~~-~k~--~~~w------~VpDP 123 (148)
T 3rh0_A 63 NQLSVESIAEVGADMSQGIPKAIDPELLRTVDRVVILGDDAQVD----MPE------SA-QGA--LERW------SIEEP 123 (148)
T ss_dssp CHHHHHHHHHTTCCCTTCCCCBCCHHHHHHCSEEEEESSSCCCC----CCT------TC-CSE--EEEE------CCCCC
T ss_pred CHHHHHHHHHcCCCcCCCeeeECCHHHhcCCCEEEEecChHHhh----Ccc------CC-CCE--eecC------CcCCC
Confidence 9999999999999997 999999999999999999999988664 332 22 343 3445 59999
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHH
Q psy4895 399 YYSRAKDAFDICYEHCYRSCEQFLN 423 (430)
Q Consensus 399 ~~~~~~~~f~~~~~~I~~~i~~ll~ 423 (430)
||++ .++|++++++|+++|+.|++
T Consensus 124 y~~~-~~~F~~v~d~I~~~v~~Ll~ 147 (148)
T 3rh0_A 124 DAQG-MERMRIVRDQIDNRVQALLA 147 (148)
T ss_dssp SCCH-HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCC-HHHHHHHHHHHHHHHHHHHh
Confidence 9984 88999999999999999985
No 17
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=100.00 E-value=4.5e-34 Score=247.86 Aligned_cols=128 Identities=20% Similarity=0.293 Sum_probs=107.7
Q ss_pred cceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHH
Q psy4895 248 KKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVL 327 (430)
Q Consensus 248 ~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L 327 (430)
+++||||||||+|||||||+|||++.+ + +++|+||||. |+++||.|+++|
T Consensus 4 m~~VLFVC~gN~cRSpmAEa~~~~~~~-----~---------------------~~~v~SAGt~----g~~~~~~a~~~l 53 (134)
T 2l17_A 4 MKKVMFVCKRNSCRSQMAEGFAKTLGA-----G---------------------KIAVTSCGLE----SSRVHPTAIAMM 53 (134)
T ss_dssp CEEEEEECCSSTHHHHHHHHHHHHHSB-----T---------------------TEEEEEECCT----TSSCCHHHHHHH
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHHcC-----C---------------------CEEEEcccCC----CCCCCHHHHHHH
Confidence 468999999999999999999999974 2 3677788877 579999999999
Q ss_pred HhCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHH--HhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCch
Q psy4895 328 AKHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEK--RAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAK 404 (430)
Q Consensus 328 ~e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P--~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~ 404 (430)
+++|||++ |++++++++++.+||+|||||+.+ + .+| .. .+|++ .+| +|+||||++ .
T Consensus 54 ~e~Gid~s~~~sr~l~~~~~~~~DlIi~md~~~-~----~~p~~~~-------~~~~~--~~~------~i~DP~~~~-~ 112 (134)
T 2l17_A 54 EEVGIDISGQTSDPIENFNADDYDVVISLCGCG-V----NLPPEWV-------TQEIF--EDW------QLEDPDGQS-L 112 (134)
T ss_dssp HTTTCCCSSCCCCCGGGCCGGGCSEEEECSCSC-S----CCCTHHH-------HSSEE--EEC------CCCCCTTCC-H
T ss_pred HHcCCCcccCccccCChHHhccCCEEEEeCchh-h----hCccccc-------CCCee--ccC------CCCCCCCCC-H
Confidence 99999997 899999999999999999997665 2 344 21 13432 344 599999985 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q psy4895 405 DAFDICYEHCYRSCEQFLNKVE 426 (430)
Q Consensus 405 ~~f~~~~~~I~~~i~~ll~~l~ 426 (430)
++|++++++|+++|+.|+++|+
T Consensus 113 ~~f~~~~~~i~~~v~~ll~~l~ 134 (134)
T 2l17_A 113 EVFRTVRGQVKERVENLIAKIS 134 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999874
No 18
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=100.00 E-value=1e-33 Score=244.72 Aligned_cols=126 Identities=19% Similarity=0.262 Sum_probs=105.4
Q ss_pred ceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHH
Q psy4895 249 KAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLA 328 (430)
Q Consensus 249 t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~ 328 (430)
++|||||+||+|||||||+|||++++ .++.|+||||.+ .++||.|+++|+
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~--------------------------~~~~v~SAGt~~----~~~~p~a~~~l~ 53 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILG--------------------------EGWNVYSAGIET----HGVNPKAIEAMK 53 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHST--------------------------TTEEEEEEESSC----CCCCHHHHHHHH
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcC--------------------------CCEEEEcCcCCC----CCCCHHHHHHHH
Confidence 57999999999999999999999863 247888888887 289999999999
Q ss_pred hCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchHHH
Q psy4895 329 KHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKDAF 407 (430)
Q Consensus 329 e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~~f 407 (430)
++|||++ |++++++++++.+||+|||||+.+ .+.+|. .+ .++..+ .| +|+||||+ ..++|
T Consensus 54 ~~Gid~s~~~ar~l~~~~~~~~D~Ii~m~~~~----~~~~p~------~~-~~~~~~-~~------~i~DP~g~-~~~~f 114 (131)
T 1jf8_A 54 EVDIDISNHTSDLIDNDILKQSDLVVTLCSDA----DNNCPI------LP-PNVKKE-HW------GFDDPAGK-EWSEF 114 (131)
T ss_dssp HTTCCCTTCCCCBCCHHHHHHCSEEEECSHHH----HHHSCC------CC-TTSEEE-EC------CCCCCTTS-CHHHH
T ss_pred HcCCCcccCccccCChHHhccCCEEEEcCcHH----HhhCcC------CC-CCcEEE-Ee------cCCCcCCC-CHHHH
Confidence 9999997 899999999999999999998643 234542 22 344333 44 59999986 48999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy4895 408 DICYEHCYRSCEQFLN 423 (430)
Q Consensus 408 ~~~~~~I~~~i~~ll~ 423 (430)
++++++|+++|+.|++
T Consensus 115 ~~~~~~i~~~~~~l~~ 130 (131)
T 1jf8_A 115 QRVRDEIKLAIEKFKL 130 (131)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999986
No 19
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=100.00 E-value=3e-33 Score=244.25 Aligned_cols=129 Identities=20% Similarity=0.288 Sum_probs=105.3
Q ss_pred ceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHH
Q psy4895 249 KAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLA 328 (430)
Q Consensus 249 t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~ 328 (430)
++||||||||+|||||||+|||++++ +++.|+||||.+ .++||.|+++|+
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~--------------------------~~~~v~SAGt~~----~~~~p~a~~~l~ 53 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLG--------------------------DEWKVYSAGIEA----HGLNPNAVKAMK 53 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSC--------------------------TTEEEEEEESSC----CCCCHHHHHHHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCC--------------------------CCEEEEcCcCCC----CCCCHHHHHHHH
Confidence 57999999999999999999999863 247888888887 379999999999
Q ss_pred hCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCC--CCc--
Q psy4895 329 KHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYY--SRA-- 403 (430)
Q Consensus 329 e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~--~~~-- 403 (430)
++|||++ |++++++++++.+||+|||||+ +.+ +.+|. .+ .++..+ .| +|+|||+ ++.
T Consensus 54 ~~Gid~s~~~sr~l~~~~~~~~D~Ii~m~~-~~~---~~~p~------~~-~~~~~~-~~------~i~DP~~~~g~~~e 115 (139)
T 1jl3_A 54 EVGIDISNQTSDIIDSDILNNADLVVTLCG-DAA---DKCPM------TP-PHVKRE-HW------GFDDPARAQGTEEE 115 (139)
T ss_dssp HTTCCCTTCCCCBCCHHHHTTCSEEEECSH-HHH---HHCCC------CC-TTSEEE-EC------CCCCGGGCCSCHHH
T ss_pred HcCCCcccCccCcCCHHHhhcCCEEEEeCc-hHH---hhCCC------CC-CCceEE-ec------cCCCCcccCCChHH
Confidence 9999997 8999999999999999999987 333 33542 22 232222 44 5999996 323
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHH
Q psy4895 404 -KDAFDICYEHCYRSCEQFLNKV 425 (430)
Q Consensus 404 -~~~f~~~~~~I~~~i~~ll~~l 425 (430)
.++|++++++|+++|+.|+++.
T Consensus 116 ~~~~f~~~~~~I~~~i~~ll~~~ 138 (139)
T 1jl3_A 116 KWAFFQRVRDEIGNRLKEFAETG 138 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Confidence 4799999999999999999864
No 20
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=99.98 E-value=1.2e-33 Score=241.95 Aligned_cols=122 Identities=22% Similarity=0.395 Sum_probs=102.3
Q ss_pred eEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHHh
Q psy4895 250 AVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLAK 329 (430)
Q Consensus 250 ~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~e 329 (430)
+||||||||+|||||||+|||++.+ +++|+||||.| |+++||.|+++|++
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~---------------------------~~~v~SAGt~~---g~~~~~~a~~~l~e 50 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAK---------------------------SWKAESAGVEK---AERVDETVKRLLAE 50 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCS---------------------------SCCEEEEESSC---CSSCCHHHHHHHHT
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcC---------------------------CEEEEecCCCC---CCCCCHHHHHHHHH
Confidence 5899999999999999999998763 25678888887 78999999999999
Q ss_pred CCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchHHHH
Q psy4895 330 HNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKDAFD 408 (430)
Q Consensus 330 ~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~~f~ 408 (430)
+||| + |++|++++.++.+||+|||||++ +.+|. .+ .++.. .+| +|+|||+++ .++|+
T Consensus 51 ~Gid-s~~~sr~l~~~~~~~~D~Ii~m~~~------~~~p~------~~-~~~~~-~~~------~i~DP~~~~-~~~f~ 108 (124)
T 1y1l_A 51 RGLK-AKEKPRTVDEVNLDDFDLIVTVCEE------SSCVV------LP-TDKPV-TRW------HIENPAGKD-EGTYR 108 (124)
T ss_dssp TTCC-CCSSCCBGGGSCGGGCSCEEEEECS------SCCBC------CS-CSSCE-EEE------ECCCCTTTC-TTHHH
T ss_pred cCcC-CCCccccCChhHhcCCCEEEEecCc------ccCcC------CC-CCeee-cce------ecCCCCCCC-HHHHH
Confidence 9999 8 89999999999999999999875 23542 22 23222 334 599999984 88999
Q ss_pred HHHHHHHHHHHHHHH
Q psy4895 409 ICYEHCYRSCEQFLN 423 (430)
Q Consensus 409 ~~~~~I~~~i~~ll~ 423 (430)
+++++|+++|+.|++
T Consensus 109 ~~~~~i~~~v~~ll~ 123 (124)
T 1y1l_A 109 RVLAEIEERVKKLVG 123 (124)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999975
No 21
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=99.97 E-value=1.5e-31 Score=248.16 Aligned_cols=129 Identities=19% Similarity=0.260 Sum_probs=105.8
Q ss_pred cceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHH
Q psy4895 248 KKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVL 327 (430)
Q Consensus 248 ~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L 327 (430)
.++|||||+||+|||||||+|||++.+ + ++.|+||||.| |+++||.++++|
T Consensus 81 ~~~VLFVCtgN~cRSpmAEal~~~~~~-----~---------------------~~~v~SAGt~~---g~~~dp~a~~vl 131 (213)
T 3t38_A 81 VPQVLFICVHNAGRSQIASALLSHYAG-----S---------------------SVEVRSAGSLP---ASEIHPLVLEIL 131 (213)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHG-----G---------------------GCEEEEEESSC---CSSCCHHHHHHH
T ss_pred CCEEEEECCCchhHHHHHHHHHHHhcc-----C---------------------ceEEEecccCC---CCCCCHHHHHHH
Confidence 579999999999999999999999985 2 36788888876 889999999999
Q ss_pred HhCCCCCC-CcccccchhhhccCCEEEEeCcccHHHHHHHHHHhhhcCCCCCCeEEEecccCCCCCCccCCCCCCCchHH
Q psy4895 328 AKHNVPCQ-HQARQVIEEDFGKFDYLFVMDESNFANVKAFEKRAVKQGIKPNAKILYLGDYDPKGVKIVEDPYYSRAKDA 406 (430)
Q Consensus 328 ~e~Gid~~-~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~~P~~~~~~~~~~~kv~~~~~~~p~~~~di~DP~~~~~~~~ 406 (430)
+++|||++ |++++++++++.+||+||+|++.+. ||. .+ +|.+ ..| +|+||||++ .++
T Consensus 132 ~e~Gidis~~~sr~l~~~~~~~~DlIitMd~~~~------~P~------~~-gk~~--~~w------~IpDPy~~~-~~~ 189 (213)
T 3t38_A 132 SERGVNISDAFPKPLTDDVIRASDYVITMGCGDV------CPM------YP-GKHY--LDW------ELADPSDEG-EDK 189 (213)
T ss_dssp HHTTCCCTTCCCCBCCHHHHHHCSEEEESSCCSC------SCC------CS-SSEE--EES------CC-----CC-CCC
T ss_pred HHcCCCcccCcCCcCCHHHhccCCEEEEecCccc------Ccc------cc-CCcc--CCC------CCCCCCCCC-HHH
Confidence 99999997 9999999999999999999977652 442 22 3332 345 599999985 789
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy4895 407 FDICYEHCYRSCEQFLNKVEK 427 (430)
Q Consensus 407 f~~~~~~I~~~i~~ll~~l~~ 427 (430)
|++++++|+++|+.|+++|..
T Consensus 190 F~~v~d~Ie~~v~~Ll~~L~~ 210 (213)
T 3t38_A 190 IQEIIEEIDGRIRELWKSIQL 210 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999975
No 22
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=99.97 E-value=6.7e-31 Score=249.20 Aligned_cols=176 Identities=20% Similarity=0.251 Sum_probs=142.2
Q ss_pred ccccccCCC---ceEEeCCCCCHHHHHHHHHHHhcCCCCccccc----------ccceEEEec-CcCCCCCC--CC-CCC
Q psy4895 55 KYVIKKAPP---TVYYIPDFITREEESHLLNKIYSVPKPKWTQL----------SNRKLQNWG-GIPHPKGM--IA-EKL 117 (430)
Q Consensus 55 ~~~~~~lp~---Gl~~ipdfls~~ee~~Ll~~l~~~~~~~w~~~----------~~rr~~~~G-~~~~~~~~--~~-~~~ 117 (430)
.+.+..+|+ |+.|+||||+++|++.|++.|.++. +|.+. ..|++++|| ..|+|++. .+ .+|
T Consensus 29 ~~~~~~~p~~i~gl~~~~~fl~~~e~~~Ll~~l~~~~--~w~~~~~~~~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~w 106 (238)
T 2iuw_A 29 VYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDV--PWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHW 106 (238)
T ss_dssp EEEEECCSSSCEEEEEETTSSCHHHHHHHHHHHHHHS--CCBCCEEESSSCEEECSSEEEEEECCCTTSCHHHHCCBSSC
T ss_pred ceeeecCCCCCCcEEEECCCCCHHHHHHHHHHHHHhC--CCccCceecCCcccccCCeeEEcCCCccccCCcccCCCCCC
Confidence 355666665 6999999999999999999996542 47633 246777788 45666653 22 479
Q ss_pred hhHHHHHHHHHHhcCCCCCCCCceEEEeeecCCC-CCCCCCCC-CCCC--CceEEEcCCCceEEEEecCCCCC-----CC
Q psy4895 118 PEWLDTYLERINQLGVFESVKPNHVLINEYLAGQ-GIMPHFDG-PLYY--PTISTISCGSHTILNFYEPDRTS-----EG 188 (430)
Q Consensus 118 P~~l~~l~~rl~~~~~~~~~~pn~~lvN~Y~~G~-~I~~H~D~-~~~~--~~Ia~lSLgs~~~m~f~~~~~~~-----~~ 188 (430)
|++|..+.+++++.. +..||+|+||+|.+|+ +|++|+|+ ..++ ++|++||||++|+|.|++..... ..
T Consensus 107 p~~l~~l~~~~~~~~---g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~~~~~~~~ 183 (238)
T 2iuw_A 107 HPVLRTLKNRIEENT---GHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGDYTY 183 (238)
T ss_dssp CHHHHHHHHHHHHHH---SCCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC--------C
T ss_pred CHHHHHHHHHHHHHh---CCCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCccccCcccC
Confidence 999999999987764 5689999999999997 99999999 5676 89999999999999999875311 11
Q ss_pred CeeEEEEeCCCeEEEecchhhccccccccCCCCCCCccccccccCCCCCcccccccccccceEEEe
Q psy4895 189 SEVCSIFVDARSLLILQDDMYEKYVHGISSKTDDTLSSDILNCCSSSPNQMLNRSTRAGKKAVLFV 254 (430)
Q Consensus 189 ~~~~~l~L~~gSlliMsG~aR~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~l~r~~R~s~t~~lf~ 254 (430)
...++|.|++||||||.|++|+.|+|+|++.+. .++.|||+||+.+.
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~-------------------~~~~RIsLTfR~v~ 230 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQHRVPKEYH-------------------SREPRVNLTFRTVY 230 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEEEEECCCSS-------------------CCCCEEEEEEECCC
T ss_pred CceEEEEcCCCCEEEEChhhhCccEecCCCcCC-------------------CCCCEEEEEeeecc
Confidence 478999999999999999999999999998642 57899999998543
No 23
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=99.96 E-value=3e-30 Score=239.13 Aligned_cols=167 Identities=17% Similarity=0.197 Sum_probs=135.7
Q ss_pred Cc-eEEeCCCCCHHHHHHHHHHHhcCCCCcc---cc---------ccc-ceEEEec---CcCCCCC--CCCCCChhHHHH
Q psy4895 63 PT-VYYIPDFITREEESHLLNKIYSVPKPKW---TQ---------LSN-RKLQNWG---GIPHPKG--MIAEKLPEWLDT 123 (430)
Q Consensus 63 ~G-l~~ipdfls~~ee~~Ll~~l~~~~~~~w---~~---------~~~-rr~~~~G---~~~~~~~--~~~~~~P~~l~~ 123 (430)
+| -+++|+||+++|++.|+++|.++. +| ++ ... |...+|| ..|.|++ ..+.+||++|..
T Consensus 9 ~~~~~~~~~~l~~~~a~~l~~~l~~~~--~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp~~L~~ 86 (204)
T 3s57_A 9 EGLDSSYTVLFGKAEADEIFQELEKEV--EYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLER 86 (204)
T ss_dssp TTEEEEEEECSCHHHHHHHHHHHHHHC--CCCCGGGGEEEETTEEEECSSEEEEEECTTCCEEETTEEECCEECCHHHHH
T ss_pred CCceEEecCcCCHHHHHHHHHHHHHhC--CCCCcccceEEECCeEeccCcEEEEECCCCCCcccCCCcccCCCCCHHHHH
Confidence 36 578999999999999999997754 68 21 122 5455565 3455555 356789999999
Q ss_pred HHHHHHhcCCCCCCCCceEEEeeecCCC-CCCCCCCC-C--CCCCceEEEcCCCceEEEEecCCCC----CCCCeeEEEE
Q psy4895 124 YLERINQLGVFESVKPNHVLINEYLAGQ-GIMPHFDG-P--LYYPTISTISCGSHTILNFYEPDRT----SEGSEVCSIF 195 (430)
Q Consensus 124 l~~rl~~~~~~~~~~pn~~lvN~Y~~G~-~I~~H~D~-~--~~~~~Ia~lSLgs~~~m~f~~~~~~----~~~~~~~~l~ 195 (430)
+.+++++.. +..||+|+||+|.+|+ +|++|.|+ . .++++|++||||++|+|.|+++... .+....+++.
T Consensus 87 l~~~~~~~~---g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (204)
T 3s57_A 87 IRDHVSGVT---GQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLP 163 (204)
T ss_dssp HHHHHHHHH---CCCCSEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCSSSCSCCCCCEEEE
T ss_pred HHHHHHHHh---CCCCceeEEEEECCCCCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCCccccccCCceEEEE
Confidence 999997754 5799999999999999 99999999 4 3689999999999999999986421 1234679999
Q ss_pred eCCCeEEEecchhhccccccccCCCCCCCccccccccCCCCCcccccccccccceEEE
Q psy4895 196 VDARSLLILQDDMYEKYVHGISSKTDDTLSSDILNCCSSSPNQMLNRSTRAGKKAVLF 253 (430)
Q Consensus 196 L~~gSlliMsG~aR~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~l~r~~R~s~t~~lf 253 (430)
|++||||||+|++|+.|+|+|++++. .++.|||+||+.+
T Consensus 164 L~~GsllvM~g~~q~~w~H~Ip~~~~-------------------~~~~RislTFR~i 202 (204)
T 3s57_A 164 LAHGSLLMMNHPTNTHWYHSLPVRKK-------------------VLAPRVNLTFRKI 202 (204)
T ss_dssp ECTTEEEEEETTHHHHEEEEECCCTT-------------------CCSCEEEEEEECB
T ss_pred CCCCCEEEECchhhheeEeeccccCC-------------------CCCCEEEEEeeee
Confidence 99999999999999999999999753 4688999999754
No 24
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=99.96 E-value=3.6e-29 Score=232.30 Aligned_cols=181 Identities=16% Similarity=0.197 Sum_probs=137.7
Q ss_pred ccCCCceEEeCCCCCHHHHHHHHHHHhcCCC-Cccc--------ccccceE-----EEec----CcCCC----CCCCCCC
Q psy4895 59 KKAPPTVYYIPDFITREEESHLLNKIYSVPK-PKWT--------QLSNRKL-----QNWG----GIPHP----KGMIAEK 116 (430)
Q Consensus 59 ~~lp~Gl~~ipdfls~~ee~~Ll~~l~~~~~-~~w~--------~~~~rr~-----~~~G----~~~~~----~~~~~~~ 116 (430)
+.+.+|..++|+|+. ++++.|++++.+... .++. .++-|.. .++| |.|+. .+..+.+
T Consensus 3 ~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~~~pgg~~~s~~~~~~g~~~W~~d~~~Y~Ys~~~~~~~~pw~~ 81 (211)
T 3i3q_A 3 EPLAAGAVILRRFAF-NAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPA 81 (211)
T ss_dssp CCCBTTBEEETTTTT-TTHHHHHHHHHHHHHHSCCBCCBCTTSCBCSSEEEEESSBEEEEETTEEEEESBCTTTSSBCCC
T ss_pred eecCCCCEEECCcCh-HHHHHHHHHHHHHHhcCCCceeEcCCCCcCchhhcccccceeecCCCCcCcCCCccCCCCCCCc
Confidence 345679999999998 678899999875310 0111 2222322 1222 33332 2234677
Q ss_pred ChhHHHHHHHHHHhcCCCCCCCCceEEEeeecCCCCCCCCCCC--CCCCCceEEEcCCCceEEEEecCCCCCCCCeeEEE
Q psy4895 117 LPEWLDTYLERINQLGVFESVKPNHVLINEYLAGQGIMPHFDG--PLYYPTISTISCGSHTILNFYEPDRTSEGSEVCSI 194 (430)
Q Consensus 117 ~P~~l~~l~~rl~~~~~~~~~~pn~~lvN~Y~~G~~I~~H~D~--~~~~~~Ia~lSLgs~~~m~f~~~~~~~~~~~~~~l 194 (430)
+|++|..+.+++.....++.+.||+|+||+|.+|++|++|+|. ..|+++|++||||++|+|.|++... .....++
T Consensus 82 ~P~~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~~~---~~~~~~i 158 (211)
T 3i3q_A 82 MPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKR---NDPLKRL 158 (211)
T ss_dssp CCHHHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSCTTSCEEEEEEESCEEEEECCSST---TSCCEEE
T ss_pred hHHHHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccccCCCEEEEECCCCeEEEEecccC---CCceEEE
Confidence 8889999999998876666789999999999999999999994 4789999999999999999998643 2568899
Q ss_pred EeCCCeEEEecchhhccccccccCCCCCCCccccccccCCCCCcccccccccccceEEEeecCC
Q psy4895 195 FVDARSLLILQDDMYEKYVHGISSKTDDTLSSDILNCCSSSPNQMLNRSTRAGKKAVLFVCLGN 258 (430)
Q Consensus 195 ~L~~gSlliMsG~aR~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~l~r~~R~s~t~~lf~c~~N 258 (430)
.|++|||+||+|++|+ |+|+|++++.+..+ +.++.|+|+||+.+.=..|
T Consensus 159 ~L~~GsllvM~G~~r~-~~H~I~~~~~~~~p--------------~~~~~RIsLTFR~~~~~~~ 207 (211)
T 3i3q_A 159 LLEHGDVVVWGGESRL-FYHGIQPLKAGFHP--------------LTIDCRYNLTFRQAGKKEN 207 (211)
T ss_dssp EECTTCEEEECGGGTT-CCEEECCCCCCCBT--------------TTBTCEEEEEEECCSCC--
T ss_pred ECCCCCEEEECchHHc-eEeccCcccCCcCC--------------CCCCCEEEEEeeeccCCcC
Confidence 9999999999999998 99999998875432 3688999999987654444
No 25
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=97.11 E-value=0.0025 Score=58.89 Aligned_cols=159 Identities=16% Similarity=0.135 Sum_probs=87.6
Q ss_pred CCCceEEeCCCCCHHHHHHHHHHHhcCCC-CcccccccceEEEecCcCCCCCCCCCCChhHHHHHHHHHHhcCCCCCCCC
Q psy4895 61 APPTVYYIPDFITREEESHLLNKIYSVPK-PKWTQLSNRKLQNWGGIPHPKGMIAEKLPEWLDTYLERINQLGVFESVKP 139 (430)
Q Consensus 61 lp~Gl~~ipdfls~~ee~~Ll~~l~~~~~-~~w~~~~~rr~~~~G~~~~~~~~~~~~~P~~l~~l~~rl~~~~~~~~~~p 139 (430)
+-|-+.+++||||++|.+.|++....... ..|.....-....-..+.+....+...-.+....|.+||.....++-...
T Consensus 18 ~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~i~~ri~~~~gl~~~~~ 97 (224)
T 2jig_A 18 WSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTMIPLENH 97 (224)
T ss_dssp TTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTTCSHHHHHHHHHHHHHHTCCGGGB
T ss_pred CCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCCCCHHHHHHHHHHHHHhCCCcccc
Confidence 33689999999999999999998864210 01110000000000000000001111124567778888877655533344
Q ss_pred ceEEEeeecCCCCCCCCCCC-C-C-------CCCceEEEcC-------CCceEEEEecCCCC--C--C-CCeeEEEEeCC
Q psy4895 140 NHVLINEYLAGQGIMPHFDG-P-L-------YYPTISTISC-------GSHTILNFYEPDRT--S--E-GSEVCSIFVDA 198 (430)
Q Consensus 140 n~~lvN~Y~~G~~I~~H~D~-~-~-------~~~~Ia~lSL-------gs~~~m~f~~~~~~--~--~-~~~~~~l~L~~ 198 (430)
....++.|.+|+...+|.|. . . .+..++++-+ |.+.+|........ . + ....+.|..+.
T Consensus 98 e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~ 177 (224)
T 2jig_A 98 EGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIK 177 (224)
T ss_dssp CCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCT
T ss_pred cceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceEEeccc
Confidence 56788899999999999997 2 1 1345555431 33333311100000 0 0 01257899999
Q ss_pred CeEEEec-----chhhccccccccCC
Q psy4895 199 RSLLILQ-----DDMYEKYVHGISSK 219 (430)
Q Consensus 199 gSlliMs-----G~aR~~w~H~I~~~ 219 (430)
|++++.. |..-....|++.++
T Consensus 178 G~al~f~~~~~~g~~d~~~lH~~~PV 203 (224)
T 2jig_A 178 GDALMFYSLKPDGSNDPASLHGSCPT 203 (224)
T ss_dssp TCEEEEESBCTTSCBCGGGCEEECCE
T ss_pred CcEEEEEeeCCCCCCCCCCcccCCcc
Confidence 9999984 33334456888774
No 26
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=96.86 E-value=0.0018 Score=59.63 Aligned_cols=142 Identities=17% Similarity=0.144 Sum_probs=84.5
Q ss_pred CCceEEeCCCCCHHHHHHHHHHHhcCCCCccccccc-ceEEEecCcCCCCCCCCCCChhHHHHHHHHHHhcCCCCCCCCc
Q psy4895 62 PPTVYYIPDFITREEESHLLNKIYSVPKPKWTQLSN-RKLQNWGGIPHPKGMIAEKLPEWLDTYLERINQLGVFESVKPN 140 (430)
Q Consensus 62 p~Gl~~ipdfls~~ee~~Ll~~l~~~~~~~w~~~~~-rr~~~~G~~~~~~~~~~~~~P~~l~~l~~rl~~~~~~~~~~pn 140 (430)
-|.+.+++||||++|.+.|++..... +..-.. .....-.++.+ ++..... .+....|.+|+.....++-...+
T Consensus 38 ~P~i~~~~~fLs~~Ec~~Li~~a~~~----l~~s~v~~~~~~~~~RtS-~~~wl~~-~~~v~~i~~Ri~~~~gl~~~~~E 111 (216)
T 3itq_A 38 EPLIVVLGNVLSDEECDELIELSKSK----LARSKVGSSRDVNDIRTS-SGAFLDD-NELTAKIEKRISSIMNVPASHGE 111 (216)
T ss_dssp TTTEEEEESCSCHHHHHHHHHHHHHH----HC--------CCCCGGGT-TCEECCC-CHHHHHHHHHHHHHHTSCGGGBC
T ss_pred CCCEEEECCcCCHHHHHHHHHHhhcc----cccceeccCCccCCcEee-eeEEeCC-cHHHHHHHHHHHHhcCceecccc
Confidence 36999999999999999999876532 211000 00000000111 1111122 56677888888887655323345
Q ss_pred eEEEeeecCCCCCCCCCCCC-C-----CCCceEEEcC-------CCceEEEEecCCCCCCCCeeEEEEeCCCeEEEecc-
Q psy4895 141 HVLINEYLAGQGIMPHFDGP-L-----YYPTISTISC-------GSHTILNFYEPDRTSEGSEVCSIFVDARSLLILQD- 206 (430)
Q Consensus 141 ~~lvN~Y~~G~~I~~H~D~~-~-----~~~~Ia~lSL-------gs~~~m~f~~~~~~~~~~~~~~l~L~~gSlliMsG- 206 (430)
...+..|.+|+...+|.|.. . .+..++++-+ |.+.+| . ...+.|..+.|++++...
T Consensus 112 ~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~F----p------~~~~~V~P~~G~al~f~~~ 181 (216)
T 3itq_A 112 GLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFF----P------KLNLSVHPRKGMAVYFEYF 181 (216)
T ss_dssp CCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEE----T------TTTEEECCCTTCEEEEECC
T ss_pred ceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEe----c------CCCCEEecCCCeEEEEecc
Confidence 67888999999999999982 2 2444544422 222222 0 124678888999999864
Q ss_pred ----hhhccccccccCC
Q psy4895 207 ----DMYEKYVHGISSK 219 (430)
Q Consensus 207 ----~aR~~w~H~I~~~ 219 (430)
.......|++.++
T Consensus 182 ~~~g~~d~~~lH~~~PV 198 (216)
T 3itq_A 182 YQDQSLNELTLHGGAPV 198 (216)
T ss_dssp CSSHHHHHTTCEEECCE
T ss_pred CCCCCCCCcccccccee
Confidence 3334557888885
No 27
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=96.66 E-value=0.0036 Score=58.72 Aligned_cols=140 Identities=16% Similarity=0.181 Sum_probs=78.8
Q ss_pred CCceEEeCCCCCHHHHHHHHHHHhcCCCCcccccccceEEEecCc---CCCCCCCCCCChhHHHHHHHHHHhcCCCC---
Q psy4895 62 PPTVYYIPDFITREEESHLLNKIYSVPKPKWTQLSNRKLQNWGGI---PHPKGMIAEKLPEWLDTYLERINQLGVFE--- 135 (430)
Q Consensus 62 p~Gl~~ipdfls~~ee~~Ll~~l~~~~~~~w~~~~~rr~~~~G~~---~~~~~~~~~~~P~~l~~l~~rl~~~~~~~--- 135 (430)
+.++..++||||++|.+.|++.+... .|...... =|.. +..+..+...- +....+.++|.......
T Consensus 18 ~~~i~~i~dvLs~~Ec~~li~~~e~~---~~~dg~~t----~g~~~~~vr~n~~l~~d~-~~~~~l~~~i~~~l~~~~~f 89 (243)
T 3dkq_A 18 QGMLIEIPNVFSKQEVSHLREQLDAR---RWIDGNQT----SGAMATTRKRNQQLDKDD-PVAVALGQQIMDRLLAHPQF 89 (243)
T ss_dssp BTTBEEECCSSCHHHHHHHHHHHHTS---CCEEECCC----SSBSSCCCEEEEECCTTC-HHHHHHHHHHHHHHHTCHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHHHhhC---CCccCccc----CCCccccceeeeEECCCC-HHHHHHHHHHHHHHccCcch
Confidence 36899999999999999999999765 36531110 0110 00011111111 25566666665542110
Q ss_pred -----CCCCceEEEeeecCCCCCCCCCCCCCC---C---CceEE--EcCCCc-----eEEEEecCCCCCCCCeeEEEEeC
Q psy4895 136 -----SVKPNHVLINEYLAGQGIMPHFDGPLY---Y---PTIST--ISCGSH-----TILNFYEPDRTSEGSEVCSIFVD 197 (430)
Q Consensus 136 -----~~~pn~~lvN~Y~~G~~I~~H~D~~~~---~---~~Ia~--lSLgs~-----~~m~f~~~~~~~~~~~~~~l~L~ 197 (430)
+.......++.|.+|+...+|+|...- + ..+++ +=|..+ -.+.|... .....|..+
T Consensus 90 ~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~------~~~~~V~P~ 163 (243)
T 3dkq_A 90 VSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT------YGQQSIKLS 163 (243)
T ss_dssp HHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET------TEEEEECCC
T ss_pred hhcccccccccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC------CCcEEEecC
Confidence 012234889999999999999998311 1 11111 111110 11222221 235678899
Q ss_pred CCeEEEecchhhccccccccCC
Q psy4895 198 ARSLLILQDDMYEKYVHGISSK 219 (430)
Q Consensus 198 ~gSlliMsG~aR~~w~H~I~~~ 219 (430)
.|++++.... ..|++.++
T Consensus 164 ~G~~v~F~s~----~lH~v~pV 181 (243)
T 3dkq_A 164 AGSLVLYPSS----SLHQVTPV 181 (243)
T ss_dssp TTCEEEEETT----SEEEECCE
T ss_pred CCEEEEECCC----CeEcCccc
Confidence 9999998653 47888884
No 28
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=96.27 E-value=0.0015 Score=64.50 Aligned_cols=56 Identities=18% Similarity=0.236 Sum_probs=36.0
Q ss_pred cccccccccCCCCceeeccCCcChHHHHHHHHHHhhcccccC-CCCccccccccccC
Q psy4895 6 VNVEKYVIKKAPPTVYYIPDFITREEESHLLNKIYSHNLLMT-GNNVNVEKYVIKKA 61 (430)
Q Consensus 6 ~~~~~~~~~~~p~~~~yip~fi~~~ee~~ll~~i~~~~~~~~-~~~~~l~~~~~~~l 61 (430)
..++.+++..+|+.+||||+|||++||+.|+++|.-.+.... ..+..++.+++...
T Consensus 99 ~~~~~~~~~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~~~~~l~~Rr~~~y 155 (345)
T 3tht_A 99 VQWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHF 155 (345)
T ss_dssp EEEEEEECCSCCTTEEEETTCSCHHHHHHHHTTCC----------------CEEECC
T ss_pred ccccccccccCCCceEEEcCcCCHHHHHHHHHhcccCCccccccCcccccCceEEEE
Confidence 457788899999999999999999999999999986654211 11445666666655
No 29
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=95.56 E-value=0.027 Score=56.39 Aligned_cols=106 Identities=13% Similarity=0.107 Sum_probs=70.8
Q ss_pred CCceEEEeeecCCC---------------CCCCCCCCC-CCCCceEEEcCCCc-----------------eE--EEEecC
Q psy4895 138 KPNHVLINEYLAGQ---------------GIMPHFDGP-LYYPTISTISCGSH-----------------TI--LNFYEP 182 (430)
Q Consensus 138 ~pn~~lvN~Y~~G~---------------~I~~H~D~~-~~~~~Ia~lSLgs~-----------------~~--m~f~~~ 182 (430)
.+|-.+||++.|.+ .++||.|.. .-...||--|--+. .+ .-|+-.
T Consensus 188 ~fNvTLlN~Mdp~~m~~LKeEpyfgMGKmaVsWHhDenL~~~StVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglkia 267 (495)
T 3lfm_A 188 AYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLVDRSAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKIS 267 (495)
T ss_dssp CCCEEEEEEECSSCSSSCCBCSSSCCCBEEEEEECCCSBCTTCCEEEEEEECCC-------------CCTTSEEEEEEET
T ss_pred eeehhhhhccCcccccccccccccCCcceeeeeccccccccCcceEEEEeecCCccccccccccCCCCCccceeEeeeec
Confidence 78999999998843 267888883 22345665542211 11 111110
Q ss_pred CCCCCCCeeEEEEeCCCeEEEecchhhccccccccCCCCCCCccccccccCCCCCcccccccccccceEEEeecCCCCCC
Q psy4895 183 DRTSEGSEVCSIFVDARSLLILQDDMYEKYVHGISSKTDDTLSSDILNCCSSSPNQMLNRSTRAGKKAVLFVCLGNICRS 262 (430)
Q Consensus 183 ~~~~~~~~~~~l~L~~gSlliMsG~aR~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~l~r~~R~s~t~~lf~c~~N~~RS 262 (430)
- +-..+.+.|.|++||.|.|-++..-.++|+|.... ..|.|=|.+.-.|..++-
T Consensus 268 w--Di~tP~L~vpL~sgd~Y~Mldd~N~~HqH~VlaG~----------------------~~RfSSTHRVA~~s~gT~-- 321 (495)
T 3lfm_A 268 W--DIETPGLAIPLHQGDCYFMLDDLNATHQHCVLAGS----------------------QPRFSSTHRVAECSTGTL-- 321 (495)
T ss_dssp T--CCSSCEEEEEECTTCEEEECTTHHHHEEEEEECCS----------------------SCEEEEEEECBCCTTCBH--
T ss_pred c--cCCCCceeeecCCCCeeeecchhhhhhhhhhhcCC----------------------CccccccceeeeecCChH--
Confidence 0 02368999999999999999999999999998842 256777777777777764
Q ss_pred hhHHHHHHHH
Q psy4895 263 PMAACVFKYL 272 (430)
Q Consensus 263 ~mAea~~~~~ 272 (430)
+.|.++-
T Consensus 322 ---~YI~~rC 328 (495)
T 3lfm_A 322 ---DYILQRC 328 (495)
T ss_dssp ---HHHHHHH
T ss_pred ---HHHHHHH
Confidence 5555443
No 30
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=93.67 E-value=1.3 Score=41.26 Aligned_cols=149 Identities=15% Similarity=0.174 Sum_probs=73.2
Q ss_pred CceEEeCCCCCHHHHHHHHHHHhcCC-CCcccccccceEEEecCcCCC--CCC-----CCCCChhH--HHHHHHHHHhc-
Q psy4895 63 PTVYYIPDFITREEESHLLNKIYSVP-KPKWTQLSNRKLQNWGGIPHP--KGM-----IAEKLPEW--LDTYLERINQL- 131 (430)
Q Consensus 63 ~Gl~~ipdfls~~ee~~Ll~~l~~~~-~~~w~~~~~rr~~~~G~~~~~--~~~-----~~~~~P~~--l~~l~~rl~~~- 131 (430)
.|+.+++|||++++.+.|++.+.... ...|.....-+ ..-+...+. +.. .....+.. +...++.+...
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~-~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~l 104 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVS-QKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHC 104 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEE-CCSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCcccccccc-ccccccccccccceeeecccccchhHHHHHHHHHHHHHHHH
Confidence 59999999999999999999887520 00121100000 000000000 000 00112221 33344444332
Q ss_pred CC-CCCCC---CceEEEeeecC-CCCCCCCCCCCCCCCceEEEcC--CC-------ceEEEEecCCCCCCCCeeEEEEeC
Q psy4895 132 GV-FESVK---PNHVLINEYLA-GQGIMPHFDGPLYYPTISTISC--GS-------HTILNFYEPDRTSEGSEVCSIFVD 197 (430)
Q Consensus 132 ~~-~~~~~---pn~~lvN~Y~~-G~~I~~H~D~~~~~~~Ia~lSL--gs-------~~~m~f~~~~~~~~~~~~~~l~L~ 197 (430)
.. +..+. -..+.+..|.+ |++..+|.|.+.-+...+++-| .. .-.++|.... .....+|.-.
T Consensus 105 n~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~----~~~~~~v~P~ 180 (247)
T 2hbt_A 105 NGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEG----KAQFADIEPK 180 (247)
T ss_dssp TTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTT----CSSCEEECCB
T ss_pred hhhcCcccccccceEEEEEecCCCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCC----CCceEEEEcC
Confidence 10 11111 13478889996 9999999999422222222111 11 1122222221 1245677777
Q ss_pred CCeEEEecchhhccccccccC
Q psy4895 198 ARSLLILQDDMYEKYVHGISS 218 (430)
Q Consensus 198 ~gSlliMsG~aR~~w~H~I~~ 218 (430)
.|.++++....+ ..|+|.+
T Consensus 181 ~grlv~F~s~~~--~~H~V~p 199 (247)
T 2hbt_A 181 FDRLLFFWSDRR--NPHEVQP 199 (247)
T ss_dssp TTEEEEEECSTT--CCEEECC
T ss_pred CCEEEEEecCCC--ceeeecc
Confidence 899999985433 3588876
No 31
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=91.34 E-value=0.12 Score=48.17 Aligned_cols=32 Identities=25% Similarity=0.511 Sum_probs=28.3
Q ss_pred cccccCCCC---ceeeccCCcChHHHHHHHHHHhh
Q psy4895 10 KYVIKKAPP---TVYYIPDFITREEESHLLNKIYS 41 (430)
Q Consensus 10 ~~~~~~~p~---~~~yip~fi~~~ee~~ll~~i~~ 41 (430)
.|.|..+|+ .++|||+|||++||..||++|..
T Consensus 29 ~~~~~~~p~~i~gl~~~~~fl~~~e~~~Ll~~l~~ 63 (238)
T 2iuw_A 29 VYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQ 63 (238)
T ss_dssp EEEEECCSSSCEEEEEETTSSCHHHHHHHHHHHHH
T ss_pred ceeeecCCCCCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 377888887 49999999999999999999975
No 32
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=89.29 E-value=0.2 Score=45.00 Aligned_cols=104 Identities=20% Similarity=0.241 Sum_probs=60.2
Q ss_pred ccceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCC-CceEEeecccCCCCCCCCCCHH---
Q psy4895 247 GKKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQA-DRWTVDSAGTGDWHVGHPADSR--- 322 (430)
Q Consensus 247 s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~-~~~~v~SAGt~p~~~g~~~~~~--- 322 (430)
+..++-+||..|--||=-|-.++++. .|.+.|-|||. .+--|+++ ++-.|+.=|| || +.+...
T Consensus 24 ~~Lr~avVCaSN~NRSMEAH~~L~k~--------Gf~V~SfGTGs-~VkLPGps~d~PnvY~FgT-~Y---~~iy~dL~~ 90 (214)
T 4h3k_B 24 SPLRVAVVSSSNQNRSMEAHNILSKR--------GFSVRSFGTGT-HVKLPGPAPDKPNVYDFKT-TY---DQMYNDLLR 90 (214)
T ss_dssp --CEEEEEESSSSSHHHHHHHHHHHT--------TCEEEEEECSS-SEEECCSSTTCCEEECTTS-CH---HHHHHHHHH
T ss_pred CCCeEEEECCCCcchhHHHHHHHHHC--------CCceEeecCCC-ccCCCCCCCCCCCccCCCC-CH---HHHHHHHHh
Confidence 45678999999999999888777542 37899999975 22233333 2445555554 32 111111
Q ss_pred -HHHHHHhCCC--------CCCCcccccchhhhccCCEEEEeCcccHHHHH
Q psy4895 323 -ARDVLAKHNV--------PCQHQARQVIEEDFGKFDYLFVMDESNFANVK 364 (430)
Q Consensus 323 -a~~~L~e~Gi--------d~~~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~ 364 (430)
-.+.-.+.|| .+...|.++- +-...||+|||.++.-.+.+.
T Consensus 91 kd~~lY~~NGlL~MLdRN~~iK~~PER~Q-~~~~~fDvViTcEERvfD~Vv 140 (214)
T 4h3k_B 91 KDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKDLFDLILTCEERVYDQVV 140 (214)
T ss_dssp HHHHHHHHTSHHHHHHHHHTTCSSCCBGG-GCCCCCSEEEESSHHHHHHHH
T ss_pred HCHHHHHHcCcHHHHhCCccccCCChhhh-ccCCCccEEEEccchhHHHHH
Confidence 1111134454 2222344432 233569999999988877665
No 33
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=86.12 E-value=7.4 Score=40.74 Aligned_cols=150 Identities=13% Similarity=0.083 Sum_probs=75.4
Q ss_pred ceEEeCCCCCHHHHHHHHHHHhcCCCCcccccccceEE--EecCcCCCCCCCC---CCChhHHHHHHHHH---------H
Q psy4895 64 TVYYIPDFITREEESHLLNKIYSVPKPKWTQLSNRKLQ--NWGGIPHPKGMIA---EKLPEWLDTYLERI---------N 129 (430)
Q Consensus 64 Gl~~ipdfls~~ee~~Ll~~l~~~~~~~w~~~~~rr~~--~~G~~~~~~~~~~---~~~P~~l~~l~~rl---------~ 129 (430)
-..+++|||+++..+.|.+++.... .|......-.. +-|..-...+..+ ..+|. +..+++.| .
T Consensus 35 pH~VIdnfl~d~lle~V~~Efp~~i--~f~~KetDlYk~~QsgdLanl~~l~~e~l~~lp~-l~~Lr~~L~S~~Fr~~Ls 111 (633)
T 3kt7_A 35 NWGTIHELVNDDLLRAVRKEIETEI--HFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPN-LFKLRQILYSKQYRDFFG 111 (633)
T ss_dssp CCEEESSCBCHHHHHHHHHHHHHHC--CCEEEECSSEEEEECCCTTCTTSCCTTCCTTCHH-HHHHHHHHTSHHHHHHHH
T ss_pred ceEEECCCCCHHHHHHHHHHhhhcc--CcccccccccceeccccccccccCChhhhccChH-HHHHHHHHhcHHHHHHHH
Confidence 4568899999988889998887322 35532222222 2232211122111 23454 33333332 2
Q ss_pred hcCCCCCC--CCceEEEeeecCCCCCCCCCCCCCCCCc-eEEEc-CC----------CceEEEEecCCC--CCCCCeeEE
Q psy4895 130 QLGVFESV--KPNHVLINEYLAGQGIMPHFDGPLYYPT-ISTIS-CG----------SHTILNFYEPDR--TSEGSEVCS 193 (430)
Q Consensus 130 ~~~~~~~~--~pn~~lvN~Y~~G~~I~~H~D~~~~~~~-Ia~lS-Lg----------s~~~m~f~~~~~--~~~~~~~~~ 193 (430)
+...+++. .+--+.++.|.+|+.+..|.|.. +.. |+.|= |- ......|..... + .......
T Consensus 112 ~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~--~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P-~~d~~~~ 188 (633)
T 3kt7_A 112 YVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI--GSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVP-HSDPSAK 188 (633)
T ss_dssp HHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC--TTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEE-CSSCSEE
T ss_pred HHhCCcccCCCceeEEEEEeCCCCeeeecCCCC--CCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCC-CCCceEE
Confidence 22222111 23348899999999999999962 222 22221 11 111222221100 0 0123445
Q ss_pred EEeCCCeEEEecchhhccccccccCCC
Q psy4895 194 IFVDARSLLILQDDMYEKYVHGISSKT 220 (430)
Q Consensus 194 l~L~~gSlliMsG~aR~~w~H~I~~~~ 220 (430)
|.=..|++++|.-.-...| |+|.++.
T Consensus 189 I~P~fNrLV~F~vsp~~S~-H~V~eV~ 214 (633)
T 3kt7_A 189 LVPQFNQIAFFKVLPGFSF-HDXEEVK 214 (633)
T ss_dssp ECCCTTEEEEEECCTTTCC-EEECCBC
T ss_pred EecCCCeEEEEEcCCCCCc-CCCCccC
Confidence 5555788999876532335 9988753
No 34
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=84.13 E-value=1.1 Score=36.47 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=52.2
Q ss_pred ccccceE-EEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHH
Q psy4895 245 RAGKKAV-LFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRA 323 (430)
Q Consensus 245 R~s~t~~-lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a 323 (430)
|++++.+ ...|....+.+-||+.-+++.++++|. .+.|..-|+..
T Consensus 3 ~m~mkIvaVTaCptGiAHTyMAAeaL~~aA~~~G~-----------------------~ikVEtqGs~G----------- 48 (111)
T 2kyr_A 3 HMSKKLIALCACPMGLAHTFMAAQALEEAAVEAGY-----------------------EVKIETQGADG----------- 48 (111)
T ss_dssp -CCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTSS-----------------------EEEEEEEETTE-----------
T ss_pred cccccEEEEEcCCCcHHHHHHHHHHHHHHHHHCCC-----------------------eEEEEecCCCC-----------
Confidence 4444333 378999999999999999999887654 36676666542
Q ss_pred HHHHHhCCCCCCCcccccchhhhccCCEEEEeCcccHH
Q psy4895 324 RDVLAKHNVPCQHQARQVIEEDFGKFDYLFVMDESNFA 361 (430)
Q Consensus 324 ~~~L~e~Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~ 361 (430)
.-..||++++.++|+||...+...+
T Consensus 49 -------------~~n~Lt~~~I~~Ad~VIiA~d~~v~ 73 (111)
T 2kyr_A 49 -------------IQNRLTAQDIAEATIIIHSVAVTPE 73 (111)
T ss_dssp -------------EESCCCHHHHHHCSEEEEEESSCCT
T ss_pred -------------cCCCCCHHHHHhCCEEEEEeCCCcC
Confidence 3457999999999999998876653
No 35
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=82.41 E-value=1 Score=36.37 Aligned_cols=70 Identities=17% Similarity=0.250 Sum_probs=49.9
Q ss_pred eEEEe--ecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHH
Q psy4895 250 AVLFV--CLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVL 327 (430)
Q Consensus 250 ~~lf~--c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L 327 (430)
+++-| |....+-|-||+.-+++.++++|. .+.|..-|+..
T Consensus 4 kivaVtaCptGiAhTymAAeaLekaA~~~G~-----------------------~ikVEtqgs~g--------------- 45 (106)
T 2m1z_A 4 KIIAVTACATGVAHTYMAAQALKKGAKKMGN-----------------------LIKVETQGATG--------------- 45 (106)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHHHHHHTC-----------------------EEEEEEEETTE---------------
T ss_pred cEEEEEECCCcHHHHHHHHHHHHHHHHHCCC-----------------------EEEEEEecCcc---------------
Confidence 34444 999999999987778888877654 35666555542
Q ss_pred HhCCCCCCCcccccchhhhccCCEEEEeCcccHHHHHHH
Q psy4895 328 AKHNVPCQHQARQVIEEDFGKFDYLFVMDESNFANVKAF 366 (430)
Q Consensus 328 ~e~Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~~~ 366 (430)
....||++++.++|.||...+....+..++
T Consensus 46 ---------~~n~Lt~~~I~~AD~VIia~d~~v~~~~RF 75 (106)
T 2m1z_A 46 ---------IENELTEKDVNIGEVVIFAVDTKVRNKERF 75 (106)
T ss_dssp ---------ESSCCCHHHHHHCSEEEEEESSCCSTHHHH
T ss_pred ---------ccCCCCHHHHhhCCEEEEeccccccchhcc
Confidence 235689999999999999987665333333
No 36
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=73.55 E-value=3.7 Score=33.02 Aligned_cols=64 Identities=14% Similarity=0.208 Sum_probs=47.6
Q ss_pred EEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHHhC
Q psy4895 251 VLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLAKH 330 (430)
Q Consensus 251 ~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~e~ 330 (430)
...-|....+.+-||+..+++-+.++|. .+.|..-|+..
T Consensus 7 aVTaCptGiAhTymAaeaL~~aA~~~G~-----------------------~ikVEtqGs~G------------------ 45 (106)
T 2r4q_A 7 AVTACPTGIAHTFMAADALKEKAKELGV-----------------------EIKVETNGSSG------------------ 45 (106)
T ss_dssp EEEECSCC--CHHHHHHHHHHHHHHHTC-----------------------CEEEEEEETTE------------------
T ss_pred EEecCCCcHHHHHHHHHHHHHHHHHCCC-----------------------eEEEEecCCCC------------------
Confidence 3567999999999999999998887664 36666655542
Q ss_pred CCCCCCcccccchhhhccCCEEEEeCcccHH
Q psy4895 331 NVPCQHQARQVIEEDFGKFDYLFVMDESNFA 361 (430)
Q Consensus 331 Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~ 361 (430)
.-..|+++++.++|+||...+...+
T Consensus 46 ------~~n~Lt~~~I~~Ad~VIiA~d~~v~ 70 (106)
T 2r4q_A 46 ------IKHKLTAQEIEDAPAIIVAADKQVE 70 (106)
T ss_dssp ------EESCCCHHHHHHCSCEEEEESSCCC
T ss_pred ------ccCCCCHHHHHhCCEEEEEeCCccC
Confidence 3457899999999999998876544
No 37
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=71.83 E-value=3.7 Score=33.03 Aligned_cols=64 Identities=16% Similarity=0.227 Sum_probs=49.3
Q ss_pred EEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHHhC
Q psy4895 251 VLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLAKH 330 (430)
Q Consensus 251 ~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~e~ 330 (430)
...-|....+.+-||+..+++-+.++|. .+.|..-|+..
T Consensus 7 aVTaCptGiAhTymAaeaL~~aA~~~G~-----------------------~ikVEtqGs~G------------------ 45 (106)
T 2r48_A 7 AITSCPNGIAHTYMAAENLQKAADRLGV-----------------------SIKVETQGGIG------------------ 45 (106)
T ss_dssp EEEECSSCSHHHHHHHHHHHHHHHHHTC-----------------------EEEEEEEETTE------------------
T ss_pred EEecCCCcHHHHHHHHHHHHHHHHHCCC-----------------------eEEEEecCCCC------------------
Confidence 3567999999999999999998887654 36666656542
Q ss_pred CCCCCCcccccchhhhccCCEEEEeCcccHH
Q psy4895 331 NVPCQHQARQVIEEDFGKFDYLFVMDESNFA 361 (430)
Q Consensus 331 Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~~~ 361 (430)
.-..|+++++.++|+||...+...+
T Consensus 46 ------~~n~Lt~~~I~~Ad~VIiA~d~~v~ 70 (106)
T 2r48_A 46 ------VENKLTEEEIREADAIIIAADRSVN 70 (106)
T ss_dssp ------EESCCCHHHHHHCSEEEEEESSCCC
T ss_pred ------ccCCCCHHHHHhCCEEEEEeCCccC
Confidence 3457899999999999999876544
No 38
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=64.40 E-value=9.5 Score=34.43 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=49.5
Q ss_pred CCceEEEeeecCCCCCCCCCCCCCCCCceEEEcCCC-ceEEEEecCCCC----------C---CCCeeEEEEeCCCeEEE
Q psy4895 138 KPNHVLINEYLAGQGIMPHFDGPLYYPTISTISCGS-HTILNFYEPDRT----------S---EGSEVCSIFVDARSLLI 203 (430)
Q Consensus 138 ~pn~~lvN~Y~~G~~I~~H~D~~~~~~~Ia~lSLgs-~~~m~f~~~~~~----------~---~~~~~~~l~L~~gSlli 203 (430)
.+..+-+|.|.+|+...+|.|...+-..|.=|+... ...+.|...... + .......+.-..|.|+|
T Consensus 101 ~i~~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvl 180 (216)
T 2rg4_A 101 RLEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLL 180 (216)
T ss_dssp EEEEEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEE
T ss_pred EEeeEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEE
Confidence 445788999999999999999743222344444432 235666543210 0 01233467778999999
Q ss_pred ecchhhccccccccCCC
Q psy4895 204 LQDDMYEKYVHGISSKT 220 (430)
Q Consensus 204 MsG~aR~~w~H~I~~~~ 220 (430)
+ ++. ..|+|.+..
T Consensus 181 F--pS~--l~H~V~p~~ 193 (216)
T 2rg4_A 181 W--ESW--LRHEVPMNM 193 (216)
T ss_dssp E--ETT--SCEEECCCC
T ss_pred E--CCC--CEEeccCCC
Confidence 9 455 459999953
No 39
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=63.75 E-value=3.1 Score=37.00 Aligned_cols=104 Identities=22% Similarity=0.266 Sum_probs=58.1
Q ss_pred ccceEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCC-CceEEeecccCCCCCCCCCCHHH--
Q psy4895 247 GKKAVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQA-DRWTVDSAGTGDWHVGHPADSRA-- 323 (430)
Q Consensus 247 s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~-~~~~v~SAGt~p~~~g~~~~~~a-- 323 (430)
+..++-+||..|--||--|-.++++ + .|.+.|-|||. ++--|+++ ++-.|+.=|| || +.+...-
T Consensus 8 ~~l~~avVCaSN~NRSMEaH~~L~k----~----G~~V~SfGTGs-~VrLPGps~d~PNvY~FgT-~Y---~~iy~dL~~ 74 (198)
T 3p9y_A 8 SKLAVAVVDSSNMNRSMEAHNFLAK----K----GFNVRSYGTGE-RVKLPGMAFDKPNVYEFGT-KY---EDIYRDLES 74 (198)
T ss_dssp TCCEEEEEESSSSSHHHHHHHHHHH----T----TCEEEEEECSS-SEEECCSSTTCCEEECTTC-CH---HHHHHHHHH
T ss_pred CCceEEEEcCCCCcccHHHHHHHHh----C----CCceeecCCCc-eeEcCCCCCCCCCccCCCC-cH---HHHHHHHHH
Confidence 4568899999999999777766654 2 37889999874 22222222 2344555553 22 1111111
Q ss_pred --HHHHHhCCCC-C-------CCcccccchhhhccCCEEEEeCcccHHHHH
Q psy4895 324 --RDVLAKHNVP-C-------QHQARQVIEEDFGKFDYLFVMDESNFANVK 364 (430)
Q Consensus 324 --~~~L~e~Gid-~-------~~~~~~l~~~d~~~~D~Vi~m~~~~~~~l~ 364 (430)
.+.-.+.||= | ...|.++- +-...||+|||.++.-.+.+.
T Consensus 75 kd~~lY~~NGiL~MLdRNr~iK~~PERfQ-~~~~~fDvIiTcEERvfD~Vv 124 (198)
T 3p9y_A 75 KDKEFYTQNGLLHMLDRNRRIKKCPERFQ-DTKEQFDIIVTVEERVYDLVV 124 (198)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHCSSCCBGG-GCCCCCSEEEESSHHHHHHHH
T ss_pred hhHHHHHHcCcHHHHhcCccccCCccchh-ccCCCcCEEEEeechhHHHHH
Confidence 1122344541 1 12233332 223469999999987777654
No 40
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=62.19 E-value=3.8 Score=32.89 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=27.5
Q ss_pred CCCcccccccccccceEEEeecCCCCCChhHHHHHHHHHHhccc
Q psy4895 235 SPNQMLNRSTRAGKKAVLFVCLGNICRSPMAACVFKYLINARNQ 278 (430)
Q Consensus 235 ~~~~~l~r~~R~s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~ 278 (430)
..|+.+.+.. +.+|+++|.+..+-|.|++.-+++.+++.|+
T Consensus 8 ~~~~~~~~~~---~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi 48 (110)
T 3czc_A 8 TGGQQMGRGS---MVKVLTACGNGMGSSMVIKMKVENALRQLGV 48 (110)
T ss_dssp -------------CEEEEEECCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccccccC---CcEEEEECCCcHHHHHHHHHHHHHHHHHcCC
Confidence 3555555553 5789999999999999999889998887654
No 41
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=62.18 E-value=3.8 Score=36.84 Aligned_cols=29 Identities=3% Similarity=-0.023 Sum_probs=24.6
Q ss_pred CCceeeccCCcChHHHHHHHHHHhhcccc
Q psy4895 17 PPTVYYIPDFITREEESHLLNKIYSHNLL 45 (430)
Q Consensus 17 p~~~~yip~fi~~~ee~~ll~~i~~~~~~ 45 (430)
....||+|+||+.+|+..|++++.....+
T Consensus 9 ~~~~~~~~~~l~~~~a~~l~~~l~~~~~w 37 (204)
T 3s57_A 9 EGLDSSYTVLFGKAEADEIFQELEKEVEY 37 (204)
T ss_dssp TTEEEEEEECSCHHHHHHHHHHHHHHCCC
T ss_pred CCceEEecCcCCHHHHHHHHHHHHHhCCC
Confidence 34579999999999999999999885553
No 42
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=52.94 E-value=8 Score=37.00 Aligned_cols=48 Identities=13% Similarity=0.214 Sum_probs=31.0
Q ss_pred ceeeccCCcChHHHHHHHHHHhhcccccCCCCccccccccccCCCceEEeCCCCCHHHHHHHHHHHhcC
Q psy4895 19 TVYYIPDFITREEESHLLNKIYSHNLLMTGNNVNVEKYVIKKAPPTVYYIPDFITREEESHLLNKIYSV 87 (430)
Q Consensus 19 ~~~yip~fi~~~ee~~ll~~i~~~~~~~~~~~~~l~~~~~~~lp~Gl~~ipdfls~~ee~~Ll~~l~~~ 87 (430)
..|+-.+-+++++-++|+++ |.- .|+.+++|++|++|-+.|.++++..
T Consensus 17 ~~~~~~~~l~~~qve~~~~~-----------------fE~----eGYLvlk~vFs~eEv~~l~~el~~~ 64 (344)
T 3nnf_A 17 NLYFQSNAMNREQVEQLKQE-----------------YEE----KGYCQIKKIFDFSAIKTIQKTLDQA 64 (344)
T ss_dssp --------CCSHHHHHHHHH-----------------HHH----HSEEEETTCSCHHHHHHHHHHHHHH
T ss_pred ceeeccCcCCHHHHHHHHhh-----------------hcc----CceEEEcCCCCHHHHHHHHHHHHHH
Confidence 45666666777665566555 222 4999999999999999999998764
No 43
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=51.16 E-value=14 Score=29.66 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=26.7
Q ss_pred ccceEEEeecCCCCCChhHHHHHHHHHHhccc
Q psy4895 247 GKKAVLFVCLGNICRSPMAACVFKYLINARNQ 278 (430)
Q Consensus 247 s~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~ 278 (430)
...+|+++|..+.+-|.|++.=+++.+++.|.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi 51 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNI 51 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCC
Confidence 35789999999999999977778888876654
No 44
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=46.69 E-value=13 Score=30.49 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=27.0
Q ss_pred cceEEEeecCCCCCChhHHHHHHHHHHhccc
Q psy4895 248 KKAVLFVCLGNICRSPMAACVFKYLINARNQ 278 (430)
Q Consensus 248 ~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~ 278 (430)
+.+|+++|..+.+-|.|++.-+++.+++.|.
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999998888888876654
No 45
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=42.32 E-value=26 Score=27.76 Aligned_cols=30 Identities=10% Similarity=0.136 Sum_probs=24.7
Q ss_pred cceEEEeecCCCCCChhHHHHHHHHHHhccc
Q psy4895 248 KKAVLFVCLGNICRSPMAACVFKYLINARNQ 278 (430)
Q Consensus 248 ~t~~lf~c~~N~~RS~mAea~~~~~~~~~~~ 278 (430)
+.+|+.+|.+...-|.|++ =+++.+.++|+
T Consensus 3 mkkIll~Cg~G~sTS~l~~-k~~~~~~~~gi 32 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVS-KMRAQAEKYEV 32 (106)
T ss_dssp CEEEEEECSSSTTTHHHHH-HHHHHHHHSCC
T ss_pred CcEEEEECCCchhHHHHHH-HHHHHHHHCCC
Confidence 4689999999999998888 56677777665
No 46
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=35.02 E-value=42 Score=26.44 Aligned_cols=28 Identities=21% Similarity=0.351 Sum_probs=22.2
Q ss_pred eEEEeecCCCCCChhHHHHHHHHHHhccc
Q psy4895 250 AVLFVCLGNICRSPMAACVFKYLINARNQ 278 (430)
Q Consensus 250 ~~lf~c~~N~~RS~mAea~~~~~~~~~~~ 278 (430)
+|+++|.+..+-| |...=+++.++++|.
T Consensus 6 kIlvvC~~G~~TS-ll~~kl~~~~~~~gi 33 (109)
T 2l2q_A 6 NILLVCGAGMSTS-MLVQRIEKYAKSKNI 33 (109)
T ss_dssp EEEEESSSSCSSC-HHHHHHHHHHHHHTC
T ss_pred EEEEECCChHhHH-HHHHHHHHHHHHCCC
Confidence 5999999999999 555567777776654
No 47
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=34.94 E-value=43 Score=21.18 Aligned_cols=30 Identities=17% Similarity=0.261 Sum_probs=21.9
Q ss_pred CCHHHHHHHHhCCCCCCC-----cccccchhhhcc
Q psy4895 319 ADSRARDVLAKHNVPCQH-----QARQVIEEDFGK 348 (430)
Q Consensus 319 ~~~~a~~~L~e~Gid~~~-----~~~~l~~~d~~~ 348 (430)
+.|.+.+.++++|||++. ..-.++.+|+..
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~ 36 (40)
T 2eq7_C 2 AMPAAERLMQEKGVSPAEVQGTGLGGRILKEDVMR 36 (40)
T ss_dssp CCHHHHHHHHHTTCCTTTSCCCSSSSCCCHHHHTT
T ss_pred CCcHHHHHHHHhCCChhhcCCCCCCCcccHHHHHH
Confidence 368899999999999852 233677777654
No 48
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=33.83 E-value=29 Score=33.23 Aligned_cols=29 Identities=14% Similarity=0.047 Sum_probs=25.4
Q ss_pred eEEEEeCCCeEEEecchhhccccccccCC
Q psy4895 191 VCSIFVDARSLLILQDDMYEKYVHGISSK 219 (430)
Q Consensus 191 ~~~l~L~~gSlliMsG~aR~~w~H~I~~~ 219 (430)
.+.|.-.+|+++|.-|+.=..|+.|.-+.
T Consensus 239 Wi~V~p~pgalvVNiGD~l~~~TnG~~kS 267 (331)
T 1odm_A 239 YQDIEADDTGYLINCGSYMAHLTNNYYKA 267 (331)
T ss_dssp EEECCCCTTSEEEEECHHHHHHTTTSSCC
T ss_pred eEECCCCCCeEEEEccHHHHHHhCCEeeC
Confidence 77888889999999999999998887664
No 49
>1m2d_A [2Fe-2S] ferredoxin; thioredoxin-like fold, [2Fe-2S] cluster, Cys59Ser variant, electron transport; 1.05A {Aquifex aeolicus} SCOP: c.47.1.11 PDB: 1m2a_A 1f37_A 1m2b_A
Probab=27.35 E-value=51 Score=25.98 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=25.0
Q ss_pred cceEEEeecC--------CCCCChhHHHHHHHHHHhc----cccccceec
Q psy4895 248 KKAVLFVCLG--------NICRSPMAACVFKYLINAR----NQADRWTVD 285 (430)
Q Consensus 248 ~t~~lf~c~~--------N~~RS~mAea~~~~~~~~~----~~~~~~~~~ 285 (430)
....++||++ .+|.+.=|+.++.++-.+. |+.++|++.
T Consensus 2 ~~~~I~VC~~~r~~~~~~~~C~~~Ga~~l~~~l~~~l~~~~g~~~~v~v~ 51 (110)
T 1m2d_A 2 EFKHVFVCVQDRPPGHPQGSCAQRGSREVFQAFMEKIQTDPQLFMTTVIT 51 (110)
T ss_dssp -CEEEEEECCCCCTTCTTCCTGGGTHHHHHHHHHHHHHHCHHHHTTEEEE
T ss_pred CceEEEECCCCCCCCCCCCCchhcCHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 3567999999 6888776788877775432 333445553
No 50
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=25.74 E-value=2.6e+02 Score=26.14 Aligned_cols=72 Identities=22% Similarity=0.224 Sum_probs=47.7
Q ss_pred CceEEEeeecC------CCCCCCCCCCCCCCCceEEEcCCC-ceEEEEecCCCCCCCCeeEEEEeCCCeEEEecchhhcc
Q psy4895 139 PNHVLINEYLA------GQGIMPHFDGPLYYPTISTISCGS-HTILNFYEPDRTSEGSEVCSIFVDARSLLILQDDMYEK 211 (430)
Q Consensus 139 pn~~lvN~Y~~------G~~I~~H~D~~~~~~~Ia~lSLgs-~~~m~f~~~~~~~~~~~~~~l~L~~gSlliMsG~aR~~ 211 (430)
...+-+|.|.+ +-++++|.|.. .|..| +.. ..=+....++ ..-+.|.-.+|+++|.-|+.=..
T Consensus 168 ~~~lr~~~Ypp~~~~~~~~g~~~HtD~g----~lTlL-~qd~v~GLqV~~~~-----g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 168 NSVLRLLHYPPIPKDATGVRAGAHGDIN----TITLL-LGAEEGGLEVLDRD-----GQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp CCEEEEEEECCCSSCCC--CEEEECCCS----SEEEE-ECCTTSCEEEECTT-----SCEEECCCCSSCEEEEECHHHHH
T ss_pred cceeeeEecCCCCCCcCCcCccceecCc----eEEEE-eEcCcCceEEECCC-----CcEEECCCCCCeEEEEhHHHHHH
Confidence 34677899986 23788999963 13333 222 1223333333 46888888899999999999999
Q ss_pred ccccccCCC
Q psy4895 212 YVHGISSKT 220 (430)
Q Consensus 212 w~H~I~~~~ 220 (430)
|+.|.-+..
T Consensus 238 ~TnG~~kS~ 246 (312)
T 3oox_A 238 LTNNVLPST 246 (312)
T ss_dssp HTTTSSCCC
T ss_pred HhCCeecCC
Confidence 988876643
No 51
>2auv_A Potential NAD-reducing hydrogenase subunit; thioredoxin, thiordoxin-like, oxidoreductase; NMR {Desulfovibrio fructosovorans}
Probab=24.84 E-value=32 Score=25.71 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=23.8
Q ss_pred ceEEEeecCCCCCChhHHHHHHHHHHhcc
Q psy4895 249 KAVLFVCLGNICRSPMAACVFKYLINARN 277 (430)
Q Consensus 249 t~~lf~c~~N~~RS~mAea~~~~~~~~~~ 277 (430)
+...+||++.+|.+.=|+.+++++-.+.+
T Consensus 6 ~~~I~VC~g~~C~~~Ga~~v~~~l~~~l~ 34 (85)
T 2auv_A 6 KYPISVCMGTACFVKGADKVVHAFKEQLK 34 (85)
T ss_dssp SBCEECCCCHHHHTTTHHHHHHHHHHHHC
T ss_pred CEEEEECCCchHHHcCHHHHHHHHHHHhC
Confidence 34689999999999989999988876543
No 52
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=21.08 E-value=1.3e+02 Score=28.96 Aligned_cols=77 Identities=17% Similarity=0.107 Sum_probs=47.1
Q ss_pred eEEEeecCCCCCChhHHHHHHHHHHhccccccceeccCCCCCcccccccCCCceEEeecccCCCCCCCCCCHHHHHHHHh
Q psy4895 250 AVLFVCLGNICRSPMAACVFKYLINARNQADRWTVDSAGTGDWHVQHVNQADRWTVDSAGTGDWHVGHPADSRARDVLAK 329 (430)
Q Consensus 250 ~~lf~c~~N~~RS~mAea~~~~~~~~~~~~~~~~~~sag~~~~~~~~~~~~~~~~v~SAGt~p~~~g~~~~~~a~~~L~e 329 (430)
.||.- |.|-.|.+++++...+ | ..+.|.-.-|.|+..| ..+...|.+
T Consensus 144 ~ILTh-----~~S~tvl~~l~~A~~~-g-----------------------k~~~V~v~EtRP~~qG----rltA~eL~~ 190 (338)
T 3a11_A 144 VIMTH-----CHSKAAISVMKTAWEQ-G-----------------------KDIKVIVTETRPKWQG----KITAKELAS 190 (338)
T ss_dssp EEEEC-----SCCHHHHHHHHHHHHT-T-----------------------CCCEEEEECCTTTTHH----HHHHHHHHH
T ss_pred EEEEe-----CCcHHHHHHHHHHHHC-C-----------------------CeEEEEEeCCCCchhh----HHHHHHHHh
Confidence 45654 5557788888876642 2 1355556667886555 677889999
Q ss_pred CCCCCCCcccccchhhhccCCEEEEeCccc
Q psy4895 330 HNVPCQHQARQVIEEDFGKFDYLFVMDESN 359 (430)
Q Consensus 330 ~Gid~~~~~~~l~~~d~~~~D~Vi~m~~~~ 359 (430)
.||+..-.+-.--...+.+.|.||+=.+..
T Consensus 191 ~GI~vtlI~Dsa~~~~M~~Vd~VivGAd~V 220 (338)
T 3a11_A 191 YGIPVIYVVDSAARHYMKMTDKVVMGADSI 220 (338)
T ss_dssp TTCCEEEECGGGTTTTGGGCSEEEECCSEE
T ss_pred CCCCEEEEehHHHHHHHHhCCEEEECccEE
Confidence 999964211111112236788888765543
No 53
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=20.59 E-value=1.6e+02 Score=27.89 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=46.5
Q ss_pred eEEEeeecC------CCCCCCCCCCCCCCCceEEEcCC--CceEEEEecCCCCCCCCeeEEEEeCCCeEEEecchhhccc
Q psy4895 141 HVLINEYLA------GQGIMPHFDGPLYYPTISTISCG--SHTILNFYEPDRTSEGSEVCSIFVDARSLLILQDDMYEKY 212 (430)
Q Consensus 141 ~~lvN~Y~~------G~~I~~H~D~~~~~~~Ia~lSLg--s~~~m~f~~~~~~~~~~~~~~l~L~~gSlliMsG~aR~~w 212 (430)
.+-+|+|.+ ..++++|.|.. .|..| +. ...=+...+ + ..-+.|.-.+|+++|.-|+.=..|
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g----~lTlL-~qd~~v~GLQV~~-~-----g~Wi~V~p~pgalvVNiGD~l~~~ 224 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG----GIILL-FQDDKVSGLQLLK-D-----GQWIDVPPMRHSIVVNLGDQLEVI 224 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS----SEEEE-EESSSCCCEEEEE-T-----TEEEECCCCTTCEEEEECHHHHHH
T ss_pred eeEEEecCCCcccccccccccccCCC----ceEEE-EecCCCCeeeEee-C-----CeEEEcccCCCcEEEEhHHHHHHH
Confidence 567899986 23899999963 12222 21 011122222 2 468888888999999999999999
Q ss_pred cccccCCC
Q psy4895 213 VHGISSKT 220 (430)
Q Consensus 213 ~H~I~~~~ 220 (430)
+.|.-+..
T Consensus 225 SnG~~kS~ 232 (319)
T 1w9y_A 225 TNGKYKSV 232 (319)
T ss_dssp TTTSSCCC
T ss_pred hCCeeecc
Confidence 88876643
No 54
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=20.37 E-value=43 Score=21.19 Aligned_cols=29 Identities=24% Similarity=0.234 Sum_probs=20.6
Q ss_pred CCHHHHHHHHhCCCCCC-----Ccccccchhhhc
Q psy4895 319 ADSRARDVLAKHNVPCQ-----HQARQVIEEDFG 347 (430)
Q Consensus 319 ~~~~a~~~L~e~Gid~~-----~~~~~l~~~d~~ 347 (430)
+.|.+.+.++++|||++ ...-.++.+|+.
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~ 35 (40)
T 2eq8_C 2 AAPSIRRLARELGVDLTRLRGTGLAGRITEEDVR 35 (40)
T ss_dssp CCHHHHHHHHHHTCCGGGCCCCSTTSCCCHHHHH
T ss_pred CChHHHHHHHHhCCChhhcCCCCCCCceeHHHHH
Confidence 36889999999999975 223356666654
No 55
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=20.31 E-value=46 Score=21.14 Aligned_cols=29 Identities=24% Similarity=0.256 Sum_probs=20.5
Q ss_pred CCHHHHHHHHhCCCCCC-----Ccccccchhhhc
Q psy4895 319 ADSRARDVLAKHNVPCQ-----HQARQVIEEDFG 347 (430)
Q Consensus 319 ~~~~a~~~L~e~Gid~~-----~~~~~l~~~d~~ 347 (430)
+.|.+.+.++++|+|++ ...-.++.+|+.
T Consensus 3 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~ 36 (41)
T 2eq9_C 3 AVPAARKLARELGIPIEEVPGSGPLGRVRVEDVR 36 (41)
T ss_dssp BCHHHHHHHHHTTCCGGGSCCCSTTCCBCHHHHH
T ss_pred CChHHHHHHHHcCCChhhcCCCCCCCcccHHHHH
Confidence 36889999999999975 123356666654
Done!