Your job contains 1 sequence.
>psy4920
MCMVMEISALHALHLTLDHATPLRNEYSESIGCQIIKQDDVTQEGLSGLKSCPPDGLVWR
LAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGVKKKSLEALV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4920
(111 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-061027-53 - symbol:rab3gap1 "RAB3 GTPase ac... 152 1.3e-09 1
UNIPROTKB|E1BT09 - symbol:RAB3GAP1 "Uncharacterized prote... 152 1.4e-09 1
RGD|1306487 - symbol:RGD1306487 "similar to RAB3 GTPase-a... 146 4.3e-09 1
MGI|MGI:2445001 - symbol:Rab3gap1 "RAB3 GTPase activating... 147 4.6e-09 1
UNIPROTKB|F1S0D4 - symbol:RAB3GAP1 "Uncharacterized prote... 146 5.0e-09 1
UNIPROTKB|J9NVN6 - symbol:RAB3GAP1 "Uncharacterized prote... 146 5.1e-09 1
UNIPROTKB|A6H8Z3 - symbol:RAB3GAP1 "Rab3 GTPase-activatin... 146 5.5e-09 1
UNIPROTKB|E2RK37 - symbol:RAB3GAP1 "Uncharacterized prote... 146 5.8e-09 1
UNIPROTKB|Q15042 - symbol:RAB3GAP1 "Rab3 GTPase-activatin... 146 5.9e-09 1
UNIPROTKB|A4FUE5 - symbol:RAB3GAP1 "RAB3GAP1 protein" spe... 146 5.9e-09 1
UNIPROTKB|C9J837 - symbol:RAB3GAP1 "Rab3 GTPase-activatin... 146 5.9e-09 1
FB|FBgn0051935 - symbol:CG31935 species:7227 "Drosophila ... 114 1.4e-05 1
>ZFIN|ZDB-GENE-061027-53 [details] [associations]
symbol:rab3gap1 "RAB3 GTPase activating protein
subunit 1" species:7955 "Danio rerio" [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0005096 "GTPase activator
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR026147 Pfam:PF13890 ZFIN:ZDB-GENE-061027-53
GO:GO:0005737 GO:GO:0005097 GO:GO:0032851 PANTHER:PTHR21422
EMBL:BC068420 IPI:IPI00503950 RefSeq:NP_001071256.2
UniGene:Dr.11461 GeneID:777744 KEGG:dre:777744 CTD:22930
HOGENOM:HOG000253924 HOVERGEN:HBG079116 InParanoid:Q6NUV0
NextBio:20924304 Uniprot:Q6NUV0
Length = 969
Score = 152 (58.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 49 LKSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
LKSCP D L RLA+C + GG ++ AH+W EFV E+RYRWEN+ I G+
Sbjct: 449 LKSCPSDSLTHRLALCICMVNFHHGGVRAVAHLWQEFVLEMRYRWENNCLIYGL 502
>UNIPROTKB|E1BT09 [details] [associations]
symbol:RAB3GAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 GO:GO:0032851
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 OMA:LDPIQAP
EMBL:AADN02016954 EMBL:AADN02016953 IPI:IPI00599707
Ensembl:ENSGALT00000019948 Uniprot:E1BT09
Length = 988
Score = 152 (58.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 47 SGLKSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
S KS P D L ++LA+C + GG K AH+W EFV E+RYRWEN+ IPG+
Sbjct: 450 SQFKSAPSDSLTYKLALCLCMINFYHGGVKGVAHLWQEFVLEMRYRWENNYLIPGL 505
>RGD|1306487 [details] [associations]
symbol:RGD1306487 "similar to RAB3 GTPase-activating protein"
species:10116 "Rattus norvegicus" [GO:0005097 "Rab GTPase activator
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0032851 "positive regulation of Rab GTPase activity"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IDA;IPI] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR026147 Pfam:PF13890 RGD:1306487 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0046982 GO:GO:0060076
GO:GO:0005097 eggNOG:NOG307494 PANTHER:PTHR21422
HOGENOM:HOG000253924 HOVERGEN:HBG079116 OrthoDB:EOG495ZR7
EMBL:AABR03085327 EMBL:AABR03086784 IPI:IPI00371942
UniGene:Rn.92067 IntAct:P69735 STRING:P69735 PhosphoSite:P69735
PRIDE:P69735 InParanoid:P69735 ArrayExpress:P69735
Genevestigator:P69735 GermOnline:ENSRNOG00000003953 Uniprot:P69735
Length = 775
Score = 146 (56.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 50 KSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
KS P D L ++LA+C + GG K AH+W EFV E+R+RWEN+ IPG+
Sbjct: 242 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL 294
>MGI|MGI:2445001 [details] [associations]
symbol:Rab3gap1 "RAB3 GTPase activating protein subunit 1"
species:10090 "Mus musculus" [GO:0005096 "GTPase activator
activity" evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007420
"brain development" evidence=ISO] [GO:0017137 "Rab GTPase binding"
evidence=ISO] [GO:0021854 "hypothalamus development" evidence=ISO]
[GO:0032851 "positive regulation of Rab GTPase activity"
evidence=ISO] [GO:0043010 "camera-type eye development"
evidence=ISO] [GO:0043087 "regulation of GTPase activity"
evidence=ISO] [GO:0060325 "face morphogenesis" evidence=ISO]
InterPro:IPR026147 Pfam:PF13890 MGI:MGI:2445001 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0005097 eggNOG:NOG307494
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 CTD:22930
HOVERGEN:HBG079116 OrthoDB:EOG495ZR7 ChiTaRS:RAB3GAP1 EMBL:AK172881
EMBL:AK076244 EMBL:AK076399 EMBL:AK080432 EMBL:AK164523
EMBL:BC028996 EMBL:BC046297 IPI:IPI00749720 RefSeq:NP_848805.2
UniGene:Mm.489713 ProteinModelPortal:Q80UJ7 STRING:Q80UJ7
PhosphoSite:Q80UJ7 PaxDb:Q80UJ7 PRIDE:Q80UJ7
Ensembl:ENSMUST00000037649 GeneID:226407 KEGG:mmu:226407
InParanoid:Q3TPB6 OMA:LDPIQAP NextBio:378122 Bgee:Q80UJ7
CleanEx:MM_RAB3GAP1 Genevestigator:Q80UJ7
GermOnline:ENSMUSG00000036104 Uniprot:Q80UJ7
Length = 981
Score = 147 (56.8 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 50 KSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGVKKKS 106
KS P D L ++LA+C + GG K AH+W EFV E+R+RWEN+ IPG+ S
Sbjct: 448 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGLASGS 504
>UNIPROTKB|F1S0D4 [details] [associations]
symbol:RAB3GAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 GO:GO:0032851
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 OMA:LDPIQAP
EMBL:CU466471 EMBL:CU469253 Ensembl:ENSSSCT00000017095
Uniprot:F1S0D4
Length = 868
Score = 146 (56.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 50 KSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
KS P D L ++LA+C + GG K AH+W EFV E+R+RWEN+ IPG+
Sbjct: 333 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL 385
>UNIPROTKB|J9NVN6 [details] [associations]
symbol:RAB3GAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005097 "Rab GTPase activator
activity" evidence=IEA] InterPro:IPR026147 Pfam:PF13890
GO:GO:0005097 GO:GO:0032851 GeneTree:ENSGT00390000006705
PANTHER:PTHR21422 EMBL:AAEX03011910 EMBL:AAEX03011909
Ensembl:ENSCAFT00000043032 Uniprot:J9NVN6
Length = 878
Score = 146 (56.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 50 KSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
KS P D L ++LA+C + GG K AH+W EFV E+R+RWEN+ IPG+
Sbjct: 349 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL 401
>UNIPROTKB|A6H8Z3 [details] [associations]
symbol:RAB3GAP1 "Rab3 GTPase-activating protein catalytic
subunit" species:9606 "Homo sapiens" [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 GO:GO:0032851 PANTHER:PTHR21422
HOVERGEN:HBG079116 IPI:IPI00555624 UniGene:Hs.306327
HGNC:HGNC:17063 ChiTaRS:RAB3GAP1 EMBL:AC017031 EMBL:AC020602
EMBL:BC146809 STRING:A6H8Z3 Ensembl:ENST00000539493 Uniprot:A6H8Z3
Length = 935
Score = 146 (56.5 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 50 KSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
KS P D L ++LA+C + GG K AH+W EFV E+R+RWEN+ IPG+
Sbjct: 405 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL 457
>UNIPROTKB|E2RK37 [details] [associations]
symbol:RAB3GAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005097 "Rab GTPase activator
activity" evidence=IEA] InterPro:IPR026147 Pfam:PF13890
GO:GO:0005097 GO:GO:0032851 GeneTree:ENSGT00390000006705
PANTHER:PTHR21422 OMA:LDPIQAP EMBL:AAEX03011910 EMBL:AAEX03011909
Ensembl:ENSCAFT00000008124 Uniprot:E2RK37
Length = 979
Score = 146 (56.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 50 KSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
KS P D L ++LA+C + GG K AH+W EFV E+R+RWEN+ IPG+
Sbjct: 443 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL 495
>UNIPROTKB|Q15042 [details] [associations]
symbol:RAB3GAP1 "Rab3 GTPase-activating protein catalytic
subunit" species:9606 "Homo sapiens" [GO:0005097 "Rab GTPase
activator activity" evidence=IDA] [GO:0017137 "Rab GTPase binding"
evidence=IPI] [GO:0043087 "regulation of GTPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0060325
"face morphogenesis" evidence=IMP] [GO:0021854 "hypothalamus
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IDA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0043010 GO:GO:0060325 GO:GO:0021854
GO:GO:0005097 Orphanet:2510 eggNOG:NOG307494 PANTHER:PTHR21422
CTD:22930 HOGENOM:HOG000253924 HOVERGEN:HBG079116 EMBL:D31886
EMBL:AL096752 EMBL:BC022977 IPI:IPI00014235 IPI:IPI00555624
RefSeq:NP_036365.1 UniGene:Hs.306327 ProteinModelPortal:Q15042
IntAct:Q15042 STRING:Q15042 PhosphoSite:Q15042 DMDM:62511099
PaxDb:Q15042 PRIDE:Q15042 Ensembl:ENST00000264158 GeneID:22930
KEGG:hsa:22930 UCSC:uc002tuj.3 GeneCards:GC02P135809
HGNC:HGNC:17063 HPA:HPA034495 MIM:600118 MIM:602536
neXtProt:NX_Q15042 PharmGKB:PA134969639 InParanoid:Q15042
OrthoDB:EOG495ZR7 PhylomeDB:Q15042 ChiTaRS:RAB3GAP1
GenomeRNAi:22930 NextBio:43655 ArrayExpress:Q15042 Bgee:Q15042
CleanEx:HS_RAB3GAP1 Genevestigator:Q15042
GermOnline:ENSG00000115839 Uniprot:Q15042
Length = 981
Score = 146 (56.5 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 50 KSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
KS P D L ++LA+C + GG K AH+W EFV E+R+RWEN+ IPG+
Sbjct: 449 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL 501
>UNIPROTKB|A4FUE5 [details] [associations]
symbol:RAB3GAP1 "RAB3GAP1 protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 GO:GO:0032851 eggNOG:NOG307494
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 CTD:22930
HOGENOM:HOG000253924 HOVERGEN:HBG079116 OrthoDB:EOG495ZR7
OMA:LDPIQAP EMBL:DAAA02005002 EMBL:DAAA02005003 EMBL:BC114755
IPI:IPI00692668 RefSeq:NP_001076952.1 UniGene:Bt.6988
Ensembl:ENSBTAT00000017891 GeneID:535393 KEGG:bta:535393
InParanoid:A4FUE5 NextBio:20876729 Uniprot:A4FUE5
Length = 982
Score = 146 (56.5 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 50 KSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
KS P D L ++LA+C + GG K AH+W EFV E+R+RWEN+ IPG+
Sbjct: 449 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL 501
>UNIPROTKB|C9J837 [details] [associations]
symbol:RAB3GAP1 "Rab3 GTPase-activating protein catalytic
subunit" species:9606 "Homo sapiens" [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR026147 Pfam:PF13890 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0005097 PANTHER:PTHR21422 CTD:22930
HOGENOM:HOG000253924 UniGene:Hs.306327 GeneID:22930 KEGG:hsa:22930
HGNC:HGNC:17063 PharmGKB:PA134969639 ChiTaRS:RAB3GAP1
GenomeRNAi:22930 NextBio:43655 OMA:LDPIQAP EMBL:AC017031
EMBL:AC020602 IPI:IPI00927682 RefSeq:NP_001165906.1
ProteinModelPortal:C9J837 STRING:C9J837 PRIDE:C9J837
Ensembl:ENST00000442034 UCSC:uc010fnf.3 ArrayExpress:C9J837
Bgee:C9J837 Uniprot:C9J837
Length = 988
Score = 146 (56.5 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 50 KSCPPDGLVWRLAICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
KS P D L ++LA+C + GG K AH+W EFV E+R+RWEN+ IPG+
Sbjct: 449 KSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWENNFLIPGL 501
>FB|FBgn0051935 [details] [associations]
symbol:CG31935 species:7227 "Drosophila melanogaster"
[GO:0005097 "Rab GTPase activator activity" evidence=ISS]
[GO:0032851 "positive regulation of Rab GTPase activity"
evidence=ISS] InterPro:IPR026147 Pfam:PF13890 GO:GO:0005737
EMBL:AE014134 GO:GO:0017137 GO:GO:0005097 eggNOG:NOG307494
GeneTree:ENSGT00390000006705 PANTHER:PTHR21422 RefSeq:NP_608608.2
UniGene:Dm.33640 PaxDb:Q9VQ26 EnsemblMetazoa:FBtr0077916
GeneID:33338 KEGG:dme:Dmel_CG31935 UCSC:CG31935-RA
FlyBase:FBgn0051935 InParanoid:Q9VQ26 OMA:DNCCTIV OrthoDB:EOG4Q2BX5
PhylomeDB:Q9VQ26 GenomeRNAi:33338 NextBio:783098 Bgee:Q9VQ26
GermOnline:CG31935 Uniprot:Q9VQ26
Length = 916
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 49 LKSCPPDGLVWRLA--ICSSHALYSMGGAKSFAHVWFEFVQELRYRWENSLRIPGV 102
+KS PD LV RL+ + + HA +G + A VW F ++LR W+NSL +PG+
Sbjct: 445 IKSAVPDSLVCRLSCLLATCHA--HLGSVEGMAQVWAAFTRQLRLLWDNSLMVPGI 498
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 111 96 0.00091 102 3 11 22 0.36 30
29 0.43 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 566 (60 KB)
Total size of DFA: 130 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 9.06u 0.09s 9.15t Elapsed: 00:00:32
Total cpu time: 9.06u 0.09s 9.15t Elapsed: 00:00:33
Start: Thu Aug 15 11:12:08 2013 End: Thu Aug 15 11:12:41 2013