BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4949
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y048|DTN1_CAEEL Dystrobrevin-1 OS=Caenorhabditis elegans GN=dyb-1 PE=1 SV=1
Length = 590
Score = 287 bits (735), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 179/250 (71%), Gaps = 4/250 (1%)
Query: 1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
H +DIWN+IEAFRENGLNA+ L + + +R E LL++++HNLNKRL SQ V +V L
Sbjct: 72 HLVDIWNMIEAFRENGLNALPLHTVIKTSRAELLLTTVFHNLNKRLVASQHVDTDVSISL 131
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
LL +LL AY ++ GR+ VFSIKVALAT+C+GKL+DKLRYIFSQ+ D NG + KF ++
Sbjct: 132 LLAFLLGAYDKQNTGRLTVFSIKVALATLCAGKLVDKLRYIFSQIADSNGLMDHIKFTDF 191
Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
LQ +L++ AV E+P+F +++ + F + KV++N F+DT +S+P P C++WLPLLHR
Sbjct: 192 LQQILSLTTAVFEAPTFGFSENAVNQCFHKDEKVSLNVFLDTFLSDPCPPCIMWLPLLHR 251
Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE-- 238
+ +V + HP+ CDAC +F GFRY+C +C N+Q+CQ CFW GR S H+ EHE+KE
Sbjct: 252 MASVSNVYHPVVCDACQVRSFTGFRYKCQRCANYQLCQSCFWRGRTSQNHSNEHEMKEYS 311
Query: 239 --NHPVNKLV 246
P +LV
Sbjct: 312 SYKSPTKQLV 321
>sp|O60941|DTNB_HUMAN Dystrobrevin beta OS=Homo sapiens GN=DTNB PE=1 SV=1
Length = 627
Score = 286 bits (732), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 178/249 (71%), Gaps = 4/249 (1%)
Query: 1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
H +DIWN+IEAFR+NGLN ++ +++SV+R ET++SS+Y+ LNKRLP + Q+ VE L
Sbjct: 51 HLVDIWNMIEAFRDNGLNTLDHTTEISVSRLETVISSIYYQLNKRLPSTHQISVEQSISL 110
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
LLN++++AY E G++ VFS+K LATMC GK++DKLRY+FSQ+ D NG ++ KF+++
Sbjct: 111 LLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRYVFSQMSDSNGLMIFSKFDQF 170
Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
L++VL +P AV E PSF YT+ + F K+ +N F+DTMM++P P CL+WLPL+HR
Sbjct: 171 LKEVLKLPTAVFEGPSFGYTEHSVRTCFPQQRKIMLNMFLDTMMADPPPQCLVWLPLMHR 230
Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN- 239
L VE+ HP+ C C + +GFRYRC +C N+Q+CQ CFW G G H+ +H++KE+
Sbjct: 231 LAHVENVFHPVECSYCRCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPHSNQHQMKEHS 290
Query: 240 ---HPVNKL 245
P KL
Sbjct: 291 SWKSPAKKL 299
>sp|O70585|DTNB_MOUSE Dystrobrevin beta OS=Mus musculus GN=Dtnb PE=1 SV=3
Length = 659
Score = 285 bits (728), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 177/249 (71%), Gaps = 4/249 (1%)
Query: 1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
H +DIWN+IEAFR+NGLN ++ +++SV+R ET++SS+Y+ LNKRLP + Q+ VE L
Sbjct: 51 HLVDIWNMIEAFRDNGLNTLDHSTEISVSRLETVISSIYYQLNKRLPSTHQISVEQSISL 110
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
LLN++++AY E G++ VFS+K LATMC GK++DKLRYIFSQ+ D NG ++ K +++
Sbjct: 111 LLNFMVAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRYIFSQMSDSNGLMMFGKLDQF 170
Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
L++ L +P AV E PSF YT+ + F K+ +N F+DTMM++P P CL+WLPL+HR
Sbjct: 171 LKEALKLPTAVFEGPSFGYTEHAVRTCFPQQKKIMLNMFLDTMMADPPPQCLVWLPLMHR 230
Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN- 239
L VE+ HP+ C C + +GFRYRC +C N+Q+CQ CFW G SG H+ +H++KE+
Sbjct: 231 LAHVENVFHPVECSYCHCESMMGFRYRCQQCHNYQLCQNCFWRGHASGAHSNQHQMKEHS 290
Query: 240 ---HPVNKL 245
P KL
Sbjct: 291 SWKSPAKKL 299
>sp|P84060|DTNB_RAT Dystrobrevin beta OS=Rattus norvegicus GN=Dtnb PE=2 SV=2
Length = 654
Score = 283 bits (724), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 173/238 (72%)
Query: 1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
H +DIWN+IEAFR+NGLN ++ +++SV+R ET++SS+Y+ LNKRLP + Q++VE L
Sbjct: 51 HLVDIWNMIEAFRDNGLNTLDHATEISVSRLETVISSIYYQLNKRLPSTHQINVEQSISL 110
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
LLN++++AY E G++ VFS+K LATMC GK++DKLRYIFSQ+ D NG ++ K +++
Sbjct: 111 LLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRYIFSQMSDSNGLMMFGKLDQF 170
Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
L++ L +P AV E PSF YT+ + F K+ +N F+DTMM++P P CL+WLPL+HR
Sbjct: 171 LKEALKLPTAVFEGPSFGYTEHAVRTCFPQQKKIMLNMFLDTMMADPPPQCLVWLPLMHR 230
Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
L VE+ HP+ C C + +GFRYRC +C N+Q+CQ CFW G G H+ +H++KE
Sbjct: 231 LAHVENVFHPVECSYCHCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPHSNQHQMKE 288
>sp|Q9Y4J8|DTNA_HUMAN Dystrobrevin alpha OS=Homo sapiens GN=DTNA PE=1 SV=2
Length = 743
Score = 273 bits (697), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 186/268 (69%), Gaps = 6/268 (2%)
Query: 1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
H +DIWNVIEA REN LN ++ ++++V+R E +LS++++ LNKR+P + Q+HVE L
Sbjct: 51 HLVDIWNVIEALRENALNNLDPNTELNVSRLEAVLSTIFYQLNKRMPTTHQIHVEQSISL 110
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
LLN+LL+A+ E G+I VF++K+ALAT+C GK+MDKLRYIFS + D +G +V +++++
Sbjct: 111 LLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQF 170
Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
L++VL +P AV E PSF YT+ A+ FS KVT+N F+DT+MS+P P CL+WLPLLHR
Sbjct: 171 LREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHR 230
Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE-- 238
L VE+ HP+ C C + +GFRYRC +C N+Q+CQ+CFW G G H+ +H++KE
Sbjct: 231 LANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYT 290
Query: 239 --NHPVNKLVTRYANHF--AVFRKKLKP 262
P KL + A R+ L P
Sbjct: 291 SWKSPAKKLTNALSKSLSCASSREPLHP 318
>sp|Q9D2N4|DTNA_MOUSE Dystrobrevin alpha OS=Mus musculus GN=Dtna PE=1 SV=2
Length = 746
Score = 273 bits (697), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 185/268 (69%), Gaps = 6/268 (2%)
Query: 1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
H +DIWNVIEA REN LN ++ +++VAR E +LS++++ LNKR+P + Q+HVE L
Sbjct: 51 HLVDIWNVIEALRENALNNLDPNIELNVARLEAVLSTIFYQLNKRMPTTHQIHVEQSISL 110
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
LLN+LL+A+ E G+I VF++K+ALAT+C GK+MDKLRYIFS + D +G +V +++++
Sbjct: 111 LLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQF 170
Query: 121 LQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHR 180
L++VL +P AV E PSF YT+ A+ FS KVT+N F+DT+MS+P P CL+WLPLLHR
Sbjct: 171 LREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHR 230
Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE-- 238
L VE+ HP+ C C + +GFRYRC +C N+Q+CQ+CFW G G H+ +H++KE
Sbjct: 231 LANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYT 290
Query: 239 --NHPVNKLVTRYANHF--AVFRKKLKP 262
P KL + A R+ L P
Sbjct: 291 SWKSPAKKLTNALSKSLSCASSREPLHP 318
>sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/F/G/H OS=Drosophila melanogaster GN=Dys PE=1
SV=3
Length = 3598
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 28/252 (11%)
Query: 3 IDIWNVIEAFRENGLNAIELQSD--VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
I + E+F +GL A Q+D + + T+L SLY ++K + + ++ L
Sbjct: 2918 ISMSTACESFDRHGLRA---QNDKLIDIPDMTTVLHSLYVTIDK-------IDLTLMLDL 2967
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
+NW+L+ Y + G+IRV S KV L +C G L +K RY+F + D + +
Sbjct: 2968 AINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLL 3027
Query: 121 LQDVLAIPAAVLESPSFSYTDT------------LAQEIFSGNGKVTV--NDFMDTMMSE 166
L D + +P + E +F ++ ++QE GN +++ F+ + E
Sbjct: 3028 LHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHE 3087
Query: 167 PGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRV 226
P L+WLP+LHRL A E+ H C+ C VGFRYRC KC NF MCQ+CF++GR
Sbjct: 3088 P--QSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRN 3145
Query: 227 SGGHNLEHEVKE 238
+ H L H + E
Sbjct: 3146 AKNHKLTHPMHE 3157
>sp|Q7YU29|DMDE_DROME Dystrophin, isoform E OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1051
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 28/252 (11%)
Query: 3 IDIWNVIEAFRENGLNAIELQSD--VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
I + E+F +GL A Q+D + + T+L SLY ++K + + ++ L
Sbjct: 472 ISMSTACESFDRHGLRA---QNDKLIDIPDMTTVLHSLYVTIDK-------IDLTLMLDL 521
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
+NW+L+ Y + G+IRV S KV L +C G L +K RY+F + D + +
Sbjct: 522 AINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLL 581
Query: 121 LQDVLAIPAAVLESPSFSYTDT------------LAQEIFSGNGKVTV--NDFMDTMMSE 166
L D + +P + E +F ++ ++QE GN +++ F+ + E
Sbjct: 582 LHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHE 641
Query: 167 PGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRV 226
P L+WLP+LHRL A E+ H C+ C VGFRYRC KC NF MCQ+CF++GR
Sbjct: 642 P--QSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRN 699
Query: 227 SGGHNLEHEVKE 238
+ H L H + E
Sbjct: 700 AKNHKLTHPMHE 711
>sp|Q9VDW3|DMDB_DROME Dystrophin, isoform B OS=Drosophila melanogaster GN=Dys PE=1 SV=3
Length = 1669
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 28/252 (11%)
Query: 3 IDIWNVIEAFRENGLNAIELQSD--VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
I + E+F +GL A Q+D + + T+L SLY ++K + + ++ L
Sbjct: 1090 ISMSTACESFDRHGLRA---QNDKLIDIPDMTTVLHSLYVTIDK-------IDLTLMLDL 1139
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
+NW+L+ Y + G+IRV S KV L +C G L +K RY+F + D + +
Sbjct: 1140 AINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLL 1199
Query: 121 LQDVLAIPAAVLESPSFSYTDT------------LAQEIFSGNGKVTV--NDFMDTMMSE 166
L D + +P + E +F ++ ++QE GN +++ F+ + E
Sbjct: 1200 LHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHE 1259
Query: 167 PGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRV 226
P L+WLP+LHRL A E+ H C+ C VGFRYRC KC NF MCQ+CF++GR
Sbjct: 1260 P--QSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRN 1317
Query: 227 SGGHNLEHEVKE 238
+ H L H + E
Sbjct: 1318 AKNHKLTHPMHE 1329
>sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1854
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 28/252 (11%)
Query: 3 IDIWNVIEAFRENGLNAIELQSD--VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
I + E+F +GL A Q+D + + T+L SLY ++K + + ++ L
Sbjct: 1275 ISMSTACESFDRHGLRA---QNDKLIDIPDMTTVLHSLYVTIDK-------IDLTLMLDL 1324
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
+NW+L+ Y + G+IRV S KV L +C G L +K RY+F + D + +
Sbjct: 1325 AINWILNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLVADTDRRADQRRLGLL 1384
Query: 121 LQDVLAIPAAVLESPSFSYTDT------------LAQEIFSGNGKVTV--NDFMDTMMSE 166
L D + +P + E +F ++ ++QE GN +++ F+ + E
Sbjct: 1385 LHDCIQVPRQLGEVAAFGGSNIEPSVRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHE 1444
Query: 167 PGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRV 226
P L+WLP+LHRL A E+ H C+ C VGFRYRC KC NF MCQ+CF++GR
Sbjct: 1445 P--QSLVWLPVLHRLAAAEAAKHQAKCNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRN 1502
Query: 227 SGGHNLEHEVKE 238
+ H L H + E
Sbjct: 1503 AKNHKLTHPMHE 1514
>sp|P11533|DMD_CHICK Dystrophin OS=Gallus gallus GN=DMD PE=2 SV=1
Length = 3660
Score = 128 bits (321), Expect = 6e-29, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 35 LSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKL 94
L+++Y L + + V+V + + LNWLL+ Y GRIRV S K + ++C L
Sbjct: 3151 LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGVVSLCKAHL 3208
Query: 95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSF--SYTDTLAQEIFS-GN 151
DK RY+F Q+ G + L D + IP + E SF S + + F N
Sbjct: 3209 EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN 3268
Query: 152 GKVTVND--FMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCA 209
K + F+D M EP ++WLP+LHR+ A E+ H C+ C +GFRYR
Sbjct: 3269 NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL 3326
Query: 210 KCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
K N+ +CQ CF+ GRV+ GH + + + E
Sbjct: 3327 KHFNYDICQSCFFSGRVAKGHKMHYPMVE 3355
>sp|Q5GN48|DMD_PIG Dystrophin OS=Sus scrofa GN=DMD PE=1 SV=1
Length = 3674
Score = 127 bits (320), Expect = 7e-29, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 35 LSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKL 94
L+++Y L + + V+V + + LNWLL+ Y GRIRV S K + ++C L
Sbjct: 3143 LTTVYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIVSLCKAHL 3200
Query: 95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSF--SYTDTLAQEIFS-GN 151
DK RY+F Q+ G + L D + IP + E SF S + + F N
Sbjct: 3201 EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN 3260
Query: 152 GKVTVND--FMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCA 209
K + F+D M EP ++WLP+LHR+ A E+ H C+ C +GFRYR
Sbjct: 3261 NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL 3318
Query: 210 KCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
K N+ +CQ CF+ GRV+ GH + + + E
Sbjct: 3319 KHFNYDICQSCFFSGRVAKGHKMHYPMVE 3347
>sp|P11532|DMD_HUMAN Dystrophin OS=Homo sapiens GN=DMD PE=1 SV=3
Length = 3685
Score = 127 bits (319), Expect = 8e-29, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 35 LSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKL 94
L+++Y L + + V+V + + LNWLL+ Y GRIRV S K + ++C L
Sbjct: 3154 LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL 3211
Query: 95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSF--SYTDTLAQEIFS-GN 151
DK RY+F Q+ G + L D + IP + E SF S + + F N
Sbjct: 3212 EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN 3271
Query: 152 GKVTVND--FMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCA 209
K + F+D M EP ++WLP+LHR+ A E+ H C+ C +GFRYR
Sbjct: 3272 NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL 3329
Query: 210 KCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
K N+ +CQ CF+ GRV+ GH + + + E
Sbjct: 3330 KHFNYDICQSCFFSGRVAKGHKMHYPMVE 3358
>sp|O97592|DMD_CANFA Dystrophin OS=Canis familiaris GN=DMD PE=2 SV=1
Length = 3680
Score = 127 bits (319), Expect = 9e-29, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 35 LSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKL 94
L+++Y L + + V+V + + LNWLL+ Y GRIRV S K + ++C L
Sbjct: 3149 LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL 3206
Query: 95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSF--SYTDTLAQEIFS-GN 151
DK RY+F Q+ G + L D + IP + E SF S + + F N
Sbjct: 3207 EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN 3266
Query: 152 GKVTVND--FMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCA 209
K + F+D M EP ++WLP+LHR+ A E+ H C+ C +GFRYR
Sbjct: 3267 NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL 3324
Query: 210 KCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
K N+ +CQ CF+ GRV+ GH + + + E
Sbjct: 3325 KHFNYDICQSCFFSGRVAKGHKMHYPMVE 3353
>sp|P11531|DMD_MOUSE Dystrophin OS=Mus musculus GN=Dmd PE=1 SV=3
Length = 3678
Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 35 LSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKL 94
L+++Y L + + V+V + + LNWLL+ Y GRIRV S K + ++C L
Sbjct: 3147 LTTIYDRLEQEH--NNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHL 3204
Query: 95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSF--SYTDTLAQEIFS-GN 151
DK RY+F Q+ G + L D + IP + E SF S + + F N
Sbjct: 3205 EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN 3264
Query: 152 GKVTVND--FMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCA 209
K + F+D M EP ++WLP+LHR+ A E+ H C+ C +GFRYR
Sbjct: 3265 NKPEIEAALFLDWMRLEP--QSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSL 3322
Query: 210 KCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
K N+ +CQ CF+ GRV+ GH + + + E
Sbjct: 3323 KHFNYDICQSCFFSGRVAKGHKMHYPMVE 3351
>sp|P46939|UTRO_HUMAN Utrophin OS=Homo sapiens GN=UTRN PE=1 SV=2
Length = 3433
Score = 124 bits (311), Expect = 7e-28, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 15/236 (6%)
Query: 10 EAFRENGLNAIELQSD--VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLS 67
E F+++ LN Q+D +SV L++ Y L + V+V + + LNWLL+
Sbjct: 2888 EIFKQHKLN----QNDQLLSVPDVINCLTTTYDGLEQMH--KDLVNVPLCVDMCLNWLLN 2941
Query: 68 AYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAI 127
Y G+IRV S+K+ L ++ G L +K RY+F ++ + L D + I
Sbjct: 2942 VYDTGRTGKIRVQSLKIGLMSLSKGLLEEKYRYLFKEVAGPTEMCDQRQLGLLLHDAIQI 3001
Query: 128 PAAVLESPSF--SYTDTLAQEIFSGNG---KVTVNDFMDTMMSEPGPACLIWLPLLHRLT 182
P + E +F S + + F N +++V +F+D M EP ++WLP+LHR+
Sbjct: 3002 PRQLGEVAAFGGSNIEPSVRSCFQQNNNKPEISVKEFIDWMHLEP--QSMVWLPVLHRVA 3059
Query: 183 AVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
A E+ H C+ C VGFRYR K N+ +CQ CF+ GR + GH L + + E
Sbjct: 3060 AAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVE 3115
>sp|Q05AA6|DRP2_MOUSE Dystrophin-related protein 2 OS=Mus musculus GN=Drp2 PE=1 SV=1
Length = 957
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 15/243 (6%)
Query: 3 IDIWNVIEAFRENGLNAIELQSDVSVARFETL--LSSLYHNLNKRLPVSQQVHVEVLSGL 60
+ + +E F E+ L A E DV E + L++LY L + + V+V + +
Sbjct: 421 VTLTTALEIFNEHDLQASEHVMDV----VEVIHCLTALYERLEEERGIL--VNVPLCVDM 474
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
LNWLL+ + G++R S K +A +C ++ +KL+Y+FSQ+ +
Sbjct: 475 SLNWLLNVFDSGRSGKMRALSFKTGIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGAL 534
Query: 121 LQDVLAIPAAVLESPSF--SYTDTLAQEIF---SGNGKVTVNDFMDTMMSEPGPACLIWL 175
L + + +P + E +F S + + F +G + + F++ + EP ++WL
Sbjct: 535 LHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRFSTGKPVIEASQFLEWVNLEP--QSMVWL 592
Query: 176 PLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHE 235
+LHR+T E H C C + GFRYR K N +CQ CF GR S G+ L +
Sbjct: 593 AVLHRVTIAEQVKHQTKCSICRQCPIKGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYP 652
Query: 236 VKE 238
+ E
Sbjct: 653 IME 655
>sp|Q9EPA0|DRP2_RAT Dystrophin-related protein 2 OS=Rattus norvegicus GN=Drp2 PE=1 SV=1
Length = 957
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 15/243 (6%)
Query: 3 IDIWNVIEAFRENGLNAIELQSDVSVARFETL--LSSLYHNLNKRLPVSQQVHVEVLSGL 60
+ + +E F E+ L A E DV E + L++LY L + + V+V + +
Sbjct: 421 VTLTTALEIFNEHDLQASEHVMDV----VEVIHCLTALYERLEEERGIL--VNVPLCVDM 474
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
LNWLL+ + G++R S K +A +C ++ +KL+Y+FSQ+ +
Sbjct: 475 SLNWLLNVFDSGRSGKMRALSFKTGIACLCGTEVKEKLQYLFSQVANSGSKCDQRHLGAL 534
Query: 121 LQDVLAIPAAVLESPSF--SYTDTLAQEIF---SGNGKVTVNDFMDTMMSEPGPACLIWL 175
L + + +P + E +F S + + F +G + + F++ + EP ++WL
Sbjct: 535 LHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRFSTGKPVIEASQFLEWVNLEP--QSMVWL 592
Query: 176 PLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHE 235
+LHR+T E H C C + GFRYR K N +CQ CF GR S G+ L +
Sbjct: 593 AVLHRVTVAEQVKHQTKCSICRQCPIKGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYP 652
Query: 236 VKE 238
+ E
Sbjct: 653 IME 655
>sp|Q13474|DRP2_HUMAN Dystrophin-related protein 2 OS=Homo sapiens GN=DRP2 PE=2 SV=2
Length = 957
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 15/243 (6%)
Query: 3 IDIWNVIEAFRENGLNAIELQSDVSVARFETL--LSSLYHNLNKRLPVSQQVHVEVLSGL 60
+ + +E F E+ L A E DV E + L++LY L + + V+V + +
Sbjct: 421 VTLTTALEIFNEHDLQASEHVMDV----VEVIHCLTALYERLEEERGIL--VNVPLCVDM 474
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEY 120
LNWLL+ + G++R S K +A +C ++ +KL+Y+FSQ+ +
Sbjct: 475 SLNWLLNVFDSGRSGKMRALSFKTGIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGVL 534
Query: 121 LQDVLAIPAAVLESPSF--SYTDTLAQEIF---SGNGKVTVNDFMDTMMSEPGPACLIWL 175
L + + +P + E +F S + + F +G + + F++ + EP ++WL
Sbjct: 535 LHEAIQVPRQLGEVAAFGGSNVEPSVRSCFRFSTGKPVIEASQFLEWVNLEP--QSMVWL 592
Query: 176 PLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHE 235
+LHR+T E H C C + GFRYR K N +CQ CF GR S G+ L +
Sbjct: 593 AVLHRVTIAEQVKHQTKCSICRQCPIKGFRYRSLKQFNVDICQTCFLTGRASKGNKLHYP 652
Query: 236 VKE 238
+ E
Sbjct: 653 IME 655
>sp|Q9TW65|DMD_CAEEL Dystrophin-1 OS=Caenorhabditis elegans GN=dys-1 PE=1 SV=2
Length = 3674
Score = 103 bits (258), Expect = 9e-22, Method: Composition-based stats.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 35 LSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATMCSGKL 94
L +Y L+ + P +Q V + + +N+LL+ + G +RV S K+A+ + L
Sbjct: 3147 LLPMYEALHAKYP-NQVQSVSLAVDICINFLLNLFDQSRDGIMRVLSFKIAMIVFSNIPL 3205
Query: 95 MDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQ-----EIFS 149
+K RY+F +L +GH + L D++ IP V ES +F T+ E
Sbjct: 3206 EEKYRYLF-KLVSQDGHATQKQIALLLYDLIHIPRLVGESAAFGGTNVEPSVRSCFETVR 3264
Query: 150 GNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCA 209
++ F+D + EP ++WL ++HRL EST H C+ C +G RYRC
Sbjct: 3265 LAPTISEGAFIDWVKKEP--QSIVWLAVMHRLVISESTKHASKCNVCKMFPIIGIRYRCL 3322
Query: 210 KCGNFQMCQECFWWGRVSGGHNLEHEVKE 238
C N +CQ CF+ R + H H ++E
Sbjct: 3323 TCFNCDLCQNCFFSQRTAKSHRTNHPMQE 3351
>sp|A2CJ06|DYTN_HUMAN Dystrotelin OS=Homo sapiens GN=DYTN PE=2 SV=1
Length = 578
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 95/223 (42%), Gaps = 14/223 (6%)
Query: 26 VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVA 85
+SV + L L+ + P QVH L L+ L + Y+ + G +++ A
Sbjct: 57 LSVQQLSQALQELFQKAREENPG--QVHPRA-PELTLSLLTTMYNSKGTGFLQLMPAAAA 113
Query: 86 LATMCSGKLMDKLRYIFSQLC-------DCNGHLVAWKFNEYLQDVLAIPAAVLESPSFS 138
L T+ + K R +F D + + L D+ IP V ES +
Sbjct: 114 LITLSGDSPLSKYRALFQLYAENSRGGYDSGPRMTRRVLRKLLTDLQQIPTFVGESRALC 173
Query: 139 YTDTLAQEIFSG--NGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDAC 196
++ + F G + + F+ + SEP L+WLP HRL+A E +HP C C
Sbjct: 174 PVESATRSCFQGVLSPAIKEEKFLSWVQSEP--PILLWLPTCHRLSAAERVTHPARCTLC 231
Query: 197 GRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN 239
G RYRC KC NF +CQ CF G S H H V E+
Sbjct: 232 RTFPITGLRYRCLKCLNFDICQMCFLSGLHSKSHQKSHPVIEH 274
>sp|A2CI97|DYTN_DANRE Dystrotelin OS=Danio rerio GN=dytn PE=2 SV=1
Length = 648
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 107/246 (43%), Gaps = 22/246 (8%)
Query: 4 DIWNVIEAFRENGLNAIEL-QSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLL 62
D+ ++ +G + I L Q DV + L L+ +++ LP Q E +
Sbjct: 39 DLRPILNTLWSSGESTISLAQEDV-----QQHLEELFRSISPELP--DQAVTEA-TDQTT 90
Query: 63 NWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIF--------SQLCDCNGHLVA 114
L + G I + S++ AL +C L K R +F +Q D G +
Sbjct: 91 RLLFKLFDRGQTGVILLRSVEAALIALCGDTLSAKQRALFRLAESYSGNQESD-RGSISR 149
Query: 115 WKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSG--NGKVTVNDFMDTMMSEPGPACL 172
L+D+ +PA V E+ F + +T F+G + VT F+ + SEP L
Sbjct: 150 SALRVLLEDLSQVPAVVQENHVFGHAETAVSSCFNGVISAGVTEEHFIWWLQSEPR--LL 207
Query: 173 IWLPLLHRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNL 232
+WL L+R++ E+ H + C AC G RYRC KC N +CQ CF R S H
Sbjct: 208 LWLSTLYRISVSEAVQHRVHCHACKAFPITGLRYRCLKCLNVHLCQSCFLTERRSRKHKP 267
Query: 233 EHEVKE 238
H V E
Sbjct: 268 SHSVLE 273
>sp|A2CI98|DYTN_MOUSE Dystrotelin OS=Mus musculus GN=Dytn PE=2 SV=1
Length = 653
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 93/233 (39%), Gaps = 14/233 (6%)
Query: 16 GLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLG 75
G + ++ +SV + L L+ + + QVH L L+ L++ + G
Sbjct: 47 GRSGESTETSISVQQLFQELRELFQRTG--MGNAAQVHPRA-PELTLSLLMAMFDRTGSG 103
Query: 76 RIRVFSIKVALATMCSGKLMDKLRYIFSQLC-------DCNGHLVAWKFNEYLQDVLAIP 128
++ + AL + + K R F D + L D+ IP
Sbjct: 104 ILKRQPVAAALVALSGDSPLTKYRAFFQLYAEKNRRGDDSQARMTRRVLRALLTDLQQIP 163
Query: 129 AAVLESPSFSYTDTLAQEIFSG--NGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVES 186
V ES + ++ F G + + F+ SEP L+WLP +RL+A E+
Sbjct: 164 TVVGESYTLRPVESAIHSCFRGVLSSGIKEEKFLSWAQSEP--LVLLWLPTCYRLSAAET 221
Query: 187 TSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKEN 239
+HP+ C C +G RY C KC +F +C+ CF G H H V E
Sbjct: 222 VTHPVRCSVCRTFPIIGLRYHCLKCLDFDICELCFLSGLHKNSHEKSHTVMEE 274
>sp|Q24629|REF2P_DROSI Protein ref(2)P OS=Drosophila simulans GN=ref(2)P PE=4 SV=1
Length = 599
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQEC 220
+ CD CG A +GFRY+C +C NF +CQ+C
Sbjct: 125 VQCDGCGLAPLIGFRYKCVQCSNFDLCQKC 154
>sp|P14199|REF2P_DROME Protein ref(2)P OS=Drosophila melanogaster GN=ref(2)P PE=1 SV=2
Length = 599
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQEC 220
+ CD CG A +GFRY+C +C N+ +CQ+C
Sbjct: 125 VECDGCGLAPLIGFRYKCVQCSNYDLCQKC 154
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2 SV=1
Length = 383
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVK 237
++CDAC + NF G RY+C C ++ +C C+ G + H EH ++
Sbjct: 7 VSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQ 53
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 18/110 (16%)
Query: 130 AVLESPSFSYTDTLAQEI-----FSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAV 184
A + +P + + Q + FS NGK + DF P W LL + V
Sbjct: 2650 ASVTTPKYKWGSVTHQSVGLVKAFSANGKDIIVDF---------PQQSHWTGLLSEMELV 2700
Query: 185 ESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
S + CD C G R++C C +F C+ CF + HN H
Sbjct: 2701 PSIHPGVTCDGCQTFPINGSRFKCRNCDDFDFCETCFKTKK----HNTRH 2746
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 18/110 (16%)
Query: 130 AVLESPSFSYTDTLAQEI-----FSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAV 184
A + +P + + Q + FS NGK + DF P W LL + V
Sbjct: 2649 ASVTTPKYKWGSVTHQSVGVVKAFSANGKDIIVDF---------PQQSHWTGLLSEMELV 2699
Query: 185 ESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
S + CD C G R++C C +F C+ CF + HN H
Sbjct: 2700 PSIHPGVTCDGCQMFPINGSRFKCRNCDDFDFCETCFKTKK----HNTRH 2745
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVK 237
++CDAC + NF G RY+C C ++ +C C+ G + H +H ++
Sbjct: 7 VSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQ 53
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVK 237
++CDAC + NF G RY+C C ++ +C C+ G + H +H ++
Sbjct: 7 VSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQ 53
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2 SV=1
Length = 381
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVK 237
++CDAC + NF G RY+C C ++ +C C+ G + H +H ++
Sbjct: 7 VSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQ 53
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVK 237
++CDAC + NF G RY+C C ++ +C C+ G + H +H ++
Sbjct: 7 VSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQ 53
>sp|P34664|YOY6_CAEEL Uncharacterized protein ZK652.6 OS=Caenorhabditis elegans
GN=ZK652.6 PE=4 SV=2
Length = 575
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 181 LTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQECF 221
+T + T ++CD C F G RY+C +C ++ +C CF
Sbjct: 2 VTPLTGTHEGVSCDGCAFTAFAGNRYKCLRCSDYDLCFSCF 42
>sp|Q9FYH1|HAC2_ARATH Histone acetyltransferase HAC2 OS=Arabidopsis thaliana GN=HAC2 PE=2
SV=2
Length = 1367
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 148 FSGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVESTSHPIACDACGRANFVGFRYR 207
+ G V V+D + ++ E + P L VE +C C +A G R+
Sbjct: 1059 YKTTGDVDVDDVKNILLMEKLEKEV--FPNKKDLMVVELN---YSCTRCSKAVLSGLRWF 1113
Query: 208 CAKCGNFQMCQECFWWGR-VSGGHNLEHEVKENHPVNKL 245
C KC N +C+ C+ G+ + G H + KE H ++K+
Sbjct: 1114 CEKCKNLHLCESCYDAGQELPGEHIYKRMDKEKHQLSKV 1152
>sp|O43149|ZZEF1_HUMAN Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Homo
sapiens GN=ZZEF1 PE=1 SV=6
Length = 2961
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEV 236
I+CD C RYRC +C + +C+ CF G GH +HE+
Sbjct: 1781 ISCDGCDEIA-PWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEM 1825
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPV 242
CD C + +G R C C +F +C C+ + S GH H + HP+
Sbjct: 1832 CDHC-QGLIIGRRMNCNVCDDFDLCYGCYAAKKYSYGHLPTHSIT-AHPM 1879
>sp|Q5SSH7|ZZEF1_MOUSE Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Mus
musculus GN=Zzef1 PE=1 SV=2
Length = 2924
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEV 236
I+CD C RYRC +C + +C+ CF G GH +HE+
Sbjct: 1779 ISCDGCDEIA-PWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEM 1823
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 192 ACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPV 242
CD C + +G R C C +F +C C+ + S GH H + HP+
Sbjct: 1829 TCDHC-QGLIIGRRMNCNVCDDFDLCYGCYTAKKYSYGHLPTHSITA-HPM 1877
>sp|Q804S5|MIB1_DANRE E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN=mib1 PE=1 SV=1
Length = 1030
Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
CD C + +G R++CA+C N+ +C C+ + H+L H
Sbjct: 85 CDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDK----HHLRH 122
>sp|P62749|HPCL1_RAT Hippocalcin-like protein 1 OS=Rattus norvegicus GN=Hpcal1 PE=1 SV=2
Length = 193
Score = 38.5 bits (88), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD 123
+ + S G I +AL+ GKL KL++ FS D NG++ + E +Q
Sbjct: 68 VFRTFDTNSDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIVQA 127
Query: 124 VLAIPAAVL-----ESPSFSYTDTLAQEIFSGN-GKVTVNDFMDTMMSEPGPACLI 173
+ + ++V+ ES TD + +++ + N GK+++ +F+ S+P L+
Sbjct: 128 IYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDPSIVRLL 183
>sp|P62748|HPCL1_MOUSE Hippocalcin-like protein 1 OS=Mus musculus GN=Hpcal1 PE=2 SV=2
Length = 193
Score = 38.5 bits (88), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD 123
+ + S G I +AL+ GKL KL++ FS D NG++ + E +Q
Sbjct: 68 VFRTFDTNSDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIVQA 127
Query: 124 VLAIPAAVL-----ESPSFSYTDTLAQEIFSGN-GKVTVNDFMDTMMSEPGPACLI 173
+ + ++V+ ES TD + +++ + N GK+++ +F+ S+P L+
Sbjct: 128 IYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDPSIVRLL 183
>sp|Q5ZIJ9|MIB2_CHICK E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus GN=MIB2 PE=2 SV=1
Length = 954
Score = 38.1 bits (87), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 189 HP-IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLE-HEVKENHPV 242
HP I CD C + G R++C C ++ +C +C+ + H E +E + PV
Sbjct: 86 HPNIICDCCKKHGIRGMRWKCKMCFDYDLCTQCYMNNKHDLSHAFERYETAHSQPV 141
>sp|Q54QG5|Y3893_DICDI Probable E3 ubiquitin-protein ligase DDB_G0283893 OS=Dictyostelium
discoideum GN=DDB_G0283893 PE=3 SV=2
Length = 5875
Score = 38.1 bits (87), Expect = 0.073, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 192 ACDACGRANFVGFRYRCAKCGNFQMCQECF 221
+CD C G R+ C+ CG+F +C +C+
Sbjct: 3230 SCDLCNINPITGKRWNCSNCGDFDLCNQCY 3259
>sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1 OS=Xenopus laevis GN=mib1 PE=2
SV=1
Length = 1011
Score = 38.1 bits (87), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
CD C + +G R++CA+C N+ +C C+ + H+L H
Sbjct: 85 CDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDK----HHLRH 122
>sp|Q80SY4|MIB1_MOUSE E3 ubiquitin-protein ligase MIB1 OS=Mus musculus GN=Mib1 PE=1 SV=1
Length = 1006
Score = 38.1 bits (87), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
CD C + +G R++CA+C N+ +C C+ + H+L H
Sbjct: 85 CDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDK----HHLRH 122
>sp|Q86YT6|MIB1_HUMAN E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1
Length = 1006
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
CD C + +G R++CA+C N+ +C C+ + H+L H
Sbjct: 85 CDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDK----HHLRH 122
>sp|Q6DCM9|HPCL1_XENLA Hippocalcin-like protein 1 OS=Xenopus laevis GN=hpcal1 PE=2 SV=1
Length = 193
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD 123
+ + G I +AL+ GKL KL++ FS D NG++ + E +Q
Sbjct: 68 VFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRGEMLEIVQA 127
Query: 124 VLAIPAAVL-----ESPSFSYTDTLAQEIFSGN-GKVTVNDFMDTMMSEP 167
+ + ++V+ ES TD + +++ + N GK+++ +F+ S+P
Sbjct: 128 IYKMVSSVMKMPEDESTPEKRTDKIFKQMDTNNDGKLSLEEFIKGAKSDP 177
>sp|Q28IM6|HPCL1_XENTR Hippocalcin-like protein 1 OS=Xenopus tropicalis GN=hpcal1 PE=2
SV=1
Length = 193
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD 123
+ + G I +AL+ GKL KL++ FS D NG++ + E +Q
Sbjct: 68 VFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRGEMLEIVQA 127
Query: 124 VLAIPAAVL-----ESPSFSYTDTLAQEIFSGN-GKVTVNDFMDTMMSEP 167
+ + ++V+ ES TD + +++ + N GK+++ +F+ S+P
Sbjct: 128 IYKMVSSVMKMPEDESTPEKRTDKIFKQMDTNNDGKLSLEEFIKGAKSDP 177
>sp|B5FZ84|HPCL1_TAEGU Hippocalcin-like protein 1 OS=Taeniopygia guttata GN=HPCAL1 PE=2
SV=1
Length = 193
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD 123
+ + G I +AL+ GKL KL++ FS D NG++ + E +Q
Sbjct: 68 VFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRGEMLEIVQA 127
Query: 124 VLAIPAAVL-----ESPSFSYTDTLAQEIFSGN-GKVTVNDFMDTMMSEP 167
+ + ++V+ ES TD + +++ + N GK+++ +F+ S+P
Sbjct: 128 IYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDP 177
>sp|P42324|HPCL1_CHICK Hippocalcin-like protein 1 OS=Gallus gallus GN=HPCAL1 PE=1 SV=2
Length = 193
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQD 123
+ + G I +AL+ GKL KL++ FS D NG++ + E +Q
Sbjct: 68 VFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRGEMLEIVQA 127
Query: 124 VLAIPAAVL-----ESPSFSYTDTLAQEIFSGN-GKVTVNDFMDTMMSEP 167
+ + ++V+ ES TD + +++ + N GK+++ +F+ S+P
Sbjct: 128 IYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDP 177
>sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1
SV=1
Length = 555
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEH 234
C C + + G R CA+C NF +C +CF G G H H
Sbjct: 13 CTNC-QDDIQGIRVHCAECENFDLCLQCFAAGAEIGAHQNNH 53
>sp|Q14596|NBR1_HUMAN Next to BRCA1 gene 1 protein OS=Homo sapiens GN=NBR1 PE=1 SV=3
Length = 966
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQEC 220
IAC+ C R VG RY+C+ C ++ +C++C
Sbjct: 215 IACNNCQR-RIVGVRYQCSLCPSYNICEDC 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,792,191
Number of Sequences: 539616
Number of extensions: 3880693
Number of successful extensions: 12783
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 12697
Number of HSP's gapped (non-prelim): 118
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)