Query psy4939
Match_columns 302
No_of_seqs 249 out of 1600
Neff 9.3
Searched_HMMs 46136
Date Fri Aug 16 21:44:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4939.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4939hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158|consensus 100.0 2.8E-54 6.1E-59 396.5 24.0 226 52-297 264-499 (499)
2 KOG0157|consensus 100.0 3.5E-51 7.7E-56 385.0 20.5 225 52-297 270-496 (497)
3 KOG0156|consensus 100.0 4.1E-50 9E-55 372.9 21.9 220 55-296 264-487 (489)
4 PLN02169 fatty acid (omega-1)- 100.0 1.5E-49 3.3E-54 375.2 22.2 216 55-296 277-499 (500)
5 KOG0159|consensus 100.0 1E-49 2.2E-54 360.0 18.6 209 70-298 311-519 (519)
6 PLN02971 tryptophan N-hydroxyl 100.0 2.2E-49 4.7E-54 377.8 21.9 222 54-296 304-533 (543)
7 PLN03195 fatty acid omega-hydr 100.0 3E-49 6.4E-54 375.2 21.9 225 54-297 270-516 (516)
8 PLN02394 trans-cinnamate 4-mon 100.0 4.8E-49 1E-53 372.8 22.8 223 54-297 273-502 (503)
9 PLN00168 Cytochrome P450; Prov 100.0 6.2E-49 1.3E-53 373.1 23.1 226 54-298 282-518 (519)
10 PLN02738 carotene beta-ring hy 100.0 8.9E-49 1.9E-53 376.9 23.7 223 54-300 373-598 (633)
11 PLN02500 cytochrome P450 90B1 100.0 8.3E-49 1.8E-53 370.0 23.0 216 54-295 262-488 (490)
12 PF00067 p450: Cytochrome P450 100.0 1.3E-48 2.8E-53 362.8 20.0 221 53-293 237-463 (463)
13 PLN02426 cytochrome P450, fami 100.0 2.5E-48 5.4E-53 366.7 21.6 222 54-298 277-501 (502)
14 PLN02290 cytokinin trans-hydro 100.0 4.3E-48 9.2E-53 367.4 22.5 220 54-297 291-515 (516)
15 PLN02655 ent-kaurene oxidase 100.0 4.9E-48 1.1E-52 362.5 22.7 220 54-297 244-464 (466)
16 PLN02774 brassinosteroid-6-oxi 100.0 4.1E-48 8.8E-53 362.8 22.0 218 54-295 243-462 (463)
17 PLN02183 ferulate 5-hydroxylas 100.0 4.5E-48 9.7E-53 367.0 22.4 223 54-296 271-511 (516)
18 PTZ00404 cytochrome P450; Prov 100.0 5.1E-48 1.1E-52 364.0 22.4 219 54-296 262-482 (482)
19 PLN03234 cytochrome P450 83B1; 100.0 5.5E-48 1.2E-52 365.3 22.2 223 54-296 264-498 (499)
20 PLN00110 flavonoid 3',5'-hydro 100.0 6.6E-48 1.4E-52 364.5 21.1 226 54-300 266-500 (504)
21 PLN03018 homomethionine N-hydr 100.0 3.7E-47 8E-52 360.9 24.2 224 54-297 291-524 (534)
22 PLN03141 3-epi-6-deoxocathaste 100.0 4.2E-47 9E-52 355.0 23.3 217 54-298 232-451 (452)
23 PLN03112 cytochrome P450 famil 100.0 3.2E-47 7E-52 361.2 22.3 227 54-300 273-511 (514)
24 PLN02966 cytochrome P450 83A1 100.0 6.2E-47 1.3E-51 358.2 23.1 198 55-271 266-470 (502)
25 PLN02687 flavonoid 3'-monooxyg 100.0 5.1E-47 1.1E-51 359.8 22.1 224 54-297 270-509 (517)
26 PLN02987 Cytochrome P450, fami 100.0 1.6E-46 3.4E-51 352.0 23.6 221 54-299 249-471 (472)
27 PLN02302 ent-kaurenoic acid ox 100.0 4.1E-46 8.9E-51 351.8 22.7 220 54-297 265-488 (490)
28 PLN02936 epsilon-ring hydroxyl 100.0 1.1E-45 2.3E-50 348.5 23.2 220 54-298 260-483 (489)
29 PLN02196 abscisic acid 8'-hydr 100.0 1.1E-45 2.3E-50 346.4 21.7 215 54-296 246-462 (463)
30 KOG0684|consensus 100.0 3E-45 6.5E-50 324.1 20.0 230 52-297 250-485 (486)
31 COG2124 CypX Cytochrome P450 [ 100.0 1.1E-41 2.3E-46 313.9 18.0 198 52-296 212-410 (411)
32 PLN02648 allene oxide synthase 100.0 8.1E-39 1.8E-43 299.0 21.3 195 60-272 257-463 (480)
33 PF08492 SRP72: SRP72 RNA-bind 63.6 4.7 0.0001 26.3 1.4 9 216-224 44-52 (59)
34 PF05952 ComX: Bacillus compet 45.0 21 0.00045 23.1 2.1 19 97-115 4-22 (57)
35 PF12554 MOZART1: Mitotic-spin 42.8 82 0.0018 19.5 4.6 42 75-116 6-47 (48)
36 PF14129 DUF4296: Domain of un 38.9 1.3E+02 0.0029 20.9 6.8 51 70-120 28-78 (87)
37 PF12508 DUF3714: Protein of u 38.1 13 0.00028 30.9 0.5 42 136-197 53-94 (200)
38 PF09201 SRX: SRX; InterPro: 32.7 40 0.00086 26.0 2.3 23 241-263 18-40 (148)
39 KOG3506|consensus 26.6 31 0.00067 21.9 0.7 10 234-243 12-21 (56)
40 TIGR03779 Bac_Flav_CT_M Bacter 20.8 29 0.00062 32.1 -0.4 12 186-197 286-297 (410)
41 PF08285 DPM3: Dolichol-phosph 20.5 1.6E+02 0.0036 20.9 3.5 28 92-119 53-80 (91)
No 1
>KOG0158|consensus
Probab=100.00 E-value=2.8e-54 Score=396.53 Aligned_cols=226 Identities=33% Similarity=0.658 Sum_probs=204.6
Q ss_pred hhhhhHHHHHHHHhcC---C----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCC
Q psy4939 52 KKRLAFLDLLIESAQN---G----VVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSD 124 (302)
Q Consensus 52 ~~~~d~l~~ll~~~~~---~----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~ 124 (302)
..+.||++.+++.... + ..+|.+||+++++.|++||.||||++|++++|+|++||++|+|||+||+++.....
T Consensus 264 ~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~ 343 (499)
T KOG0158|consen 264 IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKE 343 (499)
T ss_pred CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccC
Confidence 4567999999988632 1 14999999999999999999999999999999999999999999999999976654
Q ss_pred CCCChhhccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEccccccc
Q psy4939 125 RPCTFQDTLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHR 204 (302)
Q Consensus 125 ~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~ 204 (302)
. +++|.+.+|+||++||+||||+||+++.+.|.|++|+++++ ++.|+||+.|.++.+++||
T Consensus 344 ~-ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~------------------~~~i~kG~~V~Ip~~alH~ 404 (499)
T KOG0158|consen 344 G-LTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPG------------------GFVIPKGTPVMIPTYALHH 404 (499)
T ss_pred C-CCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCC------------------CeEeCCCCEEEeecccccC
Confidence 4 99999999999999999999999999999999999999984 6999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeec---ce
Q psy4939 205 QPDTYPNPDVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQG---DI 281 (302)
Q Consensus 205 d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~---~~ 281 (302)
||++||||++|+||||.+++....++..|+|||.|+|.|+|++||.+|+|+.|+.||++|+++..+..... ... ..
T Consensus 405 Dp~~~p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~-~~~~~~~~ 483 (499)
T KOG0158|consen 405 DPEYWPEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIP-LEGDPKGF 483 (499)
T ss_pred CcccCCCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCc-ccCCccce
Confidence 99999999999999999887667788999999999999999999999999999999999999987632222 333 56
Q ss_pred eeecCCCeeEEEEEcc
Q psy4939 282 ILKRTDGFKVKLTPRK 297 (302)
Q Consensus 282 ~~~~~~~~~v~~~~R~ 297 (302)
++.|.+++.+++++|+
T Consensus 484 ~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 484 TLSPKGGIWLKLEPRD 499 (499)
T ss_pred eeecCCceEEEEEeCC
Confidence 7889999999999985
No 2
>KOG0157|consensus
Probab=100.00 E-value=3.5e-51 Score=385.04 Aligned_cols=225 Identities=43% Similarity=0.801 Sum_probs=198.3
Q ss_pred hhhhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhh
Q psy4939 52 KKRLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQD 131 (302)
Q Consensus 52 ~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 131 (302)
....|+++.+....+ ..+++++|.+++.+|++||+|||+++++|++++|+.||++|+++++|+.++++......+...
T Consensus 270 ~~~~d~L~~~~~~~~--~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~ 347 (497)
T KOG0157|consen 270 KKRLDFLDTLLLEED--KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEK 347 (497)
T ss_pred chhhhHHHHHHHhcc--CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhh
Confidence 456688886333322 579999999999999999999999999999999999999999999999999975544333333
Q ss_pred ccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCC-
Q psy4939 132 TLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYP- 210 (302)
Q Consensus 132 ~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~- 210 (302)
..+|+|+++||+|||||||++|.+.|.+.+|+++++ ||.||||+.|+++.+++|||+.+|+
T Consensus 348 ~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~------------------g~~IPkG~~V~i~~~~~~r~~~~~~~ 409 (497)
T KOG0157|consen 348 LDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPG------------------GYTIPKGTNVLISIYALHRDPRVWGE 409 (497)
T ss_pred hhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCC------------------CcEeCCCCEEEEehHHhccCccccCC
Confidence 346999999999999999999999999999999964 7999999999999999999999995
Q ss_pred CCCCcCCCCCCCCccC-CCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCe
Q psy4939 211 NPDVYNPDNFLPEKCA-NRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGF 289 (302)
Q Consensus 211 ~p~~F~P~Rfl~~~~~-~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (302)
||++||||||+++... ..++++|+|||+|+|.|+|+.||++||+++++.|+++|+|++..+.. .......++.+..++
T Consensus 410 dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-~~~~~~~~l~~~~gl 488 (497)
T KOG0157|consen 410 DPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-PKPVPELTLRPKNGL 488 (497)
T ss_pred ChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-ceeeeEEEEEecCCe
Confidence 9999999999975433 56689999999999999999999999999999999999999887654 555567889999999
Q ss_pred eEEEEEcc
Q psy4939 290 KVKLTPRK 297 (302)
Q Consensus 290 ~v~~~~R~ 297 (302)
+|++++|.
T Consensus 489 ~v~~~~r~ 496 (497)
T KOG0157|consen 489 KVKLRPRG 496 (497)
T ss_pred EEEEEeCC
Confidence 99999986
No 3
>KOG0156|consensus
Probab=100.00 E-value=4.1e-50 Score=372.94 Aligned_cols=220 Identities=30% Similarity=0.565 Sum_probs=195.8
Q ss_pred hhHHHHHHHHhcC-CC-CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhhc
Q psy4939 55 LAFLDLLIESAQN-GV-VLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQDT 132 (302)
Q Consensus 55 ~d~l~~ll~~~~~-~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 132 (302)
.||+|.+++..++ .. .+++++|...+.++++||+|||++++.|++.+|++||++|+|+++||+++++.+.. ++.+|+
T Consensus 264 ~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~-v~e~D~ 342 (489)
T KOG0156|consen 264 RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRL-VSESDL 342 (489)
T ss_pred CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC-CChhhh
Confidence 6999999987532 22 29999999999999999999999999999999999999999999999999987744 899999
Q ss_pred cCCHHHHHHHHHhhccCCCccc-ccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCC
Q psy4939 133 LEMKYMERCIMETLRMFPPVPV-IARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPN 211 (302)
Q Consensus 133 ~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~ 211 (302)
.++|||+|+|+|++|+||++|. ++|.+++|+.++ ||.|||||.|+++.|++||||++|+|
T Consensus 343 ~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~-------------------Gy~IPkgT~v~vn~~ai~rDp~vw~d 403 (489)
T KOG0156|consen 343 PKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIG-------------------GYDIPKGTTVLVNLWAIHRDPKVWED 403 (489)
T ss_pred ccCHHHHHHHHHHHhcCCCccccccccccCCeeEc-------------------CEEcCCCCEEEEeehhhhcCCccCCC
Confidence 9999999999999999999997 589999999999 89999999999999999999999999
Q ss_pred CCCcCCCCCCCCc-cCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCee
Q psy4939 212 PDVYNPDNFLPEK-CANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGFK 290 (302)
Q Consensus 212 p~~F~P~Rfl~~~-~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (302)
|++|+||||++++ ... ....++|||.|+|+|||..+|++++.++++.|+++|+|+++++..+..... .+...+.++.
T Consensus 404 P~eF~PERFl~~~d~~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~~-~~~~~~~pl~ 481 (489)
T KOG0156|consen 404 PEEFKPERFLDSNDGKG-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEAG-LTLKKKKPLK 481 (489)
T ss_pred ccccChhhhcCCccccC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCcccc-cceecCCcce
Confidence 9999999999974 444 678899999999999999999999999999999999999987622333332 4455555677
Q ss_pred EEEEEc
Q psy4939 291 VKLTPR 296 (302)
Q Consensus 291 v~~~~R 296 (302)
+...+|
T Consensus 482 ~~~~~r 487 (489)
T KOG0156|consen 482 AVPVPR 487 (489)
T ss_pred eeeecC
Confidence 766665
No 4
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=1.5e-49 Score=375.23 Aligned_cols=216 Identities=23% Similarity=0.482 Sum_probs=189.9
Q ss_pred hhHHHHHHHHhcC----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChh
Q psy4939 55 LAFLDLLIESAQN----GVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQ 130 (302)
Q Consensus 55 ~d~l~~ll~~~~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 130 (302)
.|+++.+++.... +..+++++|.+++.++++||+|||+++++|++++|+.||++|+|+++|++++ ++.+
T Consensus 277 ~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v-------~~~~ 349 (500)
T PLN02169 277 KDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK-------FDNE 349 (500)
T ss_pred cCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh-------CCHH
Confidence 5899999875421 1247899999999999999999999999999999999999999999999987 3678
Q ss_pred hccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCC-
Q psy4939 131 DTLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTY- 209 (302)
Q Consensus 131 ~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~- 209 (302)
++.+||||+|||+|+||+||++|.+.|.+.+|.++.+ |+.||||+.|+++.|++||||++|
T Consensus 350 dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~------------------G~~IpkGt~v~i~~~~ihrd~~~w~ 411 (500)
T PLN02169 350 DLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPS------------------GHKVDAESKIVICIYALGRMRSVWG 411 (500)
T ss_pred HHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccC------------------CEEECCCCEEEEcHHHhhCCccccC
Confidence 9999999999999999999999999998887766632 899999999999999999999999
Q ss_pred CCCCCcCCCCCCCCccCCC--CCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCC
Q psy4939 210 PNPDVYNPDNFLPEKCANR--HYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTD 287 (302)
Q Consensus 210 ~~p~~F~P~Rfl~~~~~~~--~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 287 (302)
+||++|+||||++++.... .++.|+|||+|+|+|+|++||++|++++++.|+++|++++.++. ++......++.++.
T Consensus 412 ~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~-~~~~~~~~~l~~~~ 490 (500)
T PLN02169 412 EDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH-KIEAIPSILLRMKH 490 (500)
T ss_pred CChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC-CcccccceEEecCC
Confidence 8999999999997644332 36789999999999999999999999999999999999987543 33334456788899
Q ss_pred CeeEEEEEc
Q psy4939 288 GFKVKLTPR 296 (302)
Q Consensus 288 ~~~v~~~~R 296 (302)
+++|++++|
T Consensus 491 gl~l~l~~~ 499 (500)
T PLN02169 491 GLKVTVTKK 499 (500)
T ss_pred CEEEEEEeC
Confidence 999999987
No 5
>KOG0159|consensus
Probab=100.00 E-value=1e-49 Score=360.00 Aligned_cols=209 Identities=30% Similarity=0.544 Sum_probs=197.1
Q ss_pred CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhhccCCHHHHHHHHHhhccC
Q psy4939 70 VLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQDTLEMKYMERCIMETLRMF 149 (302)
Q Consensus 70 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~ 149 (302)
.++.+++..+++.+++||.|||++++.|++|.|++||++|++|++|+.++....+..++.+++.++|||+|||||++|||
T Consensus 311 ~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRly 390 (519)
T KOG0159|consen 311 ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLY 390 (519)
T ss_pred cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhcee
Confidence 48899999999999999999999999999999999999999999999999988777889999999999999999999999
Q ss_pred CCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCCCCCcCCCCCCCCccCCCC
Q psy4939 150 PPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPNPDVYNPDNFLPEKCANRH 229 (302)
Q Consensus 150 p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~ 229 (302)
|.+++..|...+|.++. ||.|||||.|.++.+.+.+||++|++|++|+||||++++....+
T Consensus 391 Pv~~~~~R~l~~D~vL~-------------------gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~~~~~ 451 (519)
T KOG0159|consen 391 PVVPGNGRVLPKDLVLS-------------------GYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPSTKTIH 451 (519)
T ss_pred ccccccccccchhceec-------------------cceecCCCeEEEeehhhccChhhCCCccccChhhhcccccCCCC
Confidence 99999999999999999 89999999999999999999999999999999999998766778
Q ss_pred CccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCeeEEEEEccC
Q psy4939 230 YYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGFKVKLTPRKK 298 (302)
Q Consensus 230 ~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 298 (302)
++.++|||.|+|+|+|++||.+||.++|++++++|+++.... .+++....+++.|..++.++|++|.+
T Consensus 452 pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~-~pv~~~~~~il~P~~~l~f~f~~r~~ 519 (519)
T KOG0159|consen 452 PFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE-EPVEYVYRFILVPNRPLRFKFRPRNE 519 (519)
T ss_pred CceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC-CCccceeEEEEcCCCCcceeeeeCCC
Confidence 999999999999999999999999999999999999998765 46676677888899999999999863
No 6
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=2.2e-49 Score=377.84 Aligned_cols=222 Identities=22% Similarity=0.399 Sum_probs=194.3
Q ss_pred hhhHHHHHHHHhcC-CC-CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhh
Q psy4939 54 RLAFLDLLIESAQN-GV-VLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQD 131 (302)
Q Consensus 54 ~~d~l~~ll~~~~~-~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 131 (302)
..|+++.|++..++ +. .+++++|.+++.++++||+|||+++++|++++|+.||++|+|+++||+++++.+ ..+++++
T Consensus 304 ~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~-~~~t~~d 382 (543)
T PLN02971 304 IEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKE-RFVQESD 382 (543)
T ss_pred CcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCCCHHH
Confidence 35899999986533 22 499999999999999999999999999999999999999999999999998753 5689999
Q ss_pred ccCCHHHHHHHHHhhccCCCccc-ccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCC
Q psy4939 132 TLEMKYMERCIMETLRMFPPVPV-IARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYP 210 (302)
Q Consensus 132 ~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~ 210 (302)
+.+|||++|||+|+||++|+++. +.|.+.+|+++. ||.||||+.|+++.|++||||++|+
T Consensus 383 ~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~-------------------G~~IpkGt~v~~~~~~~~~d~~~~~ 443 (543)
T PLN02971 383 IPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVA-------------------GYHIPKGSQVLLSRYGLGRNPKVWS 443 (543)
T ss_pred hccCHHHHHHHHHHHhcCCCcccCcceecCCCeeEC-------------------CEEECCCCEEEECcHHhcCChhhCC
Confidence 99999999999999999999997 679999999998 8999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccC---CCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCcee--ecceeeec
Q psy4939 211 NPDVYNPDNFLPEKCA---NRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKL--QGDIILKR 285 (302)
Q Consensus 211 ~p~~F~P~Rfl~~~~~---~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~--~~~~~~~~ 285 (302)
||++|+||||+++... ..+++.|+|||.|+|.|+|++||++|++++++.|+++|+|++.++...... ..+ ++..
T Consensus 444 dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~ 522 (543)
T PLN02971 444 DPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFL 522 (543)
T ss_pred CccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccc
Confidence 9999999999975422 134568999999999999999999999999999999999998765433332 223 4434
Q ss_pred CCCeeEEEEEc
Q psy4939 286 TDGFKVKLTPR 296 (302)
Q Consensus 286 ~~~~~v~~~~R 296 (302)
++++.+.+++|
T Consensus 523 ~~~~~~~~~~~ 533 (543)
T PLN02971 523 SKPLVMVGELR 533 (543)
T ss_pred cccceeeeeec
Confidence 56899999999
No 7
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=3e-49 Score=375.25 Aligned_cols=225 Identities=24% Similarity=0.453 Sum_probs=194.1
Q ss_pred hhhHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC---------
Q psy4939 54 RLAFLDLLIESAQN-GVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDS--------- 123 (302)
Q Consensus 54 ~~d~l~~ll~~~~~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~--------- 123 (302)
..|+++.+++..++ +..++++++.+++.++++||+|||+++++|++++|++||++|+||++|+++++...
T Consensus 270 ~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~ 349 (516)
T PLN03195 270 KHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDS 349 (516)
T ss_pred cccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccccccccc
Confidence 45899999976433 34699999999999999999999999999999999999999999999999886431
Q ss_pred ----------CCCCChhhccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCC
Q psy4939 124 ----------DRPCTFQDTLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANC 193 (302)
Q Consensus 124 ----------~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~ 193 (302)
...++++++.++|||+|||+|+||++|+++...|.+.+|..+.+ |+.|||||
T Consensus 350 ~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~------------------G~~IpkGt 411 (516)
T PLN03195 350 QSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPD------------------GTKVKAGG 411 (516)
T ss_pred chhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCC------------------CcEECCCC
Confidence 23578999999999999999999999999998888877766632 89999999
Q ss_pred EEEEcccccccCCCCC-CCCCCcCCCCCCCCcc-CCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCC
Q psy4939 194 TVVIGTYKIHRQPDTY-PNPDVYNPDNFLPEKC-ANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTK 271 (302)
Q Consensus 194 ~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~~-~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~ 271 (302)
.|.++.|++||||++| +||++|+||||++.+. ....++.|+|||.|+|+|+|++||++|++++++.|+++|++++.++
T Consensus 412 ~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~ 491 (516)
T PLN03195 412 MVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPG 491 (516)
T ss_pred EEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCC
Confidence 9999999999999999 9999999999996432 2335567999999999999999999999999999999999998654
Q ss_pred CcCceeecceeeecCCCeeEEEEEcc
Q psy4939 272 LEDWKLQGDIILKRTDGFKVKLTPRK 297 (302)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~v~~~~R~ 297 (302)
. +.......++.++.+++|++++|+
T Consensus 492 ~-~~~~~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 492 H-PVKYRMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred C-cceeeeeeEEecCCCEEEEEEeCC
Confidence 2 333333455778889999999985
No 8
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=4.8e-49 Score=372.81 Aligned_cols=223 Identities=26% Similarity=0.502 Sum_probs=194.5
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhhcc
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQDTL 133 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 133 (302)
..|+++.|++..+++ .++++++..++..+++||+|||+++++|++++|++||++|++|++|++++++.+ ..++.+++.
T Consensus 273 ~~d~l~~ll~~~~~~-~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~~l~ 350 (503)
T PLN02394 273 LKCAIDHILEAQKKG-EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG-NQVTEPDTH 350 (503)
T ss_pred hhhHHHHHHhccccC-CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC-CCCCHhHHh
Confidence 468999999876543 599999999999999999999999999999999999999999999999998753 457899999
Q ss_pred CCHHHHHHHHHhhccCCCcccc-cceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCCC
Q psy4939 134 EMKYMERCIMETLRMFPPVPVI-ARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPNP 212 (302)
Q Consensus 134 ~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 212 (302)
++|||+|||+|+||++|+++.. .|.+.+|++++ ||.||+||.|.++.|++||||++|+||
T Consensus 351 ~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~-------------------g~~IP~Gt~V~~~~~~~~rd~~~~~~P 411 (503)
T PLN02394 351 KLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLG-------------------GYDIPAESKILVNAWWLANNPELWKNP 411 (503)
T ss_pred hCHHHHHHHHHHHhcCCCcccccceecCCCcccC-------------------CEEeCCCCEEEEchHHHhCCcccCCCc
Confidence 9999999999999999999986 58888898887 899999999999999999999999999
Q ss_pred CCcCCCCCCCCccC---CCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceee--cc-eeeecC
Q psy4939 213 DVYNPDNFLPEKCA---NRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQ--GD-IILKRT 286 (302)
Q Consensus 213 ~~F~P~Rfl~~~~~---~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~--~~-~~~~~~ 286 (302)
++|+||||++++.. ....+.|+|||.|+|+|+|++||++|++++++.|+++|++++.++.+.+... .+ +.+..+
T Consensus 412 ~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (503)
T PLN02394 412 EEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIA 491 (503)
T ss_pred cccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccC
Confidence 99999999975431 2235679999999999999999999999999999999999987654323333 22 344356
Q ss_pred CCeeEEEEEcc
Q psy4939 287 DGFKVKLTPRK 297 (302)
Q Consensus 287 ~~~~v~~~~R~ 297 (302)
.++.+++.||.
T Consensus 492 ~~~~~~~~~r~ 502 (503)
T PLN02394 492 KHSTVVFKPRS 502 (503)
T ss_pred CCceEEeecCC
Confidence 68999999996
No 9
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=6.2e-49 Score=373.14 Aligned_cols=226 Identities=23% Similarity=0.444 Sum_probs=196.2
Q ss_pred hhhHHHHHHHHh---cCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChh
Q psy4939 54 RLAFLDLLIESA---QNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQ 130 (302)
Q Consensus 54 ~~d~l~~ll~~~---~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 130 (302)
+.|+++.|++.. +.+..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.....++.+
T Consensus 282 ~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~ 361 (519)
T PLN00168 282 EHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEE 361 (519)
T ss_pred cccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHH
Confidence 458999999764 22346999999999999999999999999999999999999999999999999987654568999
Q ss_pred hccCCHHHHHHHHHhhccCCCcccc-cceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCC
Q psy4939 131 DTLEMKYMERCIMETLRMFPPVPVI-ARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTY 209 (302)
Q Consensus 131 ~~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~ 209 (302)
++.+||||+|||+|++|++|+++.. .|.+.+|++++ ||.|||||.|.++.+++||||++|
T Consensus 362 ~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~-------------------g~~IpkGt~v~~~~~~~~~d~~~~ 422 (519)
T PLN00168 362 DVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVG-------------------GYLIPKGATVNFMVAEMGRDEREW 422 (519)
T ss_pred HhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCC-------------------CEEECCCCEEEEChHHHhcCcccc
Confidence 9999999999999999999999875 79999999998 899999999999999999999999
Q ss_pred CCCCCcCCCCCCCCcc------CCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCc-Cceeeccee
Q psy4939 210 PNPDVYNPDNFLPEKC------ANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLE-DWKLQGDII 282 (302)
Q Consensus 210 ~~p~~F~P~Rfl~~~~------~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~ 282 (302)
+||++|+||||+++.. ...+.+.|+|||.|+|+|+|++||++|++++++.|+++|++++.++.. +......++
T Consensus 423 ~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~ 502 (519)
T PLN00168 423 ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFT 502 (519)
T ss_pred CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeE
Confidence 9999999999997432 112346799999999999999999999999999999999999865422 222223355
Q ss_pred eecCCCeeEEEEEccC
Q psy4939 283 LKRTDGFKVKLTPRKK 298 (302)
Q Consensus 283 ~~~~~~~~v~~~~R~~ 298 (302)
..++++++|++++|+.
T Consensus 503 ~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 503 TVMAKPLRARLVPRRT 518 (519)
T ss_pred EeecCCcEEEEEeccC
Confidence 6677789999999964
No 10
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=8.9e-49 Score=376.90 Aligned_cols=223 Identities=26% Similarity=0.534 Sum_probs=198.3
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhhcc
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQDTL 133 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 133 (302)
+.|+++.|++.. ..+++++|.++++.+++||+|||+++|+|++++|++||++|+||++|+++++++ ..++++++.
T Consensus 373 ~~dil~~Ll~~~---~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~--~~~t~edL~ 447 (633)
T PLN02738 373 DPSILHFLLASG---DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD--RFPTIEDMK 447 (633)
T ss_pred cchHHHHHHHcC---CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC--CCCCHHHHc
Confidence 458999998753 358999999999999999999999999999999999999999999999999873 457999999
Q ss_pred CCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCCCC
Q psy4939 134 EMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPNPD 213 (302)
Q Consensus 134 ~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~ 213 (302)
+||||+|||+|+|||+|+++.+.|++.+|.+++ ||.|||||.|.++.|.+||||++|+||+
T Consensus 448 kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~-------------------gy~IPkGT~V~~s~~~ihrdp~ifpdP~ 508 (633)
T PLN02738 448 KLKYTTRVINESLRLYPQPPVLIRRSLENDMLG-------------------GYPIKRGEDIFISVWNLHRSPKHWDDAE 508 (633)
T ss_pred cCHHHHHHHHHHHhcCCCccccceeeccCceEC-------------------CEEECCCCEEEecHHHHhCCccccCCcc
Confidence 999999999999999999999889999999987 8999999999999999999999999999
Q ss_pred CcCCCCCCCCcc---CCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCee
Q psy4939 214 VYNPDNFLPEKC---ANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGFK 290 (302)
Q Consensus 214 ~F~P~Rfl~~~~---~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (302)
+|+||||+.... .....+.|+|||.|+|+|+|++||++|++++|+.|+++|+|++..+...+......++.++++++
T Consensus 509 ~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~ 588 (633)
T PLN02738 509 KFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLK 588 (633)
T ss_pred ccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcE
Confidence 999999985321 12345679999999999999999999999999999999999987664445444456777889999
Q ss_pred EEEEEccCCC
Q psy4939 291 VKLTPRKKQT 300 (302)
Q Consensus 291 v~~~~R~~~~ 300 (302)
|++++|..+.
T Consensus 589 v~l~~R~~~~ 598 (633)
T PLN02738 589 MTVTRRTKPP 598 (633)
T ss_pred EEEEECCCCC
Confidence 9999997653
No 11
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=8.3e-49 Score=369.97 Aligned_cols=216 Identities=20% Similarity=0.385 Sum_probs=189.1
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC----CCCCCCh
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGD----SDRPCTF 129 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~----~~~~~~~ 129 (302)
..|+++.+++. ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+. +...+++
T Consensus 262 ~~d~l~~ll~~----~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~ 337 (490)
T PLN02500 262 EDDLLGWVLKH----SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNW 337 (490)
T ss_pred cchHHHHHHhc----cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCH
Confidence 35899998874 248999999999999999999999999999999999999999999999998642 2245799
Q ss_pred hhccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCC
Q psy4939 130 QDTLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTY 209 (302)
Q Consensus 130 ~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~ 209 (302)
+|+.++||++|||+|++|++|+++.+.|.+.+|++++ ||.|||||.|+++.|++||||++|
T Consensus 338 ~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~-------------------G~~IPkGt~V~~~~~~~hrdp~~~ 398 (490)
T PLN02500 338 EDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYK-------------------GYDIPSGWKVLPVIAAVHLDSSLY 398 (490)
T ss_pred HHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeC-------------------CEEECCCCEEEechhhcccCcccC
Confidence 9999999999999999999999999899999999998 899999999999999999999999
Q ss_pred CCCCCcCCCCCCCCccCC-------CCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeeccee
Q psy4939 210 PNPDVYNPDNFLPEKCAN-------RHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDII 282 (302)
Q Consensus 210 ~~p~~F~P~Rfl~~~~~~-------~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~ 282 (302)
+||++|+||||++++... .+++.|+|||.|+|.|+|++||++|++++++.|+++|+|++.++..... .. .
T Consensus 399 ~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~--~~-~ 475 (490)
T PLN02500 399 DQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA--FP-F 475 (490)
T ss_pred CCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee--cc-c
Confidence 999999999999754321 2457899999999999999999999999999999999999876543222 12 2
Q ss_pred eecCCCeeEEEEE
Q psy4939 283 LKRTDGFKVKLTP 295 (302)
Q Consensus 283 ~~~~~~~~v~~~~ 295 (302)
..++++++|++++
T Consensus 476 ~~~~~~l~~~~~~ 488 (490)
T PLN02500 476 VDFPKGLPIRVRR 488 (490)
T ss_pred ccCCCCceEEEEe
Confidence 3456789998875
No 12
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.3e-48 Score=362.83 Aligned_cols=221 Identities=39% Similarity=0.717 Sum_probs=192.2
Q ss_pred hhhhHHHHHHHHh--cCCC-CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCCh
Q psy4939 53 KRLAFLDLLIESA--QNGV-VLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTF 129 (302)
Q Consensus 53 ~~~d~l~~ll~~~--~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 129 (302)
...|+++.++... .++. .++++++.+.+..+++||++||+.+++|++++|++||++|++|++|++.+.+.. ..++.
T Consensus 237 ~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~ 315 (463)
T PF00067_consen 237 SRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDG-REITF 315 (463)
T ss_dssp SCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTS-SSHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccc
Confidence 4568999999886 3343 799999999999999999999999999999999999999999999999998443 47889
Q ss_pred hhccCCHHHHHHHHHhhccCCCcc-cccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCC
Q psy4939 130 QDTLEMKYMERCIMETLRMFPPVP-VIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDT 208 (302)
Q Consensus 130 ~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~ 208 (302)
+++.++|||+|||+|++|++|+++ .+.|.+.+|+++. ||.|||||.|+++.+++|+||++
T Consensus 316 ~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~-------------------g~~ip~gt~v~~~~~~~~~d~~~ 376 (463)
T PF00067_consen 316 EDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLG-------------------GYFIPKGTIVIVSIYALHRDPEY 376 (463)
T ss_dssp HHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEET-------------------TEEEETTSEEEEEHHHHTTSTTT
T ss_pred cccccccccccccccccccccccccccccccccccccc-------------------ccccccccccccccccccccccc
Confidence 999999999999999999999999 6889999999998 89999999999999999999999
Q ss_pred CCCCCCcCCCCCCCCcc-CCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCce-eecceeeecC
Q psy4939 209 YPNPDVYNPDNFLPEKC-ANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWK-LQGDIILKRT 286 (302)
Q Consensus 209 ~~~p~~F~P~Rfl~~~~-~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~ 286 (302)
|+||++|+|+||++.+. .......|+|||.|+|.|+|++||++|++++++.||++|++++.++..... .....++.++
T Consensus 377 ~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~ 456 (463)
T PF00067_consen 377 FPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPP 456 (463)
T ss_dssp SSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEE
T ss_pred cccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeC
Confidence 99999999999998876 346778899999999999999999999999999999999999966443322 2222345566
Q ss_pred CCeeEEE
Q psy4939 287 DGFKVKL 293 (302)
Q Consensus 287 ~~~~v~~ 293 (302)
.++.|+|
T Consensus 457 ~~~~~~~ 463 (463)
T PF00067_consen 457 KPLKVKF 463 (463)
T ss_dssp SSSEEEE
T ss_pred CCcEEeC
Confidence 6788775
No 13
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=2.5e-48 Score=366.74 Aligned_cols=222 Identities=20% Similarity=0.455 Sum_probs=194.6
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhhcc
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQDTL 133 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 133 (302)
+.|+++.+++.. .+++++.+++.++++||+|||+++++|++++|++||++|+||++|++++.+.....++++++.
T Consensus 277 ~~dll~~ll~~~-----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~ 351 (502)
T PLN02426 277 SKDLLSRFMASI-----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMK 351 (502)
T ss_pred cchHHHHHHhcC-----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHh
Confidence 458999999753 268899999999999999999999999999999999999999999999887554568999999
Q ss_pred CCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCC-CCC
Q psy4939 134 EMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTY-PNP 212 (302)
Q Consensus 134 ~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p 212 (302)
+||||+|||+|+||++|+++...|.+.+|.++.+ |+.||+||.|.++.+++||||++| +||
T Consensus 352 ~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~------------------G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp 413 (502)
T PLN02426 352 EMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPD------------------GTFVAKGTRVTYHPYAMGRMERIWGPDC 413 (502)
T ss_pred cChHHHHHHHHHHhCCCCCCCcceeeccCCCcCC------------------CcEECCCCEEEEchHHhcCCccccCcCh
Confidence 9999999999999999999998899999887732 899999999999999999999999 999
Q ss_pred CCcCCCCCCCCcc-CCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCc-CceeecceeeecCCCee
Q psy4939 213 DVYNPDNFLPEKC-ANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLE-DWKLQGDIILKRTDGFK 290 (302)
Q Consensus 213 ~~F~P~Rfl~~~~-~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~ 290 (302)
++|+||||+++.. ...+++.|+|||+|+|.|+|++||++|++++++.|+++|+++...+.. ........++.+++++.
T Consensus 414 ~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~ 493 (502)
T PLN02426 414 LEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLP 493 (502)
T ss_pred hhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEE
Confidence 9999999997432 123456899999999999999999999999999999999999864322 22334456788889999
Q ss_pred EEEEEccC
Q psy4939 291 VKLTPRKK 298 (302)
Q Consensus 291 v~~~~R~~ 298 (302)
|++++|..
T Consensus 494 v~~~~r~~ 501 (502)
T PLN02426 494 VRVRERVR 501 (502)
T ss_pred EEEEEccC
Confidence 99999853
No 14
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=4.3e-48 Score=367.40 Aligned_cols=220 Identities=28% Similarity=0.519 Sum_probs=194.6
Q ss_pred hhhHHHHHHHHhc----CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCCh
Q psy4939 54 RLAFLDLLIESAQ----NGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTF 129 (302)
Q Consensus 54 ~~d~l~~ll~~~~----~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 129 (302)
..|+++.+++... ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.. .+++
T Consensus 291 ~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~--~~~~ 368 (516)
T PLN02290 291 GDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE--TPSV 368 (516)
T ss_pred CCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC--CCCH
Confidence 3589999997542 223489999999999999999999999999999999999999999999999998753 6799
Q ss_pred hhccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCC
Q psy4939 130 QDTLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTY 209 (302)
Q Consensus 130 ~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~ 209 (302)
+++.+||||+|||+|+||++|+++.+.|.+.+|++++ ||.|||||.|+++.+++||||++|
T Consensus 369 ~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~-------------------g~~IP~Gt~V~~~~~~~~rdp~~~ 429 (516)
T PLN02290 369 DHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLG-------------------DLHIPKGLSIWIPVLAIHHSEELW 429 (516)
T ss_pred HHHhcChHHHHHHHHHHHcCCCccccceeecCCeeEC-------------------CEEECCCCEEEecHHHhcCChhhh
Confidence 9999999999999999999999998899999999998 899999999999999999999999
Q ss_pred -CCCCCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCC
Q psy4939 210 -PNPDVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDG 288 (302)
Q Consensus 210 -~~p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~ 288 (302)
+||++|+||||++.+ ......|+|||.|+|.|+|++||++|++++++.|+++|++++.++.. .......++.|.++
T Consensus 430 ~~dP~~F~PeRfl~~~--~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-~~~~~~~~~~p~~~ 506 (516)
T PLN02290 430 GKDANEFNPDRFAGRP--FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-HAPVVVLTIKPKYG 506 (516)
T ss_pred CCChhhcCccccCCCC--CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-cCccceeeecCCCC
Confidence 899999999999542 22345799999999999999999999999999999999999876421 22222467888899
Q ss_pred eeEEEEEcc
Q psy4939 289 FKVKLTPRK 297 (302)
Q Consensus 289 ~~v~~~~R~ 297 (302)
++|++++|+
T Consensus 507 ~~~~~~~~~ 515 (516)
T PLN02290 507 VQVCLKPLN 515 (516)
T ss_pred CeEEEEeCC
Confidence 999999986
No 15
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=4.9e-48 Score=362.50 Aligned_cols=220 Identities=27% Similarity=0.479 Sum_probs=196.5
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhhcc
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQDTL 133 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 133 (302)
+.|+++.+++.. ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++.. .++.+++.
T Consensus 244 ~~d~l~~ll~~~---~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~l~ 318 (466)
T PLN02655 244 RDCYLDFLLSEA---THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDE--RVTEEDLP 318 (466)
T ss_pred cccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC--CCCHHHHh
Confidence 348999999764 2599999999999999999999999999999999999999999999999998764 38999999
Q ss_pred CCHHHHHHHHHhhccCCCcccc-cceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCCC
Q psy4939 134 EMKYMERCIMETLRMFPPVPVI-ARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPNP 212 (302)
Q Consensus 134 ~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 212 (302)
++||++|||+|+||++|+++.. .|.+.+|++++ ||.|||||.|+++.+++||||++|+||
T Consensus 319 ~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~-------------------g~~ip~gt~v~~~~~~~~~d~~~~~~p 379 (466)
T PLN02655 319 NLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLG-------------------GYDIPAGTQIAINIYGCNMDKKRWENP 379 (466)
T ss_pred cChHHHHHHHHHhccCCCcCCCCCcccCCCcccC-------------------CEEECCCCEEEecHHHhcCCcccCCCh
Confidence 9999999999999999999986 69999999987 899999999999999999999999999
Q ss_pred CCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCeeEE
Q psy4939 213 DVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGFKVK 292 (302)
Q Consensus 213 ~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 292 (302)
++|+||||++.+......+.|+|||+|+|.|+|++||+.+++++++.|+++|++++.++........++++.++.++.++
T Consensus 380 ~~F~PeR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (466)
T PLN02655 380 EEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLHAH 459 (466)
T ss_pred hccCccccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcEEE
Confidence 99999999976543344578999999999999999999999999999999999998765433333345667788899999
Q ss_pred EEEcc
Q psy4939 293 LTPRK 297 (302)
Q Consensus 293 ~~~R~ 297 (302)
+++|.
T Consensus 460 ~~~r~ 464 (466)
T PLN02655 460 LKPRG 464 (466)
T ss_pred EeecC
Confidence 99885
No 16
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=4.1e-48 Score=362.79 Aligned_cols=218 Identities=23% Similarity=0.393 Sum_probs=191.0
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC--CCCCChhh
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDS--DRPCTFQD 131 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~ 131 (302)
..|+++.+++...++..+++++|.+++.++++||+|||+++++|++++|++||++|+++++|++++.+.. +..+++++
T Consensus 243 ~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~ 322 (463)
T PLN02774 243 HTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWND 322 (463)
T ss_pred cccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHH
Confidence 3589999997544444699999999999999999999999999999999999999999999999997642 34578999
Q ss_pred ccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCC
Q psy4939 132 TLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPN 211 (302)
Q Consensus 132 ~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~ 211 (302)
+.++||++|||+|+||++|+++.+.|.+.+|++++ ||.||||+.|+++.+++||||++|+|
T Consensus 323 l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~-------------------g~~IpkGt~v~~~~~~~~rdp~~~~d 383 (463)
T PLN02774 323 YKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELN-------------------GYVIPKGWRIYVYTREINYDPFLYPD 383 (463)
T ss_pred HhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeEC-------------------CEEECCCCEEEEehHHhcCCcccCCC
Confidence 99999999999999999999998889999999998 89999999999999999999999999
Q ss_pred CCCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCeeE
Q psy4939 212 PDVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGFKV 291 (302)
Q Consensus 212 p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v 291 (302)
|++|+||||++.+.. ....|+|||+|+|.|+|++||++|++++++.|+++|++++.++.. .. ...++.|+++++|
T Consensus 384 P~~F~PeRfl~~~~~--~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~-~~--~~~~~~p~~g~~~ 458 (463)
T PLN02774 384 PMTFNPWRWLDKSLE--SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK-LM--KFPRVEAPNGLHI 458 (463)
T ss_pred hhccCchhcCCCCcC--CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc-cc--cCCCCCCCCCceE
Confidence 999999999975421 123589999999999999999999999999999999999976532 21 1223457889999
Q ss_pred EEEE
Q psy4939 292 KLTP 295 (302)
Q Consensus 292 ~~~~ 295 (302)
++++
T Consensus 459 ~~~~ 462 (463)
T PLN02774 459 RVSP 462 (463)
T ss_pred Eeee
Confidence 9874
No 17
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=4.5e-48 Score=367.03 Aligned_cols=223 Identities=25% Similarity=0.495 Sum_probs=191.3
Q ss_pred hhhHHHHHHHHhcC------------CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC
Q psy4939 54 RLAFLDLLIESAQN------------GVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFG 121 (302)
Q Consensus 54 ~~d~l~~ll~~~~~------------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~ 121 (302)
..|+++.+++.... +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus 271 ~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~ 350 (516)
T PLN02183 271 ETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVG 350 (516)
T ss_pred cccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence 35899999975321 225899999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCChhhccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccc
Q psy4939 122 DSDRPCTFQDTLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYK 201 (302)
Q Consensus 122 ~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~ 201 (302)
.. ..++.+++.++||++|||+|+||++|+++...|++.+|++++ ||.|||||.|.++.++
T Consensus 351 ~~-~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~-------------------g~~IPkGt~V~~~~~~ 410 (516)
T PLN02183 351 LN-RRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVA-------------------GYFIPKRSRVMINAWA 410 (516)
T ss_pred CC-CCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeEC-------------------CEEECCCCEEEEehhh
Confidence 43 467999999999999999999999999999889999999998 8999999999999999
Q ss_pred cccCCCCCCCCCCcCCCCCCCCccCC--CCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCc--Ccee
Q psy4939 202 IHRQPDTYPNPDVYNPDNFLPEKCAN--RHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLE--DWKL 277 (302)
Q Consensus 202 ~~~d~~~~~~p~~F~P~Rfl~~~~~~--~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~--~~~~ 277 (302)
+||||++|+||++|+||||++++... .+.+.|+|||.|+|+|+|++||++|++++++.|+++|+++..++.. ....
T Consensus 411 ~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~ 490 (516)
T PLN02183 411 IGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDM 490 (516)
T ss_pred hcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCCh
Confidence 99999999999999999999754321 2456899999999999999999999999999999999999866431 1222
Q ss_pred ec--ceeeecCCCeeEEEEEc
Q psy4939 278 QG--DIILKRTDGFKVKLTPR 296 (302)
Q Consensus 278 ~~--~~~~~~~~~~~v~~~~R 296 (302)
.. +.+..+..++.+.+++|
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~r 511 (516)
T PLN02183 491 NDVFGLTAPRATRLVAVPTYR 511 (516)
T ss_pred hhccccccccCCCcEEEeecC
Confidence 11 23333444677778888
No 18
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=5.1e-48 Score=364.01 Aligned_cols=219 Identities=28% Similarity=0.444 Sum_probs=188.2
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhhcc
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQDTL 133 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 133 (302)
..|+++.|++..........++|.+++..+++||+|||+++++|++++|++||++|+||++|+++++++. ..++++++.
T Consensus 262 ~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~~l~ 340 (482)
T PTZ00404 262 PRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGR-NKVLLSDRQ 340 (482)
T ss_pred cccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC-CCCCccccc
Confidence 4589999998643211223335889999999999999999999999999999999999999999998764 457899999
Q ss_pred CCHHHHHHHHHhhccCCCccc-ccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCCC
Q psy4939 134 EMKYMERCIMETLRMFPPVPV-IARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPNP 212 (302)
Q Consensus 134 ~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 212 (302)
+||||+|||+|+||++|+++. ++|.+.+|+++.+ |+.|||||.|.++.+++||||++|+||
T Consensus 341 ~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~------------------g~~Ip~Gt~V~~~~~a~hrdp~~~~dP 402 (482)
T PTZ00404 341 STPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGG------------------GHFIPKDAQILINYYSLGRNEKYFENP 402 (482)
T ss_pred cChHHHHHHHHHHHhcCCcccccceeccCCEEecC------------------CeEECCCCEEEeeHHHhhCCccccCCc
Confidence 999999999999999999997 6899999999932 899999999999999999999999999
Q ss_pred CCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcC-ceeecceeeecCCCeeE
Q psy4939 213 DVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLED-WKLQGDIILKRTDGFKV 291 (302)
Q Consensus 213 ~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~v 291 (302)
++|+||||++.. .+..|+|||.|+|+|+|++||++|++++++.|+++|+++..++.+. .......++. +.+++|
T Consensus 403 ~~F~PeRwl~~~----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v 477 (482)
T PTZ00404 403 EQFDPSRFLNPD----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKV 477 (482)
T ss_pred cccCccccCCCC----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCcee
Confidence 999999998642 4568999999999999999999999999999999999998654321 2222345555 668999
Q ss_pred EEEEc
Q psy4939 292 KLTPR 296 (302)
Q Consensus 292 ~~~~R 296 (302)
.+++|
T Consensus 478 ~~~~R 482 (482)
T PTZ00404 478 LLEKR 482 (482)
T ss_pred eeecC
Confidence 99987
No 19
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=5.5e-48 Score=365.27 Aligned_cols=223 Identities=23% Similarity=0.467 Sum_probs=190.9
Q ss_pred hhhHHHHHHHHhcCC---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChh
Q psy4939 54 RLAFLDLLIESAQNG---VVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQ 130 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~---~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 130 (302)
..|+++.|++..+++ ..+++++|.+++.++++||+|||+++++|++++|++||++|+++++|+++++++. ..++++
T Consensus 264 ~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~-~~~~~~ 342 (499)
T PLN03234 264 TESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK-GYVSEE 342 (499)
T ss_pred cccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCCCHH
Confidence 358999888764322 2589999999999999999999999999999999999999999999999998754 557999
Q ss_pred hccCCHHHHHHHHHhhccCCCcccc-cceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCC
Q psy4939 131 DTLEMKYMERCIMETLRMFPPVPVI-ARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTY 209 (302)
Q Consensus 131 ~~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~ 209 (302)
++.+|||++|||+|++|++|+++.. .|.+.+|++++ ||.|||||.|.++.+++||||++|
T Consensus 343 ~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~-------------------g~~IP~Gt~v~~~~~~~~rd~~~~ 403 (499)
T PLN03234 343 DIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIG-------------------GYDIPAKTIIQVNAWAVSRDTAAW 403 (499)
T ss_pred HHhcChHHHHHHHHHhccCCCccccCCcccCCCeeEC-------------------CEEECCCCEEEEehHhhhCCcccc
Confidence 9999999999999999999999985 69999999998 899999999999999999999999
Q ss_pred -CCCCCcCCCCCCCCccC---CCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCC--cCcee--ecce
Q psy4939 210 -PNPDVYNPDNFLPEKCA---NRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKL--EDWKL--QGDI 281 (302)
Q Consensus 210 -~~p~~F~P~Rfl~~~~~---~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~--~~~~~--~~~~ 281 (302)
+||++|+||||+++... ....+.|+|||.|+|+|+|+++|++|++++++.|+++|++++.++. ..+.. ..+.
T Consensus 404 ~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~ 483 (499)
T PLN03234 404 GDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGL 483 (499)
T ss_pred cCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccc
Confidence 89999999999975432 1246689999999999999999999999999999999999997652 23333 2344
Q ss_pred eeecCCCeeEEEEEc
Q psy4939 282 ILKRTDGFKVKLTPR 296 (302)
Q Consensus 282 ~~~~~~~~~v~~~~R 296 (302)
+..++..+.+..++|
T Consensus 484 ~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 484 AMHKKEHLVLAPTKH 498 (499)
T ss_pred ccccCCCeEEEeecC
Confidence 445666666665554
No 20
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=6.6e-48 Score=364.52 Aligned_cols=226 Identities=27% Similarity=0.500 Sum_probs=197.6
Q ss_pred hhhHHHHHHHHhc--CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhh
Q psy4939 54 RLAFLDLLIESAQ--NGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQD 131 (302)
Q Consensus 54 ~~d~l~~ll~~~~--~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 131 (302)
+.|+++.+++..+ ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.. ..+++++
T Consensus 266 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~ 344 (504)
T PLN00110 266 NPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRN-RRLVESD 344 (504)
T ss_pred CCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCCCHHH
Confidence 3589999997642 344699999999999999999999999999999999999999999999999998754 4589999
Q ss_pred ccCCHHHHHHHHHhhccCCCccc-ccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCC
Q psy4939 132 TLEMKYMERCIMETLRMFPPVPV-IARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYP 210 (302)
Q Consensus 132 ~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~ 210 (302)
+.+|||++|||+|+||++|+++. ++|.+.+|++++ ||.|||||.|.++.+++||||++|+
T Consensus 345 ~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~-------------------g~~Ip~Gt~V~~~~~~~h~d~~~~~ 405 (504)
T PLN00110 345 LPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVN-------------------GYYIPKNTRLSVNIWAIGRDPDVWE 405 (504)
T ss_pred hhcChHHHHHHHHHhcCCCCcccccccccCCCeeeC-------------------CEEECCCCEEEEeHHHhcCChhhcC
Confidence 99999999999999999999997 689999999987 8999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccCCC----CCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCce--eecceeee
Q psy4939 211 NPDVYNPDNFLPEKCANR----HYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWK--LQGDIILK 284 (302)
Q Consensus 211 ~p~~F~P~Rfl~~~~~~~----~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~ 284 (302)
||++|+||||+++..... +.+.|+|||.|+|.|+|++||++|++++++.|+++|++++.++. ... .....++.
T Consensus 406 dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~ 484 (504)
T PLN00110 406 NPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV-ELNMDEAFGLALQ 484 (504)
T ss_pred CcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC-ccCcccccccccc
Confidence 999999999996532211 23579999999999999999999999999999999999987653 222 22345667
Q ss_pred cCCCeeEEEEEccCCC
Q psy4939 285 RTDGFKVKLTPRKKQT 300 (302)
Q Consensus 285 ~~~~~~v~~~~R~~~~ 300 (302)
++.++.+++++|+.++
T Consensus 485 ~~~~~~~~~~~r~~~~ 500 (504)
T PLN00110 485 KAVPLSAMVTPRLHQS 500 (504)
T ss_pred cCCCceEeeccCCCch
Confidence 8889999999997543
No 21
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=3.7e-47 Score=360.95 Aligned_cols=224 Identities=25% Similarity=0.426 Sum_probs=193.7
Q ss_pred hhhHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhh
Q psy4939 54 RLAFLDLLIESAQNGV--VLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQD 131 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~--~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 131 (302)
..|+++.|++..++.+ .+++++|.+++..+++||+|||+++++|++++|+.||++|+++++||+++++.. ..++.++
T Consensus 291 ~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~-~~~~~~~ 369 (534)
T PLN03018 291 VEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKD-RLVQESD 369 (534)
T ss_pred cccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC-CCCCHHH
Confidence 3589999997654322 489999999999999999999999999999999999999999999999998754 5688999
Q ss_pred ccCCHHHHHHHHHhhccCCCcccc-cceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCC
Q psy4939 132 TLEMKYMERCIMETLRMFPPVPVI-ARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYP 210 (302)
Q Consensus 132 ~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~ 210 (302)
+.++||++|||+|+||++|+++.. .|.+.+|++++ ||.||||+.|+++.+++||||++|+
T Consensus 370 ~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~-------------------G~~IpkGt~V~~~~~~~~~dp~~~~ 430 (534)
T PLN03018 370 IPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLG-------------------GYFIPKGSHIHVCRPGLGRNPKIWK 430 (534)
T ss_pred hcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeEC-------------------CEEECCCCEEEEChHHhcCCcccCC
Confidence 999999999999999999999986 58899999998 8999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccCC------CCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeec-ceee
Q psy4939 211 NPDVYNPDNFLPEKCAN------RHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQG-DIIL 283 (302)
Q Consensus 211 ~p~~F~P~Rfl~~~~~~------~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~~~ 283 (302)
||++|+||||++.+... .....|+|||+|+|.|+|++||++|+++++++|+++|++++.++...+.... ..+.
T Consensus 431 ~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~ 510 (534)
T PLN03018 431 DPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASL 510 (534)
T ss_pred CccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccce
Confidence 99999999999754221 2456799999999999999999999999999999999999765432232211 1233
Q ss_pred ecCCCeeEEEEEcc
Q psy4939 284 KRTDGFKVKLTPRK 297 (302)
Q Consensus 284 ~~~~~~~v~~~~R~ 297 (302)
..+.++.|++++|.
T Consensus 511 ~~p~~~~v~~~~R~ 524 (534)
T PLN03018 511 LMAKPLLLSVEPRL 524 (534)
T ss_pred ecCCCeEEEEEecc
Confidence 34679999999994
No 22
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=4.2e-47 Score=355.01 Aligned_cols=217 Identities=20% Similarity=0.324 Sum_probs=193.2
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC---CCCCCCChh
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFG---DSDRPCTFQ 130 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~ 130 (302)
..|+++.+++.. +..+++++|..+++.+++||+|||+.+++|++++|++||++|+++++|++++.+ ..+..++.+
T Consensus 232 ~~d~l~~ll~~~--~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~ 309 (452)
T PLN03141 232 PKDVVDVLLRDG--SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWT 309 (452)
T ss_pred hhhHHHHHHhcC--CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHH
Confidence 358999998754 345899999999999999999999999999999999999999999999998763 223457899
Q ss_pred hccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCC
Q psy4939 131 DTLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYP 210 (302)
Q Consensus 131 ~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~ 210 (302)
++.++||++|||+|++|++|+++.++|.+.+|++++ ||.||||+.|+++.+++||||++|+
T Consensus 310 ~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~-------------------g~~IPkG~~V~~~~~~~~~d~~~~~ 370 (452)
T PLN03141 310 DYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIK-------------------GYLIPKGWCVLAYFRSVHLDEENYD 370 (452)
T ss_pred HHhccHHHHHHHHHHHhccCCcCCcceeecCCeeEC-------------------CEEECCCCEEEEehHhccCCchhcC
Confidence 999999999999999999999988899999999998 8999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCee
Q psy4939 211 NPDVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGFK 290 (302)
Q Consensus 211 ~p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (302)
||++|+||||++.+ ..++.|+|||+|+|.|+|++||++|++++++.|+++|++++.++. .. ...++.|..++.
T Consensus 371 dP~~F~PeRfl~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~--~~--~~~~~~~~~~~~ 443 (452)
T PLN03141 371 NPYQFNPWRWQEKD---MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT--IV--NFPTVRMKRKLP 443 (452)
T ss_pred CccccCcccccCCC---CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC--ee--ecccccCCCCce
Confidence 99999999999753 245689999999999999999999999999999999999986543 11 124677889999
Q ss_pred EEEEEccC
Q psy4939 291 VKLTPRKK 298 (302)
Q Consensus 291 v~~~~R~~ 298 (302)
|.+++|+.
T Consensus 444 ~~~~~~~~ 451 (452)
T PLN03141 444 IWVTRIDD 451 (452)
T ss_pred EEEEeCCC
Confidence 99999963
No 23
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=3.2e-47 Score=361.19 Aligned_cols=227 Identities=24% Similarity=0.450 Sum_probs=195.9
Q ss_pred hhhHHHHHHHHhcC-C-CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhh
Q psy4939 54 RLAFLDLLIESAQN-G-VVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQD 131 (302)
Q Consensus 54 ~~d~l~~ll~~~~~-~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 131 (302)
+.|+++.+++...+ + ..+++++|.+++..+++||+|||+++++|++++|++||++|++|++|++++++.. ..++.++
T Consensus 273 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~-~~~t~~~ 351 (514)
T PLN03112 273 DMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRN-RMVQESD 351 (514)
T ss_pred cchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCC-CcCChhh
Confidence 35899999986432 2 2489999999999999999999999999999999999999999999999998754 4589999
Q ss_pred ccCCHHHHHHHHHhhccCCCccc-ccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCC
Q psy4939 132 TLEMKYMERCIMETLRMFPPVPV-IARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYP 210 (302)
Q Consensus 132 ~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~ 210 (302)
+.+|||++|||+|++|++|+++. +.|.+.+|+.+. |+.|||||.|.++.+++||||++|+
T Consensus 352 l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~-------------------g~~IPkGt~v~~~~~~~h~d~~~~~ 412 (514)
T PLN03112 352 LVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTIN-------------------GYYIPAKTRVFINTHGLGRNTKIWD 412 (514)
T ss_pred hccCcHHHHHHHHHhccCCCcccccccccCCCeeEc-------------------CEEeCCCCEEEEehHHhhCCcccCC
Confidence 99999999999999999999997 579999999998 8999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccC-----CCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCC--cCceee--cce
Q psy4939 211 NPDVYNPDNFLPEKCA-----NRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKL--EDWKLQ--GDI 281 (302)
Q Consensus 211 ~p~~F~P~Rfl~~~~~-----~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~--~~~~~~--~~~ 281 (302)
||++|+||||++.... ....+.|+|||.|+|+|+|++||++|++++++.|+++|++++.++. .++... ...
T Consensus 413 dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~ 492 (514)
T PLN03112 413 DVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGM 492 (514)
T ss_pred ChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCc
Confidence 9999999998754211 1234679999999999999999999999999999999999987542 133332 234
Q ss_pred eeecCCCeeEEEEEccCCC
Q psy4939 282 ILKRTDGFKVKLTPRKKQT 300 (302)
Q Consensus 282 ~~~~~~~~~v~~~~R~~~~ 300 (302)
++.+++++.++++||...+
T Consensus 493 ~~~~~~~~~~~~~~r~~~~ 511 (514)
T PLN03112 493 TMPKAKPLRAVATPRLAPH 511 (514)
T ss_pred ccccCCCeEEEeecCCccc
Confidence 4556779999999997654
No 24
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=6.2e-47 Score=358.17 Aligned_cols=198 Identities=28% Similarity=0.509 Sum_probs=179.0
Q ss_pred hhHHHHHHHHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC-CCCCChh
Q psy4939 55 LAFLDLLIESAQN---GVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDS-DRPCTFQ 130 (302)
Q Consensus 55 ~d~l~~ll~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~ 130 (302)
.|+++.|++..++ +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.. ...++.+
T Consensus 266 ~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~ 345 (502)
T PLN02966 266 ESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTED 345 (502)
T ss_pred ccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHh
Confidence 4899999976533 23589999999999999999999999999999999999999999999999998643 2357899
Q ss_pred hccCCHHHHHHHHHhhccCCCccc-ccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCC
Q psy4939 131 DTLEMKYMERCIMETLRMFPPVPV-IARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTY 209 (302)
Q Consensus 131 ~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~ 209 (302)
++.+||||+|||+|+||++|+++. +.|.+.+|++++ ||.|||||.|.++.|++||||++|
T Consensus 346 dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~-------------------g~~IP~Gt~V~~~~~~~~rdp~~~ 406 (502)
T PLN02966 346 DVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIA-------------------GYDIPAGTTVNVNAWAVSRDEKEW 406 (502)
T ss_pred hccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEc-------------------cEEECCCCEEEEecccccCCcccc
Confidence 999999999999999999999998 579999999998 899999999999999999999999
Q ss_pred -CCCCCcCCCCCCCCccC-CCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCC
Q psy4939 210 -PNPDVYNPDNFLPEKCA-NRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTK 271 (302)
Q Consensus 210 -~~p~~F~P~Rfl~~~~~-~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~ 271 (302)
+||++|+||||++++.. ......|+|||.|+|+|+|++||++|++++++.|+++|++++.++
T Consensus 407 g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~ 470 (502)
T PLN02966 407 GPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNG 470 (502)
T ss_pred cCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCC
Confidence 99999999999975432 124568999999999999999999999999999999999998765
No 25
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=5.1e-47 Score=359.85 Aligned_cols=224 Identities=26% Similarity=0.505 Sum_probs=193.9
Q ss_pred hhhHHHHHHHHhcC------CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCC
Q psy4939 54 RLAFLDLLIESAQN------GVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPC 127 (302)
Q Consensus 54 ~~d~l~~ll~~~~~------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~ 127 (302)
+.|+++.|++..++ +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++.+.. ..+
T Consensus 270 ~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~ 348 (517)
T PLN02687 270 HKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD-RLV 348 (517)
T ss_pred cccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC-CCC
Confidence 45899999986432 34699999999999999999999999999999999999999999999999998654 567
Q ss_pred ChhhccCCHHHHHHHHHhhccCCCccc-ccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCC
Q psy4939 128 TFQDTLEMKYMERCIMETLRMFPPVPV-IARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQP 206 (302)
Q Consensus 128 ~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~ 206 (302)
+.+++.++|||+|||+|+||++|+++. +.|.+.+|+++. |+.||+||.|.++.+++||||
T Consensus 349 ~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~-------------------g~~ip~Gt~v~~~~~~~h~d~ 409 (517)
T PLN02687 349 SESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEIN-------------------GYHIPKGATLLVNVWAIARDP 409 (517)
T ss_pred CHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeEC-------------------CEEECCCCEEEEecHHhcCCc
Confidence 999999999999999999999999997 689999999998 899999999999999999999
Q ss_pred CCCCCCCCcCCCCCCCCccC-----CCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCc--Ccee--
Q psy4939 207 DTYPNPDVYNPDNFLPEKCA-----NRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLE--DWKL-- 277 (302)
Q Consensus 207 ~~~~~p~~F~P~Rfl~~~~~-----~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~--~~~~-- 277 (302)
++|+||++|+||||++.+.. ....+.|+|||.|+|.|+|++||++|++++++.|+++|++++.++.. .+..
T Consensus 410 ~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~ 489 (517)
T PLN02687 410 EQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEE 489 (517)
T ss_pred ccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCccc
Confidence 99999999999999975321 12456799999999999999999999999999999999999875432 2222
Q ss_pred ecceeeecCCCeeEEEEEcc
Q psy4939 278 QGDIILKRTDGFKVKLTPRK 297 (302)
Q Consensus 278 ~~~~~~~~~~~~~v~~~~R~ 297 (302)
.......+..++.+++++|.
T Consensus 490 ~~~~~~~~~~~~~~~~~~R~ 509 (517)
T PLN02687 490 AYGLTLQRAVPLMVHPRPRL 509 (517)
T ss_pred ccceeeecCCCeEEeeccCC
Confidence 22344455567888888885
No 26
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=1.6e-46 Score=352.04 Aligned_cols=221 Identities=19% Similarity=0.303 Sum_probs=196.0
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC--CCCCCChhh
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGD--SDRPCTFQD 131 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~--~~~~~~~~~ 131 (302)
..|+++.|++.. ..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++++.+. ....+++++
T Consensus 249 ~~d~l~~ll~~~---~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~ 325 (472)
T PLN02987 249 KKDMLAALLASD---DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSD 325 (472)
T ss_pred cccHHHHHHhcC---CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHH
Confidence 458999999763 258999999999999999999999999999999999999999999999998752 224578899
Q ss_pred ccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCC
Q psy4939 132 TLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPN 211 (302)
Q Consensus 132 ~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~ 211 (302)
+.++||++|+++|++|++|+++.+.|.+.+|++++ ||.||||+.|+++.+++|+||++|+|
T Consensus 326 l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~-------------------G~~ip~Gt~v~~~~~~~~~d~~~~~~ 386 (472)
T PLN02987 326 YKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVK-------------------GYTIPKGWKVFASFRAVHLDHEYFKD 386 (472)
T ss_pred HhcChHHHHHHHHHHHccCCcCCccccCCCCeeEC-------------------CEEECCCCEEEEehHHhhCCcccCCC
Confidence 99999999999999999999988889999999998 89999999999999999999999999
Q ss_pred CCCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCeeE
Q psy4939 212 PDVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGFKV 291 (302)
Q Consensus 212 p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v 291 (302)
|++|+||||++........+.|+|||.|+|.|+|++||++|++++++.|+++|++++.++. +... ..++.|.+++++
T Consensus 387 p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~p~~~~~~ 463 (472)
T PLN02987 387 ARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD-KLVF--FPTTRTQKRYPI 463 (472)
T ss_pred ccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC-ceee--cccccCCCCceE
Confidence 9999999999754333345679999999999999999999999999999999999987653 3322 347788889999
Q ss_pred EEEEccCC
Q psy4939 292 KLTPRKKQ 299 (302)
Q Consensus 292 ~~~~R~~~ 299 (302)
++++|.-.
T Consensus 464 ~~~~r~~~ 471 (472)
T PLN02987 464 NVKRRDVA 471 (472)
T ss_pred EEEecccC
Confidence 99999654
No 27
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=4.1e-46 Score=351.76 Aligned_cols=220 Identities=26% Similarity=0.414 Sum_probs=194.7
Q ss_pred hhhHHHHHHHHhc-CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC---CCCCCh
Q psy4939 54 RLAFLDLLIESAQ-NGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDS---DRPCTF 129 (302)
Q Consensus 54 ~~d~l~~ll~~~~-~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~---~~~~~~ 129 (302)
..|+++.+++..+ ++..+++++|.++++.+++||+|||+++++|++++|++||++|+|+++|++++.+.. ...+++
T Consensus 265 ~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~ 344 (490)
T PLN02302 265 KKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTL 344 (490)
T ss_pred cCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 4589999998653 344699999999999999999999999999999999999999999999999987642 123789
Q ss_pred hhccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCC
Q psy4939 130 QDTLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTY 209 (302)
Q Consensus 130 ~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~ 209 (302)
+++.++|||+|+|+|++|++|+++...|.+.+|++++ ||.||||+.|.++.+++||||++|
T Consensus 345 ~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~-------------------g~~Ip~Gt~v~~~~~~~~rd~~~~ 405 (490)
T PLN02302 345 KDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVN-------------------GYTIPKGWKVLAWFRQVHMDPEVY 405 (490)
T ss_pred HHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeEC-------------------CEEECCCCEEEeeHHHhcCCcccC
Confidence 9999999999999999999999998889999999998 899999999999999999999999
Q ss_pred CCCCCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCe
Q psy4939 210 PNPDVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGF 289 (302)
Q Consensus 210 ~~p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (302)
+||++|+||||++.. ..+..|+|||.|+|.|+|++||.+|++++++.|+++|++++.++...+. ....+.|.+++
T Consensus 406 ~dP~~F~PeR~~~~~---~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~p~~~~ 480 (490)
T PLN02302 406 PNPKEFDPSRWDNYT---PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGCKVM--YLPHPRPKDNC 480 (490)
T ss_pred CCccccChhhcCCCC---CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCCcce--eCCCCCCCCCc
Confidence 999999999999643 2456789999999999999999999999999999999999876533333 23347788899
Q ss_pred eEEEEEcc
Q psy4939 290 KVKLTPRK 297 (302)
Q Consensus 290 ~v~~~~R~ 297 (302)
.+++++|.
T Consensus 481 ~~~~~~~~ 488 (490)
T PLN02302 481 LARITKVA 488 (490)
T ss_pred eEEEEecc
Confidence 99999885
No 28
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=1.1e-45 Score=348.54 Aligned_cols=220 Identities=26% Similarity=0.570 Sum_probs=189.9
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhhcc
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQDTL 133 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 133 (302)
+.|+++.|+...+ .+++++|.++++.+++||+|||+++++|++++|++||++|+++++|++++++. ..++++++.
T Consensus 260 ~~d~l~~ll~~~~---~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~--~~~~~~~~~ 334 (489)
T PLN02936 260 DPSVLRFLLASRE---EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG--RPPTYEDIK 334 (489)
T ss_pred chHHHHHHHhccc---cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC--CCCCHHHHh
Confidence 4589999986532 48999999999999999999999999999999999999999999999999874 347899999
Q ss_pred CCHHHHHHHHHhhccCCCccccccee-ccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCCC
Q psy4939 134 EMKYMERCIMETLRMFPPVPVIAREL-QQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPNP 212 (302)
Q Consensus 134 ~l~~l~a~i~E~lRl~p~~~~~~R~~-~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 212 (302)
+||||+|||+|+||++|+++...|++ ..|+.+. |+.||+|+.|+++.+++||||++|+||
T Consensus 335 ~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~-------------------g~~Ip~Gt~v~~~~~~~~rd~~~~~dP 395 (489)
T PLN02936 335 ELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPG-------------------GYKVNAGQDIMISVYNIHRSPEVWERA 395 (489)
T ss_pred hCHHHHHHHHHhhhcCCCcccccceeccCccccC-------------------CeEECCCCEEEecHHhccCChhhCCCc
Confidence 99999999999999999998866555 4555444 899999999999999999999999999
Q ss_pred CCcCCCCCCCCccC---CCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCe
Q psy4939 213 DVYNPDNFLPEKCA---NRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGF 289 (302)
Q Consensus 213 ~~F~P~Rfl~~~~~---~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (302)
++|+||||+..+.. ...+..|+|||.|+|.|+|++||++|++++++.|+++|+++++++. ++......+..++.++
T Consensus 396 ~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~ 474 (489)
T PLN02936 396 EEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ-DIVMTTGATIHTTNGL 474 (489)
T ss_pred cccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC-ccceecceEEeeCCCe
Confidence 99999999964321 1234579999999999999999999999999999999999987653 3333344566678899
Q ss_pred eEEEEEccC
Q psy4939 290 KVKLTPRKK 298 (302)
Q Consensus 290 ~v~~~~R~~ 298 (302)
+|++++|..
T Consensus 475 ~v~~~~R~~ 483 (489)
T PLN02936 475 YMTVSRRRV 483 (489)
T ss_pred EEEEEeeeC
Confidence 999999954
No 29
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=1.1e-45 Score=346.39 Aligned_cols=215 Identities=24% Similarity=0.385 Sum_probs=190.8
Q ss_pred hhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC--CCCCChhh
Q psy4939 54 RLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDS--DRPCTFQD 131 (302)
Q Consensus 54 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~ 131 (302)
+.|+++.+++. +..++++++.++++++++||+|||+++++|++++|++||++|+++++|++++.+.. ...+++++
T Consensus 246 ~~d~l~~ll~~---~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~ 322 (463)
T PLN02196 246 HNDLLGSFMGD---KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWED 322 (463)
T ss_pred cccHHHHHHhc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHH
Confidence 35788888753 34589999999999999999999999999999999999999999999999987642 35688999
Q ss_pred ccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCC
Q psy4939 132 TLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPN 211 (302)
Q Consensus 132 ~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~ 211 (302)
+.++||++|+|+|+||++|+++...|.+.+|+.++ ||.||||+.|+++.+++||||++|+|
T Consensus 323 ~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~-------------------g~~IpkGt~v~~~~~~~~rd~~~~~d 383 (463)
T PLN02196 323 TKKMPLTSRVIQETLRVASILSFTFREAVEDVEYE-------------------GYLIPKGWKVLPLFRNIHHSADIFSD 383 (463)
T ss_pred HhcChHHHHHHHHHHhcCCCccccceeeccccccC-------------------CEEeCCCCEEEeeHHHhcCCchhcCC
Confidence 99999999999999999999999889999999987 89999999999999999999999999
Q ss_pred CCCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCeeE
Q psy4939 212 PDVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGFKV 291 (302)
Q Consensus 212 p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v 291 (302)
|++|+||||++.. .+..|+|||.|+|.|+|+++|++|++++++.|+++|++++.+++.++ ....+..|+++++|
T Consensus 384 P~~F~PeRfl~~~----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~p~~~~~~ 457 (463)
T PLN02196 384 PGKFDPSRFEVAP----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNGI--QYGPFALPQNGLPI 457 (463)
T ss_pred cCccChhhhcCCC----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCce--EEcccccCCCCceE
Confidence 9999999999632 35679999999999999999999999999999999999987654333 33445668889999
Q ss_pred EEEEc
Q psy4939 292 KLTPR 296 (302)
Q Consensus 292 ~~~~R 296 (302)
+++.+
T Consensus 458 ~~~~~ 462 (463)
T PLN02196 458 ALSRK 462 (463)
T ss_pred EEecC
Confidence 98754
No 30
>KOG0684|consensus
Probab=100.00 E-value=3e-45 Score=324.05 Aligned_cols=230 Identities=25% Similarity=0.545 Sum_probs=205.0
Q ss_pred hhhhhHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChhh
Q psy4939 52 KKRLAFLDLLIESAQNGVVLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQD 131 (302)
Q Consensus 52 ~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 131 (302)
+...|+++.+++...++...+++|+.+.++.+++||..||+.+..|++++|++||++++.+++|+.+++++....++++.
T Consensus 250 ~~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~ 329 (486)
T KOG0684|consen 250 KWDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQ 329 (486)
T ss_pred cccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHH
Confidence 34558999999855678889999999999999999999999999999999999999999999999999988877799999
Q ss_pred ccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCC
Q psy4939 132 TLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPN 211 (302)
Q Consensus 132 ~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~ 211 (302)
++++|.|++||+|||||+||.+.+.|.+.+|.++.+.|- .|.||+|..|.++++.+|+||++|+|
T Consensus 330 L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~---------------~Y~Ip~G~~valsP~~~hr~peif~d 394 (486)
T KOG0684|consen 330 LKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDG---------------EYVIPKGDIVALSPFLLHRDPEIFPD 394 (486)
T ss_pred HhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCc---------------ceecCCCCEEEeccccccCCccccCC
Confidence 999999999999999999999999999999999985431 59999999999999999999999999
Q ss_pred CCCcCCCCCCCCccCC---CC--CccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCC-CcCceeecceeeec
Q psy4939 212 PDVYNPDNFLPEKCAN---RH--YYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTK-LEDWKLQGDIILKR 285 (302)
Q Consensus 212 p~~F~P~Rfl~~~~~~---~~--~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~ 285 (302)
|+.|+|+||+++++.. .. .+.|+|||+|.|.|||+.||.+|++.++..+|+.|++++.++ .++++.. ..+..|
T Consensus 395 p~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s-~~v~~P 473 (486)
T KOG0684|consen 395 PEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYS-RMVMQP 473 (486)
T ss_pred hhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHH-HhhcCC
Confidence 9999999999776544 12 244699999999999999999999999999999999999884 3344433 347778
Q ss_pred CCCeeEEEEEcc
Q psy4939 286 TDGFKVKLTPRK 297 (302)
Q Consensus 286 ~~~~~v~~~~R~ 297 (302)
..+++++.+.|.
T Consensus 474 ~g~v~irYK~R~ 485 (486)
T KOG0684|consen 474 EGDVRIRYKRRP 485 (486)
T ss_pred CCCceEEEeecC
Confidence 889999999885
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-41 Score=313.93 Aligned_cols=198 Identities=32% Similarity=0.588 Sum_probs=173.3
Q ss_pred hhhhhHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCCCChh
Q psy4939 52 KKRLAFLDLLIESAQNGV-VLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIFGDSDRPCTFQ 130 (302)
Q Consensus 52 ~~~~d~l~~ll~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 130 (302)
..+.|+++.|+...++++ .+|++||.++++++++||+|||+++|+|+++.|++||++++++++|.+.
T Consensus 212 ~~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~------------ 279 (411)
T COG2124 212 APRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR------------ 279 (411)
T ss_pred CCcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch------------
Confidence 356799999999887766 5999999999999999999999999999999999999999999998764
Q ss_pred hccCCHHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCC
Q psy4939 131 DTLEMKYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYP 210 (302)
Q Consensus 131 ~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~ 210 (302)
||+.++|+|+||++|+++.+.|.+++|++++ |+.||||+.|+++.+++||||++|+
T Consensus 280 -----~~~~~~v~E~LR~~ppv~~~~R~~~~d~~ig-------------------g~~Ip~G~~V~~~~~~anrDp~~f~ 335 (411)
T COG2124 280 -----PLLEAVVEETLRLYPPVPLARRVATEDVELG-------------------GYRIPAGTVVLLSIGAANRDPEVFP 335 (411)
T ss_pred -----HHHHHHHHHHHHhCCchhccceeccCCEeeC-------------------CEEeCCCCEEEecHhhhcCChhhCC
Confidence 7889999999999999999889999999998 8999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccCCCCCccccCCCCCCCCChhHHHHHHHHHHHHHHHHhhceEeCCCCCcCceeecceeeecCCCee
Q psy4939 211 NPDVYNPDNFLPEKCANRHYYSFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFTVHSPTKLEDWKLQGDIILKRTDGFK 290 (302)
Q Consensus 211 ~p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (302)
+|++|||+||. +.|+|||+|+|.|+|..||++|++++|+.|+++|++....+ . .......+..+.....
T Consensus 336 ~P~~F~p~R~~---------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~~~~~~~~~~~~g~~~ 404 (411)
T COG2124 336 DPDEFDPERFN---------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P-PPLVRRPTLVPRGGER 404 (411)
T ss_pred ChhhcCCCCCC---------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-CCccccccccCCCcce
Confidence 99999999997 56799999999999999999999999999999999877655 2 1122223344444555
Q ss_pred EEEEEc
Q psy4939 291 VKLTPR 296 (302)
Q Consensus 291 v~~~~R 296 (302)
+.++.|
T Consensus 405 l~v~~~ 410 (411)
T COG2124 405 LPVRRR 410 (411)
T ss_pred eeeecC
Confidence 655544
No 32
>PLN02648 allene oxide synthase
Probab=100.00 E-value=8.1e-39 Score=299.03 Aligned_cols=195 Identities=17% Similarity=0.326 Sum_probs=163.9
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHH-HHHhcchhHHHHHHHHHHHHhcChH-HHHHHHHHHHHHhCCCCCCCChhhccCCHH
Q psy4939 60 LLIESAQNGVVLTDEEIKEQVDT-IMFEGHDTTAAGSSFFLCVMGTHPE-IQAKVIQEIDEIFGDSDRPCTFQDTLEMKY 137 (302)
Q Consensus 60 ~ll~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~~~~l~~~p~-~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~ 137 (302)
.+++..+. ..++++++.++++. +.+++++|++++++|++++|++||+ ++++|++|++.+.+..+..++.+++.+|||
T Consensus 257 ~ll~~~~~-~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~y 335 (480)
T PLN02648 257 EALDLAEK-FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPL 335 (480)
T ss_pred HHHHHHHh-cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHH
Confidence 55544433 24999999998875 4467788888899999999999995 999999999999864345689999999999
Q ss_pred HHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEEcccccccCCCCCCCCCCcCC
Q psy4939 138 MERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVIGTYKIHRQPDTYPNPDVYNP 217 (302)
Q Consensus 138 l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P 217 (302)
+++||+|+||++|+++...|++.+|+++.+. +.||.||||+.|+++.+.+||||++|+||++|||
T Consensus 336 l~avi~EtLRl~p~v~~~~r~a~~d~~l~~~---------------~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~P 400 (480)
T PLN02648 336 VKSVVYEALRIEPPVPFQYGRAREDFVIESH---------------DAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVP 400 (480)
T ss_pred HHHHHHHHHhhcCCcccccceecCCEEEecC---------------CceEEECCCCEEEEChHHHhCCcccCCCcceeCC
Confidence 9999999999999999999999999999731 1179999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCccccCC---------CCCCCCChhHHHHHHHHHHHHHHHHhhce-EeCCCCC
Q psy4939 218 DNFLPEKCANRHYYSFVPF---------SAGPRSCVGRKYAMLKLKVILSTILRNFT-VHSPTKL 272 (302)
Q Consensus 218 ~Rfl~~~~~~~~~~~~~~F---------g~G~r~C~G~~lA~~~~~~~l~~ll~~f~-~~~~~~~ 272 (302)
+||++++.. ....+++| |+|+|.|+|++||++|++++++.|+++|+ |++.++.
T Consensus 401 eRf~~~~~~--~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~ 463 (480)
T PLN02648 401 DRFMGEEGE--KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT 463 (480)
T ss_pred CCCCCCCcc--ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence 999864322 11233444 67789999999999999999999999998 9886653
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=63.56 E-value=4.7 Score=26.25 Aligned_cols=9 Identities=33% Similarity=1.180 Sum_probs=6.8
Q ss_pred CCCCCCCCc
Q psy4939 216 NPDNFLPEK 224 (302)
Q Consensus 216 ~P~Rfl~~~ 224 (302)
||||||...
T Consensus 44 DPERWLP~~ 52 (59)
T PF08492_consen 44 DPERWLPKR 52 (59)
T ss_pred CccccCchh
Confidence 789998643
No 34
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=44.99 E-value=21 Score=23.08 Aligned_cols=19 Identities=16% Similarity=0.233 Sum_probs=16.1
Q ss_pred HHHHHHhcChHHHHHHHHH
Q psy4939 97 FFLCVMGTHPEIQAKVIQE 115 (302)
Q Consensus 97 ~~~~~l~~~p~~~~~l~~E 115 (302)
-++.||.+||++.++|.+.
T Consensus 4 ~iV~YLv~nPevl~kl~~g 22 (57)
T PF05952_consen 4 EIVNYLVQNPEVLEKLKEG 22 (57)
T ss_pred HHHHHHHHChHHHHHHHcC
Confidence 3678999999999999863
No 35
>PF12554 MOZART1: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR022214 This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important.
Probab=42.76 E-value=82 Score=19.55 Aligned_cols=42 Identities=26% Similarity=0.488 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHH
Q psy4939 75 EIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEI 116 (302)
Q Consensus 75 ~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei 116 (302)
++...+..++-.|.+..+-.+.-.+.+..-||+....+-.|+
T Consensus 6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el 47 (48)
T PF12554_consen 6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL 47 (48)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence 455566777778888888888888888888999888777665
No 36
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=38.86 E-value=1.3e+02 Score=20.93 Aligned_cols=51 Identities=12% Similarity=0.078 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcChHHHHHHHHHHHHHh
Q psy4939 70 VLTDEEIKEQVDTIMFEGHDTTAAGSSFFLCVMGTHPEIQAKVIQEIDEIF 120 (302)
Q Consensus 70 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~ 120 (302)
..+.+.........++--+..++..+.-.+.+.++||+..+++.+.+..-+
T Consensus 28 ~~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 28 QDSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 355666777788889999999999999999999999999999888876654
No 37
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=38.15 E-value=13 Score=30.86 Aligned_cols=42 Identities=10% Similarity=0.160 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhccCCCcccccceeccceeecCCCCCCCCCcccccccCCCCeEeCCCCEEEE
Q psy4939 136 KYMERCIMETLRMFPPVPVIARELQQEVKLNSCDLTIPANCTQEVKLNSCDLTIPANCTVVI 197 (302)
Q Consensus 136 ~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~~~~~~~p~~~~~~~~~~~~g~~ip~G~~v~~ 197 (302)
..+.|||.|+.-+.... .+--+..+|+.++ |..|||||.+.-
T Consensus 53 n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~-------------------g~~IPkgt~l~G 94 (200)
T PF12508_consen 53 NTIRAVVDGTQTVVDGS-RVRLRLLEDIQIG-------------------GILIPKGTYLYG 94 (200)
T ss_pred CeEEEEEecceEEeCCC-EEEEEEcCceEEC-------------------CEEeCCCCEEEE
Confidence 34578888887665332 3333457788887 899999988764
No 38
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=32.67 E-value=40 Score=26.02 Aligned_cols=23 Identities=17% Similarity=0.652 Sum_probs=17.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHhh
Q psy4939 241 RSCVGRKYAMLKLKVILSTILRN 263 (302)
Q Consensus 241 r~C~G~~lA~~~~~~~l~~ll~~ 263 (302)
-.|.|+.||...+-.++..|+..
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS
T ss_pred ecccchHHHHHHHHHHHHHHhcC
Confidence 46999999999999999999874
No 39
>KOG3506|consensus
Probab=26.64 E-value=31 Score=21.93 Aligned_cols=10 Identities=50% Similarity=0.999 Sum_probs=8.8
Q ss_pred cCCCCCCCCC
Q psy4939 234 VPFSAGPRSC 243 (302)
Q Consensus 234 ~~Fg~G~r~C 243 (302)
-+||-|.|.|
T Consensus 12 ~kfg~GsrsC 21 (56)
T KOG3506|consen 12 RKFGQGSRSC 21 (56)
T ss_pred cccCCCCcce
Confidence 4799999998
No 40
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=20.84 E-value=29 Score=32.14 Aligned_cols=12 Identities=33% Similarity=0.445 Sum_probs=9.5
Q ss_pred CeEeCCCCEEEE
Q psy4939 186 DLTIPANCTVVI 197 (302)
Q Consensus 186 g~~ip~G~~v~~ 197 (302)
|..||+||.|.-
T Consensus 286 ~~~ipkgt~l~g 297 (410)
T TIGR03779 286 DLVIPKGTVLYG 297 (410)
T ss_pred CEEecCCCEEEE
Confidence 788999987664
No 41
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=20.46 E-value=1.6e+02 Score=20.94 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHH
Q psy4939 92 AAGSSFFLCVMGTHPEIQAKVIQEIDEI 119 (302)
Q Consensus 92 ~~~l~~~~~~l~~~p~~~~~l~~Ei~~~ 119 (302)
..++.|.++..-..|+..+.|++||.++
T Consensus 53 l~~lgy~v~tFnDcpeA~~eL~~eI~eA 80 (91)
T PF08285_consen 53 LFTLGYGVATFNDCPEAAKELQKEIKEA 80 (91)
T ss_pred HHHHHHhhhccCCCHHHHHHHHHHHHHH
Confidence 3466778888888899999999999887
Done!