Query psy4929
Match_columns 633
No_of_seqs 563 out of 2358
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 21:27:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4929.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4929hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 5.8E-39 2E-43 332.0 14.5 151 332-539 115-271 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 1.8E-39 6.3E-44 331.5 0.7 232 3-533 17-254 (256)
3 3no8_A BTB/POZ domain-containi 99.9 1.2E-25 4.1E-30 213.7 4.3 108 79-186 9-116 (176)
4 3htm_A Speckle-type POZ protei 99.9 1.8E-22 6E-27 192.8 9.4 79 3-85 20-99 (172)
5 3hqi_A Speckle-type POZ protei 99.8 1.1E-20 3.7E-25 197.9 9.3 79 3-85 160-239 (312)
6 3gbw_A E3 ubiquitin-protein li 99.8 7.4E-21 2.5E-25 179.3 4.9 98 86-187 7-114 (164)
7 2eqx_A Kelch repeat and BTB do 99.8 1.5E-19 5.1E-24 160.1 6.3 94 401-506 5-99 (105)
8 3hwj_A E3 ubiquitin-protein li 99.8 1.9E-19 6.6E-24 170.7 3.3 99 87-186 3-115 (172)
9 4eoz_A Speckle-type POZ protei 99.7 2.4E-19 8.1E-24 166.3 2.1 79 3-85 11-90 (145)
10 2if5_A Zinc finger and BTB dom 99.7 3.2E-18 1.1E-22 154.2 3.8 102 3-108 11-117 (120)
11 1r29_A B-cell lymphoma 6 prote 99.7 5.2E-18 1.8E-22 154.4 4.5 102 3-108 15-121 (127)
12 3b84_A Zinc finger and BTB dom 99.7 3.3E-18 1.1E-22 154.3 2.1 99 3-108 10-112 (119)
13 3ohu_A Transcription regulator 99.7 7E-18 2.4E-22 153.2 4.0 100 3-107 18-122 (125)
14 2vkp_A BTB/POZ domain-containi 99.7 5.8E-18 2E-22 149.6 1.9 100 11-110 2-105 (109)
15 2ppi_A Gigaxonin; BTB domain, 99.7 9E-18 3.1E-22 156.8 3.2 101 3-107 33-140 (144)
16 2yy9_A Zinc finger and BTB dom 99.7 7.8E-18 2.7E-22 155.4 2.0 104 3-113 11-118 (135)
17 2vpk_A Myoneurin; transcriptio 99.7 1.4E-17 4.7E-22 149.2 3.4 99 3-108 8-112 (116)
18 1buo_A POZ domain, protein (pr 99.7 1.1E-17 3.9E-22 151.1 2.9 101 3-111 14-118 (121)
19 2ihc_A Transcription regulator 99.7 1.4E-17 4.6E-22 151.3 3.3 101 3-108 15-120 (124)
20 2z8h_A Transcription regulator 99.7 1.7E-17 5.9E-22 153.4 3.9 106 3-113 22-132 (138)
21 3ga1_A Nucleus accumbens-assoc 99.6 3.3E-17 1.1E-21 149.7 3.5 99 3-108 19-122 (129)
22 3fkc_A Transcriptional regulat 99.6 4.8E-17 1.6E-21 146.2 3.0 93 3-103 17-114 (116)
23 2q81_A MIZ-1 protein; BTB/POZ 99.6 2.3E-17 7.8E-22 148.8 0.3 98 3-108 13-114 (119)
24 3m5b_A Zinc finger and BTB dom 99.5 1.4E-15 4.9E-20 137.4 2.8 93 4-110 19-115 (119)
25 3no8_A BTB/POZ domain-containi 99.2 7.8E-12 2.7E-16 118.9 3.1 50 574-623 3-52 (176)
26 3izc_Z 60S ribosomal protein R 99.1 4.5E-12 1.5E-16 117.1 -0.7 106 169-278 12-117 (155)
27 3iz5_Z 60S ribosomal protein L 99.0 4.7E-11 1.6E-15 110.7 0.2 83 169-254 14-96 (162)
28 4a17_T RPL24, 60S ribosomal pr 98.9 1.5E-10 5.1E-15 107.1 0.7 82 169-254 14-95 (158)
29 2zkr_u 60S ribosomal protein L 98.9 2.3E-10 8E-15 106.0 -0.1 82 168-254 11-93 (157)
30 2ast_A S-phase kinase-associat 98.0 1.3E-06 4.6E-11 82.4 2.5 60 20-83 3-65 (159)
31 1vq8_U 50S ribosomal protein L 98.0 8.8E-07 3E-11 70.7 0.2 53 168-221 11-63 (66)
32 4ajy_C Transcription elongatio 98.0 2.6E-06 9E-11 73.6 3.0 57 20-80 4-63 (97)
33 3j21_V 50S ribosomal protein L 97.6 1.6E-05 5.5E-10 63.4 1.1 50 169-219 13-62 (66)
34 1fs1_B SKP1, cyclin A/CDK2-ass 97.0 0.00025 8.5E-09 65.4 2.4 57 20-83 4-60 (141)
35 2yy9_A Zinc finger and BTB dom 97.0 0.00019 6.4E-09 65.3 1.3 102 211-357 14-120 (135)
36 1r29_A B-cell lymphoma 6 prote 96.8 0.00044 1.5E-08 61.9 2.2 102 211-355 18-126 (127)
37 1hv2_A Elongin C, ELC1; protei 96.8 0.00086 2.9E-08 58.1 3.9 61 19-83 5-65 (99)
38 3jyw_S 60S ribosomal protein L 96.8 0.00024 8E-09 52.4 0.2 35 175-210 11-45 (45)
39 2q81_A MIZ-1 protein; BTB/POZ 96.7 0.00067 2.3E-08 60.2 3.1 98 211-354 16-118 (119)
40 2p1m_A SKP1-like protein 1A; F 96.7 0.00017 5.7E-09 68.0 -1.2 58 20-83 6-63 (160)
41 2z8h_A Transcription regulator 96.7 0.00026 8.7E-09 64.6 -0.2 110 203-356 19-133 (138)
42 3b84_A Zinc finger and BTB dom 96.7 0.00047 1.6E-08 61.2 1.5 100 211-355 13-117 (119)
43 1buo_A POZ domain, protein (pr 96.7 0.00048 1.6E-08 61.2 1.5 103 204-355 12-120 (121)
44 2if5_A Zinc finger and BTB dom 96.6 0.00094 3.2E-08 59.0 3.0 100 211-353 14-120 (120)
45 2ppi_A Gigaxonin; BTB domain, 96.5 0.00059 2E-08 62.8 1.3 108 203-352 30-143 (144)
46 2vpk_A Myoneurin; transcriptio 96.4 0.0013 4.3E-08 57.9 2.7 100 211-353 11-115 (116)
47 2vkp_A BTB/POZ domain-containi 96.4 0.0013 4.4E-08 57.0 2.4 42 311-356 66-109 (109)
48 3ga1_A Nucleus accumbens-assoc 96.1 0.00078 2.7E-08 60.5 -0.6 100 211-356 22-128 (129)
49 3drz_A BTB/POZ domain-containi 96.1 0.0023 7.8E-08 56.1 2.4 85 20-109 8-103 (107)
50 2fnj_C Transcription elongatio 96.0 0.0031 1.1E-07 54.2 2.9 60 20-83 3-65 (96)
51 3m5b_A Zinc finger and BTB dom 96.0 0.0021 7.2E-08 57.2 1.8 91 217-354 25-117 (119)
52 2ihc_A Transcription regulator 96.0 0.00033 1.1E-08 62.7 -3.7 106 204-353 13-123 (124)
53 3ohu_A Transcription regulator 95.2 0.0013 4.5E-08 58.6 -2.6 98 211-352 21-125 (125)
54 1vcb_B Protein (elongin C); tu 90.7 0.13 4.4E-06 45.3 2.8 61 19-83 18-81 (112)
55 3fkc_A Transcriptional regulat 90.6 0.045 1.5E-06 48.1 -0.2 89 211-346 20-115 (116)
56 3drx_A BTB/POZ domain-containi 90.4 0.14 4.7E-06 49.8 3.0 88 20-112 14-112 (202)
57 3v7d_A Suppressor of kinetocho 90.1 0.15 5.1E-06 48.2 2.9 60 19-82 8-72 (169)
58 3hve_A Gigaxonin; ubiquitin, c 84.3 0.91 3.1E-05 44.9 5.0 31 406-436 101-131 (256)
59 3kvt_A Potassium channel prote 80.5 0.85 2.9E-05 40.2 2.7 78 20-102 7-92 (115)
60 2p1m_A SKP1-like protein 1A; F 78.6 0.82 2.8E-05 42.5 2.1 35 318-356 91-125 (160)
61 2ast_A S-phase kinase-associat 77.0 0.47 1.6E-05 44.1 -0.2 35 318-356 92-126 (159)
62 1fs1_B SKP1, cyclin A/CDK2-ass 71.6 0.76 2.6E-05 41.8 -0.2 35 318-356 87-121 (141)
63 2eqx_A Kelch repeat and BTB do 71.5 2.7 9.2E-05 35.9 3.4 40 318-361 6-45 (105)
64 1t1d_A Protein (potassium chan 70.6 1.5 5.3E-05 37.5 1.6 78 20-102 3-89 (100)
65 3i3n_A Kelch-like protein 11; 67.9 5.3 0.00018 39.9 5.2 83 3-86 18-107 (279)
66 1s1g_A Potassium voltage-gated 64.4 3.3 0.00011 36.9 2.5 76 19-102 14-99 (124)
67 2nz0_B Potassium voltage-gated 57.2 5 0.00017 36.5 2.4 76 19-102 36-121 (140)
68 3v7d_A Suppressor of kinetocho 51.3 3.3 0.00011 38.8 0.1 34 319-356 100-133 (169)
69 1nn7_A Potassium channel KV4.2 50.9 4 0.00014 35.1 0.6 75 20-102 2-86 (105)
70 3htm_A Speckle-type POZ protei 41.1 27 0.00092 31.5 4.7 78 361-444 90-172 (172)
71 4eoz_A Speckle-type POZ protei 36.5 20 0.00067 31.5 2.9 31 406-436 93-123 (145)
72 3hqi_A Speckle-type POZ protei 34.3 23 0.00077 35.7 3.3 54 385-444 259-312 (312)
73 2plx_B Peptide inhibitor; heli 20.6 96 0.0033 19.2 2.9 23 410-432 2-24 (26)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=5.8e-39 Score=331.97 Aligned_cols=151 Identities=17% Similarity=0.235 Sum_probs=139.0
Q ss_pred HHHHhhccCchHHHHHHHHhhhhcCchhhhhcccccccccccccCCCCCCCCCCCchhhhcccccCCCCCCCcchhcHHH
Q psy4929 332 LLTTARLFDEPQLAALCLDTIDKNTPDALAADGFTDKVVTLSSFSSSDGRKPSAPDSRCRSRLSANPGIEPSAWQANLTY 411 (633)
Q Consensus 332 lL~~Ad~f~~~~l~~~C~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~c~~~L~~~~~~~~~l~~~Nc~~ 411 (633)
++.+|++|+++.+.+.|.++|.+.+ +++||+.
T Consensus 115 ll~~A~~l~i~~L~~~c~~~L~~~l------------------------------------------------~~~n~~~ 146 (279)
T 3i3n_A 115 VLELADRFLLIRLKEFCGEFLKKKL------------------------------------------------HLSNCVA 146 (279)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC------------------------------------------------CTTTHHH
T ss_pred HHHHHHHHCcHHHHHHHHHHHHHcC------------------------------------------------CcchHHH
Confidence 8999999999999999999999887 4479999
Q ss_pred HHHHHhhcCChHHHHHHHHHHHhchHHHhcCCCCcccCHHHHHhhhcCCCcccc-HHHHHHHHHHHHhhhhcccCCCCCh
Q psy4929 412 HCAPARLFDEPQLAALCLDTIDKNTPDALAADGFTDVDRDTLCAVLERDTLRIR-EAKLFQAVIRWSEAECTRQSLPITP 490 (633)
Q Consensus 412 il~~A~~~~~~~L~~~c~~fI~~nf~~v~~seeFl~Ls~~~L~~iL~sD~L~v~-E~~Vf~AvlrW~~~ec~r~~~~~d~ 490 (633)
++.+|+.|++++|.+.|.+||.+||.+++++++|.+|+.+.|..+|++|+|+|. |.+||+||++|++| ++
T Consensus 147 i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~---------~~ 217 (279)
T 3i3n_A 147 IHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQR---------NA 217 (279)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHT---------TH
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHc---------CH
Confidence 999999999999999999999999999999999999999999999999999998 99999999999999 58
Q ss_pred hhHHhhHHhhhhcCCCCCCCHHHHhcCCCCCCCCCch-HH----HHHHhhhhhh
Q psy4929 491 ENQRAVLGPSLTLVRFPLMSVEEFAAGPAQSGLLEDS-QL----VRLFLYFHVE 539 (633)
Q Consensus 491 ~~R~~~l~~LL~~VRfplms~~~L~~~v~~~~ll~~~-~~----~~~~~y~~~~ 539 (633)
++|++++++||++||||+|++++|.+.+.+++++..+ .| .+++.||..+
T Consensus 218 ~~r~~~~~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~~ 271 (279)
T 3i3n_A 218 EERERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALR 271 (279)
T ss_dssp HHHTTTHHHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhccCc
Confidence 8999999999999999999999999999999988754 34 4455565544
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=1.8e-39 Score=331.46 Aligned_cols=232 Identities=16% Similarity=0.238 Sum_probs=192.8
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCC---CCCCeEEcCCCCHhhhhhhheec
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLA---TRSDEIELPDVEPAAFLALLRCS 79 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~---~~~~~I~l~dv~~~~f~~lL~yl 79 (633)
++.++++++++++.+|||+|.||| +.|+|||+|||++|+||++||.+++. +...+|.++++++++|+.+|+|+
T Consensus 17 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~ 92 (256)
T 3hve_A 17 RLLRALSSFREESRFCDAHLVLDG----EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYI 92 (256)
T ss_dssp HHHHHHHTCCC--CCCCEEEEETT----EEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcceEEEECC----EEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhc
Confidence 578899999999999999999998 89999999999999999999999773 56789999999999999999999
Q ss_pred ccCcchhhhhhhhhccccccCCchhhhhhhhhhhhhhccccccccccCCCcceEEEEEEEecCCceeecCCccccccCCC
Q psy4929 80 MTGKEQVVHRFQHIESRWGYSGTSDRIRFSVDRRIFVVGFGLYGCIHGPTEYDVQMQLVRTANGKVIAGNRTSFACDGST 159 (633)
Q Consensus 80 YTG~~~~~~rfq~la~~w~y~gl~d~i~f~vdk~I~i~gfglygs~~~~~~y~v~i~l~~~~~~~~l~~~~~~~~~d~~~ 159 (633)
|||++.+.
T Consensus 93 Yt~~~~i~------------------------------------------------------------------------ 100 (256)
T 3hve_A 93 FSGQIRLN------------------------------------------------------------------------ 100 (256)
T ss_dssp HHSCCCCC------------------------------------------------------------------------
T ss_pred cCCCCccc------------------------------------------------------------------------
Confidence 99986510
Q ss_pred cceeeecccceeecCCcEEEEeeeeeeeeccccccccccccccCCccccchhhhhhhhccCCccCcchhhhhccCCCccc
Q psy4929 160 FTSRVMFKEPVEVMPNISYTACATLKIFRFCRSKCHKLFKRKKNPRKTAWTKAYRKVRGKDLAVDPSFEFAKRRNVPLKY 239 (633)
Q Consensus 160 ~~~rv~f~~p~~~~~~~~y~~~a~~~~~~f~~~~c~k~~~~~~~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (633)
T Consensus 101 -------------------------------------------------------------------------------- 100 (256)
T 3hve_A 101 -------------------------------------------------------------------------------- 100 (256)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhhhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhheeeeecCcchhhhhhhhhhhhccceeeeceee
Q psy4929 240 DREFWNKTVEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQRDIAILNDPTEVIRAKKKKMVEAGIVEEIHEMQ 319 (633)
Q Consensus 240 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (633)
T Consensus 101 -------------------------------------------------------------------------------- 100 (256)
T 3hve_A 101 -------------------------------------------------------------------------------- 100 (256)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcCchhhhhcccccccccccccCCCCCCCCCCCchhhhcccccCCC
Q psy4929 320 IRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNTPDALAADGFTDKVVTLSSFSSSDGRKPSAPDSRCRSRLSANPG 399 (633)
Q Consensus 320 l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~c~~~L~~~~~ 399 (633)
.+|+. .++.+|++|+++.+.+.|.++|.+.+
T Consensus 101 --~~~v~----~ll~~A~~l~i~~l~~~c~~~L~~~l------------------------------------------- 131 (256)
T 3hve_A 101 --EDTIQ----DVVQAADLLLLTDLKTLCCEFLEGCI------------------------------------------- 131 (256)
T ss_dssp ---CCHH----HHHHHHHHHTCHHHHHHHHHHHHHTC-------------------------------------------
T ss_pred --HhHHH----HHHHHHHHHChHHHHHHHHHHHHhhC-------------------------------------------
Confidence 00111 28999999999999999999999887
Q ss_pred CCCCcchhcHHHHHHHHhhcCChHHHHHHHHHHHhchHHHhcCCCCcccCHHHHHhhhcCCCcccc-HHHHHHHHHHHHh
Q psy4929 400 IEPSAWQANLTYHCAPARLFDEPQLAALCLDTIDKNTPDALAADGFTDVDRDTLCAVLERDTLRIR-EAKLFQAVIRWSE 478 (633)
Q Consensus 400 ~~~~l~~~Nc~~il~~A~~~~~~~L~~~c~~fI~~nf~~v~~seeFl~Ls~~~L~~iL~sD~L~v~-E~~Vf~AvlrW~~ 478 (633)
+++||+.++.+|+.|++++|.+.|.+||.+||.+++++++|.+|+.+.|..||++|+|+|. |.+||+||++|++
T Consensus 132 -----~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~ 206 (256)
T 3hve_A 132 -----AAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIA 206 (256)
T ss_dssp -----CSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCC
T ss_pred -----CHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHH
Confidence 3479999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred hhhcccCCCCChhhHHhhHHhhhhcCCCCCCCHHHHhcCCCCCCCCCch--HHHHHH
Q psy4929 479 AECTRQSLPITPENQRAVLGPSLTLVRFPLMSVEEFAAGPAQSGLLEDS--QLVRLF 533 (633)
Q Consensus 479 ~ec~r~~~~~d~~~R~~~l~~LL~~VRfplms~~~L~~~v~~~~ll~~~--~~~~~~ 533 (633)
| ++++|++++++||++||||+|++++|.+.+++++++..+ +|++++
T Consensus 207 ~---------~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~~~~c~~ll 254 (256)
T 3hve_A 207 H---------DTEIRKVHMKDVMSALWVSGLDSSYLREQMLNEPLVREIVKECSNIP 254 (256)
T ss_dssp C-----------CCSTTTHHHHHHHHHHHTTCC-CHHHHHHTSTTHHHHHCC-----
T ss_pred c---------CHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhcChHHHhhHHHHHHHh
Confidence 9 478899999999999999999999999999999999876 477664
No 3
>3no8_A BTB/POZ domain-containing protein 2; PHR domain, BTBD1, BTBD2, PAM-highwire-RPM-1 domain, toposis regulation, protein structure initiative; 2.20A {Homo sapiens}
Probab=99.91 E-value=1.2e-25 Score=213.70 Aligned_cols=108 Identities=67% Similarity=1.170 Sum_probs=101.8
Q ss_pred cccCcchhhhhhhhhccccccCCchhhhhhhhhhhhhhccccccccccCCCcceEEEEEEEecCCceeecCCccccccCC
Q psy4929 79 SMTGKEQVVHRFQHIESRWGYSGTSDRIRFSVDRRIFVVGFGLYGCIHGPTEYDVQMQLVRTANGKVIAGNRTSFACDGS 158 (633)
Q Consensus 79 lYTG~~~~~~rfq~la~~w~y~gl~d~i~f~vdk~I~i~gfglygs~~~~~~y~v~i~l~~~~~~~~l~~~~~~~~~d~~ 158 (633)
.-+++.+.++|||+.+++|+|+|.+|+|+|+||++|+++||||||+++++++|+|+|++++..++++|+++++.|.|||+
T Consensus 9 ~l~~~~~~v~RFqs~~~~WgYsg~~DaI~F~Vdr~I~v~G~GLYGs~~g~~~Y~vkieL~~~~~~~vL~~~~~~f~~dgs 88 (176)
T 3no8_A 9 CLRGKECSINRFQQVESRWGYSGTSDRIRFSVNKRIFVVGFGLYGSIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGS 88 (176)
T ss_dssp ----CCEEEECCSEEEEEECCSSCCEEEEEEESSCEEEEEEEEECBSSSSEEEEEEEEEEETTTTEEEEEEEEEEEECSC
T ss_pred ccCcceeecccccccCCCCccCCCcceEEEEeCCeEEEEEEEeeccCCCCCccEEEEEEEecCCCcEEEEcceeeecCCC
Confidence 45677788899999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred CcceeeecccceeecCCcEEEEeeeeee
Q psy4929 159 TFTSRVMFKEPVEVMPNISYTACATLKI 186 (633)
Q Consensus 159 ~~~~rv~f~~p~~~~~~~~y~~~a~~~~ 186 (633)
.++|+|||++||+|.||++|+|||+++|
T Consensus 89 ~~~~~v~F~~PV~I~pn~~Yta~a~l~G 116 (176)
T 3no8_A 89 ASTFRVMFKEPVEVLPNVNYTACATLKG 116 (176)
T ss_dssp SCEEEEEEEEEEEECTTCCEEEEEEEES
T ss_pred CceEEEEcCCCeEcCCCCeEEEEEEeCC
Confidence 9999999999999999999999999998
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.87 E-value=1.8e-22 Score=192.80 Aligned_cols=79 Identities=28% Similarity=0.494 Sum_probs=74.2
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCC-CCCCeEEcCCCCHhhhhhhheeccc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLA-TRSDEIELPDVEPAAFLALLRCSMT 81 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~-~~~~~I~l~dv~~~~f~~lL~ylYT 81 (633)
++.+++.++++++.+|||+|++++ +.|+|||.||+++|+||++||.+++. +...+|.++++++++|+.+|+|+||
T Consensus 20 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt 95 (172)
T 3htm_A 20 RLADELGGLWENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYT 95 (172)
T ss_dssp CHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcceEEEECC----EEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhC
Confidence 688999999999999999999998 89999999999999999999999885 5678999999999999999999999
Q ss_pred Ccch
Q psy4929 82 GKEQ 85 (633)
Q Consensus 82 G~~~ 85 (633)
|++.
T Consensus 96 ~~~~ 99 (172)
T 3htm_A 96 GKAP 99 (172)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9865
No 5
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.82 E-value=1.1e-20 Score=197.87 Aligned_cols=79 Identities=28% Similarity=0.494 Sum_probs=71.4
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCC-CCCCeEEcCCCCHhhhhhhheeccc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLA-TRSDEIELPDVEPAAFLALLRCSMT 81 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~-~~~~~I~l~dv~~~~f~~lL~ylYT 81 (633)
+|.+++.++++++.+|||+|.|+| +.|+|||+|||++|+||++||.+++. +...+|.|+++++++|+.+|+|+||
T Consensus 160 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt 235 (312)
T 3hqi_A 160 RLADELGGLWENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYT 235 (312)
T ss_dssp CHHHHHHHHHHTTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCCCceEEEECC----EEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcC
Confidence 578999999999999999999998 89999999999999999999999884 6678999999999999999999999
Q ss_pred Ccch
Q psy4929 82 GKEQ 85 (633)
Q Consensus 82 G~~~ 85 (633)
|++.
T Consensus 236 ~~~~ 239 (312)
T 3hqi_A 236 GKAP 239 (312)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9865
No 6
>3gbw_A E3 ubiquitin-protein ligase mycbp2; MYC-binding protein 2, protein associated with MYC, PAM, RPM-1, PHR domain, structural genomics, PSI-2; HET: MSE; 1.32A {Mus musculus}
Probab=99.81 E-value=7.4e-21 Score=179.29 Aligned_cols=98 Identities=34% Similarity=0.633 Sum_probs=89.9
Q ss_pred hhhhhhhhccccccCCc-hhhhhhhhhhhhhhccccccccccCCCcceEEEEEEEe--------cCCceeecCCc-cccc
Q psy4929 86 VVHRFQHIESRWGYSGT-SDRIRFSVDRRIFVVGFGLYGCIHGPTEYDVQMQLVRT--------ANGKVIAGNRT-SFAC 155 (633)
Q Consensus 86 ~~~rfq~la~~w~y~gl-~d~i~f~vdk~I~i~gfglygs~~~~~~y~v~i~l~~~--------~~~~~l~~~~~-~~~~ 155 (633)
.++||++.+++|+|+|. +|+|+|+||++|+++|||||| ++++|+++|++++. .++++++++++ .|.|
T Consensus 7 ~v~RF~s~~~~W~Y~g~s~DaI~F~Vdr~I~l~G~GLYG---g~g~Y~~~iel~~~~~~~g~~~~~~~vl~~~~~~~~~~ 83 (164)
T 3gbw_A 7 VVNRFESHGGGWGYSAHSVEAIRFSADTDILLGGLGLFG---GRGEYTAKIKLFELGPDGGDHETDGDLLAETDVLAYDC 83 (164)
T ss_dssp EEECEEEECSCBCCCTTCCEEEEEEESSCEEEEEEEEEC---CSSCEEEEEEEEEEETTTTTSCCCCEEEEECCCEEECC
T ss_pred EEecccccCCCcccCCCCcceEEEEecCCEEEEEEEeec---CCCccEEEEEEEEcccCcccccccceEEeeccceeccC
Confidence 47899999999999999 699999999999999999999 89999999999973 35789999976 7888
Q ss_pred cCCCcceeeecccceeecCCcEEEEeeeeeee
Q psy4929 156 DGSTFTSRVMFKEPVEVMPNISYTACATLKIF 187 (633)
Q Consensus 156 d~~~~~~rv~f~~p~~~~~~~~y~~~a~~~~~ 187 (633)
|+ .++|+|||++||+|.||++|+|||+++|-
T Consensus 84 ~~-~~~~~v~F~~PV~i~pn~~Yta~a~l~G~ 114 (164)
T 3gbw_A 84 AA-REKYAMMFDEPVLLQAGWWYVAWARVSGP 114 (164)
T ss_dssp CT-TCEEEEEEEEEEEECTTCEEEEEEEEESS
T ss_pred CC-CcEEEEecCCceEcCCCCeEEEEEEeCCC
Confidence 65 79999999999999999999999999983
No 7
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=1.5e-19 Score=160.10 Aligned_cols=94 Identities=12% Similarity=0.118 Sum_probs=88.9
Q ss_pred CCCcchhcHHHHHHHHhhcCChHHHHHHHHHHHhchHHHhcCCCCcccCHHHHHhhhcCCCcccc-HHHHHHHHHHHHhh
Q psy4929 401 EPSAWQANLTYHCAPARLFDEPQLAALCLDTIDKNTPDALAADGFTDVDRDTLCAVLERDTLRIR-EAKLFQAVIRWSEA 479 (633)
Q Consensus 401 ~~~l~~~Nc~~il~~A~~~~~~~L~~~c~~fI~~nf~~v~~seeFl~Ls~~~L~~iL~sD~L~v~-E~~Vf~AvlrW~~~ 479 (633)
...++++||++++.+|+.|+|++|.+.|.+||.+||.+|+++++|++||.++|..+|++| |. |.+||+||++|++|
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~ 81 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINF 81 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHc
Confidence 345788999999999999999999999999999999999999999999999999999998 55 99999999999999
Q ss_pred hhcccCCCCChhhHHhhHHhhhhcCCC
Q psy4929 480 ECTRQSLPITPENQRAVLGPSLTLVRF 506 (633)
Q Consensus 480 ec~r~~~~~d~~~R~~~l~~LL~~VRf 506 (633)
|+++|.+++++||++||+
T Consensus 82 ---------d~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 82 ---------NKEEREAFAESLRTSLKE 99 (105)
T ss_dssp ---------THHHHHHHHHHHHHHCCE
T ss_pred ---------CHHHHHHHHHHHHHHHHH
Confidence 588999999999999995
No 8
>3hwj_A E3 ubiquitin-protein ligase mycbp2; MYC-binding protein 2, PHR proteins, PHR domain, protein associated with MYC, PAM, PHR1, structural genomics; 2.25A {Mus musculus}
Probab=99.75 E-value=1.9e-19 Score=170.73 Aligned_cols=99 Identities=24% Similarity=0.447 Sum_probs=88.9
Q ss_pred hhhhhhhc--cccccC-Cchhhhhhhhhhh-hhhccccccccccCCCcceEEEEEEE---------ecCCceeecCCccc
Q psy4929 87 VHRFQHIE--SRWGYS-GTSDRIRFSVDRR-IFVVGFGLYGCIHGPTEYDVQMQLVR---------TANGKVIAGNRTSF 153 (633)
Q Consensus 87 ~~rfq~la--~~w~y~-gl~d~i~f~vdk~-I~i~gfglygs~~~~~~y~v~i~l~~---------~~~~~~l~~~~~~~ 153 (633)
++||++.. .+|+|+ |.+|+|+|+||++ |+++||||||+ +|+.+|.++|++.+ ....++|++++++|
T Consensus 3 v~RF~~~~~~~~W~ys~gs~DaI~F~VDr~~I~l~G~GLYG~-~G~~~y~v~i~~~~~~~~gd~~~~~~~~~l~~~~~~f 81 (172)
T 3hwj_A 3 LNRFTKTSQGRSWNTGNGSPDAICFAVDKPGIVVVGFAVYGG-GGIHEYELEVLVDDSEHAGDSTHSHRWTSLELVKGTY 81 (172)
T ss_dssp CCSEEEECSSSCBCCGGGCCEEEEEEESSSCEEEEEEEEECC-SSCEEEEEEEEEC------------CCEEEEEEEEEE
T ss_pred cccccccccCCCcCCCCCCcceEEEEEcCCCEEEEEEEeecC-CCCccEEEEEEEeccccCccccccccceEeeeeeeeE
Confidence 57999766 599998 9999999999995 99999999999 79999999999984 22447999999999
Q ss_pred cccCCCcc-eeeecccceeecCCcEEEEeeeeee
Q psy4929 154 ACDGSTFT-SRVMFKEPVEVMPNISYTACATLKI 186 (633)
Q Consensus 154 ~~d~~~~~-~rv~f~~p~~~~~~~~y~~~a~~~~ 186 (633)
.+|+++++ ++|||++||+|.||++|+|||+++|
T Consensus 82 ~~d~~~~~~~~v~F~~pV~i~pn~~Yta~a~l~G 115 (172)
T 3hwj_A 82 TTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 115 (172)
T ss_dssp CCTTSSCSEEEEEEEEEEECCTTCCEEEEEEEES
T ss_pred ecCCCCCeeEEEEcCCcEEcCCCCeEEEEEEeCC
Confidence 99998886 7999999999999999999999998
No 9
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.74 E-value=2.4e-19 Score=166.25 Aligned_cols=79 Identities=28% Similarity=0.494 Sum_probs=73.9
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCC-CCCCeEEcCCCCHhhhhhhheeccc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLA-TRSDEIELPDVEPAAFLALLRCSMT 81 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~-~~~~~I~l~dv~~~~f~~lL~ylYT 81 (633)
++.++++++++++.+|||+|.++| +.|+|||.||+++|+||++||.+++. +....|.++++++++|+.+|+|+||
T Consensus 11 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~ 86 (145)
T 4eoz_A 11 RLADELGGLWENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYT 86 (145)
T ss_dssp CHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcceEEEECC----EEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhcc
Confidence 688999999999999999999998 89999999999999999999999874 4568999999999999999999999
Q ss_pred Ccch
Q psy4929 82 GKEQ 85 (633)
Q Consensus 82 G~~~ 85 (633)
|++.
T Consensus 87 ~~~~ 90 (145)
T 4eoz_A 87 GKAP 90 (145)
T ss_dssp SCCT
T ss_pred CccC
Confidence 9865
No 10
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.70 E-value=3.2e-18 Score=154.18 Aligned_cols=102 Identities=22% Similarity=0.243 Sum_probs=88.3
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCC-CCCCeEEcCCCCHhhhhhhheeccc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLA-TRSDEIELPDVEPAAFLALLRCSMT 81 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~-~~~~~I~l~dv~~~~f~~lL~ylYT 81 (633)
++.+.++++++++.+|||+|.+++ +.|+|||+|||++|+||++||.+++. +....|.++++++++|+.+|+|+||
T Consensus 11 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt 86 (120)
T 2if5_A 11 DILSGLNEQRTQGLLCDVVILVEG----REFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYT 86 (120)
T ss_dssp HHHHHHHHHHHTTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCeEEEECC----EEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcC
Confidence 578899999999999999999998 89999999999999999999999885 6678999999999999999999999
Q ss_pred Ccchh----hhhhhhhccccccCCchhhhhh
Q psy4929 82 GKEQV----VHRFQHIESRWGYSGTSDRIRF 108 (633)
Q Consensus 82 G~~~~----~~rfq~la~~w~y~gl~d~i~f 108 (633)
|++.+ +.....+|..|++.++.+.|.-
T Consensus 87 ~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~ 117 (120)
T 2if5_A 87 ATLTVSTANVGDILSAARLLEIPAVSHVCAD 117 (120)
T ss_dssp SCCCCCGGGHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99865 3456677888998888777653
No 11
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.70 E-value=5.2e-18 Score=154.43 Aligned_cols=102 Identities=25% Similarity=0.319 Sum_probs=92.2
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEc-CCCCHhhhhhhheeccc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIEL-PDVEPAAFLALLRCSMT 81 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l-~dv~~~~f~~lL~ylYT 81 (633)
++.++++++++++.+|||+|.+++ +.|+|||+|||++|+||++||.+++......|.| +++++++|+.+|+|+||
T Consensus 15 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f~~ll~~~Yt 90 (127)
T 1r29_A 15 DVLLNLNRLRSRDILTDVVIVVSR----EQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYT 90 (127)
T ss_dssp HHHHHHHHHHHTTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEECC----EEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHHHHHHHHHHcC
Confidence 578899999999999999999998 8999999999999999999999988667889999 99999999999999999
Q ss_pred Ccchh----hhhhhhhccccccCCchhhhhh
Q psy4929 82 GKEQV----VHRFQHIESRWGYSGTSDRIRF 108 (633)
Q Consensus 82 G~~~~----~~rfq~la~~w~y~gl~d~i~f 108 (633)
|++.+ +..+..+|..|++.++.+.|.-
T Consensus 91 g~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~ 121 (127)
T 1r29_A 91 SRLNLREGNIMAVMATAMYLQMEHVVDTCRK 121 (127)
T ss_dssp SCCCCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99866 3467788889999888877754
No 12
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.69 E-value=3.3e-18 Score=154.26 Aligned_cols=99 Identities=18% Similarity=0.167 Sum_probs=89.3
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccC
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTG 82 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG 82 (633)
++.++++++++++.+|||+|.++| +.|+|||+|||++|+||++||.+++ ...|.++++++++|+.+|+|+|||
T Consensus 10 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~~~~f~~ll~~iYtg 82 (119)
T 3b84_A 10 RVLQELNKQREKGQYCDATLDVGG----LVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGFAEIFGLLLDFFYTG 82 (119)
T ss_dssp HHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCcceEEEECC----EEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCCHHHHHHHHHHHcCC
Confidence 577899999999999999999998 8999999999999999999999876 678999999999999999999999
Q ss_pred cchh----hhhhhhhccccccCCchhhhhh
Q psy4929 83 KEQV----VHRFQHIESRWGYSGTSDRIRF 108 (633)
Q Consensus 83 ~~~~----~~rfq~la~~w~y~gl~d~i~f 108 (633)
++.+ +.....+|..++..++.+.|.-
T Consensus 83 ~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~ 112 (119)
T 3b84_A 83 HLALTSGNRDQVLLAARELRVPEAVELCQS 112 (119)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 9866 3467778889999888877764
No 13
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.69 E-value=7e-18 Score=153.17 Aligned_cols=100 Identities=25% Similarity=0.284 Sum_probs=89.1
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCC-CCHhhhhhhheeccc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPD-VEPAAFLALLRCSMT 81 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~d-v~~~~f~~lL~ylYT 81 (633)
++.+.++++++++.+|||+|++++ +.|+|||+|||++|+||++||.+++.. ...|.+++ +++++|+.+|+|+||
T Consensus 18 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~~~~f~~~l~~iYt 92 (125)
T 3ohu_A 18 NILLGLNDQRKKDILCDVTLIVER----KEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVTARGFGPLLQFAYT 92 (125)
T ss_dssp HHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCccceEEEECC----EEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCCHHHHHHHHHhHcC
Confidence 578899999999999999999998 899999999999999999999998754 78899998 999999999999999
Q ss_pred Ccchh----hhhhhhhccccccCCchhhhh
Q psy4929 82 GKEQV----VHRFQHIESRWGYSGTSDRIR 107 (633)
Q Consensus 82 G~~~~----~~rfq~la~~w~y~gl~d~i~ 107 (633)
|++.+ +..+..+|..|++.++.+.|.
T Consensus 93 g~~~~~~~~v~~ll~~A~~l~i~~L~~~C~ 122 (125)
T 3ohu_A 93 AKLLLSRENIREVIRCAEFLRMHNLEDSCF 122 (125)
T ss_dssp SEEEECTTTHHHHHHHHHHHTBSSCTTSSC
T ss_pred CceEECHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99876 345777788888888876653
No 14
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.68 E-value=5.8e-18 Score=149.65 Aligned_cols=100 Identities=41% Similarity=0.638 Sum_probs=82.0
Q ss_pred HHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccCcchh----
Q psy4929 11 MFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTGKEQV---- 86 (633)
Q Consensus 11 l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG~~~~---- 86 (633)
|++++.+|||+|+++++++.+.|+|||.|||++|+||++||.++|..+...|.++++++++|+.+|+|+|||++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~~ 81 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLEADT 81 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------CCEEEETTSCHHHHHHHHHHHHHCCCCCCTTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCCCeEEeCCCCHHHHHHHHHHHcCCCccCCHHH
Confidence 6789999999999998545579999999999999999999999886434899999999999999999999999866
Q ss_pred hhhhhhhccccccCCchhhhhhhh
Q psy4929 87 VHRFQHIESRWGYSGTSDRIRFSV 110 (633)
Q Consensus 87 ~~rfq~la~~w~y~gl~d~i~f~v 110 (633)
+.....+|..|+..++.+.|.-.+
T Consensus 82 ~~~ll~~A~~~~~~~L~~~c~~~l 105 (109)
T 2vkp_A 82 VLATLYAAKKYIVPALAKACVNFL 105 (109)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHH
Confidence 345667888899988887775433
No 15
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.68 E-value=9e-18 Score=156.76 Aligned_cols=101 Identities=13% Similarity=0.220 Sum_probs=87.4
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCC---CCCCeEEcCCCCHhhhhhhheec
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLA---TRSDEIELPDVEPAAFLALLRCS 79 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~---~~~~~I~l~dv~~~~f~~lL~yl 79 (633)
++.++++++++++.+|||+|+++| +.|+|||+|||++|+||++||.+++. +....|.|+++++++|+.+|+|+
T Consensus 33 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fi 108 (144)
T 2ppi_A 33 RLLRALSSFREESRFCDAHLVLDG----EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYI 108 (144)
T ss_dssp HHHHHHHHTTC--CCCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcceEEEECC----EEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHH
Confidence 578899999999999999999998 89999999999999999999999874 46789999999999999999999
Q ss_pred ccCcchh----hhhhhhhccccccCCchhhhh
Q psy4929 80 MTGKEQV----VHRFQHIESRWGYSGTSDRIR 107 (633)
Q Consensus 80 YTG~~~~----~~rfq~la~~w~y~gl~d~i~ 107 (633)
|||++.+ +..+..+|..|++.++.+.|.
T Consensus 109 Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~ 140 (144)
T 2ppi_A 109 FSGQIRLNEDTIQDVVQAADLLLLTDLKTLCC 140 (144)
T ss_dssp TTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 9999866 345677788888888877764
No 16
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.67 E-value=7.8e-18 Score=155.35 Aligned_cols=104 Identities=17% Similarity=0.145 Sum_probs=88.8
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccC
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTG 82 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG 82 (633)
++.+.++++++++.+|||+|++++ +.|+|||+|||++|+||++||.+++ ..+|.|+++++++|+.+|+|+|||
T Consensus 11 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~~~~f~~lL~fiYtg 83 (135)
T 2yy9_A 11 RVLQELNKQREKGQYCDATLDVGG----LVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGFAEIFGLLLDFFYTG 83 (135)
T ss_dssp HHHHHHHHHHHTTTTCCEEEEETT----EEEEECHHHHHHHCHHHHHTCC-------CCEEECGGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCcceEEEECC----EEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCCHHHHHHHHHHHhCC
Confidence 578899999999999999999998 9999999999999999999999876 678999999999999999999999
Q ss_pred cchh----hhhhhhhccccccCCchhhhhhhhhhh
Q psy4929 83 KEQV----VHRFQHIESRWGYSGTSDRIRFSVDRR 113 (633)
Q Consensus 83 ~~~~----~~rfq~la~~w~y~gl~d~i~f~vdk~ 113 (633)
++.+ +..+..+|..+++.++.+.|...+.+.
T Consensus 84 ~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~ 118 (135)
T 2yy9_A 84 HLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQT 118 (135)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC--
T ss_pred CCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh
Confidence 9876 346778889999999988887555443
No 17
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.67 E-value=1.4e-17 Score=149.23 Aligned_cols=99 Identities=23% Similarity=0.351 Sum_probs=87.6
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcC--CCCHhhhhhhheecc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELP--DVEPAAFLALLRCSM 80 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~--dv~~~~f~~lL~ylY 80 (633)
++.++++++++++.+|||+|.++| +.|+|||.|||++|+||++||.++ ....|.|+ ++++++|+.+|+|+|
T Consensus 8 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~~~~f~~ll~~~Y 80 (116)
T 2vpk_A 8 HLLERLNKQREAGFLCDCTIVIGE----FQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVKADGFQKLLEFIY 80 (116)
T ss_dssp HHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcEEEEECC----EEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCCHHHHHHHHHHHc
Confidence 578899999999999999999998 899999999999999999999986 46778888 999999999999999
Q ss_pred cCcchh----hhhhhhhccccccCCchhhhhh
Q psy4929 81 TGKEQV----VHRFQHIESRWGYSGTSDRIRF 108 (633)
Q Consensus 81 TG~~~~----~~rfq~la~~w~y~gl~d~i~f 108 (633)
||++.+ +.....+|..+++.++.+.|.-
T Consensus 81 t~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~ 112 (116)
T 2vpk_A 81 TGTLNLDSWNVKEIHQAADYLKVEEVVTKCKI 112 (116)
T ss_dssp HSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999876 3456677888988888777653
No 18
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.67 E-value=1.1e-17 Score=151.12 Aligned_cols=101 Identities=22% Similarity=0.250 Sum_probs=89.0
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccC
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTG 82 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG 82 (633)
++.+.++++++++.+|||+|.++| +.|+|||+|||++|+||++||.+ +..+|.++++++++|+.+|+|+|||
T Consensus 14 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~~f~~----~~~~i~l~~~~~~~f~~ll~~~Ytg 85 (121)
T 1buo_A 14 GLLCKANQMRLAGTLCDVVIMVDS----QEFHAHRTVLACTSKMFEILFHR----NSQHYTLDFLSPKTFQQILEYAYTA 85 (121)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEESS----CEEEECHHHHHHHCHHHHHHTTS----CCSEEEECSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCCCEEEEECC----EEEehhHHHHhhcCHHHHHHHcC----CCcEEEeCCCCHHHHHHHHHhhcCC
Confidence 578899999999999999999998 89999999999999999999986 4678999999999999999999999
Q ss_pred cchh----hhhhhhhccccccCCchhhhhhhhh
Q psy4929 83 KEQV----VHRFQHIESRWGYSGTSDRIRFSVD 111 (633)
Q Consensus 83 ~~~~----~~rfq~la~~w~y~gl~d~i~f~vd 111 (633)
++.+ +.....+|..++..++.+.|.-.+.
T Consensus 86 ~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 118 (121)
T 1buo_A 86 TLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLE 118 (121)
T ss_dssp CCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 9866 3456677888999888877764443
No 19
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.67 E-value=1.4e-17 Score=151.33 Aligned_cols=101 Identities=25% Similarity=0.267 Sum_probs=88.0
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcC-CCCHhhhhhhheeccc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELP-DVEPAAFLALLRCSMT 81 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~-dv~~~~f~~lL~ylYT 81 (633)
++.++++++++++.+|||+|.++| +.|+|||+|||++|+||++||.+++. ....|.++ ++++++|+.+|+|+||
T Consensus 15 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~vLaa~S~yF~~mf~~~~~-e~~~i~l~~~v~~~~f~~lL~~iYt 89 (124)
T 2ihc_A 15 NVLLSLNDQRKKDVLCDVTIFVEG----QRFRAHRSVLAACSSYFHSRIVGQAD-GELNITLPEEVTVKGFEPLIQFAYT 89 (124)
T ss_dssp HHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHBHHHHHHHTTC----CEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcCEEEEECC----EEEecHHHHHHHcCHHHHHHHcCCCC-CCceEeecCCcCHHHHHHHHHHhcC
Confidence 578899999999999999999998 89999999999999999999999874 34689995 9999999999999999
Q ss_pred Ccchh----hhhhhhhccccccCCchhhhhh
Q psy4929 82 GKEQV----VHRFQHIESRWGYSGTSDRIRF 108 (633)
Q Consensus 82 G~~~~----~~rfq~la~~w~y~gl~d~i~f 108 (633)
|++.+ +..+..+|..++..++.+.|.-
T Consensus 90 g~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~ 120 (124)
T 2ihc_A 90 AKLILSKENVDEVCKCVEFLSVHNIEESCFQ 120 (124)
T ss_dssp SEEEEETTTHHHHHHHHHHHTBSSCCGGGGG
T ss_pred CCcccCHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 99866 4467788889999998877753
No 20
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.67 E-value=1.7e-17 Score=153.44 Aligned_cols=106 Identities=23% Similarity=0.249 Sum_probs=93.1
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcC-CCCHhhhhhhheeccc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELP-DVEPAAFLALLRCSMT 81 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~-dv~~~~f~~lL~ylYT 81 (633)
++.++++++++++.+|||+|+++| +.|+|||+|||++|+||++||.+++. ....|.++ ++++++|+.+|+|+||
T Consensus 22 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~~f~~~~~-e~~~i~l~~~v~~~~~~~lL~~~Yt 96 (138)
T 2z8h_A 22 NVLLSLNDQRKKDVLCDVTVLVEG----QRFRAHRSVLAACSSYFHSRIVGQTD-AELTVTLPEEVTVKGFEPLIQFAYT 96 (138)
T ss_dssp HHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHTTCCC-TTEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcCeEEEECC----EEEechHHHHHHcCHHHHHHHhcCCC-CCceEEeCCCCCHHHHHHHHHHhcC
Confidence 578899999999999999999998 89999999999999999999999874 34689995 9999999999999999
Q ss_pred Ccchh----hhhhhhhccccccCCchhhhhhhhhhh
Q psy4929 82 GKEQV----VHRFQHIESRWGYSGTSDRIRFSVDRR 113 (633)
Q Consensus 82 G~~~~----~~rfq~la~~w~y~gl~d~i~f~vdk~ 113 (633)
|++.+ +..+..+|..|+..++.+.|.-.+.+.
T Consensus 97 g~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 132 (138)
T 2z8h_A 97 AKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFK 132 (138)
T ss_dssp SCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCC
T ss_pred CCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99866 456778889999999988887545443
No 21
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.65 E-value=3.3e-17 Score=149.73 Aligned_cols=99 Identities=25% Similarity=0.345 Sum_probs=87.3
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcC-CCCHhhhhhhheeccc
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELP-DVEPAAFLALLRCSMT 81 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~-dv~~~~f~~lL~ylYT 81 (633)
++.+.++++++++.+|||+|.|+| +.|+|||+|||++|+||++||.++ ...+|.|+ ++++++|+.+|+|+||
T Consensus 19 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~~~~f~~ll~~iYt 91 (129)
T 3ga1_A 19 SILECLNEQRLQGLYCDVSVVVKG----HAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQPQSFQQILSFCYT 91 (129)
T ss_dssp HHHHHHHHHHHTTCSCCEEEEETT----EEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcceEEEECC----EEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCCHHHHHHHHHHHhC
Confidence 478899999999999999999998 899999999999999999999985 67899997 9999999999999999
Q ss_pred Ccchh----hhhhhhhccccccCCchhhhhh
Q psy4929 82 GKEQV----VHRFQHIESRWGYSGTSDRIRF 108 (633)
Q Consensus 82 G~~~~----~~rfq~la~~w~y~gl~d~i~f 108 (633)
|++.+ +..+..+|..++..++.+.|.-
T Consensus 92 g~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~ 122 (129)
T 3ga1_A 92 GRLSMNVGDQDLLMYTAGFLQIQEIMEKGTE 122 (129)
T ss_dssp SEEECCTTTHHHHHHHHHHTTBTTSSCC---
T ss_pred CccccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99876 3457778889999988877754
No 22
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.64 E-value=4.8e-17 Score=146.24 Aligned_cols=93 Identities=20% Similarity=0.314 Sum_probs=80.3
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccC
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTG 82 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG 82 (633)
++.+.++++++++.+|||+|.++| +.|+|||+|||++|+||++||.++ ..+|.++++++++|+.+|+|+|||
T Consensus 17 ~l~~~l~~~~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~~~~f~~~l~~~Ytg 88 (116)
T 3fkc_A 17 SLLNSLNEQRGHGLFCDVTVIVED----RKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIRAEIFAEILNYIYSS 88 (116)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEETT----EEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCCceeEEEEECC----EEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCCHHHHHHHHHhhcCC
Confidence 577899999999999999999998 899999999999999999999874 679999999999999999999999
Q ss_pred cc-hh----hhhhhhhccccccCCch
Q psy4929 83 KE-QV----VHRFQHIESRWGYSGTS 103 (633)
Q Consensus 83 ~~-~~----~~rfq~la~~w~y~gl~ 103 (633)
++ .+ +..+..+|..+++.++.
T Consensus 89 ~~~~~~~~~~~~ll~~A~~l~i~~L~ 114 (116)
T 3fkc_A 89 KIVRVRSDLLDELIKSGQLLGVKFIA 114 (116)
T ss_dssp CCCSCCHHHHHHHHHHHHHHTCHHHH
T ss_pred CcCCCCHHHHHHHHHHHHHhCccccC
Confidence 98 44 23455666666665543
No 23
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.63 E-value=2.3e-17 Score=148.78 Aligned_cols=98 Identities=21% Similarity=0.248 Sum_probs=87.3
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccC
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTG 82 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG 82 (633)
++.++++++++++.+|||+|++++ +.|+|||.|||++|+||++||.+ +...|.++++++++|+.+|+|+|||
T Consensus 13 ~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~vLaa~S~yF~~~f~~----~~~~i~l~~~~~~~f~~ll~~~Ytg 84 (119)
T 2q81_A 13 HVLEQLNQQRQLGLLCDCTFVVDG----VHFKAHKAVLAACSEYFKMLFVD----QKDVVHLDISNAAGLGQVLEFMYTA 84 (119)
T ss_dssp HHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHH----CCSGGGGGGCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCcceEEEECC----EEEehhHHHHHHcCHHHHHHHcC----CCCEEEeCCCCHHHHHHHHHHHcCC
Confidence 577899999999999999999999 89999999999999999999997 4567889999999999999999999
Q ss_pred cchh----hhhhhhhccccccCCchhhhhh
Q psy4929 83 KEQV----VHRFQHIESRWGYSGTSDRIRF 108 (633)
Q Consensus 83 ~~~~----~~rfq~la~~w~y~gl~d~i~f 108 (633)
++.+ +.....+|..+++.++.+.|.-
T Consensus 85 ~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~ 114 (119)
T 2q81_A 85 KLSLSPENVDDVLAVATFLQMQDIITACHA 114 (119)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9876 3467778888999888877753
No 24
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.54 E-value=1.4e-15 Score=137.40 Aligned_cols=93 Identities=22% Similarity=0.244 Sum_probs=78.5
Q ss_pred HHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccCc
Q psy4929 4 VKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTGK 83 (633)
Q Consensus 4 l~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG~ 83 (633)
+.+.++ +.++.+|||+|+|+| +.|+|||+|||++|+||++ ....|.++++++++|+.+|+|+|||+
T Consensus 19 ~l~~l~--r~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~~~~f~~ll~fiYtg~ 84 (119)
T 3m5b_A 19 LVQLAA--RLRPALCDTLITVGS----QEFPAHSLVLAGVSQQLGR--------RGQWALGEGISPSTFAQLLNFVYGES 84 (119)
T ss_dssp HHHHHH--HHTTTTCCEEEEETT----EEEEECHHHHHTTCGGGCC--------CEEEECCSSCCHHHHHHHHHHHTTCC
T ss_pred HHHHHH--HhcCCCcceEEEECC----EEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 444554 567899999999998 9999999999999999985 35679999999999999999999999
Q ss_pred chh----hhhhhhhccccccCCchhhhhhhh
Q psy4929 84 EQV----VHRFQHIESRWGYSGTSDRIRFSV 110 (633)
Q Consensus 84 ~~~----~~rfq~la~~w~y~gl~d~i~f~v 110 (633)
+.+ +..+..+|..+++.++.+.|.-.+
T Consensus 85 ~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~ 115 (119)
T 3m5b_A 85 VELQPGELRPLQEAARALGVQSLEEACWRAR 115 (119)
T ss_dssp EEECGGGHHHHHHHHHHTTCHHHHHHHHHHC
T ss_pred cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 876 345777788899988887776543
No 25
>3no8_A BTB/POZ domain-containing protein 2; PHR domain, BTBD1, BTBD2, PAM-highwire-RPM-1 domain, toposis regulation, protein structure initiative; 2.20A {Homo sapiens}
Probab=99.16 E-value=7.8e-12 Score=118.93 Aligned_cols=50 Identities=48% Similarity=0.844 Sum_probs=37.8
Q ss_pred cCCCcccCCCCceeeeccccccCcccccCCCccEEEEecceeeeeeeeee
Q psy4929 574 FDGPRCSMTGKEQVVHRFQHIESRWGYSGTSDRIRGLIEGAVIREVLLFI 623 (633)
Q Consensus 574 ~~~~R~g~~~~~~~v~rf~~~~~~w~~~~~~~~i~~~~~~~~~~~~~~~~ 623 (633)
++.|||||++++|+|+|||+.+++|+|+|++|+|+|+|||+||+.++-..
T Consensus 3 ~~~~r~~l~~~~~~v~RFqs~~~~WgYsg~~DaI~F~Vdr~I~v~G~GLY 52 (176)
T 3no8_A 3 LDRPRCCLRGKECSINRFQQVESRWGYSGTSDRIRFSVNKRIFVVGFGLY 52 (176)
T ss_dssp ----------CCEEEECCSEEEEEECCSSCCEEEEEEESSCEEEEEEEEE
T ss_pred CCccccccCcceeecccccccCCCCccCCCcceEEEEeCCeEEEEEEEee
Confidence 56899999999999999999999999999999999999999999987543
No 26
>3izc_Z 60S ribosomal protein RPL24 (L24E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_Z 3o58_V 3o5h_V 3u5e_W 3u5i_W 4b6a_W 1s1i_S 2x7n_D
Probab=99.12 E-value=4.5e-12 Score=117.08 Aligned_cols=106 Identities=27% Similarity=0.427 Sum_probs=52.5
Q ss_pred ceeecCCcEEEEeeeeeeeeccccccccccccccCCccccchhhhhhhhccCCccCcchhhhhccCCCccchhhhhhhhh
Q psy4929 169 PVEVMPNISYTACATLKIFRFCRSKCHKLFKRKKNPRKTAWTKAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKTV 248 (633)
Q Consensus 169 p~~~~~~~~y~~~a~~~~~~f~~~~c~k~~~~~~~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 248 (633)
|++-.-|.-|+ .-+.+.|.|++++||++|+.+++|+++.||..||+.+++.+..|++ ++++++|.+|+|++++.++
T Consensus 12 ~IyPG~G~~fV-r~Dgkvf~FcssKC~k~f~~krnPRkl~WT~~yRr~~kK~~~~e~~---kkR~~~~vK~~R~ivg~sl 87 (155)
T 3izc_Z 12 KIYPGRGTLFV-RGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVA---KKRSRKTVKAQRPITGASL 87 (155)
T ss_dssp EECTTCCEEEE-CTTCCEEEESSHHHHHHHHHTCCHHHHSSSCSCCCCCCCCCCCSCC---CCCCC--------------
T ss_pred cccCCCCeEEE-ecCCCEEEEEcHHHHHHHHhccCcccchhHHHHHHHhCCchhhHHH---HHHhcCCccchHHHHHhhH
Confidence 33333344554 3678889999999999999999999999999999999999999988 7888999999999999999
Q ss_pred hhhhhhccccccchhhHHHHHhhhhhhhhh
Q psy4929 249 EAIKKVEHIKTKRHNLYLAQRLRKAREVET 278 (633)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (633)
++|.....+.+..........++..++...
T Consensus 88 ~~Ik~~r~~k~e~r~a~r~~aik~~Kekkk 117 (155)
T 3izc_Z 88 DLIKERRSLKPEVRKANREEKLKANKEKKK 117 (155)
T ss_dssp ------------------------------
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888888888888887777544
No 27
>3iz5_Z 60S ribosomal protein L24 (L24E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Z
Probab=98.99 E-value=4.7e-11 Score=110.73 Aligned_cols=83 Identities=30% Similarity=0.524 Sum_probs=52.5
Q ss_pred ceeecCCcEEEEeeeeeeeeccccccccccccccCCccccchhhhhhhhccCCccCcchhhhhccCCCccchhhhhhhhh
Q psy4929 169 PVEVMPNISYTACATLKIFRFCRSKCHKLFKRKKNPRKTAWTKAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKTV 248 (633)
Q Consensus 169 p~~~~~~~~y~~~a~~~~~~f~~~~c~k~~~~~~~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 248 (633)
+++---|.-|+ .-+.+.|.|++++||++|+.+++|+++.||..||+.+.+.+..|.+ ++++||.|.+|+|++++.++
T Consensus 14 ~IyPG~G~~fV-r~Dgkvf~FcssKC~k~f~~krnPRKl~WT~~yRr~~kK~~~~e~~--~krrR~~~~k~qRaivg~sL 90 (162)
T 3iz5_Z 14 KIYPGKGIRFI-RADSQVFLFANSKCKRYFHNRLKPAKLTWTAMYRKQHKKDIHAEAV--KKRRRTTKKPYSRSIVGATL 90 (162)
T ss_dssp EECSSCSEEEE-CTTSCEEEECSHHHHHHHHHTCCGGGTSSSCSCCCCCCCCCCSSSS--SSSCC---------------
T ss_pred cccCCCCeEEE-ecCCCEEEEECHHHHHHHHcccCcccchhHHHHHHHhccchhhHHH--HHHHhcCCccccHHHHHhhH
Confidence 33333344554 3678889999999999999999999999999999999999999998 48888999999999999999
Q ss_pred hhhhhh
Q psy4929 249 EAIKKV 254 (633)
Q Consensus 249 ~~~~~~ 254 (633)
++|...
T Consensus 91 ~~I~~k 96 (162)
T 3iz5_Z 91 EVIQKK 96 (162)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 999887
No 28
>4a17_T RPL24, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_T 4a1c_T 4a1e_T
Probab=98.92 E-value=1.5e-10 Score=107.10 Aligned_cols=82 Identities=22% Similarity=0.237 Sum_probs=40.7
Q ss_pred ceeecCCcEEEEeeeeeeeeccccccccccccccCCccccchhhhhhhhccCCccCcchhhhhccCCCccchhhhhhhhh
Q psy4929 169 PVEVMPNISYTACATLKIFRFCRSKCHKLFKRKKNPRKTAWTKAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKTV 248 (633)
Q Consensus 169 p~~~~~~~~y~~~a~~~~~~f~~~~c~k~~~~~~~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 248 (633)
|++-.-|.-|+ .-+.+.|.|++++||++|+.+++|+++.||..||+.+++.+..|++ .+++++|.+|+|++++.|+
T Consensus 14 ~IyPG~G~~fV-r~Dgkvf~FcssKC~k~f~~krnPRkl~WT~~yRr~~kK~~~~e~~---kkr~~r~vK~~R~ivg~sl 89 (158)
T 4a17_T 14 RIYPGRGQRFI-AKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWKKVKATDIA---QKKKKRNVTVARAIVGISL 89 (158)
T ss_dssp EECTTCCEEEE-CTTSCEEEESCHHHHHHHHHTCCGGGSTTSHHHHHHHC------------------------------
T ss_pred cccCCCCeEEE-eeCCceEEEEcHHHHHHHHcccCcccchhHHHHHHHhCCcchHHHH---HHHhcCCcccchhhhhhhH
Confidence 33333344554 3678889999999999999999999999999999999999999887 6788889999999999999
Q ss_pred hhhhhh
Q psy4929 249 EAIKKV 254 (633)
Q Consensus 249 ~~~~~~ 254 (633)
++|..-
T Consensus 90 ~~I~~k 95 (158)
T 4a17_T 90 EEINRR 95 (158)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 999877
No 29
>2zkr_u 60S ribosomal protein L24; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=98.86 E-value=2.3e-10 Score=106.00 Aligned_cols=82 Identities=27% Similarity=0.463 Sum_probs=37.9
Q ss_pred cceeecCCcEEEEeeeeeeeeccccccccccccccCCccccchhhhhhhhccCCccCcchhhhhccC-CCccchhhhhhh
Q psy4929 168 EPVEVMPNISYTACATLKIFRFCRSKCHKLFKRKKNPRKTAWTKAYRKVRGKDLAVDPSFEFAKRRN-VPLKYDREFWNK 246 (633)
Q Consensus 168 ~p~~~~~~~~y~~~a~~~~~~f~~~~c~k~~~~~~~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~ 246 (633)
.|++-.-|.-|+- -+.+.|.|++++||++|+.+++|+++.||..||+.+++.+.. |++++|+ +|.+|+|++++.
T Consensus 11 ~~IyPG~G~~~Vr-~Dgkvf~FcssKC~k~f~~krnPRKl~WT~~yRr~~kK~~~~----e~~KkR~r~~vK~~R~ivg~ 85 (157)
T 2zkr_u 11 YKIYPGHGRRYAR-TDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSE----EIQKKRTRRAVKFQRAITGA 85 (157)
T ss_dssp CBCCTTCCEEEEC-TTSCEEEESSHHHHHHHHTTCCTTTCTTCSTTC---------------------------------
T ss_pred CcccCCCceEEEe-eCCcEEEEecHHHHHHHHccCCcccchhHHHHHHHhcchHHH----HHHHHHhcCccceeHHHHHh
Confidence 3444444555643 678889999999999999999999999999999999998854 8899998 899999999999
Q ss_pred hhhhhhhh
Q psy4929 247 TVEAIKKV 254 (633)
Q Consensus 247 ~~~~~~~~ 254 (633)
++++|..-
T Consensus 86 sl~~I~~k 93 (157)
T 2zkr_u 86 SLADIMAK 93 (157)
T ss_dssp --------
T ss_pred hHHHHHHH
Confidence 99999877
No 30
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.04 E-value=1.3e-06 Score=82.38 Aligned_cols=60 Identities=15% Similarity=0.257 Sum_probs=49.9
Q ss_pred EEEEeCCCccceEEEeEEeEeeccChhhhhhhcC-CCC--CCCCeEEcCCCCHhhhhhhheecccCc
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNG-TLA--TRSDEIELPDVEPAAFLALLRCSMTGK 83 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~-~~~--~~~~~I~l~dv~~~~f~~lL~ylYTG~ 83 (633)
|+++..+| +.|++||.| |+.|+||++||.+ ++. +....|.|++|++.+++.+++|+|++.
T Consensus 3 v~L~ssDg---~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~ 65 (159)
T 2ast_A 3 IKLQSSDG---EIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 65 (159)
T ss_dssp EEEECTTS---CEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEEcCCC---CEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcC
Confidence 67776554 899999999 9999999999997 543 345789999999999999999999987
No 31
>1vq8_U 50S ribosomal protein L24E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.39.1.6 PDB: 1giy_R 1jj2_T 1k73_V* 1k8a_V* 1k9m_V* 1kc8_V* 1kd1_V* 1kqs_T* 1m1k_V* 1m90_V* 1ml5_r* 1n8r_V* 1nji_V* 1q7y_V* 1q81_V* 1q82_V* 1q86_V* 1qvf_T 1qvg_T 1s72_U* ...
Probab=98.00 E-value=8.8e-07 Score=70.65 Aligned_cols=53 Identities=21% Similarity=0.340 Sum_probs=37.7
Q ss_pred cceeecCCcEEEEeeeeeeeeccccccccccccccCCccccchhhhhhhhccCC
Q psy4929 168 EPVEVMPNISYTACATLKIFRFCRSKCHKLFKRKKNPRKTAWTKAYRKVRGKDL 221 (633)
Q Consensus 168 ~p~~~~~~~~y~~~a~~~~~~f~~~~c~k~~~~~~~~~~~~~~~~~r~l~~~~~ 221 (633)
.|++---|.-|+- .+.+.|.|++++|+++|+.+++|+++.||+.||+.++|.+
T Consensus 11 ~~IyPG~G~~~Vr-~Dgkvf~FcssKc~k~f~~krnPRkl~WT~~yRr~~kK~~ 63 (66)
T 1vq8_U 11 TDIEPGTGTMFVH-KDGATTHFCSSKCENNADLGREARNLEWTDTARGEAGEAE 63 (66)
T ss_dssp CBCCSSCCEEEEC-TTSCEEEESCHHHHHHHHTTCCGGGCTTSTTTC-------
T ss_pred CcccCCCceEEEe-eCCcEEEEECHHHHHHHHcccCcccchhHHHHHHHhcccc
Confidence 3444344555543 6788899999999999999999999999999999999976
No 32
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=97.98 E-value=2.6e-06 Score=73.65 Aligned_cols=57 Identities=14% Similarity=0.240 Sum_probs=46.6
Q ss_pred EEEEeCCCccceEEEeEEeEeeccChhhhhhhcC--CC-CCCCCeEEcCCCCHhhhhhhheecc
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNG--TL-ATRSDEIELPDVEPAAFLALLRCSM 80 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~--~~-~~~~~~I~l~dv~~~~f~~lL~ylY 80 (633)
|+++..+| +.|++||.| |+.|+||++||.+ ++ ++....|.|++|++.+++.+++|+|
T Consensus 4 v~L~SsDg---~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~ 63 (97)
T 4ajy_C 4 VKLISSDG---HEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 63 (97)
T ss_dssp EEEECTTC---CEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEecCC---cEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHH
Confidence 56766554 899999999 9999999999987 44 3457899999999999999999999
No 33
>3j21_V 50S ribosomal protein L24E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=97.57 E-value=1.6e-05 Score=63.39 Aligned_cols=50 Identities=34% Similarity=0.667 Sum_probs=40.3
Q ss_pred ceeecCCcEEEEeeeeeeeeccccccccccccccCCccccchhhhhhhhcc
Q psy4929 169 PVEVMPNISYTACATLKIFRFCRSKCHKLFKRKKNPRKTAWTKAYRKVRGK 219 (633)
Q Consensus 169 p~~~~~~~~y~~~a~~~~~~f~~~~c~k~~~~~~~~~~~~~~~~~r~l~~~ 219 (633)
|++---|.-|+- .+.+.|.|++++|+++|+.+++|+++.||+.||+...+
T Consensus 13 ~IyPG~G~~~Vr-~Dgkvf~FcssKC~k~f~~krnPRkl~WT~~yRk~~~~ 62 (66)
T 3j21_V 13 PFEPGTGKMYVR-NDGRVLFFCSRKCERYYFMGRNPRKLKWTKAYQEARLQ 62 (66)
T ss_dssp BCCTTCCEEEEC-SSSCEEEESSHHHHHHHHTTCCTTTCSSSHHHHHHHHH
T ss_pred cccCCCCeEEEe-cCCcEEEEECHHHHHHHHcCCCcccchHHHHHHHHhhh
Confidence 333333455543 67889999999999999999999999999999987654
No 34
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=96.99 E-value=0.00025 Score=65.44 Aligned_cols=57 Identities=16% Similarity=0.245 Sum_probs=49.6
Q ss_pred EEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccCc
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTGK 83 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG~ 83 (633)
|+++..+| +.|.+|+.+ |..|++|++||.+. + ...|.|++|++.+++.+++|+|...
T Consensus 4 v~L~SsDg---~~f~v~~~v-A~~S~~ik~ml~~~--~-~~~Ipl~~V~~~iL~kVieyc~~h~ 60 (141)
T 1fs1_B 4 IKLQSSDG---EIFEVDVEI-AKQSVTIKTMLEDL--G-MDPVPLPNVNAAILKKVIQWCTHHK 60 (141)
T ss_dssp EEEECTTS---CEEEEEGGG-GGTCHHHHHHHHHT--C-CSSEECTTCCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCC---CEEEecHHH-HHHhHHHHHHHHhc--C-CCceecCCcCHHHHHHHHHHHHHhc
Confidence 67777665 899999998 89999999999863 1 5689999999999999999999865
No 35
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=96.96 E-value=0.00019 Score=65.34 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=66.8
Q ss_pred hhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhh
Q psy4929 211 KAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQR 287 (633)
Q Consensus 211 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (633)
..+++++.++..||+++.+..++. +.||.++... ++++..-.. ..
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~f---~aHk~vLaa~S~yF~~mf~~~~-----------------------------~~ 61 (135)
T 2yy9_A 14 QELNKQREKGQYCDATLDVGGLVF---KAHWSVLACCSHFFQRIYGDGT-----------------------------GG 61 (135)
T ss_dssp HHHHHHHHTTTTCCEEEEETTEEE---EECHHHHHHHCHHHHHTCC---------------------------------C
T ss_pred HHHHHHHhcCCCcceEEEECCEEE---ehHHHHHHHhCHHHHHHHcCCC-----------------------------CC
Confidence 788999999999999999987766 5888877765 444433210 01
Q ss_pred eeeeecCcchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcCc
Q psy4929 288 DIAILNDPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNTP 357 (633)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l~ 357 (633)
.|.+ + .........++++ +.++.+..+|+.+ +|.+|++|+++.|.+.|.++|.+.+.
T Consensus 62 ~i~l---~------~~~~~~f~~lL~fiYtg~~~i~~~~v~~----ll~~A~~l~i~~L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 62 SVVL---P------AGFAEIFGLLLDFFYTGHLALTSGNRDQ----VLLAAKELRVPEAVELCQSFQPQTSV 120 (135)
T ss_dssp CEEE---C------GGGHHHHHHHHHHHHHSCCCCCTTTHHH----HHHHHHHTTCHHHHHHHHHCCC----
T ss_pred eEEe---C------CCCHHHHHHHHHHHhCCCCCCCHHHHHH----HHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 1111 0 0111222335555 4467777777776 99999999999999999999999883
No 36
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=96.78 E-value=0.00044 Score=61.85 Aligned_cols=102 Identities=13% Similarity=0.212 Sum_probs=67.2
Q ss_pred hhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhh
Q psy4929 211 KAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQR 287 (633)
Q Consensus 211 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (633)
..+++++.+...||+++.+..+.. +.||.+++.. ++++..-+ ..+ -..
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~---~aHk~iLaa~S~~F~~~f~~~-----------------~~e---------~~~ 68 (127)
T 1r29_A 18 LNLNRLRSRDILTDVVIVVSREQF---RAHKTVLMACSGLFYSIFTDQ-----------------LKR---------NLS 68 (127)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEE---EECHHHHHHHCHHHHHHHTST-----------------TTT---------TCS
T ss_pred HHHHHHHhcCCCCCEEEEECCEEE---ehHHHHHHHhCHHHHHHhcCC-----------------ccC---------CCC
Confidence 788899999999999999987765 5888777655 33333221 000 011
Q ss_pred eeee-e-cCcchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhc
Q psy4929 288 DIAI-L-NDPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKN 355 (633)
Q Consensus 288 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~ 355 (633)
.|.+ - .+|.. ...++++ +..+.+..+++.+ ++.+|++|+++.|.+.|.++|.++
T Consensus 69 ~i~l~~~~~~~~----------f~~ll~~~Ytg~~~~~~~~~~~----ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 69 VINLDPEINPEG----------FNILLDFMYTSRLNLREGNIMA----VMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp EEECCTTSCHHH----------HHHHHHHHHHSCCCCCTTTHHH----HHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred EEEeCCCCCHHH----------HHHHHHHHcCCCcCcCHHHHHH----HHHHHHHhCCHHHHHHHHHHHHhc
Confidence 1111 0 12222 2234554 4466777777777 999999999999999999998764
No 37
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=96.77 E-value=0.00086 Score=58.05 Aligned_cols=61 Identities=15% Similarity=0.159 Sum_probs=52.5
Q ss_pred cEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccCc
Q psy4929 19 DVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTGK 83 (633)
Q Consensus 19 DV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG~ 83 (633)
-|+++..+| +.|.+++.+ |..|.++++|+.+++++....|.|++|+..+++.+++|+|...
T Consensus 5 ~v~L~SsDg---~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~~~iL~kVieyc~~h~ 65 (99)
T 1hv2_A 5 FVTLVSKDD---KEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNYNL 65 (99)
T ss_dssp EEEEEETTT---EEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCC---CEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcCHHHHHHHHHHHHHhc
Confidence 367777554 899999997 8999999999998665555789999999999999999998755
No 38
>3jyw_S 60S ribosomal protein L24(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=96.77 E-value=0.00024 Score=52.38 Aligned_cols=35 Identities=49% Similarity=0.824 Sum_probs=29.6
Q ss_pred CcEEEEeeeeeeeeccccccccccccccCCccccch
Q psy4929 175 NISYTACATLKIFRFCRSKCHKLFKRKKNPRKTAWT 210 (633)
Q Consensus 175 ~~~y~~~a~~~~~~f~~~~c~k~~~~~~~~~~~~~~ 210 (633)
|.-|+ ..+.+.|.|++++|+|+|+.+++|+++.||
T Consensus 11 G~~~V-r~Dgkvf~FcssKc~k~~~~krnPrkl~WT 45 (45)
T 3jyw_S 11 GTLFV-RGDSKIFRFQNSKSASLFKQRKNPRRIAWT 45 (45)
T ss_dssp CCEEC-TTTSCCCCCCSHHHHGGGTSCCCTTTCCCC
T ss_pred CeEEE-ecCCCEEEEECHHHHHHHHcCCCCccCccC
Confidence 34443 356788999999999999999999999997
No 39
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=96.74 E-value=0.00067 Score=60.15 Aligned_cols=98 Identities=10% Similarity=0.122 Sum_probs=65.0
Q ss_pred hhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhh
Q psy4929 211 KAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQR 287 (633)
Q Consensus 211 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (633)
..+++++.+...||+++.+..+.. +.||.++... ++++..-. ..++ . + .
T Consensus 16 ~~l~~l~~~~~~~Dv~l~v~~~~~---~aHk~vLaa~S~yF~~~f~~~------~~~i-----------------~-l-~ 67 (119)
T 2q81_A 16 EQLNQQRQLGLLCDCTFVVDGVHF---KAHKAVLAACSEYFKMLFVDQ------KDVV-----------------H-L-D 67 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEE---EECHHHHHHHCHHHHHHHHHC------CSGG-----------------G-G-G
T ss_pred HHHHHHHhcCCCcceEEEECCEEE---ehhHHHHHHcCHHHHHHHcCC------CCEE-----------------E-e-C
Confidence 778899999999999999887765 5888777665 34333210 0000 0 0 0
Q ss_pred eeeeecCcchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhhh
Q psy4929 288 DIAILNDPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDK 354 (633)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~ 354 (633)
+ .++ .....++++ +.++.+..+|+.+ ++.+|++|+++.+.+.|.++|..
T Consensus 68 ~----~~~----------~~f~~ll~~~Ytg~~~i~~~~~~~----ll~~A~~l~i~~L~~~C~~~l~l 118 (119)
T 2q81_A 68 I----SNA----------AGLGQVLEFMYTAKLSLSPENVDD----VLAVATFLQMQDIITACHALKSL 118 (119)
T ss_dssp G----CCH----------HHHHHHHHHHHHSCCCCCTTTHHH----HHHHHHHTTCHHHHHHHHHHHTC
T ss_pred C----CCH----------HHHHHHHHHHcCCCCccCHHHHHH----HHHHHHHhCCHHHHHHHHHHHhc
Confidence 0 011 112224444 4466777777766 99999999999999999998863
No 40
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=96.70 E-value=0.00017 Score=68.03 Aligned_cols=58 Identities=10% Similarity=0.169 Sum_probs=28.3
Q ss_pred EEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCCCCCCeEEcCCCCHhhhhhhheecccCc
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLATRSDEIELPDVEPAAFLALLRCSMTGK 83 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~~~~~~I~l~dv~~~~f~~lL~ylYTG~ 83 (633)
|+++..+| +.|.+|+.+ |..|++|++||.+.. ....|.|++|++.+++.+++|+|+..
T Consensus 6 v~L~SsDg---~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~~~iL~kVieyc~~h~ 63 (160)
T 2p1m_A 6 IVLKSSDG---ESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVTSKILAKVIEYCKRHV 63 (160)
T ss_dssp --CCC------------CHH-HHTCTTTC--------------CCTTSCHHHHHHHHHC-----
T ss_pred EEEEcCCC---CEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCcHHHHHHHHHHHHHcc
Confidence 66665443 899999998 899999999998743 34589999999999999999999976
No 41
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=96.68 E-value=0.00026 Score=64.59 Aligned_cols=110 Identities=7% Similarity=0.091 Sum_probs=71.9
Q ss_pred CCccccchhhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhh
Q psy4929 203 NPRKTAWTKAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETA 279 (633)
Q Consensus 203 ~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (633)
++..+. ..+++++.+...||+++.+..++. +.||.+++.. ++++..-+. .+
T Consensus 19 ~~~~l~--~~l~~l~~~~~~~Dv~l~v~~~~f---~aHk~vLaa~S~yF~~~f~~~~-----------------~e---- 72 (138)
T 2z8h_A 19 HSTNVL--LSLNDQRKKDVLCDVTVLVEGQRF---RAHRSVLAACSSYFHSRIVGQT-----------------DA---- 72 (138)
T ss_dssp HHHHHH--HHHHHHHHHTCSCCEEEEETTEEE---EECHHHHHHHCHHHHHHHTTCC-----------------CT----
T ss_pred hHHHHH--HHHHHHHhhCCCcCeEEEECCEEE---echHHHHHHcCHHHHHHHhcCC-----------------CC----
Confidence 344444 788999999999999999987766 5888777665 444333210 00
Q ss_pred hhhhhhhheeeeecCcchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcC
Q psy4929 280 RDIKAVQRDIAILNDPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNT 356 (633)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l 356 (633)
...+.+-. ....+....++++ +.++.+..+|+.+ +|.+|++|+++.|.+.|.++|.+.+
T Consensus 73 ------~~~i~l~~--------~v~~~~~~~lL~~~Ytg~~~i~~~~v~~----ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 73 ------ELTVTLPE--------EVTVKGFEPLIQFAYTAKLILSKDNVDE----VCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp ------TEEEECCT--------TSCHHHHHHHHHHHHHSCCCCCTTTHHH----HHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred ------CceEEeCC--------CCCHHHHHHHHHHhcCCCcccCHHHHHH----HHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 00111100 0001111224444 4467777777777 9999999999999999999999988
No 42
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=96.67 E-value=0.00047 Score=61.16 Aligned_cols=100 Identities=13% Similarity=0.113 Sum_probs=64.8
Q ss_pred hhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhh
Q psy4929 211 KAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQR 287 (633)
Q Consensus 211 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (633)
..+++++.++..||+++.+..++. +.||.+++.. ++++..-+. ..
T Consensus 13 ~~l~~l~~~~~~~Dv~l~v~~~~f---~aHk~vLaa~S~yF~~~f~~~~-----------------------------~~ 60 (119)
T 3b84_A 13 QELNKQREKGQYCDATLDVGGLVF---KAHWSVLACCSHFFQSLYGDGS-----------------------------GG 60 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEE---EECHHHHHHHCHHHHHHHTTTT-----------------------------CC
T ss_pred HHHHHHHhcCCCcceEEEECCEEE---EeeHHHHhhcCHHHHHHHCCCC-----------------------------CC
Confidence 678899999999999999887765 5888777665 333332210 11
Q ss_pred eeeeecCcchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhc
Q psy4929 288 DIAILNDPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKN 355 (633)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~ 355 (633)
.|.+ . .........++++ +.++.+..+|+.+ ++.+|++|+++.+.+.|.++|.+.
T Consensus 61 ~i~l-~--------~~~~~~f~~ll~~iYtg~~~~~~~~v~~----ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 61 SVVL-P--------AGFAEIFGLLLDFFYTGHLALTSGNRDQ----VLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CEEE-C--------GGGHHHHHHHHHHHHHSCCCCCTTTHHH----HHHHHHHTTCHHHHHHHHHCC---
T ss_pred eEEe-C--------CCCHHHHHHHHHHHcCCCCccCHHHHHH----HHHHHHHhCcHHHHHHHHHHHHHc
Confidence 1111 1 0111222234555 4466777777766 999999999999999999998764
No 43
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=96.67 E-value=0.00048 Score=61.24 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=68.5
Q ss_pred CccccchhhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhh
Q psy4929 204 PRKTAWTKAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETAR 280 (633)
Q Consensus 204 ~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (633)
|..+. ..+++++.+...||+++.+..++. +.||.+++.. ++++..-+
T Consensus 12 ~~~l~--~~l~~l~~~~~~~Dv~l~v~~~~f---~aHk~vLaa~S~yF~~~f~~~------------------------- 61 (121)
T 1buo_A 12 PTGLL--CKANQMRLAGTLCDVVIMVDSQEF---HAHRTVLACTSKMFEILFHRN------------------------- 61 (121)
T ss_dssp HHHHH--HHHHHHHHHTTTCCEEEEESSCEE---EECHHHHHHHCHHHHHHTTSC-------------------------
T ss_pred HHHHH--HHHHHHHhcCCCCCEEEEECCEEE---ehhHHHHhhcCHHHHHHHcCC-------------------------
Confidence 33444 788999999999999999887665 5888777655 33333210
Q ss_pred hhhhhhheeeeec-Ccchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhc
Q psy4929 281 DIKAVQRDIAILN-DPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKN 355 (633)
Q Consensus 281 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~ 355 (633)
...|.+-. +|.. ...++++ +.++.+..+|+.+ ++.+|++|+++.+.+.|.++|.+.
T Consensus 62 -----~~~i~l~~~~~~~----------f~~ll~~~Ytg~~~~~~~~~~~----ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 62 -----SQHYTLDFLSPKT----------FQQILEYAYTATLQAKAEDLDD----LLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp -----CSEEEECSSCHHH----------HHHHHHHHHHSCCCCCGGGHHH----HHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -----CcEEEeCCCCHHH----------HHHHHHhhcCCCcCCCHHHHHH----HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 01111111 2222 2224454 4466677777766 999999999999999999998764
No 44
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=96.60 E-value=0.00094 Score=59.02 Aligned_cols=100 Identities=15% Similarity=0.252 Sum_probs=64.3
Q ss_pred hhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhh
Q psy4929 211 KAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQR 287 (633)
Q Consensus 211 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (633)
..+++++.+...||+++.+..+.. +.||.+++.. ++++..-+ . .+ -..
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~~---~aHk~vLaa~S~~F~~~f~~~-~----------------~e---------~~~ 64 (120)
T 2if5_A 14 SGLNEQRTQGLLCDVVILVEGREF---PTHRSVLAACSQYFKKLFTSG-A----------------VV---------DQQ 64 (120)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEE---EECHHHHHHHCHHHHHHHHC-------------------------------CC
T ss_pred HHHHHHHhcCCCCCeEEEECCEEE---eHHHHHHHHhCHHHHHHhcCC-c----------------cc---------cCC
Confidence 678889999999999999987665 5888777655 33333210 0 00 000
Q ss_pred eeeeec--Ccchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhh
Q psy4929 288 DIAILN--DPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTID 353 (633)
Q Consensus 288 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~ 353 (633)
....+. +|. ....++++ +..+.+..+++.+ ++.+|++|+++.+.+.|.++|+
T Consensus 65 ~~i~l~~~~~~----------~f~~ll~~~Yt~~~~~~~~~~~~----ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 65 NVYEIDFVSAE----------ALTALMDFAYTATLTVSTANVGD----ILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp SEEECCSSCHH----------HHHHHHHHHHHSCCCCCGGGHHH----HHHHHHHTTCHHHHHHHHHHHC
T ss_pred ceEEeCCCCHH----------HHHHHHHHHcCCCCccCHHHHHH----HHHHHHHhCCHHHHHHHHHHhC
Confidence 111111 222 22224454 4466677777776 9999999999999999999874
No 45
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=96.54 E-value=0.00059 Score=62.81 Aligned_cols=108 Identities=10% Similarity=0.170 Sum_probs=65.8
Q ss_pred CCccccchhhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhh
Q psy4929 203 NPRKTAWTKAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETA 279 (633)
Q Consensus 203 ~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (633)
++..+. ..+++++.+...||+++.+..++. +.||.+++.. ++++..-.- .+.+
T Consensus 30 h~~~l~--~~l~~l~~~~~~~Dv~l~v~~~~f---~aHk~vLaa~S~yF~~mf~~~~-----------------~e~e-- 85 (144)
T 2ppi_A 30 HAARLL--RALSSFREESRFCDAHLVLDGEEI---PVQKNILAAASPYIRTKLNYNP-----------------PKDD-- 85 (144)
T ss_dssp HHHHHH--HHHHHTTC--CCCCEEEEETTEEE---EECHHHHHHHCHHHHHHHHHCC-----------------------
T ss_pred hHHHHH--HHHHHHHhcCCCcceEEEECCEEE---ehHHHHHHHcCHHHHHHHcCCC-----------------cccc--
Confidence 334444 788999999999999999987765 5888777765 444433210 0000
Q ss_pred hhhhhhhheeeeec-Ccchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhh
Q psy4929 280 RDIKAVQRDIAILN-DPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTI 352 (633)
Q Consensus 280 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L 352 (633)
.-...|.+-. ++.. ...++++ +..+.++.+|+.+ +|.+|++|+++.|.+.|.++|
T Consensus 86 ----~~~~~I~l~~v~~~~----------f~~lL~fiYtg~~~i~~~~v~~----ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 86 ----GSTYKIELEGISVMV----------MREILDYIFSGQIRLNEDTIQD----VVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp -----CCCEEECCSSCHHH----------HHHHHHHHTTSCCCCCTTTHHH----HHHHHHHTTCHHHHHHHHTTC
T ss_pred ----CCCcEEEeCCCCHHH----------HHHHHHHHhCCCCCCCHHHHHH----HHHHHHHhCcHHHHHHHHHHh
Confidence 0001111111 2222 2224444 4466677777776 999999999999999999886
No 46
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=96.43 E-value=0.0013 Score=57.89 Aligned_cols=100 Identities=13% Similarity=0.159 Sum_probs=64.9
Q ss_pred hhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhh
Q psy4929 211 KAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQR 287 (633)
Q Consensus 211 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (633)
..+++++.+...||+++.+..++. +.||.+++.. ++++..-+ . ..
T Consensus 11 ~~l~~l~~~~~~~Dv~l~v~~~~~---~aHk~vLaa~S~yF~~~f~~~---~--------------------------~~ 58 (116)
T 2vpk_A 11 ERLNKQREAGFLCDCTIVIGEFQF---KAHRNVLASFSEYFGAIYRST---S--------------------------EN 58 (116)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEE---EECHHHHHHHCHHHHHHHTTC---C--------------------------CS
T ss_pred HHHHHHHhcCCCCcEEEEECCEEE---eccHHHHhhcCHHHHHHHcCC---C--------------------------CC
Confidence 678889999999999999887765 5888777655 33333321 0 01
Q ss_pred eeeeecCcchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhh
Q psy4929 288 DIAILNDPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTID 353 (633)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~ 353 (633)
.|. |.-| .........++++ +.++.+..+|+.+ ++.+|++|+++.|.+.|.++|.
T Consensus 59 ~i~-l~~~------~~~~~~f~~ll~~~Yt~~~~~~~~~v~~----ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 59 NVF-LDQS------QVKADGFQKLLEFIYTGTLNLDSWNVKE----IHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CEE-CCTT------TCCHHHHHHHHHHHHHSCCCCCTTTHHH----HHHHHHHTTCHHHHHHHHHHHC
T ss_pred eEE-eecC------CCCHHHHHHHHHHHcCCCcccCHHHHHH----HHHHHHHhCCHHHHHHHHHHHh
Confidence 111 1100 0111122234444 4466677777776 9999999999999999999885
No 47
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=96.38 E-value=0.0013 Score=56.96 Aligned_cols=42 Identities=19% Similarity=0.417 Sum_probs=33.9
Q ss_pred ceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcC
Q psy4929 311 IVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNT 356 (633)
Q Consensus 311 ~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l 356 (633)
++++ +..+.+..+|+.+ ++.+|++|+++.|.+.|.++|.+++
T Consensus 66 ~l~~iYt~~~~~~~~~~~~----ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 66 LLKYMYSDEIDLEADTVLA----TLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp HHHHHHHCCCCCCTTTHHH----HHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCccCCHHHHHH----HHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 4555 4466677777766 9999999999999999999998754
No 48
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=96.09 E-value=0.00078 Score=60.52 Aligned_cols=100 Identities=12% Similarity=0.060 Sum_probs=60.4
Q ss_pred hhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhh
Q psy4929 211 KAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQR 287 (633)
Q Consensus 211 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (633)
..+++++.+...||+++.+..+.. +.||.++... ++++..-+ -..
T Consensus 22 ~~l~~l~~~~~~~Dv~l~v~~~~~---~~Hk~vLaa~S~~F~~~f~~~-----------------------------~~~ 69 (129)
T 3ga1_A 22 ECLNEQRLQGLYCDVSVVVKGHAF---KAHRAVLAASSSYFRDLFNNS-----------------------------RSA 69 (129)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEE---EECHHHHHHHBHHHHHHHHHC-----------------------------CCS
T ss_pred HHHHHHHhcCCCcceEEEECCEEE---EehHHHHHHcCHHHHHHHcCC-----------------------------CCC
Confidence 678889999999999999987665 5788776655 33333221 011
Q ss_pred eeeee--cCcchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcC
Q psy4929 288 DIAIL--NDPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNT 356 (633)
Q Consensus 288 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l 356 (633)
.|.+- .+|.. ...++++ +.++.+..+|+.+ +|.+|++|+++.+.+.|.++|.+..
T Consensus 70 ~i~l~~~~~~~~----------f~~ll~~iYtg~~~i~~~~~~~----ll~~A~~~~i~~l~~~C~~~L~~~~ 128 (129)
T 3ga1_A 70 VVELPAAVQPQS----------FQQILSFCYTGRLSMNVGDQDL----LMYTAGFLQIQEIMEKGTEFFLKVS 128 (129)
T ss_dssp EEECCTTCCHHH----------HHHHHHHHHHSEEECCTTTHHH----HHHHHHHTTBTTSSCC---------
T ss_pred EEEECCCCCHHH----------HHHHHHHHhCCccccCHHHHHH----HHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 11111 12222 2224454 4577888888777 9999999999999999999998764
No 49
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=96.08 E-value=0.0023 Score=56.11 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=65.7
Q ss_pred EEEEeCCCccceEEEeEEeEeeccC-hhhhhhhcCCCC-----CCCCeEEcCCCCHhhhhhhheecccCcchhh-----h
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGS-VVFDAMFNGTLA-----TRSDEIELPDVEPAAFLALLRCSMTGKEQVV-----H 88 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S-~yF~amf~~~~~-----~~~~~I~l~dv~~~~f~~lL~ylYTG~~~~~-----~ 88 (633)
|++-||| +.|...+..|+... .+|.+||.+... ....++-+ |-+|..|+.+|+|+.+|++... .
T Consensus 8 v~LNVGG----~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~ 82 (107)
T 3drz_A 8 VRLNVGG----TYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEE 82 (107)
T ss_dssp EEEEETT----EEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHH
T ss_pred EEEEECC----EEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHH
Confidence 7888999 99999999998775 578999986531 23445655 8899999999999999987652 3
Q ss_pred hhhhhccccccCCchhhhhhh
Q psy4929 89 RFQHIESRWGYSGTSDRIRFS 109 (633)
Q Consensus 89 rfq~la~~w~y~gl~d~i~f~ 109 (633)
.+..-+..|++.++.+.|+-.
T Consensus 83 ~l~~Ea~fy~l~~L~~~l~~~ 103 (107)
T 3drz_A 83 GVLEEAEFYNITSLIKLVKDK 103 (107)
T ss_dssp HHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHH
Confidence 456666788888887777643
No 50
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=96.02 E-value=0.0031 Score=54.18 Aligned_cols=60 Identities=13% Similarity=0.176 Sum_probs=47.4
Q ss_pred EEEEeCCCccceEEEeEEeEeeccChhhhhhhcC-CC--CCCCCeEEcCCCCHhhhhhhheecccCc
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNG-TL--ATRSDEIELPDVEPAAFLALLRCSMTGK 83 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~-~~--~~~~~~I~l~dv~~~~f~~lL~ylYTG~ 83 (633)
|+++..+| +.|.+++.+ |..|.++++|+.+ +. ++....|.||+|+..+++.+++|+|...
T Consensus 3 v~L~SsDg---~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~ 65 (96)
T 2fnj_C 3 VKLISSDG---HEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKV 65 (96)
T ss_dssp EEEECTTS---CEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHH
T ss_pred EEEEecCC---CEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHcc
Confidence 56666554 899999997 8999999999986 22 3345789999999999999999998754
No 51
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=95.99 E-value=0.0021 Score=57.21 Aligned_cols=91 Identities=10% Similarity=0.049 Sum_probs=58.0
Q ss_pred hccCCccCcchhhhhccCCCccchhhhhhhhhhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhheeeeecCcc
Q psy4929 217 RGKDLAVDPSFEFAKRRNVPLKYDREFWNKTVEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQRDIAILNDPT 296 (633)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (633)
|.++..||+++.+..++. +.||.+++....-+..- ...| .+.
T Consensus 25 r~~~~~~Dv~l~v~~~~f---~aHk~vLaa~S~yF~~~-------------------------------~~~i-~l~--- 66 (119)
T 3m5b_A 25 RLRPALCDTLITVGSQEF---PAHSLVLAGVSQQLGRR-------------------------------GQWA-LGE--- 66 (119)
T ss_dssp HHTTTTCCEEEEETTEEE---EECHHHHHTTCGGGCCC-------------------------------EEEE-CCS---
T ss_pred HhcCCCcceEEEECCEEE---eeEHHHHHHcCHHHhcC-------------------------------CCEE-EeC---
Confidence 345678999999987776 58887777654332210 0001 111
Q ss_pred hhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhhh
Q psy4929 297 EVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDK 354 (633)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~ 354 (633)
.........++++ +.++.++.+|+.+ +|.+|++|+++.+.+.|++.+..
T Consensus 67 -----~v~~~~f~~ll~fiYtg~~~i~~~~v~~----ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 67 -----GISPSTFAQLLNFVYGESVELQPGELRP----LQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp -----SCCHHHHHHHHHHHTTCCEEECGGGHHH----HHHHHHHTTCHHHHHHHHHHC--
T ss_pred -----CCCHHHHHHHHHHHcCCCcCcCHHHHHH----HHHHHHHhCCHHHHHHHHHHHhh
Confidence 0111222235555 4477888888877 99999999999999999988765
No 52
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=95.95 E-value=0.00033 Score=62.65 Aligned_cols=106 Identities=9% Similarity=0.138 Sum_probs=67.5
Q ss_pred CccccchhhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhh
Q psy4929 204 PRKTAWTKAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETAR 280 (633)
Q Consensus 204 ~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (633)
+..+. ..+++++.++..||+++.+..++. +.||.+++.. ++++..-+. .+
T Consensus 13 ~~~l~--~~l~~l~~~~~~~Dv~l~v~~~~~---~aHk~vLaa~S~yF~~mf~~~~-----------------~e----- 65 (124)
T 2ihc_A 13 STNVL--LSLNDQRKKDVLCDVTIFVEGQRF---RAHRSVLAACSSYFHSRIVGQA-----------------DG----- 65 (124)
T ss_dssp HHHHH--HHHHHHHHHTCSCCEEEEETTEEE---EECHHHHHHHBHHHHHHHTTC-------------------------
T ss_pred HHHHH--HHHHHHHhcCCCcCEEEEECCEEE---ecHHHHHHHcCHHHHHHHcCCC-----------------CC-----
Confidence 34444 788999999999999999987766 5888777655 333333210 00
Q ss_pred hhhhhhheeeeecCcchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhhh
Q psy4929 281 DIKAVQRDIAILNDPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTID 353 (633)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~ 353 (633)
...+.+ |. ....+....++++ +.++.+..+|+.+ +|.+|++|+++.+.+.|.++|.
T Consensus 66 -----~~~i~l---~~-----~v~~~~f~~lL~~iYtg~~~i~~~~v~~----ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 66 -----ELNITL---PE-----EVTVKGFEPLIQFAYTAKLILSKENVDE----VCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp -----CEEEEC---CT-----TSCHHHHHHHHHHHHHSEEEEETTTHHH----HHHHHHHHTBSSCCGGGGGTC-
T ss_pred -----CceEee---cC-----CcCHHHHHHHHHHhcCCCcccCHHHHHH----HHHHHHHHCCHHHHHHHHHHHh
Confidence 001111 10 0011112224554 4577788888777 9999999999999999998874
No 53
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=95.23 E-value=0.0013 Score=58.57 Aligned_cols=98 Identities=9% Similarity=0.145 Sum_probs=64.8
Q ss_pred hhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhh
Q psy4929 211 KAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQR 287 (633)
Q Consensus 211 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (633)
..+++++.+...||+++.+..+.. +.||.+++.. ++++..-+. .+ ..
T Consensus 21 ~~l~~l~~~~~~~Dv~l~v~~~~f---~aHk~vLaa~S~yF~~~f~~~~-----------------~e----------~~ 70 (125)
T 3ohu_A 21 LGLNDQRKKDILCDVTLIVERKEF---RAHRAVLAACSEYFWQALVGQT-----------------KN----------DL 70 (125)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEE---EECHHHHHHHBHHHHHHHTTCC-----------------CS----------SC
T ss_pred HHHHHHHhcCCccceEEEECCEEE---echHHHHHHcCHHHHHHhcCCC-----------------CC----------Cc
Confidence 778899999999999999887765 5888777765 333333210 00 01
Q ss_pred eeeee--cCcchhhhhhhhhhhhccceee--eceeeecccccCcchHHHHHHhhccCchHHHHHHHHhh
Q psy4929 288 DIAIL--NDPTEVIRAKKKKMVEAGIVEE--IHEMQIRESNLLHGKQILLTTARLFDEPQLAALCLDTI 352 (633)
Q Consensus 288 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L 352 (633)
.|.+- .++.. ...++++ +.++.+..+|+.+ +|.+|++|+++.|.+.|.++|
T Consensus 71 ~i~l~~~~~~~~----------f~~~l~~iYtg~~~~~~~~v~~----ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 71 VVSLPEEVTARG----------FGPLLQFAYTAKLLLSRENIRE----VIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp EEECCTTCCHHH----------HHHHHHHHTTSEEEECTTTHHH----HHHHHHHHTBSSCTTSSCCCC
T ss_pred EEEeCCCCCHHH----------HHHHHHhHcCCceEECHHHHHH----HHHHHHHhCCHHHHHHHHHhC
Confidence 11111 11211 2224444 4577888888877 999999999999999998764
No 54
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=90.66 E-value=0.13 Score=45.34 Aligned_cols=61 Identities=13% Similarity=0.184 Sum_probs=47.1
Q ss_pred cEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCC--C-CCCCCeEEcCCCCHhhhhhhheecccCc
Q psy4929 19 DVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGT--L-ATRSDEIELPDVEPAAFLALLRCSMTGK 83 (633)
Q Consensus 19 DV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~--~-~~~~~~I~l~dv~~~~f~~lL~ylYTG~ 83 (633)
-|+++..+| +.|.+++. .|..|..++.|+... + +.....|.|++|+..+++.+++|++...
T Consensus 18 ~v~L~SsDG---~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~ 81 (112)
T 1vcb_B 18 YVKLISSDG---HEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKV 81 (112)
T ss_dssp EEEEECTTS---CEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCC---CEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhh
Confidence 367776554 89999999 578999999999852 2 2334689999999999999999997543
No 55
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=90.64 E-value=0.045 Score=48.07 Aligned_cols=89 Identities=16% Similarity=0.219 Sum_probs=56.8
Q ss_pred hhhhhhhccCCccCcchhhhhccCCCccchhhhhhhh---hhhhhhhccccccchhhHHHHHhhhhhhhhhhhhhhhhhh
Q psy4929 211 KAYRKVRGKDLAVDPSFEFAKRRNVPLKYDREFWNKT---VEAIKKVEHIKTKRHNLYLAQRLRKAREVETARDIKAVQR 287 (633)
Q Consensus 211 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (633)
..+++++.++..||+++.+..++. +.||.+++.. ++++..-+ ..
T Consensus 20 ~~l~~~~~~~~~~Dv~l~v~~~~f---~aHk~vLaa~S~~F~~~f~~~------------------------------~~ 66 (116)
T 3fkc_A 20 NSLNEQRGHGLFCDVTVIVEDRKF---RAHKNILSASSTYFHQLFSVA------------------------------GQ 66 (116)
T ss_dssp HHHHHHHHHTTTCCEEEEETTEEE---EECHHHHHHHCHHHHHHTTSC------------------------------CS
T ss_pred HHHHHHHhcCCceeEEEEECCEEE---ehhHHHHHHcCHHHHHHHcCC------------------------------CC
Confidence 778899999999999999887665 5788777665 33333221 01
Q ss_pred eeeee-cCcchhhhhhhhhhhhccceee--ecee-eecccccCcchHHHHHHhhccCchHHHH
Q psy4929 288 DIAIL-NDPTEVIRAKKKKMVEAGIVEE--IHEM-QIRESNLLHGKQILLTTARLFDEPQLAA 346 (633)
Q Consensus 288 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~-~l~~~~~~~~~~~lL~~Ad~f~~~~l~~ 346 (633)
.|.+- .+|.. ...++++ +.++ .++.+|+.+ +|.+|++|+++.|.+
T Consensus 67 ~i~l~~~~~~~----------f~~~l~~~Ytg~~~~~~~~~~~~----ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 67 VVELSFIRAEI----------FAEILNYIYSSKIVRVRSDLLDE----LIKSGQLLGVKFIAA 115 (116)
T ss_dssp EEEECSSCHHH----------HHHHHHHHTTSCCCSCCHHHHHH----HHHHHHHHTCHHHHT
T ss_pred EEEeCCCCHHH----------HHHHHHhhcCCCcCCCCHHHHHH----HHHHHHHhCccccCc
Confidence 11111 12222 2224444 3355 567777777 999999999998864
No 56
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=90.39 E-value=0.14 Score=49.79 Aligned_cols=88 Identities=13% Similarity=0.131 Sum_probs=67.2
Q ss_pred EEEEeCCCccceEEEeEEeEeeccC-hhhhhhhcCCCC-----CCCCeEEcCCCCHhhhhhhheecccCcchhh-----h
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGS-VVFDAMFNGTLA-----TRSDEIELPDVEPAAFLALLRCSMTGKEQVV-----H 88 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S-~yF~amf~~~~~-----~~~~~I~l~dv~~~~f~~lL~ylYTG~~~~~-----~ 88 (633)
|+|-||| +.|...+..|.... .+|..||.+... ....++-+ |-+|..|+.+|+|+-+|++.+. .
T Consensus 14 V~LNVGG----~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~ 88 (202)
T 3drx_A 14 VRLNVGG----TYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEE 88 (202)
T ss_dssp EEEEETT----EEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHH
T ss_pred EEEEECC----EEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHH
Confidence 7788999 99999999997654 478899886531 23445555 7899999999999999987652 3
Q ss_pred hhhhhccccccCCchhhhhhhhhh
Q psy4929 89 RFQHIESRWGYSGTSDRIRFSVDR 112 (633)
Q Consensus 89 rfq~la~~w~y~gl~d~i~f~vdk 112 (633)
.|..=+..|++.+|.+.|+-.+..
T Consensus 89 ~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 89 GVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHH
Confidence 466667889999998887765543
No 57
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=90.06 E-value=0.15 Score=48.20 Aligned_cols=60 Identities=12% Similarity=0.255 Sum_probs=47.2
Q ss_pred cEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCC-----CCCCeEEcCCCCHhhhhhhheecccC
Q psy4929 19 DVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLA-----TRSDEIELPDVEPAAFLALLRCSMTG 82 (633)
Q Consensus 19 DV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~-----~~~~~I~l~dv~~~~f~~lL~ylYTG 82 (633)
-|+++..+| +.|.+++.+ |..|.+++.|+...-. .....|.|++|+..+++.+++|++..
T Consensus 8 ~i~L~SsDG---~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h 72 (169)
T 3v7d_A 8 NVVLVSGEG---ERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHH 72 (169)
T ss_dssp EEEEECTTC---CEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHT
T ss_pred eEEEEeCCC---CEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHc
Confidence 577777665 899999998 7899999999975321 22378999999999999999998654
No 58
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=84.34 E-value=0.91 Score=44.95 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=28.1
Q ss_pred hhcHHHHHHHHhhcCChHHHHHHHHHHHhch
Q psy4929 406 QANLTYHCAPARLFDEPQLAALCLDTIDKNT 436 (633)
Q Consensus 406 ~~Nc~~il~~A~~~~~~~L~~~c~~fI~~nf 436 (633)
.+|+..++..|..|+.+.|.+.|.+|+..+.
T Consensus 101 ~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 101 EDTIQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred HhHHHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 3799999999999999999999999998764
No 59
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=80.47 E-value=0.85 Score=40.19 Aligned_cols=78 Identities=21% Similarity=0.255 Sum_probs=56.3
Q ss_pred EEEEeCCCccceEEEeEEeEeeccC-hhhhhhhcCCC--CCCCCeEEcCCCCHhhhhhhheecccCcchh-----hhhhh
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGS-VVFDAMFNGTL--ATRSDEIELPDVEPAAFLALLRCSMTGKEQV-----VHRFQ 91 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S-~yF~amf~~~~--~~~~~~I~l~dv~~~~f~~lL~ylYTG~~~~-----~~rfq 91 (633)
|++-||| +.|...+..|+... ..+.+||++.. .....++-+ |-+|..|+.+|+|+-+|++.. ...|.
T Consensus 7 V~LNVGG----~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~ 81 (115)
T 3kvt_A 7 VIINVGG----IRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFE 81 (115)
T ss_dssp EEEEETT----EEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHH
T ss_pred EEEEECC----EEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHH
Confidence 7888999 89999999997654 35667776532 234556655 789999999999999998754 23455
Q ss_pred hhccccccCCc
Q psy4929 92 HIESRWGYSGT 102 (633)
Q Consensus 92 ~la~~w~y~gl 102 (633)
.=+.-|++...
T Consensus 82 ~Ea~fy~i~~~ 92 (115)
T 3kvt_A 82 EELEFWGLDSN 92 (115)
T ss_dssp HHHHHHTCCGG
T ss_pred HHHHHhCCChH
Confidence 55566777554
No 60
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=78.65 E-value=0.82 Score=42.52 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=24.5
Q ss_pred eeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcC
Q psy4929 318 MQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNT 356 (633)
Q Consensus 318 ~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l 356 (633)
+.+...++.+ |+.||+++++..|.++||+++..++
T Consensus 91 l~vd~~~l~e----Li~AAnyL~I~~Lldl~c~~vA~~i 125 (160)
T 2p1m_A 91 MKIDQATLFE----LILAANYLNIKNLLDLTCQTVADMI 125 (160)
T ss_dssp --------------CHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HcCCHHHHHH----HHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3577788888 9999999999999999999999998
No 61
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=76.95 E-value=0.47 Score=44.09 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=31.3
Q ss_pred eeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcC
Q psy4929 318 MQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNT 356 (633)
Q Consensus 318 ~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l 356 (633)
+.+..+++.+ |+.||+++++..|.++||++|..++
T Consensus 92 ~~id~~~l~e----Ll~AAnyL~I~~Lld~~c~~va~~i 126 (159)
T 2ast_A 92 LKVDQGTLFE----LILAANYLDIKGLLDVTCKTVANMI 126 (159)
T ss_dssp TCSCHHHHHH----HHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHH----HHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4567777777 9999999999999999999999887
No 62
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=71.56 E-value=0.76 Score=41.81 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=31.0
Q ss_pred eeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcC
Q psy4929 318 MQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNT 356 (633)
Q Consensus 318 ~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l 356 (633)
+++..+++.+ |+.||+++++..|.++||+++..++
T Consensus 87 ~~vd~~~l~e----Li~AAnyL~I~~Lldl~c~~vA~~i 121 (141)
T 1fs1_B 87 LKVDQGTLFE----LILAANYLDIKGLLDVTCKTVANMI 121 (141)
T ss_dssp TCSCHHHHHH----HHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHH----HHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3566777777 9999999999999999999999887
No 63
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.52 E-value=2.7 Score=35.94 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=34.4
Q ss_pred eeecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcCchhhh
Q psy4929 318 MQIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNTPDALA 361 (633)
Q Consensus 318 ~~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l~~~~~ 361 (633)
-.|.++|... ++..|+.|++++|.+.|.+|+.++...+..
T Consensus 6 ~~L~~~NCl~----i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~ 45 (105)
T 2eqx_A 6 SGVQVGNCLQ----VMWLADRHSDPELYTAAKHCAKTHLAQLQN 45 (105)
T ss_dssp CCCCTTTHHH----HHHHHHHTTCHHHHHHHHHHHHHTCHHHHT
T ss_pred ccCCHHHHHH----HHHHHHHcCCHHHHHHHHHHHHHHHHHHHh
Confidence 4577788888 999999999999999999999999865544
No 64
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=70.61 E-value=1.5 Score=37.53 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=54.0
Q ss_pred EEEEeCCCccceEEEeEEeEeeccCh-hhhhhhcCC--CCCCCCeEEcCCCCHhhhhhhheeccc-Ccchh-----hhhh
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGSV-VFDAMFNGT--LATRSDEIELPDVEPAAFLALLRCSMT-GKEQV-----VHRF 90 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S~-yF~amf~~~--~~~~~~~I~l~dv~~~~f~~lL~ylYT-G~~~~-----~~rf 90 (633)
|++-||| +.|...+..|+..-. .+.+|+... +.....++-+ |-+|..|+.+|+|+-| |++.. ...|
T Consensus 3 v~LNVGG----~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~ 77 (100)
T 1t1d_A 3 VVINVSG----LRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVF 77 (100)
T ss_dssp EEEEETT----EEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHH
T ss_pred EEEEECC----EEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHH
Confidence 6788999 899999999864432 344555431 1234566666 7899999999999999 88754 2345
Q ss_pred hhhccccccCCc
Q psy4929 91 QHIESRWGYSGT 102 (633)
Q Consensus 91 q~la~~w~y~gl 102 (633)
..=+.-|++..+
T Consensus 78 ~~Ea~fy~i~~~ 89 (100)
T 1t1d_A 78 SEEIKFYELGEN 89 (100)
T ss_dssp HHHHHHTTCCHH
T ss_pred HHHHHHcCCCHH
Confidence 555666777655
No 65
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=67.87 E-value=5.3 Score=39.86 Aligned_cols=83 Identities=24% Similarity=0.404 Sum_probs=68.4
Q ss_pred cHHHHHHHHHhCCCcccEEEEeCCCccceEEEeEEeEeeccChhhhhhhcCCCC-CCCCeEEcC------CCCHhhhhhh
Q psy4929 3 LVKERFAFMFNNEILCDVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGTLA-TRSDEIELP------DVEPAAFLAL 75 (633)
Q Consensus 3 tl~~~l~~l~~~~~~sDV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~~~-~~~~~I~l~------dv~~~~f~~l 75 (633)
++.+++++++++|.+|||+|+||++ +++.|+|||+|||++|+||++||.++|. +...+|.++ ++++++|+.+
T Consensus 18 ~ll~~l~~l~~~~~~~Dv~l~v~~~-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~l 96 (279)
T 3i3n_A 18 ELSWRQNEQRRQGLFCDITLCFGGA-GGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAV 96 (279)
T ss_dssp HHHHHHHHHHHHTTTCCEEEECC-----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCeEEEEcCC-CCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHH
Confidence 5788999999999999999999821 0189999999999999999999999885 667899998 9999999999
Q ss_pred heecccCcchh
Q psy4929 76 LRCSMTGKEQV 86 (633)
Q Consensus 76 L~ylYTG~~~~ 86 (633)
|+|+|||++.+
T Consensus 97 l~~~Ytg~~~i 107 (279)
T 3i3n_A 97 IEYMYTGRIRV 107 (279)
T ss_dssp HHHHHHSEEEE
T ss_pred HHhhCcCCccc
Confidence 99999999863
No 66
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=64.41 E-value=3.3 Score=36.86 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=53.1
Q ss_pred cEEEEeCCCccceEEEeEEeEeeccChhhhhhhcC--CC---CCCCCeEEcCCCCHhhhhhhheecccCcchh-----hh
Q psy4929 19 DVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNG--TL---ATRSDEIELPDVEPAAFLALLRCSMTGKEQV-----VH 88 (633)
Q Consensus 19 DV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~--~~---~~~~~~I~l~dv~~~~f~~lL~ylYTG~~~~-----~~ 88 (633)
=|++-||| +.|..-+..|..... .||.. .. .....++-+ |-+|..|+.+|+|+-+|++.+ ..
T Consensus 14 ~V~LNVGG----~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~ 85 (124)
T 1s1g_A 14 LIVLNVSG----RRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECIS 85 (124)
T ss_dssp EEEEEETT----EEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHH
T ss_pred EEEEEeCC----EEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHH
Confidence 37888999 899999998865432 23322 11 133455555 679999999999999998764 23
Q ss_pred hhhhhccccccCCc
Q psy4929 89 RFQHIESRWGYSGT 102 (633)
Q Consensus 89 rfq~la~~w~y~gl 102 (633)
.|..=+..|++..+
T Consensus 86 ~l~~Ea~fy~i~~l 99 (124)
T 1s1g_A 86 AYDDELAFYGILPE 99 (124)
T ss_dssp HHHHHHHHTTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 45555677888776
No 67
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=57.16 E-value=5 Score=36.47 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=52.3
Q ss_pred cEEEEeCCCccceEEEeEEeEeeccChhhhhhhcC--CC---CCCCCeEEcCCCCHhhhhhhheecccCcchh-----hh
Q psy4929 19 DVHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNG--TL---ATRSDEIELPDVEPAAFLALLRCSMTGKEQV-----VH 88 (633)
Q Consensus 19 DV~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~--~~---~~~~~~I~l~dv~~~~f~~lL~ylYTG~~~~-----~~ 88 (633)
=|++.||| +.|...+..|..... .||.. .. .....++-+ |-+|..|+.+|+|+-+|++.+ ..
T Consensus 36 ~V~LNVGG----~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 36 LIVLNVSG----RRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp EEEEEETT----EEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred EEEEEECC----EEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 38888999 899999998865432 23332 11 133455555 679999999999999998764 23
Q ss_pred hhhhhccccccCCc
Q psy4929 89 RFQHIESRWGYSGT 102 (633)
Q Consensus 89 rfq~la~~w~y~gl 102 (633)
.|..=+..|++..+
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 45555566777665
No 68
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=51.33 E-value=3.3 Score=38.80 Aligned_cols=34 Identities=9% Similarity=0.161 Sum_probs=29.1
Q ss_pred eecccccCcchHHHHHHhhccCchHHHHHHHHhhhhcC
Q psy4929 319 QIRESNLLHGKQILLTTARLFDEPQLAALCLDTIDKNT 356 (633)
Q Consensus 319 ~l~~~~~~~~~~~lL~~Ad~f~~~~l~~~C~~~L~~~l 356 (633)
++....+.+ |+.||+|+++..|..+||..+..++
T Consensus 100 ~vd~~~Lfe----Li~AAnyLdIk~Lldl~c~~vA~~i 133 (169)
T 3v7d_A 100 KVDQEMLYE----IILAANYLNIKPLLDAGCKVVAEMI 133 (169)
T ss_dssp CSCHHHHHH----HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHH----HHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 455566666 9999999999999999999998776
No 69
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=50.93 E-value=4 Score=35.11 Aligned_cols=75 Identities=15% Similarity=0.167 Sum_probs=51.4
Q ss_pred EEEEeCCCccceEEEeEEeEeeccChhhhhhhcCC--C---CCCCCeEEcCCCCHhhhhhhheecccCcchhh-----hh
Q psy4929 20 VHFIVGRETELQRIPAHRFVLSVGSVVFDAMFNGT--L---ATRSDEIELPDVEPAAFLALLRCSMTGKEQVV-----HR 89 (633)
Q Consensus 20 V~f~v~~~~~~~~f~aHk~VLaa~S~yF~amf~~~--~---~~~~~~I~l~dv~~~~f~~lL~ylYTG~~~~~-----~r 89 (633)
|++-||| +.|...+..|..... .||... . .....++-+ |-+|..|+.+|+|+-+|++... ..
T Consensus 2 V~LNVGG----~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~ 73 (105)
T 1nn7_A 2 IVLNVSG----TRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISA 73 (105)
T ss_dssp EEEEETT----EEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred EEEEECC----EEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 6788999 899998888865432 233221 0 123445555 6799999999999999987542 34
Q ss_pred hhhhccccccCCc
Q psy4929 90 FQHIESRWGYSGT 102 (633)
Q Consensus 90 fq~la~~w~y~gl 102 (633)
|..=+.-|++..+
T Consensus 74 l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 74 YDEELAFFGLIPE 86 (105)
T ss_dssp HHHHHHHHTCCSC
T ss_pred HHHHHHHcCCCHH
Confidence 5555677888776
No 70
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=41.09 E-value=27 Score=31.54 Aligned_cols=78 Identities=22% Similarity=0.218 Sum_probs=51.7
Q ss_pred hhcccccccccccccCC-----CCCCCCCCCchhhhcccccCCCCCCCcchhcHHHHHHHHhhcCChHHHHHHHHHHHhc
Q psy4929 361 AADGFTDKVVTLSSFSS-----SDGRKPSAPDSRCRSRLSANPGIEPSAWQANLTYHCAPARLFDEPQLAALCLDTIDKN 435 (633)
Q Consensus 361 ~~~~~~~~~~~~~~~~~-----~~~~~~~a~~~~c~~~L~~~~~~~~~l~~~Nc~~il~~A~~~~~~~L~~~c~~fI~~n 435 (633)
+.|+|++.......... ...++.......|.++|... ++.+||+.++.+|..|++++|.+.|.+||.+|
T Consensus 90 l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~------l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~ 163 (172)
T 3htm_A 90 MCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSN------LSVENAAEILILADLHSADQLKTQAVDFINYH 163 (172)
T ss_dssp HHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHT------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh------CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 45677775432222211 12333334455899998875 78899999999999999999999999999999
Q ss_pred hHHHhcCCC
Q psy4929 436 TPDALAADG 444 (633)
Q Consensus 436 f~~v~~see 444 (633)
|.+++++++
T Consensus 164 ~~~v~~s~~ 172 (172)
T 3htm_A 164 ATDVLETSG 172 (172)
T ss_dssp C--------
T ss_pred HHHHHcCCC
Confidence 999998764
No 71
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=36.48 E-value=20 Score=31.46 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=23.2
Q ss_pred hhcHHHHHHHHhhcCChHHHHHHHHHHHhch
Q psy4929 406 QANLTYHCAPARLFDEPQLAALCLDTIDKNT 436 (633)
Q Consensus 406 ~~Nc~~il~~A~~~~~~~L~~~c~~fI~~nf 436 (633)
.+|+..++..|+.|+.+.|.+.|.+++.++.
T Consensus 93 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 93 DKMADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp GGTHHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 3788899999999999999999988887654
No 72
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=34.30 E-value=23 Score=35.72 Aligned_cols=54 Identities=24% Similarity=0.260 Sum_probs=41.5
Q ss_pred CCchhhhcccccCCCCCCCcchhcHHHHHHHHhhcCChHHHHHHHHHHHhchHHHhcCCC
Q psy4929 385 APDSRCRSRLSANPGIEPSAWQANLTYHCAPARLFDEPQLAALCLDTIDKNTPDALAADG 444 (633)
Q Consensus 385 a~~~~c~~~L~~~~~~~~~l~~~Nc~~il~~A~~~~~~~L~~~c~~fI~~nf~~v~~see 444 (633)
.....|.++|... ++++||+.++.+|+.|++++|.+.|.+||..||.+|+++++
T Consensus 259 ~l~~~c~~~l~~~------~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~g 312 (312)
T 3hqi_A 259 RLKVMCEDALCSN------LSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 312 (312)
T ss_dssp HHHHHHHHHHHTT------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHcc------CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 3456899999865 67799999999999999999999999999999999998864
No 73
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=20.62 E-value=96 Score=19.15 Aligned_cols=23 Identities=26% Similarity=0.336 Sum_probs=18.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHHH
Q psy4929 410 TYHCAPARLFDEPQLAALCLDTI 432 (633)
Q Consensus 410 ~~il~~A~~~~~~~L~~~c~~fI 432 (633)
|.++.+|..++.|+|..+|++-.
T Consensus 2 ckvmcyaqrhsspellrrcldnc 24 (26)
T 2plx_B 2 CKVMCYAQRHSSPELLRRCLDNC 24 (26)
T ss_dssp HHHHHHHBCCCCHHHHHHHHHHH
T ss_pred ceEEeehhhcCCHHHHHHHHhcc
Confidence 45677899999999999998643
Done!