Query psy4897
Match_columns 774
No_of_seqs 541 out of 2099
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 20:33:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4897.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4897hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z87_A Alpha-1-syntrophin; pro 100.0 2.2E-31 7.4E-36 280.1 24.9 248 107-358 7-262 (263)
2 3gsl_A Disks large homolog 4; 99.9 7.3E-25 2.5E-29 218.4 24.8 179 19-262 4-192 (196)
3 3r0h_A INAD, inactivation-NO-a 99.9 2.5E-24 8.4E-29 217.3 25.3 181 16-263 14-199 (206)
4 2qt5_A Glutamate receptor-inte 99.9 1.8E-23 6.3E-28 210.5 24.1 188 19-262 6-197 (200)
5 1p1d_A PDZ45, glutamate recept 99.9 5E-22 1.7E-26 199.7 23.3 183 19-260 5-195 (196)
6 2xkx_A Disks large homolog 4; 99.9 2.4E-21 8.2E-26 230.7 22.8 181 17-262 56-246 (721)
7 2adz_A Alpha-1-syntrophin; pro 99.9 3.6E-22 1.2E-26 196.2 11.7 165 105-358 5-177 (178)
8 2xkx_A Disks large homolog 4; 99.8 2.4E-19 8.1E-24 213.5 25.8 237 21-265 155-396 (721)
9 1w9e_A Syntenin 1; cell adhesi 99.8 2.5E-18 8.4E-23 168.4 23.8 160 19-257 3-163 (166)
10 3suz_A Amyloid beta A4 precurs 99.8 7.7E-21 2.6E-25 210.9 5.4 168 16-258 200-372 (388)
11 3rle_A Golgi reassembly-stacki 99.7 5.8E-17 2E-21 164.9 16.7 162 33-260 3-170 (209)
12 4a8c_A Periplasmic PH-dependen 99.6 2.9E-15 9.8E-20 168.6 19.9 156 45-262 262-422 (436)
13 3pv2_A DEGQ; trypsin fold, PDZ 99.6 4.9E-15 1.7E-19 167.4 16.1 159 46-261 282-444 (451)
14 1qav_A Alpha-1 syntrophin (res 99.6 1.4E-14 4.7E-19 127.3 11.6 86 19-104 3-88 (90)
15 1r6j_A Syntenin 1; PDZ, membra 99.6 1.7E-14 5.9E-19 125.6 11.2 77 20-104 4-80 (82)
16 2dc2_A GOPC, golgi associated 99.5 2.3E-14 7.8E-19 129.5 11.2 88 19-106 8-95 (103)
17 4e34_A Golgi-associated PDZ an 99.5 2.7E-14 9.2E-19 124.5 11.2 85 20-104 2-86 (87)
18 2iwo_A Multiple PDZ domain pro 99.5 1.5E-14 5.1E-19 134.6 10.0 92 15-106 19-113 (120)
19 2fe5_A Presynaptic protein SAP 99.5 8.6E-14 3E-18 122.9 13.0 88 18-106 1-93 (94)
20 3b76_A E3 ubiquitin-protein li 99.5 4E-14 1.4E-18 131.5 11.3 91 16-106 20-113 (118)
21 4amh_A Disks large homolog 1; 99.5 7.7E-14 2.6E-18 126.8 12.9 84 24-107 5-93 (106)
22 3cbz_A Dishevelled-2; PDZ doma 99.5 2.9E-14 1E-18 130.0 10.0 89 18-106 3-96 (108)
23 2awx_A Synapse associated prot 99.5 7.9E-14 2.7E-18 126.2 12.7 87 19-106 2-93 (105)
24 2q3g_A PDZ and LIM domain prot 99.5 6.4E-14 2.2E-18 122.8 11.4 85 21-106 2-86 (89)
25 1ihj_A INAD; intermolecular di 99.5 7.6E-14 2.6E-18 124.4 11.8 88 19-106 4-97 (98)
26 2qg1_A Multiple PDZ domain pro 99.5 1.4E-13 4.8E-18 121.2 12.8 87 19-106 3-89 (92)
27 2uzc_A Human pdlim5, PDZ and L 99.5 9.9E-14 3.4E-18 121.2 11.6 84 20-106 3-86 (88)
28 2vwr_A Ligand of NUMB protein 99.5 1.4E-13 4.7E-18 122.1 12.6 87 19-106 2-89 (95)
29 1uhp_A Hypothetical protein KI 99.5 1.1E-13 3.8E-18 125.6 12.0 89 18-107 6-102 (107)
30 2d92_A INAD-like protein; PDZ 99.5 1.5E-13 5.1E-18 125.1 12.6 90 16-106 11-105 (108)
31 2dkr_A LIN-7 homolog B; LIN-7B 99.5 1.5E-13 5.1E-18 121.1 12.1 88 18-106 3-90 (93)
32 2jik_A Synaptojanin-2 binding 99.5 1.9E-13 6.4E-18 122.6 12.9 86 20-106 7-97 (101)
33 2i1n_A Discs, large homolog 3; 99.5 2.1E-13 7.2E-18 122.5 13.0 86 20-106 4-94 (102)
34 2pa1_A PDZ and LIM domain prot 99.5 1.4E-13 4.7E-18 120.1 11.4 84 22-106 2-85 (87)
35 1v62_A KIAA1719 protein; struc 99.5 1.7E-13 5.9E-18 126.6 12.7 93 14-106 9-102 (117)
36 2ehr_A INAD-like protein; PDZ 99.5 1.4E-13 4.8E-18 126.9 11.7 91 16-106 11-110 (117)
37 2byg_A Channel associated prot 99.5 1.6E-13 5.4E-18 127.1 11.7 90 16-106 20-114 (117)
38 3gge_A PDZ domain-containing p 99.5 2.3E-13 8E-18 121.3 12.1 83 20-105 5-89 (95)
39 2q9v_A Membrane-associated gua 99.5 2.1E-13 7.3E-18 119.5 11.8 84 21-105 3-88 (90)
40 3hpk_A Protein interacting wit 99.5 2.7E-13 9.2E-18 126.5 13.2 85 21-105 20-104 (125)
41 2pkt_A PDZ and LIM domain prot 99.5 2.4E-13 8.1E-18 119.6 12.1 85 21-106 2-86 (91)
42 1d5g_A Human phosphatase HPTP1 99.5 3.6E-13 1.2E-17 119.5 13.3 88 18-106 3-93 (96)
43 3nfk_A Tyrosine-protein phosph 99.5 1.3E-13 4.5E-18 124.9 10.4 89 16-104 13-106 (107)
44 2r4h_A Membrane-associated gua 99.5 2.8E-13 9.7E-18 124.2 12.6 91 15-106 19-109 (112)
45 1uep_A Membrane associated gua 99.5 1.1E-13 3.7E-18 124.9 9.7 86 20-106 9-96 (103)
46 2fne_A Multiple PDZ domain pro 99.5 1.1E-13 3.6E-18 128.3 9.7 95 11-106 16-113 (117)
47 1n7e_A AMPA receptor interacti 99.5 4.2E-13 1.5E-17 119.5 13.1 87 19-106 4-90 (97)
48 2eno_A Synaptojanin-2-binding 99.5 3E-13 1E-17 125.3 12.4 90 16-106 13-107 (120)
49 1ufx_A KIAA1526 protein; PDZ d 99.5 2E-13 6.9E-18 123.6 11.0 85 21-106 7-97 (103)
50 1wi2_A Riken cDNA 2700099C19; 99.5 4.5E-13 1.5E-17 121.0 13.1 88 17-106 12-99 (104)
51 1kwa_A Hcask/LIN-2 protein; PD 99.5 3.2E-13 1.1E-17 118.6 11.8 85 20-106 1-85 (88)
52 2i04_A Membrane-associated gua 99.5 4.8E-13 1.7E-17 116.0 12.8 82 22-104 2-85 (85)
53 2ego_A General receptor for ph 99.5 3.6E-13 1.2E-17 119.8 12.2 86 18-104 2-94 (96)
54 2jil_A GRIP1 protein, glutamat 99.5 3.1E-13 1.1E-17 120.1 11.8 86 20-106 3-92 (97)
55 3o46_A Maguk P55 subfamily mem 99.5 5E-13 1.7E-17 118.1 12.9 87 18-106 2-88 (93)
56 1m5z_A GRIP, AMPA receptor int 99.5 5.5E-13 1.9E-17 117.1 13.0 86 18-105 4-90 (91)
57 1wi4_A Synip, syntaxin binding 99.5 3.8E-13 1.3E-17 123.0 12.3 89 16-106 11-105 (109)
58 1rgw_A ZAsp protein; PDZ, cyph 99.5 1.8E-13 6E-18 118.7 9.5 81 22-105 3-83 (85)
59 2db5_A INAD-like protein; PDZ 99.5 1.9E-13 6.4E-18 128.2 10.4 91 16-106 21-115 (128)
60 1ujd_A KIAA0559 protein; PDZ d 99.5 1.8E-13 6.2E-18 126.4 10.1 88 19-106 11-109 (117)
61 3l4f_D SH3 and multiple ankyri 99.5 3.3E-13 1.1E-17 127.7 12.0 88 18-106 25-124 (132)
62 2o2t_A Multiple PDZ domain pro 99.5 1.7E-13 5.9E-18 126.2 9.8 90 17-106 17-110 (117)
63 1i16_A Interleukin 16, LCF; cy 99.5 1.3E-13 4.4E-18 130.0 9.1 88 18-106 27-118 (130)
64 3axa_A Afadin, nectin-3, prote 99.4 5.3E-13 1.8E-17 120.8 12.5 87 18-106 9-98 (106)
65 2cs5_A Tyrosine-protein phosph 99.4 1.8E-13 6E-18 126.6 9.4 91 16-106 11-106 (119)
66 1x6d_A Interleukin-16; PDZ dom 99.4 4.2E-13 1.4E-17 124.1 11.6 94 13-106 8-103 (119)
67 2w4f_A Protein LAP4; structura 99.4 7.9E-13 2.7E-17 117.4 12.9 85 20-106 3-93 (97)
68 2jre_A C60-1 PDZ domain peptid 99.4 8.3E-13 2.8E-17 119.8 12.7 90 17-106 9-104 (108)
69 2v90_A PDZ domain-containing p 99.4 6.6E-13 2.2E-17 117.9 11.8 86 19-106 2-89 (96)
70 2csj_A TJP2 protein; PDZ domai 99.4 3.3E-13 1.1E-17 124.5 10.1 88 17-106 11-104 (117)
71 2opg_A Multiple PDZ domain pro 99.4 1.4E-12 4.7E-17 116.1 13.8 86 20-106 4-90 (98)
72 1q3o_A Shank1; PDZ, GKAP, pept 99.4 1.2E-12 4.2E-17 119.1 13.1 85 21-106 8-104 (109)
73 2eeg_A PDZ and LIM domain prot 99.4 4.1E-13 1.4E-17 119.0 9.6 84 20-106 8-91 (94)
74 1wfg_A Regulating synaptic mem 99.4 7.7E-13 2.6E-17 124.9 12.0 88 20-107 27-128 (131)
75 1mfg_A ERB-B2 interacting prot 99.4 1.1E-12 3.7E-17 116.2 12.3 81 24-106 5-93 (95)
76 2he4_A Na(+)/H(+) exchange reg 99.4 1.3E-12 4.5E-17 114.5 12.7 85 19-106 3-87 (90)
77 3egg_C Spinophilin; PP1, serin 99.4 7.9E-13 2.7E-17 130.5 12.6 87 18-105 78-170 (170)
78 1wf7_A Enigma homologue protei 99.4 3.8E-13 1.3E-17 121.3 9.4 86 18-106 3-88 (103)
79 2la8_A Inactivation-NO-after-p 99.4 4E-13 1.4E-17 122.3 9.6 84 20-106 2-85 (106)
80 2h2b_A Tight junction protein 99.4 9.2E-13 3.1E-17 119.3 11.9 86 19-106 6-97 (107)
81 2qkv_A Inactivation-NO-after-p 99.4 8.1E-13 2.8E-17 117.7 11.4 87 17-106 5-91 (96)
82 1wha_A KIAA0147 protein, scrib 99.4 5E-13 1.7E-17 120.9 10.1 89 17-106 4-98 (105)
83 2edp_A Fragment, shroom family 99.4 3.2E-13 1.1E-17 121.3 8.6 89 17-106 6-94 (100)
84 1ueq_A Membrane associated gua 99.4 1.2E-12 4E-17 122.1 12.7 87 19-106 18-106 (123)
85 1um1_A KIAA1849 protein, RSGI 99.4 1.3E-12 4.4E-17 119.0 12.7 89 17-106 5-96 (110)
86 3i4w_A Disks large homolog 4; 99.4 1.4E-12 4.8E-17 117.2 12.8 87 18-106 9-95 (104)
87 2daz_A INAD-like protein; PDZ 99.4 1.1E-12 3.6E-17 122.4 12.3 88 18-106 23-111 (124)
88 1wf8_A Neurabin-I; PDZ domain, 99.4 9.9E-13 3.4E-17 119.3 11.7 87 19-106 8-100 (107)
89 1wg6_A Hypothetical protein (r 99.4 2.8E-13 9.5E-18 127.2 8.1 85 22-106 27-122 (127)
90 1uju_A Scribble; PDZ domain, c 99.4 1.7E-13 6E-18 125.1 6.5 87 20-106 9-104 (111)
91 2djt_A Unnamed protein product 99.4 1E-12 3.5E-17 118.4 11.5 89 17-106 8-98 (104)
92 2dmz_A INAD-like protein; PDZ 99.4 7.8E-13 2.7E-17 124.0 11.1 91 16-106 11-106 (129)
93 1r6j_A Syntenin 1; PDZ, membra 99.4 1.4E-12 4.6E-17 113.6 11.7 77 174-258 4-80 (82)
94 1v6b_A Harmonin isoform A1; st 99.4 1E-12 3.4E-17 121.8 11.3 86 19-106 17-107 (118)
95 1x5q_A LAP4 protein; PDZ domai 99.4 2.4E-12 8.4E-17 117.2 13.8 87 18-106 13-105 (110)
96 2yt7_A Amyloid beta A4 precurs 99.4 1.7E-12 5.9E-17 116.7 12.5 90 16-105 5-98 (101)
97 2ejy_A 55 kDa erythrocyte memb 99.4 1.4E-12 4.8E-17 117.0 11.8 82 21-104 13-94 (97)
98 1vb7_A PDZ and LIM domain 2; P 99.4 3.4E-13 1.2E-17 119.5 7.5 86 20-106 4-89 (94)
99 2kpk_A Membrane-associated gua 99.4 1.2E-12 4E-17 123.1 11.5 87 19-106 17-105 (129)
100 1uew_A Membrane associated gua 99.4 1.5E-12 5E-17 119.6 11.6 88 18-106 8-103 (114)
101 1nf3_C PAR-6B; semi-CRIB motif 99.4 7E-13 2.4E-17 124.5 9.6 92 15-106 24-125 (128)
102 1z87_A Alpha-1-syntrophin; pro 99.4 2.8E-13 9.5E-18 142.4 7.6 87 20-106 77-163 (263)
103 1ky9_A Protease DO, DEGP, HTRA 99.4 3.5E-14 1.2E-18 160.3 0.4 154 46-261 286-441 (448)
104 1q7x_A PDZ2B domain of PTP-BAS 99.4 1.5E-12 5E-17 118.3 11.0 89 17-106 6-102 (108)
105 2eeh_A PDZ domain-containing p 99.4 1.6E-12 5.6E-17 116.4 11.1 87 18-106 8-94 (100)
106 1g9o_A NHE-RF; PDZ domain, com 99.4 3.9E-12 1.3E-16 111.7 12.9 83 20-105 3-85 (91)
107 2gzv_A PRKCA-binding protein; 99.4 3.6E-12 1.2E-16 117.4 13.1 91 14-104 18-108 (114)
108 3qe1_A Sorting nexin-27, G pro 99.4 3.9E-12 1.3E-16 115.2 13.1 86 19-106 5-102 (107)
109 2fcf_A Multiple PDZ domain pro 99.4 2.7E-12 9.4E-17 115.3 11.9 89 18-106 2-99 (103)
110 2g5m_B Neurabin-2; spinophilin 99.4 1.1E-12 3.6E-17 120.2 8.7 86 20-106 4-95 (113)
111 1va8_A Maguk P55 subfamily mem 99.4 4E-12 1.4E-16 116.7 12.6 85 18-106 23-108 (113)
112 2e7k_A Maguk P55 subfamily mem 99.4 1.2E-12 3.9E-17 115.7 8.5 84 18-105 4-87 (91)
113 1n7t_A 99-MER peptide of densi 99.4 1.9E-12 6.4E-17 116.6 9.8 83 20-106 11-101 (103)
114 1qav_A Alpha-1 syntrophin (res 99.4 2.8E-12 9.7E-17 112.4 10.7 86 174-259 4-89 (90)
115 2edz_A PDZ domain-containing p 99.4 3E-12 1E-16 117.5 11.2 90 15-106 8-97 (114)
116 2f5y_A Regulator of G-protein 99.4 4.9E-12 1.7E-16 111.3 12.1 82 19-106 2-83 (91)
117 3ngh_A PDZ domain-containing p 99.3 3.4E-12 1.2E-16 115.3 11.1 84 21-106 2-85 (106)
118 1wfv_A Membrane associated gua 99.3 9.4E-13 3.2E-17 118.2 7.2 87 19-106 10-96 (103)
119 3e17_A Tight junction protein 99.3 4.7E-12 1.6E-16 111.1 11.4 79 22-106 2-81 (88)
120 2dlu_A INAD-like protein; PDZ 99.3 5.6E-12 1.9E-16 115.0 12.4 86 18-106 13-98 (111)
121 2ehr_A INAD-like protein; PDZ 99.3 7.2E-12 2.5E-16 115.4 13.0 93 171-263 12-113 (117)
122 2iwn_A Multiple PDZ domain pro 99.3 7E-12 2.4E-16 110.8 12.2 85 21-106 5-93 (97)
123 3k1r_A Harmonin; protein-prote 99.3 2.5E-12 8.4E-17 129.0 10.4 87 18-106 82-168 (192)
124 2dm8_A INAD-like protein; PDZ 99.3 3.5E-12 1.2E-16 117.1 10.5 90 16-106 13-103 (116)
125 2vsp_A PDZ domain-containing p 99.3 1.6E-12 5.5E-17 114.3 7.9 84 20-106 3-86 (91)
126 3r68_A Na(+)/H(+) exchange reg 99.3 5.3E-12 1.8E-16 111.6 11.3 85 19-106 4-88 (95)
127 2dc2_A GOPC, golgi associated 99.3 4.2E-12 1.5E-16 114.6 10.7 91 174-264 9-99 (103)
128 4e34_A Golgi-associated PDZ an 99.3 5.6E-12 1.9E-16 109.7 10.5 85 174-258 2-86 (87)
129 2lob_A Golgi-associated PDZ an 99.0 1.3E-13 4.3E-18 126.9 0.0 96 5-103 14-110 (112)
130 3b76_A E3 ubiquitin-protein li 99.3 7.2E-12 2.5E-16 116.2 11.7 88 174-261 24-114 (118)
131 2iwq_A Multiple PDZ domain pro 99.3 6.9E-12 2.4E-16 117.1 11.7 90 17-106 21-119 (123)
132 1tp5_A Presynaptic density pro 99.3 1.1E-11 3.9E-16 114.3 12.6 87 18-106 12-98 (119)
133 2d90_A PDZ domain containing p 99.3 7.3E-12 2.5E-16 112.4 10.9 87 17-106 3-89 (102)
134 3khf_A Microtubule-associated 99.3 5.2E-12 1.8E-16 112.7 9.5 81 24-106 6-93 (99)
135 1wi2_A Riken cDNA 2700099C19; 99.3 2.2E-11 7.6E-16 109.9 13.8 87 173-261 14-100 (104)
136 2koj_A Partitioning defective 99.3 2.4E-11 8E-16 110.7 14.1 86 20-106 11-101 (111)
137 1v5q_A GRIP1 homolog, glutamat 99.3 7E-12 2.4E-16 116.6 10.7 89 18-106 13-107 (122)
138 3sfj_A TAX1-binding protein 3; 99.3 1.2E-11 4E-16 111.3 11.6 83 22-105 6-104 (104)
139 2iwo_A Multiple PDZ domain pro 99.3 4.7E-12 1.6E-16 117.7 9.2 88 174-261 24-114 (120)
140 2eei_A PDZ domain-containing p 99.3 6.1E-12 2.1E-16 113.7 9.7 87 17-106 5-91 (106)
141 3gge_A PDZ domain-containing p 99.3 2.4E-11 8.3E-16 108.3 13.0 85 172-259 3-89 (95)
142 1um7_A Synapse-associated prot 99.3 5E-12 1.7E-16 115.3 8.9 89 16-106 11-99 (113)
143 3cbz_A Dishevelled-2; PDZ doma 99.3 7.7E-12 2.6E-16 113.9 10.0 88 174-261 5-97 (108)
144 3hpk_A Protein interacting wit 99.3 1.4E-11 4.9E-16 114.8 12.0 89 174-262 19-107 (125)
145 2kom_A Partitioning defective 99.3 2.9E-11 9.9E-16 112.4 14.0 79 28-106 37-120 (121)
146 2z17_A Pleckstrin homology SEC 99.3 1.1E-11 3.6E-16 111.9 10.8 82 20-102 15-103 (104)
147 1uez_A KIAA1526 protein; PDZ d 99.3 4E-12 1.4E-16 114.0 7.9 87 18-106 6-93 (101)
148 1i16_A Interleukin 16, LCF; cy 99.3 2E-11 6.9E-16 114.9 13.0 89 172-261 27-119 (130)
149 2dkr_A LIN-7 homolog B; LIN-7B 99.3 1.5E-11 5.3E-16 108.1 11.0 87 174-261 5-91 (93)
150 1x5n_A Harmonin; PDZ domain, u 99.3 1.6E-11 5.5E-16 112.4 11.6 86 18-105 13-98 (114)
151 2q9v_A Membrane-associated gua 99.3 1.8E-11 6.1E-16 107.2 11.3 86 174-260 2-89 (90)
152 2kv8_A RGS12, regulator of G-p 99.3 2.5E-12 8.5E-17 111.1 5.7 80 20-105 2-81 (83)
153 1uhp_A Hypothetical protein KI 99.3 3.7E-11 1.3E-15 108.9 13.5 89 172-261 6-102 (107)
154 1ihj_A INAD; intermolecular di 99.3 1.8E-11 6.2E-16 108.9 11.1 87 174-260 5-97 (98)
155 3bpu_A Membrane-associated gua 99.3 1.6E-11 5.3E-16 107.2 10.5 83 19-106 2-86 (88)
156 1uep_A Membrane associated gua 99.3 1.8E-11 6.2E-16 110.3 10.8 88 173-261 8-97 (103)
157 1wi4_A Synip, syntaxin binding 99.3 3.7E-11 1.3E-15 109.7 12.6 87 173-261 14-106 (109)
158 3nfk_A Tyrosine-protein phosph 99.3 1.5E-11 5.1E-16 111.3 9.8 86 173-258 16-106 (107)
159 2ego_A General receptor for ph 99.3 2.8E-11 9.5E-16 107.5 11.3 84 174-258 4-94 (96)
160 3soe_A Membrane-associated gua 99.3 2.7E-11 9.2E-16 111.6 11.5 83 17-106 9-93 (113)
161 2jik_A Synaptojanin-2 binding 99.3 4.5E-11 1.5E-15 107.0 12.7 87 174-261 7-98 (101)
162 1v5l_A PDZ and LIM domain 3; a 99.3 2.2E-12 7.4E-17 116.3 4.1 80 26-106 9-88 (103)
163 1kwa_A Hcask/LIN-2 protein; PD 99.3 2.8E-11 9.7E-16 106.1 11.1 85 175-261 2-86 (88)
164 1ujd_A KIAA0559 protein; PDZ d 99.3 2.3E-11 7.9E-16 112.3 11.0 90 172-261 10-110 (117)
165 2qg1_A Multiple PDZ domain pro 99.3 4.9E-11 1.7E-15 104.8 12.5 86 174-260 4-89 (92)
166 2pa1_A PDZ and LIM domain prot 99.2 2.9E-11 9.8E-16 105.3 10.7 83 178-261 4-86 (87)
167 1v62_A KIAA1719 protein; struc 99.2 3.1E-11 1.1E-15 111.4 11.4 88 174-261 15-103 (117)
168 2i1n_A Discs, large homolog 3; 99.2 6.4E-11 2.2E-15 106.2 13.0 88 174-262 4-96 (102)
169 2dls_A PDZ-rhogef, RHO guanine 99.2 4.3E-11 1.5E-15 105.8 11.6 81 19-106 7-87 (93)
170 1y7n_A Amyloid beta A4 precurs 99.2 5.6E-11 1.9E-15 104.9 12.3 75 22-104 13-88 (90)
171 1n7e_A AMPA receptor interacti 99.2 7E-11 2.4E-15 105.1 12.8 88 174-262 5-92 (97)
172 2vz5_A TAX1-binding protein 3; 99.2 3E-11 1E-15 115.2 11.1 88 18-106 21-124 (139)
173 2byg_A Channel associated prot 99.2 5.1E-11 1.8E-15 110.1 12.4 87 174-261 24-115 (117)
174 2q3g_A PDZ and LIM domain prot 99.2 2.7E-11 9.2E-16 105.9 9.9 83 176-261 5-87 (89)
175 2eno_A Synaptojanin-2-binding 99.2 9.1E-11 3.1E-15 108.6 14.0 88 173-261 16-108 (120)
176 1ueq_A Membrane associated gua 99.2 1.5E-10 5.3E-15 107.6 15.6 89 171-260 16-106 (123)
177 1qau_A Neuronal nitric oxide s 99.2 6.1E-11 2.1E-15 108.1 12.6 85 20-106 1-87 (112)
178 2fne_A Multiple PDZ domain pro 99.2 2.2E-11 7.7E-16 112.6 9.8 87 174-261 25-114 (117)
179 3l4f_D SH3 and multiple ankyri 99.2 3.9E-11 1.4E-15 113.3 11.6 87 173-260 26-124 (132)
180 2awx_A Synapse associated prot 99.2 4.8E-11 1.7E-15 107.7 11.7 88 174-262 3-95 (105)
181 2v90_A PDZ domain-containing p 99.2 4.3E-11 1.5E-15 106.1 11.2 87 174-262 3-91 (96)
182 4amh_A Disks large homolog 1; 99.2 3.3E-11 1.1E-15 109.4 10.5 82 181-262 8-94 (106)
183 4fln_A Protease DO-like 2, chl 99.2 1.8E-10 6.1E-15 132.2 18.9 184 32-256 253-469 (539)
184 3i4w_A Disks large homolog 4; 99.2 3.9E-11 1.3E-15 107.7 10.7 92 172-265 9-100 (104)
185 2vwr_A Ligand of NUMB protein 99.2 9.9E-11 3.4E-15 103.6 13.1 87 174-261 3-90 (95)
186 2cs5_A Tyrosine-protein phosph 99.2 3.2E-11 1.1E-15 111.4 10.0 88 173-260 14-106 (119)
187 2he4_A Na(+)/H(+) exchange reg 99.2 6.3E-11 2.2E-15 103.8 11.3 84 174-260 4-87 (90)
188 1ufx_A KIAA1526 protein; PDZ d 99.2 4.1E-11 1.4E-15 108.4 10.4 85 175-260 7-97 (103)
189 2fe5_A Presynaptic protein SAP 99.2 7.9E-11 2.7E-15 103.8 11.9 86 174-260 3-93 (94)
190 3o46_A Maguk P55 subfamily mem 99.2 7.5E-11 2.5E-15 104.0 11.8 84 174-259 4-87 (93)
191 1d5g_A Human phosphatase HPTP1 99.2 1E-10 3.6E-15 103.5 12.7 87 174-261 5-94 (96)
192 1wg6_A Hypothetical protein (r 99.2 3.8E-11 1.3E-15 112.6 10.5 87 175-261 26-123 (127)
193 1x6d_A Interleukin-16; PDZ dom 99.2 1.2E-10 4.1E-15 107.5 13.6 89 173-261 14-104 (119)
194 2qbw_A PDZ-fibronectin fusion 99.2 3.6E-11 1.2E-15 119.9 10.8 72 31-104 1-80 (195)
195 1uit_A Human discs large 5 pro 99.2 4.5E-11 1.5E-15 110.0 10.7 83 20-106 19-101 (117)
196 3tsv_A Tight junction protein 99.2 6.3E-11 2.2E-15 110.7 11.7 77 27-106 34-112 (124)
197 1uf1_A KIAA1526 protein; PDZ d 99.2 1.2E-10 4.2E-15 108.9 13.7 86 19-106 19-104 (128)
198 2csj_A TJP2 protein; PDZ domai 99.2 8.5E-11 2.9E-15 108.3 12.3 87 173-261 13-105 (117)
199 1va8_A Maguk P55 subfamily mem 99.2 1.4E-10 4.9E-15 106.3 13.8 85 173-261 24-109 (113)
200 2opg_A Multiple PDZ domain pro 99.2 1.1E-10 3.9E-15 103.7 12.7 88 174-262 4-92 (98)
201 1rgw_A ZAsp protein; PDZ, cyph 99.2 4.2E-11 1.4E-15 103.6 9.6 82 176-260 3-84 (85)
202 2d92_A INAD-like protein; PDZ 99.2 6.4E-11 2.2E-15 107.6 11.3 86 173-259 14-104 (108)
203 2ejy_A 55 kDa erythrocyte memb 99.2 5.9E-11 2E-15 106.5 10.8 83 175-259 13-95 (97)
204 2db5_A INAD-like protein; PDZ 99.2 4.1E-11 1.4E-15 112.2 10.2 88 173-260 24-115 (128)
205 2uzc_A Human pdlim5, PDZ and L 99.2 4.9E-11 1.7E-15 103.9 9.9 83 175-260 4-86 (88)
206 2vsv_A Rhophilin-2; scaffold p 99.2 5.5E-11 1.9E-15 108.9 10.6 81 20-106 23-104 (109)
207 2jxo_A Ezrin-radixin-moesin-bi 99.2 9.9E-11 3.4E-15 104.2 11.9 83 21-106 10-93 (98)
208 2d8i_A T-cell lymphoma invasio 99.2 2.7E-11 9.3E-16 111.8 8.5 93 11-106 6-101 (114)
209 2r4h_A Membrane-associated gua 99.2 8.5E-11 2.9E-15 107.6 11.6 87 174-261 24-110 (112)
210 2edv_A FERM and PDZ domain-con 99.2 9.9E-12 3.4E-16 110.7 5.1 80 21-106 9-89 (96)
211 2i04_A Membrane-associated gua 99.2 1.1E-10 3.9E-15 100.9 11.7 81 177-258 3-85 (85)
212 1wha_A KIAA0147 protein, scrib 99.2 8.9E-11 3.1E-15 106.0 11.4 87 174-261 7-99 (105)
213 2eeh_A PDZ domain-containing p 99.2 1.4E-10 4.7E-15 103.8 12.5 87 174-262 10-96 (100)
214 2pkt_A PDZ and LIM domain prot 99.2 9.1E-11 3.1E-15 103.0 11.1 84 176-262 5-88 (91)
215 2jil_A GRIP1 protein, glutamat 99.2 1.1E-10 3.6E-15 103.7 11.6 87 175-262 4-94 (97)
216 1m5z_A GRIP, AMPA receptor int 99.2 1.8E-10 6E-15 101.0 12.7 84 174-259 6-90 (91)
217 1x5q_A LAP4 protein; PDZ domai 99.2 2.2E-10 7.5E-15 104.2 13.7 90 170-261 11-106 (110)
218 1q3o_A Shank1; PDZ, GKAP, pept 99.2 1.6E-10 5.6E-15 104.9 12.8 87 174-261 7-105 (109)
219 1whd_A RGS3, regulator of G-pr 99.2 5.9E-11 2E-15 106.4 9.7 81 20-106 15-95 (100)
220 2djt_A Unnamed protein product 99.2 1.1E-10 3.8E-15 105.0 11.5 87 174-261 11-99 (104)
221 2yuy_A RHO GTPase activating p 99.2 1.2E-11 3.9E-16 115.8 5.2 87 18-106 6-120 (126)
222 2vsp_A PDZ domain-containing p 99.2 3.4E-11 1.2E-15 105.8 7.9 85 174-261 3-87 (91)
223 1uew_A Membrane associated gua 99.2 1.4E-10 4.8E-15 106.3 12.2 88 173-261 9-104 (114)
224 2o2t_A Multiple PDZ domain pro 99.2 4.4E-11 1.5E-15 110.0 8.7 88 174-261 20-111 (117)
225 2dmz_A INAD-like protein; PDZ 99.2 1.5E-10 5E-15 108.4 12.4 90 172-261 13-107 (129)
226 2jre_A C60-1 PDZ domain peptid 99.2 2.2E-10 7.6E-15 103.7 13.2 89 173-261 11-105 (108)
227 2daz_A INAD-like protein; PDZ 99.2 1.8E-10 6E-15 107.3 12.4 89 173-262 24-113 (124)
228 2dlu_A INAD-like protein; PDZ 99.2 3.1E-10 1.1E-14 103.3 13.8 86 174-262 15-100 (111)
229 3ngh_A PDZ domain-containing p 99.2 1E-10 3.4E-15 105.6 10.3 87 175-263 2-88 (106)
230 1uju_A Scribble; PDZ domain, c 99.2 2.6E-11 8.7E-16 110.7 6.4 86 175-260 10-104 (111)
231 3qe1_A Sorting nexin-27, G pro 99.2 2.1E-10 7.2E-15 103.7 12.4 86 174-261 6-103 (107)
232 2eeg_A PDZ and LIM domain prot 99.2 9.7E-11 3.3E-15 103.6 9.9 84 175-261 9-92 (94)
233 3r68_A Na(+)/H(+) exchange reg 99.2 1.2E-10 4.3E-15 102.7 10.6 85 174-261 5-89 (95)
234 3kzd_A TIAM-1, T-lymphoma inva 99.2 1.6E-10 5.5E-15 103.1 11.2 82 20-104 6-90 (94)
235 2kpk_A Membrane-associated gua 99.2 1.5E-10 5.1E-15 108.7 11.6 89 171-260 15-105 (129)
236 1g9o_A NHE-RF; PDZ domain, com 99.2 2.4E-10 8.3E-15 100.1 12.1 82 174-258 3-84 (91)
237 2f5y_A Regulator of G-protein 99.2 2.1E-10 7.3E-15 100.8 11.7 82 174-261 3-84 (91)
238 2h2b_A Tight junction protein 99.2 2.5E-10 8.6E-15 103.2 12.4 88 172-261 5-98 (107)
239 3gsl_A Disks large homolog 4; 99.2 1.9E-10 6.7E-15 113.9 12.7 84 22-106 102-190 (196)
240 3axa_A Afadin, nectin-3, prote 99.1 2E-10 6.8E-15 103.8 11.4 87 174-262 11-100 (106)
241 1wf8_A Neurabin-I; PDZ domain, 99.1 2E-10 7E-15 104.0 11.5 87 174-261 9-101 (107)
242 2fcf_A Multiple PDZ domain pro 99.1 2.8E-10 9.6E-15 102.0 12.1 88 174-261 4-100 (103)
243 1um1_A KIAA1849 protein, RSGI 99.1 2.8E-10 9.5E-15 103.5 12.2 87 174-261 8-97 (110)
244 1nf3_C PAR-6B; semi-CRIB motif 99.1 1.4E-10 4.8E-15 108.8 10.3 89 173-261 28-126 (128)
245 1wif_A RSGI RUH-020, riken cDN 99.1 5.1E-11 1.7E-15 111.9 7.1 83 19-105 26-110 (126)
246 2w4f_A Protein LAP4; structura 99.1 3.2E-10 1.1E-14 100.4 12.0 85 175-261 4-94 (97)
247 2eaq_A LIM domain only protein 99.1 2.2E-10 7.5E-15 100.2 10.6 80 23-106 6-89 (90)
248 2gzv_A PRKCA-binding protein; 99.1 3.4E-10 1.2E-14 104.2 12.4 86 174-259 24-109 (114)
249 1vb7_A PDZ and LIM domain 2; P 99.1 6.6E-11 2.3E-15 104.7 7.4 84 178-262 8-91 (94)
250 1v5q_A GRIP1 homolog, glutamat 99.1 4.6E-10 1.6E-14 104.2 13.4 90 172-261 13-108 (122)
251 1mfg_A ERB-B2 interacting prot 99.1 3.7E-10 1.3E-14 99.8 12.1 81 176-260 5-93 (95)
252 2d90_A PDZ domain containing p 99.1 2E-10 7E-15 103.0 10.4 86 174-262 6-91 (102)
253 1q7x_A PDZ2B domain of PTP-BAS 99.1 2.7E-10 9.1E-15 103.3 11.3 88 173-261 8-103 (108)
254 1wfg_A Regulating synaptic mem 99.1 3.8E-10 1.3E-14 106.4 12.7 77 184-260 46-127 (131)
255 1wf7_A Enigma homologue protei 99.1 1E-10 3.5E-15 105.2 8.3 85 174-261 5-89 (103)
256 2la8_A Inactivation-NO-after-p 99.1 2.1E-10 7.3E-15 104.2 10.5 82 175-259 3-84 (106)
257 2qkv_A Inactivation-NO-after-p 99.1 3E-10 1E-14 101.0 11.1 83 174-259 8-90 (96)
258 1ujv_A Membrane associated gua 99.1 4.3E-10 1.5E-14 100.2 12.0 82 18-106 8-91 (96)
259 2e7k_A Maguk P55 subfamily mem 99.1 1.4E-10 4.8E-15 102.3 8.8 82 174-259 6-87 (91)
260 3egg_C Spinophilin; PP1, serin 99.1 3.1E-10 1.1E-14 111.9 11.9 85 174-259 80-170 (170)
261 2yt7_A Amyloid beta A4 precurs 99.1 4.8E-10 1.7E-14 100.6 11.9 86 174-259 9-98 (101)
262 2kv8_A RGS12, regulator of G-p 99.1 1E-10 3.6E-15 100.8 7.3 80 174-259 2-81 (83)
263 3r0h_A INAD, inactivation-NO-a 99.1 2.2E-10 7.6E-15 115.0 10.8 83 21-106 114-196 (206)
264 2iwq_A Multiple PDZ domain pro 99.1 4.6E-10 1.6E-14 104.7 12.2 88 174-261 24-120 (123)
265 2eei_A PDZ domain-containing p 99.1 2.3E-10 8E-15 103.2 9.7 85 174-261 8-92 (106)
266 2rcz_A Tight junction protein 99.1 4.5E-10 1.5E-14 95.7 11.0 75 25-105 6-80 (81)
267 2g5m_B Neurabin-2; spinophilin 99.1 3.3E-10 1.1E-14 103.5 10.6 87 174-261 4-96 (113)
268 2kjd_A Sodium/hydrogen exchang 99.1 5.5E-10 1.9E-14 104.2 12.2 85 19-106 8-93 (128)
269 1n7t_A 99-MER peptide of densi 99.1 3.9E-10 1.3E-14 101.3 10.8 83 173-259 10-100 (103)
270 1wfv_A Membrane associated gua 99.1 1.3E-10 4.3E-15 104.2 7.5 87 174-261 11-97 (103)
271 1um7_A Synapse-associated prot 99.1 1.4E-10 4.9E-15 105.6 7.8 93 170-264 11-103 (113)
272 2dm8_A INAD-like protein; PDZ 99.1 4.1E-10 1.4E-14 103.3 10.9 88 174-262 17-105 (116)
273 3k1r_A Harmonin; protein-prote 99.1 2.3E-10 8E-15 114.5 10.0 87 173-261 83-169 (192)
274 2edp_A Fragment, shroom family 99.1 1.5E-10 5.2E-15 103.7 7.7 86 175-261 10-95 (100)
275 1v6b_A Harmonin isoform A1; st 99.1 4.9E-10 1.7E-14 103.6 11.3 84 174-259 18-106 (118)
276 1tp5_A Presynaptic density pro 99.1 4.7E-10 1.6E-14 103.4 11.0 93 171-265 11-103 (119)
277 2dls_A PDZ-rhogef, RHO guanine 99.1 7.6E-10 2.6E-14 97.7 11.8 81 174-261 8-88 (93)
278 2edz_A PDZ domain-containing p 99.1 3.8E-10 1.3E-14 103.4 10.0 87 174-262 13-99 (114)
279 3cyy_A Tight junction protein 99.1 7.4E-10 2.5E-14 97.0 11.1 80 21-106 3-83 (92)
280 1b8q_A Protein (neuronal nitri 99.1 1.9E-10 6.4E-15 107.4 7.6 87 18-106 6-94 (127)
281 1x5n_A Harmonin; PDZ domain, u 99.1 7.5E-10 2.6E-14 101.3 11.4 86 172-259 13-98 (114)
282 2koj_A Partitioning defective 99.1 1.5E-09 5.3E-14 98.6 13.4 87 174-261 11-102 (111)
283 2z17_A Pleckstrin homology SEC 99.1 4.7E-10 1.6E-14 101.0 9.6 82 174-256 15-103 (104)
284 2vsv_A Rhophilin-2; scaffold p 99.0 7.7E-10 2.6E-14 101.2 10.8 80 174-259 23-103 (109)
285 3shw_A Tight junction protein 99.0 4.9E-10 1.7E-14 126.6 11.4 81 21-106 2-84 (468)
286 3e17_A Tight junction protein 99.0 7.6E-10 2.6E-14 96.9 10.2 70 184-259 11-80 (88)
287 1vae_A Rhophilin 2, rhophilin, 99.0 1.8E-10 6.3E-15 105.6 6.2 81 20-106 15-96 (111)
288 2lob_A Golgi-associated PDZ an 98.6 2.2E-11 7.5E-16 111.9 0.0 86 172-258 25-111 (112)
289 2iwn_A Multiple PDZ domain pro 99.0 2E-09 6.7E-14 95.0 12.3 86 175-261 5-94 (97)
290 2jxo_A Ezrin-radixin-moesin-bi 99.0 1E-09 3.5E-14 97.5 10.5 84 174-260 9-93 (98)
291 1y7n_A Amyloid beta A4 precurs 99.0 1.9E-09 6.4E-14 95.1 11.9 74 177-258 15-88 (90)
292 1uf1_A KIAA1526 protein; PDZ d 99.0 5.7E-09 1.9E-13 97.5 15.6 88 174-263 20-107 (128)
293 3khf_A Microtubule-associated 99.0 6.2E-10 2.1E-14 99.1 8.6 82 178-261 6-94 (99)
294 2kom_A Partitioning defective 99.0 3E-09 1E-13 98.7 13.4 86 174-260 30-120 (121)
295 3bpu_A Membrane-associated gua 99.0 1.7E-09 5.9E-14 94.2 11.0 83 174-261 3-87 (88)
296 3soe_A Membrane-associated gua 99.0 1.7E-09 5.8E-14 99.6 11.2 82 174-262 12-95 (113)
297 2qt5_A Glutamate receptor-inte 99.0 2E-09 6.7E-14 107.9 12.6 87 174-260 7-93 (200)
298 2edv_A FERM and PDZ domain-con 99.0 6.3E-10 2.1E-14 99.0 7.7 81 174-260 8-89 (96)
299 3kzd_A TIAM-1, T-lymphoma inva 99.0 2.1E-09 7.2E-14 95.8 11.0 85 173-260 5-92 (94)
300 3tsz_A Tight junction protein 99.0 1.3E-09 4.5E-14 120.8 11.5 82 20-106 9-92 (391)
301 3sfj_A TAX1-binding protein 3; 99.0 1.9E-09 6.5E-14 96.7 10.4 72 186-258 19-103 (104)
302 3lju_X ARF-GAP with dual PH do 99.0 5E-09 1.7E-13 116.0 15.9 158 320-547 206-372 (386)
303 3qik_A Phosphatidylinositol 3, 99.0 1.7E-09 5.9E-14 97.3 9.7 74 26-103 22-98 (101)
304 1uez_A KIAA1526 protein; PDZ d 99.0 9.7E-10 3.3E-14 98.4 7.9 86 174-261 8-94 (101)
305 1whd_A RGS3, regulator of G-pr 99.0 2E-09 7E-14 96.3 10.0 82 173-260 14-95 (100)
306 3tsv_A Tight junction protein 99.0 1.5E-09 5.3E-14 101.3 9.1 85 175-264 30-116 (124)
307 1v5l_A PDZ and LIM domain 3; a 99.0 2.3E-10 8E-15 102.9 3.3 77 184-261 13-89 (103)
308 2yuy_A RHO GTPase activating p 99.0 3.9E-10 1.3E-14 105.4 4.8 86 174-261 8-121 (126)
309 1uit_A Human discs large 5 pro 98.9 5.6E-09 1.9E-13 95.9 12.4 86 174-263 19-104 (117)
310 1qau_A Neuronal nitric oxide s 98.9 6.2E-09 2.1E-13 94.7 12.5 85 176-262 3-89 (112)
311 2yub_A LIMK-2, LIM domain kina 98.9 1.8E-09 6.2E-14 100.0 8.8 86 20-106 12-105 (118)
312 1wh1_A KIAA1095 protein; PDZ d 98.9 1.5E-09 5.2E-14 101.0 7.9 88 17-106 16-107 (124)
313 1wif_A RSGI RUH-020, riken cDN 98.9 3E-09 1E-13 99.8 9.9 82 174-259 27-110 (126)
314 2krg_A Na(+)/H(+) exchange reg 98.9 1.8E-09 6.1E-14 110.5 9.0 86 18-106 7-93 (216)
315 1ujv_A Membrane associated gua 98.9 7.6E-09 2.6E-13 92.1 11.8 83 173-262 9-93 (96)
316 2d8i_A T-cell lymphoma invasio 98.9 3.2E-09 1.1E-13 97.9 9.5 88 173-263 14-104 (114)
317 2vz5_A TAX1-binding protein 3; 98.9 4.3E-09 1.5E-13 100.2 10.7 87 174-261 23-125 (139)
318 2eaq_A LIM domain only protein 98.9 6.4E-09 2.2E-13 90.8 10.5 80 177-260 6-89 (90)
319 2qbw_A PDZ-fibronectin fusion 98.9 5.5E-09 1.9E-13 104.0 10.7 71 186-258 2-80 (195)
320 2rcz_A Tight junction protein 98.9 1.1E-08 3.7E-13 87.0 10.9 76 178-259 5-80 (81)
321 2kjd_A Sodium/hydrogen exchang 98.9 7.6E-09 2.6E-13 96.4 10.7 86 174-262 9-95 (128)
322 1p1d_A PDZ45, glutamate recept 98.9 8.9E-09 3E-13 103.0 11.3 89 174-262 6-100 (196)
323 1vae_A Rhophilin 2, rhophilin, 98.8 3.8E-09 1.3E-13 96.8 7.3 81 174-260 15-96 (111)
324 3cyy_A Tight junction protein 98.8 1.6E-08 5.4E-13 88.4 10.8 74 182-261 11-84 (92)
325 1b8q_A Protein (neuronal nitri 98.8 7E-09 2.4E-13 96.7 7.9 87 174-262 8-96 (127)
326 2yub_A LIMK-2, LIM domain kina 98.8 2E-08 6.8E-13 93.0 10.9 88 174-262 15-107 (118)
327 3shw_A Tight junction protein 98.8 1.6E-08 5.6E-13 114.2 10.8 85 175-264 2-88 (468)
328 3qik_A Phosphatidylinositol 3, 98.8 2.4E-08 8.3E-13 89.9 9.5 78 175-257 18-98 (101)
329 1wgq_A FYVE, rhogef and PH dom 98.8 4.7E-08 1.6E-12 87.9 11.5 82 458-547 21-103 (109)
330 1v88_A Oxysterol binding prote 98.7 5.4E-08 1.9E-12 91.6 11.4 85 458-547 20-124 (130)
331 1wh1_A KIAA1095 protein; PDZ d 98.7 4.1E-08 1.4E-12 91.3 10.4 84 177-262 22-109 (124)
332 1unq_A RAC-alpha serine/threon 98.7 5.8E-08 2E-12 89.5 11.3 93 458-551 21-114 (125)
333 3tsz_A Tight junction protein 98.7 2.7E-08 9.1E-13 110.4 10.7 88 174-266 9-98 (391)
334 1u5d_A SKAP55, SRC kinase-asso 98.7 6.1E-08 2.1E-12 86.2 10.6 83 458-548 20-106 (108)
335 2coc_A FYVE, rhogef and PH dom 98.7 1.1E-07 3.6E-12 87.4 12.2 83 458-547 20-106 (112)
336 2w2x_D 1-phosphatidylinositol- 98.7 3.9E-08 1.3E-12 91.4 8.9 92 458-550 25-122 (124)
337 3cxb_B Pleckstrin homology dom 98.7 1E-07 3.5E-12 87.0 11.6 84 457-548 16-102 (112)
338 1w9e_A Syntenin 1; cell adhesi 98.7 6.9E-08 2.4E-12 94.0 11.1 82 174-259 4-86 (166)
339 2krg_A Na(+)/H(+) exchange reg 98.7 2.4E-08 8.1E-13 102.1 7.7 87 172-261 7-94 (216)
340 1dro_A Beta-spectrin; cytoskel 98.7 3.4E-08 1.2E-12 91.2 8.0 89 458-549 29-121 (122)
341 1pls_A Pleckstrin homology dom 98.7 2.1E-07 7.2E-12 84.0 12.4 84 458-549 18-103 (113)
342 1upq_A PEPP1; PH domain, phosp 98.7 1.2E-07 4.1E-12 86.8 10.9 85 458-550 25-112 (123)
343 2d9y_A Pleckstrin homology dom 98.6 1.7E-07 5.7E-12 84.9 11.6 82 458-547 25-109 (117)
344 2yry_A Pleckstrin homology dom 98.6 2E-07 6.8E-12 85.2 12.1 82 458-547 36-120 (122)
345 2dkp_A Pleckstrin homology dom 98.6 2.1E-07 7.2E-12 85.7 12.1 82 458-547 35-119 (128)
346 1v89_A Hypothetical protein KI 98.6 2.7E-07 9.1E-12 83.4 12.5 85 458-547 21-112 (118)
347 1fgy_A GRP1; PH domain, signal 98.6 2E-07 6.9E-12 85.5 11.8 85 458-547 18-120 (127)
348 1wi1_A Calcium-dependent activ 98.6 1.5E-07 5E-12 88.1 10.0 83 458-547 22-110 (126)
349 1wjm_A Beta-spectrin III; PH d 98.6 1.1E-07 3.9E-12 87.5 9.1 87 458-547 29-117 (123)
350 1wg7_A Dedicator of cytokinesi 98.6 9.9E-08 3.4E-12 90.9 8.8 88 458-552 37-129 (150)
351 2y7b_A Actin-binding protein a 98.6 8.1E-08 2.8E-12 89.4 8.0 89 458-548 20-129 (134)
352 2i5f_A Pleckstrin; PH domain, 98.6 3.1E-07 1E-11 82.1 11.5 81 458-546 20-108 (109)
353 2rsg_A Collagen type IV alpha- 98.6 1.4E-07 4.7E-12 82.6 9.0 79 458-545 14-92 (94)
354 2d9v_A Pleckstrin homology dom 98.6 4.1E-07 1.4E-11 85.0 12.5 86 458-547 21-114 (130)
355 2da0_A 130-kDa phosphatidylino 98.6 2.9E-07 9.8E-12 83.8 11.2 84 458-553 24-107 (114)
356 2dn6_A KIAA0640 protein; PH do 98.6 7.6E-07 2.6E-11 80.3 13.8 87 458-553 21-109 (115)
357 1fao_A Dual adaptor of phospho 98.6 2.4E-07 8.4E-12 85.3 10.7 82 458-548 31-113 (126)
358 3aj4_A Pleckstrin homology dom 98.6 2.4E-07 8.3E-12 83.5 10.3 86 458-546 18-110 (112)
359 2cof_A Protein KIAA1914; PH do 98.6 1.1E-07 3.8E-12 85.5 7.9 83 458-547 19-101 (107)
360 1u5f_A SRC-associated adaptor 98.6 2.9E-07 9.8E-12 87.6 11.0 82 458-547 34-119 (148)
361 1dyn_A Dynamin; signal transdu 98.5 3.1E-07 1E-11 85.3 10.4 86 457-545 26-115 (125)
362 1x1f_A Signal-transducing adap 98.5 7E-07 2.4E-11 86.1 12.8 83 458-547 31-113 (149)
363 1btn_A Beta-spectrin; signal t 98.5 1.7E-07 5.9E-12 83.3 7.5 86 457-545 19-106 (106)
364 4a6h_A Phosphatidylinositol 4, 98.5 4.9E-07 1.7E-11 84.0 10.5 87 458-547 19-118 (120)
365 1x05_A Pleckstrin; PH domain, 98.5 4.4E-07 1.5E-11 83.9 10.2 82 458-547 31-120 (129)
366 2cod_A Centaurin-delta 1; ARF 98.5 9.3E-07 3.2E-11 80.1 12.0 80 458-549 22-101 (115)
367 2dhk_A TBC1 domain family memb 98.5 1E-06 3.5E-11 80.8 12.2 84 458-551 23-108 (119)
368 2l97_A HTRA, putative serine p 98.5 2.5E-07 8.6E-12 87.3 8.1 58 45-106 56-115 (134)
369 2i6v_A General secretion pathw 98.5 1.3E-07 4.3E-12 82.4 5.4 58 46-106 19-78 (87)
370 3suz_A Amyloid beta A4 precurs 98.5 1E-07 3.6E-12 105.5 6.1 88 174-261 204-295 (388)
371 1v5u_A SBF1, SET binding facto 98.5 6.3E-07 2.1E-11 81.1 10.1 80 458-546 21-110 (117)
372 1eaz_A Tandem PH domain contai 98.4 8.5E-07 2.9E-11 81.1 10.4 82 458-548 27-112 (125)
373 1v5p_A Pleckstrin homology dom 98.4 4.9E-07 1.7E-11 84.6 8.7 85 458-547 29-120 (126)
374 2pzd_A Serine protease HTRA2; 98.4 7E-07 2.4E-11 81.2 9.1 58 45-106 34-91 (113)
375 1u5e_A SRC-associated adaptor 98.4 6E-07 2E-11 91.3 9.6 82 458-547 123-208 (211)
376 3id1_A Regulator of sigma E pr 98.4 4.5E-07 1.5E-11 80.5 7.5 56 48-106 4-61 (95)
377 3rcp_A Pleckstrin homology dom 98.4 1.2E-06 4E-11 77.7 9.8 81 458-546 12-92 (103)
378 3i18_A LMO2051 protein; alpha- 98.4 3.5E-07 1.2E-11 81.7 6.3 58 45-106 6-65 (100)
379 2i4s_A General secretion pathw 98.4 8.6E-07 3E-11 79.9 8.2 59 47-106 38-96 (105)
380 2kl1_A YLBL protein; structure 98.4 2.2E-07 7.6E-12 82.2 4.1 59 44-106 3-63 (94)
381 2dtc_A RAL guanine nucleotide 98.3 1.2E-06 4E-11 82.1 9.1 88 458-547 21-112 (126)
382 3pp2_A RHO GTPase-activating p 98.3 1E-06 3.6E-11 81.8 8.8 86 458-546 28-122 (124)
383 1x1g_A Pleckstrin 2; PH domain 98.3 8.9E-07 3E-11 81.7 7.9 82 458-546 31-123 (129)
384 2rlo_A Centaurin-gamma 1; spli 98.3 2.3E-06 7.9E-11 79.4 10.7 90 458-550 19-127 (128)
385 3tca_A Amyloid beta A4 precurs 98.3 3.5E-06 1.2E-10 88.6 13.4 91 458-548 181-277 (291)
386 3tfm_A Myosin X; split PH doma 98.3 1.5E-06 5.2E-11 89.2 10.2 137 378-548 19-156 (228)
387 2d9x_A Oxysterol binding prote 98.3 1.5E-06 5E-11 79.7 9.0 88 458-553 21-110 (120)
388 2p0d_A RHO GTPase-activating p 98.3 1.8E-06 6.1E-11 80.8 9.6 88 458-548 31-125 (129)
389 3a8p_A T-lymphoma invasion and 98.3 2.1E-06 7.3E-11 90.1 11.0 90 458-550 36-127 (263)
390 2p3w_A Probable serine proteas 98.3 1.2E-06 4.1E-11 79.6 7.9 58 45-106 34-91 (112)
391 2j59_M RHO-GTPase activating p 98.3 2.7E-06 9.2E-11 82.6 11.0 83 458-547 26-111 (168)
392 2kjp_A Uncharacterized protein 98.3 1.6E-07 5.4E-12 82.9 2.0 56 47-106 2-59 (91)
393 1fc6_A Photosystem II D1 prote 98.3 1.8E-06 6.3E-11 95.4 10.2 74 32-106 85-159 (388)
394 3stj_A Protease DEGQ; serine p 98.3 1.1E-06 3.7E-11 95.9 7.7 59 45-106 262-322 (345)
395 2i6v_A General secretion pathw 98.3 1E-06 3.6E-11 76.6 6.0 59 200-261 19-79 (87)
396 2pzd_A Serine protease HTRA2; 98.3 2.6E-06 9E-11 77.4 8.9 59 199-261 34-92 (113)
397 2zpm_A Regulator of sigma E pr 98.2 7E-07 2.4E-11 77.9 4.6 58 46-106 4-62 (91)
398 2l97_A HTRA, putative serine p 98.2 3.7E-06 1.3E-10 79.2 9.8 60 199-262 56-117 (134)
399 3i18_A LMO2051 protein; alpha- 98.2 3.4E-06 1.2E-10 75.3 8.5 60 199-262 6-67 (100)
400 2zpm_A Regulator of sigma E pr 98.2 2E-06 7E-11 74.9 6.3 58 201-261 5-63 (91)
401 2kjp_A Uncharacterized protein 98.2 5.5E-07 1.9E-11 79.4 2.6 58 201-262 2-61 (91)
402 2kl1_A YLBL protein; structure 98.2 2.1E-06 7.3E-11 75.9 6.3 60 199-262 4-65 (94)
403 3k50_A Putative S41 protease; 98.2 1.6E-06 5.6E-11 96.4 6.9 73 31-107 73-147 (403)
404 1btk_A Bruton'S tyrosine kinas 98.2 8.4E-06 2.9E-10 79.9 11.1 84 458-547 21-132 (169)
405 1te0_A Protease DEGS; two doma 98.2 2E-06 6.9E-11 92.4 7.0 59 45-106 243-303 (318)
406 3id1_A Regulator of sigma E pr 98.1 4.2E-06 1.4E-10 74.1 7.8 57 202-261 4-62 (95)
407 2p3w_A Probable serine proteas 98.1 5.4E-06 1.8E-10 75.3 8.3 59 199-261 34-92 (112)
408 1y8t_A Hypothetical protein RV 98.1 3.6E-06 1.2E-10 90.6 7.5 70 33-106 230-302 (324)
409 2r09_A Cytohesin-3; autoinhibi 98.1 1.3E-05 4.3E-10 87.5 11.5 85 458-547 226-328 (347)
410 2hga_A Conserved protein MTH13 98.0 3.9E-06 1.3E-10 78.4 5.5 57 45-106 24-82 (125)
411 4h8s_A DCC-interacting protein 98.0 3.9E-05 1.3E-09 85.1 14.0 82 458-547 317-398 (407)
412 3rle_A Golgi reassembly-stacki 98.0 8.3E-06 2.8E-10 82.5 7.5 69 190-260 6-76 (209)
413 4fgm_A Aminopeptidase N family 98.0 1.4E-05 4.8E-10 93.2 10.2 69 31-106 484-554 (597)
414 2i4s_A General secretion pathw 98.0 6.6E-06 2.3E-10 74.1 5.7 58 201-261 38-97 (105)
415 2lul_A Tyrosine-protein kinase 98.0 7.6E-05 2.6E-09 72.6 13.6 86 458-551 33-125 (164)
416 3qo6_A Protease DO-like 1, chl 98.0 5.5E-06 1.9E-10 90.2 5.9 58 46-106 251-321 (348)
417 4a8c_A Periplasmic PH-dependen 97.9 1.7E-05 5.9E-10 89.0 9.2 58 46-106 363-420 (436)
418 2q13_A DCC-interacting protein 97.9 1.5E-05 5.1E-10 87.9 8.4 82 458-547 294-375 (385)
419 1fc6_A Photosystem II D1 prote 97.9 2.2E-05 7.4E-10 86.8 9.3 75 186-261 85-160 (388)
420 2ys3_A UNC-112-related protein 97.9 3.1E-05 1.1E-09 73.0 8.9 87 457-546 24-111 (137)
421 1lcy_A HTRA2 serine protease; 97.9 1.8E-05 6.3E-10 85.3 7.8 58 45-106 255-312 (325)
422 3a8n_A TIAM-1, T-lymphoma inva 97.8 2.4E-05 8.1E-10 82.7 7.6 91 457-550 35-127 (279)
423 1te0_A Protease DEGS; two doma 97.8 3.4E-05 1.2E-09 82.9 9.0 61 199-262 243-305 (318)
424 2fjl_A 1-phosphatidylinositol- 97.8 5.5E-05 1.9E-09 72.5 9.1 39 509-548 111-149 (150)
425 3pv2_A DEGQ; trypsin fold, PDZ 97.8 2.3E-05 7.8E-10 88.4 7.5 58 46-106 386-443 (451)
426 3stj_A Protease DEGQ; serine p 97.8 3.3E-05 1.1E-09 84.2 8.4 61 199-262 262-324 (345)
427 2hga_A Conserved protein MTH13 97.8 3.5E-05 1.2E-09 71.9 7.2 58 199-261 24-83 (125)
428 1y8t_A Hypothetical protein RV 97.8 5.6E-05 1.9E-09 81.2 9.8 72 186-261 229-303 (324)
429 1qqg_A IRS-1, insulin receptor 97.7 3.9E-05 1.3E-09 80.6 7.2 86 460-549 21-114 (264)
430 1lcy_A HTRA2 serine protease; 97.7 6.1E-05 2.1E-09 81.2 8.2 59 199-261 255-313 (325)
431 3k50_A Putative S41 protease; 97.6 4.7E-05 1.6E-09 84.6 6.2 73 185-261 73-147 (403)
432 4ejn_A RAC-alpha serine/threon 97.6 0.00018 6.3E-09 80.0 10.7 88 458-546 19-107 (446)
433 3qo6_A Protease DO-like 1, chl 97.6 7.1E-05 2.4E-09 81.4 7.1 60 200-262 251-323 (348)
434 3num_A Serine protease HTRA1; 97.6 1.1E-05 3.7E-10 87.2 0.0 58 45-106 253-310 (332)
435 4fgm_A Aminopeptidase N family 97.5 9E-05 3.1E-09 86.4 7.2 70 186-262 485-556 (597)
436 4gmv_A RAS-associated and plec 97.4 0.00054 1.9E-08 72.4 11.1 90 458-548 171-267 (281)
437 3hk0_A Growth factor receptor- 97.4 0.00071 2.4E-08 70.6 11.1 91 458-549 145-242 (256)
438 2rov_A RHO-associated protein 97.4 0.00036 1.2E-08 64.3 7.9 85 460-546 19-114 (117)
439 3num_A Serine protease HTRA1; 97.4 2.8E-05 9.6E-10 84.0 0.0 60 199-262 253-312 (332)
440 1ky9_A Protease DO, DEGP, HTRA 97.3 4E-05 1.4E-09 86.4 0.0 69 34-106 372-440 (448)
441 4f7h_A Fermitin family homolog 97.2 0.00099 3.4E-08 64.5 8.9 87 457-546 62-149 (173)
442 4bbk_A Kindlin-1, fermitin fam 97.1 0.0012 4.1E-08 63.3 8.8 87 457-546 41-128 (165)
443 1k32_A Tricorn protease; prote 97.0 0.0011 3.6E-08 81.6 8.9 70 31-106 736-815 (1045)
444 3lju_X ARF-GAP with dual PH do 96.9 0.0013 4.5E-08 72.6 7.9 87 458-549 159-248 (386)
445 2d9w_A Docking protein 2; PH d 96.8 0.0088 3E-07 55.5 11.2 84 458-547 27-121 (127)
446 1k32_A Tricorn protease; prote 96.3 0.0048 1.6E-07 75.8 7.7 70 185-260 736-815 (1045)
447 4fln_A Protease DO-like 2, chl 96.0 0.0065 2.2E-07 69.8 6.2 63 199-263 276-348 (539)
448 3tfm_A Myosin X; split PH doma 95.1 0.025 8.7E-07 57.6 6.2 53 302-359 104-156 (228)
449 2p0d_A RHO GTPase-activating p 94.9 0.041 1.4E-06 50.8 6.5 59 301-361 69-127 (129)
450 3ml4_A Protein DOK-7; tyrosine 94.3 0.44 1.5E-05 48.3 12.8 129 457-606 19-165 (224)
451 2dtc_A RAL guanine nucleotide 94.1 0.063 2.2E-06 50.0 5.8 60 301-362 57-116 (126)
452 2w2x_D 1-phosphatidylinositol- 93.9 0.066 2.2E-06 49.1 5.5 61 301-361 61-122 (124)
453 1dro_A Beta-spectrin; cytoskel 93.7 0.1 3.5E-06 47.3 6.3 40 320-360 82-121 (122)
454 3pp2_A RHO GTPase-activating p 93.5 0.12 4E-06 47.4 6.4 56 302-358 68-123 (124)
455 4h8s_A DCC-interacting protein 93.2 0.12 4.1E-06 57.0 7.0 58 302-361 344-401 (407)
456 1pls_A Pleckstrin homology dom 92.9 0.15 5E-06 45.2 5.9 57 302-359 46-102 (113)
457 1wg7_A Dedicator of cytokinesi 92.8 0.2 7E-06 46.7 7.1 62 303-367 72-133 (150)
458 1zc3_B Exocyst complex protein 92.8 0.16 5.4E-06 46.2 6.1 81 464-550 29-110 (113)
459 1v89_A Hypothetical protein KI 92.7 0.2 6.9E-06 44.2 6.6 57 302-358 49-112 (118)
460 1wjm_A Beta-spectrin III; PH d 92.6 0.16 5.4E-06 45.9 5.9 41 319-360 79-119 (123)
461 3cxb_B Pleckstrin homology dom 92.5 0.14 4.9E-06 45.9 5.4 41 319-360 63-103 (112)
462 2rlo_A Centaurin-gamma 1; spli 92.3 0.16 5.6E-06 46.3 5.6 41 319-360 86-126 (128)
463 1fgy_A GRP1; PH domain, signal 92.1 0.22 7.4E-06 44.7 6.1 55 302-358 46-120 (127)
464 2dn6_A KIAA0640 protein; PH do 91.9 0.25 8.5E-06 43.6 6.2 41 318-360 65-105 (115)
465 2coa_A Protein kinase C, D2 ty 91.9 0.36 1.2E-05 44.6 7.3 78 458-545 21-117 (125)
466 2i5f_A Pleckstrin; PH domain, 91.9 0.33 1.1E-05 42.3 6.9 37 321-358 73-109 (109)
467 2d9z_A Protein kinase C, NU ty 91.8 0.61 2.1E-05 43.3 8.6 79 458-546 21-122 (129)
468 1v88_A Oxysterol binding prote 91.8 0.2 6.8E-06 46.5 5.5 56 301-358 47-124 (130)
469 2coc_A FYVE, rhogef and PH dom 91.6 0.4 1.4E-05 43.4 7.1 58 300-359 49-107 (112)
470 1u5d_A SKAP55, SRC kinase-asso 91.3 0.21 7.2E-06 43.3 4.9 40 320-360 68-107 (108)
471 1btn_A Beta-spectrin; signal t 91.2 0.27 9.4E-06 42.6 5.6 37 319-356 70-106 (106)
472 1unq_A RAC-alpha serine/threon 91.2 0.24 8.3E-06 44.7 5.4 63 302-364 50-116 (125)
473 1x05_A Pleckstrin; PH domain, 90.8 0.3 1E-05 44.2 5.6 39 321-360 84-122 (129)
474 3rcp_A Pleckstrin homology dom 90.4 0.26 9E-06 42.7 4.7 56 301-361 41-96 (103)
475 1wgq_A FYVE, rhogef and PH dom 90.4 0.39 1.3E-05 42.2 5.8 55 302-358 49-103 (109)
476 2d9y_A Pleckstrin homology dom 90.2 0.45 1.5E-05 42.0 6.1 56 302-358 53-109 (117)
477 2dkp_A Pleckstrin homology dom 90.2 0.47 1.6E-05 42.6 6.3 56 302-358 63-119 (128)
478 2q13_A DCC-interacting protein 90.0 0.26 9E-06 53.8 5.3 58 303-362 322-379 (385)
479 1v5m_A SH2 and PH domain-conta 89.7 0.92 3.2E-05 42.3 7.8 84 456-546 37-129 (136)
480 2da0_A 130-kDa phosphatidylino 89.7 0.24 8.2E-06 44.2 3.9 41 320-362 65-105 (114)
481 2d9x_A Oxysterol binding prote 89.7 0.43 1.5E-05 42.8 5.6 56 302-362 53-108 (120)
482 1upq_A PEPP1; PH domain, phosp 89.3 0.6 2.1E-05 41.6 6.3 57 302-359 53-110 (123)
483 2d9v_A Pleckstrin homology dom 89.3 0.53 1.8E-05 43.1 6.0 38 320-358 77-114 (130)
484 2fjl_A 1-phosphatidylinositol- 89.2 0.7 2.4E-05 44.2 6.8 58 301-358 90-148 (150)
485 1w1g_A HPDK1, 3-phosphoinositi 89.1 1.1 3.7E-05 42.9 8.1 77 460-549 65-141 (151)
486 2dhk_A TBC1 domain family memb 89.1 0.45 1.6E-05 42.7 5.3 53 302-359 53-105 (119)
487 2y7b_A Actin-binding protein a 89.1 0.62 2.1E-05 42.3 6.3 42 320-361 72-131 (134)
488 1qqg_A IRS-1, insulin receptor 89.1 4.7 0.00016 41.8 13.7 58 301-361 58-115 (264)
489 2cof_A Protein KIAA1914; PH do 88.4 0.46 1.6E-05 41.7 4.8 39 320-359 64-102 (107)
490 3a8p_A T-lymphoma invasion and 88.4 0.65 2.2E-05 48.3 6.6 58 302-361 70-127 (263)
491 2yry_A Pleckstrin homology dom 88.3 0.63 2.1E-05 41.4 5.7 38 320-358 83-120 (122)
492 3aj4_A Pleckstrin homology dom 88.1 0.49 1.7E-05 41.6 4.7 37 321-358 75-111 (112)
493 1fao_A Dual adaptor of phospho 87.7 0.73 2.5E-05 41.4 5.7 57 302-361 59-115 (126)
494 1u5f_A SRC-associated adaptor 87.6 0.52 1.8E-05 43.9 4.8 41 321-362 83-123 (148)
495 2j59_M RHO-GTPase activating p 87.6 0.64 2.2E-05 44.3 5.6 40 320-361 75-114 (168)
496 1dyn_A Dynamin; signal transdu 87.4 0.79 2.7E-05 42.5 5.7 56 301-356 54-115 (125)
497 4a6h_A Phosphatidylinositol 4, 87.2 0.87 3E-05 41.6 5.9 57 301-358 49-118 (120)
498 1x1g_A Pleckstrin 2; PH domain 87.1 0.53 1.8E-05 42.4 4.4 38 321-359 88-125 (129)
499 1x1f_A Signal-transducing adap 86.6 1 3.4E-05 42.9 6.2 37 320-358 77-113 (149)
500 1wi1_A Calcium-dependent activ 86.5 1.3 4.5E-05 41.1 6.7 55 302-358 54-110 (126)
No 1
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.98 E-value=2.2e-31 Score=280.07 Aligned_cols=248 Identities=42% Similarity=0.685 Sum_probs=203.7
Q ss_pred cccceeeeeec-------cceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccccceEEEE
Q psy4897 107 GRCGTLETYVR-------GQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRIIR 179 (774)
Q Consensus 107 ~ks~~~~~~~~-------~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~~~r~V~ 179 (774)
.+++.+.++.+ ++|.++...|..+.++++.+.....++..... .....++.....++|+.+...++.|.
T Consensus 7 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~lp~~~~~~~r~V~ 82 (263)
T 1z87_A 7 PRTGLLELRCGAGSGAGGERWQRVLLSLAEDALTVSPADGEPGPEPEPAQ----LNGAAEPGAAPPQLPEALLLQRRRVT 82 (263)
T ss_dssp CEEEEEEEECSTTSCCSSCCEEEEEEEECSSEEEEECCCCSCCSCSSCCC----CSCSCSSSSSCSCCCCTTSCSSEEEC
T ss_pred ccceeEEEEecCcccCCCCceEEeeeecccceEEEecccccccccccccc----cCCCccccccCCCCCCcCCCccEEEE
Confidence 34455555555 68999999999999999877653322211110 11112223334566777777899999
Q ss_pred EeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEe
Q psy4897 180 VKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYL 259 (774)
Q Consensus 180 L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~ 259 (774)
|.|....+|||.+.++.+...|++|..|.+++||+++++|++||+|++|||++|.+++|++++.+|+..++.|+|+|.|.
T Consensus 83 L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L~V~R~ 162 (263)
T 1z87_A 83 VRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM 162 (263)
T ss_dssp CCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCEEEECC
T ss_pred EEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEeC
Confidence 99987789999999988777899999999999999953499999999999999999999999999999999999999999
Q ss_pred cccccccccCcccccccccccCCCCCC-CCCCCCCCCCCCCCcCcccceeeEeeecccccCCCCceEEEecCCCceeEEE
Q psy4897 260 REVTPYFRKASIISEVGWELQRGFLSD-SPPSPSPQSSQRADTRYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCIL 338 (774)
Q Consensus 260 ~~~~~~~~~~~~~~~l~w~~~~~~~~~-~~~~~~~~~~~~~~~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~L 338 (774)
++..+++++......++|..+.++.+. .+...++.+.+|.+.+.+|++|||++|++.++|+|+|+|||+++||.++++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~d~~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l 242 (263)
T 1z87_A 163 KEVSPYFKNSAGGTSVGWDSPPASPLQRQPSSPGPQPRNLSEAKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFL 242 (263)
T ss_dssp SSSSCSSSCSSCCCCCSSSCCSCCCSSSSSCSSSCCCCCCSSCEEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEE
T ss_pred ccccccccccCcccccccccCCCCCCCCCCCCCCCCCcCcccccccCcceeeeeeeccccCCCCceEEEECCCCCeeEEE
Confidence 999999998888888999876644332 2223345557899999999999999999999999999999999999999999
Q ss_pred eeCChHhHHHHHHHHHHHhh
Q psy4897 339 RASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 339 r~~d~~~~~~W~~Ai~~ni~ 358 (774)
||+|.+++.+||+|||.||.
T Consensus 243 ~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 243 RAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp ECSSHHHHHHHHHHHHHHHC
T ss_pred EECCHHHHHHHHHHHHHHhc
Confidence 99999999999999999985
No 2
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.93 E-value=7.3e-25 Score=218.38 Aligned_cols=179 Identities=40% Similarity=0.541 Sum_probs=151.4
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCC-----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~-----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
.++++|++.+. +++|||+|.+|.+. ..+++|..|.|+|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 4 ~~~~~v~l~~~-~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (196)
T 3gsl_A 4 MEYEEITLERG-NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 82 (196)
T ss_dssp EEEEEEEEECB-TTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred cEEEEEEEEEC-CCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45677888665 67899999999876 4689999999999999998899999999999999999999999999999
Q ss_pred cCceEEEEeeecccccceeeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCcccc
Q psy4897 94 AGKVVELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVEN 173 (774)
Q Consensus 94 ag~~V~L~V~R~~~ks~~~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~ 173 (774)
+++.+.|+|.|..... .
T Consensus 83 ~g~~v~l~v~r~~~~~---------------------------------------------------------------~ 99 (196)
T 3gsl_A 83 AGSIVRLYVMRRKPPA---------------------------------------------------------------E 99 (196)
T ss_dssp SCSEEEEEEEEECCCC---------------------------------------------------------------E
T ss_pred CCCcEEEEEEecCCCc---------------------------------------------------------------c
Confidence 9999999998754110 0
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
....+.+.+. ..++||.+.++.+. ..+++|..|.+++||+++|+|++||+|++|||++|.++++++++++|++.
T Consensus 100 ~~~~v~l~~~-~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 178 (196)
T 3gsl_A 100 KVMEIKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT 178 (196)
T ss_dssp EEEEEEEEEB-TTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC
T ss_pred ccEEEEEecC-CCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC
Confidence 1234445443 35789998765432 35799999999999999988999999999999999999999999999999
Q ss_pred CcceEEEEEEeccc
Q psy4897 249 GKLVELEVKYLREV 262 (774)
Q Consensus 249 g~~V~L~V~R~~~~ 262 (774)
++.+.|+|.|....
T Consensus 179 ~~~v~l~v~R~~~~ 192 (196)
T 3gsl_A 179 YDVVYLKVAKPSNA 192 (196)
T ss_dssp CEEEEEEEEEESCC
T ss_pred CCeEEEEEeCCCCc
Confidence 99999999987653
No 3
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.93 E-value=2.5e-24 Score=217.34 Aligned_cols=181 Identities=20% Similarity=0.244 Sum_probs=152.1
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCCC--CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCC--CCHHHHHHHH
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKENK--MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLRE--ATHDEAVKAL 91 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~--~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~--~sh~eaV~lL 91 (774)
....+..++++.+ .+.+|||+|.+|.+.. .|++|..|.++|||+++|+|++||+|++|||++|.+ ++|.+++.++
T Consensus 14 ~~~~~~~~v~~~~-~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 92 (206)
T 3r0h_A 14 IKPNKKILIELKV-EKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLF 92 (206)
T ss_dssp CCTTSCEEEEEEC-TTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHH
T ss_pred CCCCCEEEEEEEe-CCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHH
Confidence 3455677788866 6799999999998764 489999999999999998899999999999999999 9999999999
Q ss_pred HhcCce-EEEEeeecccccceeeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCc
Q psy4897 92 KRAGKV-VELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDS 170 (774)
Q Consensus 92 k~ag~~-V~L~V~R~~~ks~~~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~ 170 (774)
+.++.. |.|+|.|.....
T Consensus 93 ~~~~~~~v~l~v~R~~~~~------------------------------------------------------------- 111 (206)
T 3r0h_A 93 HTTYEKAVTLTVFRADPPE------------------------------------------------------------- 111 (206)
T ss_dssp HSCCSSEEEEEEECCSSCC-------------------------------------------------------------
T ss_pred HhcCCCceEEEEEecccCC-------------------------------------------------------------
Confidence 998887 999998764210
Q ss_pred cccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 171 VENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 171 ~~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
.....+.+.+....++||.+... ..+++|..|.++|+|+++|+|++||+|++|||++|.++++++++.++++.++
T Consensus 112 --~~~~~v~l~~~~~~~lG~~~~~~---~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 186 (206)
T 3r0h_A 112 --LEKFNVDLMKKAGKELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANG 186 (206)
T ss_dssp --EEEEEEEEECCTTCCCCEEEEEC---SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred --CcEEEEEEecCCCCccCeEEEcC---CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 01233444444456799998754 4689999999999999998899999999999999999999999999999889
Q ss_pred ceEEEEEEecccc
Q psy4897 251 LVELEVKYLREVT 263 (774)
Q Consensus 251 ~V~L~V~R~~~~~ 263 (774)
.+.|+|.|.....
T Consensus 187 ~v~L~V~R~~~~~ 199 (206)
T 3r0h_A 187 KVSMEVTRPKPTL 199 (206)
T ss_dssp EEEEEEEEECCCC
T ss_pred eEEEEEEeCCCCC
Confidence 9999999865433
No 4
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.92 E-value=1.8e-23 Score=210.53 Aligned_cols=188 Identities=32% Similarity=0.457 Sum_probs=154.5
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
...+.|.+.++++.+|||+|.+|.+...+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++.+++.|
T Consensus 6 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 85 (200)
T 2qt5_A 6 KGSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERV 85 (200)
T ss_dssp EEEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEE
T ss_pred CCCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 45788999999999999999999988889999999999999999559999999999999999999999999999999999
Q ss_pred EEEeeecccccceeeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccccceEEE
Q psy4897 99 ELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRII 178 (774)
Q Consensus 99 ~L~V~R~~~ks~~~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~~~r~V 178 (774)
.|+|.|+.+... .++ .........+
T Consensus 86 ~l~v~R~~~~~~-----------------------------------~~g--------------------~~~~~~~~~v 110 (200)
T 2qt5_A 86 VLEVEYELPPVS-----------------------------------IQG--------------------SSVMFRTVEV 110 (200)
T ss_dssp EEEEEEECCCCC-----------------------------------CCC--------------------SSEEEEEEEE
T ss_pred EEEEeccCCCcc-----------------------------------cCC--------------------CccceeEEEE
Confidence 999987542100 000 0000012334
Q ss_pred EEeccCCCCcceEEeCCCCC----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEE
Q psy4897 179 RVKKSENNGLGISIKGGKEN----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVEL 254 (774)
Q Consensus 179 ~L~k~~~~~LGfsi~gg~~~----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L 254 (774)
.+.+ ....+||.+.++... ..+++|..|.++++|+++|.|++||+|++|||+++.++++++++++|+..++.+.|
T Consensus 111 ~l~~-~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 189 (200)
T 2qt5_A 111 TLHK-EGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATL 189 (200)
T ss_dssp EEEC-BTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEE
T ss_pred EEec-CCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4443 356799998865432 35799999999999999977999999999999999988899999999998899999
Q ss_pred EEEEeccc
Q psy4897 255 EVKYLREV 262 (774)
Q Consensus 255 ~V~R~~~~ 262 (774)
+|.|....
T Consensus 190 ~v~R~~~~ 197 (200)
T 2qt5_A 190 LIEYDVSV 197 (200)
T ss_dssp EEEEEEEC
T ss_pred EEEECCcc
Confidence 99987653
No 5
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.89 E-value=5e-22 Score=199.73 Aligned_cols=183 Identities=26% Similarity=0.393 Sum_probs=149.8
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCC----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKEN----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
.+.++|++.+.+..+|||+|.+|.+. ..+++|..|.|+|||+++|.|++||+|++|||+++.++++.++..+++..
T Consensus 5 ~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 84 (196)
T 1p1d_A 5 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 84 (196)
T ss_dssp CEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTC
T ss_pred cEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 35678899888889999999998653 35799999999999999977999999999999999999999999999987
Q ss_pred --CceEEEEeeecccccceeeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccc
Q psy4897 95 --GKVVELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVE 172 (774)
Q Consensus 95 --g~~V~L~V~R~~~ks~~~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~ 172 (774)
++.|.|+|.|+..... + |.
T Consensus 85 ~~g~~v~l~v~R~~~~~~----------------~----------------------------------------~~--- 105 (196)
T 1p1d_A 85 SITSKVTLEIEFDVAESV----------------I----------------------------------------PS--- 105 (196)
T ss_dssp CSSSEEEEEEEECSCSCC----------------B----------------------------------------CC---
T ss_pred CCCCeEEEEEEecCCCCC----------------C----------------------------------------CC---
Confidence 7899999987652100 0 00
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCC--CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKEN--KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~--~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
.....+.+.+.....+||.+...... ..+++|..|.+++||+++|.|++||+|++|||+++.+++++++.++|++.++
T Consensus 106 ~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 185 (196)
T 1p1d_A 106 SGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCED 185 (196)
T ss_dssp SSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTT
T ss_pred CCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 01233444433456789988764322 4689999999999999997799999999999999999999999999998889
Q ss_pred ceEEEEEEec
Q psy4897 251 LVELEVKYLR 260 (774)
Q Consensus 251 ~V~L~V~R~~ 260 (774)
.+.|+|.|..
T Consensus 186 ~v~l~v~R~~ 195 (196)
T 1p1d_A 186 LVKLKIRKDE 195 (196)
T ss_dssp CEEEEEECCC
T ss_pred EEEEEEEeCC
Confidence 9999998754
No 6
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.87 E-value=2.4e-21 Score=230.67 Aligned_cols=181 Identities=39% Similarity=0.530 Sum_probs=152.5
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCC-----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 91 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~-----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lL 91 (774)
...+.++|.+.+.. ++|||+|.||.+. ..|++|+.|.+||||+++|+|++||+|++|||++|.+++|.+++.++
T Consensus 56 ~~~~~~~v~l~k~~-~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 134 (721)
T 2xkx_A 56 GEMEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEAL 134 (721)
T ss_pred CCceEEEEEEEeCC-CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 34467788887766 6999999999875 46899999999999999988999999999999999999999999999
Q ss_pred HhcCceEEEEeeecccccceeeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCcc
Q psy4897 92 KRAGKVVELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSV 171 (774)
Q Consensus 92 k~ag~~V~L~V~R~~~ks~~~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~ 171 (774)
+.+++.|+|+|.|.....
T Consensus 135 ~~~g~~v~l~v~R~~~~~-------------------------------------------------------------- 152 (721)
T 2xkx_A 135 KEAGSIVRLYVMRRKPPA-------------------------------------------------------------- 152 (721)
T ss_pred hccccccceEEEeccccc--------------------------------------------------------------
Confidence 999999999998754110
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 246 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk 246 (774)
.....+++.+. ..+|||++.++.+. ..+++|..|.++++|+++|+|++||+|++|||++|.++++.+++.+++
T Consensus 153 -~~~~~v~l~k~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 230 (721)
T 2xkx_A 153 -EKVMEIKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALK 230 (721)
T ss_pred -ccceeeeeeee-cCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHH
Confidence 01233444443 45689998875432 468999999999999999889999999999999999999999999999
Q ss_pred HcCcceEEEEEEeccc
Q psy4897 247 RAGKLVELEVKYLREV 262 (774)
Q Consensus 247 ~~g~~V~L~V~R~~~~ 262 (774)
..++.|.|+|.|.+..
T Consensus 231 ~~~~~v~l~V~R~g~~ 246 (721)
T 2xkx_A 231 NTYDVVYLKVAKPSNA 246 (721)
T ss_pred cCCCeEEEEEEeCCcc
Confidence 8889999999987653
No 7
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.87 E-value=3.6e-22 Score=196.15 Aligned_cols=165 Identities=28% Similarity=0.512 Sum_probs=136.4
Q ss_pred cccccceeeeeec-------cceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccccceEE
Q psy4897 105 GYGRCGTLETYVR-------GQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRI 177 (774)
Q Consensus 105 ~~~ks~~~~~~~~-------~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~~~r~ 177 (774)
...+++.++++++ ++|.++..+|.++.+.++.++... + |+
T Consensus 5 ~~~rsG~lel~~~~g~~~~~~~w~~V~~~L~~d~Ltl~~~d~~~------~-------------------~~-------- 51 (178)
T 2adz_A 5 RAPRTGLLELRCGAGSGAGGERWQRVLLSLAEDALTVSPADGEP------G-------------------PE-------- 51 (178)
T ss_dssp CCCEEEEEEECCCCSSSSSCCCCEEEEEEEETTEEEEESSSCCC------C-------------------SS--------
T ss_pred ccccceEEEEEeccccccCCCceEeeeeeeccceEEeecccccc------C-------------------CC--------
Confidence 3456777888777 899999999999999988655400 0 00
Q ss_pred EEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEE
Q psy4897 178 IRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVK 257 (774)
Q Consensus 178 V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~ 257 (774)
. +|.+ .+|.+|+++|.|++||.|++
T Consensus 52 -------~--------~ga~----------~~g~aad~tg~l~vgDAI~~------------------------------ 76 (178)
T 2adz_A 52 -------P--------EPAQ----------LNGAAEPGAAPPQLPEALLL------------------------------ 76 (178)
T ss_dssp -------C--------CCCC----------CCCCCCSCCSSCCCCSSTTT------------------------------
T ss_pred -------C--------CCcC----------CCCCcccccCCCCcchHHHH------------------------------
Confidence 0 1211 56788999999999999987
Q ss_pred EecccccccccCcccccccccccCCCCC-CCCCCCCCCCCCCCCcCcccceeeEeeecccccCCCCceEEEecCCCceeE
Q psy4897 258 YLREVTPYFRKASIISEVGWELQRGFLS-DSPPSPSPQSSQRADTRYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSC 336 (774)
Q Consensus 258 R~~~~~~~~~~~~~~~~l~w~~~~~~~~-~~~~~~~~~~~~~~~~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~ 336 (774)
.+++.+|+++++.+++++|+.+++... ..+..+.+++++|.|.+.|||+|||++|++.++|+|+|+|||+++||.+++
T Consensus 77 -~re~tpylkk~s~~~~~gw~~~~~~s~~~~~~s~~~~~~~~~D~~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~ 155 (178)
T 2adz_A 77 -QREVSPYFKNSAGGTSVGWDSPPASPLQRQPSSPGPQPRNLSEAKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAV 155 (178)
T ss_dssp -STTTSSCSSSCCCSSSCCCCCCSCCCCCCCSSSSCCCCCSSCSCEEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEE
T ss_pred -HhhccHhhccccCCCCcccccCCCCCcccCCCCCCCCCcccCcceeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeE
Confidence 788999999999999999998775433 233344556688999999999999999999999999999999999999999
Q ss_pred EEeeCChHhHHHHHHHHHHHhh
Q psy4897 337 ILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 337 ~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
||||+|.+++.+||+|||+||.
T Consensus 156 iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 156 FLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp EECCSSHHHHHHHHHHHHHHHT
T ss_pred EEEeCCHHHHHHHHHHHHHhcc
Confidence 9999999999999999999996
No 8
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.83 E-value=2.4e-19 Score=213.53 Aligned_cols=237 Identities=31% Similarity=0.416 Sum_probs=157.4
Q ss_pred cEEEEEEeecCCcccEEEEccCCC-----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcC
Q psy4897 21 FYSENYKYTENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG 95 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~-----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag 95 (774)
.++|++.+ +..+|||+|.+|.+. ..|++|..|.+||||+++|+|++||+|++|||++|.+++|.+++.+++.++
T Consensus 155 ~~~v~l~k-~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 233 (721)
T 2xkx_A 155 VMEIKLIK-GPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 233 (721)
T ss_pred ceeeeeee-ecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCC
Confidence 45667754 467899999987643 368999999999999999889999999999999999999999999999999
Q ss_pred ceEEEEeeecccccceeeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccccce
Q psy4897 96 KVVELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQK 175 (774)
Q Consensus 96 ~~V~L~V~R~~~ks~~~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~~~ 175 (774)
+.|.|+|.|++.... ...... ........ ....................+........++...............
T Consensus 234 ~~v~l~V~R~g~~~~-~~~~~~---p~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 308 (721)
T 2xkx_A 234 DVVYLKVAKPSNAYL-SDSYAP---PDITTSYS-QHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREP 308 (721)
T ss_pred CeEEEEEEeCCcccc-cCCCCC---CCcccCCC-CCcccccCCcccccccccccCCCCCCcccCCcccccccccccccce
Confidence 999999988753210 000000 00000000 0000000000000000000000000000000000000001122356
Q ss_pred EEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEE
Q psy4897 176 RIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELE 255 (774)
Q Consensus 176 r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~ 255 (774)
+.+.+.+. ..+|||.+.++.+ ..+++|..|.++++|+++|.|++||+|++|||++|.++++++++++|++.++.|+|+
T Consensus 309 ~~v~l~~~-~~~lG~~i~~~~~-~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~ 386 (721)
T 2xkx_A 309 RRIVIHRG-STGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII 386 (721)
T ss_pred EEEEEEEC-CCCccEEEeccCC-CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEE
Confidence 77888775 5789999987643 468999999999999999889999999999999999999999999999989999999
Q ss_pred EEEecccccc
Q psy4897 256 VKYLREVTPY 265 (774)
Q Consensus 256 V~R~~~~~~~ 265 (774)
|.|....+..
T Consensus 387 v~r~~~~~~~ 396 (721)
T 2xkx_A 387 AQYKPEEYSR 396 (721)
T ss_pred EEeCchhhhh
Confidence 9987765543
No 9
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.81 E-value=2.5e-18 Score=168.42 Aligned_cols=160 Identities=21% Similarity=0.306 Sum_probs=131.7
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh-cCce
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-AGKV 97 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~-ag~~ 97 (774)
..+++|.+.+...++|||++... ..+++|..|.|+|||+++| |++||+|++|||+++.++++..+..+++. .++.
T Consensus 3 ~~~r~v~l~k~~~~~lG~~~~~~---~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~ 78 (166)
T 1w9e_A 3 MDPREVILCKDQDGKIGLRLKSI---DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEK 78 (166)
T ss_dssp CCCEEEEEECCTTSCCSEEEEEE---TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSE
T ss_pred CCCEEEEEEeCCCCcEeEEEEeC---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCE
Confidence 35788999888889999999864 3689999999999999998 99999999999999999998777777766 4568
Q ss_pred EEEEeeecccccceeeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccccceEE
Q psy4897 98 VELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRI 177 (774)
Q Consensus 98 V~L~V~R~~~ks~~~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~~~r~ 177 (774)
+.|+|.+.. + .+.
T Consensus 79 v~l~vr~~~-~------------------------------------------------------------------~~~ 91 (166)
T 1w9e_A 79 ITMTIRDRP-F------------------------------------------------------------------ERT 91 (166)
T ss_dssp EEEEEECCT-T------------------------------------------------------------------CEE
T ss_pred EEEEEEcCC-C------------------------------------------------------------------cEE
Confidence 999993321 1 122
Q ss_pred EEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEE
Q psy4897 178 IRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVK 257 (774)
Q Consensus 178 V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~ 257 (774)
+.+.+.....+||.+.. + +|..|.+++||+++| |++||+|++|||+++.++++.++...++..++.+.+.+.
T Consensus 92 v~l~~~~~~~lG~~~~~------g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 92 ITMHKDSTGHVGFIFKN------G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp EEEECCTTSCCSEEEET------T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEE
T ss_pred EEEecCCCCcEeEEEeC------C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEE
Confidence 33332234568888762 3 899999999999998 999999999999999999999999889888888888775
No 10
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.81 E-value=7.7e-21 Score=210.91 Aligned_cols=168 Identities=19% Similarity=0.315 Sum_probs=78.3
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCC--CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKEN--KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~--~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
..+....+|.+.++++++|||+|.++... ..+++|..|.|||||+++|+|++||+|++|||+++.+++|.+++.+++.
T Consensus 200 ~~~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 279 (388)
T 3suz_A 200 SNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKG 279 (388)
T ss_dssp CCSSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTT
T ss_pred cccccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHh
Confidence 66778899999999899999999974321 2468999999999999998899999999999999999999999999988
Q ss_pred c--CceEEEEeeecccccceeeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCcc
Q psy4897 94 A--GKVVELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSV 171 (774)
Q Consensus 94 a--g~~V~L~V~R~~~ks~~~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~ 171 (774)
. +..|+|+|.|....
T Consensus 280 ~~~~~~v~l~v~r~~~~--------------------------------------------------------------- 296 (388)
T 3suz_A 280 LKNQTQVKLNIVSCPPV--------------------------------------------------------------- 296 (388)
T ss_dssp CTTCSCEEEEEEECCSC---------------------------------------------------------------
T ss_pred ccCCCcccccccccccc---------------------------------------------------------------
Confidence 5 45689998775310
Q ss_pred ccceEEEEE-eccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 172 ENQKRIIRV-KKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 172 ~~~~r~V~L-~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
+.+.+ .+.....+||.+.++ +|..|.++++|+++| |++||+|++|||++|.+.++++++++|++.++
T Consensus 297 ----~~v~l~~~~~~~~lG~~i~~g-------~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~ 364 (388)
T 3suz_A 297 ----TTVLIKRPDLKYQLGFSVQNG-------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVG 364 (388)
T ss_dssp ----C---------------------------------------------------------------------------
T ss_pred ----ceeeEeecCCCCccceEEecC-------EEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 00011 111235688887643 899999999999998 99999999999999999999999999999999
Q ss_pred ceEEEEEE
Q psy4897 251 LVELEVKY 258 (774)
Q Consensus 251 ~V~L~V~R 258 (774)
.+.|+|.+
T Consensus 365 ~v~L~V~p 372 (388)
T 3suz_A 365 EIHMKTMP 372 (388)
T ss_dssp --------
T ss_pred eEEEEEEe
Confidence 99998864
No 11
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.72 E-value=5.8e-17 Score=164.90 Aligned_cols=162 Identities=15% Similarity=0.081 Sum_probs=116.6
Q ss_pred cccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCC-CEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecccccce
Q psy4897 33 GLGISIKGGKENKMPILISKIFKGMAADQTEQLYVG-DAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGYGRCGT 111 (774)
Q Consensus 33 gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvG-D~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~~ks~~ 111 (774)
++|++...+.+...|++|..|.|+|||+++| |++| |+|++|||++|.++++.....+....++.|.|+|.|.... ..
T Consensus 3 g~~~~~~~~~~~~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~-~~ 80 (209)
T 3rle_A 3 GSSQSVEIPGGGTEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTL-EL 80 (209)
T ss_dssp -----CCCTTSSSEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTC-CE
T ss_pred chhhhhhccCCCCCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCc-eE
Confidence 5666776677777899999999999999998 9999 9999999999999988766555556788999999886411 00
Q ss_pred eeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccccceEEEEEeccCCCCcceE
Q psy4897 112 LETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRIIRVKKSENNGLGIS 191 (774)
Q Consensus 112 ~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~~~r~V~L~k~~~~~LGfs 191 (774)
. ..++. +... ......+|+.
T Consensus 81 ~-----------~v~l~-------p~~~------------------------------------------~~~~~~lGi~ 100 (209)
T 3rle_A 81 R-----------ETSVT-------PSNL------------------------------------------WGGQGLLGVS 100 (209)
T ss_dssp E-----------EEEEC-------CCSS------------------------------------------SSSSSSSCEE
T ss_pred E-----------EEEEc-------cccc------------------------------------------ccccCccceE
Confidence 0 00000 0000 0013456666
Q ss_pred EeCC---CCCCCCeEEEEecCCChhhhccCCCC-CCEEEEECCeecCCCCHHHHHHHHHH-cCcceEEEEEEec
Q psy4897 192 IKGG---KENKMPILISKIFKGMAADQTEQLYV-GDAILSVNGEDLREATHDEAVKALKR-AGKLVELEVKYLR 260 (774)
Q Consensus 192 i~gg---~~~~~pi~Is~V~pgspA~~aG~L~~-GD~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~V~L~V~R~~ 260 (774)
+... .....+++|..|.++|||+++| |++ ||+|++|||+ +.+ .+++.+++++ .++.+.|+|.|..
T Consensus 101 ~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~--~~~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 101 IRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNE--SEDLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp EEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCS--SSCHHHHHHHTTTSCEEEEEEETT
T ss_pred EeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCC--HHHHHHHHHhCCCCeEEEEEEECC
Confidence 6521 1112579999999999999998 999 9999999998 766 6788888887 5889999998854
No 12
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.65 E-value=2.9e-15 Score=168.62 Aligned_cols=156 Identities=21% Similarity=0.226 Sum_probs=111.7
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecccccceeeeeeccceeeee
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGYGRCGTLETYVRGQWYKVF 124 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~~ks~~~~~~~~~~~~~~~ 124 (774)
..|++|..|.++|||+++| |++||+|++|||++|.++.+..........++.|+|+|.|++.. ..+.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~-~~~~----------- 328 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKP-LEVE----------- 328 (436)
T ss_pred CcceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEE-EEEE-----------
Confidence 4689999999999999998 99999999999999998866655554445789999999987522 1111
Q ss_pred eecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccccceEEEEEeccCCCCcceEEeCC-----CCCC
Q psy4897 125 VSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRIIRVKKSENNGLGISIKGG-----KENK 199 (774)
Q Consensus 125 ~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~~~r~V~L~k~~~~~LGfsi~gg-----~~~~ 199 (774)
.++..... .. . . .. ...+|+..... ....
T Consensus 329 v~l~~~~~-----~~-------------~----~---------~~---------------~~~~gl~~~~~~~~~~~~~~ 362 (436)
T 4a8c_A 329 VTLDTSTS-----SS-------------A----S---------AE---------------MITPALEGATLSDGQLKDGG 362 (436)
T ss_pred EEECCCCc-----cc-------------c----c---------cc---------------ccccCceeeecccccccCCC
Confidence 11110000 00 0 0 00 00011111110 0123
Q ss_pred CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEeccc
Q psy4897 200 MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLREV 262 (774)
Q Consensus 200 ~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~~ 262 (774)
.+++|..|.+++||+++| |++||+|++|||+++.+ .+++.++|++.++.+.|+|.|.++.
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g~~ 422 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNS--IAEMRKVLAAKPAIIALQIVRGNES 422 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCeEEEEEEECCEE
Confidence 579999999999999998 99999999999999987 8999999998778999999987653
No 13
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.61 E-value=4.9e-15 Score=167.38 Aligned_cols=159 Identities=18% Similarity=0.136 Sum_probs=109.5
Q ss_pred CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecccccceeeeeeccceeeeee
Q psy4897 46 MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGYGRCGTLETYVRGQWYKVFV 125 (774)
Q Consensus 46 ~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~~ks~~~~~~~~~~~~~~~~ 125 (774)
.|++|..|.++|||+++| |++||+|++|||++|.++.+..........|+.|+|+|.|++.. ..+.+
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~-~~~~v----------- 348 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKP-LTLSA----------- 348 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEE-EEEEE-----------
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEE-EEEEE-----------
Confidence 689999999999999998 99999999999999998855544443345789999999987522 11111
Q ss_pred ecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccccceEEEEEeccCCCCcceEEeCC----CCCCCC
Q psy4897 126 SLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRIIRVKKSENNGLGISIKGG----KENKMP 201 (774)
Q Consensus 126 tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~~~r~V~L~k~~~~~LGfsi~gg----~~~~~p 201 (774)
++............ . .....++++..... .....+
T Consensus 349 ~l~~~~~~~~~~~~----------~-------------------------------~~~~~G~~l~~~~~~~~~~~~~~G 387 (451)
T 3pv2_A 349 VVTDIKSHEQKLQS----------N-------------------------------NPFLYGLALRAFEQESPPHGNVIG 387 (451)
T ss_dssp ECBCHHHHHHHHHH----------H-------------------------------STTTTTEEEEEEEEECTTSCEEEE
T ss_pred EEccCCcccccccc----------c-------------------------------cccccccccccCChhHhcccCCCc
Confidence 11100000000000 0 00001111111000 001246
Q ss_pred eEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEecc
Q psy4897 202 ILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 202 i~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
++|..|.++|||+++| |++||+|++|||++|.+ .+++.++|++.++.+.|+|.|.+.
T Consensus 388 v~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g~ 444 (451)
T 3pv2_A 388 VQVVGASENSAGWRAG-IRPGDIIISANKKPVTD--VKSLQTIAQEKKKELLVQVLRGPG 444 (451)
T ss_dssp EEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHTTSSCSCEEEEEEETTE
T ss_pred eEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhcCCCeEEEEEEECCE
Confidence 8999999999999998 99999999999999987 789999999888899999998754
No 14
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.57 E-value=1.4e-14 Score=127.29 Aligned_cols=86 Identities=69% Similarity=0.942 Sum_probs=80.3
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
...++|++.+.++.+|||+|.+|.+...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.+++.+
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v 82 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEV 82 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 46789999999999999999999887789999999999999999559999999999999999999999999999999999
Q ss_pred EEEeee
Q psy4897 99 ELEVGV 104 (774)
Q Consensus 99 ~L~V~R 104 (774)
+|+|.|
T Consensus 83 ~l~v~r 88 (90)
T 1qav_A 83 VLEVKY 88 (90)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999976
No 15
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.56 E-value=1.7e-14 Score=125.59 Aligned_cols=77 Identities=21% Similarity=0.307 Sum_probs=71.5
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
+.++|++.|.+.++|||++.+| +|..|.+++||+++| |++||+|++|||++|.+++|++++.+|+.++..|+
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g-------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~ 75 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG-------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVT 75 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT-------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred ceEEEEEEECCCCCeEEEEECC-------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEE
Confidence 5688999999899999999876 378999999999998 99999999999999999999999999999999999
Q ss_pred EEeee
Q psy4897 100 LEVGV 104 (774)
Q Consensus 100 L~V~R 104 (774)
|+|..
T Consensus 76 L~v~p 80 (82)
T 1r6j_A 76 ITIMP 80 (82)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99863
No 16
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.54 E-value=2.3e-14 Score=129.54 Aligned_cols=88 Identities=44% Similarity=0.597 Sum_probs=80.7
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
..+++|++.++++.+|||+|.+|.+...+++|..|.++|||+++++|++||+|++|||++|.++++.+++.+++.++..|
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v 87 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI 87 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEE
T ss_pred CCcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 45788999999999999999999887779999999999999997459999999999999999999999999999999999
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
+|+|.+..
T Consensus 88 ~l~v~~~~ 95 (103)
T 2dc2_A 88 EFEVVYVA 95 (103)
T ss_dssp EEEEEECC
T ss_pred EEEEEecC
Confidence 99998754
No 17
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.54 E-value=2.7e-14 Score=124.50 Aligned_cols=85 Identities=46% Similarity=0.644 Sum_probs=78.0
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
++++|++.+.+..+|||++.+|.+...+++|..|.|+|||+++++|++||+|++|||+++.++++.+++.+++.+++.++
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 81 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 81 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 57889999999999999999998877889999999999999953499999999999999999999999999999999999
Q ss_pred EEeee
Q psy4897 100 LEVGV 104 (774)
Q Consensus 100 L~V~R 104 (774)
|+|.+
T Consensus 82 l~v~~ 86 (87)
T 4e34_A 82 FEVVY 86 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88853
No 18
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.54 E-value=1.5e-14 Score=134.62 Aligned_cols=92 Identities=35% Similarity=0.517 Sum_probs=76.1
Q ss_pred ccCCCCcEEEEEEeecCCcccEEEEccCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy4897 15 FFSSRDFYSENYKYTENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 91 (774)
Q Consensus 15 ~~~s~~~~~V~l~rk~~~gLGfsI~GG~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lL 91 (774)
......+++|+|.|.+..+|||+|.+|.+. ..+++|..|.|+|||+++|+|++||+|++|||++|.++++.+++.++
T Consensus 19 ~s~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l 98 (120)
T 2iwo_A 19 YFQSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLL 98 (120)
T ss_dssp ------CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred CCCCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 455677899999888888999999998763 35899999999999999966999999999999999999999999999
Q ss_pred HhcCceEEEEeeecc
Q psy4897 92 KRAGKVVELEVGVGY 106 (774)
Q Consensus 92 k~ag~~V~L~V~R~~ 106 (774)
+.++..|+|+|.|..
T Consensus 99 ~~~~~~v~l~v~r~g 113 (120)
T 2iwo_A 99 KNASGSIEMQVVAGG 113 (120)
T ss_dssp HHCCSEEEEEEECCT
T ss_pred HcCCCeEEEEEEECC
Confidence 999999999998875
No 19
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.52 E-value=8.6e-14 Score=122.92 Aligned_cols=88 Identities=38% Similarity=0.529 Sum_probs=78.4
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCC-----CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENK-----MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 92 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~-----~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk 92 (774)
|.++++|+|.+. +.+|||+|.+|.+.+ .+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++
T Consensus 1 s~~~~~v~l~k~-~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (94)
T 2fe5_A 1 SMTIMEVNLLKG-PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLK 79 (94)
T ss_dssp CCCEEEEEEECC-TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred CcEEEEEEEEEC-CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 467889999765 678999999987643 48999999999999999889999999999999999999999999999
Q ss_pred hcCceEEEEeeecc
Q psy4897 93 RAGKVVELEVGVGY 106 (774)
Q Consensus 93 ~ag~~V~L~V~R~~ 106 (774)
.++..|.|+|.|+.
T Consensus 80 ~~~~~v~l~v~R~g 93 (94)
T 2fe5_A 80 NTSDMVYLKVAKPG 93 (94)
T ss_dssp TCCSEEEEEEECCC
T ss_pred cCCCeEEEEEEcCC
Confidence 98889999998753
No 20
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.52 E-value=4e-14 Score=131.48 Aligned_cols=91 Identities=26% Similarity=0.408 Sum_probs=81.3
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 92 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk 92 (774)
......+.|.+.+.+..+|||+|.+|.+. ..|++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 20 ~~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 99 (118)
T 3b76_A 20 FQSMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLK 99 (118)
T ss_dssp CEEEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHH
T ss_pred cCCCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 44556677888877789999999999743 468999999999999999889999999999999999999999999999
Q ss_pred hcCceEEEEeeecc
Q psy4897 93 RAGKVVELEVGVGY 106 (774)
Q Consensus 93 ~ag~~V~L~V~R~~ 106 (774)
.+++.|+|+|.|..
T Consensus 100 ~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 100 RTSSSIVLKALEVK 113 (118)
T ss_dssp SCCSEEEEEEEEEE
T ss_pred cCCCeEEEEEEECC
Confidence 99999999998754
No 21
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.52 E-value=7.7e-14 Score=126.80 Aligned_cols=84 Identities=39% Similarity=0.548 Sum_probs=72.3
Q ss_pred EEEEeecCCcccEEEEccCCCCC-----CeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 24 ENYKYTENNGLGISIKGGKENKM-----PILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 24 V~l~rk~~~gLGfsI~GG~e~~~-----gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
..+...++.+|||+|.||.+... +++|.+|.++|||+++|+|++||+|++|||++|.++++.+++.++++++..|
T Consensus 5 ~~~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v 84 (106)
T 4amh_A 5 HHLVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFV 84 (106)
T ss_dssp -------CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEE
T ss_pred cccCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeE
Confidence 45667889999999999988653 8999999999999999889999999999999999999999999999999999
Q ss_pred EEEeeeccc
Q psy4897 99 ELEVGVGYG 107 (774)
Q Consensus 99 ~L~V~R~~~ 107 (774)
+|+|.|+..
T Consensus 85 ~l~v~R~~~ 93 (106)
T 4amh_A 85 YLKVAKPGS 93 (106)
T ss_dssp EEEEECCSS
T ss_pred EEEEEeCCC
Confidence 999998753
No 22
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.52 E-value=2.9e-14 Score=130.02 Aligned_cols=89 Identities=27% Similarity=0.354 Sum_probs=79.7
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCC--CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc-
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKEN--KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA- 94 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~--~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a- 94 (774)
+.++++|.|.+++..+|||+|.+|.+. ..+++|.+|.++|||+++|+|++||+|++|||+++.+++|.+++.+++.+
T Consensus 3 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 82 (108)
T 3cbz_A 3 HMNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIV 82 (108)
T ss_dssp -CCEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHH
T ss_pred CceEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 457889999888889999999998654 46899999999999999988999999999999999999999999999987
Q ss_pred --CceEEEEeeecc
Q psy4897 95 --GKVVELEVGVGY 106 (774)
Q Consensus 95 --g~~V~L~V~R~~ 106 (774)
+..|+|+|.|..
T Consensus 83 ~~~~~v~l~v~R~~ 96 (108)
T 3cbz_A 83 HKPGPIVLTVAKSG 96 (108)
T ss_dssp TSSSCEEEEEECCC
T ss_pred cCCCeEEEEEEeCC
Confidence 457999998864
No 23
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.52 E-value=7.9e-14 Score=126.16 Aligned_cols=87 Identities=38% Similarity=0.526 Sum_probs=78.3
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCC-----CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENK-----MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~-----~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
.++++|++.+.+ .+|||+|.||.+.. .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 2 e~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 2 EKIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp -CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred CeEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 467889997665 79999999987643 489999999999999998899999999999999999999999999999
Q ss_pred cCceEEEEeeecc
Q psy4897 94 AGKVVELEVGVGY 106 (774)
Q Consensus 94 ag~~V~L~V~R~~ 106 (774)
+++.|.|+|.|+.
T Consensus 81 ~~~~v~l~v~R~~ 93 (105)
T 2awx_A 81 TSDFVYLKVAKPT 93 (105)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 9999999998865
No 24
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.51 E-value=6.4e-14 Score=122.75 Aligned_cols=85 Identities=28% Similarity=0.416 Sum_probs=76.3
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEE
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVEL 100 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L 100 (774)
+.++++..+.+.+|||+|.+|.+...+++|..|.|+|||+++| |++||+|++|||+++.++++.+++.+++.+++.+.|
T Consensus 2 ~~~~~v~~~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 80 (89)
T 2q3g_A 2 MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSL 80 (89)
T ss_dssp EEEEEEEEESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEE
T ss_pred ccEEEEEEcCCCcccEEEECcCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEE
Confidence 3445555567899999999998877899999999999999998 999999999999999999999999999998999999
Q ss_pred Eeeecc
Q psy4897 101 EVGVGY 106 (774)
Q Consensus 101 ~V~R~~ 106 (774)
+|.|+.
T Consensus 81 ~v~R~~ 86 (89)
T 2q3g_A 81 GLSRAI 86 (89)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 998864
No 25
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.51 E-value=7.6e-14 Score=124.35 Aligned_cols=88 Identities=30% Similarity=0.369 Sum_probs=79.5
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCC------CeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKM------PILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 92 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~------gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk 92 (774)
..+++|++.|.+..+|||+|.+|.+... +++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++
T Consensus 4 e~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 4 ELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp CEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 3467889988899999999999876543 8999999999999999779999999999999999999999999999
Q ss_pred hcCceEEEEeeecc
Q psy4897 93 RAGKVVELEVGVGY 106 (774)
Q Consensus 93 ~ag~~V~L~V~R~~ 106 (774)
.+++.+.|+|.|+.
T Consensus 84 ~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 84 EADFKIELEIQTFD 97 (98)
T ss_dssp HSCSEEEEEEEEC-
T ss_pred cCCCeEEEEEEeCC
Confidence 99999999998864
No 26
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.50 E-value=1.4e-13 Score=121.17 Aligned_cols=87 Identities=38% Similarity=0.505 Sum_probs=79.0
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
.+.++|++.+.+..+|||+|.++.+ ..|++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++.+++.+
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 81 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRN-DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTV 81 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSS-SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred ceEEEEEEEeCCCCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3578899999889999999998754 468999999999999999889999999999999999999999999999999999
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|..
T Consensus 82 ~l~v~R~~ 89 (92)
T 2qg1_A 82 TLEVGRIS 89 (92)
T ss_dssp EEEEECCC
T ss_pred EEEEEccc
Confidence 99998764
No 27
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.50 E-value=9.9e-14 Score=121.16 Aligned_cols=84 Identities=27% Similarity=0.424 Sum_probs=75.6
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
..++|++ +++.+|||+|.+|.+...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..++.+.
T Consensus 3 ~~~~v~l--~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 79 (88)
T 2uzc_A 3 SNYSVSL--VGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLN 79 (88)
T ss_dssp CEEEEEE--ESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred cEEEEEE--cCCCcccEEEECcCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 3455555 67789999999998877899999999999999998 99999999999999999999999999998899999
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|+.
T Consensus 80 l~v~R~g 86 (88)
T 2uzc_A 80 MTLQRES 86 (88)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9998764
No 28
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.50 E-value=1.4e-13 Score=122.09 Aligned_cols=87 Identities=22% Similarity=0.345 Sum_probs=78.7
Q ss_pred CCcEEEEEEee-cCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 19 RDFYSENYKYT-ENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 19 ~~~~~V~l~rk-~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
.++++|++.|. .+.+|||+|.++.+ ..|++|.+|.++|||+++|.|++||+|++|||+++.++++.+++..++.+++.
T Consensus 2 ~~~~~v~l~k~~~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 80 (95)
T 2vwr_A 2 MEILQVALHKRDSGEQLGIKLVRRTD-EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGER 80 (95)
T ss_dssp EEEEEEEEECSSTTCCCCEEEEECSS-SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred cEEEEEEEEECCCCCcccEEEEeccC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 36788999886 56899999998765 45899999999999999988999999999999999999999999999999999
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
+.|+|.|+.
T Consensus 81 v~l~v~R~~ 89 (95)
T 2vwr_A 81 VNLTIARPG 89 (95)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEcCC
Confidence 999998865
No 29
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.50 E-value=1.1e-13 Score=125.56 Aligned_cols=89 Identities=33% Similarity=0.416 Sum_probs=78.6
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCC--------CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHH
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKEN--------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVK 89 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~--------~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~ 89 (774)
....++|++.|. +.+|||+|.++.+. ..+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.
T Consensus 6 ~~~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~ 84 (107)
T 1uhp_A 6 SGKSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVE 84 (107)
T ss_dssp SSEEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHH
T ss_pred CcEEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 346777888665 89999999998753 468999999999999999559999999999999999999999999
Q ss_pred HHHhcCceEEEEeeeccc
Q psy4897 90 ALKRAGKVVELEVGVGYG 107 (774)
Q Consensus 90 lLk~ag~~V~L~V~R~~~ 107 (774)
+++.+++.|.|+|.|..+
T Consensus 85 ~~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 85 AFKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHHHCCSSEEEEEEECCS
T ss_pred HHHcCCCcEEEEEEeCCC
Confidence 999999999999988653
No 30
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.49 E-value=1.5e-13 Score=125.12 Aligned_cols=90 Identities=27% Similarity=0.304 Sum_probs=79.1
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCC----CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKE----NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 91 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e----~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lL 91 (774)
.-+.++++|.+.+. +.+|||+|.+|.+ ...+++|..|.+++||+++|+|++||+|++|||++|.++++.+++.++
T Consensus 11 ~~~~~~~~v~l~k~-~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 89 (108)
T 2d92_A 11 LWSPEVKIVELVKD-CKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEIL 89 (108)
T ss_dssp SSCSSCEEEEEEEC-SSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred ccCCceEEEEEEEC-CCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34567889999776 4799999999876 346899999999999999988999999999999999999999999999
Q ss_pred Hhc-CceEEEEeeecc
Q psy4897 92 KRA-GKVVELEVGVGY 106 (774)
Q Consensus 92 k~a-g~~V~L~V~R~~ 106 (774)
+.+ +..|+|+|.|..
T Consensus 90 ~~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 90 KAVPPGLVHLGICSGP 105 (108)
T ss_dssp HHSCSEEEEEEEECCC
T ss_pred HhCCCCeEEEEEEcCC
Confidence 995 678999998753
No 31
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=1.5e-13 Score=121.13 Aligned_cols=88 Identities=39% Similarity=0.515 Sum_probs=78.9
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
+..+++|++.+ ...+|||+|.++.+...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.+++.
T Consensus 3 ~~~~r~v~l~k-~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 81 (93)
T 2dkr_A 3 SGSSGVVELPK-TDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGS 81 (93)
T ss_dssp SSCSCEEEEEC-CTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSE
T ss_pred CCCCEEEEEEe-CCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 34577888865 56999999999987778999999999999999966999999999999999999999999999998889
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
|.|+|.|+.
T Consensus 82 v~l~v~r~~ 90 (93)
T 2dkr_A 82 VKLVVRSGP 90 (93)
T ss_dssp EEEEECCCC
T ss_pred EEEEEEeCC
Confidence 999998754
No 32
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.49 E-value=1.9e-13 Score=122.59 Aligned_cols=86 Identities=36% Similarity=0.482 Sum_probs=77.7
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCC-----CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENK-----MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~-----~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
..++|++.+.+ .+|||+|.+|.+.+ .+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.+
T Consensus 7 ~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 7 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred ccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 56778887655 99999999988753 6899999999999999988999999999999999999999999999999
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|.|+|.|+.
T Consensus 86 g~~v~l~v~R~~ 97 (101)
T 2jik_A 86 GYAVSLRVQHRL 97 (101)
T ss_dssp CSEEEEEEEEES
T ss_pred CCeEEEEEEeCC
Confidence 999999998865
No 33
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.49 E-value=2.1e-13 Score=122.49 Aligned_cols=86 Identities=42% Similarity=0.527 Sum_probs=77.9
Q ss_pred CcEEEEEEeecCCcccEEEEccCCC-----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~-----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
++++|.+.+ +..+|||+|.+|.+. ..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.+
T Consensus 4 ~~~~v~l~k-~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 82 (102)
T 2i1n_A 4 KYEEIVLER-GNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA 82 (102)
T ss_dssp EEEEEEEEC-BTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred eEEEEEEEE-CCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 567788865 578999999998764 35899999999999999988999999999999999999999999999999
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|.|+|.|+.
T Consensus 83 g~~v~l~v~R~~ 94 (102)
T 2i1n_A 83 GPVVRLVVRRRQ 94 (102)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEeCC
Confidence 999999998875
No 34
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.49 E-value=1.4e-13 Score=120.12 Aligned_cols=84 Identities=23% Similarity=0.376 Sum_probs=77.4
Q ss_pred EEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEE
Q psy4897 22 YSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELE 101 (774)
Q Consensus 22 ~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~ 101 (774)
.++++.++++.+|||+|.+|.+...+++|..|.|+|||+++| |++||+|++|||+++.++++.++..+++..++.+.|+
T Consensus 2 ~~~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 80 (87)
T 2pa1_A 2 MALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQ 80 (87)
T ss_dssp EEEEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEE
T ss_pred cEEEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 367788889999999999998877799999999999999997 9999999999999999999999999999988899999
Q ss_pred eeecc
Q psy4897 102 VGVGY 106 (774)
Q Consensus 102 V~R~~ 106 (774)
|.|+.
T Consensus 81 v~R~~ 85 (87)
T 2pa1_A 81 LDRIT 85 (87)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98864
No 35
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.49 E-value=1.7e-13 Score=126.64 Aligned_cols=93 Identities=25% Similarity=0.233 Sum_probs=84.4
Q ss_pred cccCCCCcEEEEEEeecCCcccEEEEccCCCCC-CeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH
Q psy4897 14 FFFSSRDFYSENYKYTENNGLGISIKGGKENKM-PILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 92 (774)
Q Consensus 14 ~~~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~-gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk 92 (774)
........+.|.+.+..+.+|||+|.++.+... +++|.+|.+++||+++|+|++||+|++|||++|.+.++.+++.+++
T Consensus 9 ~~~~~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~ 88 (117)
T 1v62_A 9 TVANASGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLA 88 (117)
T ss_dssp SSCCSSSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHH
T ss_pred cccCCCCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 346677899999999888999999999876544 4999999999999999889999999999999999999999999999
Q ss_pred hcCceEEEEeeecc
Q psy4897 93 RAGKVVELEVGVGY 106 (774)
Q Consensus 93 ~ag~~V~L~V~R~~ 106 (774)
++++.|+|+|.|..
T Consensus 89 ~~g~~v~l~v~r~~ 102 (117)
T 1v62_A 89 SISEKVRLEILPVP 102 (117)
T ss_dssp SCSSEEEEEECCBT
T ss_pred hCCCeEEEEEEECC
Confidence 99999999998865
No 36
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.48 E-value=1.4e-13 Score=126.92 Aligned_cols=91 Identities=35% Similarity=0.384 Sum_probs=82.4
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCC---------CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHH
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKEN---------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDE 86 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~---------~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~e 86 (774)
....++++|.|.+.++.+|||+|.||.+. ..+++|..|.++|||+++|+|++||+|++|||++|.++++.+
T Consensus 11 ~~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 90 (117)
T 2ehr_A 11 SHWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSE 90 (117)
T ss_dssp SCBCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHH
T ss_pred ccCCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 44567899999888889999999998764 268999999999999999889999999999999999999999
Q ss_pred HHHHHHhcCceEEEEeeecc
Q psy4897 87 AVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 87 aV~lLk~ag~~V~L~V~R~~ 106 (774)
++.+++.+++.|.|+|.|..
T Consensus 91 ~~~~~~~~g~~v~l~v~r~~ 110 (117)
T 2ehr_A 91 AVEAIKNAGNPVVFIVQSLS 110 (117)
T ss_dssp HHHHHHTSCSSEEEEECCBS
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 99999999999999998764
No 37
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.48 E-value=1.6e-13 Score=127.09 Aligned_cols=90 Identities=41% Similarity=0.528 Sum_probs=80.0
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCC-----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHH
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 90 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~-----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~l 90 (774)
.+..++++|.+.+. ..+|||+|.+|.+. ..+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+
T Consensus 20 ~~~~~~~~v~l~k~-~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 98 (117)
T 2byg_A 20 FQSMTVVEIKLFKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAI 98 (117)
T ss_dssp CEEEEEEEEEEECB-TTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred cCCCceEEEEEEeC-CCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 44557788888765 49999999998764 3589999999999999998899999999999999999999999999
Q ss_pred HHhcCceEEEEeeecc
Q psy4897 91 LKRAGKVVELEVGVGY 106 (774)
Q Consensus 91 Lk~ag~~V~L~V~R~~ 106 (774)
++.+++.|+|+|.|+.
T Consensus 99 l~~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 99 LKNTSEVVYLKVGKPT 114 (117)
T ss_dssp HHTCCSEEEEEEEEEE
T ss_pred HHcCCCeEEEEEEeCC
Confidence 9999999999998864
No 38
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.48 E-value=2.3e-13 Score=121.31 Aligned_cols=83 Identities=24% Similarity=0.284 Sum_probs=72.4
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc--Cce
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GKV 97 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a--g~~ 97 (774)
+.++|.+.|. ..+|||+|.++. ...+||++|.+||+|+++|.|++||+|++|||++|.+++|.+++++|+.+ +..
T Consensus 5 ~~k~V~l~K~-~~~LG~tI~~~g--~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~ 81 (95)
T 3gge_A 5 IEKEVNVYKS-EDSLGLTITDNG--VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEEL 81 (95)
T ss_dssp EEEEEEEECC-SSCCCEEEECSS--SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCE
T ss_pred eEEEEEEEEC-CCCceEEEEcCC--CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCE
Confidence 4578888775 499999999642 34589999999999999999999999999999999999999999999995 558
Q ss_pred EEEEeeec
Q psy4897 98 VELEVGVG 105 (774)
Q Consensus 98 V~L~V~R~ 105 (774)
++|.+.++
T Consensus 82 ~~L~lv~p 89 (95)
T 3gge_A 82 FTMKLIEP 89 (95)
T ss_dssp EEEEEEEE
T ss_pred EEEEEECc
Confidence 88888764
No 39
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.48 E-value=2.1e-13 Score=119.53 Aligned_cols=84 Identities=31% Similarity=0.384 Sum_probs=74.8
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc--eE
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK--VV 98 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~--~V 98 (774)
.++|++.+. ..+|||+|.+|.+...+++|..|.++|||+++|.|++||+|++|||+++.+.++.+++.+++.++. .|
T Consensus 3 ~~~v~l~~~-~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v 81 (90)
T 2q9v_A 3 EQDIFLWRK-ETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHV 81 (90)
T ss_dssp EEEEEEECB-TTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEE
T ss_pred cEEEEEEEC-CCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 456777655 478999999998877889999999999999998899999999999999999999999999998754 89
Q ss_pred EEEeeec
Q psy4897 99 ELEVGVG 105 (774)
Q Consensus 99 ~L~V~R~ 105 (774)
.|+|.|.
T Consensus 82 ~l~v~R~ 88 (90)
T 2q9v_A 82 NLTVRQT 88 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9999875
No 40
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.48 E-value=2.7e-13 Score=126.55 Aligned_cols=85 Identities=24% Similarity=0.282 Sum_probs=79.0
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEE
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVEL 100 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L 100 (774)
..+|++.+...++|||+|.||.+...+++|..|.+||||+++|+|++||+|++|||+++.+++|.+++.+++.++..|+|
T Consensus 20 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~l 99 (125)
T 3hpk_A 20 PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTI 99 (125)
T ss_dssp EEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEE
T ss_pred CeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 45678888888999999999988778999999999999999988999999999999999999999999999999999999
Q ss_pred Eeeec
Q psy4897 101 EVGVG 105 (774)
Q Consensus 101 ~V~R~ 105 (774)
+|.|.
T Consensus 100 ~v~r~ 104 (125)
T 3hpk_A 100 HYNKL 104 (125)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99874
No 41
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.48 E-value=2.4e-13 Score=119.58 Aligned_cols=85 Identities=26% Similarity=0.413 Sum_probs=77.2
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEE
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVEL 100 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L 100 (774)
+.+..+..+.+.+|||++.+|.+...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++.+++.+.|
T Consensus 2 ~~~~~v~~~~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l 80 (91)
T 2pkt_A 2 MTTQQIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTL 80 (91)
T ss_dssp EEEEEEEEESSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEE
T ss_pred CccEEEEECCCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4455666667899999999998877899999999999999998 999999999999999999999999999999999999
Q ss_pred Eeeecc
Q psy4897 101 EVGVGY 106 (774)
Q Consensus 101 ~V~R~~ 106 (774)
+|.|+.
T Consensus 81 ~v~R~g 86 (91)
T 2pkt_A 81 TVARSE 86 (91)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 999875
No 42
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.47 E-value=3.6e-13 Score=119.46 Aligned_cols=88 Identities=33% Similarity=0.530 Sum_probs=78.6
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
..+.++|.+.+ .+.+|||+|.+|.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.+
T Consensus 3 ~g~~~~v~l~k-~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 81 (96)
T 1d5g_A 3 PGDIFEVELAK-NDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT 81 (96)
T ss_dssp TTCEEEEEEEC-SSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred CCCEEEEEEEe-CCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45778888865 468999999998764 35899999999999999987999999999999999999999999999999
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|.|+|.|+.
T Consensus 82 g~~v~l~v~R~~ 93 (96)
T 1d5g_A 82 GQVVHLLLEKGQ 93 (96)
T ss_dssp CSEEEEEEECCS
T ss_pred CCeEEEEEEcCC
Confidence 999999998764
No 43
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.47 E-value=1.3e-13 Score=124.89 Aligned_cols=89 Identities=31% Similarity=0.507 Sum_probs=79.7
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhC-CCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTE-QLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG-~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
.....++.+.+.+...++|||+|.+|.+...+++|..|.++|||+++| +|++||+|++|||++|.+++|.+++.+++.+
T Consensus 13 ~~~~~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 13 IPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp ---CCCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CCCCCEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 456778999998888899999999998877789999999999999998 4999999999999999999999999999998
Q ss_pred Cc----eEEEEeee
Q psy4897 95 GK----VVELEVGV 104 (774)
Q Consensus 95 g~----~V~L~V~R 104 (774)
++ .|.|+|.|
T Consensus 93 ~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 93 CERHSGELMLLVRP 106 (107)
T ss_dssp GGSBTTBEEEEEEC
T ss_pred cccCCcEEEEEEEc
Confidence 75 89999876
No 44
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.47 E-value=2.8e-13 Score=124.18 Aligned_cols=91 Identities=30% Similarity=0.613 Sum_probs=79.5
Q ss_pred ccCCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 15 FFSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 15 ~~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
..+..++++|.+.+. ..+|||+|.+|.+...+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++.+
T Consensus 19 ~~~~~~~~~v~l~~~-~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 97 (112)
T 2r4h_A 19 YFQSMDFYTVELERG-AKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNG 97 (112)
T ss_dssp ----CCEEEEEEECB-TTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred ccCCCceEEEEEEcC-CCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 356778889999654 5789999999987778999999999999999977999999999999999999999999999999
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|.|+|.|+.
T Consensus 98 g~~v~l~v~R~~ 109 (112)
T 2r4h_A 98 GRRVRLFLKRGE 109 (112)
T ss_dssp TTEEEEEEECCE
T ss_pred CCeEEEEEEeCC
Confidence 999999998764
No 45
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=1.1e-13 Score=124.89 Aligned_cols=86 Identities=27% Similarity=0.379 Sum_probs=77.6
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc--Cce
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GKV 97 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a--g~~ 97 (774)
..++|++.+ +..+|||+|.+|.+...+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++.+ ++.
T Consensus 9 ~~~~v~l~~-~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~ 87 (103)
T 1uep_A 9 KELDVHLRR-MESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQ 87 (103)
T ss_dssp EEECCEEES-SSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred eEEEEEEEe-CCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCc
Confidence 456667765 67899999999988778999999999999999988999999999999999999999999999987 789
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
|+|+|.|+.
T Consensus 88 v~l~v~R~~ 96 (103)
T 1uep_A 88 VNLTVRRKV 96 (103)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999998864
No 46
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=1.1e-13 Score=128.28 Aligned_cols=95 Identities=36% Similarity=0.496 Sum_probs=78.7
Q ss_pred ccccccCCCCcEEEEEEeecCCcccEEEEccCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHH
Q psy4897 11 TEAFFFSSRDFYSENYKYTENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEA 87 (774)
Q Consensus 11 ~~~~~~~s~~~~~V~l~rk~~~gLGfsI~GG~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~ea 87 (774)
...+.......++|+|.|.. .+|||+|.+|.+. ..+++|..|.|+|||+++|+|++||+|++|||++|.++++.++
T Consensus 16 ~~~~~~~~~~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~ 94 (117)
T 2fne_A 16 ENLYFQSMPQCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEA 94 (117)
T ss_dssp -------CCEEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred ccccccCCCccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 33444556677888886655 8999999998754 3589999999999999998899999999999999999999999
Q ss_pred HHHHHhcCceEEEEeeecc
Q psy4897 88 VKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 88 V~lLk~ag~~V~L~V~R~~ 106 (774)
+.+++.++..|+|+|.|..
T Consensus 95 ~~~l~~~~~~v~l~v~R~g 113 (117)
T 2fne_A 95 VAILKRTKGTVTLMVLSSD 113 (117)
T ss_dssp HHHHHHCCSSEEEEEEECS
T ss_pred HHHHHcCCCeEEEEEEeCC
Confidence 9999998888999998865
No 47
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.47 E-value=4.2e-13 Score=119.48 Aligned_cols=87 Identities=32% Similarity=0.465 Sum_probs=77.8
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
.++++|.+ ++..++|||+|.++.+...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.+++.|
T Consensus 4 ~~~~~v~l-~~~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v 82 (97)
T 1n7e_A 4 AIIYTVEL-KRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETV 82 (97)
T ss_dssp CCEEEEEE-ECTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred ceEEEEEE-EeCCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 45677888 55678899999988766679999999999999999779999999999999999999999999999889999
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|+.
T Consensus 83 ~l~v~R~~ 90 (97)
T 1n7e_A 83 TLKIKKQT 90 (97)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99998865
No 48
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=3e-13 Score=125.35 Aligned_cols=90 Identities=34% Similarity=0.419 Sum_probs=80.2
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCC-----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHH
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 90 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~-----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~l 90 (774)
......++|+|.+.. .+|||+|.+|.+. ..+++|..|.+++||+++|+|++||+|++|||++|.+++|.+++.+
T Consensus 13 ~~~~~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 91 (120)
T 2eno_A 13 DYLVTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDL 91 (120)
T ss_dssp CEEEEEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHH
T ss_pred CCCCceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344567788887655 9999999998774 5689999999999999998899999999999999999999999999
Q ss_pred HHhcCceEEEEeeecc
Q psy4897 91 LKRAGKVVELEVGVGY 106 (774)
Q Consensus 91 Lk~ag~~V~L~V~R~~ 106 (774)
++.+++.|.|+|.|+.
T Consensus 92 ~~~~g~~v~l~v~R~~ 107 (120)
T 2eno_A 92 FRNAGYAVSLRVQHRL 107 (120)
T ss_dssp HHHHCSEEEEEEEEEE
T ss_pred HHcCCCeEEEEEEeCC
Confidence 9999999999998865
No 49
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.46 E-value=2e-13 Score=123.57 Aligned_cols=85 Identities=31% Similarity=0.387 Sum_probs=75.0
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCe-EEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh-----c
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPI-LISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-----A 94 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi-~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~-----a 94 (774)
.+.|.+ +++..+|||+|.||.+...++ +|..|.+++||+++|+|++||+|++|||+++.+++|++++.+|+. .
T Consensus 7 ~~~v~l-~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~ 85 (103)
T 1ufx_A 7 GTLVRV-KKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKD 85 (103)
T ss_dssp SEEEEE-ECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSS
T ss_pred eEEEEE-EcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCC
Confidence 455666 677899999999998876554 999999999999998899999999999999999999999999998 4
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.+.|.|.|..
T Consensus 86 ~~~i~l~v~r~~ 97 (103)
T 1ufx_A 86 RDYIDFLVTEFN 97 (103)
T ss_dssp CSEEEEEECCCC
T ss_pred CCeEEEEEEEcc
Confidence 778899998764
No 50
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.46 E-value=4.5e-13 Score=121.04 Aligned_cols=88 Identities=28% Similarity=0.400 Sum_probs=80.1
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
.....++|++.+.++++|||+|.++.+...+++|..|.+++||+++| |++||+|++|||++|.++++.+++.+++. ++
T Consensus 12 ~~~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~ 89 (104)
T 1wi2_A 12 TQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-AR 89 (104)
T ss_dssp CSSCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SS
T ss_pred CCCCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CC
Confidence 34456889998888899999999988777899999999999999998 99999999999999999999999999998 78
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.+.|+|.|..
T Consensus 90 ~v~l~v~r~~ 99 (104)
T 1wi2_A 90 EISMRVRFFS 99 (104)
T ss_dssp SEEEEEECCC
T ss_pred EEEEEEEECC
Confidence 8999998754
No 51
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.46 E-value=3.2e-13 Score=118.58 Aligned_cols=85 Identities=19% Similarity=0.321 Sum_probs=75.3
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
.++.|.+.|.++.+|||+|.++. ..+++|.+|.+||||+++++|++||+|++|||+++.++++++++.+++..+..|+
T Consensus 1 ~~r~V~l~K~~~~~lG~~i~~~~--~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~ 78 (88)
T 1kwa_A 1 RSRLVQFQKNTDEPMGITLKMNE--LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSIT 78 (88)
T ss_dssp CCEEEEEEECSSSCCCEEEECSC--GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEE
T ss_pred CeEEEEEEeCCCCceeEEEEeCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEE
Confidence 36789999998999999999742 2579999999999999955699999999999999999999999999999877899
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|..
T Consensus 79 l~v~r~~ 85 (88)
T 1kwa_A 79 FKIVPSY 85 (88)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9997753
No 52
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.46 E-value=4.8e-13 Score=115.99 Aligned_cols=82 Identities=26% Similarity=0.379 Sum_probs=72.6
Q ss_pred EEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc--CceEE
Q psy4897 22 YSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GKVVE 99 (774)
Q Consensus 22 ~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a--g~~V~ 99 (774)
++|++.+ +..+|||++.+|.+...+++|..|.|+|||+++|.|++||+|++|||+++.++++.++..+++.. ++.+.
T Consensus 2 ~~v~l~k-~~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 80 (85)
T 2i04_A 2 IHTKLRK-SSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVD 80 (85)
T ss_dssp EEEEEEC-BTTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEE
T ss_pred EEEEEEE-CCCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEE
Confidence 3566654 56799999999877777899999999999999987999999999999999999999999999986 78899
Q ss_pred EEeee
Q psy4897 100 LEVGV 104 (774)
Q Consensus 100 L~V~R 104 (774)
|+|.|
T Consensus 81 l~v~R 85 (85)
T 2i04_A 81 LELCR 85 (85)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88864
No 53
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.46 E-value=3.6e-13 Score=119.83 Aligned_cols=86 Identities=26% Similarity=0.366 Sum_probs=75.6
Q ss_pred CCCcEEEEEEeecCCcccEEEEc-------cCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHH
Q psy4897 18 SRDFYSENYKYTENNGLGISIKG-------GKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 90 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~G-------G~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~l 90 (774)
+...++|++.|.+..+|||+|.+ +.+...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+
T Consensus 2 ~~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 80 (96)
T 2ego_A 2 SQQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDI 80 (96)
T ss_dssp CCCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34568899999888999999997 33345689999999999999998 99999999999999999999999999
Q ss_pred HHhcCceEEEEeee
Q psy4897 91 LKRAGKVVELEVGV 104 (774)
Q Consensus 91 Lk~ag~~V~L~V~R 104 (774)
++..+..|.|+|.+
T Consensus 81 l~~~~~~v~l~v~~ 94 (96)
T 2ego_A 81 IKASGNVLRLETLY 94 (96)
T ss_dssp HHHTTTEEEEEEEC
T ss_pred HHhCCCeEEEEEEE
Confidence 99988899999865
No 54
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.46 E-value=3.1e-13 Score=120.12 Aligned_cols=86 Identities=30% Similarity=0.464 Sum_probs=77.1
Q ss_pred CcEEEEEEeecCCcccEEEEccCCC----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcC
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKEN----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG 95 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag 95 (774)
+.++|++.+ ++.+|||+|.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.++
T Consensus 3 ~~~~v~l~k-~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 81 (97)
T 2jil_A 3 RTVEVTLHK-EGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 81 (97)
T ss_dssp EEEEEEEEC-BTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred eEEEEEEEe-CCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 466778854 678999999998754 368999999999999999879999999999999999999999999999999
Q ss_pred ceEEEEeeecc
Q psy4897 96 KVVELEVGVGY 106 (774)
Q Consensus 96 ~~V~L~V~R~~ 106 (774)
+.+.|+|.|+.
T Consensus 82 ~~v~l~v~R~~ 92 (97)
T 2jil_A 82 QEAALLIEYDV 92 (97)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 99999999865
No 55
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.46 E-value=5e-13 Score=118.10 Aligned_cols=87 Identities=24% Similarity=0.374 Sum_probs=76.1
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
+..++.|.+.+. +.+|||+|.++ +...+++|.+|.++|||+++|.|++||+|++|||+++.+.++.+++.+++.++..
T Consensus 2 ~~~~r~v~l~k~-~~~lG~~i~~~-~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 79 (93)
T 3o46_A 2 SDSVKIIRLVKN-REPLGATIKKD-EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGA 79 (93)
T ss_dssp --CCEEEEEEES-SSCCCEEEEEC-TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEE
T ss_pred CccEEEEEEEeC-CCCccEEEEec-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 356788899876 56999999986 4456899999999999999988999999999999999999999999999999889
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
|+|+|.+..
T Consensus 80 v~l~v~~~~ 88 (93)
T 3o46_A 80 ITFKIIPGS 88 (93)
T ss_dssp EEEEEECC-
T ss_pred EEEEEEeCC
Confidence 999997653
No 56
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.46 E-value=5.5e-13 Score=117.11 Aligned_cols=86 Identities=16% Similarity=0.175 Sum_probs=76.9
Q ss_pred CCCcEEEEEEeecC-CcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 18 SRDFYSENYKYTEN-NGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 18 s~~~~~V~l~rk~~-~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
..++++|++.+.+. .+|||+|.++... .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..++
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~~-~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 81 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLLE-KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGN 81 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTTS-SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTT
T ss_pred CcceEEEEEEECCCCCCccEEEEeccCC-CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45678889988766 6899999987653 689999999999999998 99999999999999999999999999999899
Q ss_pred eEEEEeeec
Q psy4897 97 VVELEVGVG 105 (774)
Q Consensus 97 ~V~L~V~R~ 105 (774)
.+.|+|.|+
T Consensus 82 ~v~l~v~R~ 90 (91)
T 1m5z_A 82 KLDLVISRN 90 (91)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEeC
Confidence 999999774
No 57
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.46 E-value=3.8e-13 Score=122.96 Aligned_cols=89 Identities=22% Similarity=0.282 Sum_probs=77.3
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCCC--CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKENK--MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~--~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
....+++.|++.+. .+|||+|.||.+.. .+++|.+|.+++||+++|+|++||+|++|||+++.+++|.+++.+|+.
T Consensus 11 ~~~~~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~ 88 (109)
T 1wi4_A 11 DRDPAFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITR 88 (109)
T ss_dssp CCCTTEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHH
T ss_pred CCCCcEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 44567778888553 89999999997643 479999999999999998899999999999999999999999999998
Q ss_pred cC----ceEEEEeeecc
Q psy4897 94 AG----KVVELEVGVGY 106 (774)
Q Consensus 94 ag----~~V~L~V~R~~ 106 (774)
+. ..++|.|.|+.
T Consensus 89 ~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 89 AKLRSESPWEIAFIRSG 105 (109)
T ss_dssp SCCSSSSCEEEEEECCC
T ss_pred cccCCCceEEEEEEeCC
Confidence 65 67888888865
No 58
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.46 E-value=1.8e-13 Score=118.66 Aligned_cols=81 Identities=32% Similarity=0.486 Sum_probs=73.1
Q ss_pred EEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEE
Q psy4897 22 YSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELE 101 (774)
Q Consensus 22 ~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~ 101 (774)
++|++ +.+.+|||+|.+|.+...+++|..|.|+|||+++| |++||+|++|||+++.++++.+++.+++.+++.+.|+
T Consensus 3 ~~v~l--~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~ 79 (85)
T 1rgw_A 3 YSVTL--TGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLT 79 (85)
T ss_dssp EEEEE--CCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEE
T ss_pred EEEEE--eCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEE
Confidence 44555 56789999999998877899999999999999987 9999999999999999999999999999888889999
Q ss_pred eeec
Q psy4897 102 VGVG 105 (774)
Q Consensus 102 V~R~ 105 (774)
|.|+
T Consensus 80 v~R~ 83 (85)
T 1rgw_A 80 LQKS 83 (85)
T ss_dssp EESC
T ss_pred EEeC
Confidence 9875
No 59
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.46 E-value=1.9e-13 Score=128.17 Aligned_cols=91 Identities=22% Similarity=0.338 Sum_probs=82.3
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCCC---CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecC-CCCHHHHHHHH
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKENK---MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLR-EATHDEAVKAL 91 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~---~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~-~~sh~eaV~lL 91 (774)
.....+++|++.+....+|||+|.+|.+.. .|++|..|.+++||+++|+|++||+|++|||++|. ++++.+++.++
T Consensus 21 ~~~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l 100 (128)
T 2db5_A 21 AQGRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALL 100 (128)
T ss_dssp HTTCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHH
T ss_pred cccCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 346678889998888899999999987653 48999999999999999889999999999999998 99999999999
Q ss_pred HhcCceEEEEeeecc
Q psy4897 92 KRAGKVVELEVGVGY 106 (774)
Q Consensus 92 k~ag~~V~L~V~R~~ 106 (774)
+.+++.|.|+|.|+.
T Consensus 101 ~~~~~~v~l~v~r~~ 115 (128)
T 2db5_A 101 QQTTGSLRLIVAREP 115 (128)
T ss_dssp HHCCSEEEEEEEECC
T ss_pred HcCCCeEEEEEEcCC
Confidence 999999999998864
No 60
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=1.8e-13 Score=126.42 Aligned_cols=88 Identities=31% Similarity=0.369 Sum_probs=78.2
Q ss_pred CCcEEEEEEeec------CCcccEEEEccCCCC-----CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHH
Q psy4897 19 RDFYSENYKYTE------NNGLGISIKGGKENK-----MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEA 87 (774)
Q Consensus 19 ~~~~~V~l~rk~------~~gLGfsI~GG~e~~-----~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~ea 87 (774)
-...+|++.+.. +.+|||+|.|+.+.+ .+++|..|.++|||+++|+|++||+|++|||++|.+++|.++
T Consensus 11 ~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~ 90 (117)
T 1ujd_A 11 FPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEV 90 (117)
T ss_dssp SCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHH
T ss_pred CceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHH
Confidence 345677777766 589999999987643 489999999999999998899999999999999999999999
Q ss_pred HHHHHhcCceEEEEeeecc
Q psy4897 88 VKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 88 V~lLk~ag~~V~L~V~R~~ 106 (774)
+.+++.+++.|.|+|.|+.
T Consensus 91 ~~~l~~~~~~v~l~v~R~~ 109 (117)
T 1ujd_A 91 QSIISQQSGEAEICVRLDL 109 (117)
T ss_dssp HHHHSCCSSCEEEEEESSC
T ss_pred HHHHhcCCCEEEEEEEECC
Confidence 9999999999999998865
No 61
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.45 E-value=3.3e-13 Score=127.66 Aligned_cols=88 Identities=18% Similarity=0.319 Sum_probs=79.1
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCC------------CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHH
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENK------------MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHD 85 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~------------~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~ 85 (774)
....++|++.|++.++|||+|.++.+.. .|++|..|.+||||+++| |++||+|++|||++|.++++.
T Consensus 25 ~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~ 103 (132)
T 3l4f_D 25 IIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHR 103 (132)
T ss_dssp CCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHH
T ss_pred CCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence 3456689999989999999999987632 379999999999999998 999999999999999999999
Q ss_pred HHHHHHHhcCceEEEEeeecc
Q psy4897 86 EAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 86 eaV~lLk~ag~~V~L~V~R~~ 106 (774)
+++.+++++++.|.|+|.+..
T Consensus 104 ~~~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 104 QVVNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHHHHTTTEEEEEEECCC
T ss_pred HHHHHHHcCCCEEEEEEEECC
Confidence 999999999999999998754
No 62
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.45 E-value=1.7e-13 Score=126.22 Aligned_cols=90 Identities=28% Similarity=0.442 Sum_probs=82.3
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecC-CCCHHHHHHHHH
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLR-EATHDEAVKALK 92 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~-~~sh~eaV~lLk 92 (774)
...++++|.+.+.++.+|||+|.++.+. ..|++|..|.++|||+++|+|++||+|++|||++|. ++++.+++.+++
T Consensus 17 ~~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~ 96 (117)
T 2o2t_A 17 QGRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQ 96 (117)
T ss_dssp TTSCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHH
T ss_pred cCCeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 4578999999998899999999998743 358999999999999999889999999999999998 999999999999
Q ss_pred hcCceEEEEeeecc
Q psy4897 93 RAGKVVELEVGVGY 106 (774)
Q Consensus 93 ~ag~~V~L~V~R~~ 106 (774)
.+++.|.|+|.|+.
T Consensus 97 ~~~~~v~l~v~R~~ 110 (117)
T 2o2t_A 97 KAKDTVQLVIARGS 110 (117)
T ss_dssp HCCSEEEEEEESSC
T ss_pred cCCCEEEEEEEeCC
Confidence 99999999998875
No 63
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.45 E-value=1.3e-13 Score=129.95 Aligned_cols=88 Identities=30% Similarity=0.451 Sum_probs=77.3
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCC---CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKE---NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e---~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
..++++|++.+ +..+|||+|.||.+ ...+++|.+|.+|+||+++|+|++||+|++|||++|.+++|.+++.+++.+
T Consensus 27 ~~~~~~v~l~k-~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 105 (130)
T 1i16_A 27 EATVCTVTLEK-MSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL 105 (130)
T ss_dssp SEEEEEEEEET-TSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS
T ss_pred CCcEEEEEEEc-CCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45677788865 47899999999987 356899999999999999967999999999999999999999999999998
Q ss_pred C-ceEEEEeeecc
Q psy4897 95 G-KVVELEVGVGY 106 (774)
Q Consensus 95 g-~~V~L~V~R~~ 106 (774)
+ ..|.|+|.|..
T Consensus 106 ~~~~v~l~v~r~~ 118 (130)
T 1i16_A 106 PDGPVTIVIRRKS 118 (130)
T ss_dssp CSSEEEEEEEEES
T ss_pred CCceEEEEEEeCC
Confidence 5 46999998764
No 64
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.45 E-value=5.3e-13 Score=120.79 Aligned_cols=87 Identities=32% Similarity=0.501 Sum_probs=76.6
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCC---CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKE---NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e---~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
..+.++|++ ++..+|||+|.+|.+ ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.+
T Consensus 9 ~~~~~~v~l--~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 86 (106)
T 3axa_A 9 EPEIITVTL--KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRT 86 (106)
T ss_dssp -CCEEEEEE--ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CceEEEEEE--CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 445566666 678999999998754 345899999999999999988999999999999999999999999999999
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|.|+|.|+.
T Consensus 87 g~~v~l~v~R~~ 98 (106)
T 3axa_A 87 SSVVTLEVAKQG 98 (106)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEeCC
Confidence 999999998875
No 65
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=1.8e-13 Score=126.62 Aligned_cols=91 Identities=31% Similarity=0.495 Sum_probs=81.7
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhh-CCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQT-EQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAara-G~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
.....+++|++.+...++|||+|.+|.+...+++|..|.++|||+++ |+|++||+|++|||++|.+++|.+++.+++.+
T Consensus 11 ~~~~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~ 90 (119)
T 2cs5_A 11 IPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 90 (119)
T ss_dssp CCSSCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHH
T ss_pred cCCCCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 44567889999888888999999999887778999999999999999 45999999999999999999999999999988
Q ss_pred Cc----eEEEEeeecc
Q psy4897 95 GK----VVELEVGVGY 106 (774)
Q Consensus 95 g~----~V~L~V~R~~ 106 (774)
+. .|.|+|.|+.
T Consensus 91 ~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 91 CERHSGELMLLVRPNA 106 (119)
T ss_dssp HHCCSSCEEEEEECCC
T ss_pred cccCCCEEEEEEEccc
Confidence 54 8999998864
No 66
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.44 E-value=4.2e-13 Score=124.07 Aligned_cols=94 Identities=26% Similarity=0.370 Sum_probs=80.9
Q ss_pred ccccCCCCcEEEEEEeecCCcccEEEEccCCC-CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy4897 13 AFFFSSRDFYSENYKYTENNGLGISIKGGKEN-KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 91 (774)
Q Consensus 13 ~~~~~s~~~~~V~l~rk~~~gLGfsI~GG~e~-~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lL 91 (774)
.......+++.|.+.+++..+|||+|.++.+. ..|++|..|.+++||+++|+|++||+|++|||++|.++++.+++.++
T Consensus 8 ~~~~~~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 87 (119)
T 1x6d_A 8 ATLKQLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAIL 87 (119)
T ss_dssp CSCSSCTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHH
T ss_pred hhcCCCCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 33455677888888888999999999998874 57899999999999999988999999999999999999999999999
Q ss_pred HhcCceE-EEEeeecc
Q psy4897 92 KRAGKVV-ELEVGVGY 106 (774)
Q Consensus 92 k~ag~~V-~L~V~R~~ 106 (774)
+.++..+ .++|.|+.
T Consensus 88 ~~~~~~~~~l~v~R~~ 103 (119)
T 1x6d_A 88 RQAREPRQAVIVTRKL 103 (119)
T ss_dssp HHTTSSSEEEEEEECC
T ss_pred HhCCCCeEEEEEEcCC
Confidence 9876554 46776654
No 67
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.44 E-value=7.9e-13 Score=117.39 Aligned_cols=85 Identities=38% Similarity=0.507 Sum_probs=75.5
Q ss_pred CcEEEEEEeecCCcccEEEEccCC------CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKE------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e------~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
+-+.+.+.+. .++|||+|.+|.+ ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.
T Consensus 3 ~~~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 80 (97)
T 2w4f_A 3 EELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG 80 (97)
T ss_dssp CEEEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eEEEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 4456677554 8899999999876 34789999999999999998 99999999999999999999999999988
Q ss_pred cCceEEEEeeecc
Q psy4897 94 AGKVVELEVGVGY 106 (774)
Q Consensus 94 ag~~V~L~V~R~~ 106 (774)
+++.|.|+|.|++
T Consensus 81 ~g~~v~l~v~R~g 93 (97)
T 2w4f_A 81 AGTAVQMRVWRER 93 (97)
T ss_dssp SCSEEEEEEECCS
T ss_pred CCCeEEEEEEeCC
Confidence 9999999999875
No 68
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.43 E-value=8.3e-13 Score=119.79 Aligned_cols=90 Identities=26% Similarity=0.368 Sum_probs=79.1
Q ss_pred CCCCcEEEEEE-eecCCcccEEEEccCCC-----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHH
Q psy4897 17 SSRDFYSENYK-YTENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 90 (774)
Q Consensus 17 ~s~~~~~V~l~-rk~~~gLGfsI~GG~e~-----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~l 90 (774)
...+.++|++. +++..+|||+|.++.+. ..+++|..|.++|||+++|.|++||+|++|||++|.++++.+++.+
T Consensus 9 ~~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 88 (108)
T 2jre_A 9 SGFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEV 88 (108)
T ss_dssp SSCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHH
T ss_pred cCcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34456777887 47789999999988653 3589999999999999998899999999999999999999999999
Q ss_pred HHhcCceEEEEeeecc
Q psy4897 91 LKRAGKVVELEVGVGY 106 (774)
Q Consensus 91 Lk~ag~~V~L~V~R~~ 106 (774)
++.+++.|.|+|.|+.
T Consensus 89 l~~~g~~v~l~v~R~~ 104 (108)
T 2jre_A 89 LRNAGNPVRLLLIRRL 104 (108)
T ss_dssp HHHHCSEEEEEEEECC
T ss_pred HHcCCCeEEEEEEeCC
Confidence 9999999999998865
No 69
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.43 E-value=6.6e-13 Score=117.91 Aligned_cols=86 Identities=20% Similarity=0.328 Sum_probs=76.2
Q ss_pred CCcEEEEEEeecCCcccEEEEc--cCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 19 RDFYSENYKYTENNGLGISIKG--GKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~G--G~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
...+.|.+.+.. .+|||++.+ |.+...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..++
T Consensus 2 ~~~r~v~l~k~~-~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (96)
T 2v90_A 2 MKPRCLHLEKGP-QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGS 79 (96)
T ss_dssp CCCEEEEEECBT-TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCCEEEEEEeCC-CcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456788886654 599999998 44455689999999999999998 99999999999999999999999999999899
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|+.
T Consensus 80 ~v~l~v~r~~ 89 (96)
T 2v90_A 80 CVSLTVVDPE 89 (96)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEECCC
Confidence 9999998875
No 70
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.43 E-value=3.3e-13 Score=124.53 Aligned_cols=88 Identities=28% Similarity=0.501 Sum_probs=78.4
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCC------CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHH
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKEN------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 90 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~------~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~l 90 (774)
...+.++|++.+..+.+|||+|.+|.+. ..+++|.+|.+++||+ +| |++||+|++|||++|.+++|.+++.+
T Consensus 11 ~~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~ 88 (117)
T 2csj_A 11 VIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQ 88 (117)
T ss_dssp EEEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHH
T ss_pred ccceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHH
Confidence 3446778888888789999999999764 4589999999999997 65 99999999999999999999999999
Q ss_pred HHhcCceEEEEeeecc
Q psy4897 91 LKRAGKVVELEVGVGY 106 (774)
Q Consensus 91 Lk~ag~~V~L~V~R~~ 106 (774)
++.+++.|.|+|.|..
T Consensus 89 l~~~~~~v~l~v~R~~ 104 (117)
T 2csj_A 89 LRKSGKIAAIVVKRPR 104 (117)
T ss_dssp HHHSCSEEEEEEEEEE
T ss_pred HhcCCCeEEEEEEECC
Confidence 9999999999998864
No 71
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.43 E-value=1.4e-12 Score=116.13 Aligned_cols=86 Identities=36% Similarity=0.508 Sum_probs=76.6
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCC-CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENK-MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~-~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
..++|++.+ ...+|||+|.++.+.. .+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.+++.|
T Consensus 4 ~~~~v~l~~-~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (98)
T 2opg_A 4 CETTIEISK-GRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRV 82 (98)
T ss_dssp EEEEEEEEC-BTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CEEEEEEEE-CCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 346677755 5789999999987765 68999999999999999889999999999999999999999999999988999
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|+.
T Consensus 83 ~l~v~R~~ 90 (98)
T 2opg_A 83 RLTLYRDE 90 (98)
T ss_dssp EEEEEECS
T ss_pred EEEEEcCC
Confidence 99998865
No 72
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.42 E-value=1.2e-12 Score=119.09 Aligned_cols=85 Identities=19% Similarity=0.345 Sum_probs=76.6
Q ss_pred cEEEEEEeecCCcccEEEEccCCCC------------CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHH
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENK------------MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAV 88 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~------------~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV 88 (774)
.++|.+.++..++|||+|.++.+.. .|++|..|.++|||+++| |++||+|++|||++|.+++|.+++
T Consensus 8 ~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 8 EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHH
T ss_pred cEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 4578888889999999999887632 379999999999999998 999999999999999999999999
Q ss_pred HHHHhcCceEEEEeeecc
Q psy4897 89 KALKRAGKVVELEVGVGY 106 (774)
Q Consensus 89 ~lLk~ag~~V~L~V~R~~ 106 (774)
.+++.+++.+.|+|.|..
T Consensus 87 ~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHTTTEEEEEEEEEE
T ss_pred HHHHhCCCEEEEEEEECC
Confidence 999998999999998754
No 73
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=4.1e-13 Score=118.99 Aligned_cols=84 Identities=29% Similarity=0.362 Sum_probs=75.0
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
..++|++ +...+|||++.+|.+...+++|..|.|++||+++| |++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 8 ~~~~v~l--~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 84 (94)
T 2eeg_A 8 MPHSVTL--RGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLT 84 (94)
T ss_dssp CCEEEEE--CCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEE
T ss_pred ceEEEEE--eCCCccCEEEECccCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 3445555 56689999999999887899999999999999998 99999999999999999999999999999899999
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|+.
T Consensus 85 l~v~R~g 91 (94)
T 2eeg_A 85 LSVSSGP 91 (94)
T ss_dssp EEEECCS
T ss_pred EEEEeCC
Confidence 9998764
No 74
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.42 E-value=7.7e-13 Score=124.88 Aligned_cols=88 Identities=28% Similarity=0.305 Sum_probs=76.1
Q ss_pred CcEEEEEEee---------cCCcccEEEEccCCCC---CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHH
Q psy4897 20 DFYSENYKYT---------ENNGLGISIKGGKENK---MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEA 87 (774)
Q Consensus 20 ~~~~V~l~rk---------~~~gLGfsI~GG~e~~---~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~ea 87 (774)
.+..+++.+. ...+|||+|.||.+.. .+++|..|.+++||+++|+|++||+|++|||++|.+++|.++
T Consensus 27 ~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~ 106 (131)
T 1wfg_A 27 LIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEV 106 (131)
T ss_dssp EEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHH
T ss_pred eeeEEEEeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 3445555555 6889999999987653 489999999999999998899999999999999999999999
Q ss_pred HHHHHhcC--ceEEEEeeeccc
Q psy4897 88 VKALKRAG--KVVELEVGVGYG 107 (774)
Q Consensus 88 V~lLk~ag--~~V~L~V~R~~~ 107 (774)
+.+++.++ +.|.|+|.|+..
T Consensus 107 ~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 107 YNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp HHHHHHTSSSSEEEEEEEEECS
T ss_pred HHHHHhcCCCCEEEEEEEcCCC
Confidence 99999864 899999998753
No 75
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.42 E-value=1.1e-12 Score=116.24 Aligned_cols=81 Identities=27% Similarity=0.350 Sum_probs=70.5
Q ss_pred EEEEeecCCcccEEEEccCC--------CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcC
Q psy4897 24 ENYKYTENNGLGISIKGGKE--------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG 95 (774)
Q Consensus 24 V~l~rk~~~gLGfsI~GG~e--------~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag 95 (774)
+++....+.+|||+|.||.+ ...+++|..|.|+|||++ | |++||+|++|||+++.++++.+++.+++.++
T Consensus 5 ~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (95)
T 1mfg_A 5 IRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ 82 (95)
T ss_dssp EEEEEECSSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred EEEEECCCCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcCC
Confidence 34444445599999999874 346899999999999999 6 9999999999999999999999999999999
Q ss_pred ceEEEEeeecc
Q psy4897 96 KVVELEVGVGY 106 (774)
Q Consensus 96 ~~V~L~V~R~~ 106 (774)
+.+.|+|.|+.
T Consensus 83 ~~v~l~v~R~~ 93 (95)
T 1mfg_A 83 NTVELIIVREV 93 (95)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 99999998853
No 76
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.42 E-value=1.3e-12 Score=114.54 Aligned_cols=85 Identities=20% Similarity=0.230 Sum_probs=75.0
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
...+.|++.+. ..+|||++.++.+ ..|++|..|.++|||+++| |++||+|++|||+++.+++|.++..+++..++.|
T Consensus 3 ~~~r~v~l~k~-~~g~G~~~~~~~~-~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 79 (90)
T 2he4_A 3 LRPRLCHLRKG-PQGYGFNLHSDKS-RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEA 79 (90)
T ss_dssp TCCEEEEEECB-TTBCCEEEEECSS-SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEE
T ss_pred CCcEEEEEEEC-CCCccEEEEccCC-CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 34667787654 4699999998765 4689999999999999998 9999999999999999999999999999999999
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|..
T Consensus 80 ~l~v~r~~ 87 (90)
T 2he4_A 80 RLLVVGPS 87 (90)
T ss_dssp EEEEECCC
T ss_pred EEEEEccC
Confidence 99998864
No 77
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.42 E-value=7.9e-13 Score=130.47 Aligned_cols=87 Identities=26% Similarity=0.446 Sum_probs=76.2
Q ss_pred CCCcEEEEEEeecCCcccEEEEc---cCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy4897 18 SRDFYSENYKYTENNGLGISIKG---GKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 91 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~G---G~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lL 91 (774)
..++++|++.+.. .+|||+|.+ |.+. ..+++|..|.+||||+++|+|++||+|++|||++|.+++|.+++.+|
T Consensus 78 ~~~~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l 156 (170)
T 3egg_C 78 RLELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 156 (170)
T ss_dssp TSEEEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHH
T ss_pred CceEEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4566778886655 699999998 4332 25799999999999999999999999999999999999999999999
Q ss_pred HhcCceEEEEeeec
Q psy4897 92 KRAGKVVELEVGVG 105 (774)
Q Consensus 92 k~ag~~V~L~V~R~ 105 (774)
+.++..|+|+|.|+
T Consensus 157 ~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 157 RNTKGRVRFMIGRE 170 (170)
T ss_dssp HHCCSEEEEEEEEC
T ss_pred HcCCCEEEEEEEeC
Confidence 99999999999873
No 78
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.42 E-value=3.8e-13 Score=121.25 Aligned_cols=86 Identities=27% Similarity=0.369 Sum_probs=78.1
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
+.+.++|++. .+.+|||+|.+|.+...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.+++.
T Consensus 3 ~g~~~~v~l~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 79 (103)
T 1wf7_A 3 SGSSGSVSLV--GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGS 79 (103)
T ss_dssp CCCCEEEEEE--SSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSE
T ss_pred CCCEEEEEEe--CCCccCEEEeccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4566777775 6789999999998877789999999999999998 999999999999999999999999999999999
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
+.|+|.|+.
T Consensus 80 v~l~v~R~g 88 (103)
T 1wf7_A 80 LNMTLQRAS 88 (103)
T ss_dssp EEEEECCCS
T ss_pred EEEEEEeCC
Confidence 999998865
No 79
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.42 E-value=4e-13 Score=122.27 Aligned_cols=84 Identities=21% Similarity=0.306 Sum_probs=76.6
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
+.++|.+.++...+|||++.+ ...|++|.+|.+||||+++|+|++||+|++|||++|.++++.+++.+++.++..|.
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~---~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~ 78 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVS 78 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEE---CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEE
T ss_pred eEEEEEEEeCCCCccCEEEEe---CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Confidence 467889988999999999987 24689999999999999998899999999999999999999999999999988999
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|..
T Consensus 79 l~v~R~~ 85 (106)
T 2la8_A 79 MEVTRPK 85 (106)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 9998864
No 80
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.42 E-value=9.2e-13 Score=119.31 Aligned_cols=86 Identities=28% Similarity=0.464 Sum_probs=77.8
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCC------CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKEN------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 92 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~------~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk 92 (774)
.+.++|++.+.++.+|||+|.++.+. ..+++|..|.++|||+ +| |++||+|++|||+++.++++.+++..++
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLR 83 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhh
Confidence 35788999888889999999998774 3589999999999999 76 9999999999999999999999999999
Q ss_pred hcCceEEEEeeecc
Q psy4897 93 RAGKVVELEVGVGY 106 (774)
Q Consensus 93 ~ag~~V~L~V~R~~ 106 (774)
++++.+.|+|.|+.
T Consensus 84 ~~g~~v~l~v~R~~ 97 (107)
T 2h2b_A 84 KSGKNAKITIRRKK 97 (107)
T ss_dssp TCCSEEEEEEEEES
T ss_pred CCCCEEEEEEEECC
Confidence 89999999998865
No 81
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.42 E-value=8.1e-13 Score=117.71 Aligned_cols=87 Identities=22% Similarity=0.301 Sum_probs=77.9
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
+.-+.++|.+.++...+|||++.+ ...|++|.+|.++|||+++|+|++||+|++|||++|.++++.+++.+++.++.
T Consensus 5 ~~~~~~~v~l~~~~~~glG~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~ 81 (96)
T 2qkv_A 5 NSLEKFNVDLMKKAGKELGLSLSP---NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANG 81 (96)
T ss_dssp CCCCCEEEEEECBTTBCCCEEEEE---CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSS
T ss_pred HHCceEEEEEEeCCCCCccEEEEe---CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 344677888988889999999987 24689999999999999997799999999999999999999999999999989
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|..
T Consensus 82 ~v~l~v~R~~ 91 (96)
T 2qkv_A 82 KVSMEVTRPK 91 (96)
T ss_dssp EEEEEEECCC
T ss_pred cEEEEEEeCC
Confidence 9999998864
No 82
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=5e-13 Score=120.86 Aligned_cols=89 Identities=37% Similarity=0.487 Sum_probs=77.7
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCC------CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHH
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKEN------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 90 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~------~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~l 90 (774)
.+.+.++|++.+ ...+|||+|.+|.+. ..+++|..|.++|||+++|.|++||+|++|||++|.++++.+++.+
T Consensus 4 ~~~~~~~v~l~~-~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 82 (105)
T 1wha_A 4 GSSGRHVACLAR-SERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSL 82 (105)
T ss_dssp CCCEEEEEEECC-CTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred CCCeeEEEEEEe-CCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 345566777754 566799999998763 3689999999999999998899999999999999999999999999
Q ss_pred HHhcCceEEEEeeecc
Q psy4897 91 LKRAGKVVELEVGVGY 106 (774)
Q Consensus 91 Lk~ag~~V~L~V~R~~ 106 (774)
++.+++.|.|+|.|+.
T Consensus 83 l~~~g~~v~l~v~R~~ 98 (105)
T 1wha_A 83 LTAASPTIALLLEREA 98 (105)
T ss_dssp HTSCCSCEEEEEEECC
T ss_pred HHcCCCeEEEEEEECC
Confidence 9998999999998864
No 83
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=3.2e-13 Score=121.26 Aligned_cols=89 Identities=26% Similarity=0.377 Sum_probs=79.6
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
...++.++.+.+++..+|||+|.+|.+...+++|..|.++|||+++|+|++||+|++|||+++.++ +.+++.+++.+++
T Consensus 6 ~~~~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~ 84 (100)
T 2edp_A 6 SGGSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFR 84 (100)
T ss_dssp CCCCCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCS
T ss_pred CCCCcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCC
Confidence 345667788888888899999999988777899999999999999955999999999999999997 8999999999889
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|+.
T Consensus 85 ~v~l~v~R~~ 94 (100)
T 2edp_A 85 ILKLIVRRRN 94 (100)
T ss_dssp SCEEEEEECC
T ss_pred eEEEEEEeCC
Confidence 9999998875
No 84
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=1.2e-12 Score=122.06 Aligned_cols=87 Identities=29% Similarity=0.429 Sum_probs=77.7
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCc
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGK 96 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~ 96 (774)
.+.++|++.+ +..+|||+|.+|.+...+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+|+. .++
T Consensus 18 ~~~~~v~l~~-~~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~ 96 (123)
T 1ueq_A 18 GTFLSTTLKK-SNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQ 96 (123)
T ss_dssp SEEEEEEEEC-CTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred CcEEEEEEEe-CCCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 3566777755 5779999999988877889999999999999998899999999999999999999999999998 578
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|+.
T Consensus 97 ~v~l~v~R~~ 106 (123)
T 1ueq_A 97 SVNLVLCRGY 106 (123)
T ss_dssp EEEEEEEESC
T ss_pred eEEEEEEeCC
Confidence 9999998865
No 85
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=1.3e-12 Score=119.03 Aligned_cols=89 Identities=26% Similarity=0.367 Sum_probs=79.1
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
...+.++|++.+. ..+|||+|.+|.+. ..+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++.
T Consensus 5 ~~~~~~~v~l~~~-~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 83 (110)
T 1um1_A 5 SSGYVFTVELERG-PSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH 83 (110)
T ss_dssp SCCCEEEEEEECC-TTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT
T ss_pred CCCcEEEEEEEEC-CCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3457788888764 47999999998764 3589999999999999998899999999999999999999999999999
Q ss_pred cCceEEEEeeecc
Q psy4897 94 AGKVVELEVGVGY 106 (774)
Q Consensus 94 ag~~V~L~V~R~~ 106 (774)
.++.|.|+|.|+.
T Consensus 84 ~~~~v~l~v~R~~ 96 (110)
T 1um1_A 84 GGKKMRFLVAKSD 96 (110)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEeCC
Confidence 9999999998865
No 86
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.41 E-value=1.4e-12 Score=117.24 Aligned_cols=87 Identities=40% Similarity=0.511 Sum_probs=77.2
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
....++|++.+. +.+|||+|.++.+ ..+++|..|.|+|||+++|.|++||+|++|||++|.++++.+++.+++.+++.
T Consensus 9 ~~~~~~v~l~k~-~~glG~~~~~~~~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 86 (104)
T 3i4w_A 9 PREPRRIVIHRG-STGLGFNIVGGEX-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 86 (104)
T ss_dssp CSSCEEEEEECB-TTBTSEEEEECC--CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCccEEEEEEeC-CCccCEEEECCCC-CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 456778888665 6799999998865 45899999999999999988999999999999999999999999999999999
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
+.|+|.|+.
T Consensus 87 v~l~v~r~~ 95 (104)
T 3i4w_A 87 VTIIAQYKP 95 (104)
T ss_dssp EEEEEEECH
T ss_pred EEEEEEECc
Confidence 999998864
No 87
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=122.41 Aligned_cols=88 Identities=25% Similarity=0.348 Sum_probs=79.3
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCC-CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENK-MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~-~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
..++++|.+.+. ..+|||+|.++.+.. .+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++.++.
T Consensus 23 ~~~~~~v~l~k~-~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~ 101 (124)
T 2daz_A 23 PGELHIIELEKD-KNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPS 101 (124)
T ss_dssp SSEEEEEEEECC-SSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCS
T ss_pred CCceEEEEEEeC-CCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456778888655 689999999987754 689999999999999998899999999999999999999999999999999
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|+.
T Consensus 102 ~v~l~v~R~~ 111 (124)
T 2daz_A 102 KVKLVFIRNE 111 (124)
T ss_dssp EEEEEEEECT
T ss_pred eEEEEEEeCC
Confidence 9999998865
No 88
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=9.9e-13 Score=119.29 Aligned_cols=87 Identities=28% Similarity=0.470 Sum_probs=76.1
Q ss_pred CCcEEEEEEeecCCcccEEEEc---cCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH
Q psy4897 19 RDFYSENYKYTENNGLGISIKG---GKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 92 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~G---G~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk 92 (774)
.++++|.+.+ +..+|||+|.+ |.+. ..+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++
T Consensus 8 ~~~~~v~l~k-~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 86 (107)
T 1wf8_A 8 LELFPVELEK-DEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLR 86 (107)
T ss_dssp EEEEEEEEEC-BTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHH
T ss_pred ceEEEEEEEE-CCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 3566677754 56799999998 4443 358999999999999999889999999999999999999999999999
Q ss_pred hcCceEEEEeeecc
Q psy4897 93 RAGKVVELEVGVGY 106 (774)
Q Consensus 93 ~ag~~V~L~V~R~~ 106 (774)
.+++.|.|+|.|..
T Consensus 87 ~~~~~v~l~v~R~~ 100 (107)
T 1wf8_A 87 NTKGNVRFVIGREK 100 (107)
T ss_dssp HCCSEEEEEEEEEC
T ss_pred cCCCeEEEEEEeCC
Confidence 99999999998865
No 89
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.41 E-value=2.8e-13 Score=127.20 Aligned_cols=85 Identities=29% Similarity=0.459 Sum_probs=74.6
Q ss_pred EEEEEEeecCCcccEEEEccCCC----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc---
Q psy4897 22 YSENYKYTENNGLGISIKGGKEN----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--- 94 (774)
Q Consensus 22 ~~V~l~rk~~~gLGfsI~GG~e~----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a--- 94 (774)
++|.+.+++..+|||+|.++.+. ..+++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+.+
T Consensus 27 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 106 (127)
T 1wg6_A 27 LEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSM 106 (127)
T ss_dssp EEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcc
Confidence 33444457889999999988653 25899999999999999988999999999999999999999999999976
Q ss_pred ----CceEEEEeeecc
Q psy4897 95 ----GKVVELEVGVGY 106 (774)
Q Consensus 95 ----g~~V~L~V~R~~ 106 (774)
+..|+|+|.|..
T Consensus 107 ~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 107 EGNIRGMIQLVILRRS 122 (127)
T ss_dssp HHHHTCEEEEEEEECS
T ss_pred ccCCCCEEEEEEEeCC
Confidence 789999998865
No 90
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=1.7e-13 Score=125.11 Aligned_cols=87 Identities=33% Similarity=0.432 Sum_probs=79.1
Q ss_pred CcEEEEEEeecCCcccEEEEccCC---------CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHH
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKE---------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 90 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e---------~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~l 90 (774)
.+++|.+.+..+.+|||+|.+|.+ ...+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+
T Consensus 9 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 9 GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp SSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred ccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 467789988888999999999874 24689999999999999998899999999999999999999999999
Q ss_pred HHhcCceEEEEeeecc
Q psy4897 91 LKRAGKVVELEVGVGY 106 (774)
Q Consensus 91 Lk~ag~~V~L~V~R~~ 106 (774)
++.+++.|.|+|.|..
T Consensus 89 l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 89 LRSVGDTLTVLVCDGF 104 (111)
T ss_dssp HSSCSSEEEECCCCCC
T ss_pred HHcCCCeEEEEEEECC
Confidence 9999999999998764
No 91
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=1e-12 Score=118.38 Aligned_cols=89 Identities=25% Similarity=0.468 Sum_probs=78.9
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCC--CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKEN--KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~--~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
.....++|++.+.. .+|||+|.++.+. ..+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++.+
T Consensus 8 ~~~~~~~v~l~~~~-~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 86 (104)
T 2djt_A 8 QASGHFSVELVRGY-AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG 86 (104)
T ss_dssp SCCCCEEEEEECCS-SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT
T ss_pred CCCceEEEEEEeCC-CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34577888887655 7999999998764 46899999999999999977999999999999999999999999999998
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|.|+|.|+.
T Consensus 87 g~~v~l~v~R~g 98 (104)
T 2djt_A 87 GPQLHLVIRRPL 98 (104)
T ss_dssp CSEEEEEECCCC
T ss_pred CCeEEEEEEECC
Confidence 999999998865
No 92
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.41 E-value=7.8e-13 Score=123.99 Aligned_cols=91 Identities=25% Similarity=0.362 Sum_probs=81.6
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCC-----CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHH
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 90 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~-----~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~l 90 (774)
....+.++|.+.+++..+|||+|.++.+. ..+++|..|.++|||+++|.|++||+|++|||++|.++++.+++.+
T Consensus 11 ~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 90 (129)
T 2dmz_A 11 SSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEV 90 (129)
T ss_dssp SCCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHH
T ss_pred CCCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 44567778888888899999999987653 4589999999999999998899999999999999999999999999
Q ss_pred HHhcCceEEEEeeecc
Q psy4897 91 LKRAGKVVELEVGVGY 106 (774)
Q Consensus 91 Lk~ag~~V~L~V~R~~ 106 (774)
++.+++.|.|+|.|+.
T Consensus 91 l~~~~~~v~l~v~R~~ 106 (129)
T 2dmz_A 91 LRNAGQVVHLTLVRRK 106 (129)
T ss_dssp HHHCCSSEEEEEEEES
T ss_pred HHcCCCeEEEEEEeCC
Confidence 9999999999998875
No 93
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.41 E-value=1.4e-12 Score=113.62 Aligned_cols=77 Identities=22% Similarity=0.378 Sum_probs=71.2
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
.+|++++.|...++|||+++++ +|.+|.+++||+++| |++||+|++|||+++.+++|++++++|++++..|+
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g-------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~ 75 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG-------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVT 75 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT-------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred ceEEEEEEECCCCCeEEEEECC-------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEE
Confidence 4789999998778899999875 489999999999998 99999999999999999999999999999999999
Q ss_pred EEEEE
Q psy4897 254 LEVKY 258 (774)
Q Consensus 254 L~V~R 258 (774)
|+|.+
T Consensus 76 L~v~p 80 (82)
T 1r6j_A 76 ITIMP 80 (82)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99864
No 94
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.40 E-value=1e-12 Score=121.77 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=73.2
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCC-CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc---
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENK-MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--- 94 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~-~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a--- 94 (774)
.++..+.+.+. ++|||+|.||.+.. .+++|.+|.+||||+++|+|++||+|++|||+++.+++|.+++.+++..
T Consensus 17 ~~~~~~~~~~~--~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 94 (118)
T 1v6b_A 17 KDVRLLRIKKE--GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQ 94 (118)
T ss_dssp CCEEEEEEESC--SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCC--CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhc
Confidence 34555555443 59999999998765 4599999999999999966999999999999999999999999999875
Q ss_pred -CceEEEEeeecc
Q psy4897 95 -GKVVELEVGVGY 106 (774)
Q Consensus 95 -g~~V~L~V~R~~ 106 (774)
++.|+|+|.|..
T Consensus 95 ~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 95 GGDWIDLVVAVCP 107 (118)
T ss_dssp TCSEEEEEEECCC
T ss_pred CCCeEEEEEEeCC
Confidence 789999998854
No 95
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=2.4e-12 Score=117.17 Aligned_cols=87 Identities=37% Similarity=0.497 Sum_probs=76.3
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCC------CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKE------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 91 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e------~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lL 91 (774)
..+.+++.+.+. ..+|||+|.+|.+ ...+++|..|.++|||+++| |++||+|++|||++|.++++.+++..+
T Consensus 13 ~~~~~~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~ 90 (110)
T 1x5q_A 13 EEEELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEAL 90 (110)
T ss_dssp CCEEEEEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcceEEEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHh
Confidence 334556666554 8999999999875 34789999999999999998 999999999999999999999999999
Q ss_pred HhcCceEEEEeeecc
Q psy4897 92 KRAGKVVELEVGVGY 106 (774)
Q Consensus 92 k~ag~~V~L~V~R~~ 106 (774)
+.+++.|.|+|.|+.
T Consensus 91 ~~~g~~v~l~v~R~g 105 (110)
T 1x5q_A 91 RGAGTAVQMRVWRES 105 (110)
T ss_dssp HSCCSEEEEEEEECS
T ss_pred hCCCCeEEEEEEECC
Confidence 989999999999875
No 96
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.40 E-value=1.7e-12 Score=116.67 Aligned_cols=90 Identities=18% Similarity=0.261 Sum_probs=77.6
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCC--CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKE--NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e--~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
.+..++++|.+.+..+.+|||+|.+... ...+++|.+|.+++||+++|+|++||+|++|||++|.+.++.+++.+|+.
T Consensus 5 ~~~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 84 (101)
T 2yt7_A 5 SSGDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRE 84 (101)
T ss_dssp STTCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred CCCCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3456789999988888999999985221 12369999999999999977799999999999999999999999999998
Q ss_pred --cCceEEEEeeec
Q psy4897 94 --AGKVVELEVGVG 105 (774)
Q Consensus 94 --ag~~V~L~V~R~ 105 (774)
.++.|+|+|.|.
T Consensus 85 ~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 85 TKSQTSVTLSIVHC 98 (101)
T ss_dssp TTTSSEEEEEECCC
T ss_pred CCCCCeEEEEEEeC
Confidence 788999999875
No 97
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.40 E-value=1.4e-12 Score=117.03 Aligned_cols=82 Identities=23% Similarity=0.378 Sum_probs=74.6
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEE
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVEL 100 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L 100 (774)
++.|.+.|+.+++|||+|....+ .+++|.+|.|+|||+++|.|++||+|++|||++|.++++.+++.+++..+..|+|
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~~--~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L 90 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNEK--QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISL 90 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECTT--CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEE
T ss_pred cEEEEEEeCCCCCeeEEEEeCCC--CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 56789999999999999986432 5899999999999999988999999999999999999999999999998889999
Q ss_pred Eeee
Q psy4897 101 EVGV 104 (774)
Q Consensus 101 ~V~R 104 (774)
+|.+
T Consensus 91 ~V~~ 94 (97)
T 2ejy_A 91 KVIP 94 (97)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8865
No 98
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.40 E-value=3.4e-13 Score=119.48 Aligned_cols=86 Identities=21% Similarity=0.379 Sum_probs=78.5
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
...++.+.++++.+|||+|.+|.+...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 4 g~~~~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 82 (94)
T 1vb7_A 4 GSSGLTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLR 82 (94)
T ss_dssp CCCCEEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEE
T ss_pred ccEEEEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 34567788889999999999998877799999999999999998 99999999999999999999999999998888999
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|+.
T Consensus 83 l~v~R~g 89 (94)
T 1vb7_A 83 LQLDRSS 89 (94)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 9998875
No 99
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.40 E-value=1.2e-12 Score=123.13 Aligned_cols=87 Identities=28% Similarity=0.437 Sum_probs=77.7
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc--Cc
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GK 96 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a--g~ 96 (774)
...++|++.+ +..+|||+|.+|.+...+++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+++.+ ++
T Consensus 17 g~~~~v~l~~-~~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~ 95 (129)
T 2kpk_A 17 GKFIHTKLRK-SSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGA 95 (129)
T ss_dssp SEEEEEEEEE-CSSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTE
T ss_pred CcEEEEEEEE-CCCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 4556777765 66799999999877667899999999999999988999999999999999999999999999987 78
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|..
T Consensus 96 ~v~l~v~R~~ 105 (129)
T 2kpk_A 96 SVDLELCRGY 105 (129)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEEEeCC
Confidence 8999998864
No 100
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=1.5e-12 Score=119.59 Aligned_cols=88 Identities=33% Similarity=0.443 Sum_probs=78.7
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCC-------CCeEEEEecCCCHHhh-hCCCCCCCEEEEECCEecCCCCHHHHHH
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENK-------MPILISKIFKGMAADQ-TEQLYVGDAILSVNGEDLREATHDEAVK 89 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~-------~gi~Vs~V~pGSpAar-aG~LqvGD~ILsVNG~~V~~~sh~eaV~ 89 (774)
....++|.+.++++.+|||+|.++.+.. .+++|..|.++|||++ +| |++||+|++|||++|.++++.+++.
T Consensus 8 ~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~ 86 (114)
T 1uew_A 8 SLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVK 86 (114)
T ss_dssp CCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHH
T ss_pred cccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 4567889999999999999999875432 2679999999999999 76 9999999999999999999999999
Q ss_pred HHHhcCceEEEEeeecc
Q psy4897 90 ALKRAGKVVELEVGVGY 106 (774)
Q Consensus 90 lLk~ag~~V~L~V~R~~ 106 (774)
+++..++.|.|+|.|..
T Consensus 87 ~l~~~g~~v~l~v~r~~ 103 (114)
T 1uew_A 87 LIKDAGLSVTLRIIPQE 103 (114)
T ss_dssp HHHHTTTEEEEEECCCS
T ss_pred HHHcCCCeEEEEEEeCC
Confidence 99999999999998865
No 101
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.39 E-value=7e-13 Score=124.50 Aligned_cols=92 Identities=21% Similarity=0.227 Sum_probs=81.1
Q ss_pred ccCCCCcEEEEEEeec-CCcccEEEEccCCC---------CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCH
Q psy4897 15 FFSSRDFYSENYKYTE-NNGLGISIKGGKEN---------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATH 84 (774)
Q Consensus 15 ~~~s~~~~~V~l~rk~-~~gLGfsI~GG~e~---------~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh 84 (774)
......++.|.+.+.+ +++|||+|.++.+. ..|++|..|.++|||+++|.|++||+|++|||++|.++++
T Consensus 24 ~~~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 103 (128)
T 1nf3_C 24 DILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSL 103 (128)
T ss_dssp TTSCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCH
T ss_pred ccCCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 3456778889998876 68999999988642 2479999999999999998799999999999999999999
Q ss_pred HHHHHHHHhcCceEEEEeeecc
Q psy4897 85 DEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 85 ~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
.+++.+++.++..|.|+|.|..
T Consensus 104 ~~~~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 104 DQVTDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHHHHTTTSEEEEEECCC
T ss_pred HHHHHHHHcCCCeEEEEEEECC
Confidence 9999999999999999998865
No 102
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.39 E-value=2.8e-13 Score=142.44 Aligned_cols=87 Identities=68% Similarity=0.918 Sum_probs=81.3
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
.+++|+|.|.++++|||+|.||.+...+++|.+|.+||||+++++|++||+|++|||++|.+++|.+++.+++.+++.|+
T Consensus 77 ~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~ 156 (263)
T 1z87_A 77 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVV 156 (263)
T ss_dssp SSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCC
T ss_pred ccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEE
Confidence 57899998888899999999999888899999999999999954599999999999999999999999999999999999
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|..
T Consensus 157 L~V~R~~ 163 (263)
T 1z87_A 157 LEVKYMK 163 (263)
T ss_dssp EEEECCS
T ss_pred EEEEeCc
Confidence 9998864
No 103
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.39 E-value=3.5e-14 Score=160.25 Aligned_cols=154 Identities=18% Similarity=0.255 Sum_probs=50.6
Q ss_pred CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH--hcCceEEEEeeecccccceeeeeeccceeee
Q psy4897 46 MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK--RAGKVVELEVGVGYGRCGTLETYVRGQWYKV 123 (774)
Q Consensus 46 ~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk--~ag~~V~L~V~R~~~ks~~~~~~~~~~~~~~ 123 (774)
.|++|.+|.++|||+++| |++||+|++|||++|.++. +...++. +.++.|.|+|.|++.. ..+.
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~-~~~~---------- 351 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSFA--ALRAQVGTMPVGSKLTLGLLRDGKQ-VNVN---------- 351 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSSH--HHHHHTTSSBTTCCCEEEEESSSCE-EECC----------
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEEEECCEE-EEEE----------
Confidence 589999999999999997 9999999999999999884 4444554 4688999999886521 0000
Q ss_pred eeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCccccceEEEEEeccCCCCcceEEeCCCCCCCCeE
Q psy4897 124 FVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRIIRVKKSENNGLGISIKGGKENKMPIL 203 (774)
Q Consensus 124 ~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~ 203 (774)
.++ ...... . .... .....-+|+.+..- ....+++
T Consensus 352 -v~~---------~~~~~~----------~-----------------~~~~-------~~~~~~~G~~l~~~-~~~~gv~ 386 (448)
T 1ky9_A 352 -LEL---------QQSSQN----------Q-----------------VDSS-------SIFNGIEGAEMSNK-GKDQGVV 386 (448)
T ss_dssp -CC-----------------------------------------------------------------------------
T ss_pred -EEE---------ecCCCc----------c-----------------cccc-------cccccccceEeecc-CCCCeEE
Confidence 000 000000 0 0000 00011235544321 1235789
Q ss_pred EEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEecc
Q psy4897 204 ISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 204 Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
|..|.+++||+++| |++||+|++|||+++.+ ++++.++|+..++.+.|+|.|.+.
T Consensus 387 V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~~~~v~l~v~R~g~ 441 (448)
T 1ky9_A 387 VNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSKPSVLALNIQRGDS 441 (448)
T ss_dssp ----------------------------------------------------------
T ss_pred EEEecCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCeEEEEEEECCE
Confidence 99999999999998 99999999999999986 789999998866688899988654
No 104
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=1.5e-12 Score=118.28 Aligned_cols=89 Identities=33% Similarity=0.524 Sum_probs=79.3
Q ss_pred CCCCcEEEEEEeecCCcccEEEE-----ccCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHH
Q psy4897 17 SSRDFYSENYKYTENNGLGISIK-----GGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAV 88 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~-----GG~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV 88 (774)
...+.++|++.+ .+.+|||+|. ||.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++
T Consensus 6 ~~~~~~~v~l~k-~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 84 (108)
T 1q7x_A 6 KPGDIFEVELAK-NDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAV 84 (108)
T ss_dssp CSSSEEEEEEES-SSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHH
T ss_pred CCCcEEEEEEEE-CCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 345788888865 4689999999 88764 36899999999999999988999999999999999999999999
Q ss_pred HHHHhcCceEEEEeeecc
Q psy4897 89 KALKRAGKVVELEVGVGY 106 (774)
Q Consensus 89 ~lLk~ag~~V~L~V~R~~ 106 (774)
.+++.+++.|.|+|.|+.
T Consensus 85 ~~~~~~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 85 ETLRNTGQVVHLLLEKGQ 102 (108)
T ss_dssp HHHHHTTSEEEEEEECCC
T ss_pred HHHHcCCCeEEEEEEeCC
Confidence 999999999999998865
No 105
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.6e-12 Score=116.41 Aligned_cols=87 Identities=32% Similarity=0.412 Sum_probs=78.5
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
...+++|++.+.+.+.|||++.++.+...+++|..|.++|||+++| |++||+|++|||++|.++++.+++..++. ++.
T Consensus 8 ~~~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~ 85 (100)
T 2eeh_A 8 SDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SSR 85 (100)
T ss_dssp CCEECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CSS
T ss_pred CCeEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CCE
Confidence 4567788998888889999999887666799999999999999998 99999999999999999999999888887 789
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
|.|+|.|+.
T Consensus 86 v~l~v~R~g 94 (100)
T 2eeh_A 86 LHMMVRRMG 94 (100)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEECC
Confidence 999999875
No 106
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.38 E-value=3.9e-12 Score=111.67 Aligned_cols=83 Identities=28% Similarity=0.348 Sum_probs=71.0
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
..++|++.+.+ .+|||+|.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.++..+.
T Consensus 3 ~~r~v~l~r~~-~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 79 (91)
T 1g9o_A 3 LPRLCCLEKGP-NGYGFHLHGEKG-KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVR 79 (91)
T ss_dssp CCEEEEEECBT-TBCCEEEEECTT-CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ccEEEEEEeCC-CcccEEEEecCC-CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 35677876654 699999998764 3689999999999999998 99999999999999999999999999998877766
Q ss_pred EEeeec
Q psy4897 100 LEVGVG 105 (774)
Q Consensus 100 L~V~R~ 105 (774)
+.+.++
T Consensus 80 ~~~~~r 85 (91)
T 1g9o_A 80 LLVVDP 85 (91)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 666554
No 107
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.37 E-value=3.6e-12 Score=117.40 Aligned_cols=91 Identities=24% Similarity=0.323 Sum_probs=78.5
Q ss_pred cccCCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 14 FFFSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 14 ~~~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
...+.....+|++.+...++|||+|.++.+...+++|..|.++|||+++|.|++||+|++|||+++.+.++.+++.+++.
T Consensus 18 ~~~q~~~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 97 (114)
T 2gzv_A 18 LYFQSMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQE 97 (114)
T ss_dssp ----CCCCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eeeccCCCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34667788999999998889999999987766789999999999999998899999999999999999999999999998
Q ss_pred cCceEEEEeee
Q psy4897 94 AGKVVELEVGV 104 (774)
Q Consensus 94 ag~~V~L~V~R 104 (774)
.+..|.|+|.+
T Consensus 98 ~~~~v~l~v~~ 108 (114)
T 2gzv_A 98 VKGEVTIHYNK 108 (114)
T ss_dssp CCSEEEEEEEC
T ss_pred CCCeEEEEEEe
Confidence 88888888854
No 108
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.37 E-value=3.9e-12 Score=115.16 Aligned_cols=86 Identities=27% Similarity=0.319 Sum_probs=74.1
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCC------------CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHH
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENK------------MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDE 86 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~------------~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~e 86 (774)
...+.|.+.+... +|||+|.++.+.. .+++|..|.++|||+++| |++||+|++|||+++.++++.+
T Consensus 5 ~~~r~v~l~k~~~-g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 82 (107)
T 3qe1_A 5 GSPRVVRIVKSES-GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQ 82 (107)
T ss_dssp -CCEEEEEECBTT-BTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred CCcEEEEEEECCC-CCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 4567888866554 8999999885432 235799999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCceEEEEeeecc
Q psy4897 87 AVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 87 aV~lLk~ag~~V~L~V~R~~ 106 (774)
++.+++.+++.+.|+|.|..
T Consensus 83 ~~~~l~~~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 83 VVDLIRAGEKELILTVLSVE 102 (107)
T ss_dssp HHHHHHHCSSEEEEEEECSS
T ss_pred HHHHHHcCCCEEEEEEEcCC
Confidence 99999999999999998864
No 109
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=2.7e-12 Score=115.25 Aligned_cols=89 Identities=33% Similarity=0.445 Sum_probs=76.3
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCC---------CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHH
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKEN---------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAV 88 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~---------~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV 88 (774)
+-+.++|.+.+.+...|||++.++.+. ..+++|..|.++|||+++|.|++||+|++|||++|.++++.+++
T Consensus 2 ~ldp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~ 81 (103)
T 2fcf_A 2 SMQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV 81 (103)
T ss_dssp CCSCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 346789999888889999999986542 25899999999999999977999999999999999999999999
Q ss_pred HHHHhcCceEEEEeeecc
Q psy4897 89 KALKRAGKVVELEVGVGY 106 (774)
Q Consensus 89 ~lLk~ag~~V~L~V~R~~ 106 (774)
.+++..+..+.|+|.|..
T Consensus 82 ~~l~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 82 EAIRKAGNPVVFMVQSII 99 (103)
T ss_dssp HHHHTCCSSEEEEEECCC
T ss_pred HHHHhCCCcEEEEEEECC
Confidence 999998889999998754
No 110
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.36 E-value=1.1e-12 Score=120.15 Aligned_cols=86 Identities=27% Similarity=0.466 Sum_probs=75.7
Q ss_pred CcEEEEEEeecCCcccEEEEc---cCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 20 DFYSENYKYTENNGLGISIKG---GKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~G---G~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
++++|.+.+ +..+|||+|.+ |.+. ..|++|..|.|+|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 4 ~~~~v~l~k-~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (113)
T 2g5m_B 4 ELFPVELEK-DSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 82 (113)
T ss_dssp EEEEEECCC-CSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEEe-CCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 456677754 56899999998 5442 3689999999999999998899999999999999999999999999999
Q ss_pred cCceEEEEeeecc
Q psy4897 94 AGKVVELEVGVGY 106 (774)
Q Consensus 94 ag~~V~L~V~R~~ 106 (774)
+++.|.|+|.|+.
T Consensus 83 ~g~~v~l~v~R~~ 95 (113)
T 2g5m_B 83 TKGRVRFMIGRER 95 (113)
T ss_dssp SCSSCEEEEEECC
T ss_pred CCCeEEEEEEeCC
Confidence 9999999999875
No 111
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.36 E-value=4e-12 Score=116.67 Aligned_cols=85 Identities=21% Similarity=0.308 Sum_probs=77.6
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCC-CCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQL-YVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~L-qvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
..+++.|.+.+....+|||.|.++ ..+++|..|.+++||+++| | ++||+|++|||++|.++++.+++.+++..+.
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~~~---~~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 98 (113)
T 1va8_A 23 GETVKIVRIEKARDIPLGATVRNE---MDSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHG 98 (113)
T ss_dssp TEECEEEEEEECTTCCCCEEEEEC---SSSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTCCHHHHHHHHHHCCE
T ss_pred CCceEEEEEEeCCCCceeEEEEeC---CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 457888999998888999999876 4689999999999999998 6 9999999999999999999999999999888
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|..
T Consensus 99 ~v~l~v~r~~ 108 (113)
T 1va8_A 99 TLTFVLIPSS 108 (113)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEECC
Confidence 9999998765
No 112
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=1.2e-12 Score=115.73 Aligned_cols=84 Identities=24% Similarity=0.290 Sum_probs=75.4
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
...++.|.+.|+++.+|||+|.+. ..+++|.+|.++|||+++|+|++||+|++|||++| +.++.+++.+++..++.
T Consensus 4 ~~~~r~v~l~k~~~~~lG~~i~~~---~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~ 79 (91)
T 2e7k_A 4 GSSGRMVGIRKTAGEHLGVTFRVE---GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGS 79 (91)
T ss_dssp CCCSCBCCBCCCTTCCCCEEEEES---SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSS
T ss_pred CCCcEEEEEEECCCCcEeEEEEec---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCe
Confidence 345677888888999999999872 46899999999999999988999999999999999 89999999999998889
Q ss_pred EEEEeeec
Q psy4897 98 VELEVGVG 105 (774)
Q Consensus 98 V~L~V~R~ 105 (774)
|.|+|.|.
T Consensus 80 v~l~v~~~ 87 (91)
T 2e7k_A 80 VILKILSG 87 (91)
T ss_dssp BCEEEECC
T ss_pred EEEEEEEC
Confidence 99999764
No 113
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.36 E-value=1.9e-12 Score=116.58 Aligned_cols=83 Identities=27% Similarity=0.315 Sum_probs=72.3
Q ss_pred CcEEEEEEeecCCcccEEEEccCC--------CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKE--------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 91 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e--------~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lL 91 (774)
..++|++.+ +.+|||+|.||.+ ...+++|..|.++|||++ | |++||+|++|||+++.++++.+++.++
T Consensus 11 ~~~~v~l~~--~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~ 86 (103)
T 1n7t_A 11 QEIRVRVEK--DPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLL 86 (103)
T ss_dssp CCEEEEEEC--SSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred EEEEEEEcc--CCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 345566655 4499999999875 346899999999999999 6 999999999999999999999999999
Q ss_pred HhcCceEEEEeeecc
Q psy4897 92 KRAGKVVELEVGVGY 106 (774)
Q Consensus 92 k~ag~~V~L~V~R~~ 106 (774)
+.+++.+.|+|.|+.
T Consensus 87 ~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 87 KTFQNTVELIIVREV 101 (103)
T ss_dssp HHCCSEEEEEEECCC
T ss_pred hcCCCeEEEEEEecC
Confidence 999999999998753
No 114
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.36 E-value=2.8e-12 Score=112.43 Aligned_cols=86 Identities=76% Similarity=1.112 Sum_probs=78.2
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
.++++.+.+....+|||.+.++.+...+++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~ 83 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVV 83 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred ccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 47889999987889999999876666789999999999999994499999999999999999999999999999889999
Q ss_pred EEEEEe
Q psy4897 254 LEVKYL 259 (774)
Q Consensus 254 L~V~R~ 259 (774)
|+|.|.
T Consensus 84 l~v~r~ 89 (90)
T 1qav_A 84 LEVKYM 89 (90)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999875
No 115
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.36 E-value=3e-12 Score=117.51 Aligned_cols=90 Identities=24% Similarity=0.296 Sum_probs=81.3
Q ss_pred ccCCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 15 FFSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 15 ~~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
...+-+.+++.+.++...+|||+|.++.+ ..|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+++..
T Consensus 8 ~~~~ldp~~~~l~~~~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 85 (114)
T 2edz_A 8 MASTFNPRECKLSKQEGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS 85 (114)
T ss_dssp CCCCCCCEEEEEECCTTCCCSCEEECCTT-CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHT
T ss_pred HhhcCCCEEEEEeCCCCCcccEEEEEecC-CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34555899999999999999999987543 3689999999999999998 999999999999999999999999999999
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|.|+|.|+.
T Consensus 86 g~~v~l~v~R~~ 97 (114)
T 2edz_A 86 GNSVTLLVLDGD 97 (114)
T ss_dssp CSEEEEEEECHH
T ss_pred CCEEEEEEEECC
Confidence 999999998865
No 116
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=4.9e-12 Score=111.31 Aligned_cols=82 Identities=16% Similarity=0.173 Sum_probs=72.3
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
..+++|++.+ +..+|||.+.+. .+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..+..+
T Consensus 2 ~~~r~v~l~~-~~~g~G~~l~~~----~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 75 (91)
T 2f5y_A 2 MRYRQITIPR-GKDGFGFTICCD----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEI 75 (91)
T ss_dssp CEEEEEEEEC-BTTBTSEEEECS----SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred CceEEEEEEe-CCCCccEEEecC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3467788865 557899999864 469999999999999998 9999999999999999999999999999988899
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|..
T Consensus 76 ~l~v~R~~ 83 (91)
T 2f5y_A 76 ILLVWRMV 83 (91)
T ss_dssp EEEEEECC
T ss_pred EEEEEeCC
Confidence 99998865
No 117
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.35 E-value=3.4e-12 Score=115.32 Aligned_cols=84 Identities=25% Similarity=0.321 Sum_probs=76.7
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEE
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVEL 100 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L 100 (774)
++.|.+.+.++.+|||.+.++.+ ..+++|..|.+||||+++| |++||+|++|||+++.+++|.+++.+++.+++.|.|
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l 79 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTL 79 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTT-CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeC-CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEE
Confidence 46788989888999999997754 4589999999999999998 999999999999999999999999999999999999
Q ss_pred Eeeecc
Q psy4897 101 EVGVGY 106 (774)
Q Consensus 101 ~V~R~~ 106 (774)
+|.|..
T Consensus 80 ~v~r~~ 85 (106)
T 3ngh_A 80 LVLDGD 85 (106)
T ss_dssp EEECHH
T ss_pred EEEECC
Confidence 998865
No 118
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=9.4e-13 Score=118.20 Aligned_cols=87 Identities=31% Similarity=0.576 Sum_probs=76.9
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
-..+++.+.+ ...+|||+|.++.+...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.+++.|
T Consensus 10 ~~~~~v~l~~-~~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 88 (103)
T 1wfv_A 10 FDYFTVDMEK-GAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRV 88 (103)
T ss_dssp SCCEECCEEC-CTTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEE
T ss_pred ceEEEEEEec-CCCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3556666654 447799999998877779999999999999999779999999999999999999999999999889999
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|+.
T Consensus 89 ~l~v~R~~ 96 (103)
T 1wfv_A 89 RLLLKRGT 96 (103)
T ss_dssp CEEEECTT
T ss_pred EEEEEECC
Confidence 99998865
No 119
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.35 E-value=4.7e-12 Score=111.12 Aligned_cols=79 Identities=19% Similarity=0.243 Sum_probs=69.9
Q ss_pred EEEEEEe-ecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEE
Q psy4897 22 YSENYKY-TENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVEL 100 (774)
Q Consensus 22 ~~V~l~r-k~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L 100 (774)
..|++.+ +.+.+|||.+.+ +++|.+|.+||||+++|+|++||+|++|||+++.++++.+++.+++.++..|+|
T Consensus 2 l~v~l~~~~~~~~~G~~~~~------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L 75 (88)
T 3e17_A 2 IGVLLMKSRANEEYGLRLGS------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQL 75 (88)
T ss_dssp EEEEEECBTTBCCCCEEEEE------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEE
T ss_pred eEEEEEeCCCCCCCCEEEeC------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4566665 455799999975 699999999999999988999999999999999999999999999999999999
Q ss_pred Eeeecc
Q psy4897 101 EVGVGY 106 (774)
Q Consensus 101 ~V~R~~ 106 (774)
+|.+..
T Consensus 76 ~v~~~~ 81 (88)
T 3e17_A 76 VVLRDL 81 (88)
T ss_dssp EECCC-
T ss_pred EEeCCC
Confidence 997643
No 120
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.35 E-value=5.6e-12 Score=114.98 Aligned_cols=86 Identities=26% Similarity=0.427 Sum_probs=75.7
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
...++.|.+.+ .+.+|||+|.++.+ .+++|..|.+++||+++|+|++||+|++|||++|.++++.+++.+++.+++.
T Consensus 13 ~~~~~~v~l~~-~~~~lG~~l~~~~~--~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 89 (111)
T 2dlu_A 13 WGHVEEVELIN-DGSGLGFGIVGGKT--SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNS 89 (111)
T ss_dssp CSEEEEEEEEC-CSSCCCEEEECCSS--SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSE
T ss_pred cCceEEEEEEe-CCCccCEEEeccCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 34567777754 56789999998754 4899999999999999988999999999999999999999999999999999
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
|.|+|.|+.
T Consensus 90 v~l~v~R~~ 98 (111)
T 2dlu_A 90 VRMLVARDP 98 (111)
T ss_dssp EEEEEEESC
T ss_pred EEEEEEeCC
Confidence 999998864
No 121
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.34 E-value=7.2e-12 Score=115.41 Aligned_cols=93 Identities=38% Similarity=0.526 Sum_probs=82.3
Q ss_pred cccceEEEEEeccCCCCcceEEeCCCCC---------CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHH
Q psy4897 171 VENQKRIIRVKKSENNGLGISIKGGKEN---------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEA 241 (774)
Q Consensus 171 ~~~~~r~V~L~k~~~~~LGfsi~gg~~~---------~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~ 241 (774)
....++++.+.+....+|||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.++++.++
T Consensus 12 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 91 (117)
T 2ehr_A 12 HWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEA 91 (117)
T ss_dssp CBCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHH
T ss_pred cCCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 3446789999998778999999987643 3689999999999999998899999999999999999999999
Q ss_pred HHHHHHcCcceEEEEEEecccc
Q psy4897 242 VKALKRAGKLVELEVKYLREVT 263 (774)
Q Consensus 242 v~~Lk~~g~~V~L~V~R~~~~~ 263 (774)
+.+++..++.+.|+|.|.....
T Consensus 92 ~~~~~~~g~~v~l~v~r~~~~~ 113 (117)
T 2ehr_A 92 VEAIKNAGNPVVFIVQSLSSTP 113 (117)
T ss_dssp HHHHHTSCSSEEEEECCBSCCC
T ss_pred HHHHHcCCCeEEEEEEECCCCC
Confidence 9999999999999998876654
No 122
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.34 E-value=7e-12 Score=110.85 Aligned_cols=85 Identities=27% Similarity=0.428 Sum_probs=74.2
Q ss_pred cEEEEEEeecCCcccEEEEccCC----CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 21 FYSENYKYTENNGLGISIKGGKE----NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e----~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
.++|.+ +++..+|||++.++.+ ...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.+++
T Consensus 5 ~~~v~l-~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 83 (97)
T 2iwn_A 5 TFDVEL-TKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 83 (97)
T ss_dssp EEEEEE-ECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCS
T ss_pred EEEEEE-ecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456666 4567889999998754 24689999999999999997799999999999999999999999999999999
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|+.
T Consensus 84 ~v~l~v~r~g 93 (97)
T 2iwn_A 84 TVLLTLMRRG 93 (97)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEeCC
Confidence 9999998865
No 123
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.34 E-value=2.5e-12 Score=128.95 Aligned_cols=87 Identities=32% Similarity=0.498 Sum_probs=81.2
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
...+++|.+.+.++.+|||+|.||.+...+++|..|.+||||+++| |++||+|++|||++|.++++.+++.+++. +..
T Consensus 82 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~ 159 (192)
T 3k1r_A 82 SRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EKT 159 (192)
T ss_dssp CSSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SSE
T ss_pred CCceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CCe
Confidence 4568899999998999999999998877899999999999999998 99999999999999999999999999988 899
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
|.|+|.|.+
T Consensus 160 v~l~v~r~g 168 (192)
T 3k1r_A 160 VSIKVRHIG 168 (192)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 999998865
No 124
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.34 E-value=3.5e-12 Score=117.14 Aligned_cols=90 Identities=34% Similarity=0.523 Sum_probs=78.9
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCCC-CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKENK-MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 94 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~-~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a 94 (774)
....+.+.+.+. +...+|||+|.++.+.. .+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..
T Consensus 13 ~~~~~~~~v~l~-~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 91 (116)
T 2dm8_A 13 IVPGQEMIIEIS-KGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT 91 (116)
T ss_dssp CCTTSCEEEEEE-CCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC
T ss_pred cCCCCEEEEEEE-ECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 344556778875 45689999999887765 6899999999999999988999999999999999999999999999998
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|.|+|.|+.
T Consensus 92 ~~~v~l~v~R~~ 103 (116)
T 2dm8_A 92 PQKVRLVVYRDE 103 (116)
T ss_dssp CSEEEEEEECCS
T ss_pred CCeEEEEEEeCC
Confidence 899999998865
No 125
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.34 E-value=1.6e-12 Score=114.33 Aligned_cols=84 Identities=25% Similarity=0.256 Sum_probs=71.9
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
..++|++.+.++ +|||+|.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..++.+.
T Consensus 3 ~pr~v~l~k~~~-~~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2vsp_A 3 KPKLCRLAKGEN-GYGFHLNAIRG-LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVT 79 (91)
T ss_dssp CEEEEEEECBTT-BTSCCCBCCTT-CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEE
T ss_pred CcEEEEEEeCCC-cccEEEEeccC-CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 567788866555 89999987644 3588999999999999998 99999999999999999999999999998899999
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|..
T Consensus 80 l~v~r~~ 86 (91)
T 2vsp_A 80 LLVCGKK 86 (91)
T ss_dssp EEEEC--
T ss_pred EEEEeCC
Confidence 9998865
No 126
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.34 E-value=5.3e-12 Score=111.57 Aligned_cols=85 Identities=25% Similarity=0.329 Sum_probs=73.2
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
...+.+.+.+ +..+|||++.++.+. .+++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+++.++..+
T Consensus 4 ~~~r~v~l~~-~~~~~G~~l~~~~~~-~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 80 (95)
T 3r68_A 4 HQPRVVVIKK-GSNGYGFYLRAGPEQ-KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 80 (95)
T ss_dssp CCCEEEEEEC-BTTBCSCEEEEC--C-CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCcEEEEEec-CCCcccEEEEecCCC-CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 3456677755 678999999976543 589999999999999998 9999999999999999999999999999998988
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.+.+.|..
T Consensus 81 ~~~~~r~~ 88 (95)
T 3r68_A 81 TLLVLDKE 88 (95)
T ss_dssp EEEEEECC
T ss_pred EEEEECCc
Confidence 88887754
No 127
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.34 E-value=4.2e-12 Score=114.58 Aligned_cols=91 Identities=46% Similarity=0.673 Sum_probs=78.5
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..+.+.+.+....+|||++.++.+...+++|..|.+++||+++++|++||+|++|||+++.++++++++.+++..++.++
T Consensus 9 ~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~ 88 (103)
T 2dc2_A 9 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 88 (103)
T ss_dssp CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEE
T ss_pred CcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 46788888887889999999876666789999999999999963499999999999999999999999999999888999
Q ss_pred EEEEEeccccc
Q psy4897 254 LEVKYLREVTP 264 (774)
Q Consensus 254 L~V~R~~~~~~ 264 (774)
|+|.+......
T Consensus 89 l~v~~~~~~~~ 99 (103)
T 2dc2_A 89 FEVVYVALEHH 99 (103)
T ss_dssp EEEEECC----
T ss_pred EEEEecCCcch
Confidence 99988665443
No 128
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.32 E-value=5.6e-12 Score=109.72 Aligned_cols=85 Identities=49% Similarity=0.739 Sum_probs=76.0
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
+++.+++.+....+|||.+.++.+...+++|..|.++|||+++++|++||+|++|||+++.++++++++.+++.+++.+.
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 81 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 81 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 36788999887789999999876666789999999999999942399999999999999999999999999999888999
Q ss_pred EEEEE
Q psy4897 254 LEVKY 258 (774)
Q Consensus 254 L~V~R 258 (774)
|+|++
T Consensus 82 l~v~~ 86 (87)
T 4e34_A 82 FEVVY 86 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
No 129
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=99.00 E-value=1.3e-13 Score=126.93 Aligned_cols=96 Identities=43% Similarity=0.593 Sum_probs=82.0
Q ss_pred cccCCCccccccCCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhh-hCCCCCCCEEEEECCEecCCCC
Q psy4897 5 LVLGGPTEAFFFSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQ-TEQLYVGDAILSVNGEDLREAT 83 (774)
Q Consensus 5 l~~~~~~~~~~~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAar-aG~LqvGD~ILsVNG~~V~~~s 83 (774)
...++.+|.. ....+++|.+.++.+.+|||+|.+|.+...+++|..|.++|||++ +| |++||+|++|||++|.+.+
T Consensus 14 ~~~~~~me~~--~~~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~ 90 (112)
T 2lob_A 14 HIEGRHMENL--YFQGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTK 90 (112)
Confidence 3344444443 345677899999999999999999988778999999999999999 65 9999999999999999999
Q ss_pred HHHHHHHHHhcCceEEEEee
Q psy4897 84 HDEAVKALKRAGKVVELEVG 103 (774)
Q Consensus 84 h~eaV~lLk~ag~~V~L~V~ 103 (774)
+.+++.+++.++..|+|+|.
T Consensus 91 ~~~~~~~l~~~~~~v~l~V~ 110 (112)
T 2lob_A 91 HKEAVTILSQQRGEIEFEVV 110 (112)
Confidence 99999999988888888774
No 130
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.32 E-value=7.2e-12 Score=116.24 Aligned_cols=88 Identities=26% Similarity=0.525 Sum_probs=79.0
Q ss_pred ceEEEEEeccCCCCcceEEeCCCC---CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKE---NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~---~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
..+.+.+.+....+|||++.++.+ ...|++|..|.+++||+++|+|++||+|++|||+++.++++++++.+|+..++
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 103 (118)
T 3b76_A 24 HEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSS 103 (118)
T ss_dssp EEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCS
T ss_pred CcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 467888888777899999998763 35689999999999999998899999999999999999999999999999999
Q ss_pred ceEEEEEEecc
Q psy4897 251 LVELEVKYLRE 261 (774)
Q Consensus 251 ~V~L~V~R~~~ 261 (774)
.|+|+|.|...
T Consensus 104 ~v~L~v~R~~~ 114 (118)
T 3b76_A 104 SIVLKALEVKE 114 (118)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEECCC
Confidence 99999988653
No 131
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.32 E-value=6.9e-12 Score=117.12 Aligned_cols=90 Identities=32% Similarity=0.441 Sum_probs=77.6
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCC---------CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHH
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKEN---------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEA 87 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~---------~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~ea 87 (774)
.-.+.++|.+.+...++|||++.++.+. ..|++|..|.++|||+++|.|++||+|++|||++|.++++.++
T Consensus 21 ~~~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~ 100 (123)
T 2iwq_A 21 QSMQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQA 100 (123)
T ss_dssp --CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred ccCCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 3455688899888889999999976542 3589999999999999998899999999999999999999999
Q ss_pred HHHHHhcCceEEEEeeecc
Q psy4897 88 VKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 88 V~lLk~ag~~V~L~V~R~~ 106 (774)
+.+++..+..|.|+|.|..
T Consensus 101 ~~~l~~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 101 VEAIRKAGNPVVFMVQSII 119 (123)
T ss_dssp HHHHHHCCSSEEEEEECCC
T ss_pred HHHHHcCCCeEEEEEEECC
Confidence 9999998889999998754
No 132
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.31 E-value=1.1e-11 Score=114.31 Aligned_cols=87 Identities=40% Similarity=0.520 Sum_probs=77.4
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
..++++|.+.+. ..+|||+|.++.+ ..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.+++.
T Consensus 12 ~~~~~~v~l~k~-~~glG~~l~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 89 (119)
T 1tp5_A 12 PREPRRIVIHRG-STGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 89 (119)
T ss_dssp CCSCEEEEEECT-TSCCCEEEEECGG-GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCccEEEEEEEC-CCCccEEEecCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 457888888764 4679999998754 36899999999999999977999999999999999999999999999999999
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
+.|+|.|+.
T Consensus 90 v~l~v~r~~ 98 (119)
T 1tp5_A 90 VTIIAQYKP 98 (119)
T ss_dssp EEEEEEECH
T ss_pred EEEEEEECC
Confidence 999998864
No 133
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.31 E-value=7.3e-12 Score=112.45 Aligned_cols=87 Identities=25% Similarity=0.325 Sum_probs=75.8
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
+....++|++.+ +..+|||+|.++.+ ..+++|..|.++|||+++| |++||+|++|||++|.++++.+++.+++.+++
T Consensus 3 ~~~~~r~v~l~k-~~~g~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (102)
T 2d90_A 3 SGSSGRVVVIKK-GSNGYGFYLRAGPE-QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGD 79 (102)
T ss_dssp SCSSSEEEEEEC-CSSSSSCEEEECSS-SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTT
T ss_pred CCCCCEEEEEee-CCCCccEEEEeecC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 345667888865 55699999998543 4689999999999999998 99999999999999999999999999999899
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|+.
T Consensus 80 ~v~l~v~r~~ 89 (102)
T 2d90_A 80 QTTLLVLDKE 89 (102)
T ss_dssp EEEEEECSTT
T ss_pred EEEEEEEECC
Confidence 9999998765
No 134
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.31 E-value=5.2e-12 Score=112.70 Aligned_cols=81 Identities=20% Similarity=0.263 Sum_probs=70.2
Q ss_pred EEEEeecCCcccEEEEccCCCC-------CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 24 ENYKYTENNGLGISIKGGKENK-------MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 24 V~l~rk~~~gLGfsI~GG~e~~-------~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
|++ ++++.+|||+|.++.... .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.+++
T Consensus 6 v~l-~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 83 (99)
T 3khf_A 6 IVI-HSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGN 83 (99)
T ss_dssp EEE-EC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred EEE-EeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 444 567899999999764321 267999999999999998 99999999999999999999999999999999
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.+.|+|.|..
T Consensus 84 ~v~l~v~r~~ 93 (99)
T 3khf_A 84 KISLRTTALE 93 (99)
T ss_dssp EEEEEEECSC
T ss_pred EEEEEEEECC
Confidence 9999998865
No 135
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.31 E-value=2.2e-11 Score=109.87 Aligned_cols=87 Identities=32% Similarity=0.572 Sum_probs=78.7
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
..++.+.+.+.....|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++++++++|+. ++.+
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v 91 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREI 91 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSE
T ss_pred CCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEE
Confidence 457899999987789999999877666789999999999999998 99999999999999999999999999998 7899
Q ss_pred EEEEEEecc
Q psy4897 253 ELEVKYLRE 261 (774)
Q Consensus 253 ~L~V~R~~~ 261 (774)
.|+|+|...
T Consensus 92 ~l~v~r~~~ 100 (104)
T 1wi2_A 92 SMRVRFFSG 100 (104)
T ss_dssp EEEEECCCC
T ss_pred EEEEEECCC
Confidence 999987644
No 136
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.31 E-value=2.4e-11 Score=110.71 Aligned_cols=86 Identities=29% Similarity=0.348 Sum_probs=73.4
Q ss_pred CcEEEEEEeecCCcccEEEEccCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc--
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-- 94 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a-- 94 (774)
..+.+.+ .+...+|||+|.++.+. ..+++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..
T Consensus 11 ~~~~~~l-~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 89 (111)
T 2koj_A 11 KRLNIQL-KKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKM 89 (111)
T ss_dssp EEEEEEE-ECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCC
T ss_pred cEEEEEE-EECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3444555 45668999999987543 26899999999999999977999999999999999999999999999985
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|.|+|.|+.
T Consensus 90 g~~v~l~v~R~~ 101 (111)
T 2koj_A 90 EGTVSLLVFRQE 101 (111)
T ss_dssp SSEEEEEEEECC
T ss_pred CCeEEEEEEeCC
Confidence 789999998865
No 137
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.31 E-value=7e-12 Score=116.58 Aligned_cols=89 Identities=25% Similarity=0.334 Sum_probs=78.0
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCC----CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKE----NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e----~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
..+.++|++.+.+..+|||+|.++.. ...+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++.
T Consensus 13 ~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 13 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp CEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 34677888878778999999998732 24679999999999999997799999999999999999999999999998
Q ss_pred c--CceEEEEeeecc
Q psy4897 94 A--GKVVELEVGVGY 106 (774)
Q Consensus 94 a--g~~V~L~V~R~~ 106 (774)
. ++.|+|+|.|+.
T Consensus 93 ~~~g~~v~l~v~R~~ 107 (122)
T 1v5q_A 93 SSITSKVTLEIEFDV 107 (122)
T ss_dssp HTTTTCEEEEEEEEC
T ss_pred CCCCCeEEEEEEECC
Confidence 6 789999998865
No 138
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.30 E-value=1.2e-11 Score=111.32 Aligned_cols=83 Identities=33% Similarity=0.445 Sum_probs=69.8
Q ss_pred EEEEEEeecCC---cccEEEEccCCC------------CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHH
Q psy4897 22 YSENYKYTENN---GLGISIKGGKEN------------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDE 86 (774)
Q Consensus 22 ~~V~l~rk~~~---gLGfsI~GG~e~------------~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~e 86 (774)
..+.+.+.... +|||+|.|+.+. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+
T Consensus 6 ~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 84 (104)
T 3sfj_A 6 QRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQ 84 (104)
T ss_dssp EEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred EEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 34555554333 799999988763 4689999999999999998 9999999999999999999999
Q ss_pred HHHHHHh-cCceEEEEeeec
Q psy4897 87 AVKALKR-AGKVVELEVGVG 105 (774)
Q Consensus 87 aV~lLk~-ag~~V~L~V~R~ 105 (774)
++.+++. .++.+.|+|.|+
T Consensus 85 ~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 85 ARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHHTCTTCSEEEEEEEEC
T ss_pred HHHHHHhCCCCEEEEEEEcC
Confidence 9999975 568899998763
No 139
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.30 E-value=4.7e-12 Score=117.67 Aligned_cols=88 Identities=35% Similarity=0.510 Sum_probs=74.9
Q ss_pred ceEEEEEeccCCCCcceEEeCCCC---CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKE---NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~---~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
..+.|.|.+....+|||++.++.+ ...+++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..++
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~ 103 (120)
T 2iwo_A 24 GLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNASG 103 (120)
T ss_dssp -CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCCS
T ss_pred CcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 578899998766799999998754 23579999999999999995599999999999999999999999999999998
Q ss_pred ceEEEEEEecc
Q psy4897 251 LVELEVKYLRE 261 (774)
Q Consensus 251 ~V~L~V~R~~~ 261 (774)
.++|+|.|...
T Consensus 104 ~v~l~v~r~g~ 114 (120)
T 2iwo_A 104 SIEMQVVAGGD 114 (120)
T ss_dssp EEEEEEECCTT
T ss_pred eEEEEEEECCc
Confidence 99999998754
No 140
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=6.1e-12 Score=113.66 Aligned_cols=87 Identities=24% Similarity=0.282 Sum_probs=76.9
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
.....+.|.+.+ ++.+|||+|.++.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.+++
T Consensus 5 ~~~~~r~v~l~k-~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 81 (106)
T 2eei_A 5 SSGQPRLCYLVK-EGGSYGFSLKTVQG-KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGS 81 (106)
T ss_dssp CCSSSEEEEEEC-CSSSCSCCEECCSS-CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCS
T ss_pred CCCCCEEEEEEE-CCCCCCEEEEeccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 345678888876 68899999987643 4689999999999999998 99999999999999999999999999998899
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.+.|+|.|..
T Consensus 82 ~v~l~v~r~~ 91 (106)
T 2eei_A 82 RVMFLLVDKE 91 (106)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEEcCc
Confidence 9999998764
No 141
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.30 E-value=2.4e-11 Score=108.32 Aligned_cols=85 Identities=27% Similarity=0.386 Sum_probs=73.7
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cC
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AG 249 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g 249 (774)
..+.+.|.+.|. ..+|||++.++ ....+||++|.++++|+++|.|++||+|++|||++|.+++|.+++++|++ .+
T Consensus 3 ~g~~k~V~l~K~-~~~LG~tI~~~--g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g 79 (95)
T 3gge_A 3 KGIEKEVNVYKS-EDSLGLTITDN--GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKE 79 (95)
T ss_dssp CEEEEEEEEECC-SSCCCEEEECS--SSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred CCeEEEEEEEEC-CCCceEEEEcC--CCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCC
Confidence 346788999996 58999999864 24568999999999999999999999999999999999999999999999 45
Q ss_pred cceEEEEEEe
Q psy4897 250 KLVELEVKYL 259 (774)
Q Consensus 250 ~~V~L~V~R~ 259 (774)
..++|.+.+-
T Consensus 80 ~~~~L~lv~p 89 (95)
T 3gge_A 80 ELFTMKLIEP 89 (95)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEECc
Confidence 6778877654
No 142
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=5e-12 Score=115.34 Aligned_cols=89 Identities=39% Similarity=0.504 Sum_probs=78.7
Q ss_pred cCCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcC
Q psy4897 16 FSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG 95 (774)
Q Consensus 16 ~~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag 95 (774)
.....++.|++.+. ..+|||+|.++.+ ..+++|..|.+++||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 11 ~~~~~~~~v~l~k~-~~glG~~l~~~~~-~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~ 88 (113)
T 1um7_A 11 GDAREPRKIILHKG-STGLGFNIVGGED-GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAG 88 (113)
T ss_dssp CCCCSEEEEEEECC-SSCSSBCCBCCST-TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCC
T ss_pred cCCCceEEEEEEEC-CCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 44677888988664 5899999998764 468999999999999999779999999999999999999999999999999
Q ss_pred ceEEEEeeecc
Q psy4897 96 KVVELEVGVGY 106 (774)
Q Consensus 96 ~~V~L~V~R~~ 106 (774)
+.+.|+|.|+.
T Consensus 89 ~~v~l~v~r~~ 99 (113)
T 1um7_A 89 QSVTIVAQYRP 99 (113)
T ss_dssp SEEEEEEECCH
T ss_pred CcEEEEEEECc
Confidence 99999998764
No 143
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.29 E-value=7.7e-12 Score=113.91 Aligned_cols=88 Identities=27% Similarity=0.345 Sum_probs=77.5
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC--CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc---
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN--KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--- 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~--~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~--- 248 (774)
+.+++.|.+....+|||++.++.+. ..+++|..|.+++||+++|+|++||+|++|||+++.++++++++++|+..
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 5788899887678999999987543 57899999999999999988999999999999999999999999999986
Q ss_pred CcceEEEEEEecc
Q psy4897 249 GKLVELEVKYLRE 261 (774)
Q Consensus 249 g~~V~L~V~R~~~ 261 (774)
++.|.|+|.|...
T Consensus 85 ~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 85 PGPIVLTVAKSGG 97 (108)
T ss_dssp SSCEEEEEECCCC
T ss_pred CCeEEEEEEeCCC
Confidence 5679999988644
No 144
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.29 E-value=1.4e-11 Score=114.82 Aligned_cols=89 Identities=25% Similarity=0.346 Sum_probs=81.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..+.+.+.+....+|||++.++.+...+++|..|.+++||+++|+|++||+|++|||+++.++++++++.++++.++.+.
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~ 98 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 98 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 57788898888889999999987767889999999999999998899999999999999999999999999999888899
Q ss_pred EEEEEeccc
Q psy4897 254 LEVKYLREV 262 (774)
Q Consensus 254 L~V~R~~~~ 262 (774)
|+|.|.+..
T Consensus 99 l~v~r~~~~ 107 (125)
T 3hpk_A 99 IHYNKLQAD 107 (125)
T ss_dssp EEEEEECSC
T ss_pred EEEEECCCC
Confidence 999986554
No 145
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.29 E-value=2.9e-11 Score=112.40 Aligned_cols=79 Identities=32% Similarity=0.388 Sum_probs=69.7
Q ss_pred eecCCcccEEEEccCCC---CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc--CceEEEEe
Q psy4897 28 YTENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GKVVELEV 102 (774)
Q Consensus 28 rk~~~gLGfsI~GG~e~---~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a--g~~V~L~V 102 (774)
.++..+|||+|.++.+. ..+++|..|.|+|||+++|+|++||+|++|||++|.++++.+++.+++.. ++.|.|+|
T Consensus 37 ~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v 116 (121)
T 2kom_A 37 KKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLV 116 (121)
T ss_dssp ECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEE
T ss_pred EcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEE
Confidence 45678999999987643 26899999999999999977999999999999999999999999999975 78999999
Q ss_pred eecc
Q psy4897 103 GVGY 106 (774)
Q Consensus 103 ~R~~ 106 (774)
.|+.
T Consensus 117 ~R~g 120 (121)
T 2kom_A 117 FRQE 120 (121)
T ss_dssp EECC
T ss_pred EeCC
Confidence 8753
No 146
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=111.88 Aligned_cols=82 Identities=22% Similarity=0.325 Sum_probs=71.7
Q ss_pred CcEEEEEEeecCCcccEEEEccC-------CCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH
Q psy4897 20 DFYSENYKYTENNGLGISIKGGK-------ENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 92 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~-------e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk 92 (774)
..+.+.+.+..+++|||+|.+.. +...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 44567788888899999999832 334689999999999999998 9999999999999999999999999999
Q ss_pred hcCceEEEEe
Q psy4897 93 RAGKVVELEV 102 (774)
Q Consensus 93 ~ag~~V~L~V 102 (774)
..+..|+|+|
T Consensus 94 ~~~~~v~l~v 103 (104)
T 2z17_A 94 SSGNLLTIET 103 (104)
T ss_dssp HTTTEEEEEC
T ss_pred hCCCcEEEEE
Confidence 9877888776
No 147
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=4e-12 Score=113.96 Aligned_cols=87 Identities=39% Similarity=0.499 Sum_probs=74.9
Q ss_pred CCCcEEEEEEee-cCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 18 SRDFYSENYKYT-ENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 18 s~~~~~V~l~rk-~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
..+++++.+.+. ...+|||+|.++.+...+++|..|.+++||+++| |++||+|++|||++|.++++.+++..++. ++
T Consensus 6 ~~~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~ 83 (101)
T 1uez_A 6 SGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG-SK 83 (101)
T ss_dssp SCCCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS-SS
T ss_pred CCccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC-CC
Confidence 456788888774 5789999999988777899999999999999998 99999999999999999999877766654 46
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.|.|+|.|+.
T Consensus 84 ~v~l~v~R~g 93 (101)
T 1uez_A 84 KLVLSVYSAG 93 (101)
T ss_dssp SCCEEECCCC
T ss_pred eEEEEEEECC
Confidence 7889998765
No 148
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.29 E-value=2e-11 Score=114.86 Aligned_cols=89 Identities=31% Similarity=0.489 Sum_probs=77.2
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCC---CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKE---NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~---~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
....+.+.+.+. ..+|||.+.++.+ ...+++|..|.+++||+++|+|++||+|++|||+++.+++|++++++|+..
T Consensus 27 ~~~~~~v~l~k~-~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 105 (130)
T 1i16_A 27 EATVCTVTLEKM-SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL 105 (130)
T ss_dssp SEEEEEEEEETT-SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS
T ss_pred CCcEEEEEEEcC-CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345778888885 6789999999876 356899999999999999966999999999999999999999999999986
Q ss_pred C-cceEEEEEEecc
Q psy4897 249 G-KLVELEVKYLRE 261 (774)
Q Consensus 249 g-~~V~L~V~R~~~ 261 (774)
+ ..+.|+|.|...
T Consensus 106 ~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 106 PDGPVTIVIRRKSL 119 (130)
T ss_dssp CSSEEEEEEEEESS
T ss_pred CCceEEEEEEeCCC
Confidence 4 569999988643
No 149
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=1.5e-11 Score=108.14 Aligned_cols=87 Identities=38% Similarity=0.577 Sum_probs=77.3
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
.+|++++.+. ..+|||.+.++.+...+++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 5 ~~r~v~l~k~-~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 83 (93)
T 2dkr_A 5 SSGVVELPKT-DEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVK 83 (93)
T ss_dssp CSCEEEEECC-TTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEEeC-CCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 4678888885 589999999877667899999999999999996699999999999999999999999999998888899
Q ss_pred EEEEEecc
Q psy4897 254 LEVKYLRE 261 (774)
Q Consensus 254 L~V~R~~~ 261 (774)
|+|.|.+.
T Consensus 84 l~v~r~~~ 91 (93)
T 2dkr_A 84 LVVRSGPS 91 (93)
T ss_dssp EEECCCCS
T ss_pred EEEEeCCC
Confidence 99987543
No 150
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.28 E-value=1.6e-11 Score=112.45 Aligned_cols=86 Identities=29% Similarity=0.408 Sum_probs=77.0
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
.....+|.+.+++..+|||+|.++.+...+++|..|.+++||+++| |++||+|++|||++|.++++.+++.+++.. ..
T Consensus 13 ~~~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~ 90 (114)
T 1x5n_A 13 ENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RS 90 (114)
T ss_dssp CCSSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-SS
T ss_pred CCCcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-Ce
Confidence 3345788888999999999999987777899999999999999998 999999999999999999998888888876 57
Q ss_pred EEEEeeec
Q psy4897 98 VELEVGVG 105 (774)
Q Consensus 98 V~L~V~R~ 105 (774)
+.|+|.|+
T Consensus 91 v~l~v~r~ 98 (114)
T 1x5n_A 91 LTISIVAA 98 (114)
T ss_dssp EEEEECSS
T ss_pred EEEEEEcC
Confidence 89999876
No 151
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.28 E-value=1.8e-11 Score=107.20 Aligned_cols=86 Identities=31% Similarity=0.451 Sum_probs=75.4
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcC--cc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG--KL 251 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g--~~ 251 (774)
+.+.+.+.+. ..+|||.+.++.+...|++|..|.+++||+++|.|++||+|++|||+++.+.++.+++.+|+..+ ..
T Consensus 2 ~~~~v~l~~~-~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 80 (90)
T 2q9v_A 2 MEQDIFLWRK-ETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGH 80 (90)
T ss_dssp EEEEEEEECB-TTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred CcEEEEEEEC-CCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 3677888886 47899999988766678999999999999999889999999999999999999999999999854 48
Q ss_pred eEEEEEEec
Q psy4897 252 VELEVKYLR 260 (774)
Q Consensus 252 V~L~V~R~~ 260 (774)
+.|+|.|.+
T Consensus 81 v~l~v~R~~ 89 (90)
T 2q9v_A 81 VNLTVRQTR 89 (90)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 999998753
No 152
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.28 E-value=2.5e-12 Score=111.07 Aligned_cols=80 Identities=28% Similarity=0.498 Sum_probs=70.2
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
.+++|++.+. ..+|||++.++ .+++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+++..++.+.
T Consensus 2 ~~r~v~l~~~-~~g~G~~~~~~----~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 75 (83)
T 2kv8_A 2 RVRSVEVARG-RAGYGFTLSGQ----APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLH 75 (83)
T ss_dssp CEEEEEECCC-SSCCSCBCCCS----SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEE
T ss_pred CcEEEEEEeC-CCcccEEEEcC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 3567777554 48899998764 379999999999999998 99999999999999999999999999998888899
Q ss_pred EEeeec
Q psy4897 100 LEVGVG 105 (774)
Q Consensus 100 L~V~R~ 105 (774)
|+|.|+
T Consensus 76 l~v~R~ 81 (83)
T 2kv8_A 76 MVIAEG 81 (83)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999875
No 153
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=3.7e-11 Score=108.88 Aligned_cols=89 Identities=31% Similarity=0.468 Sum_probs=78.0
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCCC--------CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHH
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKEN--------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVK 243 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~~--------~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~ 243 (774)
..+.+++.+.+. ..+|||.+.++.+. ..+++|..|.+++||+++|+|++||+|++|||+++.++++.+++.
T Consensus 6 ~~~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~ 84 (107)
T 1uhp_A 6 SGKSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVE 84 (107)
T ss_dssp SSEEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHH
T ss_pred CcEEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 346788999886 78999999987542 468999999999999999459999999999999999999999999
Q ss_pred HHHHcCcceEEEEEEecc
Q psy4897 244 ALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 244 ~Lk~~g~~V~L~V~R~~~ 261 (774)
+++..++.+.|+|.|...
T Consensus 85 ~~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 85 AFKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHHHCCSSEEEEEEECCS
T ss_pred HHHcCCCcEEEEEEeCCC
Confidence 999999999999987543
No 154
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.28 E-value=1.8e-11 Score=108.88 Aligned_cols=87 Identities=30% Similarity=0.475 Sum_probs=77.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCC------CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENK------MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 247 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~------~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~ 247 (774)
..+.+++.+....+|||++.++.+.. .+++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++.
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 36788899877889999998865433 379999999999999997799999999999999999999999999999
Q ss_pred cCcceEEEEEEec
Q psy4897 248 AGKLVELEVKYLR 260 (774)
Q Consensus 248 ~g~~V~L~V~R~~ 260 (774)
.++.+.|+|.|.+
T Consensus 85 ~g~~v~l~v~R~g 97 (98)
T 1ihj_A 85 ADFKIELEIQTFD 97 (98)
T ss_dssp SCSEEEEEEEEC-
T ss_pred CCCeEEEEEEeCC
Confidence 9999999999864
No 155
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.27 E-value=1.6e-11 Score=107.22 Aligned_cols=83 Identities=22% Similarity=0.252 Sum_probs=68.9
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCc
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGK 96 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~ 96 (774)
.++++|++.+ +..+|||++.+..+ ..+++|..| ++|||+ +| |++||+|++|||+++.++++.+++.++++ .++
T Consensus 2 ~~~~~v~l~k-~~~g~G~~~~~~~~-~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 76 (88)
T 3bpu_A 2 MELITVHIVK-GPMGFGFTIADSPG-GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGS 76 (88)
T ss_dssp EEEEEEEEEC-BTTBSSCEEEECTT-SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred CcEEEEEEEc-CCCceeEEEEecCC-CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCC
Confidence 3577888866 55899999996543 358999887 999999 76 99999999999999999999999999985 588
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.+.|+|.|+.
T Consensus 77 ~v~l~v~R~g 86 (88)
T 3bpu_A 77 EVTLLVQRQT 86 (88)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEeCC
Confidence 9999998764
No 156
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=1.8e-11 Score=110.27 Aligned_cols=88 Identities=26% Similarity=0.400 Sum_probs=78.1
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--Cc
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GK 250 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~--g~ 250 (774)
.+.+.+.+.+ ...+|||.+.++.+...+++|..|.+++||+++|.|++||+|++|||++|.++++++++++|+.. +.
T Consensus 8 ~~~~~v~l~~-~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~ 86 (103)
T 1uep_A 8 YKELDVHLRR-MESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNG 86 (103)
T ss_dssp EEEECCEEES-SSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred ceEEEEEEEe-CCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 3466777887 46789999998876678899999999999999988999999999999999999999999999985 78
Q ss_pred ceEEEEEEecc
Q psy4897 251 LVELEVKYLRE 261 (774)
Q Consensus 251 ~V~L~V~R~~~ 261 (774)
.|.|+|.|...
T Consensus 87 ~v~l~v~R~~~ 97 (103)
T 1uep_A 87 QVNLTVRRKVL 97 (103)
T ss_dssp EEEEEEEEECC
T ss_pred cEEEEEEeCCC
Confidence 99999998754
No 157
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=3.7e-11 Score=109.71 Aligned_cols=87 Identities=26% Similarity=0.369 Sum_probs=75.0
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCC--CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKEN--KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-- 248 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~--~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~-- 248 (774)
...+.+.+.+. .+|||++.++.+. ..+++|..|.+++||+++|+|++||+|++|||+++.+++|++++++|+..
T Consensus 14 ~~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~ 91 (109)
T 1wi4_A 14 PAFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKL 91 (109)
T ss_dssp TTEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCC
T ss_pred CcEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcccc
Confidence 35778888874 7999999987653 34799999999999999988999999999999999999999999999984
Q ss_pred --CcceEEEEEEecc
Q psy4897 249 --GKLVELEVKYLRE 261 (774)
Q Consensus 249 --g~~V~L~V~R~~~ 261 (774)
+..++|.+.|...
T Consensus 92 r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 92 RSESPWEIAFIRSGP 106 (109)
T ss_dssp SSSSCEEEEEECCCC
T ss_pred CCCceEEEEEEeCCC
Confidence 5788888887543
No 158
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.26 E-value=1.5e-11 Score=111.27 Aligned_cols=86 Identities=35% Similarity=0.591 Sum_probs=76.9
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhcc-CCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc-
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTE-QLYVGDAILSVNGEDLREATHDEAVKALKRAGK- 250 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG-~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~- 250 (774)
...+.+.+.+....+|||.+.++.+...+++|..|.+++||+++| +|++||+|++|||++|.++++.+++.+|+..+.
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~ 95 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCER 95 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGS
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcccc
Confidence 457889998877789999999876666789999999999999998 499999999999999999999999999998764
Q ss_pred ---ceEEEEEE
Q psy4897 251 ---LVELEVKY 258 (774)
Q Consensus 251 ---~V~L~V~R 258 (774)
.+.|+|.|
T Consensus 96 ~~~~v~l~v~r 106 (107)
T 3nfk_A 96 HSGELMLLVRP 106 (107)
T ss_dssp BTTBEEEEEEC
T ss_pred CCcEEEEEEEc
Confidence 89999876
No 159
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.26 E-value=2.8e-11 Score=107.55 Aligned_cols=84 Identities=27% Similarity=0.517 Sum_probs=73.7
Q ss_pred ceEEEEEeccCCCCcceEEeC-------CCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKG-------GKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 246 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~g-------g~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk 246 (774)
+++++.+.+....+|||.+.+ +.+...+++|..|.+++||+++| |++||+|++|||+++.+++++++.++|+
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~ 82 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIK 82 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 478899999877899999986 33334589999999999999998 9999999999999999999999999999
Q ss_pred HcCcceEEEEEE
Q psy4897 247 RAGKLVELEVKY 258 (774)
Q Consensus 247 ~~g~~V~L~V~R 258 (774)
..++.+.|+|.+
T Consensus 83 ~~~~~v~l~v~~ 94 (96)
T 2ego_A 83 ASGNVLRLETLY 94 (96)
T ss_dssp HTTTEEEEEEEC
T ss_pred hCCCeEEEEEEE
Confidence 988899998875
No 160
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.26 E-value=2.7e-11 Score=111.62 Aligned_cols=83 Identities=20% Similarity=0.201 Sum_probs=70.5
Q ss_pred CCCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc--
Q psy4897 17 SSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-- 94 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a-- 94 (774)
...++++|+|.|. ..||||+|.++ ..+.+|..|.+ +|+.+| |++||+|++|||++|.+++|.+++.+|+.+
T Consensus 9 ~~~~~~~V~L~Kg-~~G~GFsI~~~---~~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~ 81 (113)
T 3soe_A 9 KAGLLVTIPLIKG-PKGFGFAIADS---PTGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPV 81 (113)
T ss_dssp HHCEEEEEEEECB-TTBSSEEEEEE---TTEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred CCCCEEEEEEEEC-CCcccEEEeCC---CCCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3457788999764 77999999765 34678999998 466655 999999999999999999999999999986
Q ss_pred CceEEEEeeecc
Q psy4897 95 GKVVELEVGVGY 106 (774)
Q Consensus 95 g~~V~L~V~R~~ 106 (774)
++.|+|+|.|..
T Consensus 82 G~~v~L~V~R~g 93 (113)
T 3soe_A 82 GADVPLLILRGG 93 (113)
T ss_dssp TCEEEEEEEESS
T ss_pred CCEEEEEEEECC
Confidence 779999999976
No 161
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.26 E-value=4.5e-11 Score=107.01 Aligned_cols=87 Identities=37% Similarity=0.540 Sum_probs=77.6
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
..+.+++.+.. .+|||++.++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus 7 ~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 7 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred ccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 47888898864 8999999987653 36899999999999999977999999999999999999999999999988
Q ss_pred CcceEEEEEEecc
Q psy4897 249 GKLVELEVKYLRE 261 (774)
Q Consensus 249 g~~V~L~V~R~~~ 261 (774)
++.+.|+|.|.+.
T Consensus 86 g~~v~l~v~R~~~ 98 (101)
T 2jik_A 86 GYAVSLRVQHRLE 98 (101)
T ss_dssp CSEEEEEEEEESC
T ss_pred CCeEEEEEEeCCC
Confidence 8899999988754
No 162
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=2.2e-12 Score=116.33 Aligned_cols=80 Identities=25% Similarity=0.384 Sum_probs=73.0
Q ss_pred EEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeec
Q psy4897 26 YKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVG 105 (774)
Q Consensus 26 l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~ 105 (774)
+..++..+|||+|.++.+...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..++.+.|+|.|+
T Consensus 9 v~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 87 (103)
T 1v5l_A 9 VVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRA 87 (103)
T ss_dssp CEEESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCC
T ss_pred EEEcCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEEC
Confidence 34457789999999988776789999999999999998 99999999999999999999999999998899999999887
Q ss_pred c
Q psy4897 106 Y 106 (774)
Q Consensus 106 ~ 106 (774)
.
T Consensus 88 g 88 (103)
T 1v5l_A 88 E 88 (103)
T ss_dssp T
T ss_pred C
Confidence 5
No 163
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=2.8e-11 Score=106.08 Aligned_cols=85 Identities=20% Similarity=0.354 Sum_probs=73.7
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEE
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVEL 254 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L 254 (774)
.|.|.+.|....++||++.+.. ..+++|.+|.+++||+++++|++||+|++|||+++.++++++++++|+..+..++|
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~--~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l 79 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE--LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF 79 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC--GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEE
T ss_pred eEEEEEEeCCCCceeEEEEeCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEE
Confidence 5789999987789999998742 35799999999999999445999999999999999988999999999987668889
Q ss_pred EEEEecc
Q psy4897 255 EVKYLRE 261 (774)
Q Consensus 255 ~V~R~~~ 261 (774)
+|.|...
T Consensus 80 ~v~r~~~ 86 (88)
T 1kwa_A 80 KIVPSYR 86 (88)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 8887543
No 164
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=2.3e-11 Score=112.26 Aligned_cols=90 Identities=31% Similarity=0.408 Sum_probs=77.7
Q ss_pred ccceEEEEEeccC------CCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHH
Q psy4897 172 ENQKRIIRVKKSE------NNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDE 240 (774)
Q Consensus 172 ~~~~r~V~L~k~~------~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e 240 (774)
....+.+.+.+.. ..+|||++.++.+. ..+++|..|.+++||+++|+|++||+|++|||+++.++++.+
T Consensus 10 ~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~ 89 (117)
T 1ujd_A 10 IFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE 89 (117)
T ss_dssp SSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH
T ss_pred CCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH
Confidence 3346778887765 47899999887542 247999999999999999889999999999999999999999
Q ss_pred HHHHHHHcCcceEEEEEEecc
Q psy4897 241 AVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 241 ~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
++.+|+.+++.+.|+|.|...
T Consensus 90 ~~~~l~~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 90 VQSIISQQSGEAEICVRLDLN 110 (117)
T ss_dssp HHHHHSCCSSCEEEEEESSCC
T ss_pred HHHHHhcCCCEEEEEEEECCc
Confidence 999999989999999988654
No 165
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.25 E-value=4.9e-11 Score=104.81 Aligned_cols=86 Identities=38% Similarity=0.538 Sum_probs=76.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
+.+.+++.+....+|||.+.++.+ ..+++|..|.++|||+++|.|++||+|++|||+++.+.+++++..+++..++.+.
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 82 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRN-DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVT 82 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSS-SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred eEEEEEEEeCCCCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 367788888777899999988643 4689999999999999998899999999999999999999999999999889999
Q ss_pred EEEEEec
Q psy4897 254 LEVKYLR 260 (774)
Q Consensus 254 L~V~R~~ 260 (774)
|+|.|..
T Consensus 83 l~v~R~~ 89 (92)
T 2qg1_A 83 LEVGRIS 89 (92)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 9998764
No 166
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.25 E-value=2.9e-11 Score=105.30 Aligned_cols=83 Identities=24% Similarity=0.452 Sum_probs=73.0
Q ss_pred EEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEE
Q psy4897 178 IRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVK 257 (774)
Q Consensus 178 V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~ 257 (774)
+++......+|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.+++++++.++|+..++.+.|+|.
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~ 82 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLD 82 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEE
T ss_pred EEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 3444456789999999876666789999999999999998 999999999999999999999999999987789999999
Q ss_pred Eecc
Q psy4897 258 YLRE 261 (774)
Q Consensus 258 R~~~ 261 (774)
|.+.
T Consensus 83 R~~~ 86 (87)
T 2pa1_A 83 RITS 86 (87)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 8653
No 167
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=3.1e-11 Score=111.44 Aligned_cols=88 Identities=26% Similarity=0.354 Sum_probs=78.3
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCC-CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENK-MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~-~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
..+.+.+.+....+|||.+.++.+.. .+++|..|.+++||+++|.|++||+|++|||+++.+.++++++++|+..+..+
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v 94 (117)
T 1v62_A 15 GPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKV 94 (117)
T ss_dssp SSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSEE
T ss_pred CcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 57889999987789999998865433 34999999999999999889999999999999999999999999999889999
Q ss_pred EEEEEEecc
Q psy4897 253 ELEVKYLRE 261 (774)
Q Consensus 253 ~L~V~R~~~ 261 (774)
.|+|.|...
T Consensus 95 ~l~v~r~~~ 103 (117)
T 1v62_A 95 RLEILPVPQ 103 (117)
T ss_dssp EEEECCBTT
T ss_pred EEEEEECCC
Confidence 999987654
No 168
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.24 E-value=6.4e-11 Score=106.18 Aligned_cols=88 Identities=41% Similarity=0.554 Sum_probs=77.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
+.+.+.+.+. ..+|||++.++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus 4 ~~~~v~l~k~-~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 82 (102)
T 2i1n_A 4 KYEEIVLERG-NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA 82 (102)
T ss_dssp EEEEEEEECB-TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred eEEEEEEEEC-CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3577888875 67899999987543 46899999999999999988999999999999999999999999999999
Q ss_pred CcceEEEEEEeccc
Q psy4897 249 GKLVELEVKYLREV 262 (774)
Q Consensus 249 g~~V~L~V~R~~~~ 262 (774)
+..+.|+|.|.+..
T Consensus 83 g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 83 GPVVRLVVRRRQPP 96 (102)
T ss_dssp CSEEEEEEEEECCC
T ss_pred CCeEEEEEEeCCCC
Confidence 99999999987653
No 169
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.24 E-value=4.3e-11 Score=105.77 Aligned_cols=81 Identities=26% Similarity=0.356 Sum_probs=70.0
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
...++|.+. ++..+|||.+.+. .+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++ .++.|
T Consensus 7 ~~~r~v~l~-~~~~~~G~~l~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v 79 (93)
T 2dls_A 7 GVQRCVIIQ-KDQHGFGFTVSGD----RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYV 79 (93)
T ss_dssp CCEEEEEEE-CSSSSCCEEEECS----SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEE
T ss_pred CCCEEEEEE-eCCCceeEEEeCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEE
Confidence 345667764 5668999999863 579999999999999998 9999999999999999999998888776 68999
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|+.
T Consensus 80 ~l~v~R~~ 87 (93)
T 2dls_A 80 ALTLLGSS 87 (93)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 99998864
No 170
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=5.6e-11 Score=104.93 Aligned_cols=75 Identities=21% Similarity=0.371 Sum_probs=65.4
Q ss_pred EEEEEE-eecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEE
Q psy4897 22 YSENYK-YTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVEL 100 (774)
Q Consensus 22 ~~V~l~-rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L 100 (774)
..+.+. .+...+|||.+.+| +|.+|.++|||+++| |++||+|++|||++|.+.++.+++.+++++++.|.|
T Consensus 13 ~~~~i~~~~~~~~lG~~~~~G-------~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l 84 (90)
T 1y7n_A 13 TTVLIRRPDLRYQLGFSVQNG-------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHM 84 (90)
T ss_dssp EEEEEEESSTTSCCCEEEETT-------EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEE
T ss_pred ceEEEEeCCCccccCeEecCC-------EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 344444 44568999999754 899999999999998 999999999999999999999999999999999999
Q ss_pred Eeee
Q psy4897 101 EVGV 104 (774)
Q Consensus 101 ~V~R 104 (774)
+|.+
T Consensus 85 ~v~p 88 (90)
T 1y7n_A 85 KTMP 88 (90)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9864
No 171
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.24 E-value=7e-11 Score=105.06 Aligned_cols=88 Identities=33% Similarity=0.492 Sum_probs=76.5
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..+.+.+.+ ..++|||.+.++.+...+++|..|.+++||+++|.|++||+|++|||+++.++++++++.+++..++.+.
T Consensus 5 ~~~~v~l~~-~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 83 (97)
T 1n7e_A 5 IIYTVELKR-YGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVT 83 (97)
T ss_dssp CEEEEEEEC-TTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred eEEEEEEEe-CCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 356777766 4677999999876555789999999999999997799999999999999999999999999998889999
Q ss_pred EEEEEeccc
Q psy4897 254 LEVKYLREV 262 (774)
Q Consensus 254 L~V~R~~~~ 262 (774)
|+|.|.+..
T Consensus 84 l~v~R~~~~ 92 (97)
T 1n7e_A 84 LKIKKQTDA 92 (97)
T ss_dssp EEEECCCCC
T ss_pred EEEEeCCCC
Confidence 999886543
No 172
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.24 E-value=3e-11 Score=115.22 Aligned_cols=88 Identities=31% Similarity=0.388 Sum_probs=75.6
Q ss_pred CCCcEEEEEEeecC---CcccEEEEccCC------------CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCC
Q psy4897 18 SRDFYSENYKYTEN---NGLGISIKGGKE------------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREA 82 (774)
Q Consensus 18 s~~~~~V~l~rk~~---~gLGfsI~GG~e------------~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~ 82 (774)
+..+++|.+.+.+. .+|||+|.+|.+ ...|++|..|.++|||+++| |++||+|++|||++|.++
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~ 99 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMV 99 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTC
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCC
Confidence 44667788876543 489999998865 24689999999999999998 999999999999999999
Q ss_pred CHHHHHHHHHh-cCceEEEEeeecc
Q psy4897 83 THDEAVKALKR-AGKVVELEVGVGY 106 (774)
Q Consensus 83 sh~eaV~lLk~-ag~~V~L~V~R~~ 106 (774)
++.+++.+++. .|+.|.|+|.|++
T Consensus 100 ~~~~~~~~l~~~~g~~v~l~v~R~g 124 (139)
T 2vz5_A 100 THDQARKRLTKRSEEVVRLLVTRQS 124 (139)
T ss_dssp CHHHHHHHHCCTTCSEEEEEEEECC
T ss_pred CHHHHHHHHHhCCCCEEEEEEEECC
Confidence 99999999986 5789999999875
No 173
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=5.1e-11 Score=110.12 Aligned_cols=87 Identities=40% Similarity=0.528 Sum_probs=76.6
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
+.+.+.+.+. ..+|||++.++.+. ..+++|..|.+++||+++|+|++||+|++|||++|.++++++++.+++..
T Consensus 24 ~~~~v~l~k~-~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 24 TVVEIKLFKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEECB-TTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEeC-CCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4567788775 48999999987542 35899999999999999988999999999999999999999999999998
Q ss_pred CcceEEEEEEecc
Q psy4897 249 GKLVELEVKYLRE 261 (774)
Q Consensus 249 g~~V~L~V~R~~~ 261 (774)
+..|.|+|.|.+.
T Consensus 103 g~~v~l~v~R~~~ 115 (117)
T 2byg_A 103 SEVVYLKVGKPTT 115 (117)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCc
Confidence 9999999998754
No 174
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.24 E-value=2.7e-11 Score=105.93 Aligned_cols=83 Identities=28% Similarity=0.426 Sum_probs=72.4
Q ss_pred EEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEE
Q psy4897 176 RIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELE 255 (774)
Q Consensus 176 r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~ 255 (774)
..+++. ...+|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..++.+.|+
T Consensus 5 ~~v~~~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 81 (89)
T 2q3g_A 5 FKVVLE--GPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLG 81 (89)
T ss_dssp EEEEEE--SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEE
T ss_pred EEEEEc--CCCcccEEEECcCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEE
Confidence 344444 4588999999876666789999999999999998 9999999999999999999999999999888899999
Q ss_pred EEEecc
Q psy4897 256 VKYLRE 261 (774)
Q Consensus 256 V~R~~~ 261 (774)
|.|...
T Consensus 82 v~R~~~ 87 (89)
T 2q3g_A 82 LSRAIT 87 (89)
T ss_dssp EEEECC
T ss_pred EEeCCC
Confidence 988653
No 175
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=9.1e-11 Score=108.56 Aligned_cols=88 Identities=35% Similarity=0.518 Sum_probs=78.7
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 247 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~ 247 (774)
...+.|.|.+.. .+|||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++.
T Consensus 16 ~~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 94 (120)
T 2eno_A 16 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 94 (120)
T ss_dssp EEEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH
T ss_pred CceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 357788888864 8999999987653 5689999999999999998899999999999999999999999999998
Q ss_pred cCcceEEEEEEecc
Q psy4897 248 AGKLVELEVKYLRE 261 (774)
Q Consensus 248 ~g~~V~L~V~R~~~ 261 (774)
.++.+.|+|.|...
T Consensus 95 ~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 95 AGYAVSLRVQHRLQ 108 (120)
T ss_dssp HCSEEEEEEEEEEE
T ss_pred CCCeEEEEEEeCCc
Confidence 88999999998765
No 176
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=1.5e-10 Score=107.64 Aligned_cols=89 Identities=26% Similarity=0.320 Sum_probs=78.4
Q ss_pred cccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--c
Q psy4897 171 VENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--A 248 (774)
Q Consensus 171 ~~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~ 248 (774)
...+.+.+.+.+. ..+|||.+.++.+...+++|..|.+++||+++|.|++||+|++|||++|.++++++++++|+. .
T Consensus 16 ~~~~~~~v~l~~~-~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 94 (123)
T 1ueq_A 16 LKGTFLSTTLKKS-NMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPI 94 (123)
T ss_dssp CCSEEEEEEEECC-TTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCT
T ss_pred CCCcEEEEEEEeC-CCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3445677888875 678999999877667789999999999999998899999999999999999999999999998 5
Q ss_pred CcceEEEEEEec
Q psy4897 249 GKLVELEVKYLR 260 (774)
Q Consensus 249 g~~V~L~V~R~~ 260 (774)
++.+.|+|.|..
T Consensus 95 g~~v~l~v~R~~ 106 (123)
T 1ueq_A 95 GQSVNLVLCRGY 106 (123)
T ss_dssp TCEEEEEEEESC
T ss_pred CCeEEEEEEeCC
Confidence 789999998864
No 177
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.23 E-value=6.1e-11 Score=108.13 Aligned_cols=85 Identities=29% Similarity=0.396 Sum_probs=75.6
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCC-CCCCEEEEECCEecCCCCHHHHHHHHHhc-Cce
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQL-YVGDAILSVNGEDLREATHDEAVKALKRA-GKV 97 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~L-qvGD~ILsVNG~~V~~~sh~eaV~lLk~a-g~~ 97 (774)
++++|.+.+....+|||++.++.+ ..+++|..|.++|||+++| | ++||+|++|||+++.++++.++..+++.. ++.
T Consensus 1 n~~~v~l~~~~~~glG~~~~~~~~-~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~ 78 (112)
T 1qau_A 1 NVISVRLFKRKVGGLGFLVKERVS-KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASET 78 (112)
T ss_dssp CEEEEEEECBTTTBTSEEEEECSS-SSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSS
T ss_pred CEEEEEEEcCCCCceeEEEEecCC-CCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCc
Confidence 367899988888999999997653 4589999999999999998 7 99999999999999999999999999874 688
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
+.|.|.|++
T Consensus 79 v~l~v~R~g 87 (112)
T 1qau_A 79 HVVLILRGP 87 (112)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEeCC
Confidence 999999875
No 178
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=2.2e-11 Score=112.61 Aligned_cols=87 Identities=39% Similarity=0.576 Sum_probs=76.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC---CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~---~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
+.+.+.|.+.. .+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..++
T Consensus 25 ~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 103 (117)
T 2fne_A 25 QCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG 103 (117)
T ss_dssp EEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred ccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 57889998864 7899999986432 3579999999999999998899999999999999999999999999999888
Q ss_pred ceEEEEEEecc
Q psy4897 251 LVELEVKYLRE 261 (774)
Q Consensus 251 ~V~L~V~R~~~ 261 (774)
.|.|+|.|.++
T Consensus 104 ~v~l~v~R~g~ 114 (117)
T 2fne_A 104 TVTLMVLSSDE 114 (117)
T ss_dssp SEEEEEEECSC
T ss_pred eEEEEEEeCCc
Confidence 89999998654
No 179
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.23 E-value=3.9e-11 Score=113.33 Aligned_cols=87 Identities=20% Similarity=0.431 Sum_probs=77.0
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCCC------------CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHH
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKENK------------MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDE 240 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~~------------~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e 240 (774)
.+.+.+++.+....+|||++.++.... .+++|..|.+++||+++| |++||+|++|||++|.++++++
T Consensus 26 ~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~ 104 (132)
T 3l4f_D 26 IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 104 (132)
T ss_dssp CCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHH
T ss_pred CCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 357789999877789999999875421 269999999999999998 9999999999999999999999
Q ss_pred HHHHHHHcCcceEEEEEEec
Q psy4897 241 AVKALKRAGKLVELEVKYLR 260 (774)
Q Consensus 241 ~v~~Lk~~g~~V~L~V~R~~ 260 (774)
++.+|+..++.+.|+|.+..
T Consensus 105 ~~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 105 VVNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHHHTTTEEEEEEECCC
T ss_pred HHHHHHcCCCEEEEEEEECC
Confidence 99999999999999998654
No 180
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.23 E-value=4.8e-11 Score=107.73 Aligned_cols=88 Identities=40% Similarity=0.566 Sum_probs=76.7
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
+.+.|++.+. ..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.+.++.+++..++..
T Consensus 3 ~~~~v~l~k~-~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (105)
T 2awx_A 3 KIMEIKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT 81 (105)
T ss_dssp CEEEEEEECB-TTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred eEEEEEEEEC-CCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4677888886 47999999987543 35899999999999999988999999999999999999999999999988
Q ss_pred CcceEEEEEEeccc
Q psy4897 249 GKLVELEVKYLREV 262 (774)
Q Consensus 249 g~~V~L~V~R~~~~ 262 (774)
++.+.|+|.|....
T Consensus 82 ~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 82 SDFVYLKVAKPTSM 95 (105)
T ss_dssp CSEEEEEEECCCC-
T ss_pred CCeEEEEEEcCCCC
Confidence 89999999886543
No 181
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.23 E-value=4.3e-11 Score=106.10 Aligned_cols=87 Identities=22% Similarity=0.416 Sum_probs=76.1
Q ss_pred ceEEEEEeccCCCCcceEEeC--CCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcc
Q psy4897 174 QKRIIRVKKSENNGLGISIKG--GKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKL 251 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~g--g~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~ 251 (774)
++|++.+.+. ..+|||.+.+ +.+...+++|..|.+++||+++| |++||+|++|||+++.+++++++..+++..++.
T Consensus 3 ~~r~v~l~k~-~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 80 (96)
T 2v90_A 3 KPRCLHLEKG-PQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGSC 80 (96)
T ss_dssp CCEEEEEECB-TTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCEEEEEEeC-CCcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 4788999886 4699999987 33334579999999999999998 999999999999999999999999999988899
Q ss_pred eEEEEEEeccc
Q psy4897 252 VELEVKYLREV 262 (774)
Q Consensus 252 V~L~V~R~~~~ 262 (774)
+.|+|.|....
T Consensus 81 v~l~v~r~~~~ 91 (96)
T 2v90_A 81 VSLTVVDPEAD 91 (96)
T ss_dssp EEEEEECCCTT
T ss_pred EEEEEECCCCc
Confidence 99999987553
No 182
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.23 E-value=3.3e-11 Score=109.38 Aligned_cols=82 Identities=40% Similarity=0.559 Sum_probs=71.3
Q ss_pred eccCCCCcceEEeCCCCCC-----CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEE
Q psy4897 181 KKSENNGLGISIKGGKENK-----MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELE 255 (774)
Q Consensus 181 ~k~~~~~LGfsi~gg~~~~-----~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~ 255 (774)
.+....+|||++.+|.+.. .+++|..|.+++||+++|.|++||+|++|||++|.++++++++.+++..++.+.|+
T Consensus 8 ~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~ 87 (106)
T 4amh_A 8 VPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLK 87 (106)
T ss_dssp ----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEE
T ss_pred CCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEE
Confidence 3446789999999987653 38999999999999999889999999999999999999999999999988999999
Q ss_pred EEEeccc
Q psy4897 256 VKYLREV 262 (774)
Q Consensus 256 V~R~~~~ 262 (774)
|.|....
T Consensus 88 v~R~~~~ 94 (106)
T 4amh_A 88 VAKPGSG 94 (106)
T ss_dssp EECCSSS
T ss_pred EEeCCCC
Confidence 9987643
No 183
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.23 E-value=1.8e-10 Score=132.16 Aligned_cols=184 Identities=13% Similarity=0.135 Sum_probs=110.8
Q ss_pred CcccEEEEc----------cCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCH----------HHHHHHH
Q psy4897 32 NGLGISIKG----------GKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATH----------DEAVKAL 91 (774)
Q Consensus 32 ~gLGfsI~G----------G~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh----------~eaV~lL 91 (774)
..||+++.. |.+...|++|.+|.|+|||++ + |++||+|++|||+.|.+... ......-
T Consensus 253 ~~LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~ 330 (539)
T 4fln_A 253 PCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQ 330 (539)
T ss_dssp CBCCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHT
T ss_pred eecceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHc
Confidence 457777653 223346999999999999987 4 99999999999999976543 2233344
Q ss_pred HhcCceEEEEeeecccccceeeeeeccceeeeeeecccccccccccCCCCCcccccCcCCCCCCCCCCcCCCCCCCCCcc
Q psy4897 92 KRAGKVVELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSV 171 (774)
Q Consensus 92 k~ag~~V~L~V~R~~~ks~~~~~~~~~~~~~~~~tL~~~~lsis~~~~~~~~t~~~g~l~~p~~~s~s~~~~s~~~pe~~ 171 (774)
++.|+.|+|+|.|++.. ..+ ..++.............. .|. ...
T Consensus 331 ~~~Gd~v~l~v~R~Gk~-~~v-----------~Vtl~~~~~~~~~~~~~~----------~p~--------------~~~ 374 (539)
T 4fln_A 331 KFAGDIAEIGIIRAGEH-KKV-----------QVVLRPRVHLVPYHIDGG----------QPS--------------YII 374 (539)
T ss_dssp SCTTCEEEEEEEETTEE-EEE-----------EEECBCCCCSSCSCTTSS----------CCC--------------CCC
T ss_pred CCCCCEEEEEEEECCEE-EEE-----------EEEEccCccccccccccC----------CCc--------------ccc
Confidence 56799999999998632 122 222221110000000000 000 000
Q ss_pred ccceEEEEEecc-----CCCCcceEEe-------CCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHH
Q psy4897 172 ENQKRIIRVKKS-----ENNGLGISIK-------GGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHD 239 (774)
Q Consensus 172 ~~~~r~V~L~k~-----~~~~LGfsi~-------gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~ 239 (774)
........+... ....+++.+. .......+++|+.|.++++|...| ++.||+|++|||++|.+ ..
T Consensus 375 ~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s--~~ 451 (539)
T 4fln_A 375 VAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRN--IH 451 (539)
T ss_dssp STTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCS--HH
T ss_pred ccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCC--HH
Confidence 011111112111 0111111110 011124579999999999999997 99999999999999988 89
Q ss_pred HHHHHHHHcC-cceEEEE
Q psy4897 240 EAVKALKRAG-KLVELEV 256 (774)
Q Consensus 240 e~v~~Lk~~g-~~V~L~V 256 (774)
++.++|+++. +-+.|.+
T Consensus 452 ~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 452 HLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp HHHHHHHTCCSSEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEE
Confidence 9999999854 4444443
No 184
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.23 E-value=3.9e-11 Score=107.72 Aligned_cols=92 Identities=41% Similarity=0.583 Sum_probs=79.7
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcc
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKL 251 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~ 251 (774)
....+.+.+.+. ..+|||.+.++.+ ..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++..++..++.
T Consensus 9 ~~~~~~v~l~k~-~~glG~~~~~~~~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 86 (104)
T 3i4w_A 9 PREPRRIVIHRG-STGLGFNIVGGEX-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 86 (104)
T ss_dssp CSSCEEEEEECB-TTBTSEEEEECC--CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCccEEEEEEeC-CCccCEEEECCCC-CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 345788999886 5789999988744 45899999999999999988999999999999999999999999999999999
Q ss_pred eEEEEEEecccccc
Q psy4897 252 VELEVKYLREVTPY 265 (774)
Q Consensus 252 V~L~V~R~~~~~~~ 265 (774)
+.|+|.|.++.+..
T Consensus 87 v~l~v~r~~~~~~~ 100 (104)
T 3i4w_A 87 VTIIAQYKPEEYSR 100 (104)
T ss_dssp EEEEEEECHHHHHH
T ss_pred EEEEEEECcchhhh
Confidence 99999998665443
No 185
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.22 E-value=9.9e-11 Score=103.57 Aligned_cols=87 Identities=23% Similarity=0.374 Sum_probs=76.2
Q ss_pred ceEEEEEecc-CCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 174 QKRIIRVKKS-ENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~-~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
+...+.+.+. ...+|||.+.++.+ ..+++|..|.++|||+++|.|++||+|++|||+++.+.++.+++..++..++.+
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 81 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTD-EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERV 81 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSS-SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred EEEEEEEEECCCCCcccEEEEeccC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 3567888875 45789999987644 468999999999999999889999999999999999999999999999999999
Q ss_pred EEEEEEecc
Q psy4897 253 ELEVKYLRE 261 (774)
Q Consensus 253 ~L~V~R~~~ 261 (774)
.|+|.|.+.
T Consensus 82 ~l~v~R~~~ 90 (95)
T 2vwr_A 82 NLTIARPGK 90 (95)
T ss_dssp EEEEEEESC
T ss_pred EEEEEcCCc
Confidence 999998764
No 186
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=3.2e-11 Score=111.38 Aligned_cols=88 Identities=34% Similarity=0.561 Sum_probs=77.5
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhc-cCCCCCCEEEEECCeecCCCCHHHHHHHHHHcC--
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQT-EQLYVGDAILSVNGEDLREATHDEAVKALKRAG-- 249 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~a-G~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g-- 249 (774)
...+++.+.+...++|||.+.++.+...+++|..|.+++||+++ |+|++||+|++|||++|.++++.+++.+++..+
T Consensus 14 ~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~ 93 (119)
T 2cs5_A 14 DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCER 93 (119)
T ss_dssp SCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHC
T ss_pred CCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccc
Confidence 45788999997777899999988766678999999999999999 349999999999999999999999999999864
Q ss_pred --cceEEEEEEec
Q psy4897 250 --KLVELEVKYLR 260 (774)
Q Consensus 250 --~~V~L~V~R~~ 260 (774)
..+.|+|.|..
T Consensus 94 ~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 94 HSGELMLLVRPNA 106 (119)
T ss_dssp CSSCEEEEEECCC
T ss_pred CCCEEEEEEEccc
Confidence 48999998753
No 187
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.22 E-value=6.3e-11 Score=103.78 Aligned_cols=84 Identities=23% Similarity=0.349 Sum_probs=74.9
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
++|++.+.+. ..++||.+.++.+ ..+++|..|.+++||+++| |++||+|++|||+++.+++++++.++|+..++.+.
T Consensus 4 ~~r~v~l~k~-~~g~G~~~~~~~~-~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 80 (90)
T 2he4_A 4 RPRLCHLRKG-PQGYGFNLHSDKS-RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 80 (90)
T ss_dssp CCEEEEEECB-TTBCCEEEEECSS-SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEE
T ss_pred CcEEEEEEEC-CCCccEEEEccCC-CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 5788999886 4689999987643 4589999999999999998 99999999999999999999999999998889999
Q ss_pred EEEEEec
Q psy4897 254 LEVKYLR 260 (774)
Q Consensus 254 L~V~R~~ 260 (774)
|+|.|..
T Consensus 81 l~v~r~~ 87 (90)
T 2he4_A 81 LLVVGPS 87 (90)
T ss_dssp EEEECCC
T ss_pred EEEEccC
Confidence 9998754
No 188
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=4.1e-11 Score=108.36 Aligned_cols=85 Identities=35% Similarity=0.556 Sum_probs=74.4
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCe-EEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH-----c
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPI-LISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-----A 248 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi-~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-----~ 248 (774)
.+.+.+.+ ...+|||++.++.+...++ +|..|.+++||+++|+|++||+|++|||+++.+++|++++++|+. .
T Consensus 7 ~~~v~l~k-~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~ 85 (103)
T 1ufx_A 7 GTLVRVKK-SAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKD 85 (103)
T ss_dssp SEEEEEEC-CSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSS
T ss_pred eEEEEEEc-CCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCC
Confidence 57788866 4689999999987766665 999999999999998899999999999999999999999999998 4
Q ss_pred CcceEEEEEEec
Q psy4897 249 GKLVELEVKYLR 260 (774)
Q Consensus 249 g~~V~L~V~R~~ 260 (774)
++.+.|+|.|..
T Consensus 86 ~~~i~l~v~r~~ 97 (103)
T 1ufx_A 86 RDYIDFLVTEFN 97 (103)
T ss_dssp CSEEEEEECCCC
T ss_pred CCeEEEEEEEcc
Confidence 677888887654
No 189
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.21 E-value=7.9e-11 Score=103.78 Aligned_cols=86 Identities=37% Similarity=0.554 Sum_probs=75.0
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
..+.++|.+. ..+|||++.++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus 3 ~~~~v~l~k~-~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (94)
T 2fe5_A 3 TIMEVNLLKG-PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT 81 (94)
T ss_dssp CEEEEEEECC-TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC
T ss_pred EEEEEEEEEC-CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3677888886 67899999987542 35899999999999999977999999999999999999999999999988
Q ss_pred CcceEEEEEEec
Q psy4897 249 GKLVELEVKYLR 260 (774)
Q Consensus 249 g~~V~L~V~R~~ 260 (774)
++.+.|+|.|.+
T Consensus 82 ~~~v~l~v~R~g 93 (94)
T 2fe5_A 82 SDMVYLKVAKPG 93 (94)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEcCC
Confidence 889999998753
No 190
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.21 E-value=7.5e-11 Score=104.05 Aligned_cols=84 Identities=27% Similarity=0.450 Sum_probs=74.7
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..+.+.+.+. ..+|||.+.++ +...+++|.+|.+++||+++|.|++||+|++|||+++.+.++++++++|+..++.++
T Consensus 4 ~~r~v~l~k~-~~~lG~~i~~~-~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 81 (93)
T 3o46_A 4 SVKIIRLVKN-REPLGATIKKD-EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAIT 81 (93)
T ss_dssp CCEEEEEEES-SSCCCEEEEEC-TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEE
T ss_pred cEEEEEEEeC-CCCccEEEEec-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 4678889886 46999999875 335789999999999999998899999999999999999999999999999888999
Q ss_pred EEEEEe
Q psy4897 254 LEVKYL 259 (774)
Q Consensus 254 L~V~R~ 259 (774)
|+|.+.
T Consensus 82 l~v~~~ 87 (93)
T 3o46_A 82 FKIIPG 87 (93)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 998764
No 191
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.21 E-value=1e-10 Score=103.51 Aligned_cols=87 Identities=31% Similarity=0.484 Sum_probs=76.4
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC---CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~---~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
..+.+.+.+. ..+|||++.++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..++
T Consensus 5 ~~~~v~l~k~-~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~ 83 (96)
T 1d5g_A 5 DIFEVELAKN-DNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQ 83 (96)
T ss_dssp CEEEEEEECS-SSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCS
T ss_pred CEEEEEEEeC-CCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4678888875 58999999987542 3589999999999999997799999999999999999999999999998889
Q ss_pred ceEEEEEEecc
Q psy4897 251 LVELEVKYLRE 261 (774)
Q Consensus 251 ~V~L~V~R~~~ 261 (774)
.+.|+|.|...
T Consensus 84 ~v~l~v~R~~~ 94 (96)
T 1d5g_A 84 VVHLLLEKGQS 94 (96)
T ss_dssp EEEEEEECCSC
T ss_pred eEEEEEEcCCC
Confidence 99999987543
No 192
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.21 E-value=3.8e-11 Score=112.56 Aligned_cols=87 Identities=31% Similarity=0.490 Sum_probs=74.2
Q ss_pred eEEEEEeccCCCCcceEEeCCCCC----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKEN----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-- 248 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~-- 248 (774)
...+.+.+....+|||.+.++.+. ..+++|..|.+++||+++|+|++||+|++|||+++.+++|++++++|+..
T Consensus 26 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 26 TLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp EEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred EEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 344555545678999999886532 35899999999999999988999999999999999999999999999975
Q ss_pred -----CcceEEEEEEecc
Q psy4897 249 -----GKLVELEVKYLRE 261 (774)
Q Consensus 249 -----g~~V~L~V~R~~~ 261 (774)
+..|.|+|.|...
T Consensus 106 ~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 106 MEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHTCEEEEEEEECSC
T ss_pred cccCCCCEEEEEEEeCCC
Confidence 7899999998654
No 193
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.21 E-value=1.2e-10 Score=107.52 Aligned_cols=89 Identities=27% Similarity=0.441 Sum_probs=75.8
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCC-CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcc
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKEN-KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKL 251 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~-~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~ 251 (774)
...+.+.+.+....+|||.+.++.+. ..+++|..|.+++||+++|+|++||+|++|||++|.++++.+++.+++..+..
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~ 93 (119)
T 1x6d_A 14 DGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREP 93 (119)
T ss_dssp TTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSS
T ss_pred CCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 34777888887788999999987653 46899999999999999988999999999999999999999999999986554
Q ss_pred -eEEEEEEecc
Q psy4897 252 -VELEVKYLRE 261 (774)
Q Consensus 252 -V~L~V~R~~~ 261 (774)
+.++|.|...
T Consensus 94 ~~~l~v~R~~~ 104 (119)
T 1x6d_A 94 RQAVIVTRKLT 104 (119)
T ss_dssp SEEEEEEECCC
T ss_pred eEEEEEEcCCC
Confidence 4577776554
No 194
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.21 E-value=3.6e-11 Score=119.87 Aligned_cols=72 Identities=31% Similarity=0.400 Sum_probs=67.1
Q ss_pred CCcccEEEEccCC--------CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEe
Q psy4897 31 NNGLGISIKGGKE--------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEV 102 (774)
Q Consensus 31 ~~gLGfsI~GG~e--------~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V 102 (774)
+.+|||+|.||.+ ...|++|.+|.++|||++ | |++||+|++|||++|.+++|.+++.+++.++..|.|.|
T Consensus 1 ~~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 78 (195)
T 2qbw_A 1 SPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELII 78 (195)
T ss_dssp CCCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEE
T ss_pred CCcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 4789999999874 346999999999999999 7 99999999999999999999999999999999999999
Q ss_pred ee
Q psy4897 103 GV 104 (774)
Q Consensus 103 ~R 104 (774)
.|
T Consensus 79 ~r 80 (195)
T 2qbw_A 79 VR 80 (195)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 195
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=4.5e-11 Score=110.03 Aligned_cols=83 Identities=28% Similarity=0.324 Sum_probs=73.0
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
+++.|.+.+. ..+|||++.++.+ .+++|..|.+++||+++| |++||+|++|||++|.++++.+++..++..++.|.
T Consensus 19 ~~~~v~l~~~-~~~lG~~~~~~~~--~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~ 94 (117)
T 1uit_A 19 EPRHVKVQKG-SEPLGISIVSGEK--GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDTIT 94 (117)
T ss_dssp CCEEEEEECS-SCCCCEEEEECTT--SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEE
T ss_pred CCEEEEEEeC-CCCccEEEEccCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4457787654 5899999998754 489999999999999998 99999999999999999999999988888899999
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|+.
T Consensus 95 l~v~r~~ 101 (117)
T 1uit_A 95 ILAQYNP 101 (117)
T ss_dssp EEECCCS
T ss_pred EEEEECC
Confidence 9998865
No 196
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.21 E-value=6.3e-11 Score=110.72 Aligned_cols=77 Identities=26% Similarity=0.444 Sum_probs=68.5
Q ss_pred EeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceEEEEeee
Q psy4897 27 KYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVVELEVGV 104 (774)
Q Consensus 27 ~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V~L~V~R 104 (774)
..+++.+|||++.++.+ .|++|..|.|+|||+++| |++||+|++|||++|.++++.+++.++++ .++.|.|+|.|
T Consensus 34 ~~~~~~~lG~~l~~~~~--~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 110 (124)
T 3tsv_A 34 KFRKGDSVGLRLAGGND--VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK 110 (124)
T ss_dssp EEECSSCCCEEEEECTT--SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EcCCCCceeEEEecCCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 34556899999998754 689999999999999998 99999999999999999999999998884 78899999988
Q ss_pred cc
Q psy4897 105 GY 106 (774)
Q Consensus 105 ~~ 106 (774)
+.
T Consensus 111 ~~ 112 (124)
T 3tsv_A 111 KK 112 (124)
T ss_dssp CH
T ss_pred CC
Confidence 65
No 197
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=1.2e-10 Score=108.89 Aligned_cols=86 Identities=35% Similarity=0.453 Sum_probs=74.2
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceE
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVV 98 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V 98 (774)
...+++.+...+..+|||++.++.+...+++|..|.++|||+++| |++||+|++|||++|.++++.+++..++. +..+
T Consensus 19 g~~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v 96 (128)
T 1uf1_A 19 GDEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHL 96 (128)
T ss_dssp SSEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEE
T ss_pred CcEEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeE
Confidence 355667777666689999999876666799999999999999998 99999999999999999999888887776 4689
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|+.
T Consensus 97 ~l~v~R~g 104 (128)
T 1uf1_A 97 ILTVKDVG 104 (128)
T ss_dssp EEEEECCS
T ss_pred EEEEEECC
Confidence 99998865
No 198
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.21 E-value=8.5e-11 Score=108.28 Aligned_cols=87 Identities=31% Similarity=0.565 Sum_probs=76.9
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCC------CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKEN------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 246 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~------~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk 246 (774)
.+.+.+.+.+....+|||.+.++.+. ..+++|..|.+++||+ +| |++||+|++|||++|.++++.+++.+++
T Consensus 13 ~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~ 90 (117)
T 2csj_A 13 WEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLR 90 (117)
T ss_dssp EEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 35778888887668999999987653 4679999999999996 65 9999999999999999999999999999
Q ss_pred HcCcceEEEEEEecc
Q psy4897 247 RAGKLVELEVKYLRE 261 (774)
Q Consensus 247 ~~g~~V~L~V~R~~~ 261 (774)
..++.+.|+|.|.+.
T Consensus 91 ~~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 91 KSGKIAAIVVKRPRK 105 (117)
T ss_dssp HSCSEEEEEEEEEEE
T ss_pred cCCCeEEEEEEECCc
Confidence 999999999998655
No 199
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.21 E-value=1.4e-10 Score=106.26 Aligned_cols=85 Identities=25% Similarity=0.410 Sum_probs=75.5
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCC-CCCCEEEEECCeecCCCCHHHHHHHHHHcCcc
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQL-YVGDAILSVNGEDLREATHDEAVKALKRAGKL 251 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L-~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~ 251 (774)
...+.+.+.+....+|||.+.+. ..+++|..|.+++||+++| | ++||+|++|||++|.++++++++++|+..++.
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~---~~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 99 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNE---MDSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGT 99 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEEC---SSSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEE
T ss_pred CceEEEEEEeCCCCceeEEEEeC---CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 35788999997666999999865 4689999999999999998 6 99999999999999999999999999998889
Q ss_pred eEEEEEEecc
Q psy4897 252 VELEVKYLRE 261 (774)
Q Consensus 252 V~L~V~R~~~ 261 (774)
+.|+|.|...
T Consensus 100 v~l~v~r~~~ 109 (113)
T 1va8_A 100 LTFVLIPSSG 109 (113)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEECCc
Confidence 9999987654
No 200
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.21 E-value=1.1e-10 Score=103.67 Aligned_cols=88 Identities=38% Similarity=0.576 Sum_probs=77.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCC-CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENK-MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~-~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
+.+.+.+.+. ..+|||.+.++.+.. .+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..++.+
T Consensus 4 ~~~~v~l~~~-~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (98)
T 2opg_A 4 CETTIEISKG-RTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRV 82 (98)
T ss_dssp EEEEEEEECB-TTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CEEEEEEEEC-CCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 4678888875 678999999875543 58999999999999999779999999999999999999999999999888999
Q ss_pred EEEEEEeccc
Q psy4897 253 ELEVKYLREV 262 (774)
Q Consensus 253 ~L~V~R~~~~ 262 (774)
.|+|.|.+..
T Consensus 83 ~l~v~R~~~~ 92 (98)
T 2opg_A 83 RLTLYRDEAP 92 (98)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEcCCCC
Confidence 9999886553
No 201
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.21 E-value=4.2e-11 Score=103.57 Aligned_cols=82 Identities=28% Similarity=0.446 Sum_probs=71.6
Q ss_pred EEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEE
Q psy4897 176 RIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELE 255 (774)
Q Consensus 176 r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~ 255 (774)
..+++. ...+|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++..++.+.|+
T Consensus 3 ~~v~l~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~ 79 (85)
T 1rgw_A 3 YSVTLT--GPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLT 79 (85)
T ss_dssp EEEEEC--CSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEE
T ss_pred EEEEEe--CCCccCEEEEeccCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEE
Confidence 345553 3578999999887767789999999999999997 9999999999999999999999999998888889999
Q ss_pred EEEec
Q psy4897 256 VKYLR 260 (774)
Q Consensus 256 V~R~~ 260 (774)
|.|.+
T Consensus 80 v~R~~ 84 (85)
T 1rgw_A 80 LQKSK 84 (85)
T ss_dssp EESCC
T ss_pred EEeCC
Confidence 98753
No 202
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.21 E-value=6.4e-11 Score=107.64 Aligned_cols=86 Identities=29% Similarity=0.363 Sum_probs=75.4
Q ss_pred cceEEEEEeccCCCCcceEEeCCCC----CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKE----NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~----~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
...+.+.+.+. ..+|||.+.++.+ ...+++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+..
T Consensus 14 ~~~~~v~l~k~-~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 14 PEVKIVELVKD-CKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp SSCEEEEEEEC-SSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CceEEEEEEEC-CCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 35688999886 5799999988654 346799999999999999988999999999999999999999999999994
Q ss_pred -CcceEEEEEEe
Q psy4897 249 -GKLVELEVKYL 259 (774)
Q Consensus 249 -g~~V~L~V~R~ 259 (774)
++.|.|+|.|.
T Consensus 93 ~~~~v~l~v~R~ 104 (108)
T 2d92_A 93 PPGLVHLGICSG 104 (108)
T ss_dssp CSEEEEEEEECC
T ss_pred CCCeEEEEEEcC
Confidence 67899999864
No 203
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.21 E-value=5.9e-11 Score=106.45 Aligned_cols=83 Identities=28% Similarity=0.444 Sum_probs=74.4
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEE
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVEL 254 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L 254 (774)
++.+.+.|....++|+.+.... ..+++|.+|.+++||+++|.|++||+|++|||++|.++++++++++|+..++.+.|
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~--~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L 90 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNE--KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISL 90 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECT--TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEE
T ss_pred cEEEEEEeCCCCCeeEEEEeCC--CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 6889999988889999998642 35899999999999999988999999999999999998999999999998888999
Q ss_pred EEEEe
Q psy4897 255 EVKYL 259 (774)
Q Consensus 255 ~V~R~ 259 (774)
+|.+.
T Consensus 91 ~V~~~ 95 (97)
T 2ejy_A 91 KVIPN 95 (97)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 88753
No 204
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.21 E-value=4.1e-11 Score=112.16 Aligned_cols=88 Identities=25% Similarity=0.402 Sum_probs=77.7
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCC---CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecC-CCCHHHHHHHHHHc
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLR-EATHDEAVKALKRA 248 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~---~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~-~~t~~e~v~~Lk~~ 248 (774)
...+.|.+.+....+|||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||++|. ++++++++.+|+..
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 103 (128)
T 2db5_A 24 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT 103 (128)
T ss_dssp CEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred CceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 35778889887668999999876543 248999999999999999889999999999999997 99999999999999
Q ss_pred CcceEEEEEEec
Q psy4897 249 GKLVELEVKYLR 260 (774)
Q Consensus 249 g~~V~L~V~R~~ 260 (774)
+..|.|+|.|..
T Consensus 104 ~~~v~l~v~r~~ 115 (128)
T 2db5_A 104 TGSLRLIVAREP 115 (128)
T ss_dssp CSEEEEEEEECC
T ss_pred CCeEEEEEEcCC
Confidence 999999998864
No 205
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.20 E-value=4.9e-11 Score=103.93 Aligned_cols=83 Identities=25% Similarity=0.409 Sum_probs=73.0
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEE
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVEL 254 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L 254 (774)
...+.+. ...+|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++..++.+.|
T Consensus 4 ~~~v~l~--~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 80 (88)
T 2uzc_A 4 NYSVSLV--GPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNM 80 (88)
T ss_dssp EEEEEEE--SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEE
T ss_pred EEEEEEc--CCCcccEEEECcCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 4456662 4578999999877666789999999999999998 999999999999999999999999999988899999
Q ss_pred EEEEec
Q psy4897 255 EVKYLR 260 (774)
Q Consensus 255 ~V~R~~ 260 (774)
+|.|.+
T Consensus 81 ~v~R~g 86 (88)
T 2uzc_A 81 TLQRES 86 (88)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 998754
No 206
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.20 E-value=5.5e-11 Score=108.91 Aligned_cols=81 Identities=25% Similarity=0.254 Sum_probs=70.5
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce-E
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV-V 98 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~-V 98 (774)
..++|.+.+ ++.+|||.+.+. .+++|..|.|+|||+++| |++||+|++|||++|.++++.+++.+++..+.. |
T Consensus 23 ~~r~v~l~k-~~~~~G~~l~~~----~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v 96 (109)
T 2vsv_A 23 MPRSIRFTA-EEGDLGFTLRGN----APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEI 96 (109)
T ss_dssp SCEEEEECC-GGGCCCEEEESS----SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCE
T ss_pred CCEEEEEEe-CCCceeEEEeCC----CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeE
Confidence 456778855 679999999753 468999999999999998 999999999999999999999999999987664 9
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|..
T Consensus 97 ~l~V~~~~ 104 (109)
T 2vsv_A 97 EMKVVSLL 104 (109)
T ss_dssp EEEEESCC
T ss_pred EEEEEECC
Confidence 99998754
No 207
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.20 E-value=9.9e-11 Score=104.16 Aligned_cols=83 Identities=23% Similarity=0.270 Sum_probs=69.6
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcC-ceEE
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG-KVVE 99 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag-~~V~ 99 (774)
.+.+.+. ++..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++... ..+.
T Consensus 10 ~~~~~l~-~~~~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 86 (98)
T 2jxo_A 10 PRLCTMK-KGPSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (98)
T ss_dssp CEEEEEE-CTTTCCCEEEECCCS-SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred cEEEEEE-eCCCcccEEEEecCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 3455654 456799999997753 3489999999999999998 9999999999999999999999999999864 4566
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|+.
T Consensus 87 l~v~R~g 93 (98)
T 2jxo_A 87 LVVDRET 93 (98)
T ss_dssp EECCHHH
T ss_pred EEEECCc
Confidence 8887764
No 208
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=2.7e-11 Score=111.79 Aligned_cols=93 Identities=15% Similarity=0.139 Sum_probs=78.2
Q ss_pred ccccccCCCCcEEEEEEeecCC--cccEEEEccCCCC-CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHH
Q psy4897 11 TEAFFFSSRDFYSENYKYTENN--GLGISIKGGKENK-MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEA 87 (774)
Q Consensus 11 ~~~~~~~s~~~~~V~l~rk~~~--gLGfsI~GG~e~~-~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~ea 87 (774)
-+.+......++.+.+.+.+.. +|||+|.+..+.+ .+++|..|.++|||+++| |++||+|++|||++|.++++.++
T Consensus 6 ~~~~e~~~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~ 84 (114)
T 2d8i_A 6 SGEIEICPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSML 84 (114)
T ss_dssp CCCCCSSCCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHH
T ss_pred ccceEeccCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHH
Confidence 3445566778889999888774 7999999754433 589999999999999998 99999999999999999999999
Q ss_pred HHHHHhcCceEEEEeeecc
Q psy4897 88 VKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 88 V~lLk~ag~~V~L~V~R~~ 106 (774)
+.+++. ..+.|+|.|..
T Consensus 85 ~~~l~~--~~v~l~v~R~p 101 (114)
T 2d8i_A 85 KDFLSQ--PSLGLLVRTYP 101 (114)
T ss_dssp HHHHTS--SEEEEEEEECC
T ss_pred HHHHhC--CcEEEEEEECC
Confidence 988875 48899998754
No 209
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.20 E-value=8.5e-11 Score=107.60 Aligned_cols=87 Identities=25% Similarity=0.527 Sum_probs=77.0
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
+.+.+.+.+. ..+|||.+.++.+...+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++..++.+.
T Consensus 24 ~~~~v~l~~~-~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~ 102 (112)
T 2r4h_A 24 DFYTVELERG-AKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRVR 102 (112)
T ss_dssp CEEEEEEECB-TTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred ceEEEEEEcC-CCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4677888775 467999999876656799999999999999997799999999999999999999999999998889999
Q ss_pred EEEEEecc
Q psy4897 254 LEVKYLRE 261 (774)
Q Consensus 254 L~V~R~~~ 261 (774)
|+|.|.+.
T Consensus 103 l~v~R~~~ 110 (112)
T 2r4h_A 103 LFLKRGET 110 (112)
T ss_dssp EEEECCEE
T ss_pred EEEEeCCc
Confidence 99987643
No 210
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=9.9e-12 Score=110.72 Aligned_cols=80 Identities=21% Similarity=0.313 Sum_probs=70.8
Q ss_pred cEEEEEEeecC-CcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 21 FYSENYKYTEN-NGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 21 ~~~V~l~rk~~-~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
.++|++.+.+. .+|||.|.+ ..+++|..|.++|||+ +| |++||+|++|||++|.++++.+++.+++.+++.|.
T Consensus 9 ~~~v~l~~~~~~~~~G~~l~~----~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~ 82 (96)
T 2edv_A 9 RHTVKIDKDTLLQDYGFHISE----SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAEDSLS 82 (96)
T ss_dssp EEEEEECCCSSSCSCSBCCCS----SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEE
T ss_pred cEEEEEEECCCCCcccEEEec----CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 46778877665 489999976 4589999999999996 55 99999999999999999999999999999999999
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|+.
T Consensus 83 l~v~R~~ 89 (96)
T 2edv_A 83 ITVVRCT 89 (96)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999865
No 211
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.19 E-value=1.1e-10 Score=100.95 Aligned_cols=81 Identities=28% Similarity=0.414 Sum_probs=70.6
Q ss_pred EEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--CcceEE
Q psy4897 177 IIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GKLVEL 254 (774)
Q Consensus 177 ~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~--g~~V~L 254 (774)
.+++.+. ..+|||.+.++.+...+++|..|.+++||+++|.|++||+|++|||+++.+++++++.++|+.. ++.+.|
T Consensus 3 ~v~l~k~-~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 81 (85)
T 2i04_A 3 HTKLRKS-SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDL 81 (85)
T ss_dssp EEEEECB-TTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEE
T ss_pred EEEEEEC-CCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEE
Confidence 4566664 5789999998766667899999999999999977999999999999999999999999999985 788888
Q ss_pred EEEE
Q psy4897 255 EVKY 258 (774)
Q Consensus 255 ~V~R 258 (774)
+|.|
T Consensus 82 ~v~R 85 (85)
T 2i04_A 82 ELCR 85 (85)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8864
No 212
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=8.9e-11 Score=105.97 Aligned_cols=87 Identities=38% Similarity=0.560 Sum_probs=76.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC------CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 247 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~------~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~ 247 (774)
+...+.+.+. ..+|||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++.
T Consensus 7 ~~~~v~l~~~-~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 85 (105)
T 1wha_A 7 GRHVACLARS-ERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA 85 (105)
T ss_dssp EEEEEEECCC-TTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS
T ss_pred eeEEEEEEeC-CCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4566777775 56799999987652 4689999999999999998899999999999999999999999999998
Q ss_pred cCcceEEEEEEecc
Q psy4897 248 AGKLVELEVKYLRE 261 (774)
Q Consensus 248 ~g~~V~L~V~R~~~ 261 (774)
.++.+.|+|.|..+
T Consensus 86 ~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 86 ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEEEEECCC
T ss_pred CCCeEEEEEEECCC
Confidence 88999999998754
No 213
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1.4e-10 Score=103.80 Aligned_cols=87 Identities=34% Similarity=0.510 Sum_probs=76.9
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..+.+.+.+.....|||.+.+..+...+++|..|.+++||+++| |++||+|++|||+++.+.++.+++..++. ++.+.
T Consensus 10 ~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~ 87 (100)
T 2eeh_A 10 IIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLH 87 (100)
T ss_dssp EECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEE
T ss_pred eEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEE
Confidence 46778888877778999999876556789999999999999998 99999999999999999999999999887 78999
Q ss_pred EEEEEeccc
Q psy4897 254 LEVKYLREV 262 (774)
Q Consensus 254 L~V~R~~~~ 262 (774)
|+|.|.++.
T Consensus 88 l~v~R~g~~ 96 (100)
T 2eeh_A 88 MMVRRMGSG 96 (100)
T ss_dssp EEEEECSCC
T ss_pred EEEEECCcC
Confidence 999987653
No 214
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.19 E-value=9.1e-11 Score=102.95 Aligned_cols=84 Identities=27% Similarity=0.421 Sum_probs=73.5
Q ss_pred EEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEE
Q psy4897 176 RIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELE 255 (774)
Q Consensus 176 r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~ 255 (774)
+.+.+. ...++||.+.++.+...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..++.+.|+
T Consensus 5 ~~v~~~--~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 81 (91)
T 2pkt_A 5 QQIDLQ--GPGPWGFRLVGGKDFEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLT 81 (91)
T ss_dssp EEEEEE--SSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred EEEEEC--CCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 344444 3578999999876656789999999999999998 9999999999999999999999999999988999999
Q ss_pred EEEeccc
Q psy4897 256 VKYLREV 262 (774)
Q Consensus 256 V~R~~~~ 262 (774)
|.|.++.
T Consensus 82 v~R~g~~ 88 (91)
T 2pkt_A 82 VARSEHE 88 (91)
T ss_dssp EEEECCC
T ss_pred EEECCcc
Confidence 9987653
No 215
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.19 E-value=1.1e-10 Score=103.65 Aligned_cols=87 Identities=32% Similarity=0.510 Sum_probs=75.9
Q ss_pred eEEEEEeccCCCCcceEEeCCCCC----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKEN----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
...+.+.+ ...+|||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.+++++++..+|+..++
T Consensus 4 ~~~v~l~k-~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 82 (97)
T 2jil_A 4 TVEVTLHK-EGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQ 82 (97)
T ss_dssp EEEEEEEC-BTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCS
T ss_pred EEEEEEEe-CCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45677776 467999999886532 4689999999999999997799999999999999999999999999999899
Q ss_pred ceEEEEEEeccc
Q psy4897 251 LVELEVKYLREV 262 (774)
Q Consensus 251 ~V~L~V~R~~~~ 262 (774)
.+.|+|.|....
T Consensus 83 ~v~l~v~R~~~~ 94 (97)
T 2jil_A 83 EAALLIEYDVSE 94 (97)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEeCCCc
Confidence 999999987653
No 216
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.19 E-value=1.8e-10 Score=101.01 Aligned_cols=84 Identities=18% Similarity=0.200 Sum_probs=73.6
Q ss_pred ceEEEEEeccCC-CCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 174 QKRIIRVKKSEN-NGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~-~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
+.+.+++.+... .+|||.+.++.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..++.+
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~-~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 83 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLL-EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKL 83 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTT-SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEE
T ss_pred ceEEEEEEECCCCCCccEEEEeccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 467788887654 589999987643 3689999999999999998 9999999999999999999999999999888999
Q ss_pred EEEEEEe
Q psy4897 253 ELEVKYL 259 (774)
Q Consensus 253 ~L~V~R~ 259 (774)
.|+|.|.
T Consensus 84 ~l~v~R~ 90 (91)
T 1m5z_A 84 DLVISRN 90 (91)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999874
No 217
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=2.2e-10 Score=104.16 Aligned_cols=90 Identities=37% Similarity=0.549 Sum_probs=77.8
Q ss_pred ccccceEEEEEeccCCCCcceEEeCCCC------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHH
Q psy4897 170 SVENQKRIIRVKKSENNGLGISIKGGKE------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVK 243 (774)
Q Consensus 170 ~~~~~~r~V~L~k~~~~~LGfsi~gg~~------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~ 243 (774)
....+...+.+.+. ..+|||.+.++.+ ...+++|..|.+++||+++| |++||+|++|||+++.+.++.+++.
T Consensus 11 ~~~~~~~~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~ 88 (110)
T 1x5q_A 11 RIEEEELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVE 88 (110)
T ss_dssp CCCCEEEEEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHH
T ss_pred cCCcceEEEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHH
Confidence 34445677777775 7899999987654 35789999999999999998 9999999999999999999999999
Q ss_pred HHHHcCcceEEEEEEecc
Q psy4897 244 ALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 244 ~Lk~~g~~V~L~V~R~~~ 261 (774)
.++..++.+.|+|.|.++
T Consensus 89 ~~~~~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 89 ALRGAGTAVQMRVWRESG 106 (110)
T ss_dssp HHHSCCSEEEEEEEECSS
T ss_pred HhhCCCCeEEEEEEECCc
Confidence 888889999999998765
No 218
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.19 E-value=1.6e-10 Score=104.94 Aligned_cols=87 Identities=20% Similarity=0.441 Sum_probs=76.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC------------CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN------------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEA 241 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~------------~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~ 241 (774)
+.+.+.+.+....+|||.+.++... ..+++|..|.+++||+++| |++||+|++|||++|.++++.++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 4678888877788999999987542 1268999999999999998 99999999999999999999999
Q ss_pred HHHHHHcCcceEEEEEEecc
Q psy4897 242 VKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 242 v~~Lk~~g~~V~L~V~R~~~ 261 (774)
+++++..++.+.|+|.|...
T Consensus 86 ~~~l~~~~~~v~l~v~~~~~ 105 (109)
T 1q3o_A 86 VNMIRQGGNTLMVKVVMVTR 105 (109)
T ss_dssp HHHHHHTTTEEEEEEEEEEC
T ss_pred HHHHHhCCCEEEEEEEECCC
Confidence 99999888899999987643
No 219
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.18 E-value=5.9e-11 Score=106.39 Aligned_cols=81 Identities=16% Similarity=0.185 Sum_probs=69.6
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
..+.+.+. +...+|||.+.+. .+++|..|.+++||+++| |++||+|++|||++|.++++.+++.+++..+..|.
T Consensus 15 ~~~~v~l~-~~~~g~G~~~~~~----~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 88 (100)
T 1whd_A 15 EKLQITIR-RGKDGFGFTICCD----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEII 88 (100)
T ss_dssp EEEEEEEE-CCSSSSSCBCCCS----SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEE
T ss_pred ceEEEEEE-CCCCeeeEEEeCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 34445554 4457899998764 579999999999999998 99999999999999999999999999999888899
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|..
T Consensus 89 l~v~R~~ 95 (100)
T 1whd_A 89 LLVWRVS 95 (100)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9998864
No 220
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=1.1e-10 Score=104.97 Aligned_cols=87 Identities=24% Similarity=0.482 Sum_probs=76.5
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC--CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN--KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKL 251 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~--~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~ 251 (774)
..+.+.+.+. ..+|||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++..++.
T Consensus 11 ~~~~v~l~~~-~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 89 (104)
T 2djt_A 11 GHFSVELVRG-YAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQ 89 (104)
T ss_dssp CCEEEEEECC-SSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSE
T ss_pred ceEEEEEEeC-CCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4678888875 47899999986543 56899999999999999977999999999999999999999999999988899
Q ss_pred eEEEEEEecc
Q psy4897 252 VELEVKYLRE 261 (774)
Q Consensus 252 V~L~V~R~~~ 261 (774)
+.|+|.|.++
T Consensus 90 v~l~v~R~g~ 99 (104)
T 2djt_A 90 LHLVIRRPLS 99 (104)
T ss_dssp EEEEECCCCC
T ss_pred EEEEEEECCC
Confidence 9999987654
No 221
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=1.2e-11 Score=115.78 Aligned_cols=87 Identities=23% Similarity=0.296 Sum_probs=73.6
Q ss_pred CCCcEEEEEEeecCCcccEEEEccC----------------------------CCCCCeEEEEecCCCHHhhhCCCCCCC
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGK----------------------------ENKMPILISKIFKGMAADQTEQLYVGD 69 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~----------------------------e~~~gi~Vs~V~pGSpAaraG~LqvGD 69 (774)
....++|+|.| ...+|||+|.+.. +...+++|..|.+++||+++| |++||
T Consensus 6 ~~~~r~v~l~r-~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD 83 (126)
T 2yuy_A 6 SGGPKTVTLKR-TSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGD 83 (126)
T ss_dssp SSSCCCEEEEC-CSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSC
T ss_pred CCCCEEEEEEE-CCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCC
Confidence 34556788865 4578999998511 112569999999999999998 99999
Q ss_pred EEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecc
Q psy4897 70 AILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 70 ~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
+|++|||++|.++++.+++.+++..++.|.|+|.|..
T Consensus 84 ~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 84 RIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKD 120 (126)
T ss_dssp CCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 9999999999999999999999999999999998864
No 222
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.18 E-value=3.4e-11 Score=105.79 Aligned_cols=85 Identities=27% Similarity=0.371 Sum_probs=72.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
++|++.+.+.. .+|||.+.+... ..+++|..|.++|||+++| |++||+|++|||+++.+++++++.++|+..++.+.
T Consensus 3 ~pr~v~l~k~~-~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2vsp_A 3 KPKLCRLAKGE-NGYGFHLNAIRG-LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVT 79 (91)
T ss_dssp CEEEEEEECBT-TBTSCCCBCCTT-CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEE
T ss_pred CcEEEEEEeCC-CcccEEEEeccC-CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 57899999864 589999976533 4578999999999999998 99999999999999998889999999998889999
Q ss_pred EEEEEecc
Q psy4897 254 LEVKYLRE 261 (774)
Q Consensus 254 L~V~R~~~ 261 (774)
|+|.|...
T Consensus 80 l~v~r~~~ 87 (91)
T 2vsp_A 80 LLVCGKKA 87 (91)
T ss_dssp EEEEC---
T ss_pred EEEEeCCc
Confidence 99988654
No 223
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=1.4e-10 Score=106.34 Aligned_cols=88 Identities=34% Similarity=0.514 Sum_probs=76.6
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCC-------CCCeEEEEecCCChhhh-ccCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKEN-------KMPILISKIFKGMAADQ-TEQLYVGDAILSVNGEDLREATHDEAVKA 244 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~-------~~pi~Is~V~pgspA~~-aG~L~~GD~IlaVNG~~V~~~t~~e~v~~ 244 (774)
.+.+.|.+.+....+|||.+.++.+. ..+++|..|.+++||++ +| |++||+|++|||+++.++++++++++
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35788889887788999999875432 23789999999999999 76 99999999999999999999999999
Q ss_pred HHHcCcceEEEEEEecc
Q psy4897 245 LKRAGKLVELEVKYLRE 261 (774)
Q Consensus 245 Lk~~g~~V~L~V~R~~~ 261 (774)
|+..+..+.|+|.|...
T Consensus 88 l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 88 IKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHHTTTEEEEEECCCSC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 99988999999987654
No 224
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.18 E-value=4.4e-11 Score=110.01 Aligned_cols=88 Identities=27% Similarity=0.445 Sum_probs=78.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCC---CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecC-CCCHHHHHHHHHHcC
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKE---NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLR-EATHDEAVKALKRAG 249 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~---~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~-~~t~~e~v~~Lk~~g 249 (774)
..+.+.+.+....+|||.+.++.. ...+++|..|.+++||+++|.|++||+|++|||+++. ++++.+++.+++..+
T Consensus 20 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~ 99 (117)
T 2o2t_A 20 HVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAK 99 (117)
T ss_dssp CEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCC
T ss_pred eEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCC
Confidence 578899998777899999987642 2358999999999999999889999999999999998 889999999999999
Q ss_pred cceEEEEEEecc
Q psy4897 250 KLVELEVKYLRE 261 (774)
Q Consensus 250 ~~V~L~V~R~~~ 261 (774)
+.+.|+|.|.+.
T Consensus 100 ~~v~l~v~R~~~ 111 (117)
T 2o2t_A 100 DTVQLVIARGSL 111 (117)
T ss_dssp SEEEEEEESSCC
T ss_pred CEEEEEEEeCCc
Confidence 999999998654
No 225
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.18 E-value=1.5e-10 Score=108.42 Aligned_cols=90 Identities=22% Similarity=0.377 Sum_probs=79.0
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCC-----CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKE-----NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 246 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~-----~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk 246 (774)
..+.+.+.+.+....+|||.+.++.+ ...+++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 92 (129)
T 2dmz_A 13 LFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLR 92 (129)
T ss_dssp CEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHH
T ss_pred CCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 44577888877678899999987543 2458999999999999999889999999999999999999999999999
Q ss_pred HcCcceEEEEEEecc
Q psy4897 247 RAGKLVELEVKYLRE 261 (774)
Q Consensus 247 ~~g~~V~L~V~R~~~ 261 (774)
..+..+.|+|.|.+.
T Consensus 93 ~~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 93 NAGQVVHLTLVRRKT 107 (129)
T ss_dssp HCCSSEEEEEEEESS
T ss_pred cCCCeEEEEEEeCCc
Confidence 988999999998765
No 226
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.17 E-value=2.2e-10 Score=103.68 Aligned_cols=89 Identities=22% Similarity=0.327 Sum_probs=76.3
Q ss_pred cceEEEEEe-ccCCCCcceEEeCCCCC-----CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy4897 173 NQKRIIRVK-KSENNGLGISIKGGKEN-----KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 246 (774)
Q Consensus 173 ~~~r~V~L~-k~~~~~LGfsi~gg~~~-----~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk 246 (774)
.+...+.+. +....+|||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++
T Consensus 11 ~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (108)
T 2jre_A 11 FSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLR 90 (108)
T ss_dssp CEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHH
T ss_pred cEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 346667775 35678999999886542 358999999999999999879999999999999999999999999999
Q ss_pred HcCcceEEEEEEecc
Q psy4897 247 RAGKLVELEVKYLRE 261 (774)
Q Consensus 247 ~~g~~V~L~V~R~~~ 261 (774)
..+..+.|+|.|.+.
T Consensus 91 ~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 91 NAGNPVRLLLIRRLP 105 (108)
T ss_dssp HHCSEEEEEEEECCC
T ss_pred cCCCeEEEEEEeCCc
Confidence 888999999988654
No 227
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.17 E-value=1.8e-10 Score=107.31 Aligned_cols=89 Identities=28% Similarity=0.439 Sum_probs=78.9
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCC-CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcc
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKEN-KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKL 251 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~-~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~ 251 (774)
.+.+.+.+.+. ..+|||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++..+..
T Consensus 24 ~~~~~v~l~k~-~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~ 102 (124)
T 2daz_A 24 GELHIIELEKD-KNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSK 102 (124)
T ss_dssp SEEEEEEEECC-SSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSE
T ss_pred CceEEEEEEeC-CCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45678888886 67999999987553 46899999999999999988999999999999999999999999999998889
Q ss_pred eEEEEEEeccc
Q psy4897 252 VELEVKYLREV 262 (774)
Q Consensus 252 V~L~V~R~~~~ 262 (774)
+.|+|.|....
T Consensus 103 v~l~v~R~~~~ 113 (124)
T 2daz_A 103 VKLVFIRNEDA 113 (124)
T ss_dssp EEEEEEECTTH
T ss_pred EEEEEEeCCCc
Confidence 99999987654
No 228
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.17 E-value=3.1e-10 Score=103.33 Aligned_cols=86 Identities=26% Similarity=0.439 Sum_probs=75.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..+.+.+.+. ..+|||.+.++. ..+++|..|.+++||+++|+|++||+|++|||+++.++++++++.+++..++.+.
T Consensus 15 ~~~~v~l~~~-~~~lG~~l~~~~--~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 91 (111)
T 2dlu_A 15 HVEEVELIND-GSGLGFGIVGGK--TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVR 91 (111)
T ss_dssp EEEEEEEECC-SSCCCEEEECCS--SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEE
T ss_pred ceEEEEEEeC-CCccCEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 4678888875 578999998763 3589999999999999997799999999999999999999999999998889999
Q ss_pred EEEEEeccc
Q psy4897 254 LEVKYLREV 262 (774)
Q Consensus 254 L~V~R~~~~ 262 (774)
|+|.|....
T Consensus 92 l~v~R~~~~ 100 (111)
T 2dlu_A 92 MLVARDPAG 100 (111)
T ss_dssp EEEEESCTT
T ss_pred EEEEeCCCC
Confidence 999886543
No 229
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.16 E-value=1e-10 Score=105.64 Aligned_cols=87 Identities=25% Similarity=0.332 Sum_probs=77.2
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEE
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVEL 254 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L 254 (774)
+|.+.+.+.....+||.+..+.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..++.+.|
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l 79 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTL 79 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTT-CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeC-CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEE
Confidence 57888988877899999987643 4578999999999999998 999999999999999999999999999998999999
Q ss_pred EEEEecccc
Q psy4897 255 EVKYLREVT 263 (774)
Q Consensus 255 ~V~R~~~~~ 263 (774)
+|.|.....
T Consensus 80 ~v~r~~~~~ 88 (106)
T 3ngh_A 80 LVLDGDSYE 88 (106)
T ss_dssp EEECHHHHH
T ss_pred EEEECCeee
Confidence 999866543
No 230
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=2.6e-11 Score=110.67 Aligned_cols=86 Identities=35% Similarity=0.409 Sum_probs=76.0
Q ss_pred eEEEEEeccCCCCcceEEeCCCC---------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKE---------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 245 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~---------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~L 245 (774)
.+.+.+.+....+|||.+.++.+ ...+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.++
T Consensus 10 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 89 (111)
T 1uju_A 10 LRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLL 89 (111)
T ss_dssp SSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHH
T ss_pred cEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 56678888767899999998763 246899999999999999988999999999999999999999999999
Q ss_pred HHcCcceEEEEEEec
Q psy4897 246 KRAGKLVELEVKYLR 260 (774)
Q Consensus 246 k~~g~~V~L~V~R~~ 260 (774)
+..++.+.|+|.|..
T Consensus 90 ~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 90 RSVGDTLTVLVCDGF 104 (111)
T ss_dssp SSCSSEEEECCCCCC
T ss_pred HcCCCeEEEEEEECC
Confidence 988899999987653
No 231
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.16 E-value=2.1e-10 Score=103.66 Aligned_cols=86 Identities=30% Similarity=0.473 Sum_probs=74.0
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCC------------CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENK------------MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEA 241 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~------------~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~ 241 (774)
.++.+.+.+. ..+|||++.++.+.. ..++|..|.+++||+++| |++||+|++|||+++.+++++++
T Consensus 6 ~~r~v~l~k~-~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 6 SPRVVRIVKS-ESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp CCEEEEEECB-TTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEEC-CCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 5788999886 458999998874322 224699999999999998 99999999999999999999999
Q ss_pred HHHHHHcCcceEEEEEEecc
Q psy4897 242 VKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 242 v~~Lk~~g~~V~L~V~R~~~ 261 (774)
+.+|+..++.+.|+|.|...
T Consensus 84 ~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 84 VDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHcCCCEEEEEEEcCCC
Confidence 99999989999999987644
No 232
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=9.7e-11 Score=103.60 Aligned_cols=84 Identities=26% Similarity=0.378 Sum_probs=74.4
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEE
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVEL 254 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L 254 (774)
++.+.+.. ..+|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..++.+.|
T Consensus 9 ~~~v~l~~--~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 85 (94)
T 2eeg_A 9 PHSVTLRG--PSPWGFRLVGGRDFSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTL 85 (94)
T ss_dssp CEEEEECC--SSCCSCCEECCTTTTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEE
T ss_pred eEEEEEeC--CCccCEEEECccCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 56667743 468999999987777889999999999999998 999999999999999999999999999988889999
Q ss_pred EEEEecc
Q psy4897 255 EVKYLRE 261 (774)
Q Consensus 255 ~V~R~~~ 261 (774)
+|.|...
T Consensus 86 ~v~R~g~ 92 (94)
T 2eeg_A 86 SVSSGPS 92 (94)
T ss_dssp EEECCSS
T ss_pred EEEeCCC
Confidence 9987653
No 233
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.16 E-value=1.2e-10 Score=102.71 Aligned_cols=85 Identities=28% Similarity=0.458 Sum_probs=72.9
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
++|.+.+.+. ..++||.+.++.. ..+++|..|.+++||+++| |++||+|++|||+++.++++++++.+|+..++.+.
T Consensus 5 ~~r~v~l~~~-~~~~G~~l~~~~~-~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 81 (95)
T 3r68_A 5 QPRVVVIKKG-SNGYGFYLRAGPE-QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTT 81 (95)
T ss_dssp CCEEEEEECB-TTBCSCEEEEC---CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred CcEEEEEecC-CCcccEEEEecCC-CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 4688888884 6789999987543 2489999999999999998 99999999999999999999999999999888888
Q ss_pred EEEEEecc
Q psy4897 254 LEVKYLRE 261 (774)
Q Consensus 254 L~V~R~~~ 261 (774)
+++.|...
T Consensus 82 ~~~~r~~~ 89 (95)
T 3r68_A 82 LLVLDKEL 89 (95)
T ss_dssp EEEEECC-
T ss_pred EEEECCcc
Confidence 88876543
No 234
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.16 E-value=1.6e-10 Score=103.05 Aligned_cols=82 Identities=17% Similarity=0.182 Sum_probs=66.4
Q ss_pred CcEEEEEEeecC--CcccEEEEccCCC-CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 20 DFYSENYKYTEN--NGLGISIKGGKEN-KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 20 ~~~~V~l~rk~~--~gLGfsI~GG~e~-~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
..+.+.+.|.+. .+|||+|.++.+. ..+++|..|.++|||+++| |++||+|++|||++|.++++.++..++++ .
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~--~ 82 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ--P 82 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS--S
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--C
Confidence 456677777664 4899999985443 3589999999999999998 99999999999999999999999999985 5
Q ss_pred eEEEEeee
Q psy4897 97 VVELEVGV 104 (774)
Q Consensus 97 ~V~L~V~R 104 (774)
.++|+|..
T Consensus 83 ~l~ltV~~ 90 (94)
T 3kzd_A 83 SLGLLVRT 90 (94)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 67777753
No 235
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.16 E-value=1.5e-10 Score=108.68 Aligned_cols=89 Identities=26% Similarity=0.351 Sum_probs=77.4
Q ss_pred cccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--
Q psy4897 171 VENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-- 248 (774)
Q Consensus 171 ~~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~-- 248 (774)
...+...+.+.+. ..+|||.+.++.+...+++|..|.+++||+++|.|++||+|++|||++|.++++.+++++|+..
T Consensus 15 ~~g~~~~v~l~~~-~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~ 93 (129)
T 2kpk_A 15 LKGKFIHTKLRKS-SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPI 93 (129)
T ss_dssp SCSEEEEEEEEEC-SSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred cCCcEEEEEEEEC-CCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4445667788874 6789999998765566799999999999999988999999999999999999999999999985
Q ss_pred CcceEEEEEEec
Q psy4897 249 GKLVELEVKYLR 260 (774)
Q Consensus 249 g~~V~L~V~R~~ 260 (774)
++.|.|+|.|..
T Consensus 94 g~~v~l~v~R~~ 105 (129)
T 2kpk_A 94 GASVDLELCRGY 105 (129)
T ss_dssp TEEEEEEEEECS
T ss_pred CCeEEEEEEeCC
Confidence 788999999864
No 236
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.16 E-value=2.4e-10 Score=100.11 Aligned_cols=82 Identities=30% Similarity=0.468 Sum_probs=70.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
++|++.+.+. ..+|||.+.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 3 ~~r~v~l~r~-~~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 79 (91)
T 1g9o_A 3 LPRLCCLEKG-PNGYGFHLHGEKG-KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVR 79 (91)
T ss_dssp CCEEEEEECB-TTBCCEEEEECTT-CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ccEEEEEEeC-CCcccEEEEecCC-CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 4788999886 4689999987643 4689999999999999998 99999999999999999999999999998766666
Q ss_pred EEEEE
Q psy4897 254 LEVKY 258 (774)
Q Consensus 254 L~V~R 258 (774)
+++.+
T Consensus 80 ~~~~~ 84 (91)
T 1g9o_A 80 LLVVD 84 (91)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 65554
No 237
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=2.1e-10 Score=100.78 Aligned_cols=82 Identities=18% Similarity=0.258 Sum_probs=71.9
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..|++.+.+. ..++||.+.+. .+++|..|.+++||+++| |++||+|++|||+++.++++.++.++++..++.+.
T Consensus 3 ~~r~v~l~~~-~~g~G~~l~~~----~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 76 (91)
T 2f5y_A 3 RYRQITIPRG-KDGFGFTICCD----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEII 76 (91)
T ss_dssp EEEEEEEECB-TTBTSEEEECS----SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ceEEEEEEeC-CCCccEEEecC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4678888875 57799999763 469999999999999998 99999999999999999999999999998888899
Q ss_pred EEEEEecc
Q psy4897 254 LEVKYLRE 261 (774)
Q Consensus 254 L~V~R~~~ 261 (774)
|+|.|...
T Consensus 77 l~v~R~~~ 84 (91)
T 2f5y_A 77 LLVWRMVP 84 (91)
T ss_dssp EEEEECC-
T ss_pred EEEEeCCC
Confidence 99988643
No 238
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.15 E-value=2.5e-10 Score=103.17 Aligned_cols=88 Identities=27% Similarity=0.515 Sum_probs=76.8
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCCC------CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKEN------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 245 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~~------~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~L 245 (774)
..+.+.+.+.+....+|||.+.++.+. ..+++|..|.+++||+ +| |++||+|++|||+++.++++.+.+..+
T Consensus 5 ~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~ 82 (107)
T 2h2b_A 5 IWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQL 82 (107)
T ss_dssp CEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHh
Confidence 345788999997778999999987552 4589999999999999 76 999999999999999999998888888
Q ss_pred HHcCcceEEEEEEecc
Q psy4897 246 KRAGKLVELEVKYLRE 261 (774)
Q Consensus 246 k~~g~~V~L~V~R~~~ 261 (774)
+..++.+.|+|.|.+.
T Consensus 83 ~~~g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 83 RKSGKNAKITIRRKKG 98 (107)
T ss_dssp HTCCSEEEEEEEEESC
T ss_pred hCCCCEEEEEEEECCC
Confidence 8888999999998764
No 239
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.15 E-value=1.9e-10 Score=113.87 Aligned_cols=84 Identities=38% Similarity=0.514 Sum_probs=72.9
Q ss_pred EEEEEEeecCCcccEEEEccCCCC-----CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc
Q psy4897 22 YSENYKYTENNGLGISIKGGKENK-----MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 96 (774)
Q Consensus 22 ~~V~l~rk~~~gLGfsI~GG~e~~-----~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~ 96 (774)
.++.+.+ ...+|||++.++.+.. .|++|..|.|+|||+++|+|++||+|++|||++|.++++.+++.+++++++
T Consensus 102 ~~v~l~~-~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 180 (196)
T 3gsl_A 102 MEIKLIK-GPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYD 180 (196)
T ss_dssp EEEEEEE-BTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCE
T ss_pred EEEEEec-CCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCC
Confidence 3445543 4459999999876543 489999999999999998899999999999999999999999999999999
Q ss_pred eEEEEeeecc
Q psy4897 97 VVELEVGVGY 106 (774)
Q Consensus 97 ~V~L~V~R~~ 106 (774)
.+.|+|.|+.
T Consensus 181 ~v~l~v~R~~ 190 (196)
T 3gsl_A 181 VVYLKVAKPS 190 (196)
T ss_dssp EEEEEEEEES
T ss_pred eEEEEEeCCC
Confidence 9999998865
No 240
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.15 E-value=2e-10 Score=103.77 Aligned_cols=87 Identities=32% Similarity=0.528 Sum_probs=74.9
Q ss_pred ceEEEEEeccCCCCcceEEeCCC---CCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGK---ENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~---~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
+...+++ + ...+|||++.++. ....+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..++
T Consensus 11 ~~~~v~l-~-~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 88 (106)
T 3axa_A 11 EIITVTL-K-KQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSS 88 (106)
T ss_dssp CEEEEEE-E-CSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred eEEEEEE-C-CCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4556666 4 4788999998743 234689999999999999998899999999999999999999999999999999
Q ss_pred ceEEEEEEeccc
Q psy4897 251 LVELEVKYLREV 262 (774)
Q Consensus 251 ~V~L~V~R~~~~ 262 (774)
.+.|+|.|....
T Consensus 89 ~v~l~v~R~~~~ 100 (106)
T 3axa_A 89 VVTLEVAKQGAI 100 (106)
T ss_dssp EEEEEEECCCSS
T ss_pred eEEEEEEeCCcc
Confidence 999999987654
No 241
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=2e-10 Score=103.96 Aligned_cols=87 Identities=28% Similarity=0.434 Sum_probs=75.8
Q ss_pred ceEEEEEeccCCCCcceEEeC---CCC---CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKG---GKE---NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 247 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~g---g~~---~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~ 247 (774)
+.+.+.+.+. ..+|||.+.+ +.+ ...+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++.
T Consensus 9 ~~~~v~l~k~-~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 87 (107)
T 1wf8_A 9 ELFPVELEKD-EDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN 87 (107)
T ss_dssp EEEEEEEECB-TTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH
T ss_pred eEEEEEEEEC-CCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 4667788775 5789999998 333 24689999999999999998899999999999999999999999999999
Q ss_pred cCcceEEEEEEecc
Q psy4897 248 AGKLVELEVKYLRE 261 (774)
Q Consensus 248 ~g~~V~L~V~R~~~ 261 (774)
.++.+.|+|.|...
T Consensus 88 ~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 88 TKGNVRFVIGREKP 101 (107)
T ss_dssp CCSEEEEEEEEECC
T ss_pred CCCeEEEEEEeCCC
Confidence 99999999998654
No 242
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=2.8e-10 Score=102.02 Aligned_cols=88 Identities=34% Similarity=0.551 Sum_probs=74.0
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC---------CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN---------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 244 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~---------~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~ 244 (774)
.++++.+.+.....|||.+.++.+. ..+++|..|.++|||+++|.|++||+|++|||+++.++++.++.++
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3678888887778899999875431 2579999999999999997799999999999999999999999999
Q ss_pred HHHcCcceEEEEEEecc
Q psy4897 245 LKRAGKLVELEVKYLRE 261 (774)
Q Consensus 245 Lk~~g~~V~L~V~R~~~ 261 (774)
|+..++.+.|+|.|.+.
T Consensus 84 l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 84 IRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHTCCSSEEEEEECCCC
T ss_pred HHhCCCcEEEEEEECCC
Confidence 99877799999988654
No 243
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=2.8e-10 Score=103.48 Aligned_cols=87 Identities=24% Similarity=0.353 Sum_probs=76.7
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC---CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~---~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
+.+.+.+.+. ..+|||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++..++..++
T Consensus 8 ~~~~v~l~~~-~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 86 (110)
T 1um1_A 8 YVFTVELERG-PSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGK 86 (110)
T ss_dssp CEEEEEEECC-TTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCS
T ss_pred cEEEEEEEEC-CCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 5778888875 47899999886542 4589999999999999998899999999999999999999999999999899
Q ss_pred ceEEEEEEecc
Q psy4897 251 LVELEVKYLRE 261 (774)
Q Consensus 251 ~V~L~V~R~~~ 261 (774)
.+.|+|.|...
T Consensus 87 ~v~l~v~R~~~ 97 (110)
T 1um1_A 87 KMRFLVAKSDV 97 (110)
T ss_dssp EEEEEEECCCH
T ss_pred eEEEEEEeCCc
Confidence 99999998654
No 244
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.14 E-value=1.4e-10 Score=108.76 Aligned_cols=89 Identities=25% Similarity=0.359 Sum_probs=77.1
Q ss_pred cceEEEEEeccC-CCCcceEEeCCCC---------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHH
Q psy4897 173 NQKRIIRVKKSE-NNGLGISIKGGKE---------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAV 242 (774)
Q Consensus 173 ~~~r~V~L~k~~-~~~LGfsi~gg~~---------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v 242 (774)
...+.+.+.+.. ..+|||.+.++.+ ...+++|+.|.+++||+++|.|++||+|++|||++|.+.++++++
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 107 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT 107 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH
T ss_pred CccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 357889998875 5789999987643 124799999999999999987899999999999999999999999
Q ss_pred HHHHHcCcceEEEEEEecc
Q psy4897 243 KALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 243 ~~Lk~~g~~V~L~V~R~~~ 261 (774)
.+|+..+..+.|+|.|..+
T Consensus 108 ~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 108 DMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHTTTSEEEEEECCCC
T ss_pred HHHHcCCCeEEEEEEECCc
Confidence 9999988899999988654
No 245
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.13 E-value=5.1e-11 Score=111.94 Aligned_cols=83 Identities=24% Similarity=0.289 Sum_probs=72.5
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCc
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGK 96 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~ 96 (774)
..++++.+ .+...+|||+|.+. ..+++|..|.++|||+++|+|++||+|++|||++|.+.++.+++.+++. .|+
T Consensus 26 ~~~~~~~l-~k~~~glG~~i~~~---~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~ 101 (126)
T 1wif_A 26 NKVIQTKL-TVGNLGLGLVVIQN---GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGT 101 (126)
T ss_dssp CCEEEEEE-ECCTTCCCCCEEEE---TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSC
T ss_pred CceEEEEE-ecCCceEeEEEEcC---CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Confidence 35666776 46678999999863 3579999999999999998899999999999999999999999999997 588
Q ss_pred eEEEEeeec
Q psy4897 97 VVELEVGVG 105 (774)
Q Consensus 97 ~V~L~V~R~ 105 (774)
.|+|+|.|+
T Consensus 102 ~v~l~V~R~ 110 (126)
T 1wif_A 102 VLQIKAYRG 110 (126)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEEEC
Confidence 999999886
No 246
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.13 E-value=3.2e-10 Score=100.42 Aligned_cols=85 Identities=40% Similarity=0.581 Sum_probs=74.2
Q ss_pred eEEEEEeccCCCCcceEEeCCCC------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKE------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
...+.+.+. ..+|||.+.++.+ ...+++|..|.+++||+++| |++||+|++|||+++.+.++.+++..++..
T Consensus 4 ~~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 4 ELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp EEEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred EEEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 456677765 7899999987654 35789999999999999998 999999999999999999999888888888
Q ss_pred CcceEEEEEEecc
Q psy4897 249 GKLVELEVKYLRE 261 (774)
Q Consensus 249 g~~V~L~V~R~~~ 261 (774)
+..+.|+|.|.++
T Consensus 82 g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 82 GTAVQMRVWRERE 94 (97)
T ss_dssp CSEEEEEEECCSS
T ss_pred CCeEEEEEEeCCc
Confidence 9999999998654
No 247
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.13 E-value=2.2e-10 Score=100.22 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=66.9
Q ss_pred EEEEEeecCC--cccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceE
Q psy4897 23 SENYKYTENN--GLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVV 98 (774)
Q Consensus 23 ~V~l~rk~~~--gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V 98 (774)
.+.+.+.++. +|||++... ..+++|..|.|+|||+++| |++||+|++|||+++.+.++.++..+++. .++.|
T Consensus 6 ~~~~~~~~~~~~~lG~~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v 81 (90)
T 2eaq_A 6 RISINQTPGKSLDFGFTIKWD---IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHL 81 (90)
T ss_dssp EEEEECCTTCSSCCSEEEEEE---TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEE
T ss_pred EEEEEecCCCCCcccEEEEec---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEE
Confidence 4556566554 899998743 3589999999999999998 99999999999999987788888888884 58899
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|++
T Consensus 82 ~l~v~R~g 89 (90)
T 2eaq_A 82 VMDVRRYG 89 (90)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCC
Confidence 99998753
No 248
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.13 E-value=3.4e-10 Score=104.18 Aligned_cols=86 Identities=26% Similarity=0.363 Sum_probs=74.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..+.+.+.+...+.+||.+.++.+...+++|..|.++|||+++|.|++||+|++|||+++.+.+++++.++|+..++.+.
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~ 103 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 103 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 46888998887778999999876655689999999999999997799999999999999988889999999998777888
Q ss_pred EEEEEe
Q psy4897 254 LEVKYL 259 (774)
Q Consensus 254 L~V~R~ 259 (774)
|+|.+.
T Consensus 104 l~v~~~ 109 (114)
T 2gzv_A 104 IHYNKL 109 (114)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 888654
No 249
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.13 E-value=6.6e-11 Score=104.68 Aligned_cols=84 Identities=23% Similarity=0.428 Sum_probs=73.2
Q ss_pred EEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEE
Q psy4897 178 IRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVK 257 (774)
Q Consensus 178 V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~ 257 (774)
+.+......+|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++.++.++++..++.+.|+|.
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~ 86 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLD 86 (94)
T ss_dssp EEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEE
T ss_pred EEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 3444456789999998876666789999999999999998 999999999999999999999999999987789999999
Q ss_pred Eeccc
Q psy4897 258 YLREV 262 (774)
Q Consensus 258 R~~~~ 262 (774)
|.++.
T Consensus 87 R~g~~ 91 (94)
T 1vb7_A 87 RSSGP 91 (94)
T ss_dssp CCCCC
T ss_pred ECCcC
Confidence 87653
No 250
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.13 E-value=4.6e-10 Score=104.24 Aligned_cols=90 Identities=24% Similarity=0.390 Sum_probs=78.5
Q ss_pred ccceEEEEEeccCCCCcceEEeCCC----CCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGK----ENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 247 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~----~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~ 247 (774)
..+.+.+.+.+....+|||.+.++. ....+++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+.
T Consensus 13 ~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 13 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp CEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3467888998877799999999762 235789999999999999997799999999999999999999999999998
Q ss_pred c--CcceEEEEEEecc
Q psy4897 248 A--GKLVELEVKYLRE 261 (774)
Q Consensus 248 ~--g~~V~L~V~R~~~ 261 (774)
. ++.+.|+|.|...
T Consensus 93 ~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 93 SSITSKVTLEIEFDVA 108 (122)
T ss_dssp HTTTTCEEEEEEEECC
T ss_pred CCCCCeEEEEEEECCc
Confidence 4 7899999998654
No 251
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.13 E-value=3.7e-10 Score=99.85 Aligned_cols=81 Identities=31% Similarity=0.381 Sum_probs=70.2
Q ss_pred EEEEEeccCCCCcceEEeCCCC--------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH
Q psy4897 176 RIIRVKKSENNGLGISIKGGKE--------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 247 (774)
Q Consensus 176 r~V~L~k~~~~~LGfsi~gg~~--------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~ 247 (774)
.++.+.+. .+|||.+.++.+ ...+++|..|.+++||++ | |++||+|++|||+++.++++.+++..++.
T Consensus 5 ~~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (95)
T 1mfg_A 5 IRVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT 80 (95)
T ss_dssp EEEEEECS--SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred EEEEECCC--CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhc
Confidence 44556553 489999998753 346899999999999999 7 99999999999999999999999999998
Q ss_pred cCcceEEEEEEec
Q psy4897 248 AGKLVELEVKYLR 260 (774)
Q Consensus 248 ~g~~V~L~V~R~~ 260 (774)
.++.+.|+|.|..
T Consensus 81 ~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 81 FQNTVELIIVREV 93 (95)
T ss_dssp CCSEEEEEEEEEC
T ss_pred CCCeEEEEEEeCC
Confidence 8999999998864
No 252
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.13 E-value=2e-10 Score=102.97 Aligned_cols=86 Identities=27% Similarity=0.444 Sum_probs=75.5
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
.+|++.+.+. ..++||.+.++.+ ..+++|..|.+++||+++| |++||+|++|||+++.++++++++.+++..++.+.
T Consensus 6 ~~r~v~l~k~-~~g~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 82 (102)
T 2d90_A 6 SGRVVVIKKG-SNGYGFYLRAGPE-QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTT 82 (102)
T ss_dssp SSEEEEEECC-SSSSSCEEEECSS-SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEE
T ss_pred CCEEEEEeeC-CCCccEEEEeecC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 5788999885 5689999987533 4689999999999999998 99999999999999999999999999998889999
Q ss_pred EEEEEeccc
Q psy4897 254 LEVKYLREV 262 (774)
Q Consensus 254 L~V~R~~~~ 262 (774)
|+|.|....
T Consensus 83 l~v~r~~~~ 91 (102)
T 2d90_A 83 LLVLDKEAE 91 (102)
T ss_dssp EEECSTTCC
T ss_pred EEEEECCCc
Confidence 999876543
No 253
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=2.7e-10 Score=103.26 Aligned_cols=88 Identities=31% Similarity=0.480 Sum_probs=77.2
Q ss_pred cceEEEEEeccCCCCcceEEe-----CCCCC---CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy4897 173 NQKRIIRVKKSENNGLGISIK-----GGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 244 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~-----gg~~~---~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~ 244 (774)
.+.+.+.+.+. ..+|||.+. ++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+
T Consensus 8 ~~~~~v~l~k~-~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAKN-DNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEESS-SCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEEC-CCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35778888875 578999998 65442 4689999999999999998899999999999999999899999999
Q ss_pred HHHcCcceEEEEEEecc
Q psy4897 245 LKRAGKLVELEVKYLRE 261 (774)
Q Consensus 245 Lk~~g~~V~L~V~R~~~ 261 (774)
++..++.+.|+|.|.+.
T Consensus 87 ~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHTTSEEEEEEECCCC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 99999999999988654
No 254
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.12 E-value=3.8e-10 Score=106.37 Aligned_cols=77 Identities=32% Similarity=0.427 Sum_probs=68.4
Q ss_pred CCCCcceEEeCCCCC---CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--CcceEEEEEE
Q psy4897 184 ENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GKLVELEVKY 258 (774)
Q Consensus 184 ~~~~LGfsi~gg~~~---~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~--g~~V~L~V~R 258 (774)
...+|||.+.++.+. ..+++|..|.+++||+++|+|++||+|++|||+++.++++++++++|+.. ++.|.|+|.|
T Consensus 46 ~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 125 (131)
T 1wfg_A 46 SGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSR 125 (131)
T ss_dssp SCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEE
T ss_pred CCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEc
Confidence 577899999886543 34899999999999999988999999999999999999999999999985 4889999988
Q ss_pred ec
Q psy4897 259 LR 260 (774)
Q Consensus 259 ~~ 260 (774)
..
T Consensus 126 ~g 127 (131)
T 1wfg_A 126 SG 127 (131)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 255
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=1e-10 Score=105.21 Aligned_cols=85 Identities=25% Similarity=0.403 Sum_probs=74.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
+...+.+. ...+|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 5 ~~~~v~l~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 81 (103)
T 1wf7_A 5 SSGSVSLV--GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLN 81 (103)
T ss_dssp CCEEEEEE--SSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEE
T ss_pred CEEEEEEe--CCCccCEEEeccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 35566666 3578999999887767789999999999999998 99999999999999999999999999998888999
Q ss_pred EEEEEecc
Q psy4897 254 LEVKYLRE 261 (774)
Q Consensus 254 L~V~R~~~ 261 (774)
|+|.|...
T Consensus 82 l~v~R~g~ 89 (103)
T 1wf7_A 82 MTLQRASA 89 (103)
T ss_dssp EEECCCSC
T ss_pred EEEEeCCC
Confidence 99987654
No 256
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.12 E-value=2.1e-10 Score=104.21 Aligned_cols=82 Identities=23% Similarity=0.315 Sum_probs=72.8
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEE
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVEL 254 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L 254 (774)
...+.+.+....++||.+.+. ..+++|..|.++|||+++|+|++||+|++|||++|.+.++.++..+++..++.+.|
T Consensus 3 ~~~v~L~k~~~~glG~~i~~~---~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l 79 (106)
T 2la8_A 3 KFNVDLMKKAGKELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSM 79 (106)
T ss_dssp EEEEEECCBSSSTTCCEEEEC---SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEE
T ss_pred EEEEEEEeCCCCccCEEEEeC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Confidence 456778777788999998762 46899999999999999988999999999999999999999999999988889999
Q ss_pred EEEEe
Q psy4897 255 EVKYL 259 (774)
Q Consensus 255 ~V~R~ 259 (774)
+|.|.
T Consensus 80 ~v~R~ 84 (106)
T 2la8_A 80 EVTRP 84 (106)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99874
No 257
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.12 E-value=3e-10 Score=101.04 Aligned_cols=83 Identities=23% Similarity=0.320 Sum_probs=73.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
....+.+.+....++||.+.+. ..+++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~ 84 (96)
T 2qkv_A 8 EKFNVDLMKKAGKELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVS 84 (96)
T ss_dssp CCEEEEEECBTTBCCCEEEEEC---SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ceEEEEEEeCCCCCccEEEEeC---CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEE
Confidence 4567788776678899998762 4689999999999999998899999999999999999999999999999888999
Q ss_pred EEEEEe
Q psy4897 254 LEVKYL 259 (774)
Q Consensus 254 L~V~R~ 259 (774)
|+|.|.
T Consensus 85 l~v~R~ 90 (96)
T 2qkv_A 85 MEVTRP 90 (96)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999874
No 258
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=4.3e-10 Score=100.23 Aligned_cols=82 Identities=21% Similarity=0.325 Sum_probs=69.2
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc--C
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--G 95 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a--g 95 (774)
..+.+++.+.+ ...+|||+|.+. ..|++|..|.++ |+++| |++||+|++|||++|.+++|.+++.+++.. +
T Consensus 8 ~~~~~~v~l~~-~~~g~G~~i~~~---~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 80 (96)
T 1ujv_A 8 QAELMTLTIVK-GAQGFGFTIADS---PTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPIG 80 (96)
T ss_dssp CCCCEEEEEEC-CSSSSSEEEEEE---TTEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCTT
T ss_pred CceEEEEEEEe-CCCceeEEEEcC---CCCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCC
Confidence 45677888865 558999999743 347999999984 66766 999999999999999999999999999984 7
Q ss_pred ceEEEEeeecc
Q psy4897 96 KVVELEVGVGY 106 (774)
Q Consensus 96 ~~V~L~V~R~~ 106 (774)
+.|.|+|.|+.
T Consensus 81 ~~v~l~v~R~g 91 (96)
T 1ujv_A 81 SETSLIIHRGS 91 (96)
T ss_dssp SEEEEEEECCS
T ss_pred CEEEEEEEECC
Confidence 89999998865
No 259
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=1.4e-10 Score=102.26 Aligned_cols=82 Identities=24% Similarity=0.358 Sum_probs=72.3
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..|+|.+.|....+|||.+.+. ..+++|..|.+++||+++|.|++||+|++|||+++ +.+++++.++|+..++.+.
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~---~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~ 81 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVE---GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVI 81 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEES---SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBC
T ss_pred CcEEEEEEECCCCcEeEEEEec---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEE
Confidence 3567777777778999999873 46899999999999999877999999999999999 7889999999998888999
Q ss_pred EEEEEe
Q psy4897 254 LEVKYL 259 (774)
Q Consensus 254 L~V~R~ 259 (774)
|+|.|.
T Consensus 82 l~v~~~ 87 (91)
T 2e7k_A 82 LKILSG 87 (91)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 998764
No 260
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.11 E-value=3.1e-10 Score=111.88 Aligned_cols=85 Identities=27% Similarity=0.423 Sum_probs=74.0
Q ss_pred ceEEEEEeccCCCCcceEEeC---CCC---CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKG---GKE---NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 247 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~g---g~~---~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~ 247 (774)
+...+.+.+.. .+|||++.+ +.+ ...+++|..|.+++||+++|+|++||+|++|||++|.++++.+++.+|+.
T Consensus 80 ~~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~ 158 (170)
T 3egg_C 80 ELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 158 (170)
T ss_dssp EEEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH
T ss_pred eEEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45667787754 689999988 322 13679999999999999998899999999999999999999999999999
Q ss_pred cCcceEEEEEEe
Q psy4897 248 AGKLVELEVKYL 259 (774)
Q Consensus 248 ~g~~V~L~V~R~ 259 (774)
++..|.|+|.|.
T Consensus 159 ~g~~v~L~V~R~ 170 (170)
T 3egg_C 159 TKGRVRFMIGRE 170 (170)
T ss_dssp CCSEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 999999999873
No 261
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.11 E-value=4.8e-10 Score=100.58 Aligned_cols=86 Identities=20% Similarity=0.323 Sum_probs=72.4
Q ss_pred ceEEEEEeccCCCCcceEEeCCCC--CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cC
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKE--NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AG 249 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~--~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g 249 (774)
..+.+.+.+....+|||.+..... ...+++|..|.+++||+++++|++||+|++|||+++.+.++++++++|+. .+
T Consensus 9 ~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g 88 (101)
T 2yt7_A 9 NCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQ 88 (101)
T ss_dssp CCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTS
T ss_pred ceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 467788887766799999975211 12369999999999999976699999999999999988889999999998 78
Q ss_pred cceEEEEEEe
Q psy4897 250 KLVELEVKYL 259 (774)
Q Consensus 250 ~~V~L~V~R~ 259 (774)
..++|+|.|.
T Consensus 89 ~~v~l~v~R~ 98 (101)
T 2yt7_A 89 TSVTLSIVHC 98 (101)
T ss_dssp SEEEEEECCC
T ss_pred CeEEEEEEeC
Confidence 8999999764
No 262
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.11 E-value=1e-10 Score=100.80 Aligned_cols=80 Identities=26% Similarity=0.511 Sum_probs=71.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
+++.+.+.+. ..++||.+.+. .+++|..|.+++||+++| |++||+|++|||+++.++++++++.+++..++.+.
T Consensus 2 ~~r~v~l~~~-~~g~G~~~~~~----~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 75 (83)
T 2kv8_A 2 RVRSVEVARG-RAGYGFTLSGQ----APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLH 75 (83)
T ss_dssp CEEEEEECCC-SSCCSCBCCCS----SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEE
T ss_pred CcEEEEEEeC-CCcccEEEEcC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 4688899886 47899988763 479999999999999998 99999999999999999999999999988778899
Q ss_pred EEEEEe
Q psy4897 254 LEVKYL 259 (774)
Q Consensus 254 L~V~R~ 259 (774)
|+|.|.
T Consensus 76 l~v~R~ 81 (83)
T 2kv8_A 76 MVIAEG 81 (83)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999875
No 263
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.11 E-value=2.2e-10 Score=115.01 Aligned_cols=83 Identities=20% Similarity=0.285 Sum_probs=72.5
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEE
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVEL 100 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L 100 (774)
.+++.+.+....+|||++.++ ..|++|.+|.++|||+++|+|++||+|++|||++|.++++.+++.+++.++..+.|
T Consensus 114 ~~~v~l~~~~~~~lG~~~~~~---~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L 190 (206)
T 3r0h_A 114 KFNVDLMKKAGKELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSM 190 (206)
T ss_dssp EEEEEEECCTTCCCCEEEEEC---SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEE
T ss_pred EEEEEEecCCCCccCeEEEcC---CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 344555555667999999854 35899999999999999988999999999999999999999999999999999999
Q ss_pred Eeeecc
Q psy4897 101 EVGVGY 106 (774)
Q Consensus 101 ~V~R~~ 106 (774)
+|.|..
T Consensus 191 ~V~R~~ 196 (206)
T 3r0h_A 191 EVTRPK 196 (206)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 998864
No 264
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.10 E-value=4.6e-10 Score=104.70 Aligned_cols=88 Identities=34% Similarity=0.551 Sum_probs=76.3
Q ss_pred ceEEEEEeccCCCCcceEEeCCCC---------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKE---------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 244 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~---------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~ 244 (774)
.++.+.+.+.....|||.+.++.+ ...+++|..|.++|||+++|.|++||+|++|||+++.++++++++++
T Consensus 24 ~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 103 (123)
T 2iwq_A 24 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 103 (123)
T ss_dssp CCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 467888888777889999976432 12579999999999999997799999999999999999999999999
Q ss_pred HHHcCcceEEEEEEecc
Q psy4897 245 LKRAGKLVELEVKYLRE 261 (774)
Q Consensus 245 Lk~~g~~V~L~V~R~~~ 261 (774)
|+..++.+.|+|.|.+.
T Consensus 104 l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 104 IRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHCCSSEEEEEECCCC
T ss_pred HHcCCCeEEEEEEECCc
Confidence 99988899999988654
No 265
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=2.3e-10 Score=103.21 Aligned_cols=85 Identities=26% Similarity=0.387 Sum_probs=75.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
.+|++.+.+ ...+|||.+.+... ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 8 ~~r~v~l~k-~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 84 (106)
T 2eei_A 8 QPRLCYLVK-EGGSYGFSLKTVQG-KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVM 84 (106)
T ss_dssp SSEEEEEEC-CSSSCSCCEECCSS-CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEE
T ss_pred CCEEEEEEE-CCCCCCEEEEeccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 578899988 47899999976532 4689999999999999998 99999999999999999999999999998888999
Q ss_pred EEEEEecc
Q psy4897 254 LEVKYLRE 261 (774)
Q Consensus 254 L~V~R~~~ 261 (774)
|+|.|...
T Consensus 85 l~v~r~~~ 92 (106)
T 2eei_A 85 FLLVDKET 92 (106)
T ss_dssp EEECCTTT
T ss_pred EEEEcCch
Confidence 99987544
No 266
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.10 E-value=4.5e-10 Score=95.67 Aligned_cols=75 Identities=19% Similarity=0.291 Sum_probs=65.4
Q ss_pred EEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeee
Q psy4897 25 NYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGV 104 (774)
Q Consensus 25 ~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R 104 (774)
.+.......|||.+. .|++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..+..+.|+|.|
T Consensus 6 ~~~~~~~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 79 (81)
T 2rcz_A 6 LVKSRKNEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR 79 (81)
T ss_dssp EECCSTTCCCCEEEE------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC
T ss_pred EEECCCCCCCCEEEe------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEe
Confidence 444556789999887 36999999999999999779999999999999999999999999999887788999876
Q ss_pred c
Q psy4897 105 G 105 (774)
Q Consensus 105 ~ 105 (774)
+
T Consensus 80 ~ 80 (81)
T 2rcz_A 80 D 80 (81)
T ss_dssp -
T ss_pred C
Confidence 4
No 267
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.10 E-value=3.3e-10 Score=103.46 Aligned_cols=87 Identities=28% Similarity=0.432 Sum_probs=75.4
Q ss_pred ceEEEEEeccCCCCcceEEeC---CCC---CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKG---GKE---NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 247 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~g---g~~---~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~ 247 (774)
+.+.+.+.+. ..+|||++.+ +.+ ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 4 ~~~~v~l~k~-~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (113)
T 2g5m_B 4 ELFPVELEKD-SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 82 (113)
T ss_dssp EEEEEECCCC-SSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEEeC-CCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 3566777764 5789999987 332 24689999999999999998899999999999999999999999999999
Q ss_pred cCcceEEEEEEecc
Q psy4897 248 AGKLVELEVKYLRE 261 (774)
Q Consensus 248 ~g~~V~L~V~R~~~ 261 (774)
.++.+.|+|.|.+.
T Consensus 83 ~g~~v~l~v~R~~~ 96 (113)
T 2g5m_B 83 TKGRVRFMIGRERP 96 (113)
T ss_dssp SCSSCEEEEEECCC
T ss_pred CCCeEEEEEEeCCC
Confidence 99999999998765
No 268
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.09 E-value=5.5e-10 Score=104.20 Aligned_cols=85 Identities=20% Similarity=0.210 Sum_probs=71.7
Q ss_pred CCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc-Cce
Q psy4897 19 RDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-GKV 97 (774)
Q Consensus 19 ~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a-g~~ 97 (774)
...+.+.+.+ ...+|||+|.++.+. .+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++.. +..
T Consensus 8 ~~~r~v~l~~-~~~g~G~~l~~~~~~-~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 84 (128)
T 2kjd_A 8 LRPRLCTMKK-GPSGYGFNLHSDKSK-PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDET 84 (128)
T ss_dssp CCCEEEEEEC-CSSSCCEEEEECSSS-CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEE
T ss_pred CCcEEEEEec-CCCcccEEEEecCCC-CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCE
Confidence 3456666655 457899999987543 489999999999999998 999999999999999999999999999886 556
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
+.|+|.|+.
T Consensus 85 ~~l~v~R~g 93 (128)
T 2kjd_A 85 KLLVVDRET 93 (128)
T ss_dssp EEEEECHHH
T ss_pred EEEEEEeCC
Confidence 778888765
No 269
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.09 E-value=3.9e-10 Score=101.28 Aligned_cols=83 Identities=31% Similarity=0.398 Sum_probs=72.4
Q ss_pred cceEEEEEeccCCCCcceEEeCCCC--------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKE--------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKA 244 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~--------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~ 244 (774)
.+...+.+.+. .+|||++.++.+ ...+++|..|.+++||++ | |++||+|++|||+++.++++.+++..
T Consensus 10 ~~~~~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~ 85 (103)
T 1n7t_A 10 KQEIRVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSL 85 (103)
T ss_dssp CCCEEEEEECS--SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred cEEEEEEEccC--CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34566777774 489999998653 356899999999999999 7 99999999999999999999999999
Q ss_pred HHHcCcceEEEEEEe
Q psy4897 245 LKRAGKLVELEVKYL 259 (774)
Q Consensus 245 Lk~~g~~V~L~V~R~ 259 (774)
++..++.+.|+|.|.
T Consensus 86 ~~~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 86 LKTFQNTVELIIVRE 100 (103)
T ss_dssp HHHCCSEEEEEEECC
T ss_pred hhcCCCeEEEEEEec
Confidence 999899999999875
No 270
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=1.3e-10 Score=104.19 Aligned_cols=87 Identities=31% Similarity=0.525 Sum_probs=74.9
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
....+.+.+. ..++||.+.++.+...+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 11 ~~~~v~l~~~-~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 89 (103)
T 1wfv_A 11 DYFTVDMEKG-AKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVR 89 (103)
T ss_dssp CCEECCEECC-TTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEEC
T ss_pred eEEEEEEecC-CCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 3455666664 467999998876656689999999999999997799999999999999999999999999998889999
Q ss_pred EEEEEecc
Q psy4897 254 LEVKYLRE 261 (774)
Q Consensus 254 L~V~R~~~ 261 (774)
|+|.|...
T Consensus 90 l~v~R~~~ 97 (103)
T 1wfv_A 90 LLLKRGTG 97 (103)
T ss_dssp EEEECTTC
T ss_pred EEEEECCC
Confidence 99988654
No 271
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=1.4e-10 Score=105.63 Aligned_cols=93 Identities=42% Similarity=0.591 Sum_probs=80.1
Q ss_pred ccccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcC
Q psy4897 170 SVENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG 249 (774)
Q Consensus 170 ~~~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g 249 (774)
.....++.+.+.+. ..+|||.+.++.+ ..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..+
T Consensus 11 ~~~~~~~~v~l~k~-~~glG~~l~~~~~-~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~ 88 (113)
T 1um7_A 11 GDAREPRKIILHKG-STGLGFNIVGGED-GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAG 88 (113)
T ss_dssp CCCCSEEEEEEECC-SSCSSBCCBCCST-TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCC
T ss_pred cCCCceEEEEEEEC-CCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34456889999885 5789999987643 468999999999999999779999999999999999999999999999888
Q ss_pred cceEEEEEEeccccc
Q psy4897 250 KLVELEVKYLREVTP 264 (774)
Q Consensus 250 ~~V~L~V~R~~~~~~ 264 (774)
+.+.|+|.|.+..+.
T Consensus 89 ~~v~l~v~r~~~~~~ 103 (113)
T 1um7_A 89 QSVTIVAQYRPEEYS 103 (113)
T ss_dssp SEEEEEEECCHHHHH
T ss_pred CcEEEEEEECcchhh
Confidence 999999998765443
No 272
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.09 E-value=4.1e-10 Score=103.26 Aligned_cols=88 Identities=40% Similarity=0.628 Sum_probs=76.0
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCC-CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENK-MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~-~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
+.+.+.+.+. ..+|||.+.++.+.. .+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+++..+..+
T Consensus 17 ~~~~v~l~~~-~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 95 (116)
T 2dm8_A 17 QEMIIEISKG-RSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKV 95 (116)
T ss_dssp SCEEEEEECC-SSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEE
T ss_pred CEEEEEEEEC-CCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 3567777764 678999998875543 58999999999999999779999999999999999999999999999888899
Q ss_pred EEEEEEeccc
Q psy4897 253 ELEVKYLREV 262 (774)
Q Consensus 253 ~L~V~R~~~~ 262 (774)
.|+|.|....
T Consensus 96 ~l~v~R~~~~ 105 (116)
T 2dm8_A 96 RLVVYRDEAH 105 (116)
T ss_dssp EEEEECCSSC
T ss_pred EEEEEeCCcc
Confidence 9999886553
No 273
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.09 E-value=2.3e-10 Score=114.51 Aligned_cols=87 Identities=31% Similarity=0.562 Sum_probs=79.4
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
...+.+.+.+....+|||.+.++.+...+++|..|.++|||+++| |++||+|++|||++|.++++++++.+|+. ++.+
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v 160 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EKTV 160 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEE
T ss_pred CceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeE
Confidence 357889999987889999999876666789999999999999998 99999999999999999999999999988 8999
Q ss_pred EEEEEEecc
Q psy4897 253 ELEVKYLRE 261 (774)
Q Consensus 253 ~L~V~R~~~ 261 (774)
.|+|.|.+.
T Consensus 161 ~l~v~r~g~ 169 (192)
T 3k1r_A 161 SIKVRHIGL 169 (192)
T ss_dssp EEEEEECCE
T ss_pred EEEEEECCc
Confidence 999998765
No 274
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=1.5e-10 Score=103.67 Aligned_cols=86 Identities=26% Similarity=0.405 Sum_probs=73.3
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEE
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVEL 254 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L 254 (774)
.+.+.+......+|||.+.++.+...+++|..|.+++||+++|+|++||+|++|||+++.+. +.+++.+++..++.+.|
T Consensus 10 ~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l 88 (100)
T 2edp_A 10 FQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILKL 88 (100)
T ss_dssp CEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEE
T ss_pred cEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEE
Confidence 45555555556789999998766567899999999999999944999999999999999986 88999999988899999
Q ss_pred EEEEecc
Q psy4897 255 EVKYLRE 261 (774)
Q Consensus 255 ~V~R~~~ 261 (774)
+|.|...
T Consensus 89 ~v~R~~~ 95 (100)
T 2edp_A 89 IVRRRNS 95 (100)
T ss_dssp EEEECCC
T ss_pred EEEeCCC
Confidence 9998754
No 275
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.08 E-value=4.9e-10 Score=103.62 Aligned_cols=84 Identities=30% Similarity=0.553 Sum_probs=71.5
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCC-CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc----
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENK-MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA---- 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~-~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~---- 248 (774)
..+.+.+.+. .+|||++.++.+.. .+++|.+|.+++||+++|+|++||+|++|||+++.+++|++++++|+..
T Consensus 18 ~~~~~~~~~~--~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~ 95 (118)
T 1v6b_A 18 DVRLLRIKKE--GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQG 95 (118)
T ss_dssp CEEEEEEESC--SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHT
T ss_pred eEEEEEECCC--CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcC
Confidence 3566666664 58999999876543 4599999999999999955999999999999999999999999999864
Q ss_pred CcceEEEEEEe
Q psy4897 249 GKLVELEVKYL 259 (774)
Q Consensus 249 g~~V~L~V~R~ 259 (774)
+..++|+|.|.
T Consensus 96 g~~v~l~v~r~ 106 (118)
T 1v6b_A 96 GDWIDLVVAVC 106 (118)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 78999999874
No 276
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.08 E-value=4.7e-10 Score=103.38 Aligned_cols=93 Identities=41% Similarity=0.596 Sum_probs=79.5
Q ss_pred cccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 171 VENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 171 ~~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
.....+.+.+.+. ..+|||.+.++.+ ..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++..++..++
T Consensus 11 ~~~~~~~v~l~k~-~~glG~~l~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 88 (119)
T 1tp5_A 11 IPREPRRIVIHRG-STGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQ 88 (119)
T ss_dssp CCCSCEEEEEECT-TSCCCEEEEECGG-GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred CCCccEEEEEEEC-CCCccEEEecCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3446788999885 4679999987643 3689999999999999997799999999999999999999999999998899
Q ss_pred ceEEEEEEecccccc
Q psy4897 251 LVELEVKYLREVTPY 265 (774)
Q Consensus 251 ~V~L~V~R~~~~~~~ 265 (774)
.+.|+|.|.+.....
T Consensus 89 ~v~l~v~r~~~~~~~ 103 (119)
T 1tp5_A 89 TVTIIAQYKPEEYSR 103 (119)
T ss_dssp EEEEEEEECHHHHHT
T ss_pred eEEEEEEECCchhcc
Confidence 999999987655433
No 277
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.08 E-value=7.6e-10 Score=97.72 Aligned_cols=81 Identities=28% Similarity=0.455 Sum_probs=71.2
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..|++.+.+. ..+|||.+.+. .+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++ .++.+.
T Consensus 8 ~~r~v~l~~~-~~~~G~~l~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~ 80 (93)
T 2dls_A 8 VQRCVIIQKD-QHGFGFTVSGD----RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVA 80 (93)
T ss_dssp CEEEEEEECS-SSSCCEEEECS----SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEE
T ss_pred CCEEEEEEeC-CCceeEEEeCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEE
Confidence 5788888875 57899999763 579999999999999998 9999999999999999999998888887 589999
Q ss_pred EEEEEecc
Q psy4897 254 LEVKYLRE 261 (774)
Q Consensus 254 L~V~R~~~ 261 (774)
|+|.|...
T Consensus 81 l~v~R~~~ 88 (93)
T 2dls_A 81 LTLLGSSS 88 (93)
T ss_dssp EEEECCCC
T ss_pred EEEEECCC
Confidence 99988654
No 278
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.07 E-value=3.8e-10 Score=103.39 Aligned_cols=87 Identities=25% Similarity=0.338 Sum_probs=77.4
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
.++.+.+.+.....|||.+..+.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++++++..++.+.
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 90 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVT 90 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTT-CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEE
T ss_pred CCEEEEEeCCCCCcccEEEEEecC-CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 478888988878899999886533 4689999999999999998 99999999999999999999999999998899999
Q ss_pred EEEEEeccc
Q psy4897 254 LEVKYLREV 262 (774)
Q Consensus 254 L~V~R~~~~ 262 (774)
|+|.|..+.
T Consensus 91 l~v~R~~~~ 99 (114)
T 2edz_A 91 LLVLDGDSY 99 (114)
T ss_dssp EEEECHHHH
T ss_pred EEEEECCcc
Confidence 999987654
No 279
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.07 E-value=7.4e-10 Score=97.01 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=67.8
Q ss_pred cEEEEEEee-cCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEE
Q psy4897 21 FYSENYKYT-ENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVE 99 (774)
Q Consensus 21 ~~~V~l~rk-~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~ 99 (774)
.++|.+... ....|||.+. .|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..+.
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 76 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLK 76 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred cEEEEEEeCCCCCCCCEEEe------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 345666554 3479999886 479999999999999997799999999999999999999999999998888999
Q ss_pred EEeeecc
Q psy4897 100 LEVGVGY 106 (774)
Q Consensus 100 L~V~R~~ 106 (774)
|+|.|++
T Consensus 77 l~v~r~g 83 (92)
T 3cyy_A 77 MVVQRDE 83 (92)
T ss_dssp EEEEC--
T ss_pred EEEEeCC
Confidence 9998865
No 280
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.06 E-value=1.9e-10 Score=107.44 Aligned_cols=87 Identities=29% Similarity=0.384 Sum_probs=76.5
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCC-CCCCEEEEECCEecCCCCHHHHHHHHHhc-C
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQL-YVGDAILSVNGEDLREATHDEAVKALKRA-G 95 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~L-qvGD~ILsVNG~~V~~~sh~eaV~lLk~a-g 95 (774)
+.++++|.+.+....+|||++.++.+ ..+++|..|.++|||+++| | ++||+|++|||+++.++++.++..+++.. +
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~~~-~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 83 (127)
T 1b8q_A 6 EPNVISVRLFKRKVGGLGFLVKERVS-KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS 83 (127)
T ss_dssp CCCSEEEEEECTTTSCCSCCEEECTT-SSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHSCCS
T ss_pred CCceEEEEEEeCCCCcEeEEEEecCC-CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45688899988777899999987643 3589999999999999998 6 99999999999999999999999999874 6
Q ss_pred ceEEEEeeecc
Q psy4897 96 KVVELEVGVGY 106 (774)
Q Consensus 96 ~~V~L~V~R~~ 106 (774)
+.+.|+|.|+.
T Consensus 84 ~~v~l~v~R~g 94 (127)
T 1b8q_A 84 ETHVVLILRGP 94 (127)
T ss_dssp SCEEEEEECCC
T ss_pred CeEEEEEEeCC
Confidence 78999998865
No 281
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.06 E-value=7.5e-10 Score=101.26 Aligned_cols=86 Identities=31% Similarity=0.476 Sum_probs=75.4
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcc
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKL 251 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~ 251 (774)
....+.+.+.+....+|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++.. +.
T Consensus 13 ~~~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~ 90 (114)
T 1x5n_A 13 ENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RS 90 (114)
T ss_dssp CCSSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-SS
T ss_pred CCCcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-Ce
Confidence 3456788887777889999999876666799999999999999998 999999999999999999988899988875 68
Q ss_pred eEEEEEEe
Q psy4897 252 VELEVKYL 259 (774)
Q Consensus 252 V~L~V~R~ 259 (774)
+.|+|.|.
T Consensus 91 v~l~v~r~ 98 (114)
T 1x5n_A 91 LTISIVAA 98 (114)
T ss_dssp EEEEECSS
T ss_pred EEEEEEcC
Confidence 88998775
No 282
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.06 E-value=1.5e-09 Score=98.60 Aligned_cols=87 Identities=33% Similarity=0.446 Sum_probs=73.9
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC---CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-- 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~---~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~-- 248 (774)
....+.+.+. ..++||.+.++.+. ..+++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+..
T Consensus 11 ~~~~~~l~~~-~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 89 (111)
T 2koj_A 11 KRLNIQLKKG-TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKM 89 (111)
T ss_dssp EEEEEEEECB-TTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCC
T ss_pred cEEEEEEEEC-CCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4566667664 57899999876432 26899999999999999977999999999999999999999999999984
Q ss_pred CcceEEEEEEecc
Q psy4897 249 GKLVELEVKYLRE 261 (774)
Q Consensus 249 g~~V~L~V~R~~~ 261 (774)
+..+.|+|.|.+.
T Consensus 90 g~~v~l~v~R~~~ 102 (111)
T 2koj_A 90 EGTVSLLVFRQEE 102 (111)
T ss_dssp SSEEEEEEEECCC
T ss_pred CCeEEEEEEeCCC
Confidence 7899999988654
No 283
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.06 E-value=4.7e-10 Score=101.02 Aligned_cols=82 Identities=27% Similarity=0.440 Sum_probs=70.2
Q ss_pred ceEEEEEeccCCCCcceEEeCC-------CCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy4897 174 QKRIIRVKKSENNGLGISIKGG-------KENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK 246 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg-------~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk 246 (774)
..+.+.+.+...++|||.+.+. .....+++|..|.+++||+++| |++||+|++|||+++.++++++++++|+
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 4566778887678899999872 1234689999999999999998 9999999999999999888999999999
Q ss_pred HcCcceEEEE
Q psy4897 247 RAGKLVELEV 256 (774)
Q Consensus 247 ~~g~~V~L~V 256 (774)
..++.+.|+|
T Consensus 94 ~~~~~v~l~v 103 (104)
T 2z17_A 94 SSGNLLTIET 103 (104)
T ss_dssp HTTTEEEEEC
T ss_pred hCCCcEEEEE
Confidence 9777777765
No 284
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.05 E-value=7.7e-10 Score=101.23 Aligned_cols=80 Identities=28% Similarity=0.346 Sum_probs=70.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc-ce
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK-LV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~-~V 252 (774)
.+|.+.+.+. ..++||.+.+. .|++|..|.+++||+++| |++||+|++|||+++.++++++++++|+..++ .+
T Consensus 23 ~~r~v~l~k~-~~~~G~~l~~~----~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v 96 (109)
T 2vsv_A 23 MPRSIRFTAE-EGDLGFTLRGN----APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEI 96 (109)
T ss_dssp SCEEEEECCG-GGCCCEEEESS----SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCE
T ss_pred CCEEEEEEeC-CCceeEEEeCC----CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeE
Confidence 4788999884 68999998753 578999999999999998 99999999999999998889999999998655 49
Q ss_pred EEEEEEe
Q psy4897 253 ELEVKYL 259 (774)
Q Consensus 253 ~L~V~R~ 259 (774)
.|+|.|.
T Consensus 97 ~l~V~~~ 103 (109)
T 2vsv_A 97 EMKVVSL 103 (109)
T ss_dssp EEEEESC
T ss_pred EEEEEEC
Confidence 9998764
No 285
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.05 E-value=4.9e-10 Score=126.57 Aligned_cols=81 Identities=23% Similarity=0.393 Sum_probs=72.8
Q ss_pred cEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceE
Q psy4897 21 FYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVV 98 (774)
Q Consensus 21 ~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V 98 (774)
++.|.+.+ +.+|||+|.||.+ .|++|..|.+||||+++| |++||+|++|||++|.++++.+++.+|+. +|+.|
T Consensus 2 ~r~V~l~k--~~~lG~~i~gg~~--~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v 76 (468)
T 3shw_A 2 MKLVKFRK--GDSVGLRLAGGND--VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 76 (468)
T ss_dssp EEEEEEEC--CSSCCEEEEEETT--TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred ceEEEEec--CCccceEEEccCc--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 45566655 4899999998864 689999999999999998 99999999999999999999999999998 78999
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
+|+|.|++
T Consensus 77 ~L~V~r~g 84 (468)
T 3shw_A 77 TILAQKKK 84 (468)
T ss_dssp EEEEEECH
T ss_pred EEEEEECC
Confidence 99999865
No 286
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.04 E-value=7.6e-10 Score=96.91 Aligned_cols=70 Identities=21% Similarity=0.307 Sum_probs=63.6
Q ss_pred CCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEe
Q psy4897 184 ENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYL 259 (774)
Q Consensus 184 ~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~ 259 (774)
....+||.+.+ +++|.+|.+++||+++|+|++||+|++|||+++.+.++++++++|+..++.+.|++.+.
T Consensus 11 ~~~~~G~~~~~------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~ 80 (88)
T 3e17_A 11 ANEEYGLRLGS------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRD 80 (88)
T ss_dssp TBCCCCEEEEE------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC
T ss_pred CCCCCCEEEeC------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCC
Confidence 35689998864 69999999999999998899999999999999999999999999999989999998654
No 287
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.04 E-value=1.8e-10 Score=105.60 Aligned_cols=81 Identities=26% Similarity=0.315 Sum_probs=69.3
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCc-eE
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK-VV 98 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~-~V 98 (774)
..++|.+.+ ++.+|||.+.++ .+++|..|.+++||+++| |++||+|++|||++|.++++.+++.+++..+. .+
T Consensus 15 ~~r~v~l~~-~~~~~G~~l~~~----~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v 88 (111)
T 1vae_A 15 PPRGIHFTV-EEGDLGFTLRGN----TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEV 88 (111)
T ss_dssp CCCCCCEEC-CSSCCSCCEESS----SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEE
T ss_pred CCeEEEEEc-CCCcccEEEeCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceE
Confidence 445677755 679999999764 478999999999999998 99999999999999999999999999998655 58
Q ss_pred EEEeeecc
Q psy4897 99 ELEVGVGY 106 (774)
Q Consensus 99 ~L~V~R~~ 106 (774)
.|+|.|..
T Consensus 89 ~l~V~~~~ 96 (111)
T 1vae_A 89 EMKVVSLL 96 (111)
T ss_dssp CEEEECEE
T ss_pred EEEEEecC
Confidence 99997754
No 288
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.61 E-value=2.2e-11 Score=111.90 Aligned_cols=86 Identities=49% Similarity=0.717 Sum_probs=75.6
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhh-ccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQ-TEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~-aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
....+.+.+.+....+|||.+.++.+...+++|..|.++|||++ +| |++||+|++|||+++.+.++++++.+++..++
T Consensus 25 ~~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~ 103 (112)
T 2lob_A 25 FQGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 103 (112)
Confidence 34567888888777899999998866667899999999999999 66 99999999999999999899999999998877
Q ss_pred ceEEEEEE
Q psy4897 251 LVELEVKY 258 (774)
Q Consensus 251 ~V~L~V~R 258 (774)
.+.|+|.+
T Consensus 104 ~v~l~V~~ 111 (112)
T 2lob_A 104 EIEFEVVY 111 (112)
Confidence 88888764
No 289
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.03 E-value=2e-09 Score=94.97 Aligned_cols=86 Identities=29% Similarity=0.452 Sum_probs=72.9
Q ss_pred eEEEEEeccCCCCcceEEeCCCC----CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKE----NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~----~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
...+.+.+ ...++||.+.+... ...+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..+.
T Consensus 5 ~~~v~l~~-~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 83 (97)
T 2iwn_A 5 TFDVELTK-NVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 83 (97)
T ss_dssp EEEEEEEC-BTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCS
T ss_pred EEEEEEec-CCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 44566655 36789999987643 24689999999999999997799999999999999999999999999988889
Q ss_pred ceEEEEEEecc
Q psy4897 251 LVELEVKYLRE 261 (774)
Q Consensus 251 ~V~L~V~R~~~ 261 (774)
.+.|+|.|.+.
T Consensus 84 ~v~l~v~r~g~ 94 (97)
T 2iwn_A 84 TVLLTLMRRGE 94 (97)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEeCCC
Confidence 99999988653
No 290
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.03 E-value=1e-09 Score=97.51 Aligned_cols=84 Identities=24% Similarity=0.330 Sum_probs=70.7
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc-Ccce
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-GKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~-g~~V 252 (774)
.++.+.+.+. ..++||.+.++.+ ..+++|..|.++|||+++| |++||+|++|||+++.+++++++.++|+.. +..+
T Consensus 9 ~~~~~~l~~~-~~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 85 (98)
T 2jxo_A 9 RPRLCTMKKG-PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (98)
T ss_dssp CCEEEEEECT-TTCCCEEEECCCS-SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred CcEEEEEEeC-CCcccEEEEecCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 4577788775 5789999987643 3589999999999999998 999999999999999999999999999985 4456
Q ss_pred EEEEEEec
Q psy4897 253 ELEVKYLR 260 (774)
Q Consensus 253 ~L~V~R~~ 260 (774)
.|+|.|.+
T Consensus 86 ~l~v~R~g 93 (98)
T 2jxo_A 86 LLVVDRET 93 (98)
T ss_dssp EEECCHHH
T ss_pred EEEEECCc
Confidence 68777654
No 291
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=1.9e-09 Score=95.13 Aligned_cols=74 Identities=22% Similarity=0.423 Sum_probs=63.8
Q ss_pred EEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEE
Q psy4897 177 IIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEV 256 (774)
Q Consensus 177 ~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V 256 (774)
.+...+....++||.+.+| +|.+|.++|||+++| |++||+|++|||+++.+.++++++++|+..++.+.|+|
T Consensus 15 ~~i~~~~~~~~lG~~~~~G-------~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v 86 (90)
T 1y7n_A 15 VLIRRPDLRYQLGFSVQNG-------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKT 86 (90)
T ss_dssp EEEEESSTTSCCCEEEETT-------EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEE
T ss_pred EEEEeCCCccccCeEecCC-------EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 3333444577899998643 899999999999998 99999999999999998899999999999889999988
Q ss_pred EE
Q psy4897 257 KY 258 (774)
Q Consensus 257 ~R 258 (774)
.+
T Consensus 87 ~p 88 (90)
T 1y7n_A 87 MP 88 (90)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 292
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=5.7e-09 Score=97.52 Aligned_cols=88 Identities=33% Similarity=0.527 Sum_probs=74.5
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
+.+.+.+.......+||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++.++++.++. ++.+.
T Consensus 20 ~~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v~ 97 (128)
T 1uf1_A 20 DEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHLI 97 (128)
T ss_dssp SEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEEE
T ss_pred cEEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeEE
Confidence 45667777655578999998875555689999999999999998 99999999999999999999888888877 46899
Q ss_pred EEEEEecccc
Q psy4897 254 LEVKYLREVT 263 (774)
Q Consensus 254 L~V~R~~~~~ 263 (774)
|+|.|.+...
T Consensus 98 l~v~R~g~~~ 107 (128)
T 1uf1_A 98 LTVKDVGRLP 107 (128)
T ss_dssp EEEECCSCCS
T ss_pred EEEEECCccc
Confidence 9999876643
No 293
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.01 E-value=6.2e-10 Score=99.14 Aligned_cols=82 Identities=22% Similarity=0.359 Sum_probs=69.2
Q ss_pred EEEeccCCCCcceEEeCCCCC-------CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCc
Q psy4897 178 IRVKKSENNGLGISIKGGKEN-------KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGK 250 (774)
Q Consensus 178 V~L~k~~~~~LGfsi~gg~~~-------~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~ 250 (774)
+.+.+ ...++||.+.++... ..+++|..|.++|||+++| |++||+|++|||+++.++++++++.+++..++
T Consensus 6 v~l~~-~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 83 (99)
T 3khf_A 6 IVIHS-SGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGN 83 (99)
T ss_dssp EEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred EEEEe-CCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 45555 478999999864311 1267899999999999998 99999999999999999999999999999999
Q ss_pred ceEEEEEEecc
Q psy4897 251 LVELEVKYLRE 261 (774)
Q Consensus 251 ~V~L~V~R~~~ 261 (774)
.+.|+|.|.+.
T Consensus 84 ~v~l~v~r~~~ 94 (99)
T 3khf_A 84 KISLRTTALEN 94 (99)
T ss_dssp EEEEEEECSCS
T ss_pred EEEEEEEECCC
Confidence 99999998654
No 294
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.01 E-value=3e-09 Score=98.72 Aligned_cols=86 Identities=33% Similarity=0.432 Sum_probs=72.7
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCC---CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKEN---KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-- 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~---~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~-- 248 (774)
+...+.+.+. ..++||.+.++... ..+++|..|.+++||+++|.|++||+|++|||+++.++++++++++|+..
T Consensus 30 ~~~~v~l~~~-~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 108 (121)
T 2kom_A 30 KRLNIQLKKG-TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKM 108 (121)
T ss_dssp EEEEEEEECC-TTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCS
T ss_pred eEEEEEEEcC-CCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Confidence 4556666663 57899999876432 26899999999999999977999999999999999999999999999974
Q ss_pred CcceEEEEEEec
Q psy4897 249 GKLVELEVKYLR 260 (774)
Q Consensus 249 g~~V~L~V~R~~ 260 (774)
+..+.|+|.|.+
T Consensus 109 g~~v~l~v~R~g 120 (121)
T 2kom_A 109 EGTVSLLVFRQE 120 (121)
T ss_dssp SCEEEEEEEECC
T ss_pred CCEEEEEEEeCC
Confidence 789999998754
No 295
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.01 E-value=1.7e-09 Score=94.17 Aligned_cols=83 Identities=23% Similarity=0.295 Sum_probs=68.5
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKL 251 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~ 251 (774)
+.+.+++.+. ..++||.+.+..+ ..+++|..| +++||+ +| |++||+|++|||+++.+++++++++++++ .++.
T Consensus 3 ~~~~v~l~k~-~~g~G~~~~~~~~-~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~ 77 (88)
T 3bpu_A 3 ELITVHIVKG-PMGFGFTIADSPG-GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSE 77 (88)
T ss_dssp EEEEEEEECB-TTBSSCEEEECTT-SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCE
T ss_pred cEEEEEEEcC-CCceeEEEEecCC-CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCE
Confidence 4677888885 5789999986533 357889887 999999 86 99999999999999999999999999985 6789
Q ss_pred eEEEEEEecc
Q psy4897 252 VELEVKYLRE 261 (774)
Q Consensus 252 V~L~V~R~~~ 261 (774)
+.|+|.|.+.
T Consensus 78 v~l~v~R~g~ 87 (88)
T 3bpu_A 78 VTLLVQRQTR 87 (88)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEeCCc
Confidence 9999988653
No 296
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.00 E-value=1.7e-09 Score=99.58 Aligned_cols=82 Identities=22% Similarity=0.209 Sum_probs=69.3
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--Ccc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GKL 251 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~--g~~ 251 (774)
+.++|+|.|. ..+|||++.++ ..+.+|.+|.+ +|..+| |++||+|++|||++|.+++|+|++++|+.. +..
T Consensus 12 ~~~~V~L~Kg-~~G~GFsI~~~---~~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~ 84 (113)
T 3soe_A 12 LLVTIPLIKG-PKGFGFAIADS---PTGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGAD 84 (113)
T ss_dssp EEEEEEEECB-TTBSSEEEEEE---TTEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCE
T ss_pred CEEEEEEEEC-CCcccEEEeCC---CCCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCE
Confidence 4678899885 67999999764 34567999988 466665 999999999999999999999999999984 779
Q ss_pred eEEEEEEeccc
Q psy4897 252 VELEVKYLREV 262 (774)
Q Consensus 252 V~L~V~R~~~~ 262 (774)
|+|+|.|....
T Consensus 85 v~L~V~R~g~~ 95 (113)
T 3soe_A 85 VPLLILRGGPP 95 (113)
T ss_dssp EEEEEEESSCC
T ss_pred EEEEEEECCcc
Confidence 99999987653
No 297
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.00 E-value=2e-09 Score=107.92 Aligned_cols=87 Identities=34% Similarity=0.515 Sum_probs=78.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
..+.+.+.+....+|||.+.++.+...+++|..|.+++||+++++|++||+|++|||+++.+++|.+++.+++..++.+.
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 86 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVV 86 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEE
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 46778888877899999999987777889999999999999994499999999999999999999999999998899999
Q ss_pred EEEEEec
Q psy4897 254 LEVKYLR 260 (774)
Q Consensus 254 L~V~R~~ 260 (774)
|+|.|.+
T Consensus 87 l~v~R~~ 93 (200)
T 2qt5_A 87 LEVEYEL 93 (200)
T ss_dssp EEEEEEC
T ss_pred EEEeccC
Confidence 9998864
No 298
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=6.3e-10 Score=98.99 Aligned_cols=81 Identities=22% Similarity=0.410 Sum_probs=71.4
Q ss_pred ceEEEEEeccCC-CCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 174 QKRIIRVKKSEN-NGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~-~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
..+.+++.+... .++||.+.+ ..+++|..|.+++||+ +| |++||+|++|||++|.++++.+++..++..++.+
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~----~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v 81 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISE----SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAEDSL 81 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCS----SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCE
T ss_pred ccEEEEEEECCCCCcccEEEec----CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 467888888654 479999876 4689999999999995 65 9999999999999999999999999999999999
Q ss_pred EEEEEEec
Q psy4897 253 ELEVKYLR 260 (774)
Q Consensus 253 ~L~V~R~~ 260 (774)
.|+|.|..
T Consensus 82 ~l~v~R~~ 89 (96)
T 2edv_A 82 SITVVRCT 89 (96)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 99999865
No 299
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.99 E-value=2.1e-09 Score=95.80 Aligned_cols=85 Identities=18% Similarity=0.240 Sum_probs=69.0
Q ss_pred cceEEEEEeccCC--CCcceEEeCCC-CCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcC
Q psy4897 173 NQKRIIRVKKSEN--NGLGISIKGGK-ENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG 249 (774)
Q Consensus 173 ~~~r~V~L~k~~~--~~LGfsi~gg~-~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g 249 (774)
...+.+.+.+... .++||++.... +...+++|..|.++|||+++| |++||+|++|||++|.+++++++.+++++
T Consensus 5 ~~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~-- 81 (94)
T 3kzd_A 5 KVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ-- 81 (94)
T ss_dssp CEEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS--
T ss_pred cceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--
Confidence 3477888888653 47999998743 234589999999999999998 99999999999999999999999999975
Q ss_pred cceEEEEEEec
Q psy4897 250 KLVELEVKYLR 260 (774)
Q Consensus 250 ~~V~L~V~R~~ 260 (774)
..++|+|+..+
T Consensus 82 ~~l~ltV~~~p 92 (94)
T 3kzd_A 82 PSLGLLVRTYP 92 (94)
T ss_dssp SEEEEEEEECC
T ss_pred CeEEEEEEecC
Confidence 47888887644
No 300
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.98 E-value=1.3e-09 Score=120.84 Aligned_cols=82 Identities=23% Similarity=0.384 Sum_probs=71.8
Q ss_pred CcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCce
Q psy4897 20 DFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKV 97 (774)
Q Consensus 20 ~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~ 97 (774)
.+..|.+.+. ++|||+|.||.+ .|++|..|.+||||+++| |++||+|++|||++|.++++.+++.+++. +|+.
T Consensus 9 ~~~~v~~~k~--~~lG~~i~gg~~--~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~ 83 (391)
T 3tsz_A 9 SMKLVKFRKG--DSVGLRLAGGND--VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEE 83 (391)
T ss_dssp CEEEEEEECC--SSCCEEEEEETT--TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSE
T ss_pred CcEEEEeecC--CceeEEEEecCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCe
Confidence 4455555443 479999998864 689999999999999998 99999999999999999999999999995 7899
Q ss_pred EEEEeeecc
Q psy4897 98 VELEVGVGY 106 (774)
Q Consensus 98 V~L~V~R~~ 106 (774)
|+|+|.|+.
T Consensus 84 v~l~v~r~~ 92 (391)
T 3tsz_A 84 VTILAQKKK 92 (391)
T ss_dssp EEEEEEECH
T ss_pred EEEEEeeCC
Confidence 999999875
No 301
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.98 E-value=1.9e-09 Score=96.75 Aligned_cols=72 Identities=36% Similarity=0.524 Sum_probs=63.6
Q ss_pred CCcceEEeCCCC------------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH-cCcce
Q psy4897 186 NGLGISIKGGKE------------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-AGKLV 252 (774)
Q Consensus 186 ~~LGfsi~gg~~------------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~V 252 (774)
..|||++.++.+ ...+++|..|.++|||+++| |++||+|++|||+++.+.++++++..++. .++.+
T Consensus 19 ~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v 97 (104)
T 3sfj_A 19 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVV 97 (104)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEE
T ss_pred CcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEE
Confidence 369999996543 24679999999999999998 99999999999999999999999999986 56889
Q ss_pred EEEEEE
Q psy4897 253 ELEVKY 258 (774)
Q Consensus 253 ~L~V~R 258 (774)
.|+|.|
T Consensus 98 ~l~v~R 103 (104)
T 3sfj_A 98 RLLVTR 103 (104)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999876
No 302
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.98 E-value=5e-09 Score=116.05 Aligned_cols=158 Identities=13% Similarity=0.171 Sum_probs=107.0
Q ss_pred CCCceEEEecC--CCceeEEEeeCChHhHHHHHHHHHHHhhhhhHHHHHH-HhhhcCCCCCCCceEEEEcceeccCCCcc
Q psy4897 320 SENRTLELHSP--DGVHSCILRASDASEASLWFNTLHSTLHVLTLKSIAE-ANKILGPALLGDLQLIGWLARKLGQSDCL 396 (774)
Q Consensus 320 ~r~r~FeL~s~--dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~~~~~~~-~n~~l~~~~~~~~~~mGWl~~~~~~~~~~ 396 (774)
.+.++|.|.-. ...++.++.+++.+++.+|++||..+.....+..... .+..+.+....++..-|||.++...
T Consensus 206 ~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~~~lq~~~p~~~~~el~~~l~~~~~k~G~L~K~g~~---- 281 (386)
T 3lju_X 206 GHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPK---- 281 (386)
T ss_dssp TSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHGGGSSCCCSEEEEEEECCTT----
T ss_pred CCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhcccccccccCCccchhhcccccccccceeeeEEEECCC----
Confidence 37789998632 2347899999999999999999988754332211100 0111122234578899999876422
Q ss_pred ccCCCCCCCCCCCCCCcceeeecchhhhhhhhccCCCCCCCCCCCCCCCCCCccCCCCCCCCCceEEEEEEeccceeEEe
Q psy4897 397 ENGRASSESSGDDSTDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHNGRASSESSGDDSTDRWVSIFGAVTERELRLY 476 (774)
Q Consensus 397 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~l~~~~l~~y 476 (774)
....|+++|++|++..|+.|
T Consensus 282 ------------------------------------------------------------~~k~WKkRwFVL~~~~L~YY 301 (386)
T 3lju_X 282 ------------------------------------------------------------QTEGFRKRWFTMDDRRLMYF 301 (386)
T ss_dssp ------------------------------------------------------------SCSCCEEEEEEEETTEEEEE
T ss_pred ------------------------------------------------------------CCCCCcccEEEEECCEEEEE
Confidence 23689999999999999999
Q ss_pred cCCCCChhcccCcc----cccceeeEeeeccCCCCC--cEEEEEEeCCCCceeeEEEEecChhHHHHHHHHHHHHHH
Q psy4897 477 ESAPWSPEAWSTPA----HVFPLVSTRLVSSSRHSD--VIVFSVRCGTPQGVATHHLRAETHRDLANWARTLVQATH 547 (774)
Q Consensus 477 ~~~p~~~~~~~~~~----~~~~l~~~r~~~~s~~~~--~~~f~~~~~t~~g~~~~~~~~et~~dl~~w~~~l~~~~~ 547 (774)
.++.....-+..++ ..|.+.. .+..+.... .++|.|.++. ++++|+++|..|+..|..+|.+++.
T Consensus 302 k~~~d~~~~G~I~L~~~~~~~~v~~--~~~~~~~~~~~~~~F~I~t~~----rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 302 KDPLDAFARGEVFIGSKESGYTVLH--GFPPSTQGHHWPHGITIVTPD----RKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp SSTTCSBCSEEEECCCGGGTCEEEE--SCCTTCCSCCSCEEEEEECSS----CEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ecCCCcccceEEEeecceeeeeecc--cCCccccccCCCcEEEEEeCC----eEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 99875543333333 2222211 011111122 4999999874 6999999999999999999999874
No 303
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.97 E-value=1.7e-09 Score=97.33 Aligned_cols=74 Identities=19% Similarity=0.297 Sum_probs=64.7
Q ss_pred EEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh---cCceEEEEe
Q psy4897 26 YKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR---AGKVVELEV 102 (774)
Q Consensus 26 l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~---ag~~V~L~V 102 (774)
+.+....++||.+... +.+.+|..|.+||||+++| |++||+|++|||++|...++++++..+++ +++.|.|.|
T Consensus 22 ~l~~~~~g~G~~l~~~---~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV 97 (101)
T 3qik_A 22 LILPQEEDYGFDIEEK---NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLV 97 (101)
T ss_dssp EECCCSSSSSEEEEEE---TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEeCCCcccEEEEcc---CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEE
Confidence 4456678999999853 4578999999999999998 99999999999999988889999999987 588999988
Q ss_pred e
Q psy4897 103 G 103 (774)
Q Consensus 103 ~ 103 (774)
.
T Consensus 98 ~ 98 (101)
T 3qik_A 98 A 98 (101)
T ss_dssp E
T ss_pred e
Confidence 5
No 304
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=9.7e-10 Score=98.35 Aligned_cols=86 Identities=40% Similarity=0.584 Sum_probs=71.6
Q ss_pred ceEEEEEecc-CCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 174 QKRIIRVKKS-ENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~-~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
+.+.+.+.+. ...+|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++. ++.+
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v 85 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG-SKKL 85 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS-SSSC
T ss_pred ccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC-CCeE
Confidence 4667777664 4678999999876666789999999999999998 99999999999999999998777766654 4688
Q ss_pred EEEEEEecc
Q psy4897 253 ELEVKYLRE 261 (774)
Q Consensus 253 ~L~V~R~~~ 261 (774)
.|+|.|..+
T Consensus 86 ~l~v~R~g~ 94 (101)
T 1uez_A 86 VLSVYSAGR 94 (101)
T ss_dssp CEEECCCCC
T ss_pred EEEEEECCc
Confidence 899987654
No 305
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=2e-09 Score=96.30 Aligned_cols=82 Identities=18% Similarity=0.273 Sum_probs=70.5
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcce
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLV 252 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V 252 (774)
.+...+.+.+. ..++||.+.+. .+++|..|.+++||+++| |++||+|++|||+++.++++.+++++++..++.+
T Consensus 14 ~~~~~v~l~~~-~~g~G~~~~~~----~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 87 (100)
T 1whd_A 14 GEKLQITIRRG-KDGFGFTICCD----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEI 87 (100)
T ss_dssp CEEEEEEEECC-SSSSSCBCCCS----SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEE
T ss_pred cceEEEEEECC-CCeeeEEEeCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 34566777764 57899988763 579999999999999998 9999999999999999999999999999877789
Q ss_pred EEEEEEec
Q psy4897 253 ELEVKYLR 260 (774)
Q Consensus 253 ~L~V~R~~ 260 (774)
.|+|.|..
T Consensus 88 ~l~v~R~~ 95 (100)
T 1whd_A 88 ILLVWRVS 95 (100)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 99998754
No 306
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.96 E-value=1.5e-09 Score=101.29 Aligned_cols=85 Identities=25% Similarity=0.452 Sum_probs=71.8
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcce
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLV 252 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V 252 (774)
.+.+.+.+ ..+|||.+.++. ..+++|..|.+++||+++| |++||+|++|||++|.++++++++.+|++ .++.+
T Consensus 30 ~~~~~~~~--~~~lG~~l~~~~--~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v 104 (124)
T 3tsv_A 30 MKLVKFRK--GDSVGLRLAGGN--DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 104 (124)
T ss_dssp CEEEEEEC--SSCCCEEEEECT--TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEE
T ss_pred eEEEEcCC--CCceeEEEecCC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 44444444 578999998753 3689999999999999998 99999999999999999999999998885 78899
Q ss_pred EEEEEEeccccc
Q psy4897 253 ELEVKYLREVTP 264 (774)
Q Consensus 253 ~L~V~R~~~~~~ 264 (774)
.|+|.|.++...
T Consensus 105 ~l~v~R~~~~~~ 116 (124)
T 3tsv_A 105 TILAQKKKDVYR 116 (124)
T ss_dssp EEEEEECHHHHH
T ss_pred EEEEEECCchhh
Confidence 999998776543
No 307
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.95 E-value=2.3e-10 Score=102.94 Aligned_cols=77 Identities=26% Similarity=0.418 Sum_probs=69.4
Q ss_pred CCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEecc
Q psy4897 184 ENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 184 ~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
....|||.+.++.+...+++|..|.+++||+++| |++||+|++|||+++.+++++++.++|+..++.+.|+|.|..+
T Consensus 13 ~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 13 GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET 89 (103)
T ss_dssp SSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCTT
T ss_pred CCCCcCEEEeccccCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCe
Confidence 4578999998876655689999999999999998 9999999999999999999999999999888999999988654
No 308
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=3.9e-10 Score=105.36 Aligned_cols=86 Identities=22% Similarity=0.365 Sum_probs=72.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCC----------------------------CCCCCeEEEEecCCChhhhccCCCCCCEE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGK----------------------------ENKMPILISKIFKGMAADQTEQLYVGDAI 225 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~----------------------------~~~~pi~Is~V~pgspA~~aG~L~~GD~I 225 (774)
.+|+|.|.+. ..+|||++.+.. +...+++|..|.+++||+++| |++||+|
T Consensus 8 ~~r~v~l~r~-~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 8 GPKTVTLKRT-SQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp SCCCEEEECC-SSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CCEEEEEEEC-CCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 4667888875 468999997510 012569999999999999998 9999999
Q ss_pred EEECCeecCCCCHHHHHHHHHHcCcceEEEEEEecc
Q psy4897 226 LSVNGEDLREATHDEAVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 226 laVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
++|||++|.++++++++++|+..+..+.|+|.|..+
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 999999999889999999999989999999987654
No 309
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=5.6e-09 Score=95.92 Aligned_cols=86 Identities=34% Similarity=0.465 Sum_probs=74.0
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceE
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVE 253 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~ 253 (774)
+.+.|.+.+. ..++||.+.++. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++..++.+.
T Consensus 19 ~~~~v~l~~~-~~~lG~~~~~~~--~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~ 94 (117)
T 1uit_A 19 EPRHVKVQKG-SEPLGISIVSGE--KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDTIT 94 (117)
T ss_dssp CCEEEEEECS-SCCCCEEEEECT--TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEE
T ss_pred CCEEEEEEeC-CCCccEEEEccC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4677888875 478999998764 3589999999999999998 99999999999999999998888877777889999
Q ss_pred EEEEEecccc
Q psy4897 254 LEVKYLREVT 263 (774)
Q Consensus 254 L~V~R~~~~~ 263 (774)
|+|.|.++..
T Consensus 95 l~v~r~~~~~ 104 (117)
T 1uit_A 95 ILAQYNPHVH 104 (117)
T ss_dssp EEECCCSCCC
T ss_pred EEEEECCchh
Confidence 9998876544
No 310
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.94 E-value=6.2e-09 Score=94.73 Aligned_cols=85 Identities=32% Similarity=0.413 Sum_probs=73.3
Q ss_pred EEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCC-CCCCEEEEECCeecCCCCHHHHHHHHHH-cCcceE
Q psy4897 176 RIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQL-YVGDAILSVNGEDLREATHDEAVKALKR-AGKLVE 253 (774)
Q Consensus 176 r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L-~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~V~ 253 (774)
..+.+.+....++||.+.+..+ ..+++|..|.+++||+++| | ++||+|++|||+++.+++++++.++++. .++.+.
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~~-~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 80 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERVS-KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV 80 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECSS-SSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEE
T ss_pred EEEEEEcCCCCceeEEEEecCC-CCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEE
Confidence 4577777667889999987532 4689999999999999998 7 9999999999999999999999999987 568999
Q ss_pred EEEEEeccc
Q psy4897 254 LEVKYLREV 262 (774)
Q Consensus 254 L~V~R~~~~ 262 (774)
|+|.|.++.
T Consensus 81 l~v~R~g~~ 89 (112)
T 1qau_A 81 VLILRGPEG 89 (112)
T ss_dssp EEEEECCTT
T ss_pred EEEEeCCcc
Confidence 999987653
No 311
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.94 E-value=1.8e-09 Score=100.05 Aligned_cols=86 Identities=17% Similarity=0.232 Sum_probs=69.4
Q ss_pred CcEEEEEEee---cCCcccEEEEccC---CCCCCeEEEEecC--CCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy4897 20 DFYSENYKYT---ENNGLGISIKGGK---ENKMPILISKIFK--GMAADQTEQLYVGDAILSVNGEDLREATHDEAVKAL 91 (774)
Q Consensus 20 ~~~~V~l~rk---~~~gLGfsI~GG~---e~~~gi~Vs~V~p--GSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lL 91 (774)
-.++|++..- ..+.+||.|.... +...+++|..|.+ ++||+++| |++||+|++|||++|.++++.++..++
T Consensus 12 ~~~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l 90 (118)
T 2yub_A 12 LPYSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAI 90 (118)
T ss_dssp SCCEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHH
T ss_pred CCceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 3466777663 3355666665221 2346899999999 99999998 999999999999999999999999999
Q ss_pred HhcCceEEEEeeecc
Q psy4897 92 KRAGKVVELEVGVGY 106 (774)
Q Consensus 92 k~ag~~V~L~V~R~~ 106 (774)
+..++.+.|+|.|+.
T Consensus 91 ~~~g~~v~l~v~R~g 105 (118)
T 2yub_A 91 KQTSQTLQLLIEHDP 105 (118)
T ss_dssp HCCSSCEEEEEEECS
T ss_pred HhCCCEEEEEEEECC
Confidence 987888999998865
No 312
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=1.5e-09 Score=101.03 Aligned_cols=88 Identities=20% Similarity=0.298 Sum_probs=70.4
Q ss_pred CCCCcEEEEEEeecC-CcccEEEEccCCC--CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh
Q psy4897 17 SSRDFYSENYKYTEN-NGLGISIKGGKEN--KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR 93 (774)
Q Consensus 17 ~s~~~~~V~l~rk~~-~gLGfsI~GG~e~--~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ 93 (774)
...++..+.+.+... .+|||++....+. ..+++|..|.+++||+++|+|++||+|++|||++|.+ +.++..+|+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~ 93 (124)
T 1wh1_A 16 EELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTS 93 (124)
T ss_dssp SSCEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTC
T ss_pred CcceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHh
Confidence 344455556655544 5899999876432 3689999999999999997799999999999999985 6788888887
Q ss_pred c-CceEEEEeeecc
Q psy4897 94 A-GKVVELEVGVGY 106 (774)
Q Consensus 94 a-g~~V~L~V~R~~ 106 (774)
. +..|.|+|.|+.
T Consensus 94 ~~g~~v~l~v~R~g 107 (124)
T 1wh1_A 94 EENKNFSLLIARPE 107 (124)
T ss_dssp SSCCSCCEEEEECS
T ss_pred CCCCEEEEEEEECC
Confidence 4 788999998875
No 313
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=3e-09 Score=99.83 Aligned_cols=82 Identities=22% Similarity=0.249 Sum_probs=70.9
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKL 251 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~ 251 (774)
....+.+.+. ..+|||.+.+. ..+++|..|.+++||+++|.|++||+|++|||++|.+.++++++++|+. .+..
T Consensus 27 ~~~~~~l~k~-~~glG~~i~~~---~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~ 102 (126)
T 1wif_A 27 KVIQTKLTVG-NLGLGLVVIQN---GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTV 102 (126)
T ss_dssp CEEEEEEECC-TTCCCCCEEEE---TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCE
T ss_pred ceEEEEEecC-CceEeEEEEcC---CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCE
Confidence 4556667764 67899988763 4578999999999999998899999999999999998889999999997 5789
Q ss_pred eEEEEEEe
Q psy4897 252 VELEVKYL 259 (774)
Q Consensus 252 V~L~V~R~ 259 (774)
|+|+|.|.
T Consensus 103 v~l~V~R~ 110 (126)
T 1wif_A 103 LQIKAYRG 110 (126)
T ss_dssp EEEEEESS
T ss_pred EEEEEEEC
Confidence 99999876
No 314
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.92 E-value=1.8e-09 Score=110.45 Aligned_cols=86 Identities=22% Similarity=0.234 Sum_probs=73.4
Q ss_pred CCCcEEEEEEeecCCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCce
Q psy4897 18 SRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKV 97 (774)
Q Consensus 18 s~~~~~V~l~rk~~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~ 97 (774)
....+.|.+.+ ...||||.|.++.+ ..|++|..|.+|+||+++| |++||+|++|||++|.++++.+++.+++..+..
T Consensus 7 ~~~~r~v~l~k-~~~glG~~l~~~~~-~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~ 83 (216)
T 2krg_A 7 MLRPRLCTMKK-GPSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (216)
T ss_dssp TCCCEEEEEEC-CSSSSCEEECCCSS-SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSE
T ss_pred ccceEEEEEEe-CCCCceEEEEecCC-CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCe
Confidence 34566777754 45689999987653 3489999999999999998 999999999999999999999999999988888
Q ss_pred E-EEEeeecc
Q psy4897 98 V-ELEVGVGY 106 (774)
Q Consensus 98 V-~L~V~R~~ 106 (774)
| .|+|.|++
T Consensus 84 v~~l~V~R~g 93 (216)
T 2krg_A 84 TKLLVVDRET 93 (216)
T ss_dssp EEEEECCHHH
T ss_pred EEEEEEEECC
Confidence 8 88887765
No 315
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=7.6e-09 Score=92.08 Aligned_cols=83 Identities=20% Similarity=0.300 Sum_probs=69.1
Q ss_pred cceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCc
Q psy4897 173 NQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGK 250 (774)
Q Consensus 173 ~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~ 250 (774)
.+.+.+.+.+. ..+|||.+... ..+++|..|.++ |+++| |++||+|++|||++|.+++|++++++|+. .++
T Consensus 9 ~~~~~v~l~~~-~~g~G~~i~~~---~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 81 (96)
T 1ujv_A 9 AELMTLTIVKG-AQGFGFTIADS---PTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGS 81 (96)
T ss_dssp CCCEEEEEECC-SSSSSEEEEEE---TTEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTS
T ss_pred ceEEEEEEEeC-CCceeEEEEcC---CCCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCC
Confidence 34677888875 58999999753 346899999983 66776 99999999999999999999999999998 378
Q ss_pred ceEEEEEEeccc
Q psy4897 251 LVELEVKYLREV 262 (774)
Q Consensus 251 ~V~L~V~R~~~~ 262 (774)
.+.|+|.|....
T Consensus 82 ~v~l~v~R~g~~ 93 (96)
T 1ujv_A 82 ETSLIIHRGSGP 93 (96)
T ss_dssp EEEEEEECCSSC
T ss_pred EEEEEEEECCCC
Confidence 999999987553
No 316
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=3.2e-09 Score=97.88 Aligned_cols=88 Identities=19% Similarity=0.256 Sum_probs=72.9
Q ss_pred cceEEEEEeccCCC--CcceEEeCCCCC-CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcC
Q psy4897 173 NQKRIIRVKKSENN--GLGISIKGGKEN-KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG 249 (774)
Q Consensus 173 ~~~r~V~L~k~~~~--~LGfsi~gg~~~-~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g 249 (774)
...+.+.+.+.... ++||++.+..+. ..+++|..|.+++||+++| |++||+|++|||+++.++++.++.++++.
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~-- 90 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ-- 90 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS--
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC--
Confidence 35788888887553 799999864322 2579999999999999998 99999999999999999999999999875
Q ss_pred cceEEEEEEecccc
Q psy4897 250 KLVELEVKYLREVT 263 (774)
Q Consensus 250 ~~V~L~V~R~~~~~ 263 (774)
..+.|+|.|.+...
T Consensus 91 ~~v~l~v~R~p~~~ 104 (114)
T 2d8i_A 91 PSLGLLVRTYPELE 104 (114)
T ss_dssp SEEEEEEEECCCSC
T ss_pred CcEEEEEEECCCCC
Confidence 38899998866543
No 317
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.91 E-value=4.3e-09 Score=100.23 Aligned_cols=87 Identities=32% Similarity=0.451 Sum_probs=72.8
Q ss_pred ceEEEEEeccC---CCCcceEEeCCCC------------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCH
Q psy4897 174 QKRIIRVKKSE---NNGLGISIKGGKE------------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATH 238 (774)
Q Consensus 174 ~~r~V~L~k~~---~~~LGfsi~gg~~------------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~ 238 (774)
..+.+.+.+.. ...+||.+.++.+ ...+++|..|.+++||+++| |++||+|++|||+++.++++
T Consensus 23 ~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~ 101 (139)
T 2vz5_A 23 MVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTH 101 (139)
T ss_dssp EEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred ceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCH
Confidence 45677776643 3479999987543 24689999999999999998 99999999999999999899
Q ss_pred HHHHHHHHH-cCcceEEEEEEecc
Q psy4897 239 DEAVKALKR-AGKLVELEVKYLRE 261 (774)
Q Consensus 239 ~e~v~~Lk~-~g~~V~L~V~R~~~ 261 (774)
.+++.+|+. .++.+.|+|.|.+.
T Consensus 102 ~~~~~~l~~~~g~~v~l~v~R~g~ 125 (139)
T 2vz5_A 102 DQARKRLTKRSEEVVRLLVTRQSL 125 (139)
T ss_dssp HHHHHHHCCTTCSEEEEEEEECC-
T ss_pred HHHHHHHHhCCCCEEEEEEEECCE
Confidence 999999987 67889999998765
No 318
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.90 E-value=6.4e-09 Score=90.80 Aligned_cols=80 Identities=19% Similarity=0.297 Sum_probs=65.2
Q ss_pred EEEEeccC--CCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcce
Q psy4897 177 IIRVKKSE--NNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLV 252 (774)
Q Consensus 177 ~V~L~k~~--~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V 252 (774)
.+.+.+.. ...+||.+... ..+++|..|.+++||+++| |++||+|++|||+++.+.++.++..+++. .++.+
T Consensus 6 ~~~~~~~~~~~~~lG~~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v 81 (90)
T 2eaq_A 6 RISINQTPGKSLDFGFTIKWD---IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHL 81 (90)
T ss_dssp EEEEECCTTCSSCCSEEEEEE---TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEE
T ss_pred EEEEEecCCCCCcccEEEEec---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEE
Confidence 34444433 34799988642 4579999999999999998 99999999999999976679999999985 57899
Q ss_pred EEEEEEec
Q psy4897 253 ELEVKYLR 260 (774)
Q Consensus 253 ~L~V~R~~ 260 (774)
.|+|.|.+
T Consensus 82 ~l~v~R~g 89 (90)
T 2eaq_A 82 VMDVRRYG 89 (90)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCC
Confidence 99998864
No 319
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.88 E-value=5.5e-09 Score=103.98 Aligned_cols=71 Identities=31% Similarity=0.404 Sum_probs=65.5
Q ss_pred CCcceEEeCCCC--------CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEE
Q psy4897 186 NGLGISIKGGKE--------NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVK 257 (774)
Q Consensus 186 ~~LGfsi~gg~~--------~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~ 257 (774)
.+|||++.|+.+ ...+++|..|.+++||++ | |++||+|++|||+++.+++|.+++.+++..+..|.|+|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 579999999753 356899999999999999 7 999999999999999999999999999998889999999
Q ss_pred E
Q psy4897 258 Y 258 (774)
Q Consensus 258 R 258 (774)
|
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 8
No 320
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.88 E-value=1.1e-08 Score=87.04 Aligned_cols=76 Identities=20% Similarity=0.309 Sum_probs=64.5
Q ss_pred EEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEE
Q psy4897 178 IRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVK 257 (774)
Q Consensus 178 V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~ 257 (774)
..+.+.....+||.+. .+++|..|.+++||+++|.|++||+|++|||+++.++++.++.++++..++.+.|+|.
T Consensus 5 ~~~~~~~~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~ 78 (81)
T 2rcz_A 5 TLVKSRKNEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQ 78 (81)
T ss_dssp EEECCSTTCCCCEEEE------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEE
T ss_pred EEEECCCCCCCCEEEe------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEE
Confidence 3455555678998875 3589999999999999977999999999999999988899999999987778888887
Q ss_pred Ee
Q psy4897 258 YL 259 (774)
Q Consensus 258 R~ 259 (774)
|.
T Consensus 79 R~ 80 (81)
T 2rcz_A 79 RD 80 (81)
T ss_dssp C-
T ss_pred eC
Confidence 64
No 321
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.88 E-value=7.6e-09 Score=96.40 Aligned_cols=86 Identities=23% Similarity=0.325 Sum_probs=73.4
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc-Ccce
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA-GKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~-g~~V 252 (774)
.++.+.+.+. ..++||.+.++.+ ..+++|..|.+++||+++| |++||+|++|||+++.++++.++..+|+.. +..+
T Consensus 9 ~~r~v~l~~~-~~g~G~~l~~~~~-~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 85 (128)
T 2kjd_A 9 RPRLCTMKKG-PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (128)
T ss_dssp CCEEEEEECC-SSSCCEEEEECSS-SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEE
T ss_pred CcEEEEEecC-CCcccEEEEecCC-CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEE
Confidence 5788888885 4789999987643 3489999999999999998 999999999999999999999999999884 5667
Q ss_pred EEEEEEeccc
Q psy4897 253 ELEVKYLREV 262 (774)
Q Consensus 253 ~L~V~R~~~~ 262 (774)
.|+|.|.+..
T Consensus 86 ~l~v~R~g~~ 95 (128)
T 2kjd_A 86 LLVVDRETDE 95 (128)
T ss_dssp EEEECHHHHH
T ss_pred EEEEEeCCcc
Confidence 7888876543
No 322
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.86 E-value=8.9e-09 Score=102.95 Aligned_cols=89 Identities=25% Similarity=0.369 Sum_probs=77.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCC----CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc-
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKE----NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA- 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~----~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~- 248 (774)
+.+.+.+.+....+|||.+.++.+ ...+++|..|.+++||+++|.|++||+|++|||+++.++++.++..+|+..
T Consensus 6 ~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 85 (196)
T 1p1d_A 6 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 85 (196)
T ss_dssp EEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC
T ss_pred EEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 467788888777999999998743 246799999999999999977999999999999999988899999999985
Q ss_pred -CcceEEEEEEeccc
Q psy4897 249 -GKLVELEVKYLREV 262 (774)
Q Consensus 249 -g~~V~L~V~R~~~~ 262 (774)
+..+.|+|.|.+..
T Consensus 86 ~g~~v~l~v~R~~~~ 100 (196)
T 1p1d_A 86 ITSKVTLEIEFDVAE 100 (196)
T ss_dssp SSSEEEEEEEECSCS
T ss_pred CCCeEEEEEEecCCC
Confidence 78999999887653
No 323
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.84 E-value=3.8e-09 Score=96.78 Aligned_cols=81 Identities=30% Similarity=0.372 Sum_probs=68.4
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcC-cce
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAG-KLV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g-~~V 252 (774)
.+|.+.+.+ ...++||.+.+. .+++|..|.+++||+++| |++||+|++|||++|..+++++++++|+..+ ..+
T Consensus 15 ~~r~v~l~~-~~~~~G~~l~~~----~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v 88 (111)
T 1vae_A 15 PPRGIHFTV-EEGDLGFTLRGN----TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEV 88 (111)
T ss_dssp CCCCCCEEC-CSSCCSCCEESS----SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEE
T ss_pred CCeEEEEEc-CCCcccEEEeCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceE
Confidence 356677777 468899988763 578999999999999998 9999999999999999888999999999854 468
Q ss_pred EEEEEEec
Q psy4897 253 ELEVKYLR 260 (774)
Q Consensus 253 ~L~V~R~~ 260 (774)
.|+|.+..
T Consensus 89 ~l~V~~~~ 96 (111)
T 1vae_A 89 EMKVVSLL 96 (111)
T ss_dssp CEEEECEE
T ss_pred EEEEEecC
Confidence 99887643
No 324
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.84 E-value=1.6e-08 Score=88.43 Aligned_cols=74 Identities=18% Similarity=0.309 Sum_probs=62.5
Q ss_pred ccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEecc
Q psy4897 182 KSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 182 k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
......+||.+. .+++|..|.+++||+++|.|++||+|++|||+++.++++.++.++++..++.+.|+|.|.+.
T Consensus 11 ~~~~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~ 84 (92)
T 3cyy_A 11 SAKNEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDER 84 (92)
T ss_dssp SSTTSCCCEEEE------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC---
T ss_pred CCCCCCCCEEEe------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 334568898875 36999999999999999779999999999999999888999999999877789999987654
No 325
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.81 E-value=7e-09 Score=96.66 Aligned_cols=87 Identities=31% Similarity=0.400 Sum_probs=75.1
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCC-CCCCEEEEECCeecCCCCHHHHHHHHHH-cCcc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQL-YVGDAILSVNGEDLREATHDEAVKALKR-AGKL 251 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L-~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~ 251 (774)
..+.+.+.+....++||.+.+..+ ..+++|..|.+++||+++| | ++||+|++|||+++.+++++++.++|+. .++.
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~-~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~ 85 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVS-KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASET 85 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTT-SSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSC
T ss_pred ceEEEEEEeCCCCcEeEEEEecCC-CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 467788888666899999987532 4689999999999999998 7 9999999999999999999999999987 5689
Q ss_pred eEEEEEEeccc
Q psy4897 252 VELEVKYLREV 262 (774)
Q Consensus 252 V~L~V~R~~~~ 262 (774)
+.|+|.|.++.
T Consensus 86 v~l~v~R~g~~ 96 (127)
T 1b8q_A 86 HVVLILRGPEG 96 (127)
T ss_dssp EEEEEECCCCS
T ss_pred EEEEEEeCCce
Confidence 99999987653
No 326
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.81 E-value=2e-08 Score=93.01 Aligned_cols=88 Identities=16% Similarity=0.248 Sum_probs=70.0
Q ss_pred ceEEEEEeccCCCCcceEEeCCC---CCCCCeEEEEecC--CChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGK---ENKMPILISKIFK--GMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA 248 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~---~~~~pi~Is~V~p--gspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~ 248 (774)
..+.+.+.+...+.+||.+.... +...+++|..|.+ ++||+++| |++||+|++|||++|.+++++++..+|+..
T Consensus 15 ~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~ 93 (118)
T 2yub_A 15 SVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQT 93 (118)
T ss_dssp EEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCC
T ss_pred eeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhC
Confidence 34555555554556677665321 2246899999999 99999998 999999999999999998889999999877
Q ss_pred CcceEEEEEEeccc
Q psy4897 249 GKLVELEVKYLREV 262 (774)
Q Consensus 249 g~~V~L~V~R~~~~ 262 (774)
++.+.|+|.|.+..
T Consensus 94 g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 94 SQTLQLLIEHDPVP 107 (118)
T ss_dssp SSCEEEEEEECSSC
T ss_pred CCEEEEEEEECCEE
Confidence 78999999887653
No 327
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.77 E-value=1.6e-08 Score=114.18 Aligned_cols=85 Identities=25% Similarity=0.452 Sum_probs=75.7
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcce
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLV 252 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V 252 (774)
+|+|.+.+ ..+|||.+.++. ..|++|.+|.+||||+++| |++||+|++|||++|.++++++++.+|+. .+..|
T Consensus 2 ~r~V~l~k--~~~lG~~i~gg~--~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v 76 (468)
T 3shw_A 2 MKLVKFRK--GDSVGLRLAGGN--DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 76 (468)
T ss_dssp EEEEEEEC--CSSCCEEEEEET--TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred ceEEEEec--CCccceEEEccC--cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 57788887 378999998874 3689999999999999998 99999999999999999999999999998 78999
Q ss_pred EEEEEEeccccc
Q psy4897 253 ELEVKYLREVTP 264 (774)
Q Consensus 253 ~L~V~R~~~~~~ 264 (774)
+|+|.|.++...
T Consensus 77 ~L~V~r~g~~~~ 88 (468)
T 3shw_A 77 TILAQKKKDVYR 88 (468)
T ss_dssp EEEEEECHHHHH
T ss_pred EEEEEECCccch
Confidence 999999776443
No 328
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.76 E-value=2.4e-08 Score=89.85 Aligned_cols=78 Identities=18% Similarity=0.288 Sum_probs=65.9
Q ss_pred eEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH---cCcc
Q psy4897 175 KRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR---AGKL 251 (774)
Q Consensus 175 ~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~---~g~~ 251 (774)
...+.+.+ ...++||.+... ..+++|..|.++|||+++| |++||+|++|||++|...++++++..++. +++.
T Consensus 18 ~~~l~l~~-~~~g~G~~l~~~---~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~ 92 (101)
T 3qik_A 18 AKRLLILP-QEEDYGFDIEEK---NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRP 92 (101)
T ss_dssp EEEEEECC-CSSSSSEEEEEE---TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCC
T ss_pred cCeEEEEe-CCCcccEEEEcc---CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCe
Confidence 34455555 467899998753 4568999999999999998 99999999999999987789999999986 6899
Q ss_pred eEEEEE
Q psy4897 252 VELEVK 257 (774)
Q Consensus 252 V~L~V~ 257 (774)
+.|+|.
T Consensus 93 v~LLV~ 98 (101)
T 3qik_A 93 LRLLVA 98 (101)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999886
No 329
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.76 E-value=4.7e-08 Score=87.90 Aligned_cols=82 Identities=15% Similarity=0.271 Sum_probs=63.0
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCC-CCcEEEEEEeCCCCceeeEEEEecChhHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRH-SDVIVFSVRCGTPQGVATHHLRAETHRDLA 536 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~-~~~~~f~~~~~t~~g~~~~~~~~et~~dl~ 536 (774)
...|+++||+|++..|++|.++.... |....+|-...++...+. ...++|.|.+. +-++|+|++||..|+.
T Consensus 21 ~~~Wk~RwfvL~~~~L~yyk~~~~~~-----~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~---~~~~~~~~a~s~~e~~ 92 (109)
T 1wgq_A 21 KKPWKHLWFVIKNKVLYTYAASEDVA-----ALESQPLLGFTVTLVKDENSESKVFQLLHK---GMVFYVFKADDAHSTQ 92 (109)
T ss_dssp TSCCEEEEEEEETTEEEEESCTTCSS-----CSEEEECSSEEEEECCCSSCSSSEEEEEET---TEEEEEEECSSHHHHH
T ss_pred CCCceeEEEEEeCCEEEEECCCCcCc-----cCceEECCCCEEEECCCCCCCCcEEEEEeC---CCeEEEEECCCHHHHH
Confidence 46899999999999999999887543 455555544444433222 23499999976 3378999999999999
Q ss_pred HHHHHHHHHHH
Q psy4897 537 NWARTLVQATH 547 (774)
Q Consensus 537 ~w~~~l~~~~~ 547 (774)
.|..+|..++.
T Consensus 93 ~Wi~al~~a~~ 103 (109)
T 1wgq_A 93 RWIDAFQEGTV 103 (109)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhc
Confidence 99999998874
No 330
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.73 E-value=5.4e-08 Score=91.61 Aligned_cols=85 Identities=15% Similarity=0.216 Sum_probs=62.7
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCc----------------
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQG---------------- 521 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g---------------- 521 (774)
...|+++||||++..||+|.+.... .|....+|-...++......+.+||.|.++..+.
T Consensus 20 ~k~WkrRWfVLk~~~L~yyk~~~~~-----~p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~ 94 (130)
T 1v88_A 20 LKSWTKLWCVLKPGVLLIYKTQKNG-----QWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSIT 94 (130)
T ss_dssp SSSCEEEEEEEETTEEEEESCSSSC-----CCCEEEECSSCEECCCCTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCC
T ss_pred CCCceEEEEEEECCEEEEECCCCCC-----CceEEEEcCCCEEEECCCCCCCeEEEEEcCCccccccccCCccccccccc
Confidence 4679999999999999999998754 4455555544444332233445999999875432
Q ss_pred ----eeeEEEEecChhHHHHHHHHHHHHHH
Q psy4897 522 ----VATHHLRAETHRDLANWARTLVQATH 547 (774)
Q Consensus 522 ----~~~~~~~~et~~dl~~w~~~l~~~~~ 547 (774)
-..|+|++||..|+..|.++|..++.
T Consensus 95 ~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 95 QPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp SCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred ccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 12488999999999999999998864
No 331
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=4.1e-08 Score=91.30 Aligned_cols=84 Identities=21% Similarity=0.317 Sum_probs=67.5
Q ss_pred EEEEeccC-CCCcceEEeCCCC--CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH-cCcce
Q psy4897 177 IIRVKKSE-NNGLGISIKGGKE--NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-AGKLV 252 (774)
Q Consensus 177 ~V~L~k~~-~~~LGfsi~gg~~--~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~V 252 (774)
.+.+.+.. ...+||.+..... ...+++|..|.+++||+++|+|++||+|++|||++|.+ +.++..+|+. .+..+
T Consensus 22 ~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v 99 (124)
T 1wh1_A 22 EVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEENKNF 99 (124)
T ss_dssp CBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSSCCSC
T ss_pred EEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCEE
Confidence 34444432 3579999986532 13689999999999999997799999999999999986 8999999987 57899
Q ss_pred EEEEEEeccc
Q psy4897 253 ELEVKYLREV 262 (774)
Q Consensus 253 ~L~V~R~~~~ 262 (774)
.|+|.|.+..
T Consensus 100 ~l~v~R~g~~ 109 (124)
T 1wh1_A 100 SLLIARPELQ 109 (124)
T ss_dssp CEEEEECSSC
T ss_pred EEEEEECCEE
Confidence 9999987653
No 332
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=98.73 E-value=5.8e-08 Score=89.47 Aligned_cols=93 Identities=14% Similarity=0.281 Sum_probs=68.8
Q ss_pred CCceEEEEEEecc-ceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHH
Q psy4897 458 TDRWVSIFGAVTE-RELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLA 536 (774)
Q Consensus 458 ~~~w~~~~~~l~~-~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~ 536 (774)
...|+++||+|++ ..|+.|.+.+.....+..|+..+.+....++. ......+||.|.+......++++|.++|..|+.
T Consensus 21 ~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~-~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~ 99 (125)
T 1unq_A 21 IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMK-TERPRPNTFIIRCLQWTTVIERTFHVETPEERE 99 (125)
T ss_dssp SCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEE-ECSSSTTEEEEEEEETTEEEEEEEECSSHHHHH
T ss_pred ccCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecc-cccCCCCEEEEEecCCCCceeEEEEeCCHHHHH
Confidence 4679999999995 69999999987766666666655443322221 123445999999743224579999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy4897 537 NWARTLVQATHSCVL 551 (774)
Q Consensus 537 ~w~~~l~~~~~~~~~ 551 (774)
.|..+|.+++...-.
T Consensus 100 ~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 100 EWTTAIQTVADGLKK 114 (125)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccc
Confidence 999999999876544
No 333
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.73 E-value=2.7e-08 Score=110.38 Aligned_cols=88 Identities=24% Similarity=0.435 Sum_probs=76.3
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcc
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKL 251 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~ 251 (774)
..+.+.+.+. .++||.+.++. ..+++|..|.+||||+++| |++||+|++|||+++.++++++++.+|+. .|..
T Consensus 9 ~~~~v~~~k~--~~lG~~i~gg~--~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~ 83 (391)
T 3tsz_A 9 SMKLVKFRKG--DSVGLRLAGGN--DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEE 83 (391)
T ss_dssp CEEEEEEECC--SSCCEEEEEET--TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSE
T ss_pred CcEEEEeecC--CceeEEEEecC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCe
Confidence 3677777774 47999998864 3789999999999999998 99999999999999999999999999995 7889
Q ss_pred eEEEEEEeccccccc
Q psy4897 252 VELEVKYLREVTPYF 266 (774)
Q Consensus 252 V~L~V~R~~~~~~~~ 266 (774)
++|+|.|.++....+
T Consensus 84 v~l~v~r~~~~~~~~ 98 (391)
T 3tsz_A 84 VTILAQKKKDVYRRI 98 (391)
T ss_dssp EEEEEEECHHHHGGG
T ss_pred EEEEEeeCCcccccc
Confidence 999999987655433
No 334
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.71 E-value=6.1e-08 Score=86.15 Aligned_cols=83 Identities=11% Similarity=0.203 Sum_probs=62.8
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeecc----CCCCCcEEEEEEeCCCCceeeEEEEecChh
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS----SRHSDVIVFSVRCGTPQGVATHHLRAETHR 533 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~----s~~~~~~~f~~~~~t~~g~~~~~~~~et~~ 533 (774)
...|+++|++|++..|++|.++.. ..|....+|-...++.. ......++|.|.++.. ++++|+++|..
T Consensus 20 ~~~Wk~R~fvL~~~~L~yy~~~~~-----~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~---r~~~l~a~s~~ 91 (108)
T 1u5d_A 20 GSEWQKRWCVVSRGLFYYYANEKS-----KQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDR---RTYEFTATSPA 91 (108)
T ss_dssp CEEEEEEEEEEETTEEEEESSTTC-----SSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSS---CCEEEECSSHH
T ss_pred ccCceeeEEEEeCCEEEEecCCCC-----CCCCEEEEecceEEEeCCccccccCCcceEEEEcCCC---cEEEEECCCHH
Confidence 378999999999999999998874 34555555544443222 1122239999998753 68999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy4897 534 DLANWARTLVQATHS 548 (774)
Q Consensus 534 dl~~w~~~l~~~~~~ 548 (774)
|+..|..+|.+++..
T Consensus 92 e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 92 EARDWVDQISFLLKD 106 (108)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998864
No 335
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.71 E-value=1.1e-07 Score=87.42 Aligned_cols=83 Identities=18% Similarity=0.255 Sum_probs=61.6
Q ss_pred CCceEEEEEEeccc---eeEEecCCCCChhcccCcccccceeeEeeecc-CCCCCcEEEEEEeCCCCceeeEEEEecChh
Q psy4897 458 TDRWVSIFGAVTER---ELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS-SRHSDVIVFSVRCGTPQGVATHHLRAETHR 533 (774)
Q Consensus 458 ~~~w~~~~~~l~~~---~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~-s~~~~~~~f~~~~~t~~g~~~~~~~~et~~ 533 (774)
...|+++||||++. .||+|.+....+.-...|+..|.+.. +.. ......+||.|.++. ++|+|++|+..
T Consensus 20 ~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~~V~~---~~~~~~~~~~~~Fki~~~~----~~y~f~A~s~e 92 (112)
T 2coc_A 20 GETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSV---PDPEERLDSGHVWKLQWAK----QSWYLSASSAE 92 (112)
T ss_dssp SSCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGCEEEC---CCSSSCCSSSEEEEEEETT----EEEEEEESSHH
T ss_pred CCCceEEEEEEECCCccEEEEECCCCccCcceEEEcCCCEEEe---cCcccccCCCCEEEEecCC----eEEEEEcCCHH
Confidence 35699999999996 59999988866555555555553221 112 223345999999652 68999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy4897 534 DLANWARTLVQATH 547 (774)
Q Consensus 534 dl~~w~~~l~~~~~ 547 (774)
++..|.++|..|++
T Consensus 93 ~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 93 LQQQWLETLSTAAH 106 (112)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999874
No 336
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=98.69 E-value=3.9e-08 Score=91.44 Aligned_cols=92 Identities=15% Similarity=0.271 Sum_probs=63.3
Q ss_pred CCceEEEEEEeccceeEEecCCCCChh----cccCcccccceeeEeeeccCC--CCCcEEEEEEeCCCCceeeEEEEecC
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPE----AWSTPAHVFPLVSTRLVSSSR--HSDVIVFSVRCGTPQGVATHHLRAET 531 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~----~~~~~~~~~~l~~~r~~~~s~--~~~~~~f~~~~~t~~g~~~~~~~~et 531 (774)
...|+++||||++..||+|++++.... -...|....+|...++....+ ....++|.|.+... +-.+++|.++|
T Consensus 25 ~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~-~~~~~~~~A~s 103 (124)
T 2w2x_D 25 DQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQ-GDPPVEFATDK 103 (124)
T ss_dssp TTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC---CCCEEEEECC
T ss_pred CCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEEECCCC-CCceEEEEECC
Confidence 467999999999999999998653211 112334444454445443322 33459999998743 23579999999
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q psy4897 532 HRDLANWARTLVQATHSCV 550 (774)
Q Consensus 532 ~~dl~~w~~~l~~~~~~~~ 550 (774)
..|+..|.++|..++..+.
T Consensus 104 ~ee~~~Wi~ai~~a~~~~~ 122 (124)
T 2w2x_D 104 VEELFEWFQSIREITWKID 122 (124)
T ss_dssp CHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999987654
No 337
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=98.69 E-value=1e-07 Score=86.99 Aligned_cols=84 Identities=18% Similarity=0.258 Sum_probs=60.9
Q ss_pred CCCceEEEEEEeccceeEEecCCCCChhcccCcccccceee--Eeeec-cCCCCCcEEEEEEeCCCCceeeEEEEecChh
Q psy4897 457 STDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVS--TRLVS-SSRHSDVIVFSVRCGTPQGVATHHLRAETHR 533 (774)
Q Consensus 457 ~~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~--~r~~~-~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~ 533 (774)
....|+++|++|++..||+|.+.-.. .|....+|.. +..+. ......++||.|++... .+|+|.+++..
T Consensus 16 ~~k~Wk~rwfvL~~~~L~~yk~~~~~-----~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~---~~y~f~A~s~e 87 (112)
T 3cxb_B 16 GKEHWKTCFVVLSNGILYQYPDRTDV-----IPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDR---PCLELSAESEA 87 (112)
T ss_dssp SCCCCEEEEEEEETTEEEEESSSSCC-----SCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTS---CCEEEECSSHH
T ss_pred CCCCceEEEEEEECCEEEEECCCCCC-----CccceEEecCCEEEeeeccCCCCCCeEEEEEcCCC---CEEEEEcCCHH
Confidence 36789999999999999999987543 3444444431 11011 12233459999997643 68999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy4897 534 DLANWARTLVQATHS 548 (774)
Q Consensus 534 dl~~w~~~l~~~~~~ 548 (774)
||..|.++|.+++..
T Consensus 88 e~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 88 EMAEWMQHLCQAVSK 102 (112)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999988754
No 338
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.69 E-value=6.9e-08 Score=93.99 Aligned_cols=82 Identities=23% Similarity=0.366 Sum_probs=70.4
Q ss_pred ceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH-cCcce
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-AGKLV 252 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~V 252 (774)
.+|.+.+.+.....+||.+... ..+++|..|.++|||+++| |++||+|++|||+++.+++++....+++. .+..+
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~---~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v 79 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSI---DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKI 79 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEE---TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEE
T ss_pred CCEEEEEEeCCCCcEeEEEEeC---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEE
Confidence 4788999987778999999763 4679999999999999998 99999999999999999887677788876 55689
Q ss_pred EEEEEEe
Q psy4897 253 ELEVKYL 259 (774)
Q Consensus 253 ~L~V~R~ 259 (774)
.|+|++.
T Consensus 80 ~l~vr~~ 86 (166)
T 1w9e_A 80 TMTIRDR 86 (166)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9999543
No 339
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.68 E-value=2.4e-08 Score=102.12 Aligned_cols=87 Identities=24% Similarity=0.332 Sum_probs=74.5
Q ss_pred ccceEEEEEeccCCCCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcc
Q psy4897 172 ENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKL 251 (774)
Q Consensus 172 ~~~~r~V~L~k~~~~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~ 251 (774)
...++.+.+.+. ..+|||.+.++.+ ..+++|..|.+++||+++| |++||+|++|||++|.++++++++.+|+..+..
T Consensus 7 ~~~~r~v~l~k~-~~glG~~l~~~~~-~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~ 83 (216)
T 2krg_A 7 MLRPRLCTMKKG-PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (216)
T ss_dssp TCCCEEEEEECC-SSSSCEEECCCSS-SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSE
T ss_pred ccceEEEEEEeC-CCCceEEEEecCC-CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCe
Confidence 345788888885 4689999987643 3489999999999999998 999999999999999988899999999887888
Q ss_pred e-EEEEEEecc
Q psy4897 252 V-ELEVKYLRE 261 (774)
Q Consensus 252 V-~L~V~R~~~ 261 (774)
+ .|+|.|.+.
T Consensus 84 v~~l~V~R~g~ 94 (216)
T 2krg_A 84 TKLLVVDRETD 94 (216)
T ss_dssp EEEEECCHHHH
T ss_pred EEEEEEEECCE
Confidence 8 888877654
No 340
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=98.67 E-value=3.4e-08 Score=91.16 Aligned_cols=89 Identities=15% Similarity=0.250 Sum_probs=65.1
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCc---ccccceeeEeeeccCCC-CCcEEEEEEeCCCCceeeEEEEecChh
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTP---AHVFPLVSTRLVSSSRH-SDVIVFSVRCGTPQGVATHHLRAETHR 533 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~---~~~~~l~~~r~~~~s~~-~~~~~f~~~~~t~~g~~~~~~~~et~~ 533 (774)
...|+++|++|++..|++|.++......-..+ ...++|....+...... ..++||.|++... .+|+|.+++..
T Consensus 29 ~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~---~~~lfqA~s~~ 105 (122)
T 1dro_A 29 NRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANG---ALFLLQAHDDT 105 (122)
T ss_dssp CCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSS---CEEEEECSSSH
T ss_pred CCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCC---CEEEEECCCHH
Confidence 57899999999999999999987554422222 34566654433222222 3349999997543 78999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy4897 534 DLANWARTLVQATHSC 549 (774)
Q Consensus 534 dl~~w~~~l~~~~~~~ 549 (774)
||..|.++|..++..+
T Consensus 106 e~~~Wi~ai~~~i~~~ 121 (122)
T 1dro_A 106 EMSQWVTSLKAQSDST 121 (122)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999987643
No 341
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.65 E-value=2.1e-07 Score=84.04 Aligned_cols=84 Identities=18% Similarity=0.386 Sum_probs=64.5
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeecc--CCCCCcEEEEEEeCCCCceeeEEEEecChhHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS--SRHSDVIVFSVRCGTPQGVATHHLRAETHRDL 535 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~--s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl 535 (774)
...|+++||+|++..|++|.+... ..|....+|-...++.. ......++|.|.++.. ++++|+++|..|+
T Consensus 18 ~~~Wk~R~fvL~~~~L~yy~~~~~-----~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~---r~~~l~a~s~~e~ 89 (113)
T 1pls_A 18 FNTWKPMWVVLLEDGIEFYKKKSD-----NSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQ---QDHFFQAAFLEER 89 (113)
T ss_dssp SSCCEEEEEEEETTEEEEESSTTC-----SSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTT---EEEEEECSSHHHH
T ss_pred CCCceEEEEEEECCEEEEEeCCCC-----CCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCC---CEEEEECCCHHHH
Confidence 467999999999999999998753 34555555555444431 2223348999998753 7999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy4897 536 ANWARTLVQATHSC 549 (774)
Q Consensus 536 ~~w~~~l~~~~~~~ 549 (774)
..|..+|.+++...
T Consensus 90 ~~Wi~ai~~~~~~~ 103 (113)
T 1pls_A 90 DAWVRDINKAIKCI 103 (113)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998654
No 342
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=98.65 E-value=1.2e-07 Score=86.76 Aligned_cols=85 Identities=19% Similarity=0.185 Sum_probs=62.5
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccC---CCCCcEEEEEEeCCCCceeeEEEEecChhH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSS---RHSDVIVFSVRCGTPQGVATHHLRAETHRD 534 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s---~~~~~~~f~~~~~t~~g~~~~~~~~et~~d 534 (774)
...|+++||+|++..|++|.+.... .|....+|-.+.+.... .....++|.|.+... ++++|.++|..|
T Consensus 25 ~~~WkkR~fvL~~~~L~yy~~~~~~-----~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~---r~~~l~a~s~~e 96 (123)
T 1upq_A 25 LRLWKRRWFVLSGHCLFYYKDSREE-----SVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGM---RTYVLAADTLED 96 (123)
T ss_dssp SCCEEEEEEEEETTEEEEESSTTCC-----SCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTS---CCEEEECSSHHH
T ss_pred CCCceeEEEEEeCCEEEEECCCCCc-----ccceEEECCCCEEEECCCCccCCCcEEEEEECCCC---eEEEEECCCHHH
Confidence 4679999999999999999988754 34444444444443322 222349999988643 789999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy4897 535 LANWARTLVQATHSCV 550 (774)
Q Consensus 535 l~~w~~~l~~~~~~~~ 550 (774)
+..|.++|..+++...
T Consensus 97 ~~~Wi~al~~a~~~~~ 112 (123)
T 1upq_A 97 LRGWLRALGRASRAEG 112 (123)
T ss_dssp HHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhccc
Confidence 9999999999987543
No 343
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=1.7e-07 Score=84.91 Aligned_cols=82 Identities=18% Similarity=0.285 Sum_probs=60.6
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeec--c-CCCCCcEEEEEEeCCCCceeeEEEEecChhH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVS--S-SRHSDVIVFSVRCGTPQGVATHHLRAETHRD 534 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~--~-s~~~~~~~f~~~~~t~~g~~~~~~~~et~~d 534 (774)
...|+++||+|++..|++|.+.... .|....+|-...+.. . ......++|.|.+... ++++|+++|..|
T Consensus 25 ~~~Wk~R~fvL~~~~L~yy~~~~~~-----~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~---r~~~l~a~s~~e 96 (117)
T 2d9y_A 25 VKQWNKRWFVLVDRCLFYYKDEKEE-----SILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGV---RTYFFSAESPEE 96 (117)
T ss_dssp SSCEEEEEEEEETTEEEEESSTTCC-----SCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSS---CEEEEECSSHHH
T ss_pred CCCceEEEEEECCCEEEEECCCCCC-----CcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCC---cEEEEEcCCHHH
Confidence 4679999999999999999987654 444455554433221 1 1223348999986533 789999999999
Q ss_pred HHHHHHHHHHHHH
Q psy4897 535 LANWARTLVQATH 547 (774)
Q Consensus 535 l~~w~~~l~~~~~ 547 (774)
+..|..+|.+++.
T Consensus 97 ~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 97 QEAWIQAMGEAAR 109 (117)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988763
No 344
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.64 E-value=2e-07 Score=85.17 Aligned_cols=82 Identities=18% Similarity=0.280 Sum_probs=60.2
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeec--c-CCCCCcEEEEEEeCCCCceeeEEEEecChhH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVS--S-SRHSDVIVFSVRCGTPQGVATHHLRAETHRD 534 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~--~-s~~~~~~~f~~~~~t~~g~~~~~~~~et~~d 534 (774)
...|+++||+|++..|++|.+..... |....+|-...+.. . ......++|.|.+... ++++|+++|..|
T Consensus 36 ~~~Wk~R~fvL~~~~L~yy~~~~~~~-----~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~---r~~~l~a~s~~e 107 (122)
T 2yry_A 36 VKQWNKRWFVLVDRCLFYYKDEKEES-----ILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGV---RTYFFSAESPEE 107 (122)
T ss_dssp SCCEEEEEEEEETTEEEEESSTTCCS-----CCEEEESTTCCCEECCTTCSCSSSSEEEEECSSS---CEEEEECSSHHH
T ss_pred CCCcEEEEEEEeCCEEEEECCCCCCC-----cccEEEcCCCEEEEcCccccCCcccEEEEecCCC---cEEEEEcCCHHH
Confidence 46799999999999999999887544 44444443322211 1 1223348999986533 789999999999
Q ss_pred HHHHHHHHHHHHH
Q psy4897 535 LANWARTLVQATH 547 (774)
Q Consensus 535 l~~w~~~l~~~~~ 547 (774)
+..|..+|.+++.
T Consensus 108 ~~~Wi~al~~a~~ 120 (122)
T 2yry_A 108 QEAWIQAMGEAAR 120 (122)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988863
No 345
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=98.64 E-value=2.1e-07 Score=85.75 Aligned_cols=82 Identities=13% Similarity=0.159 Sum_probs=61.2
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeec--cC-CCCCcEEEEEEeCCCCceeeEEEEecChhH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVS--SS-RHSDVIVFSVRCGTPQGVATHHLRAETHRD 534 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~--~s-~~~~~~~f~~~~~t~~g~~~~~~~~et~~d 534 (774)
...|+++||+|++..|++|.+..... |....+|-.+.+.. .. .....++|.|.+... ++++|+++|..|
T Consensus 35 ~~~Wk~R~fvL~~~~L~yy~~~~~~~-----~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~---r~~~l~a~s~~e 106 (128)
T 2dkp_A 35 MKLWKKRWFVLSDLCLFYYRDEKEEG-----ILGSILLPSFQIALLTSEDHINRKYAFKAAHPNM---RTYYFCTDTGKE 106 (128)
T ss_dssp SCCEEEEEEEEETTEEEEESSTTCCS-----EEEEECGGGSEEEECCGGGCCSSCSEEEEECSSS---CCEEEECSSHHH
T ss_pred CCCceeEEEEEeCCEEEEECCCCCcc-----cceEEEcCceEEEEcCCcccCCCCeEEEEEcCCC---CEEEEEcCCHHH
Confidence 46799999999999999999887543 44444443333322 11 223459999998743 689999999999
Q ss_pred HHHHHHHHHHHHH
Q psy4897 535 LANWARTLVQATH 547 (774)
Q Consensus 535 l~~w~~~l~~~~~ 547 (774)
+..|..+|.+|+.
T Consensus 107 ~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 107 MELWMKAMLDAAL 119 (128)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998874
No 346
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.63 E-value=2.7e-07 Score=83.44 Aligned_cols=85 Identities=14% Similarity=0.280 Sum_probs=63.1
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeecc--C-CCCCcEEEEEEeCCCC----ceeeEEEEec
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS--S-RHSDVIVFSVRCGTPQ----GVATHHLRAE 530 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~--s-~~~~~~~f~~~~~t~~----g~~~~~~~~e 530 (774)
...|+++||+|++..|++|.+... ..|....+|-...++.. . .....++|.|.+.... .-++++|+++
T Consensus 21 ~~~Wk~R~fvL~~~~L~yy~~~~~-----~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~ 95 (118)
T 1v89_A 21 VKNWQQRYFVLRAQQLYYYKDEED-----TKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMAS 95 (118)
T ss_dssp SSCEEEEEEEEETTEEEEESSSSC-----CSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECS
T ss_pred CCCccEEEEEEECCEEEEEeCCCC-----CCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECC
Confidence 467999999999999999998864 34555566554443321 1 2233599999984211 2378999999
Q ss_pred ChhHHHHHHHHHHHHHH
Q psy4897 531 THRDLANWARTLVQATH 547 (774)
Q Consensus 531 t~~dl~~w~~~l~~~~~ 547 (774)
|..|+..|.++|..++.
T Consensus 96 s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 96 SQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHc
Confidence 99999999999999885
No 347
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=98.63 E-value=2e-07 Score=85.48 Aligned_cols=85 Identities=12% Similarity=0.221 Sum_probs=62.7
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCC-----------------
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQ----------------- 520 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~----------------- 520 (774)
...|+++|++|++..|++|.++... .|....+|-...++...+....+||.|.++...
T Consensus 18 ~~~Wk~R~fvL~~~~L~yy~~~~~~-----~~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~ 92 (127)
T 1fgy_A 18 VKTWKRRWFILTDNCLYYFEYTTDK-----EPRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVE 92 (127)
T ss_dssp SCCEEEEEEEEETTEEEEESSTTCS-----SCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEE
T ss_pred CCCeEEEEEEEECCEEEEeCCCCCC-----CcceEEECCceEEEEccCCCCCceEEEecCCccccccccccccCCcceec
Confidence 4679999999999999999987643 444445554444333233344599999987532
Q ss_pred -ceeeEEEEecChhHHHHHHHHHHHHHH
Q psy4897 521 -GVATHHLRAETHRDLANWARTLVQATH 547 (774)
Q Consensus 521 -g~~~~~~~~et~~dl~~w~~~l~~~~~ 547 (774)
.-++++|+++|..|+..|.++|.+++-
T Consensus 93 ~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 93 GNHVVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 125899999999999999999998874
No 348
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.60 E-value=1.5e-07 Score=88.06 Aligned_cols=83 Identities=12% Similarity=0.160 Sum_probs=59.6
Q ss_pred CCceEEEEEEeccceeEEec----CCCCChhcccCcccccceeeEeeecc-C-CCCCcEEEEEEeCCCCceeeEEEEecC
Q psy4897 458 TDRWVSIFGAVTERELRLYE----SAPWSPEAWSTPAHVFPLVSTRLVSS-S-RHSDVIVFSVRCGTPQGVATHHLRAET 531 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~----~~p~~~~~~~~~~~~~~l~~~r~~~~-s-~~~~~~~f~~~~~t~~g~~~~~~~~et 531 (774)
...|++||+||++..||.|. .-.-+..-...++..|.+ ..+.. + ...++++|.+.+. | ++|+|.+|+
T Consensus 22 ~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~tV---~~~~~~~~~~~~k~~F~~v~~---~-~ty~~~Ads 94 (126)
T 1wi1_A 22 WKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTV---DYTDPQPGLEGGRAFFNAVKE---G-DTVIFASDD 94 (126)
T ss_dssp CCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEE---EECCCCSSCCSCSSEEEEECS---S-CEEEEECSS
T ss_pred ccccceEEEEEeCCEEEEEEcccccccCCCCceEEECCCcEE---EEecCCcccccCceEEEEecC---C-ceEEEEcCC
Confidence 57899999999999999997 444333334444444422 12211 1 2345599998865 3 479999999
Q ss_pred hhHHHHHHHHHHHHHH
Q psy4897 532 HRDLANWARTLVQATH 547 (774)
Q Consensus 532 ~~dl~~w~~~l~~~~~ 547 (774)
..|+..|.++|..|+.
T Consensus 95 eee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 95 EQDRILWVQAMYRATG 110 (126)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999874
No 349
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.60 E-value=1.1e-07 Score=87.49 Aligned_cols=87 Identities=13% Similarity=0.214 Sum_probs=61.3
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcc-cCcccccceeeEeeeccCC-CCCcEEEEEEeCCCCceeeEEEEecChhHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAW-STPAHVFPLVSTRLVSSSR-HSDVIVFSVRCGTPQGVATHHLRAETHRDL 535 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~-~~~~~~~~l~~~r~~~~s~-~~~~~~f~~~~~t~~g~~~~~~~~et~~dl 535 (774)
...|+++|++|++..|++|.+.......- ..+...++|..+.+..... ....+||.|++... ++|+|.+++..|+
T Consensus 29 ~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~---~~~~f~A~s~~e~ 105 (123)
T 1wjm_A 29 NRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDG---KEYLFQAKDEAEM 105 (123)
T ss_dssp CCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSS---CEEEEECSSHHHH
T ss_pred CCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeecccccCCCCEEEEEEcCC---cEEEEECCCHHHH
Confidence 57899999999999999998865322100 1133344454333222222 23349999998753 6899999999999
Q ss_pred HHHHHHHHHHHH
Q psy4897 536 ANWARTLVQATH 547 (774)
Q Consensus 536 ~~w~~~l~~~~~ 547 (774)
..|..+|..++.
T Consensus 106 ~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 106 SSWLRVVNAAIA 117 (123)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998875
No 350
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.59 E-value=9.9e-08 Score=90.86 Aligned_cols=88 Identities=15% Similarity=0.183 Sum_probs=67.0
Q ss_pred CCceEEEEEEeccc-----eeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecCh
Q psy4897 458 TDRWVSIFGAVTER-----ELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETH 532 (774)
Q Consensus 458 ~~~w~~~~~~l~~~-----~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~ 532 (774)
...|+++||+|++. .|++|.+.+.. ..|....+|-...++........+||.|.+... ++|+|++++.
T Consensus 37 ~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~----~~~~g~I~L~~~~~~~~~~~~~~~~F~i~~~~~---r~~~l~A~s~ 109 (150)
T 1wg7_A 37 MRSFKRRFFHLIQLGDGSYNLNFYKDEKIS----KEPKGSIFLDSCMGVVQNNKVRRFAFELKMQDK---SSYLLAADSE 109 (150)
T ss_dssp HSSCEEEEEEEEECSSSCEEEEEESSSCCS----SCCSEEECTTTCCEECCCCSSCTTEEEEECSSS---CEEEEECSSH
T ss_pred ccCeeEEEEEEecCCCCceEEEEECCCCCC----CCcCcEEecccCEEEecCCCCCceEEEEEeCCC---cEEEEEeCCH
Confidence 46899999999997 99999987721 345555555444444332334459999998743 7899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q psy4897 533 RDLANWARTLVQATHSCVLN 552 (774)
Q Consensus 533 ~dl~~w~~~l~~~~~~~~~~ 552 (774)
.|+..|..+|.++++...+.
T Consensus 110 ~e~~~Wi~al~~ai~~~~~~ 129 (150)
T 1wg7_A 110 VEMEEWITILNKILQLNFEA 129 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHH
Confidence 99999999999999877654
No 351
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=98.59 E-value=8.1e-08 Score=89.36 Aligned_cols=89 Identities=13% Similarity=0.175 Sum_probs=62.1
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEee--eccCC---CCCcEEEEEEe--CCC-----------
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRL--VSSSR---HSDVIVFSVRC--GTP----------- 519 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~--~~~s~---~~~~~~f~~~~--~t~----------- 519 (774)
...|+++||+|++..|++|.++.. +.-..|....+|-...+ |...+ ....+||.|.+ +.+
T Consensus 20 ~~~WkrRwfvL~~~~L~yyk~~~d--~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~ 97 (134)
T 2y7b_A 20 FGAWHRRWCVLSGNCISYWTYPDD--EKRKNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQC 97 (134)
T ss_dssp EEEEEEEEEEEETTEEEEESSHHH--HTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEE
T ss_pred CCCcEEEEEEEECCEEEEECCCCc--ccccCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccc
Confidence 468999999999999999986543 11235555555544332 22222 23459999987 221
Q ss_pred ---CceeeEEEEecChhHHHHHHHHHHHHHHH
Q psy4897 520 ---QGVATHHLRAETHRDLANWARTLVQATHS 548 (774)
Q Consensus 520 ---~g~~~~~~~~et~~dl~~w~~~l~~~~~~ 548 (774)
.+.++|+|+++|..|+..|..+|.+++..
T Consensus 98 ~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 98 RDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp ETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 12358999999999999999999988753
No 352
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=98.59 E-value=3.1e-07 Score=82.08 Aligned_cols=81 Identities=17% Similarity=0.267 Sum_probs=59.7
Q ss_pred CCceEEEEEEeccc--eeEEecCCCCChhcccCcccccceeeEeeeccCCC------CCcEEEEEEeCCCCceeeEEEEe
Q psy4897 458 TDRWVSIFGAVTER--ELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRH------SDVIVFSVRCGTPQGVATHHLRA 529 (774)
Q Consensus 458 ~~~w~~~~~~l~~~--~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~------~~~~~f~~~~~t~~g~~~~~~~~ 529 (774)
...|+++|++|++. .|++|.+... ..|....+|-.+.++..... ...++|.|.++.+ .+++|++
T Consensus 20 ~~~Wk~R~fvL~~~~~~L~yyk~~~~-----~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~---~~~~l~a 91 (109)
T 2i5f_A 20 RKNWKVRKFILREDPAYLHYYDPAGA-----EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADE---VHYFLQA 91 (109)
T ss_dssp TCCEEEEEEEEETTTTEEEEECTTSC-----SSCSEEEECTTCEEEEECC--------CCSEEEEECTTC---CEEEEEC
T ss_pred CCCceEEEEEEeCCCcEEEEECCCCC-----CCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCC---CEEEEEc
Confidence 45699999999986 9999987753 34555555544333321111 2349999998854 6799999
Q ss_pred cChhHHHHHHHHHHHHH
Q psy4897 530 ETHRDLANWARTLVQAT 546 (774)
Q Consensus 530 et~~dl~~w~~~l~~~~ 546 (774)
+|..|+..|..+|.+++
T Consensus 92 ~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 92 ATPKERTEWIKAIQMAS 108 (109)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998876
No 353
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=98.59 E-value=1.4e-07 Score=82.62 Aligned_cols=79 Identities=15% Similarity=0.202 Sum_probs=60.4
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLAN 537 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~~ 537 (774)
...|+++|++|++..|+.|.+.... -..|....+|....++. ...+.++|.+.++. ++++|+++|..|+..
T Consensus 14 ~k~WkkR~FvL~~~~L~Yy~~~~~~---~~~~~~~i~l~~~~~~~--~~~~~~~F~i~~~~----r~~~l~A~s~~e~~~ 84 (94)
T 2rsg_A 14 IHGWQDRWVVLKNNALSYYKSEDET---EYGCRGSICLSKAVITP--HDFDECRFDISVND----SVWYLRAQDPDHRQQ 84 (94)
T ss_dssp TTCEEEEEEEEETTEEEEESSTTGG---GTCCSEEEETTTCEEEE--CSSCSSEEEEEETT----EEEEEECCSSCCTHH
T ss_pred CCCceEEEEEEECCEEEEEEecccc---cccceeeEecceeeeec--CcccceeEEEEeCC----eEEEEECCCHHHHHH
Confidence 5679999999999999999886532 23455555555444332 23445899999874 689999999999999
Q ss_pred HHHHHHHH
Q psy4897 538 WARTLVQA 545 (774)
Q Consensus 538 w~~~l~~~ 545 (774)
|..+|.+|
T Consensus 85 Wi~aLq~A 92 (94)
T 2rsg_A 85 WIDAIEQH 92 (94)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99999875
No 354
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.58 E-value=4.1e-07 Score=84.97 Aligned_cols=86 Identities=22% Similarity=0.282 Sum_probs=60.4
Q ss_pred CCceEEEEEEe-ccceeEEecCCCCChhcccCcccccceeeEee------ecc-CCCCCcEEEEEEeCCCCceeeEEEEe
Q psy4897 458 TDRWVSIFGAV-TERELRLYESAPWSPEAWSTPAHVFPLVSTRL------VSS-SRHSDVIVFSVRCGTPQGVATHHLRA 529 (774)
Q Consensus 458 ~~~w~~~~~~l-~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~------~~~-s~~~~~~~f~~~~~t~~g~~~~~~~~ 529 (774)
...|+++|++| ++..|+.|.+..........+. ..++...++ +.. ......++|.|.+... ++|+|.+
T Consensus 21 ~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l-~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~~---r~~~l~A 96 (130)
T 2d9v_A 21 LRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVI-HFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREG---SRLHLCA 96 (130)
T ss_dssp SCCEEEEEEEEETTTEEEEESSSSTTSEEEEEEC-TTTEEEEEEGGGCSSCCCCSSCCTTTEEEEEETTS---CEEEEEC
T ss_pred cCCceeeEEEEccCCEEEEEeCCCCCCcCceEec-ccceeEEeccccccccCCCCCCCcCcEEEEEeCCC---CEEEEEc
Confidence 46899999999 9999999999875433322211 122333232 111 1223349999998643 5899999
Q ss_pred cChhHHHHHHHHHHHHHH
Q psy4897 530 ETHRDLANWARTLVQATH 547 (774)
Q Consensus 530 et~~dl~~w~~~l~~~~~ 547 (774)
||..|+..|..+|..++.
T Consensus 97 ~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 97 ETRDDAIAWKTALMEANS 114 (130)
T ss_dssp SSHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHc
Confidence 999999999999998875
No 355
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=2.9e-07 Score=83.81 Aligned_cols=84 Identities=15% Similarity=0.245 Sum_probs=62.3
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLAN 537 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~~ 537 (774)
...|+++||+|++..|++|.+... .|.....|+...+. . ...+.+||.|.++. ++++|+++|..|+..
T Consensus 24 ~k~WkkR~fvL~~~~L~yyk~~~~------~~~~~i~l~~~~v~-~-~~~~~~~F~I~~~~----r~~~l~a~s~~e~~~ 91 (114)
T 2da0_A 24 RKVWQRRKCSVKNGILTISHATSN------RQPAKLNLLTCQVK-P-NAEDKKSFDLISHN----RTYHFQAEDEQDYVA 91 (114)
T ss_dssp CCCEEEEEEEEETTEEEECCSSCC------SCCEEEETTTSEEE-E-CSSSSSCEEEEETT----EEEEEECSSHHHHHH
T ss_pred CCCceeEEEEEeCCEEEEEcCCCC------CCCCEEEeeeeEEE-E-CCCCCCEEEEEcCC----cEEEEEcCCHHHHHH
Confidence 478999999999999999998543 23333333332222 1 12335899999763 699999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q psy4897 538 WARTLVQATHSCVLNQ 553 (774)
Q Consensus 538 w~~~l~~~~~~~~~~~ 553 (774)
|..+|..++..+.+..
T Consensus 92 Wi~al~~~~~~~~~~~ 107 (114)
T 2da0_A 92 WISVLTNSKEEALTMA 107 (114)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999998876543
No 356
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.57 E-value=7.6e-07 Score=80.28 Aligned_cols=87 Identities=15% Similarity=0.235 Sum_probs=63.6
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceee-EeeeccCC-CCCcEEEEEEeCCCCceeeEEEEecChhHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVS-TRLVSSSR-HSDVIVFSVRCGTPQGVATHHLRAETHRDL 535 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~-~r~~~~s~-~~~~~~f~~~~~t~~g~~~~~~~~et~~dl 535 (774)
...|+++|++|++..|++|.+.... .|....+|-. +.+..... ....++|.|.++. ++++|+++|..|+
T Consensus 21 ~~~Wk~R~fvL~~~~L~yy~~~~~~-----~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~----r~~~l~a~s~~e~ 91 (115)
T 2dn6_A 21 RKNWTERWFVLKPNIISYYVSEDLK-----DKKGDILLDENCCVESLPDKDGKKCLFLVKCFD----KTFEISASDKKKK 91 (115)
T ss_dssp SSCEEEEEEEECSSCEEEESSTTCS-----SEEEEECCCTTCEEEEECCCTTCCSEEEEECSS----CEEEEECSSHHHH
T ss_pred CCCcEEeEEEEECCEEEEeCCCCCc-----ccCcEEEecCcEEEEECCCCCCCeeEEEEEeCC----CEEEEEcCCHHHH
Confidence 4679999999999999999987643 3444444443 22221112 2334899998874 5799999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy4897 536 ANWARTLVQATHSCVLNQ 553 (774)
Q Consensus 536 ~~w~~~l~~~~~~~~~~~ 553 (774)
..|..+|..++....+..
T Consensus 92 ~~Wi~ai~~~~~~~~~~~ 109 (115)
T 2dn6_A 92 QEWIQAIHSTIHLLKLGS 109 (115)
T ss_dssp HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 999999999987655443
No 357
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=98.57 E-value=2.4e-07 Score=85.27 Aligned_cols=82 Identities=17% Similarity=0.252 Sum_probs=62.9
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCC-CCCcEEEEEEeCCCCceeeEEEEecChhHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSR-HSDVIVFSVRCGTPQGVATHHLRAETHRDLA 536 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~-~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~ 536 (774)
...|+++||+|++..|++|.++... .|....+|-....|...+ ....+||.|.++. ++++|.++|..|+.
T Consensus 31 ~~~Wk~R~fvL~~~~L~yy~~~~~~-----~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~----r~~~l~a~s~~e~~ 101 (126)
T 1fao_A 31 VKTWKTRWFTLHRNELKYFKDQMSP-----EPIRILDLTECSAVQFDYSQERVNCFCLVFPF----RTFYLCAKTGVEAD 101 (126)
T ss_dssp SCCEEEEEEEEETTEEEEESSTTCS-----SCSEEEEGGGCCEEEEECSSSSSSEEEEEETT----EEEEEECSSHHHHH
T ss_pred CCCcccEEEEEECCEEEEeCCCCCC-----CceeEEEccceEEEEecccCCCCCEEEEEeCC----cEEEEECCCHHHHH
Confidence 4679999999999999999987643 455555554444333222 3334999999863 68999999999999
Q ss_pred HHHHHHHHHHHH
Q psy4897 537 NWARTLVQATHS 548 (774)
Q Consensus 537 ~w~~~l~~~~~~ 548 (774)
.|..+|..++..
T Consensus 102 ~Wi~al~~~i~~ 113 (126)
T 1fao_A 102 EWIKILRWKLSQ 113 (126)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 999999988865
No 358
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=98.57 E-value=2.4e-07 Score=83.51 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=58.9
Q ss_pred CCceEEEEEEe-ccceeEEecCCCCChhcccCccccc--ceeeE-ee--eccCCCCC-cEEEEEEeCCCCceeeEEEEec
Q psy4897 458 TDRWVSIFGAV-TERELRLYESAPWSPEAWSTPAHVF--PLVST-RL--VSSSRHSD-VIVFSVRCGTPQGVATHHLRAE 530 (774)
Q Consensus 458 ~~~w~~~~~~l-~~~~l~~y~~~p~~~~~~~~~~~~~--~l~~~-r~--~~~s~~~~-~~~f~~~~~t~~g~~~~~~~~e 530 (774)
...|+++||+| ++..|++|.++.........+.... .|... .+ +....... .++|.|.+... ++++|++|
T Consensus 18 ~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~---r~~~l~a~ 94 (112)
T 3aj4_A 18 LKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDG---KTISLCAE 94 (112)
T ss_dssp SCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTS---CEEEEECS
T ss_pred CCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEEEecCC---cEEEEEeC
Confidence 46899999999 9999999999886443333333221 11111 11 11112222 48999997633 78999999
Q ss_pred ChhHHHHHHHHHHHHH
Q psy4897 531 THRDLANWARTLVQAT 546 (774)
Q Consensus 531 t~~dl~~w~~~l~~~~ 546 (774)
|..|+..|..+|.+|.
T Consensus 95 s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 95 STDDCLAWKFTLQDSR 110 (112)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998875
No 359
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.57 E-value=1.1e-07 Score=85.49 Aligned_cols=83 Identities=18% Similarity=0.394 Sum_probs=59.6
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLAN 537 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~~ 537 (774)
...|+++||+|++..|++|.+.... ..|...-+|....+.........++|.|.++ +-++++|.++|..|+..
T Consensus 19 ~k~Wk~RwfvL~~~~L~yyk~~~~~----~~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~---~~r~~~l~A~s~~e~~~ 91 (107)
T 2cof_A 19 NSQWKSRWCSVRDNHLHFYQDRNRS----KVAQQPLSLVGCEVVPDPSPDHLYSFRILHK---GEELAKLEAKSSEEMGH 91 (107)
T ss_dssp TTEEEEEEEEECSSCEEEECSSTTC----SEEEEEECTTTCEEECCCBTTBSCEEEEEET---TEEEEEEECSSHHHHHH
T ss_pred CCCcceEEEEEECCEEEEEeCCccc----CCCeeEEeccceEEEECCCCCCCeEEEEEeC---CCeEEEEEcCCHHHHHH
Confidence 3679999999999999999987641 1222233333223322222334499999986 34889999999999999
Q ss_pred HHHHHHHHHH
Q psy4897 538 WARTLVQATH 547 (774)
Q Consensus 538 w~~~l~~~~~ 547 (774)
|..+|.+++.
T Consensus 92 Wi~al~~~~~ 101 (107)
T 2cof_A 92 WLGLLLSESG 101 (107)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHHHc
Confidence 9999998763
No 360
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=98.56 E-value=2.9e-07 Score=87.62 Aligned_cols=82 Identities=12% Similarity=0.173 Sum_probs=61.6
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccC----CCCCcEEEEEEeCCCCceeeEEEEecChh
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSS----RHSDVIVFSVRCGTPQGVATHHLRAETHR 533 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s----~~~~~~~f~~~~~t~~g~~~~~~~~et~~ 533 (774)
...|+++||+|++..|++|.+.... .|....+|-...++... .....++|.|.++.. ++++|+++|..
T Consensus 34 ~k~WkkR~fvL~~~~L~yyk~~~~~-----~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~---r~~~l~a~s~~ 105 (148)
T 1u5f_A 34 GFEWQKRWCALSKTVFYYYGSDKDK-----QQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK---RIYQFTAASPK 105 (148)
T ss_dssp SCSEEEEEEEEETTEEEEESSTTCS-----SCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTS---CEEEEECSSHH
T ss_pred CCCceeEEEEEECCEEEEEcCCCCc-----ccceEEEcCCcEEEECCCcccCCCCccEEEEECCCC---cEEEEECCCHH
Confidence 4689999999999999999987653 45555555444433211 112239999998743 78999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy4897 534 DLANWARTLVQATH 547 (774)
Q Consensus 534 dl~~w~~~l~~~~~ 547 (774)
|+..|.++|.+++.
T Consensus 106 e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 106 DAEEWVQQLKFILQ 119 (148)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988864
No 361
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=98.55 E-value=3.1e-07 Score=85.29 Aligned_cols=86 Identities=15% Similarity=0.208 Sum_probs=67.0
Q ss_pred CCCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCc----eeeEEEEecCh
Q psy4897 457 STDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQG----VATHHLRAETH 532 (774)
Q Consensus 457 ~~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g----~~~~~~~~et~ 532 (774)
....|+.+|+||++.+|++|.......--+..|+..+.+ |-|.+....++|||.|-++.+.. .+++.|+++|+
T Consensus 26 ~k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~v---r~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ 102 (125)
T 1dyn_A 26 MKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKL---RDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQ 102 (125)
T ss_dssp GGTSSEEEEEEEESSEEEEESSTTCSCEEEEEECTTEEE---EECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSH
T ss_pred ccCCceeeEEEEeccceeeecCCcccccceEEECCCceE---eccCCCCCCCceEEEEECCCCccccccceEEEEeCCCH
Confidence 345699999999999999999999776667777766643 22323223566999999876542 36899999999
Q ss_pred hHHHHHHHHHHHH
Q psy4897 533 RDLANWARTLVQA 545 (774)
Q Consensus 533 ~dl~~w~~~l~~~ 545 (774)
.|+-.|.++|.+|
T Consensus 103 ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 103 EEVDSWKASFLRA 115 (125)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999766
No 362
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.53 E-value=7e-07 Score=86.07 Aligned_cols=83 Identities=10% Similarity=0.105 Sum_probs=62.3
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLAN 537 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~~ 537 (774)
...|+++|++|++..||+|.+..........++..+..+. +..+.....++|.|.++. ++|+|.+||..|+..
T Consensus 31 ~k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~---~~~~~~~~~~~F~I~t~~----r~~~f~A~s~ee~~e 103 (149)
T 1x1f_A 31 YREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLT---EQNSTEKNCAKFTLVLPK----EEVQLKTENTESGEE 103 (149)
T ss_dssp CCSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEE---ECCCTTSCCCEEEEECSS----CCEEEECSSHHHHHH
T ss_pred CCCceeEEEEEcCCEEEEEeCCCccccCcEEECCCceEEe---eccCCCCcCcEEEEEcCC----CEEEEEcCCHHHHHH
Confidence 4789999999999999999998766554555555553221 111122234899999874 589999999999999
Q ss_pred HHHHHHHHHH
Q psy4897 538 WARTLVQATH 547 (774)
Q Consensus 538 w~~~l~~~~~ 547 (774)
|.++|..++.
T Consensus 104 Wi~aI~~v~~ 113 (149)
T 1x1f_A 104 WRGFILTVTE 113 (149)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999987764
No 363
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=98.51 E-value=1.7e-07 Score=83.31 Aligned_cols=86 Identities=14% Similarity=0.273 Sum_probs=58.4
Q ss_pred CCCceEEEEEEeccceeEEecCCCCChhc-ccCcccccceeeEeeeccC-CCCCcEEEEEEeCCCCceeeEEEEecChhH
Q psy4897 457 STDRWVSIFGAVTERELRLYESAPWSPEA-WSTPAHVFPLVSTRLVSSS-RHSDVIVFSVRCGTPQGVATHHLRAETHRD 534 (774)
Q Consensus 457 ~~~~w~~~~~~l~~~~l~~y~~~p~~~~~-~~~~~~~~~l~~~r~~~~s-~~~~~~~f~~~~~t~~g~~~~~~~~et~~d 534 (774)
....|+++|++|++..|++|.+....... =..|....+|....+.... .....++|.|.+... ++++|.++|..|
T Consensus 19 ~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~---~~~~~~A~s~~e 95 (106)
T 1btn_A 19 SSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDG---NEYLFQAKDDEE 95 (106)
T ss_dssp SCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTS---CEEEEECSSHHH
T ss_pred CCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcccccCCccEEEEEecCC---CEEEEECCCHHH
Confidence 35789999999999999999876522110 0123333444332222222 223349999997643 789999999999
Q ss_pred HHHHHHHHHHH
Q psy4897 535 LANWARTLVQA 545 (774)
Q Consensus 535 l~~w~~~l~~~ 545 (774)
+..|..+|..|
T Consensus 96 ~~~Wi~ai~~A 106 (106)
T 1btn_A 96 MNTWIQAISSA 106 (106)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99999998764
No 364
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=98.50 E-value=4.9e-07 Score=83.99 Aligned_cols=87 Identities=16% Similarity=0.229 Sum_probs=68.3
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCC-C--------CcEEEEEEeCCCCc----eee
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRH-S--------DVIVFSVRCGTPQG----VAT 524 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~-~--------~~~~f~~~~~t~~g----~~~ 524 (774)
...|+++|+||++..|+.|.+....++ ..|..+.+|-.+.|...+.. . ..+.|.+.+... | -.+
T Consensus 19 ~k~W~~rwfVL~~~~L~yyK~~~~~~d--~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~-~~~~~~~~ 95 (120)
T 4a6h_A 19 LKSYSKGYYVLTPNFLHEFKTADRKKD--LVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQN-GIIRRGHN 95 (120)
T ss_dssp TTEEEEEEEEECSSEEEEESSCCTTTC--CSCSEEEEGGGEEEEEECCCCC---------CCEEEEEESSS-SSSCTTCE
T ss_pred CCCCccEEEEEeCCEEEEEcCCCcCcC--CCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCC-CcccCceE
Confidence 468999999999999999988775432 56888888877776553322 1 458999998763 3 359
Q ss_pred EEEEecChhHHHHHHHHHHHHHH
Q psy4897 525 HHLRAETHRDLANWARTLVQATH 547 (774)
Q Consensus 525 ~~~~~et~~dl~~w~~~l~~~~~ 547 (774)
++|+++|..|+..|.++|..++.
T Consensus 96 y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 96 WVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp EEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEcCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999998864
No 365
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.50 E-value=4.4e-07 Score=83.92 Aligned_cols=82 Identities=17% Similarity=0.266 Sum_probs=60.9
Q ss_pred CCceEEEEEEeccc--eeEEecCCCCChhcccCcccccceeeEeeeccCCC------CCcEEEEEEeCCCCceeeEEEEe
Q psy4897 458 TDRWVSIFGAVTER--ELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRH------SDVIVFSVRCGTPQGVATHHLRA 529 (774)
Q Consensus 458 ~~~w~~~~~~l~~~--~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~------~~~~~f~~~~~t~~g~~~~~~~~ 529 (774)
...|+++||+|++. .|++|.+... ..|....+|-.+.++..... ...++|.|.++.. ++++|++
T Consensus 31 ~~~Wk~R~fvL~~~~~~L~yy~~~~~-----~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~---~~~~l~a 102 (129)
T 1x05_A 31 RKNWKVRKFILREDPAYLHYYDPAGA-----EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADE---VHYFLQA 102 (129)
T ss_dssp CCCCEEEEEEEEETTTEEEEECSSCC-----SSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTC---CCCEEEC
T ss_pred CCCCeeEEEEEeCCCCEEEEECCCCC-----CcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCC---CEEEEEC
Confidence 46799999999986 8999987753 34555555554443322111 2349999998744 6799999
Q ss_pred cChhHHHHHHHHHHHHHH
Q psy4897 530 ETHRDLANWARTLVQATH 547 (774)
Q Consensus 530 et~~dl~~w~~~l~~~~~ 547 (774)
+|..|+..|..+|.+++.
T Consensus 103 ~s~~e~~~Wi~al~~~~~ 120 (129)
T 1x05_A 103 ATPKERTEWIKAIQMASR 120 (129)
T ss_dssp SSHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999998874
No 366
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.49 E-value=9.3e-07 Score=80.13 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=61.3
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLAN 537 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~~ 537 (774)
...|+++||+|++..|++|.+.... .|....+|-....|... +.++|.|.++. ++++|++++..|+..
T Consensus 22 ~~~WkkR~fvL~~~~L~yy~~~~~~-----~~~g~i~l~~~~~v~~~---~~~~F~i~~~~----r~~~l~a~s~~e~~~ 89 (115)
T 2cod_A 22 KRMFQKRWVKFDGLSISYYNNEKEM-----YSKGIIPLSAISTVRVQ---GDNKFEVVTTQ----RTFVFRVEKEEERND 89 (115)
T ss_dssp SSCCEEEEEEECSSEEEEEESSCCS-----SCCCEEETTTEEEEEEE---TTTEEEEEESS----CCEEEECSSHHHHHH
T ss_pred CCCCceEEEEEECCEEEEEcCCCCc-----ccCCEEECCcceEEEeC---CCCEEEEEeCC----cEEEEECCCHHHHHH
Confidence 4679999999999999999987653 45555555443222211 25899999763 689999999999999
Q ss_pred HHHHHHHHHHHH
Q psy4897 538 WARTLVQATHSC 549 (774)
Q Consensus 538 w~~~l~~~~~~~ 549 (774)
|..+|.+++...
T Consensus 90 Wi~~l~~~~~~~ 101 (115)
T 2cod_A 90 WISILLNALKSQ 101 (115)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC
Confidence 999999998654
No 367
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.48 E-value=1e-06 Score=80.83 Aligned_cols=84 Identities=18% Similarity=0.230 Sum_probs=64.4
Q ss_pred CCceEEEEEEeccc--eeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHH
Q psy4897 458 TDRWVSIFGAVTER--ELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDL 535 (774)
Q Consensus 458 ~~~w~~~~~~l~~~--~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl 535 (774)
...|+++||+|++. .|+.|.+.... .|....+|-...++.. .....++|.|.++. ++++|.+++..|+
T Consensus 23 ~k~WkkRwfvL~~~~~~L~Yy~~~~~~-----~~~g~I~L~~~~~~~~-~~~~~~~F~i~~~~----r~~~l~a~s~~e~ 92 (119)
T 2dhk_A 23 IRGWKSRWFFYDERKCQLYYSRTAQDA-----NPLDSIDLSSAVFDCK-ADAEEGIFEIKTPS----RVITLKAATKQAM 92 (119)
T ss_dssp SCCCEEEEEEEETTTTEEEEESSTTCC-----SCSEEEEGGGCEEEEC-TTGGGCEEEEECSS----CCEEEECSSHHHH
T ss_pred CCCceeEEEEEECCccEEEEECCCCCc-----ccccEEECCCCEEEec-CCCCCCEEEEEeCC----cEEEEECCCHHHH
Confidence 56899999999999 99999988753 4555555554444432 22234899999873 6899999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy4897 536 ANWARTLVQATHSCVL 551 (774)
Q Consensus 536 ~~w~~~l~~~~~~~~~ 551 (774)
..|..+|..+++....
T Consensus 93 ~~Wi~al~~~~~~~~~ 108 (119)
T 2dhk_A 93 LYWLQQLQMKRWEFHN 108 (119)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999876544
No 368
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.48 E-value=2.5e-07 Score=87.33 Aligned_cols=58 Identities=17% Similarity=0.241 Sum_probs=49.6
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceEEEEeeecc
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVVELEVGVGY 106 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V~L~V~R~~ 106 (774)
..|++|..|.++|||+ +| |++||+|++|||+++.++. +...++.. .|+.++|+|.|++
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g 115 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASST--DLQSALYNHSIGDTIKITYYRNG 115 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCHH--HHHHHHHHSSTTCEEEEEEEETT
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCHH--HHHHHHHhCCCCCEEEEEEEECC
Confidence 4689999999999999 87 9999999999999999764 45555554 5889999999875
No 369
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.47 E-value=1.3e-07 Score=82.44 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=48.0
Q ss_pred CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceEEEEeeecc
Q psy4897 46 MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVVELEVGVGY 106 (774)
Q Consensus 46 ~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V~L~V~R~~ 106 (774)
.|+.|..+.|+|||+++| |++||+|++|||++|.++.. ...++.. .++.+.|+|.|++
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~~d--~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNV--MNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCHHH--HHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCHHH--HHHHHHhcCCCCEEEEEEEECC
Confidence 468888999999999998 99999999999999998744 4455553 5788999998865
No 370
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.47 E-value=1e-07 Score=105.50 Aligned_cols=88 Identities=18% Similarity=0.280 Sum_probs=73.8
Q ss_pred ceEEEEEeccCCCCcceEEeCCCC--CCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHc--C
Q psy4897 174 QKRIIRVKKSENNGLGISIKGGKE--NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--G 249 (774)
Q Consensus 174 ~~r~V~L~k~~~~~LGfsi~gg~~--~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~--g 249 (774)
..+.+.+.+....+|||.+.+... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.. +
T Consensus 204 ~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 283 (388)
T 3suz_A 204 NCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQ 283 (388)
T ss_dssp CCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTC
T ss_pred cceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCC
Confidence 467888888777899999987431 123589999999999999988999999999999999999999999999874 4
Q ss_pred cceEEEEEEecc
Q psy4897 250 KLVELEVKYLRE 261 (774)
Q Consensus 250 ~~V~L~V~R~~~ 261 (774)
..+.|+|.|.+.
T Consensus 284 ~~v~l~v~r~~~ 295 (388)
T 3suz_A 284 TQVKLNIVSCPP 295 (388)
T ss_dssp SCEEEEEEECCS
T ss_pred Cccccccccccc
Confidence 569999988643
No 371
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.46 E-value=6.3e-07 Score=81.08 Aligned_cols=80 Identities=14% Similarity=0.243 Sum_probs=60.4
Q ss_pred CCceEEEEEEec--cceeEEecCCCCChhcccCcccccceeeEeeeccC--------CCCCcEEEEEEeCCCCceeeEEE
Q psy4897 458 TDRWVSIFGAVT--ERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSS--------RHSDVIVFSVRCGTPQGVATHHL 527 (774)
Q Consensus 458 ~~~w~~~~~~l~--~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s--------~~~~~~~f~~~~~t~~g~~~~~~ 527 (774)
...|+++||+|+ +..|++|.+... ..|....+|-....+... ...+.++|.|.++. ++++|
T Consensus 21 ~~~Wk~R~fvL~~~~~~L~yy~~~~~-----~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~----r~~~l 91 (117)
T 1v5u_A 21 MKPWKARWFVLDKTKHQLRYYDHRMD-----TECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTR----RVYNF 91 (117)
T ss_dssp SSCCEEEEEEEETTTTEEEEESSSSC-----SSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESS----CEEEE
T ss_pred CCCceeeEEEEECCCCEEEEeecCCC-----CccceEEEccCcEEEeecCccccccccCCCCeEEEEECCC----ceEEE
Confidence 467999999999 889999998764 346666666554433211 12233899998764 58999
Q ss_pred EecChhHHHHHHHHHHHHH
Q psy4897 528 RAETHRDLANWARTLVQAT 546 (774)
Q Consensus 528 ~~et~~dl~~w~~~l~~~~ 546 (774)
+++|..|+..|..+|.+++
T Consensus 92 ~a~s~~e~~~Wi~al~~~i 110 (117)
T 1v5u_A 92 CAQDVPSAQQWVDRIQSCL 110 (117)
T ss_dssp ECSSHHHHHHHHHHHHTTC
T ss_pred ECCCHHHHHHHHHHHHHHh
Confidence 9999999999999998765
No 372
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=98.44 E-value=8.5e-07 Score=81.14 Aligned_cols=82 Identities=16% Similarity=0.322 Sum_probs=61.5
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCC----CCCcEEEEEEeCCCCceeeEEEEecChh
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSR----HSDVIVFSVRCGTPQGVATHHLRAETHR 533 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~----~~~~~~f~~~~~t~~g~~~~~~~~et~~ 533 (774)
...|+++|++|++..|++|.+... ..|....+|-....|.... ....++|.|.++. ++++|+++|..
T Consensus 27 ~~~Wk~R~fvL~~~~L~yy~~~~~-----~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~----r~~~l~a~s~~ 97 (125)
T 1eaz_A 27 MKNWKRRYFQLDENTIGYFKSELE-----KEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTS----RTFYVQADSPE 97 (125)
T ss_dssp TCCEEEEEEEECSSEEEEESSTTC-----SSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSS----CEEEEECSSHH
T ss_pred CCCcceEEEEEeCCEEEEEcCCCC-----CcceeEEEcccceEEeeccccccCCcCCEEEEEeCC----cEEEEEcCCHH
Confidence 467999999999999999998764 3455555554433222111 1234899999763 58999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy4897 534 DLANWARTLVQATHS 548 (774)
Q Consensus 534 dl~~w~~~l~~~~~~ 548 (774)
|+..|..+|.+++..
T Consensus 98 e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 98 EMHSWIKAVSGAIVA 112 (125)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998864
No 373
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.43 E-value=4.9e-07 Score=84.55 Aligned_cols=85 Identities=13% Similarity=0.256 Sum_probs=59.0
Q ss_pred CCceEEEEEEec---cceeEEecCCCCChhcccCcccccceee-EeeeccC---CCCCcEEEEEEeCCCCceeeEEEEec
Q psy4897 458 TDRWVSIFGAVT---ERELRLYESAPWSPEAWSTPAHVFPLVS-TRLVSSS---RHSDVIVFSVRCGTPQGVATHHLRAE 530 (774)
Q Consensus 458 ~~~w~~~~~~l~---~~~l~~y~~~p~~~~~~~~~~~~~~l~~-~r~~~~s---~~~~~~~f~~~~~t~~g~~~~~~~~e 530 (774)
...|++||++|+ +..||.|+++- ..+.-..|...-+|-. +.|.... .....+||.|.++. ++|||.+|
T Consensus 29 ~k~WkrRwFvL~~~~~~~L~Y~k~~~-~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~----r~y~l~A~ 103 (126)
T 1v5p_A 29 SGKFLRRYFILDTQANCLLWYMDNPQ-NLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALS----QRYFLQAN 103 (126)
T ss_dssp SSCEEEEEEEEETTTTEEEEESSCTT-TSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSS----CEEEEECS
T ss_pred CCCccceEEEEecCCCCEEEEECCCC-CCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEECCC----EEEEEECC
Confidence 578999999999 56667778752 1223345555555544 2332211 12334899887764 68999999
Q ss_pred ChhHHHHHHHHHHHHHH
Q psy4897 531 THRDLANWARTLVQATH 547 (774)
Q Consensus 531 t~~dl~~w~~~l~~~~~ 547 (774)
|..|+..|.++|..+++
T Consensus 104 s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 104 DQKDLKDWVEALNQASK 120 (126)
T ss_dssp SHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 374
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.41 E-value=7e-07 Score=81.25 Aligned_cols=58 Identities=21% Similarity=0.404 Sum_probs=50.7
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecc
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
..|++|..|.++|||+++| |++||+|++|||+++.+ ..+...+++. ++.+.|+|.|++
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g 91 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGR 91 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH-CSSEEEEEEETT
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECC
Confidence 4689999999999999998 99999999999999985 4666777776 688999998865
No 375
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=98.41 E-value=6e-07 Score=91.30 Aligned_cols=82 Identities=12% Similarity=0.170 Sum_probs=62.2
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeecc----CCCCCcEEEEEEeCCCCceeeEEEEecChh
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS----SRHSDVIVFSVRCGTPQGVATHHLRAETHR 533 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~----s~~~~~~~f~~~~~t~~g~~~~~~~~et~~ 533 (774)
...|+++||+|++..|++|.+.... .|....+|-...++.. ......+||.|.++.. ++|+|+++|..
T Consensus 123 ~k~WkkRwfVL~~~~L~Yyk~~~~~-----~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~---r~~~l~A~s~~ 194 (211)
T 1u5e_A 123 GFEWQKRWCALSKTVFYYYGSDKDK-----QQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK---RIYQFTAASPK 194 (211)
T ss_dssp TCCCEEEEEEEETTEEEEESSTTCS-----SCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSS---CEEEEECSSHH
T ss_pred CCCcEeEEEEEECCEEEEEcCCCCc-----cceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCC---CEEEEEcCCHH
Confidence 4679999999999999999998754 4455555544343332 1122249999998743 78999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy4897 534 DLANWARTLVQATH 547 (774)
Q Consensus 534 dl~~w~~~l~~~~~ 547 (774)
|+..|.++|.+++.
T Consensus 195 e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 195 DAEEWVQQLKFILQ 208 (211)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998874
No 376
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.41 E-value=4.5e-07 Score=80.50 Aligned_cols=56 Identities=14% Similarity=0.143 Sum_probs=46.8
Q ss_pred eEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhc--CceEEEEeeecc
Q psy4897 48 ILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRA--GKVVELEVGVGY 106 (774)
Q Consensus 48 i~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~a--g~~V~L~V~R~~ 106 (774)
.+|..|.++|||+++| |++||+|++|||++|.++ .++...+... ++.+.|+|.|++
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPDW--DAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSSH--HHHHHHHHHTTTCSEEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHHhcCCCcEEEEEEECC
Confidence 4688999999999998 999999999999999977 4555555543 368999999876
No 377
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=98.39 E-value=1.2e-06 Score=77.73 Aligned_cols=81 Identities=11% Similarity=0.140 Sum_probs=59.8
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLAN 537 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~~ 537 (774)
...|+++|++|++..|+.|.+.... -..|....+|-.+.+... ..+.++|.|.+. +-++++|+++|..|+..
T Consensus 12 ~k~Wk~R~fvL~~~~L~Yy~~~~~~---~~~~~g~i~L~~~~v~~~--~~~~~~F~i~~~---~~r~~~l~a~s~~e~~~ 83 (103)
T 3rcp_A 12 LTGWQPRWFVLDNGILSYYDSQDDV---CKGSKGSIKMAVCEIKVH--SADNTRMELIIP---GEQHFYMKAVNAAERQR 83 (103)
T ss_dssp TTCEEEEEEEEETTEEEEESSCC------CCCSCEEEGGGCEEECC--TTCSSEEEEEET---TTEEEEEECSSHHHHHH
T ss_pred CCCeeceEEEEECCEEEEEecCCcc---cCCcccEEEeeeeEEEEc--CCCCceEEEEeC---CCCEEEEECCCHHHHHH
Confidence 4679999999999999999988632 123455555543443321 224689999986 33799999999999999
Q ss_pred HHHHHHHHH
Q psy4897 538 WARTLVQAT 546 (774)
Q Consensus 538 w~~~l~~~~ 546 (774)
|..+|.+|.
T Consensus 84 Wi~al~~a~ 92 (103)
T 3rcp_A 84 WLVALGSSK 92 (103)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHH
Confidence 999998775
No 378
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.38 E-value=3.5e-07 Score=81.75 Aligned_cols=58 Identities=17% Similarity=0.328 Sum_probs=49.2
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceEEEEeeecc
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVVELEVGVGY 106 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V~L~V~R~~ 106 (774)
..|++|..|.++|||++ | |++||+|++|||++|.++ .+...++.. .++.+.|+|.|++
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g 65 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKSS--QEFIDYIHSKKVGDTVKINYKHGD 65 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSSH--HHHHHHHHTSCTTCEEEEEEEETT
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECC
Confidence 46899999999999995 6 999999999999999976 455666664 5789999998865
No 379
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.36 E-value=8.6e-07 Score=79.92 Aligned_cols=59 Identities=17% Similarity=0.076 Sum_probs=47.7
Q ss_pred CeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecc
Q psy4897 47 PILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 47 gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
|+.|..+.|+|||+++| |++||+|++|||++|.++............++.+.|+|.|++
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECC
Confidence 57788888889999998 999999999999999998765432222246789999998875
No 380
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.35 E-value=2.2e-07 Score=82.24 Aligned_cols=59 Identities=19% Similarity=0.347 Sum_probs=50.5
Q ss_pred CCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceEEEEeeecc
Q psy4897 44 NKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVVELEVGVGY 106 (774)
Q Consensus 44 ~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V~L~V~R~~ 106 (774)
...|++|..|.++|||++ | |++||+|++|||+++.++ .+...+++. .++.+.|+|.|++
T Consensus 3 ~~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g 63 (94)
T 2kl1_A 3 EAKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINTS--EQIVSYVREKQAGDRVRVTFIRDR 63 (94)
T ss_dssp CCCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCCH--HHHHHHHHHSCTTCCEEEEEEETT
T ss_pred CCCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECC
Confidence 346899999999999998 7 999999999999999875 556666765 5889999999875
No 381
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=98.35 E-value=1.2e-06 Score=82.13 Aligned_cols=88 Identities=14% Similarity=0.217 Sum_probs=67.6
Q ss_pred CCceEEEEEEeccceeEEecCCCCC---hhc-ccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChh
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWS---PEA-WSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHR 533 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~---~~~-~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~ 533 (774)
-..|+++|++|+|..||+|+..... ..+ -..|....+|....|.........+||.|.+... | ..|.|++++..
T Consensus 21 ~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e~~~~~~~F~L~~~~~-G-~~Y~fqA~s~~ 98 (126)
T 2dtc_A 21 LSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDDPEHPDIFQLNNPDK-G-NVYKFQTGSRF 98 (126)
T ss_dssp SCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCCTTSTTEEEEECTTS-C-SEEEEECSSHH
T ss_pred ccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecCCCCCCCEEEEeeCCC-C-CEEEEeCCCHH
Confidence 4689999999999999999965322 122 3478888888777765333334459999996532 4 66999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy4897 534 DLANWARTLVQATH 547 (774)
Q Consensus 534 dl~~w~~~l~~~~~ 547 (774)
++..|.++|..|+.
T Consensus 99 ~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 99 HAILWHKHLDDACK 112 (126)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998875
No 382
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=98.35 E-value=1e-06 Score=81.78 Aligned_cols=86 Identities=15% Similarity=0.286 Sum_probs=60.6
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcc-------cCcccccceeeEeeeccC--CCCCcEEEEEEeCCCCceeeEEEE
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAW-------STPAHVFPLVSTRLVSSS--RHSDVIVFSVRCGTPQGVATHHLR 528 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~-------~~~~~~~~l~~~r~~~~s--~~~~~~~f~~~~~t~~g~~~~~~~ 528 (774)
...|+++|++|++..|++|.+........ ..|....+|-.+.+...+ ....+++|.|++..+ ..|+|.
T Consensus 28 ~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~---~~ylfq 104 (124)
T 3pp2_A 28 KKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDG---SEYLIQ 104 (124)
T ss_dssp SCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTS---CEEEEE
T ss_pred CCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecccccCCCceEEEEECCCC---CEEEEE
Confidence 46899999999999999999876443222 134444444333322221 223359999998643 679999
Q ss_pred ecChhHHHHHHHHHHHHH
Q psy4897 529 AETHRDLANWARTLVQAT 546 (774)
Q Consensus 529 ~et~~dl~~w~~~l~~~~ 546 (774)
+++..||..|.++|..|+
T Consensus 105 A~s~~e~~~Wi~aI~~aI 122 (124)
T 3pp2_A 105 HDSEAIISTWHKAIAQGI 122 (124)
T ss_dssp CSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 999999999999999886
No 383
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.33 E-value=8.9e-07 Score=81.70 Aligned_cols=82 Identities=15% Similarity=0.208 Sum_probs=59.4
Q ss_pred CCceEEEEEEec--cceeEEecCCCCChhcccCcccccceeeEeeeccCC----C--C---CcEEEEEEeCCCCceeeEE
Q psy4897 458 TDRWVSIFGAVT--ERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSR----H--S---DVIVFSVRCGTPQGVATHH 526 (774)
Q Consensus 458 ~~~w~~~~~~l~--~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~----~--~---~~~~f~~~~~t~~g~~~~~ 526 (774)
...|+++||+|+ +..|+.|+++. .-..|....+|-.+.+..... . . ..++|.|.++.. ++++
T Consensus 31 ~~~Wk~R~fvL~~d~~~L~yy~~~~----~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~---r~~~ 103 (129)
T 1x1g_A 31 RKNWKVRRFVLRKDPAFLHYYDPSK----EENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDD---THYY 103 (129)
T ss_dssp SSSEEEEEEEEEESSCEEEEECSSS----CCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTC---CCEE
T ss_pred CCCeeeEEEEEeCCCCeEEEeCCCC----cCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCC---CEEE
Confidence 577999999999 46899998862 123555555554433322111 1 1 348999998854 6899
Q ss_pred EEecChhHHHHHHHHHHHHH
Q psy4897 527 LRAETHRDLANWARTLVQAT 546 (774)
Q Consensus 527 ~~~et~~dl~~w~~~l~~~~ 546 (774)
|+++|..|+..|..+|.+++
T Consensus 104 l~a~s~~e~~~Wi~al~~~~ 123 (129)
T 1x1g_A 104 IQASSKAERAEWIEAIKKLT 123 (129)
T ss_dssp ECCSSHHHHHHHHHHHHHHS
T ss_pred EEcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999886
No 384
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=98.33 E-value=2.3e-06 Score=79.43 Aligned_cols=90 Identities=13% Similarity=0.192 Sum_probs=58.1
Q ss_pred CCceEEEEEEecc-ceeEEecCCCC------Ch-hc-----ccCcccccceeeEeeecc----CCC--CCcEEEEEEeCC
Q psy4897 458 TDRWVSIFGAVTE-RELRLYESAPW------SP-EA-----WSTPAHVFPLVSTRLVSS----SRH--SDVIVFSVRCGT 518 (774)
Q Consensus 458 ~~~w~~~~~~l~~-~~l~~y~~~p~------~~-~~-----~~~~~~~~~l~~~r~~~~----s~~--~~~~~f~~~~~t 518 (774)
...|+++|++|++ .-||.|++... .+ -+ =..|....+|....+... ++. .+.+||.|.+++
T Consensus 19 ~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~ 98 (128)
T 2rlo_A 19 NKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSST 98 (128)
T ss_dssp TCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTT
T ss_pred cCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccccccccCCceEEEEcCC
Confidence 5789999999996 66777765211 00 00 011222233322222110 111 345999999885
Q ss_pred CCceeeEEEEecChhHHHHHHHHHHHHHHHHH
Q psy4897 519 PQGVATHHLRAETHRDLANWARTLVQATHSCV 550 (774)
Q Consensus 519 ~~g~~~~~~~~et~~dl~~w~~~l~~~~~~~~ 550 (774)
. ++|+|.++|..|+..|..+|.+++..+.
T Consensus 99 ~---r~~~l~A~s~~e~~~Wi~ai~~~i~~~l 127 (128)
T 2rlo_A 99 G---QTWHFEAASFEERDAWVQAIESQILASL 127 (128)
T ss_dssp S---CEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred C---CEEEEEcCCHHHHHHHHHHHHHHHHHHc
Confidence 3 7899999999999999999999998764
No 385
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=98.33 E-value=3.5e-06 Score=88.62 Aligned_cols=91 Identities=11% Similarity=0.051 Sum_probs=63.4
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeecc----CCCCCcEEEEEEeCCCC--ceeeEEEEecC
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS----SRHSDVIVFSVRCGTPQ--GVATHHLRAET 531 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~----s~~~~~~~f~~~~~t~~--g~~~~~~~~et 531 (774)
..+|+++||+|++..||+|.+..........++..+..+..-.+.. ......+||.|.++... .-.+|||++||
T Consensus 181 ~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s 260 (291)
T 3tca_A 181 KKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDD 260 (291)
T ss_dssp SSCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSS
T ss_pred CCCceEEEEEEeCCEEEEEecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCC
Confidence 4679999999999999999887765544444444333222211111 11223499999986432 22579999999
Q ss_pred hhHHHHHHHHHHHHHHH
Q psy4897 532 HRDLANWARTLVQATHS 548 (774)
Q Consensus 532 ~~dl~~w~~~l~~~~~~ 548 (774)
..|+..|..+|-.|-|.
T Consensus 261 ~~e~~~Wi~air~Ak~g 277 (291)
T 3tca_A 261 ARTLSQWVMGIRIAKYG 277 (291)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999888764
No 386
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.33 E-value=1.5e-06 Score=89.18 Aligned_cols=137 Identities=17% Similarity=0.240 Sum_probs=93.7
Q ss_pred CCceEEEEcceeccCCCccccCCCCCCCCCCCCCCcceeeecchhhhhhhhccCCC-CCCCCCCCCCCCCCCccCCCCCC
Q psy4897 378 GDLQLIGWLARKLGQSDCLENGRASSESSGDDSTDRWVSIFGAVTERELRLYESAP-WSPEAWSTPAHNGRASSESSGDD 456 (774)
Q Consensus 378 ~~~~~mGWl~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 456 (774)
+.+-+=|||.++.. .-..|+.+++||+|--+..|.+.+ --.+.|-.-.. +.. .. .
T Consensus 19 ~~~~~~g~l~~~~~------------------~~~~w~~rw~vl~~~~~~~~~~~~~~~k~G~L~K~g--~~~--~~--~ 74 (228)
T 3tfm_A 19 GSPYFHSFLYMNGG------------------LMNSWKRRWCVLKDETFLWFRSKQEALKQGWLHNNG--GGS--ST--L 74 (228)
T ss_dssp --CCEEEEEEECCT------------------TTCCCEEEEEEEETTEEEEESSCCCSSEEEEEEECG--GGC--SS--S
T ss_pred CCCceEEEEeecCc------------------ccccceEEEEEEeCCEEEEeccCCCcceEEEEEEEC--CCc--CC--c
Confidence 46678899998821 235699999999999888887532 22333322111 000 00 1
Q ss_pred CCCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHH
Q psy4897 457 STDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLA 536 (774)
Q Consensus 457 ~~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~ 536 (774)
....|+++||+|++..|++|.+.... .|....+|-...++.... ...++|.|.++. ++++|.++|..|+.
T Consensus 75 ~~k~WkkRwfvL~~~~L~Yyk~~~~~-----~~~g~I~L~~~~~v~~~~-~k~~~F~I~t~~----r~~~l~A~s~~e~~ 144 (228)
T 3tfm_A 75 SRRNWKKRWFVLRQSKLMYFENDSEE-----KLKGTVEVRSAKEIIDNT-NKENGIDIIMAD----RTFHLIAESPEDAS 144 (228)
T ss_dssp CGGGCEEEEEEECSSEEEEESSTTCC-----SEEEEEEGGGCSEEEEET-TTTSEEEEECSS----CEEEEECSSHHHHH
T ss_pred ccCCceEEEEEEeCCEEEEEeCCCCc-----ceeEEEEcCCCEEeccCC-CCCcEEEEEcCC----cEEEEEcCCHHHHH
Confidence 24789999999999999999998754 344444444333332211 335999998863 68999999999999
Q ss_pred HHHHHHHHHHHH
Q psy4897 537 NWARTLVQATHS 548 (774)
Q Consensus 537 ~w~~~l~~~~~~ 548 (774)
.|.++|.+++..
T Consensus 145 ~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 145 QWFSVLSQVHSS 156 (228)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhc
Confidence 999999999864
No 387
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=1.5e-06 Score=79.73 Aligned_cols=88 Identities=16% Similarity=0.237 Sum_probs=65.1
Q ss_pred CCceEEEEEEec--cceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHH
Q psy4897 458 TDRWVSIFGAVT--ERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDL 535 (774)
Q Consensus 458 ~~~w~~~~~~l~--~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl 535 (774)
...|+++||+|+ +..|+.|.+.... -..|....+|-.+.+.. ...+.++|.|.++.. ++++|++++..|+
T Consensus 21 ~~~Wk~R~fvL~~~~~~L~Yyk~~~~~---~~~~~g~I~L~~~~v~~--~~~~~~~F~i~~~~~---r~~~l~a~s~~e~ 92 (120)
T 2d9x_A 21 VTGWQYRFFVLNNEAGLLEYFVNEQSR---NQKPRGTLQLAGAVISP--SDEDSHTFTVNAASG---EQYKLRATDAKER 92 (120)
T ss_dssp TTEEEEEEEEECTTTCEEEEESSGGGS---SSCCSEEEECTTCCEEC--CSSSSSCEEECCSSS---CCEEECCSSHHHH
T ss_pred CCCceEEEEEEECCCCEEEEEecCccc---CCCccceEEcceEEEEe--cCCCCCEEEEEcCCC---CEEEEECCCHHHH
Confidence 467999999999 5799999887632 12355555554444332 223459999998743 7899999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy4897 536 ANWARTLVQATHSCVLNQ 553 (774)
Q Consensus 536 ~~w~~~l~~~~~~~~~~~ 553 (774)
..|..+|.+++.......
T Consensus 93 ~~Wi~al~~~~~~~~~~~ 110 (120)
T 2d9x_A 93 QHWVSRLQICTQHHTEAI 110 (120)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhhh
Confidence 999999999987766544
No 388
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=98.32 E-value=1.8e-06 Score=80.76 Aligned_cols=88 Identities=20% Similarity=0.306 Sum_probs=62.3
Q ss_pred CCceEEEEEEeccceeEEecCCCCChh------cccCcccccceeeEeeeccCC-CCCcEEEEEEeCCCCceeeEEEEec
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPE------AWSTPAHVFPLVSTRLVSSSR-HSDVIVFSVRCGTPQGVATHHLRAE 530 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~------~~~~~~~~~~l~~~r~~~~s~-~~~~~~f~~~~~t~~g~~~~~~~~e 530 (774)
...|+++|++|++..|++|.+.-.... .-..|....+|-...+....+ ...+++|.|.+... ..|+|.++
T Consensus 31 ~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~---~~yl~qA~ 107 (129)
T 2p0d_A 31 RKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPG---HEFLLQSD 107 (129)
T ss_dssp CCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTTSCSSSSEEEEECTTS---CEEEEECS
T ss_pred CCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCC---CEEEEECC
Confidence 378999999999999999998842211 123555555554444333222 23349999998754 67999999
Q ss_pred ChhHHHHHHHHHHHHHHH
Q psy4897 531 THRDLANWARTLVQATHS 548 (774)
Q Consensus 531 t~~dl~~w~~~l~~~~~~ 548 (774)
+..|+..|.++|..++..
T Consensus 108 s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 108 HETELRAWHRALRTVIER 125 (129)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999999865
No 389
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=98.31 E-value=2.1e-06 Score=90.14 Aligned_cols=90 Identities=19% Similarity=0.254 Sum_probs=65.5
Q ss_pred CCceEEEEEEeccceeEEecCCCCCh-hcccCcccccceeeEeeeccCC-CCCcEEEEEEeCCCCceeeEEEEecChhHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSP-EAWSTPAHVFPLVSTRLVSSSR-HSDVIVFSVRCGTPQGVATHHLRAETHRDL 535 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~-~~~~~~~~~~~l~~~r~~~~s~-~~~~~~f~~~~~t~~g~~~~~~~~et~~dl 535 (774)
...|+++|++|++..|++|.+..... +.-..|....+|-.+.+..... ...++||.|.+... .+|+|.+++..|+
T Consensus 36 ~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~---r~y~f~A~s~ee~ 112 (263)
T 3a8p_A 36 RRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCG---DVYLFQATSQTDL 112 (263)
T ss_dssp TCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTS---CEEEEECSSHHHH
T ss_pred CCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCC---cEEEEEcCCHHHH
Confidence 56899999999999999999865322 1234566666664333332222 23359999998633 7899999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy4897 536 ANWARTLVQATHSCV 550 (774)
Q Consensus 536 ~~w~~~l~~~~~~~~ 550 (774)
..|.++|..++....
T Consensus 113 ~~Wi~aI~~a~~~~~ 127 (263)
T 3a8p_A 113 ENWVTAIHSACASLF 127 (263)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999987664
No 390
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.31 E-value=1.2e-06 Score=79.65 Aligned_cols=58 Identities=24% Similarity=0.321 Sum_probs=49.6
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecc
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
..|++|..|.++|||+++| |++||+|++|||+++.++ .+....++ .++.+.|+|.|++
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~-~g~~v~l~v~R~g 91 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVDS--SELQEAVL-TESPLLLEVRRGN 91 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHH-HCSSEEEEEEETT
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHh-CCCeEEEEEEECC
Confidence 4689999999999999998 999999999999999865 55555664 5788999998865
No 391
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=98.31 E-value=2.7e-06 Score=82.59 Aligned_cols=83 Identities=17% Similarity=0.342 Sum_probs=55.5
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceee--Eee-eccCCCCCcEEEEEEeCCCCceeeEEEEecChhH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVS--TRL-VSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRD 534 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~--~r~-~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~d 534 (774)
...|+++||||++..|++|.+..... ..|....+|-. +.+ +........+||.|.+.. ++|+|.+++..|
T Consensus 26 ~k~WkkRwfvL~~~~L~yyk~~~~~~---~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~----r~~~l~A~s~~e 98 (168)
T 2j59_M 26 IRPWKQMYVVLRGHSLYLYKDKREQT---TPSEEEQPISVNACLIDISYSETKRKNVFRLTTSD----CECLFQAEDRDD 98 (168)
T ss_dssp --CCEEEEEEEETTEEEEESCTTCC-----------CEECSSCEEEECSSSCSCSSEEEEECSS----CEEEEECSSHHH
T ss_pred CCCceEEEEEEeCCEEEEEECCcccc---cccCCceEecccceEEEeccccCCCCCEEEEEeCC----ceEEEEcCCHHH
Confidence 56799999999999999999885421 12333333322 111 111223345999999874 579999999999
Q ss_pred HHHHHHHHHHHHH
Q psy4897 535 LANWARTLVQATH 547 (774)
Q Consensus 535 l~~w~~~l~~~~~ 547 (774)
+..|..+|..++.
T Consensus 99 ~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 99 MLAWIKTIQESSN 111 (168)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998863
No 392
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.30 E-value=1.6e-07 Score=82.94 Aligned_cols=56 Identities=27% Similarity=0.454 Sum_probs=48.6
Q ss_pred CeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceEEEEeeecc
Q psy4897 47 PILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVVELEVGVGY 106 (774)
Q Consensus 47 gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V~L~V~R~~ 106 (774)
|++|..|.++|||++ | |++||+|++|||+++.++ .+...+++. .++.|.|+|.|++
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g 59 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQSA--EKLIDYISSKKAGDKVTLKIEREE 59 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSSH--HHHHHHHSSCCSSCEECEEEESSS
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCCH--HHHHHHHHcCCCCCEEEEEEEECC
Confidence 678999999999998 7 999999999999999865 566777765 4889999999875
No 393
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.27 E-value=1.8e-06 Score=95.36 Aligned_cols=74 Identities=19% Similarity=0.275 Sum_probs=62.7
Q ss_pred CcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh-cCceEEEEeeecc
Q psy4897 32 NGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-AGKVVELEVGVGY 106 (774)
Q Consensus 32 ~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~-ag~~V~L~V~R~~ 106 (774)
.|+|+.+........+++|..|.++|||+++| |++||+|++|||++|.+++..+++.+++. .|+.|+|+|.|.+
T Consensus 85 ~giG~~~~~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g 159 (388)
T 1fc6_A 85 TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPG 159 (388)
T ss_dssp BBCSEEEEECTTCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETT
T ss_pred EEEEEEEEEeecCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 47899887431224579999999999999998 99999999999999999988888888874 5788999998875
No 394
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.26 E-value=1.1e-06 Score=95.87 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=51.2
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceEEEEeeecc
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVVELEVGVGY 106 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V~L~V~R~~ 106 (774)
..|++|..|.++|||+++| |++||+|++|||++|.++ .+...++.. .|+.|+|+|.|++
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g 322 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNG 322 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSCH--HHHHHHHHTSCTTCEEEEEEEETT
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECC
Confidence 4689999999999999998 999999999999999966 455555654 6899999999976
No 395
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.25 E-value=1e-06 Score=76.59 Aligned_cols=59 Identities=17% Similarity=0.137 Sum_probs=50.6
Q ss_pred CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEecc
Q psy4897 200 MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLRE 261 (774)
Q Consensus 200 ~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~ 261 (774)
.++.|..+.|+++|+++| |++||+|++|||++|.+ ..++.++++. .++.+.|+|.|.+.
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~--~~d~~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTC--HHHHHHHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 356788888888999998 99999999999999987 7888888875 57889999988654
No 396
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.25 E-value=2.6e-06 Score=77.40 Aligned_cols=59 Identities=22% Similarity=0.414 Sum_probs=53.0
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEecc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
..+++|..|.++|||+++| |++||+|++|||+++.+ ..++...++. ++.+.|+|.|.++
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g~ 92 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRE 92 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH-CSSEEEEEEETTE
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECCE
Confidence 4679999999999999998 99999999999999986 7888888887 6899999998654
No 397
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.24 E-value=7e-07 Score=77.87 Aligned_cols=58 Identities=22% Similarity=0.307 Sum_probs=47.7
Q ss_pred CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh-cCceEEEEeeecc
Q psy4897 46 MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-AGKVVELEVGVGY 106 (774)
Q Consensus 46 ~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~-ag~~V~L~V~R~~ 106 (774)
.+++|..|.++|||+++| |++||+|++|||+++.++ .+....+.. .++.+.|+|.|++
T Consensus 4 ~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 4 IEPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQW--VTFVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp --CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCCH--HHHHHHHHHCTTCCEEEEEEETT
T ss_pred cCeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCCH--HHHHHHHhcCCCCeEEEEEEECC
Confidence 356789999999999997 999999999999999976 556666654 4778999998865
No 398
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.23 E-value=3.7e-06 Score=79.25 Aligned_cols=60 Identities=15% Similarity=0.210 Sum_probs=53.1
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEeccc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLREV 262 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~~ 262 (774)
..+++|..|.++|||+ +| |++||+|++|||+++.+ ..++...+.. .++.+.|+|.|.++.
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 117 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNHSIGDTIKITYYRNGKE 117 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHSSTTCEEEEEEEETTEE
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 3679999999999999 87 99999999999999987 7888888886 578999999987653
No 399
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.21 E-value=3.4e-06 Score=75.32 Aligned_cols=60 Identities=17% Similarity=0.273 Sum_probs=52.4
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEeccc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLREV 262 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~~ 262 (774)
..+++|..|.+++||+. | |++||+|++|||+++.+ .+++...+.. .++.+.|+|.|.++.
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 67 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHSKKVGDTVKINYKHGDKN 67 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 35799999999999994 6 99999999999999987 7899998886 578999999986653
No 400
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.18 E-value=2e-06 Score=74.88 Aligned_cols=58 Identities=22% Similarity=0.330 Sum_probs=50.8
Q ss_pred CeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH-cCcceEEEEEEecc
Q psy4897 201 PILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-AGKLVELEVKYLRE 261 (774)
Q Consensus 201 pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~V~L~V~R~~~ 261 (774)
+++|..|.+++||+++| |++||+|++|||+++.+ ..++...++. .++.+.|+|.|.+.
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~g~ 63 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPGXSLALEIERQGS 63 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHCTTCCEEEEEEETTE
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcCCCCeEEEEEEECCe
Confidence 46789999999999998 99999999999999987 7899988886 57789999988654
No 401
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.18 E-value=5.5e-07 Score=79.40 Aligned_cols=58 Identities=24% Similarity=0.433 Sum_probs=51.2
Q ss_pred CeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEeccc
Q psy4897 201 PILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLREV 262 (774)
Q Consensus 201 pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~~ 262 (774)
+++|..|.++|||++ | |++||+|++|||+++.+ ..++..+|+. .++.+.|+|.|.++.
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 578899999999998 7 99999999999999987 7899999886 478999999987653
No 402
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.17 E-value=2.1e-06 Score=75.89 Aligned_cols=60 Identities=20% Similarity=0.354 Sum_probs=52.9
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEeccc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLREV 262 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~~ 262 (774)
..+++|..|.++|||++ | |++||+|++|||+++.+ ..++..+++. .++.+.|+|.|.++.
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 35789999999999998 7 99999999999999987 7889998887 588999999987653
No 403
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.17 E-value=1.6e-06 Score=96.36 Aligned_cols=73 Identities=19% Similarity=0.266 Sum_probs=58.2
Q ss_pred CCcccEEEEccCCCCC--CeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeeccc
Q psy4897 31 NNGLGISIKGGKENKM--PILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGYG 107 (774)
Q Consensus 31 ~~gLGfsI~GG~e~~~--gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~~ 107 (774)
..|+||++....+... .++|..|.|||||+++| |++||+|++|||++|.++. +..+++..+..|+|+|.|.+.
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 4567777664433222 48899999999999998 9999999999999999985 455566688899999988753
No 404
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.16 E-value=8.4e-06 Score=79.93 Aligned_cols=84 Identities=14% Similarity=0.096 Sum_probs=58.6
Q ss_pred CCceEEEEEEeccceeEEecCC----CCChhcccCcccccceeeEeee---ccCCCCCc---------------------
Q psy4897 458 TDRWVSIFGAVTERELRLYESA----PWSPEAWSTPAHVFPLVSTRLV---SSSRHSDV--------------------- 509 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~----p~~~~~~~~~~~~~~l~~~r~~---~~s~~~~~--------------------- 509 (774)
...|+++|+||++..|+.|.+. +....-+..++..+..+ ..+ ........
T Consensus 21 ~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~v--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 98 (169)
T 1btk_A 21 PLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCV--ETVVPEKNPPPERQIPRRGEESSEMEQISIIERFP 98 (169)
T ss_dssp CCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEE--EECCCCSSCCGGGCC---------CCTTHHHHCCC
T ss_pred cCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEE--EeccCCCCcchhcccccccCccccccccccccccc
Confidence 4679999999999999999983 33333344444433211 111 11111111
Q ss_pred EEEEEEeCCCCceeeEEEEecChhHHHHHHHHHHHHHH
Q psy4897 510 IVFSVRCGTPQGVATHHLRAETHRDLANWARTLVQATH 547 (774)
Q Consensus 510 ~~f~~~~~t~~g~~~~~~~~et~~dl~~w~~~l~~~~~ 547 (774)
++|.|.++. ++|||.++|..|+..|..+|.+++.
T Consensus 99 ~~F~I~t~~----rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 99 YPFQVVYDE----GPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp EEEEEEETT----CCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred ccEEEEeCC----ceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 899999875 5899999999999999999999885
No 405
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.16 E-value=2e-06 Score=92.42 Aligned_cols=59 Identities=20% Similarity=0.230 Sum_probs=51.5
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceEEEEeeecc
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVVELEVGVGY 106 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V~L~V~R~~ 106 (774)
..+++|..|.++|||+++| |++||+|++|||+++.++ .+...+++. .++.|.|+|.|++
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g 303 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISA--LETMDQVAEIRPGSVIPVVVMRDD 303 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCCH--HHHHHHHHTSCTTCEEEEEEESSS
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECC
Confidence 4689999999999999998 999999999999999976 556666664 6889999999875
No 406
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.15 E-value=4.2e-06 Score=74.14 Aligned_cols=57 Identities=14% Similarity=0.196 Sum_probs=50.0
Q ss_pred eEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH-c-CcceEEEEEEecc
Q psy4897 202 ILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-A-GKLVELEVKYLRE 261 (774)
Q Consensus 202 i~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-~-g~~V~L~V~R~~~ 261 (774)
.+|..|.++|||+++| |++||+|++|||++|.+ ++++...|.. . ++.+.|+|.|.+.
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPD--WDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSS--HHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 4789999999999998 99999999999999987 7899888876 3 3689999998764
No 407
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.13 E-value=5.4e-06 Score=75.27 Aligned_cols=59 Identities=22% Similarity=0.290 Sum_probs=52.0
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEecc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
..+++|..|.+++||+++| |++||+|++|||+++.+ ..++...++ .++.+.|+|.|.+.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~-~g~~v~l~v~R~g~ 92 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVL-TESPLLLEVRRGND 92 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHH-HCSSEEEEEEETTE
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHh-CCCeEEEEEEECCE
Confidence 3579999999999999998 99999999999999987 788888884 57889999988654
No 408
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.10 E-value=3.6e-06 Score=90.63 Aligned_cols=70 Identities=21% Similarity=0.327 Sum_probs=55.1
Q ss_pred cccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHh--cCceEEEEeee-cc
Q psy4897 33 GLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKVVELEVGV-GY 106 (774)
Q Consensus 33 gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~--ag~~V~L~V~R-~~ 106 (774)
.||+.+..- +...+++|..|.++|||+++| |++||+|++|||++|.++ .+...++.. .++.|+|+|.| ++
T Consensus 230 ~lGi~~~~~-~~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~~g 302 (324)
T 1y8t_A 230 SLGVQVTND-KDTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQDPSG 302 (324)
T ss_dssp ECCEEEESC-SSSSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEECSSC
T ss_pred ccceEeeec-cCCCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCC
Confidence 455555421 224689999999999999998 999999999999999976 445555553 58899999998 64
No 409
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=98.08 E-value=1.3e-05 Score=87.49 Aligned_cols=85 Identities=13% Similarity=0.252 Sum_probs=62.8
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCC------------Cc----
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTP------------QG---- 521 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~------------~g---- 521 (774)
...|+++|++|++..|++|.++... .|....+|-.+.+.........+||.|.++.. .|
T Consensus 226 ~k~WkkRwFVL~~~~L~Yyk~~~~~-----~p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~ 300 (347)
T 2r09_A 226 VKTWKRRWFILTDNCLYYFEYTTDK-----EPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKACKTEADGRVVE 300 (347)
T ss_dssp SCCEEEEEEEEETTEEEEESSTTCS-----SCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEE
T ss_pred cccceeEEEEEcCCEEEEEcCCCcc-----CCcEEEEcCCeEEEEccCCCCCCEEEEEeCCccccccccccccccccccc
Confidence 4679999999999999999988653 34444554443433222334459999997632 11
Q ss_pred --eeeEEEEecChhHHHHHHHHHHHHHH
Q psy4897 522 --VATHHLRAETHRDLANWARTLVQATH 547 (774)
Q Consensus 522 --~~~~~~~~et~~dl~~w~~~l~~~~~ 547 (774)
-++++|+++|..|+..|..+|.+++.
T Consensus 301 ~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 301 GNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp CCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 26899999999999999999999874
No 410
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.04 E-value=3.9e-06 Score=78.42 Aligned_cols=57 Identities=25% Similarity=0.263 Sum_probs=48.0
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH--hcCceEEEEeeecc
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK--RAGKVVELEVGVGY 106 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk--~ag~~V~L~V~R~~ 106 (774)
..+++|..|.+++||+++ |++||+|++|||++|.++ .+....++ ..++.+.|+| |++
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~--~dl~~~l~~~~~g~~v~l~V-R~g 82 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNL--TTYSAALKTISVGEVINITT-DQG 82 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSH--HHHHHHHTTCCTTCEEEEEE-TTE
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE-ECC
Confidence 368999999999999997 999999999999999976 44555565 3578999999 765
No 411
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=98.01 E-value=3.9e-05 Score=85.13 Aligned_cols=82 Identities=11% Similarity=0.169 Sum_probs=58.7
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLAN 537 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~~ 537 (774)
...|+++||+|++..|+.|..... .|....+|..+.+........++||.|.++++ -++++|.+||..|+..
T Consensus 317 ~~~W~rrwfvl~~~~l~y~~~~~~------~~~~~~~l~~~~v~~~~~~~r~~cF~i~~~~~--~~~~~l~A~s~~e~~~ 388 (407)
T 4h8s_A 317 TTTWERLYFFTQGGNLMCQPRGAV------AGGLIQDLDNCSVMAVDCEDRRYCFQITTPNG--KSGIILQAESRKENEE 388 (407)
T ss_dssp CEEEEEEEEEECSSCEECCCTTCS------SCCCCBCSSCCEEEEECCTTCSSEEEEECTTS--SCCEEEECSSSHHHHH
T ss_pred CCCceEEEEEEECCEEEEEeCCCC------CCCeEEECCceEEEECCCCCCCceEEEEecCC--CceEEEEcCCHHHHHH
Confidence 567999999999999999976542 23333444333222222222349999998753 3589999999999999
Q ss_pred HHHHHHHHHH
Q psy4897 538 WARTLVQATH 547 (774)
Q Consensus 538 w~~~l~~~~~ 547 (774)
|..+|..++.
T Consensus 389 Wi~ai~~a~~ 398 (407)
T 4h8s_A 389 WICAINNISR 398 (407)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 412
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.00 E-value=8.3e-06 Score=82.47 Aligned_cols=69 Identities=17% Similarity=0.143 Sum_probs=51.8
Q ss_pred eEEeCCCCCCCCeEEEEecCCChhhhccCCCCC-CEEEEECCeecCCCCHHHHHHHHHH-cCcceEEEEEEec
Q psy4897 190 ISIKGGKENKMPILISKIFKGMAADQTEQLYVG-DAILSVNGEDLREATHDEAVKALKR-AGKLVELEVKYLR 260 (774)
Q Consensus 190 fsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~G-D~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~V~L~V~R~~ 260 (774)
++...+.....+++|..|.++|||+++| |++| |+|++|||++|.+++.... .+++. .++.+.|+|.|.+
T Consensus 6 ~~~~~~~~~~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~g~~v~l~v~R~~ 76 (209)
T 3rle_A 6 QSVEIPGGGTEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKANVEKPVKMLIYSSK 76 (209)
T ss_dssp --CCCTTSSSEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHHTTTSCEEEEEEETT
T ss_pred hhhhccCCCCCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhcCCCCEEEEEEEecC
Confidence 3333333345689999999999999998 9999 9999999999988643222 33333 6789999998864
No 413
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.99 E-value=1.4e-05 Score=93.16 Aligned_cols=69 Identities=14% Similarity=0.213 Sum_probs=55.8
Q ss_pred CCcccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHH--hcCceEEEEeeecc
Q psy4897 31 NNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALK--RAGKVVELEVGVGY 106 (774)
Q Consensus 31 ~~gLGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk--~ag~~V~L~V~R~~ 106 (774)
..+||+.+... +.|++|..|.+||||+++| |++||+|++|||++|. .. +...+++ +.|+.|+|+|.|++
T Consensus 484 ~~~lG~~~~~~---~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~-~~--~l~~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 484 RVNFGAKYKAS---PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQAT-EQ--SVKRILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp SCCCSEEEEEE---TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC-TT--THHHHHTTCCTTCEEEEEEEETT
T ss_pred ccccceEEecc---CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECC-HH--HHHHHHHhcCCCCEEEEEEEECC
Confidence 35899988643 3479999999999999998 9999999999999994 32 3344444 46899999999976
No 414
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.98 E-value=6.6e-06 Score=74.08 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=48.1
Q ss_pred CeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEecc
Q psy4897 201 PILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLRE 261 (774)
Q Consensus 201 pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~ 261 (774)
++.|..+.|+++|+++| |++||+|++|||++|.+ ..++..++.. .++.+.|+|.|.+.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~--~~d~~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTS--TTHHHHHHHHHTTCSEEEEEEEETTE
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCeEEEEEEECCE
Confidence 45677778888889998 99999999999999988 5677777764 57889999988654
No 415
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=97.97 E-value=7.6e-05 Score=72.60 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=61.0
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEee---eccC----CCCCcEEEEEEeCCCCceeeEEEEec
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRL---VSSS----RHSDVIVFSVRCGTPQGVATHHLRAE 530 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~---~~~s----~~~~~~~f~~~~~t~~g~~~~~~~~e 530 (774)
..+|+++|++|++..|+.|.+..... .|....+|-..+. +... .....++|.|.++. +++||.++
T Consensus 33 ~knWKkRwFVL~~~~L~Yyk~~~~~~----~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~----rt~~l~A~ 104 (164)
T 2lul_A 33 PLNYKERLFVLTKSMLTYYEGRAEKK----YRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDA----NTLYIFAP 104 (164)
T ss_dssp CCCEEEEEEEEESSEEEEECCCSSSC----CCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSS----CEEEEECS
T ss_pred CCCceeEEEEEECCEEEEEeccCccc----ccccEEEEeeeEEEEeccccccCcccccceeEEEecCC----cEEEEECC
Confidence 46799999999999999998764322 2333333333222 2221 12234899999885 58999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHH
Q psy4897 531 THRDLANWARTLVQATHSCVL 551 (774)
Q Consensus 531 t~~dl~~w~~~l~~~~~~~~~ 551 (774)
|..|+..|..+|.++|...-.
T Consensus 105 s~~e~~~Wi~aL~~~i~~n~~ 125 (164)
T 2lul_A 105 SPQSRDLWVKKLKEEIKNNNN 125 (164)
T ss_dssp SHHHHHHHHHHHHHHHTTCSC
T ss_pred CHHHHHHHHHHHHHHHHHChh
Confidence 999999999999999865443
No 416
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.97 E-value=5.5e-06 Score=90.25 Aligned_cols=58 Identities=28% Similarity=0.353 Sum_probs=50.4
Q ss_pred CCeEEEEecCCCHHhhhCCCCC-----------CCEEEEECCEecCCCCHHHHHHHHH--hcCceEEEEeeecc
Q psy4897 46 MPILISKIFKGMAADQTEQLYV-----------GDAILSVNGEDLREATHDEAVKALK--RAGKVVELEVGVGY 106 (774)
Q Consensus 46 ~gi~Vs~V~pGSpAaraG~Lqv-----------GD~ILsVNG~~V~~~sh~eaV~lLk--~ag~~V~L~V~R~~ 106 (774)
.|++|..|.++|||+++| |++ ||+|++|||++|.++. +...++. +.|+.|+|+|.|++
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~~--dl~~~l~~~~~g~~v~l~v~R~g 321 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNGS--DLYRILDQCKVGDEVTVEVLRGD 321 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSSH--HHHHHHTTCCTTCEEEEEEECSS
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCHH--HHHHHHHhCCCcCEEEEEEEECC
Confidence 589999999999999998 999 9999999999999884 4555554 45899999999876
No 417
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.93 E-value=1.7e-05 Score=89.01 Aligned_cols=58 Identities=28% Similarity=0.365 Sum_probs=52.6
Q ss_pred CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecc
Q psy4897 46 MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 46 ~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
.|++|..|.++|||+++| |++||+|++|||++|.++ .+.+.+++..+..+.|+|.|++
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~--~~~~~~l~~~~~~v~l~v~R~g 420 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNSI--AEMRKVLAAKPAIIALQIVRGN 420 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhCCCeEEEEEEECC
Confidence 589999999999999998 999999999999999865 7788888887779999999875
No 418
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=97.92 E-value=1.5e-05 Score=87.86 Aligned_cols=82 Identities=13% Similarity=0.183 Sum_probs=59.3
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHHH
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLAN 537 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~~ 537 (774)
...|+++||+|+++.|+.|.+ +. ..|....+|..+.+........++||.|.+++ |-++|+|.+||..|+..
T Consensus 294 ~~~WkkRwfvL~~~~L~y~k~-~~-----~~~~~~i~l~~~~v~~~~~~~r~~~F~i~t~~--~~~~~~l~A~s~~e~~~ 365 (385)
T 2q13_A 294 SSTWDRQFYFTQGGNLMSQAR-GD-----VAGGLAMDIDNCSVMAVDCEDRRYCFQITSFD--GKKSSILQAESKKDHEE 365 (385)
T ss_dssp --CCEEEEEEEETTEEEEECS-SC-----SSCEEEEECTTCEEEEECCTTCSSEEEEECTT--SCBCCCEECSSHHHHHH
T ss_pred cCCceeEEEEEECCEEEEecC-CC-----cCCCceEEccceEEEeccccCCCceEEEEeCC--CCeEEEEEeCCHHHHHH
Confidence 346999999999999999988 32 23444555544333222223334999999875 33689999999999999
Q ss_pred HHHHHHHHHH
Q psy4897 538 WARTLVQATH 547 (774)
Q Consensus 538 w~~~l~~~~~ 547 (774)
|..+|..+++
T Consensus 366 Wi~ai~~~~~ 375 (385)
T 2q13_A 366 WICTINNISK 375 (385)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 419
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.90 E-value=2.2e-05 Score=86.77 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=62.7
Q ss_pred CCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH-cCcceEEEEEEecc
Q psy4897 186 NGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR-AGKLVELEVKYLRE 261 (774)
Q Consensus 186 ~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~V~L~V~R~~~ 261 (774)
.++|+.+........+++|..|.+++||+++| |++||+|++|||+++.+++.+++..+|+. .+..|.|+|.|.+.
T Consensus 85 ~giG~~~~~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 85 TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp BBCSEEEEECTTCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEEEeecCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 46788776420113579999999999999998 99999999999999999888999998875 67889999988654
No 420
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.90 E-value=3.1e-05 Score=73.05 Aligned_cols=87 Identities=17% Similarity=0.308 Sum_probs=71.1
Q ss_pred CCCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeecc-CCCCCcEEEEEEeCCCCceeeEEEEecChhHH
Q psy4897 457 STDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS-SRHSDVIVFSVRCGTPQGVATHHLRAETHRDL 535 (774)
Q Consensus 457 ~~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~-s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl 535 (774)
....|+++|++|++..|+.|.+...+. ..|....+|--+++... +....+++|.+..++..|-..+||++||..++
T Consensus 24 tlK~~KrrWFvlk~~~L~YyK~kee~~---~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy 100 (137)
T 2ys3_A 24 TLKGYRQHWVVFKETTLSYYKSQDEAP---GDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQY 100 (137)
T ss_dssp CSSSSCCCEEEECSSCEEEESSTTTTT---SCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHH
T ss_pred ccccceeEEEEEeCCEEEEECCchhcc---CCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHH
Confidence 567899999999999999998877432 57777777777776554 22344589888888777889999999999999
Q ss_pred HHHHHHHHHHH
Q psy4897 536 ANWARTLVQAT 546 (774)
Q Consensus 536 ~~w~~~l~~~~ 546 (774)
+.|..++..|.
T Consensus 101 ~~WMaA~rlAs 111 (137)
T 2ys3_A 101 ARWMAGCRLAS 111 (137)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999886
No 421
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.87 E-value=1.8e-05 Score=85.29 Aligned_cols=58 Identities=22% Similarity=0.422 Sum_probs=50.3
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecc
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
..|++|..|.++|||+++| |++||+|++|||++|.++ .+...+++. ++.|.|+|.|++
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~~--~~l~~~l~~-~~~v~l~v~R~g 312 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNA--EDVYEAVRT-QSQLAVQIRRGR 312 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHTT-CSSEEEEEEETT
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCCH--HHHHHHHhC-CCeEEEEEEECC
Confidence 3589999999999999998 999999999999999865 555666665 688999999875
No 422
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=97.83 E-value=2.4e-05 Score=82.72 Aligned_cols=91 Identities=16% Similarity=0.276 Sum_probs=65.9
Q ss_pred CCCceEEEEEEeccceeEEecCCCCChhc-ccCcccccceeeEeeeccCC-CCCcEEEEEEeCCCCceeeEEEEecChhH
Q psy4897 457 STDRWVSIFGAVTERELRLYESAPWSPEA-WSTPAHVFPLVSTRLVSSSR-HSDVIVFSVRCGTPQGVATHHLRAETHRD 534 (774)
Q Consensus 457 ~~~~w~~~~~~l~~~~l~~y~~~p~~~~~-~~~~~~~~~l~~~r~~~~s~-~~~~~~f~~~~~t~~g~~~~~~~~et~~d 534 (774)
....|+.+||+|++..||+|.+.-....+ ...|....+|...-+..... ...+++|.|++..+ ..|+|.+++..|
T Consensus 35 ~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g---~~yLFQA~s~eE 111 (279)
T 3a8n_A 35 TRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLG---DAFLFQTTSQTE 111 (279)
T ss_dssp CCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTT---EEEECCCSCHHH
T ss_pred cCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEeccccCCCCcEEEEEcCCC---CEEEEeCCCHHH
Confidence 35789999999999999999986643222 45666667665444432222 23349999998744 789999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy4897 535 LANWARTLVQATHSCV 550 (774)
Q Consensus 535 l~~w~~~l~~~~~~~~ 550 (774)
|..|.++|..++....
T Consensus 112 m~~WI~aI~~a~~~~~ 127 (279)
T 3a8n_A 112 LENWITAIHSACAAAV 127 (279)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhc
Confidence 9999999999987544
No 423
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.83 E-value=3.4e-05 Score=82.86 Aligned_cols=61 Identities=16% Similarity=0.199 Sum_probs=54.5
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEeccc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLREV 262 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~~ 262 (774)
..+++|..|.+++||+++| |++||+|++|||+++.+ ..++..+|+. .++.+.|+|.|.++.
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 3679999999999999998 99999999999999987 7899999985 678999999987653
No 424
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.81 E-value=5.5e-05 Score=72.53 Aligned_cols=39 Identities=15% Similarity=0.445 Sum_probs=34.8
Q ss_pred cEEEEEEeCCCCceeeEEEEecChhHHHHHHHHHHHHHHH
Q psy4897 509 VIVFSVRCGTPQGVATHHLRAETHRDLANWARTLVQATHS 548 (774)
Q Consensus 509 ~~~f~~~~~t~~g~~~~~~~~et~~dl~~w~~~l~~~~~~ 548 (774)
.++|.|.+++. +-.+++|+++|..||.-|.++|..|+..
T Consensus 111 ~~vF~I~~~~~-~~~~~~laAds~Eem~dW~kaIreaa~~ 149 (150)
T 2fjl_A 111 LFVFSISMPSV-AQWSLDVAADSQEELQDWVKKIREVAQT 149 (150)
T ss_dssp SCEEEEECTTT-SSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEeCCCC-CCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 49999999865 6789999999999999999999998754
No 425
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.80 E-value=2.3e-05 Score=88.43 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=52.5
Q ss_pred CCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecc
Q psy4897 46 MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 46 ~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
.|++|..|.++|||+++| |++||+|++|||++|.++ .+...++++.++.+.|.|.|++
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~~--~~~~~~l~~~~~~v~l~v~R~g 443 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTDV--KSLQTIAQEKKKELLVQVLRGP 443 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHTTSSCSCEEEEEEETT
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHhcCCCeEEEEEEECC
Confidence 479999999999999998 999999999999999865 6778888888889999998875
No 426
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.80 E-value=3.3e-05 Score=84.16 Aligned_cols=61 Identities=21% Similarity=0.320 Sum_probs=55.1
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEeccc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLREV 262 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~~ 262 (774)
..+++|..|.++|||+++| |++||+|++|||++|.+ ..++...|.. .|+.+.|+|.|.++.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATTEPGTKVKLGLLRNGKP 324 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSC--HHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4689999999999999998 99999999999999987 8899999976 689999999997653
No 427
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.79 E-value=3.5e-05 Score=71.86 Aligned_cols=58 Identities=22% Similarity=0.259 Sum_probs=50.9
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEecc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLRE 261 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~ 261 (774)
..+++|..|.+++||+++ |++||+|++|||++|.+ ..++...++. .++.+.|+| |.++
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 357899999999999987 99999999999999987 7888888874 578899999 7665
No 428
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.78 E-value=5.6e-05 Score=81.24 Aligned_cols=72 Identities=19% Similarity=0.306 Sum_probs=59.9
Q ss_pred CCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEE-ecc
Q psy4897 186 NGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKY-LRE 261 (774)
Q Consensus 186 ~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R-~~~ 261 (774)
..+|+.+... +...+++|..|.+++||+++| |++||+|++|||+++.+ ..++...+.. .++.+.|+|.| .++
T Consensus 229 ~~lGi~~~~~-~~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 229 ASLGVQVTND-KDTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINS--ADALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp EECCEEEESC-SSSSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCS--HHHHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred cccceEeeec-cCCCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECCCC
Confidence 4577777542 224689999999999999998 99999999999999987 7888888875 57899999998 654
No 429
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=97.72 E-value=3.9e-05 Score=80.59 Aligned_cols=86 Identities=15% Similarity=0.211 Sum_probs=60.4
Q ss_pred ceEEEEEEeccc-------eeEEecCCCCChhcccCcccccceeeEeee-ccCCCCCcEEEEEEeCCCCceeeEEEEecC
Q psy4897 460 RWVSIFGAVTER-------ELRLYESAPWSPEAWSTPAHVFPLVSTRLV-SSSRHSDVIVFSVRCGTPQGVATHHLRAET 531 (774)
Q Consensus 460 ~w~~~~~~l~~~-------~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~-~~s~~~~~~~f~~~~~t~~g~~~~~~~~et 531 (774)
.|+++|++|++. .|+.|++.......-..|....+|-...-| ........++|.|.+.. ++|+|.+||
T Consensus 21 ~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~I~t~~----rty~l~A~s 96 (264)
T 1qqg_A 21 SMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHLVALYTRD----EHFAIAADS 96 (264)
T ss_dssp TCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCSSCSSEEEEEESS----CEEEEECSS
T ss_pred CCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccCCCCCcEEEEEECC----EEEEEEeCC
Confidence 489999999999 999999765300000245556665554322 22233445999999873 689999999
Q ss_pred hhHHHHHHHHHHHHHHHH
Q psy4897 532 HRDLANWARTLVQATHSC 549 (774)
Q Consensus 532 ~~dl~~w~~~l~~~~~~~ 549 (774)
..|+..|..+|.+++...
T Consensus 97 e~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 97 EAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp HHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999887654
No 430
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.69 E-value=6.1e-05 Score=81.21 Aligned_cols=59 Identities=22% Similarity=0.414 Sum_probs=53.1
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEecc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
..+++|..|.+++||+++| |++||+|++|||++|.+ .+++.++++. ++.+.|+|.|.++
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~-~~~v~l~v~R~g~ 313 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRE 313 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT-CSSEEEEEEETTE
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC-CCeEEEEEEECCE
Confidence 3589999999999999998 99999999999999987 7888888876 6899999998765
No 431
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.62 E-value=4.7e-05 Score=84.62 Aligned_cols=73 Identities=19% Similarity=0.267 Sum_probs=56.6
Q ss_pred CCCcceEEeCCCCCC--CCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEecc
Q psy4897 185 NNGLGISIKGGKENK--MPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLRE 261 (774)
Q Consensus 185 ~~~LGfsi~gg~~~~--~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~ 261 (774)
..++||.+....+.. ..++|..|.++|||+++| |++||+|++|||++|.++. +..+|+..+..|+|+|.|.+.
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 345666655332211 247899999999999998 9999999999999999864 556666678899999988765
No 432
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=97.60 E-value=0.00018 Score=79.97 Aligned_cols=88 Identities=15% Similarity=0.321 Sum_probs=66.3
Q ss_pred CCceEEEEEEec-cceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHH
Q psy4897 458 TDRWVSIFGAVT-ERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLA 536 (774)
Q Consensus 458 ~~~w~~~~~~l~-~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~ 536 (774)
...|+++|++|+ ++.|+.|.+.|.+......|+..+.+....+... +....++|.+++.....+..+.|.+++..|..
T Consensus 19 ~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~-~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e 97 (446)
T 4ejn_A 19 IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKT-ERPRPNTFIIRCLQWTTVIERTFHVETPEERE 97 (446)
T ss_dssp TTEEEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEE-CSSSTTEEEEEEEETTEEEEEEEECSSHHHHH
T ss_pred cccccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCC-CCCCCceeEEEcCCCceeeeeEEecCCHHHHH
Confidence 568999999997 8999999999988888888999987765443332 22224799999887767777899999999999
Q ss_pred HHHHHHHHHH
Q psy4897 537 NWARTLVQAT 546 (774)
Q Consensus 537 ~w~~~l~~~~ 546 (774)
.|..+|.+++
T Consensus 98 ~W~~ai~~~i 107 (446)
T 4ejn_A 98 EWTTAIQTVA 107 (446)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhh
Confidence 9999999885
No 433
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.59 E-value=7.1e-05 Score=81.43 Aligned_cols=60 Identities=25% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCeEEEEecCCChhhhccCCCC-----------CCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEeccc
Q psy4897 200 MPILISKIFKGMAADQTEQLYV-----------GDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLREV 262 (774)
Q Consensus 200 ~pi~Is~V~pgspA~~aG~L~~-----------GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~~ 262 (774)
.+++|..|.+++||+++| |++ ||+|++|||++|.+ .+++...|.. .|+.++|+|.|.++.
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSN--GSDLYRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSS--SHHHHHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCC--HHHHHHHHHhCCCcCEEEEEEEECCEE
Confidence 589999999999999998 999 99999999999988 6788888865 578999999987653
No 434
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.55 E-value=1.1e-05 Score=87.21 Aligned_cols=58 Identities=22% Similarity=0.336 Sum_probs=0.0
Q ss_pred CCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecc
Q psy4897 45 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 45 ~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
..|++|..|.++|||+++| |++||+|++|||++|.++. +...+++. ++.|+|+|.|++
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~--~~~~~l~~-~~~v~l~v~R~g 310 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSAN--DVSDVIKR-ESTLNMVVRRGN 310 (332)
T ss_dssp --------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCHH--HHHHHHhC-CCeEEEEEEECC
Confidence 3589999999999999998 9999999999999998764 44455554 788999998875
No 435
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.53 E-value=9e-05 Score=86.36 Aligned_cols=70 Identities=17% Similarity=0.284 Sum_probs=57.1
Q ss_pred CCcceEEeCCCCCCCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHH--cCcceEEEEEEeccc
Q psy4897 186 NGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKR--AGKLVELEVKYLREV 262 (774)
Q Consensus 186 ~~LGfsi~gg~~~~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~--~g~~V~L~V~R~~~~ 262 (774)
..+|+.+... ..+++|..|.++|||+++| |++||+|++|||++|. ..++.++|+. .|+.|.|+|.|.++.
T Consensus 485 ~~lG~~~~~~---~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~---~~~l~~~l~~~~~g~~v~l~v~R~g~~ 556 (597)
T 4fgm_A 485 VNFGAKYKAS---PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQAT---EQSVKRILERYIPGDTVTIHAFRRDEL 556 (597)
T ss_dssp CCCSEEEEEE---TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC---TTTHHHHHTTCCTTCEEEEEEEETTEE
T ss_pred cccceEEecc---CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECC---HHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4688877542 3479999999999999998 9999999999999994 3566666664 688999999997653
No 436
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=97.44 E-value=0.00054 Score=72.40 Aligned_cols=90 Identities=8% Similarity=0.051 Sum_probs=59.2
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhc--c--cCcccccceeeEeeec-cCCCCCcEEEEEEeCCCC--ceeeEEEEec
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEA--W--STPAHVFPLVSTRLVS-SSRHSDVIVFSVRCGTPQ--GVATHHLRAE 530 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~--~--~~~~~~~~l~~~r~~~-~s~~~~~~~f~~~~~t~~--g~~~~~~~~e 530 (774)
..+|+++|++|++..||+|..-. +++. + ..++..+.+|...=.+ .-.....+||+|+++..+ ....|||++|
T Consensus 171 ~k~WkkRyfvLr~sgLyy~~K~~-sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~cae 249 (281)
T 4gmv_A 171 KKSWKKRYFLLRASGIYYVPKGK-AKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCD 249 (281)
T ss_dssp SSCEEEEEEEECSSCEEEC----------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECS
T ss_pred CCCCeEEEEEEeCCEEEEEeCCC-CCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeC
Confidence 46899999999999999888753 3333 1 2356676666542000 011122499999986432 2347999999
Q ss_pred ChhHHHHHHHHHHHHHHH
Q psy4897 531 THRDLANWARTLVQATHS 548 (774)
Q Consensus 531 t~~dl~~w~~~l~~~~~~ 548 (774)
+.+++..|..+|--|-|.
T Consensus 250 de~~~~~Wv~Air~ak~g 267 (281)
T 4gmv_A 250 DVRTLHQWVNGIRIAKYG 267 (281)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhhC
Confidence 999999999999988764
No 437
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=97.38 E-value=0.00071 Score=70.63 Aligned_cols=91 Identities=9% Similarity=0.065 Sum_probs=62.9
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhccc----CcccccceeeEeeecc-CCCCCcEEEEEEeCCCCc--eeeEEEEec
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWS----TPAHVFPLVSTRLVSS-SRHSDVIVFSVRCGTPQG--VATHHLRAE 530 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~----~~~~~~~l~~~r~~~~-s~~~~~~~f~~~~~t~~g--~~~~~~~~e 530 (774)
.++|+++|++|+++.||+|...- +++... .++..+.++...-.+. -.....+||+|++...+. ...|||++|
T Consensus 145 ~K~WkkRyfvLr~sgLy~~~k~~-sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcae 223 (256)
T 3hk0_A 145 KKSWKKLYVCLRRSGLYCSTKGT-SAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAE 223 (256)
T ss_dssp SSCEEEEEEEEETTEEEEESSTT-CCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEES
T ss_pred CCcceEEEEEEeCCEEEEEecCC-CCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeC
Confidence 57899999999999999998665 444322 3566666664320000 011123999999764311 236999999
Q ss_pred ChhHHHHHHHHHHHHHHHH
Q psy4897 531 THRDLANWARTLVQATHSC 549 (774)
Q Consensus 531 t~~dl~~w~~~l~~~~~~~ 549 (774)
+..++..|..+|-.|-|-.
T Consensus 224 de~~~~~W~~aIr~ak~g~ 242 (256)
T 3hk0_A 224 DEQTRTSWMTAFRLLKYGM 242 (256)
T ss_dssp SHHHHHHHHHHHHHHHHTH
T ss_pred CHHHHHHHHHHHHHHHhhH
Confidence 9999999999999887643
No 438
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=97.38 E-value=0.00036 Score=64.25 Aligned_cols=85 Identities=19% Similarity=0.346 Sum_probs=57.6
Q ss_pred ceEEEEEEeccceeEEecCCCCChhcccCccccccee---eEeeeccC-----CCCC-cEEEEEEeCCC--CceeeEEEE
Q psy4897 460 RWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLV---STRLVSSS-----RHSD-VIVFSVRCGTP--QGVATHHLR 528 (774)
Q Consensus 460 ~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~---~~r~~~~s-----~~~~-~~~f~~~~~t~--~g~~~~~~~ 528 (774)
.|+++||+|++..|++|+..+.. .-..|.....|- ..+-|.++ ...+ .+.|.|.+... ..-+++||.
T Consensus 19 ~Wkkr~~vL~~~kL~~y~~~~~~--~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~ 96 (117)
T 2rov_A 19 GWVKKYVIVSSKKILFYDSEQDK--EQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLL 96 (117)
T ss_dssp CCCEEEEEEETTEEEEESCHHHH--HTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEE
T ss_pred CcEEEEEEEECCEEEEEECCCCc--ccCCceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEE
Confidence 79999999999999999985421 123555555542 12323221 1111 27899987421 123799999
Q ss_pred ecChhHHHHHHHHHHHHH
Q psy4897 529 AETHRDLANWARTLVQAT 546 (774)
Q Consensus 529 ~et~~dl~~w~~~l~~~~ 546 (774)
+++..|+..|..+|..++
T Consensus 97 A~s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 97 ANSTEEQQKWVSRLVKKI 114 (117)
T ss_dssp CSSHHHHHHHHHHHHHHC
T ss_pred eCCHHHHHHHHHHHHHHh
Confidence 999999999999998654
No 439
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.35 E-value=2.8e-05 Score=83.98 Aligned_cols=60 Identities=20% Similarity=0.283 Sum_probs=0.0
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCCHHHHHHHHHHcCcceEEEEEEeccc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLREV 262 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~~g~~V~L~V~R~~~~ 262 (774)
..+++|..|.+++||+++| |++||+|++|||+++.+ .+++..+++. ++.++|+|.|.++.
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g~~ 312 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVS--ANDVSDVIKR-ESTLNMVVRRGNED 312 (332)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECCEE
Confidence 3578999999999999998 99999999999999976 6788888876 77899999987653
No 440
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.27 E-value=4e-05 Score=86.39 Aligned_cols=69 Identities=22% Similarity=0.339 Sum_probs=0.0
Q ss_pred ccEEEEccCCCCCCeEEEEecCCCHHhhhCCCCCCCEEEEECCEecCCCCHHHHHHHHHhcCceEEEEeeecc
Q psy4897 34 LGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGY 106 (774)
Q Consensus 34 LGfsI~GG~e~~~gi~Vs~V~pGSpAaraG~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~ag~~V~L~V~R~~ 106 (774)
+|+.+..- ....|++|..|.++|||+++| |++||+|++|||++|.++ .+...++++.+..+.|+|.|+.
T Consensus 372 ~G~~l~~~-~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~~--~~l~~~l~~~~~~v~l~v~R~g 440 (448)
T 1ky9_A 372 EGAEMSNK-GKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKNI--AELRKVLDSKPSVLALNIQRGD 440 (448)
T ss_dssp -------------------------------------------------------------------------
T ss_pred cceEeecc-CCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHcCCCeEEEEEEECC
Confidence 46665421 223579999999999999998 999999999999999965 5667777766568889998865
No 441
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=97.20 E-value=0.00099 Score=64.53 Aligned_cols=87 Identities=15% Similarity=0.264 Sum_probs=71.0
Q ss_pred CCCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeecc-CCCCCcEEEEEEeCCCCceeeEEEEecChhHH
Q psy4897 457 STDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS-SRHSDVIVFSVRCGTPQGVATHHLRAETHRDL 535 (774)
Q Consensus 457 ~~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~-s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl 535 (774)
.-..|+++|+++||..|++|.+.-. ++..|....+|-.+.|... +....+++|.+.-+...|...+|+|.|+..+.
T Consensus 62 tLKgyKryWFv~kd~~LsyYKskEe---~~geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qy 138 (173)
T 4f7h_A 62 TLKGYKQYWCTFKDTSISCYKSKEE---SSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQY 138 (173)
T ss_dssp BCCCCEEEEEEEETTEEEEESCGGG---CSSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHH
T ss_pred ccccceeEEEEEeCCEEEEEcCHhH---hcCCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHH
Confidence 4688999999999999999998764 3678988888887776653 44455677777667677999999999999999
Q ss_pred HHHHHHHHHHH
Q psy4897 536 ANWARTLVQAT 546 (774)
Q Consensus 536 ~~w~~~l~~~~ 546 (774)
+.|..++.-|.
T Consensus 139 a~WMAAcrLAs 149 (173)
T 4f7h_A 139 AHWMAACRLAS 149 (173)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhhhc
Confidence 99999887765
No 442
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=97.15 E-value=0.0012 Score=63.32 Aligned_cols=87 Identities=10% Similarity=0.182 Sum_probs=70.6
Q ss_pred CCCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeecc-CCCCCcEEEEEEeCCCCceeeEEEEecChhHH
Q psy4897 457 STDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS-SRHSDVIVFSVRCGTPQGVATHHLRAETHRDL 535 (774)
Q Consensus 457 ~~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~-s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl 535 (774)
.-..|+++|++++|..|++|.+.-. ++..|...++|-.+-|... +...+++.|.+.-++..|...+||+.||..+.
T Consensus 41 tLKgfKryWfv~kDt~LsyYKSkEe---~~geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QY 117 (165)
T 4bbk_A 41 MLKACKQYWFVFKDTSIAYFKNKEL---EQGEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQY 117 (165)
T ss_dssp ---CCEEEEEEEETTEEEEESSGGG---TTSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHH
T ss_pred ccccceeEEEEEeCCEEEEEcCHHH---hcCCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHH
Confidence 4588999999999999999998764 3678988888877776543 44556788888878888999999999999999
Q ss_pred HHHHHHHHHHH
Q psy4897 536 ANWARTLVQAT 546 (774)
Q Consensus 536 ~~w~~~l~~~~ 546 (774)
+.|..++.-|.
T Consensus 118 a~WMAAcrLAs 128 (165)
T 4bbk_A 118 ARWMAACILAS 128 (165)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhhcc
Confidence 99999887765
No 443
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.00 E-value=0.0011 Score=81.59 Aligned_cols=70 Identities=14% Similarity=0.205 Sum_probs=57.3
Q ss_pred CCcccEEEEccCCCCCCeEEEEecCC--------CHHhhhC-CCCCCCEEEEECCEecCCCCHHHHHHHHHh-cCceEEE
Q psy4897 31 NNGLGISIKGGKENKMPILISKIFKG--------MAADQTE-QLYVGDAILSVNGEDLREATHDEAVKALKR-AGKVVEL 100 (774)
Q Consensus 31 ~~gLGfsI~GG~e~~~gi~Vs~V~pG--------SpAaraG-~LqvGD~ILsVNG~~V~~~sh~eaV~lLk~-ag~~V~L 100 (774)
.+++|+.+.- ...+++|..|.+| |||+++| .|+ ||+|++|||+++.++. +++.+++. .|+.|+|
T Consensus 736 ~~g~G~~~~~---~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l 809 (1045)
T 1k32_A 736 SGRIACDFKL---DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARI 809 (1045)
T ss_dssp CCBCSEEEEE---ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEE
T ss_pred cceecEEEEE---eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEE
Confidence 4589988863 2357999999998 9999996 399 9999999999999886 45666664 5889999
Q ss_pred Eeeecc
Q psy4897 101 EVGVGY 106 (774)
Q Consensus 101 ~V~R~~ 106 (774)
+|.|..
T Consensus 810 ~v~r~~ 815 (1045)
T 1k32_A 810 RLSGKG 815 (1045)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 999865
No 444
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=96.92 E-value=0.0013 Score=72.55 Aligned_cols=87 Identities=11% Similarity=0.156 Sum_probs=57.4
Q ss_pred CCceEEEEEEe--ccceeEEecCCCCChhcccCcccccceeeEeeecc-CCCCCcEEEEEEeCCCCceeeEEEEecChhH
Q psy4897 458 TDRWVSIFGAV--TERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSS-SRHSDVIVFSVRCGTPQGVATHHLRAETHRD 534 (774)
Q Consensus 458 ~~~w~~~~~~l--~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~-s~~~~~~~f~~~~~t~~g~~~~~~~~et~~d 534 (774)
...|+++|+|| ++..|+.|.+... ..|....+|-...++.. ......++|.|......+-+++||.+++..|
T Consensus 159 ~k~WkrRwFVL~~~~~~L~Yy~~~~~-----~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e 233 (386)
T 3lju_X 159 NGQFLSRKFVLTEREGALKYFNRNDA-----KEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKE 233 (386)
T ss_dssp SCCEEEEEEEEETTTTEEEEEC----------CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEEEEEECSSHHH
T ss_pred cCCceEEEEEEEcCCCEEEEECCCCc-----cCcccEEEeeccEEEEcccccCCCceEEEEEecCCCceEEEEEcCCHHH
Confidence 46799999999 9999999998753 45555555554332221 1123347777762111134899999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy4897 535 LANWARTLVQATHSC 549 (774)
Q Consensus 535 l~~w~~~l~~~~~~~ 549 (774)
+..|.++|..+....
T Consensus 234 ~~~Wi~aIr~a~~~~ 248 (386)
T 3lju_X 234 IVDWFNALRAARFHY 248 (386)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhccccc
Confidence 999999998886544
No 445
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.82 E-value=0.0088 Score=55.50 Aligned_cols=84 Identities=15% Similarity=0.237 Sum_probs=54.8
Q ss_pred CCceEEEEEEeccc------eeEEecCCCCChhcccCcccccceeeE-eeecc----CCCCCcEEEEEEeCCCCceeeEE
Q psy4897 458 TDRWVSIFGAVTER------ELRLYESAPWSPEAWSTPAHVFPLVST-RLVSS----SRHSDVIVFSVRCGTPQGVATHH 526 (774)
Q Consensus 458 ~~~w~~~~~~l~~~------~l~~y~~~p~~~~~~~~~~~~~~l~~~-r~~~~----s~~~~~~~f~~~~~t~~g~~~~~ 526 (774)
.++|+++|++|... -|-+|++.--. --...|..+-.|-++ +|... +.+.+.++|.|.|.. ++|+
T Consensus 27 gkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~-~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~e----r~~~ 101 (127)
T 2d9w_A 27 GKKWRRFGASLYGGSDCALARLELQEGPEKP-RRCEAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKE----RLYL 101 (127)
T ss_dssp SCBCCEEEEEEECCSSSSCCEEEEECCCSCS-SSCSCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESS----CEEE
T ss_pred hhhhheeEEEEecCCCCCceeeeeeeccCcc-ccCCCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCC----cEEE
Confidence 45688888888764 47778886421 111233344434332 33222 334667999999985 5999
Q ss_pred EEecChhHHHHHHHHHHHHHH
Q psy4897 527 LRAETHRDLANWARTLVQATH 547 (774)
Q Consensus 527 ~~~et~~dl~~w~~~l~~~~~ 547 (774)
|++|+. ++..|..+|.+-++
T Consensus 102 laAe~~-E~~~Wi~~ic~~aF 121 (127)
T 2d9w_A 102 LAAPAA-ERGDWVQAICLLAF 121 (127)
T ss_dssp EEECHH-HHHHHHHHHHHHHT
T ss_pred EEeCcH-HHHHHHHHHHHHhc
Confidence 999975 99999999977654
No 446
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.29 E-value=0.0048 Score=75.78 Aligned_cols=70 Identities=14% Similarity=0.194 Sum_probs=57.1
Q ss_pred CCCcceEEeCCCCCCCCeEEEEecCC--------Chhhhcc-CCCCCCEEEEECCeecCCCCHHHHHHHHHH-cCcceEE
Q psy4897 185 NNGLGISIKGGKENKMPILISKIFKG--------MAADQTE-QLYVGDAILSVNGEDLREATHDEAVKALKR-AGKLVEL 254 (774)
Q Consensus 185 ~~~LGfsi~gg~~~~~pi~Is~V~pg--------spA~~aG-~L~~GD~IlaVNG~~V~~~t~~e~v~~Lk~-~g~~V~L 254 (774)
..++|+.+... ..+++|..|.++ +||+++| .|+ ||+|++|||+++.++. +++.+|+. .|..|.|
T Consensus 736 ~~g~G~~~~~~---~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l 809 (1045)
T 1k32_A 736 SGRIACDFKLD---GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARI 809 (1045)
T ss_dssp CCBCSEEEEEE---TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEE
T ss_pred cceecEEEEEe---CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEE
Confidence 34778777542 346899999998 9999996 399 9999999999999864 77888886 7889999
Q ss_pred EEEEec
Q psy4897 255 EVKYLR 260 (774)
Q Consensus 255 ~V~R~~ 260 (774)
+|.|.+
T Consensus 810 ~v~r~~ 815 (1045)
T 1k32_A 810 RLSGKG 815 (1045)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 998864
No 447
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.99 E-value=0.0065 Score=69.77 Aligned_cols=63 Identities=17% Similarity=0.185 Sum_probs=49.6
Q ss_pred CCCeEEEEecCCChhhhccCCCCCCEEEEECCeecCCCC--------HHHHHHHHHH--cCcceEEEEEEecccc
Q psy4897 199 KMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREAT--------HDEAVKALKR--AGKLVELEVKYLREVT 263 (774)
Q Consensus 199 ~~pi~Is~V~pgspA~~aG~L~~GD~IlaVNG~~V~~~t--------~~e~v~~Lk~--~g~~V~L~V~R~~~~~ 263 (774)
..|++|..|.+++||++ + |++||+|++|||+.|.+.. ..++..++.. .|+.|.|+|.|.++..
T Consensus 276 ~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~ 348 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHK 348 (539)
T ss_dssp SBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred cCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEE
Confidence 46899999999999986 4 9999999999999996531 1123445544 7899999999987643
No 448
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=95.10 E-value=0.025 Score=57.58 Aligned_cols=53 Identities=13% Similarity=0.204 Sum_probs=39.6
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhh
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHV 359 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~ 359 (774)
+.+++.-|.... ....+.++|+|..+ .++.+|+|++.+++.+|++||..++..
T Consensus 104 g~I~L~~~~~v~---~~~~k~~~F~I~t~--~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 104 GTVEVRSAKEII---DNTNKENGIDIIMA--DRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp EEEEGGGCSEEE---EETTTTSEEEEECS--SCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEEEcCCCEEec---cCCCCCcEEEEEcC--CcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 345554444332 12347789999874 468999999999999999999999974
No 449
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=94.88 E-value=0.041 Score=50.82 Aligned_cols=59 Identities=19% Similarity=0.368 Sum_probs=45.0
Q ss_pred cCcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhh
Q psy4897 301 TRYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLT 361 (774)
Q Consensus 301 ~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~ 361 (774)
.+.|++.-|.+... .....+.++|+|..++++ .++++|++.+++.+|++||..+|..+.
T Consensus 69 ~g~I~L~~~~v~~~-~~~~kr~~~F~l~t~~~~-~yl~qA~s~~e~~~Wi~aI~~~i~~~~ 127 (129)
T 2p0d_A 69 ESSVDLRGAALAHG-RHLSSRRNVLHIRTIPGH-EFLLQSDHETELRAWHRALRTVIERLV 127 (129)
T ss_dssp SEEEECTTCEEEEC-TTSCSSSSEEEEECTTSC-EEEEECSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEeCCcEEEEC-CCCCCCCcEEEEEcCCCC-EEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 34566666665541 222347789999988776 688999999999999999999998653
No 450
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=94.33 E-value=0.44 Score=48.29 Aligned_cols=129 Identities=13% Similarity=0.204 Sum_probs=78.9
Q ss_pred CCCceEEEEEEecc----c---eeEEecCCCCChhccc--CcccccceeeE-eeeccCCCCCc-EEEEEEeCCCCceeeE
Q psy4897 457 STDRWVSIFGAVTE----R---ELRLYESAPWSPEAWS--TPAHVFPLVST-RLVSSSRHSDV-IVFSVRCGTPQGVATH 525 (774)
Q Consensus 457 ~~~~w~~~~~~l~~----~---~l~~y~~~p~~~~~~~--~~~~~~~l~~~-r~~~~s~~~~~-~~f~~~~~t~~g~~~~ 525 (774)
..++|+++|+||+- . .|.+|..-. +-|. .+-.+.+|-.. .|-......++ ++++|-|.+ .+.
T Consensus 19 ~~KkWk~rw~vlrk~s~~adcl~L~vYkd~~---dr~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d----~~~ 91 (224)
T 3ml4_A 19 DGKKWKSRWLVLRKPSPVADCLLMLVYKDKC---ERSKGLRERSSLTLEDICGLEPALPYEGLAHTLAIICLS----QAV 91 (224)
T ss_dssp ---CCEEEEEEEECSSTTSSCEEEEEESSSH---HHHSCCCCSEEEEECCEEEEEEEEEETTEEEEEEEEESS----CEE
T ss_pred cCCceeeEEEEEEcCCCchheEEEEEEcChh---hhhcCCcccceeehHHhcCccccccccCcccEEEEEecC----cEE
Confidence 46799999999985 2 577785433 3333 22233333331 22222223333 899999886 477
Q ss_pred EEEecChhHHHHHHHHHHHHHHHHHHhccce-EEEEEe------cCeeeEEEEEecCceEEeecccCCCCCCCceeeccc
Q psy4897 526 HLRAETHRDLANWARTLVQATHSCVLNQRQV-SVRCMY------RGQPSQLIVNYDFGFRLLEATAGSMGREPKILWTYP 598 (774)
Q Consensus 526 ~~~~et~~dl~~w~~~l~~~~~~~~~~~~~~-~~~c~~------~~~~~~l~~~~~~gf~l~~~~~~~~~~~~~~l~~~~ 598 (774)
.|+.|+...|..|...|.. ...|. .|.+.. ..-+|.|.|+. ..|.|.+. ..+.+|...|
T Consensus 92 vLAFds~e~l~~W~~~l~~-------slGe~~rF~V~v~Ps~kL~sG~a~Lhl~~-~~l~L~~~------~~~~~l~~W~ 157 (224)
T 3ml4_A 92 MLGFDSHEAMCAWDTRIRY-------ALGEVHRFHVTVAPGTKLESGPATLHLCN-DILVLARD------IPPTVMGQWK 157 (224)
T ss_dssp EEECSSHHHHHHHHHHHHH-------HTSSEEEEEEEECSSSSSCCEEEEEEEET-TEEEEEET------TTTEEEEEEE
T ss_pred EEEeCCHHHHHHHHHHHhh-------ccCCCceEEEEecCccccCCCcEEEEecC-CcEEEccC------CCccEEEEcc
Confidence 9999999999999997754 33333 455432 33355555544 45666644 4577899999
Q ss_pred cccccccc
Q psy4897 599 FERLRMSS 606 (774)
Q Consensus 599 f~~l~~ss 606 (774)
..-||-=.
T Consensus 158 L~~LRRYG 165 (224)
T 3ml4_A 158 LSDLRRYG 165 (224)
T ss_dssp GGGEEEEE
T ss_pred hHHhhhhc
Confidence 99998654
No 451
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=94.10 E-value=0.063 Score=49.99 Aligned_cols=60 Identities=12% Similarity=0.159 Sum_probs=46.4
Q ss_pred cCcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhhH
Q psy4897 301 TRYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLTL 362 (774)
Q Consensus 301 ~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~~ 362 (774)
.+.+|+.-+.+. .....++.++|+|..++......++|.+.+++.+|++||+.++...-+
T Consensus 57 ~~~i~L~g~~V~--~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~~ 116 (126)
T 2dtc_A 57 GKKVSIVGWMVQ--LPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSRP 116 (126)
T ss_dssp SEEEECTTCEEE--CCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCCC
T ss_pred CceEEeCCCEEE--ecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCCC
Confidence 456777766664 233334889999998855567999999999999999999999985443
No 452
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=93.94 E-value=0.066 Score=49.06 Aligned_cols=61 Identities=11% Similarity=0.162 Sum_probs=44.7
Q ss_pred cCcccceeeEeeecccccCCCCceEEEecCCC-ceeEEEeeCChHhHHHHHHHHHHHhhhhh
Q psy4897 301 TRYLPLQLCYLVRNYKHYDSENRTLELHSPDG-VHSCILRASDASEASLWFNTLHSTLHVLT 361 (774)
Q Consensus 301 ~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg-~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~ 361 (774)
.+.|++.-|.+..-......+.++|.|..++. .+.+++.|++.+++.+|++||..++....
T Consensus 61 ~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~~ 122 (124)
T 2w2x_D 61 RGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKID 122 (124)
T ss_dssp SEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC---
T ss_pred ccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhhc
Confidence 46677777776653222345778999987765 56789999999999999999998886543
No 453
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=93.69 E-value=0.1 Score=47.33 Aligned_cols=40 Identities=23% Similarity=0.431 Sum_probs=34.8
Q ss_pred CCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhh
Q psy4897 320 SENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVL 360 (774)
Q Consensus 320 ~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l 360 (774)
++.++|.|...+++ .++++|++.+++.+|++||..+|..+
T Consensus 82 kr~~~F~l~t~~~~-~~lfqA~s~~e~~~Wi~ai~~~i~~~ 121 (122)
T 1dro_A 82 KKKHVLRVKLANGA-LFLLQAHDDTEMSQWVTSLKAQSDST 121 (122)
T ss_dssp SSTTEEEEECSSSC-EEEEECSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCeEEEEEEcCCC-EEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 47899999976665 78899999999999999999998753
No 454
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=93.49 E-value=0.12 Score=47.37 Aligned_cols=56 Identities=21% Similarity=0.305 Sum_probs=41.4
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
..+++.-|.+........++.+.|.|..+++. .+++++++.+++.+|++||..+|.
T Consensus 68 ~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~-~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 68 YTVELRGATLSWAPKDKSSRKNVLELRSRDGS-EYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp EEEECTTCEEEECCGGGCSSSSEEEEECTTSC-EEEEECSCHHHHHHHHHHHHHHHC
T ss_pred ceEEcCCCEEEecccccCCCceEEEEECCCCC-EEEEECCCHHHHHHHHHHHHHHHh
Confidence 34455545444311123457889999988876 689999999999999999999885
No 455
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=93.18 E-value=0.12 Score=56.99 Aligned_cols=58 Identities=16% Similarity=0.343 Sum_probs=45.9
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhh
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLT 361 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~ 361 (774)
..+++..|.+.. .....|++||+|..+++.++++|++++.+++..|++||..++..+.
T Consensus 344 ~~~~l~~~~v~~--~~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~~ 401 (407)
T 4h8s_A 344 LIQDLDNCSVMA--VDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQIY 401 (407)
T ss_dssp CCBCSSCCEEEE--ECCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC-
T ss_pred eEEECCceEEEE--CCCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHhh
Confidence 345667776532 2334478899999999988999999999999999999999887553
No 456
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=92.88 E-value=0.15 Score=45.18 Aligned_cols=57 Identities=11% Similarity=0.281 Sum_probs=40.8
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhh
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHV 359 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~ 359 (774)
+.+++.-+.+.........++++|.|...++ ++.+++|++.+++.+|++||..++..
T Consensus 46 g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~-r~~~l~a~s~~e~~~Wi~ai~~~~~~ 102 (113)
T 1pls_A 46 GMIPLKGSTLTSPCQDFGKRMFVFKITTTKQ-QDHFFQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp EEEESSSCCEESSCCSSCCSSSEEEEEETTT-EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEcCCCEEEEecCCCCCCccEEEEEcCCC-CEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 3445544444332222344778999988764 58999999999999999999988763
No 457
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=92.83 E-value=0.2 Score=46.75 Aligned_cols=62 Identities=23% Similarity=0.298 Sum_probs=45.3
Q ss_pred cccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhhHHHHHH
Q psy4897 303 YLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLTLKSIAE 367 (774)
Q Consensus 303 ~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~~~~~~~ 367 (774)
.|++.-|.+.. .....+.++|.|..++. +.++|+|++.+++.+|++||..+|.....+.+.+
T Consensus 72 ~I~L~~~~~~~--~~~~~~~~~F~i~~~~~-r~~~l~A~s~~e~~~Wi~al~~ai~~~~~~~~~~ 133 (150)
T 1wg7_A 72 SIFLDSCMGVV--QNNKVRRFAFELKMQDK-SSYLLAADSEVEMEEWITILNKILQLNFEAAMQE 133 (150)
T ss_dssp EECTTTCCEEC--CCCSSCTTEEEEECSSS-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccCEEEe--cCCCCCceEEEEEeCCC-cEEEEEeCCHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 44444444443 12245788999999874 5899999999999999999999998655554443
No 458
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=92.82 E-value=0.16 Score=46.24 Aligned_cols=81 Identities=11% Similarity=0.056 Sum_probs=54.3
Q ss_pred EEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCC-cEEEEEEeCCCCceeeEEEEecChhHHHHHHHHH
Q psy4897 464 IFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSD-VIVFSVRCGTPQGVATHHLRAETHRDLANWARTL 542 (774)
Q Consensus 464 ~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~-~~~f~~~~~t~~g~~~~~~~~et~~dl~~w~~~l 542 (774)
.|+.+.| .++|.++-.++....+-...|||....++.-..... +++|.|+++. ++|.|++||..|...|..+|
T Consensus 29 ~~FLfND--~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~----~s~~~~aes~~eK~~Wl~~~ 102 (113)
T 1zc3_B 29 HGFLMND--CLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFP----ESRIFQAENAKIKREWLEVL 102 (113)
T ss_dssp EEEEESS--EEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEEETT----EEEEEECSSHHHHHHHHHHH
T ss_pred EEEecCC--EEEEEEEeccCcccEEEEEEEEcccCEEEECCCCcccceEEEEEeCC----ceEEEEcCCHHHHHHHHHHH
Confidence 3555554 777777644433323444456666555554222222 4999999763 68999999999999999999
Q ss_pred HHHHHHHH
Q psy4897 543 VQATHSCV 550 (774)
Q Consensus 543 ~~~~~~~~ 550 (774)
-+|.....
T Consensus 103 ~~a~~~~~ 110 (113)
T 1zc3_B 103 EETKRALS 110 (113)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99986544
No 459
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=92.67 E-value=0.2 Score=44.22 Aligned_cols=57 Identities=19% Similarity=0.258 Sum_probs=42.1
Q ss_pred CcccceeeEeeecccc-cCCCCceEEEecCC------CceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 302 RYLPLQLCYLVRNYKH-YDSENRTLELHSPD------GVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~-~d~r~r~FeL~s~d------g~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
+.+++.-|.+...... .+.+.++|+|..++ ..+.++|+|++.+++.+|++||..++.
T Consensus 49 g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 49 GCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp EEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 4556655554432221 23467899998864 567899999999999999999999886
No 460
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=92.63 E-value=0.16 Score=45.89 Aligned_cols=41 Identities=20% Similarity=0.406 Sum_probs=35.5
Q ss_pred CCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhh
Q psy4897 319 DSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVL 360 (774)
Q Consensus 319 d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l 360 (774)
..+.++|.|..++++ .++++|++.+++.+|++||..++...
T Consensus 79 ~~r~~~F~i~~~~~~-~~~f~A~s~~e~~~Wi~ai~~~~~~~ 119 (123)
T 1wjm_A 79 RKRKHVFKLGLQDGK-EYLFQAKDEAEMSSWLRVVNAAIASG 119 (123)
T ss_dssp SSCSSEEEEECSSSC-EEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEEEcCCc-EEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 457899999987765 78999999999999999999988744
No 461
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=92.53 E-value=0.14 Score=45.89 Aligned_cols=41 Identities=15% Similarity=0.205 Sum_probs=35.4
Q ss_pred CCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhh
Q psy4897 319 DSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVL 360 (774)
Q Consensus 319 d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l 360 (774)
..+.++|+|...++. ..+++|++.+++.+|++||..++...
T Consensus 63 ~~r~~~F~l~~~~~~-~y~f~A~s~ee~~~Wi~ai~~~~~~~ 103 (112)
T 3cxb_B 63 TDRPHAFQVILSDRP-CLELSAESEAEMAEWMQHLCQAVSKG 103 (112)
T ss_dssp SSCTTEEEEEETTSC-CEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred CCCCeEEEEEcCCCC-EEEEEcCCHHHHHHHHHHHHHHhhcc
Confidence 347889999977765 78999999999999999999988753
No 462
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=92.34 E-value=0.16 Score=46.32 Aligned_cols=41 Identities=20% Similarity=0.344 Sum_probs=35.1
Q ss_pred CCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhh
Q psy4897 319 DSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVL 360 (774)
Q Consensus 319 d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l 360 (774)
+.+.++|.|..+++ ++.+|+|++.+++.+|++||..+|...
T Consensus 86 ~~~~~~F~I~t~~~-r~~~l~A~s~~e~~~Wi~ai~~~i~~~ 126 (128)
T 2rlo_A 86 EEENFEFLIVSSTG-QTWHFEAASFEERDAWVQAIESQILAS 126 (128)
T ss_dssp CCCCCCEEEECTTS-CEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEcCCC-CEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 35778999998865 479999999999999999999988753
No 463
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=92.12 E-value=0.22 Score=44.75 Aligned_cols=55 Identities=15% Similarity=0.263 Sum_probs=41.2
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCc--------------------eeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGV--------------------HSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~--------------------~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
+.+++.-|.+.. .....+.++|+|..+++. +..+|+|++.+++.+|++||..+|.
T Consensus 46 g~i~L~~~~v~~--~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 46 GIIPLENLSIRE--VLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp EEEECTTCEEEE--ECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEECCceEEEE--ccCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 345555554332 123357889999988753 6889999999999999999998886
No 464
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.93 E-value=0.25 Score=43.59 Aligned_cols=41 Identities=24% Similarity=0.404 Sum_probs=34.4
Q ss_pred cCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhh
Q psy4897 318 YDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVL 360 (774)
Q Consensus 318 ~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l 360 (774)
.+.+.++|.|..+ .++.+|+|++.+++.+|++||..++...
T Consensus 65 ~~~~~~~F~i~~~--~r~~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 65 KDGKKCLFLVKCF--DKTFEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp CTTCCSEEEEECS--SCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEeC--CCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 3457789999876 4579999999999999999999988743
No 465
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=91.92 E-value=0.36 Score=44.63 Aligned_cols=78 Identities=15% Similarity=0.168 Sum_probs=49.9
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccC---C--CCCc--EEEEEEeCCCCceeeEEEEec
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSS---R--HSDV--IVFSVRCGTPQGVATHHLRAE 530 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s---~--~~~~--~~f~~~~~t~~g~~~~~~~~e 530 (774)
...||++|..|..+++-+|.+- .-.++...-||-+..-|... . ..+. |||.++|.+ .++| --|
T Consensus 21 d~~rKRHYWrLD~K~Itlf~~e-----~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~----~~yy-Vg~ 90 (125)
T 2coa_A 21 DTLRKRHYWRLDCKCITLFQNN-----TTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTAN----ATYF-VGE 90 (125)
T ss_dssp SCCCEEEEEEECSSEEEEESSS-----SCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSS----CCCC-EEC
T ss_pred CccccceeeEecCCeEEEEecC-----CCCceeeeeehhHeecccccccccccCCCCCCceEEEEeCC----eEEE-Ecc
Confidence 4578999999999999999983 35666666666554333321 1 1222 999999974 2343 334
Q ss_pred C----h--------hHHHHHHHHHHHH
Q psy4897 531 T----H--------RDLANWARTLVQA 545 (774)
Q Consensus 531 t----~--------~dl~~w~~~l~~~ 545 (774)
. . ..+..|+.+|.||
T Consensus 91 ~~~~~p~~~sg~g~~~a~~W~~aIrqA 117 (125)
T 2coa_A 91 MPGGTPGGPSGQGAEAARGWETAIRQA 117 (125)
T ss_dssp CSCCCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCcCccccHHHHHHHHHHHhh
Confidence 2 1 2256677776665
No 466
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=91.86 E-value=0.33 Score=42.28 Aligned_cols=37 Identities=22% Similarity=0.438 Sum_probs=32.5
Q ss_pred CCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 321 ENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 321 r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
+.++|.|..++++ .++|+|++.+++.+|++||..+++
T Consensus 73 ~~~~F~i~~~~~~-~~~l~a~s~~e~~~Wi~ai~~~~k 109 (109)
T 2i5f_A 73 EENLFEIITADEV-HYFLQAATPKERTEWIKAIQMASR 109 (109)
T ss_dssp CCSEEEEECTTCC-EEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CceEEEEEeCCCC-EEEEEcCCHHHHHHHHHHHHHHhC
Confidence 6789999988654 699999999999999999998763
No 467
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.80 E-value=0.61 Score=43.34 Aligned_cols=79 Identities=18% Similarity=0.196 Sum_probs=51.7
Q ss_pred CCceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccC---C--CCCc--EEEEEEeCCCCceeeEEEEec
Q psy4897 458 TDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSS---R--HSDV--IVFSVRCGTPQGVATHHLRAE 530 (774)
Q Consensus 458 ~~~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s---~--~~~~--~~f~~~~~t~~g~~~~~~~~e 530 (774)
...|+++|..|..+++-+|.+ +.-.++...-||-+..-|... . ..+. |||.++|.+ .-||--|
T Consensus 21 d~~rKRHYWrLD~K~Itlf~~-----e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~-----~~y~Vge 90 (129)
T 2d9z_A 21 DNLRKRHYWRLDSKCLTLFQN-----ESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDT-----MVYFVGE 90 (129)
T ss_dssp CCCCEEEEEEEESSCEEEESC-----SSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSS-----CEEEECB
T ss_pred CccccceeeEecCCeEEEEec-----CCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEECC-----EEEEEcc
Confidence 356899999999999999998 345666666666655433321 1 1222 999999873 3455555
Q ss_pred C----------------hhHHHHHHHHHHHHH
Q psy4897 531 T----------------HRDLANWARTLVQAT 546 (774)
Q Consensus 531 t----------------~~dl~~w~~~l~~~~ 546 (774)
. ......|+.+|.||.
T Consensus 91 ~~~~~~~~~~~~~sg~g~~~a~~We~aIrqAL 122 (129)
T 2d9z_A 91 NNGDSSHNPVLAATGVGLDVAQSWEKAIRQAL 122 (129)
T ss_dssp CCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccccccchHHHHHHHHHHHHhc
Confidence 2 244455777776664
No 468
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=91.77 E-value=0.2 Score=46.50 Aligned_cols=56 Identities=20% Similarity=0.378 Sum_probs=40.5
Q ss_pred cCcccceeeEeeecccccCCCCceEEEecCCC----------------------ceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 301 TRYLPLQLCYLVRNYKHYDSENRTLELHSPDG----------------------VHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 301 ~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg----------------------~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
.+.+++.-|.+... ....+.++|+|..++. .+..+++|++.+++.+|++||..++.
T Consensus 47 ~G~I~L~~~~v~~~--~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 47 VGTVLLNACEIIER--PSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp CEEEECSSCEECCC--CTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred eEEEEcCCCEEEEC--CCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 45667766665331 2233568999986543 23478999999999999999998886
No 469
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=91.55 E-value=0.4 Score=43.42 Aligned_cols=58 Identities=26% Similarity=0.305 Sum_probs=43.6
Q ss_pred CcCcccceeeEeeecccccCC-CCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhh
Q psy4897 300 DTRYLPLQLCYLVRNYKHYDS-ENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHV 359 (774)
Q Consensus 300 ~~~~ipl~~~~l~R~~~~~d~-r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~ 359 (774)
..+.|||.-|.+..-.+..+. +.++|.|.. ..++.+++|++.+++.+|++||..++..
T Consensus 49 p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~--~~~~y~f~A~s~e~~~~Wl~al~~A~~~ 107 (112)
T 2coc_A 49 LPRTIPLPSCKLSVPDPEERLDSGHVWKLQW--AKQSWYLSASSAELQQQWLETLSTAAHS 107 (112)
T ss_dssp SCSEECGGGCEEECCCSSSCCSSSEEEEEEE--TTEEEEEEESSHHHHHHHHHHHHHHHSC
T ss_pred cceEEEcCCCEEEecCcccccCCCCEEEEec--CCeEEEEEcCCHHHHHHHHHHHHHHhcC
Confidence 456788877777642222222 678999994 3468999999999999999999988764
No 470
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=91.27 E-value=0.21 Score=43.29 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=34.6
Q ss_pred CCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhh
Q psy4897 320 SENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVL 360 (774)
Q Consensus 320 ~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l 360 (774)
.++++|.|..+++ +..+++|++.+++.+|++||..+|..+
T Consensus 68 ~~~~~F~i~~~~~-r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 68 KKESCFELTSQDR-RTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp GGGGEEEEECSSS-CCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEEcCCC-cEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 3678999998764 478999999999999999999998765
No 471
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=91.25 E-value=0.27 Score=42.61 Aligned_cols=37 Identities=22% Similarity=0.505 Sum_probs=31.5
Q ss_pred CCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHH
Q psy4897 319 DSENRTLELHSPDGVHSCILRASDASEASLWFNTLHST 356 (774)
Q Consensus 319 d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~n 356 (774)
..+.++|.|...+++ +.+++|++.+++.+|++||..+
T Consensus 70 ~~~~~~F~i~~~~~~-~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 70 KKKKHVFKLRLSDGN-EYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp CSSSSEEEEECTTSC-EEEEECSSHHHHHHHHHHHHHC
T ss_pred cCCccEEEEEecCCC-EEEEECCCHHHHHHHHHHHhcC
Confidence 347789999976654 7999999999999999999864
No 472
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=91.20 E-value=0.24 Score=44.65 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=44.6
Q ss_pred CcccceeeEeeec--ccccCCCCceEEEecCC--CceeEEEeeCChHhHHHHHHHHHHHhhhhhHHH
Q psy4897 302 RYLPLQLCYLVRN--YKHYDSENRTLELHSPD--GVHSCILRASDASEASLWFNTLHSTLHVLTLKS 364 (774)
Q Consensus 302 ~~ipl~~~~l~R~--~~~~d~r~r~FeL~s~d--g~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~~~~ 364 (774)
+.+|+.-+.+... ......++++|.|..++ ..++.+++|++.+++.+|++||..++..+..+.
T Consensus 50 g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~ 116 (125)
T 1unq_A 50 REAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQE 116 (125)
T ss_dssp HTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEccceeEEeeeecccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcccch
Confidence 3455555443321 11234578899998653 346889999999999999999999998766653
No 473
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=90.81 E-value=0.3 Score=44.22 Aligned_cols=39 Identities=18% Similarity=0.332 Sum_probs=33.9
Q ss_pred CCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhh
Q psy4897 321 ENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVL 360 (774)
Q Consensus 321 r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l 360 (774)
+.++|+|..++. +.++|+|++.+++.+|++||..++..+
T Consensus 84 ~~~~F~i~~~~~-~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 84 EENLFEIITADE-VHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp SCSEEEEECTTC-CCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred CCeEEEEEcCCC-CEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 678999998764 368999999999999999999988744
No 474
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=90.39 E-value=0.26 Score=42.71 Aligned_cols=56 Identities=25% Similarity=0.433 Sum_probs=42.8
Q ss_pred cCcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhh
Q psy4897 301 TRYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLT 361 (774)
Q Consensus 301 ~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~ 361 (774)
.+.+++..|.+.. ...++++|.|..+ +.++.+|+|++.+++.+|++||..++..+.
T Consensus 41 ~g~i~L~~~~v~~----~~~~~~~F~i~~~-~~r~~~l~a~s~~e~~~Wi~al~~a~~~~~ 96 (103)
T 3rcp_A 41 KGSIKMAVCEIKV----HSADNTRMELIIP-GEQHFYMKAVNAAERQRWLVALGSSKASLT 96 (103)
T ss_dssp SCEEEGGGCEEEC----CTTCSSEEEEEET-TTEEEEEECSSHHHHHHHHHHHHTTSCCCC
T ss_pred ccEEEeeeeEEEE----cCCCCceEEEEeC-CCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 4566776666554 1335789999875 345899999999999999999999887543
No 475
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=90.39 E-value=0.39 Score=42.16 Aligned_cols=55 Identities=16% Similarity=0.239 Sum_probs=39.9
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
+.+++.-+.+.... ..+.++++|.|...+ .++.+++|++.+++.+|++||..++.
T Consensus 49 ~~i~L~~~~~~~~~-~~~~~~~~F~i~~~~-~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 49 ESQPLLGFTVTLVK-DENSESKVFQLLHKG-MVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp EEEECSSEEEEECC-CSSCSSSEEEEEETT-EEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred ceEECCCCEEEECC-CCCCCCcEEEEEeCC-CeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 45566555554421 223467899998643 45799999999999999999998865
No 476
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.18 E-value=0.45 Score=41.99 Aligned_cols=56 Identities=13% Similarity=0.189 Sum_probs=39.5
Q ss_pred CcccceeeEeeeccc-ccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 302 RYLPLQLCYLVRNYK-HYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~-~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
+.+++.-+.+..-.. ....++++|.|...+. +.++|+|++.+++.+|++||..++.
T Consensus 53 g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~-r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 53 GSIPLLSFRVAAVQPSDNISRKHTFKAEHAGV-RTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp EEEECSSCEEEECCTTTTCCCSSEEEEECSSS-CEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CEEEeCCeEEEEcCccccCCCccEEEEEcCCC-cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 445555554432211 2234778999975543 5799999999999999999998875
No 477
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=90.16 E-value=0.47 Score=42.65 Aligned_cols=56 Identities=9% Similarity=0.126 Sum_probs=39.3
Q ss_pred CcccceeeEeeecccc-cCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 302 RYLPLQLCYLVRNYKH-YDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~-~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
+.+++..|.+...... ...+.++|.|..++. +.++|+|++.+++.+|++||..++.
T Consensus 63 g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~-r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 63 GSILLPSFQIALLTSEDHINRKYAFKAAHPNM-RTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp EEECGGGSEEEECCGGGCCSSCSEEEEECSSS-CCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred eEEEcCceEEEEcCCcccCCCCeEEEEEcCCC-CEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 3455544544332111 224678999988764 4799999999999999999987764
No 478
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=89.97 E-value=0.26 Score=53.79 Aligned_cols=58 Identities=19% Similarity=0.367 Sum_probs=45.0
Q ss_pred cccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhhH
Q psy4897 303 YLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLTL 362 (774)
Q Consensus 303 ~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~~ 362 (774)
.+++..|.+.. .....+++||+|..+++.++.+++|++.+++.+|++||..++..+..
T Consensus 322 ~i~l~~~~v~~--~~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~~~ 379 (385)
T 2q13_A 322 AMDIDNCSVMA--VDCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQIYL 379 (385)
T ss_dssp EEECTTCEEEE--ECCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHTTCC-
T ss_pred eEEccceEEEe--ccccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHhhcc
Confidence 45555665432 22345778999999998788999999999999999999999886654
No 479
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=89.68 E-value=0.92 Score=42.32 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=54.1
Q ss_pred CCCCceEEEEEEeccc-----eeEEecCCCCChhcccCccccccee---eEeeeccCCCCCc-EEEEEEeCCCCceeeEE
Q psy4897 456 DSTDRWVSIFGAVTER-----ELRLYESAPWSPEAWSTPAHVFPLV---STRLVSSSRHSDV-IVFSVRCGTPQGVATHH 526 (774)
Q Consensus 456 ~~~~~w~~~~~~l~~~-----~l~~y~~~p~~~~~~~~~~~~~~l~---~~r~~~~s~~~~~-~~f~~~~~t~~g~~~~~ 526 (774)
+...+|++..++|+-. -++-|-+||-+ ++|-..-++. +.|....-+--|. ++|.|++..+ .-++
T Consensus 37 ~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPks----sKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~---~eyi 109 (136)
T 1v5m_A 37 GGTAQWQKCRLLLRRAVAGERFRLEFFVPPKA----SRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENG---AEYI 109 (136)
T ss_dssp CCSCCCEEEEEEEEECSSSCCEEEEEESSTTS----SSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTS---CBEE
T ss_pred CcccchhheeeEEEEccCCCceEEEEecCCcc----cCCccccchhhhhhhhhccccccCCccceEEEEecCC---cEEE
Confidence 4678998888887643 33334466643 4444444433 3442221122444 9999997643 4699
Q ss_pred EEecChhHHHHHHHHHHHHH
Q psy4897 527 LRAETHRDLANWARTLVQAT 546 (774)
Q Consensus 527 ~~~et~~dl~~w~~~l~~~~ 546 (774)
|-+.+..||..|...|..|+
T Consensus 110 ~ea~d~~q~~sWla~Ir~C~ 129 (136)
T 1v5m_A 110 LETIDSLQKHSWVADIQGCV 129 (136)
T ss_dssp EECSSHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHhhc
Confidence 99999999999999985544
No 480
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.67 E-value=0.24 Score=44.18 Aligned_cols=41 Identities=15% Similarity=0.301 Sum_probs=34.5
Q ss_pred CCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhhH
Q psy4897 320 SENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLTL 362 (774)
Q Consensus 320 ~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~~ 362 (774)
.+.++|+|..+ .++++|+|++.+++.+|++||..++.....
T Consensus 65 ~~~~~F~I~~~--~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 105 (114)
T 2da0_A 65 EDKKSFDLISH--NRTYHFQAEDEQDYVAWISVLTNSKEEALT 105 (114)
T ss_dssp SSSSCEEEEET--TEEEEEECSSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcC--CcEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Confidence 35679999964 578999999999999999999988875544
No 481
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.66 E-value=0.43 Score=42.80 Aligned_cols=56 Identities=25% Similarity=0.337 Sum_probs=41.3
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhhH
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLTL 362 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~~ 362 (774)
+.|++.-|.+.. .+.++++|.|..+++ ++++|+|++.+++.+|++||..++.....
T Consensus 53 g~I~L~~~~v~~----~~~~~~~F~i~~~~~-r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (120)
T 2d9x_A 53 GTLQLAGAVISP----SDEDSHTFTVNAASG-EQYKLRATDAKERQHWVSRLQICTQHHTE 108 (120)
T ss_dssp EEEECTTCCEEC----CSSSSSCEEECCSSS-CCEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEcceEEEEe----cCCCCCEEEEEcCCC-CEEEEECCCHHHHHHHHHHHHHHHHHhhh
Confidence 344554443322 244678999998764 57999999999999999999998875443
No 482
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=89.34 E-value=0.6 Score=41.62 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=40.7
Q ss_pred CcccceeeEeeecccc-cCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhh
Q psy4897 302 RYLPLQLCYLVRNYKH-YDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHV 359 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~-~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~ 359 (774)
+.+++.-+.+...... ...+.++|.|..+++ ++++|+|++.+++.+|++||..++..
T Consensus 53 g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~-r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 53 GSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGM-RTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp EEEEGGGCEEEECCSSCTTSSSSEEEEECTTS-CCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred eEEECCCCEEEECCCCccCCCcEEEEEECCCC-eEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 4455555554442221 233678999987654 47899999999999999999998874
No 483
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=89.31 E-value=0.53 Score=43.10 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=33.3
Q ss_pred CCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 320 SENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 320 ~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
.+.++|.|...+++ +++|+|++.+++.+|++||..++.
T Consensus 77 ~~~~~F~I~~~~~r-~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 77 SRDGLLTVNLREGS-RLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp CTTTEEEEEETTSC-EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CcCcEEEEEeCCCC-EEEEEcCCHHHHHHHHHHHHHHHc
Confidence 36789999987765 799999999999999999998875
No 484
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=89.21 E-value=0.7 Score=44.17 Aligned_cols=58 Identities=12% Similarity=0.167 Sum_probs=47.5
Q ss_pred cCcccceeeEeeecccccCCCCceEEEecCCC-ceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 301 TRYLPLQLCYLVRNYKHYDSENRTLELHSPDG-VHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 301 ~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg-~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
.+.+.+.-|.+.........+.+.|.|.++.. .+++++.+++.+++.+|++||..++-
T Consensus 90 kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 90 RGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp CEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 57778888888773333345889999999876 78999999999999999999998764
No 485
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=89.12 E-value=1.1 Score=42.88 Aligned_cols=77 Identities=14% Similarity=-0.017 Sum_probs=54.9
Q ss_pred ceEEEEEEeccceeEEecCCCCChhcccCcccccceeeEeeeccCCCCCcEEEEEEeCCCCceeeEEEEecChhHHHHHH
Q psy4897 460 RWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLANWA 539 (774)
Q Consensus 460 ~w~~~~~~l~~~~l~~y~~~p~~~~~~~~~~~~~~l~~~r~~~~s~~~~~~~f~~~~~t~~g~~~~~~~~et~~dl~~w~ 539 (774)
.|+.++++||+.-.++|-+|--..--+..|.... +++...+ ..+|.|.|+. ++++|... ..+-..|.
T Consensus 65 ~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~~----l~ve~k~----~~~F~I~Tp~----RtY~~~d~-~~~AqeWv 131 (151)
T 1w1g_A 65 FARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQE----LRPEAKN----FKTFFVHTPN----RTYYLMDP-SGNAHKWC 131 (151)
T ss_dssp EEEEEEEEEETTTEEEEEETTTTEEEEEECCCTT----CEEEESS----SSEEEEEETT----EEEEEECT-TSCHHHHH
T ss_pred cceeEEEEEcCCceEEEEcCccccccceEecCCC----eeEEEcC----CCEEEEECCC----ceEEEEcC-ccCHHHHH
Confidence 3999999999999999999875544444444421 2322111 2489999883 79999886 67778899
Q ss_pred HHHHHHHHHH
Q psy4897 540 RTLVQATHSC 549 (774)
Q Consensus 540 ~~l~~~~~~~ 549 (774)
++|..+.+..
T Consensus 132 ~aI~~~~~~~ 141 (151)
T 1w1g_A 132 RKIQEVWRQR 141 (151)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888887643
No 486
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.12 E-value=0.45 Score=42.72 Aligned_cols=53 Identities=17% Similarity=0.276 Sum_probs=39.5
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhh
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHV 359 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~ 359 (774)
+.|++.-+.+... .+.+.++|.|..+ .++.+|+|++.+++.+|++||..++..
T Consensus 53 g~I~L~~~~~~~~---~~~~~~~F~i~~~--~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (119)
T 2dhk_A 53 DSIDLSSAVFDCK---ADAEEGIFEIKTP--SRVITLKAATKQAMLYWLQQLQMKRWE 105 (119)
T ss_dssp EEEEGGGCEEEEC---TTGGGCEEEEECS--SCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cEEECCCCEEEec---CCCCCCEEEEEeC--CcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 4455554444431 2346789999876 668999999999999999999988743
No 487
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=89.11 E-value=0.62 Score=42.29 Aligned_cols=42 Identities=29% Similarity=0.464 Sum_probs=34.0
Q ss_pred CCCceEEEec--CCC----------------ceeEEEeeCChHhHHHHHHHHHHHhhhhh
Q psy4897 320 SENRTLELHS--PDG----------------VHSCILRASDASEASLWFNTLHSTLHVLT 361 (774)
Q Consensus 320 ~r~r~FeL~s--~dg----------------~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~ 361 (774)
.++++|+|.. +.. .++++|+|++.+++.+|++||..+|..+.
T Consensus 72 ~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~~~ 131 (134)
T 2y7b_A 72 ARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVDIR 131 (134)
T ss_dssp CCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHh
Confidence 4788999975 221 14799999999999999999999988653
No 488
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=89.08 E-value=4.7 Score=41.83 Aligned_cols=58 Identities=16% Similarity=0.330 Sum_probs=39.8
Q ss_pred cCcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhh
Q psy4897 301 TRYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLT 361 (774)
Q Consensus 301 ~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~ 361 (774)
.+.|++.-|...... ....+.++|.|..+ .++++|.|++.+++.+|++||...+....
T Consensus 58 ~g~I~L~~~~~V~~~-~~~~~~~~F~I~t~--~rty~l~A~se~e~~~Wi~aL~~~~~~~k 115 (264)
T 1qqg_A 58 KRSIPLESCFNINKR-ADSKNKHLVALYTR--DEHFAIAADSEAEQDSWYQALLQLHNRAK 115 (264)
T ss_dssp SEEEEGGGEEEEEEE-CCSSCSSEEEEEES--SCEEEEECSSHHHHHHHHHHHHHHC----
T ss_pred ceEEEeeceEEEEec-cCCCCCcEEEEEEC--CEEEEEEeCCHHHHHHHHHHHHHHHHhcc
Confidence 345666655422111 12447789999976 56899999999999999999999887554
No 489
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=88.45 E-value=0.46 Score=41.72 Aligned_cols=39 Identities=15% Similarity=0.174 Sum_probs=33.6
Q ss_pred CCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhh
Q psy4897 320 SENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHV 359 (774)
Q Consensus 320 ~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~ 359 (774)
.++++|.|..++ .++.+|+|++.+++.+|++||..++..
T Consensus 64 ~~~~~F~i~~~~-~r~~~l~A~s~~e~~~Wi~al~~~~~~ 102 (107)
T 2cof_A 64 DHLYSFRILHKG-EELAKLEAKSSEEMGHWLGLLLSESGS 102 (107)
T ss_dssp TBSCEEEEEETT-EEEEEEECSSHHHHHHHHHHHHHHSSC
T ss_pred CCCeEEEEEeCC-CeEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 467899998854 668999999999999999999987763
No 490
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=88.40 E-value=0.65 Score=48.28 Aligned_cols=58 Identities=14% Similarity=0.173 Sum_probs=43.2
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhh
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLT 361 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~ 361 (774)
+.|++.-|.+.. ......+.++|.|...+++ +++++|++.+++.+|++||..++..+.
T Consensus 70 g~I~L~~~~v~~-~~~~~kk~~~F~I~t~~~r-~y~f~A~s~ee~~~Wi~aI~~a~~~~~ 127 (263)
T 3a8p_A 70 CALFAEDSIVQS-VPEHPKKEHVFCLSNSCGD-VYLFQATSQTDLENWVTAIHSACASLF 127 (263)
T ss_dssp EEEECTTCEEEE-CTTCSSCSSEEEEECTTSC-EEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEcCCcEEEE-CCcCCCCCCEEEEEcCCCc-EEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 445665555443 2222347899999987655 789999999999999999999998653
No 491
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.28 E-value=0.63 Score=41.43 Aligned_cols=38 Identities=13% Similarity=0.302 Sum_probs=32.0
Q ss_pred CCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 320 SENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 320 ~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
.++++|.|...+. +.++|+|++.+++.+|++||..++.
T Consensus 83 ~~~~~F~i~~~~~-r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 83 SRKHTFKAEHAGV-RTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp SSSSEEEEECSSS-CEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CcccEEEEecCCC-cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 4678999975543 5799999999999999999998874
No 492
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=88.12 E-value=0.49 Score=41.64 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=31.4
Q ss_pred CCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 321 ENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 321 r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
++++|.|..++ .++.+|+|++.+++.+|++||..+..
T Consensus 75 ~~~~F~i~~~~-~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 75 KDCMLQIVCRD-GKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp GGGEEEEEETT-SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cCcEEEEEecC-CcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 36799998655 45899999999999999999998764
No 493
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=87.67 E-value=0.73 Score=41.37 Aligned_cols=57 Identities=25% Similarity=0.293 Sum_probs=41.2
Q ss_pred CcccceeeEeeecccccCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhh
Q psy4897 302 RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLT 361 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~ 361 (774)
+.+++.-|..... .....++++|.|..+ .++++|+|++.+++.+|++||..+|..+.
T Consensus 59 g~i~L~~~~~v~~-~~~~~~~~~F~i~~~--~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 115 (126)
T 1fao_A 59 RILDLTECSAVQF-DYSQERVNCFCLVFP--FRTFYLCAKTGVEADEWIKILRWKLSQIR 115 (126)
T ss_dssp EEEEGGGCCEEEE-ECSSSSSSEEEEEET--TEEEEEECSSHHHHHHHHHHHHHHHHTC-
T ss_pred eEEEccceEEEEe-cccCCCCCEEEEEeC--CcEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 3455554443321 122346789999874 56899999999999999999999998744
No 494
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=87.59 E-value=0.52 Score=43.93 Aligned_cols=41 Identities=22% Similarity=0.363 Sum_probs=33.3
Q ss_pred CCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhhH
Q psy4897 321 ENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLTL 362 (774)
Q Consensus 321 r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~~ 362 (774)
+.++|.|..+++ ++++|+|++.+++..|++||..++..+..
T Consensus 83 ~~~~F~I~~~~~-r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 123 (148)
T 1u5f_A 83 KDCCFEICAPDK-RIYQFTAASPKDAEEWVQQLKFILQDLGS 123 (148)
T ss_dssp GGGEEEEECTTS-CEEEEECSSHHHHHHHHHHHHHHCC----
T ss_pred CccEEEEECCCC-cEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 568999998764 48999999999999999999999987654
No 495
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=87.58 E-value=0.64 Score=44.27 Aligned_cols=40 Identities=18% Similarity=0.492 Sum_probs=34.9
Q ss_pred CCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhhhh
Q psy4897 320 SENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLT 361 (774)
Q Consensus 320 ~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~l~ 361 (774)
.+.++|.|..++ +.++|+|++.+++.+|++||..++....
T Consensus 75 ~~~~~F~I~t~~--r~~~l~A~s~~e~~~Wi~ai~~~~~~~~ 114 (168)
T 2j59_M 75 KRKNVFRLTTSD--CECLFQAEDRDDMLAWIKTIQESSNLNE 114 (168)
T ss_dssp SCSSEEEEECSS--CEEEEECSSHHHHHHHHHHHHHHCCCCH
T ss_pred CCCCEEEEEeCC--ceEEEEcCCHHHHHHHHHHHHHHHhcCc
Confidence 477899999877 5799999999999999999999987433
No 496
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=87.45 E-value=0.79 Score=42.47 Aligned_cols=56 Identities=14% Similarity=0.148 Sum_probs=40.8
Q ss_pred cCcccceeeEeeecccccCCCCceEEEecCCCc------eeEEEeeCChHhHHHHHHHHHHH
Q psy4897 301 TRYLPLQLCYLVRNYKHYDSENRTLELHSPDGV------HSCILRASDASEASLWFNTLHST 356 (774)
Q Consensus 301 ~~~ipl~~~~l~R~~~~~d~r~r~FeL~s~dg~------~~~~Lr~~d~~~~~~W~~Ai~~n 356 (774)
.+.+||.-..+.--..+...+.++|+|.++|++ .+..|.|.+.+++.+|+.||..+
T Consensus 54 ~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 54 KYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp EEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred ceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 445666544443222233467889999999865 58999999999999999999443
No 497
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=87.17 E-value=0.87 Score=41.64 Aligned_cols=57 Identities=19% Similarity=0.362 Sum_probs=42.6
Q ss_pred cCcccceeeEeeecccccCC--------CCceEEEecCCC-----ceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 301 TRYLPLQLCYLVRNYKHYDS--------ENRTLELHSPDG-----VHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 301 ~~~ipl~~~~l~R~~~~~d~--------r~r~FeL~s~dg-----~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
.+.++|.-|.+.--. ..+. +++.|.|...+. .+..+++|++.+++.+|++||...++
T Consensus 49 ~gsI~L~~c~v~~~~-~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 49 VMSLALSECTVTEHS-RKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp SEEEEGGGEEEEEEC-CCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred eEEEECCCCEEEEcc-cccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 467777777766522 2222 778999998774 46999999999999999999997653
No 498
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=87.05 E-value=0.53 Score=42.43 Aligned_cols=38 Identities=13% Similarity=0.297 Sum_probs=33.3
Q ss_pred CCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhhh
Q psy4897 321 ENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHV 359 (774)
Q Consensus 321 r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~~ 359 (774)
+.++|.|..++++ .++|+|++.+++.+|++||..++..
T Consensus 88 ~~~~F~I~~~~~r-~~~l~a~s~~e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 88 QGNLFKVITKDDT-HYYIQASSKAERAEWIEAIKKLTSG 125 (129)
T ss_dssp CSSCEEECCTTCC-CEEECCSSHHHHHHHHHHHHHHSSS
T ss_pred CCceEEEEcCCCC-EEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 5789999987654 7999999999999999999998864
No 499
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=86.58 E-value=1 Score=42.89 Aligned_cols=37 Identities=11% Similarity=0.241 Sum_probs=31.9
Q ss_pred CCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 320 SENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 320 ~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
.++++|.|..++ ++++++|++.+++.+|++||...+.
T Consensus 77 ~~~~~F~I~t~~--r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 77 KNCAKFTLVLPK--EEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp SCCCEEEEECSS--CCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CcCcEEEEEcCC--CEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 356899999865 4689999999999999999998876
No 500
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=86.52 E-value=1.3 Score=41.10 Aligned_cols=55 Identities=13% Similarity=0.196 Sum_probs=38.4
Q ss_pred CcccceeeEeeecccc--cCCCCceEEEecCCCceeEEEeeCChHhHHHHHHHHHHHhh
Q psy4897 302 RYLPLQLCYLVRNYKH--YDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLH 358 (774)
Q Consensus 302 ~~ipl~~~~l~R~~~~--~d~r~r~FeL~s~dg~~~~~Lr~~d~~~~~~W~~Ai~~ni~ 358 (774)
+.|+|.-+.+.--.+. ...+.++|++..+ +. +++|.|++.+++.+|++||+.++.
T Consensus 54 G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~-~~-ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 54 ELLQLDGYTVDYTDPQPGLEGGRAFFNAVKE-GD-TVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp EEEECSSCEEEECCCCSSCCSCSSEEEEECS-SC-EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred eEEECCCcEEEEecCCcccccCceEEEEecC-Cc-eEEEEcCCHHHHHHHHHHHHHHhc
Confidence 4455554443221122 2347789998865 33 599999999999999999998885
Done!