RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4949
(275 letters)
>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 97
Score = 118 bits (297), Expect = 1e-34
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 94 LMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTD--TLAQEIF--- 148
L DK RY+F Q+ G + L D + IP + E SF ++ + F
Sbjct: 2 LEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFA 61
Query: 149 SGNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAVES 186
+ ++ F+D M EP ++WLP+LHR+ A E+
Sbjct: 62 NNKPEIEAALFLDWMRLEPQ--SMVWLPVLHRVAAAET 97
>d1eg3a1 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 125
Score = 113 bits (284), Expect = 3e-32
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 1 HTIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGL 60
+ + +A ++ L + + + + L+++Y L + V+V + +
Sbjct: 38 DLLSLSAACDALDQHNLKQND--QPMDILQIINCLTTIYDRLEQEHN--NLVNVPLCVDM 93
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMC 90
LNWLL+ Y GRIRV S K + ++C
Sbjct: 94 CLNWLLNVYDTGRTGRIRVLSFKTGIISLC 123
>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 59.6 bits (144), Expect = 2e-12
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 189 HPIACDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPVNKLVTR 248
I C+ C + G Y+C +C + +CQECF H K N L R
Sbjct: 23 LGIPCNNCKQFPIEGKCYKCTECIEYHLCQECF-DSYCHLSHTFTFREKRNQKWRSLEKR 81
>d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3,
ZZZ3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 69
Score = 55.9 bits (134), Expect = 3e-11
Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Query: 185 ESTSHP-IACDACGRANFVGFRYRCAKCG---NFQMCQECFWWGRVSGGHNLEHEVK 237
H CD CG G R+ C C + C C + H +H+++
Sbjct: 8 GFVQHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLE 64
>d1tota1 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 52
Score = 45.6 bits (108), Expect = 9e-08
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFW 222
C+ C V R+ C C ++ +C C+
Sbjct: 9 CNECKH--HVETRWHCTVCEDYDLCINCYN 36
>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}
Length = 181
Score = 36.3 bits (83), Expect = 0.002
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLC-DCNGHLVAWKFNE 119
+ + G I +AL+ GKL KL++ FS D NG++ + E
Sbjct: 60 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 119
Query: 120 YLQDVLAIPAAVLESPS-FSYTDTLAQEIFS-----GNGKVTVNDFMDTMMSEP 167
+Q + + ++V++ P S + ++IF +GK+++ +F+ S+P
Sbjct: 120 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDP 173
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 107
Score = 34.9 bits (80), Expect = 0.002
Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 14/85 (16%)
Query: 87 ATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQ 145
+ K +D ++ F + D +G + + +LQ+ + + TD +
Sbjct: 31 KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQN--------FSPSARALTDAETK 82
Query: 146 EIFS-----GNGKVTVNDFMDTMMS 165
+ G+G + V++F + +
Sbjct: 83 AFLADGDKDGDGMIGVDEFAAMIKA 107
>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 108
Score = 33.8 bits (77), Expect = 0.005
Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 87 ATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQ 145
+ S +++ IF + D +G+L + +LQ +S + T++ +
Sbjct: 32 TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQK--------FQSDARELTESETK 83
Query: 146 EIFS-----GNGKVTVNDFMDTMMS 165
+ G+GK+ ++F + + S
Sbjct: 84 SLMDAADNDGDGKIGADEFQEMVHS 108
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 89
Score = 32.6 bits (74), Expect = 0.009
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Query: 179 HRLTAVESTSHPIACDACGRANFVGFRYRCAKCGNFQMCQEC 220
H L CD C + Y C +C +F + +C
Sbjct: 38 HELELT--RVQVYTCDKCEEEGT-IWSYHCDEC-DFDLHAKC 75
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 109
Score = 31.0 bits (70), Expect = 0.039
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 87 ATMCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQ 145
+ ++ +F + D +G + E L+ VL AA + + T +
Sbjct: 32 LVGLKAMSANDVKKVFKAIDADASGFIEE----EELKFVLKSFAADGRDLTDAETKAFLK 87
Query: 146 EI-FSGNGKVTVNDFMDTMMSE 166
G+GK+ +++F T++ E
Sbjct: 88 AADKDGDGKIGIDEFE-TLVHE 108
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 187
Score = 32.1 bits (72), Expect = 0.048
Identities = 21/115 (18%), Positives = 46/115 (40%), Gaps = 7/115 (6%)
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLC-DCNGHLVAWKFNE 119
++ + + GRI AL+ G L +KLR+ F D +G++ + +
Sbjct: 61 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 120
Query: 120 YLQDVLA-IPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMMSEPG 168
+ + + V + + IF+ +GK+T+ +F + ++P
Sbjct: 121 IVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPS 175
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId:
10117]}
Length = 109
Score = 30.7 bits (69), Expect = 0.060
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 91 SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEI-F 148
K D ++ +F L D +G + + L +L ++ S T TL
Sbjct: 36 KKKSADDVKKVFHILDKDKSGFIEE----DELGSILKGFSSDARDLSAKETKTLMAAGDK 91
Query: 149 SGNGKVTVNDFMDTMMSE 166
G+GK+ V +F T+++E
Sbjct: 92 DGDGKIGVEEFS-TLVAE 108
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis
semifasciata) [TaxId: 30493]}
Length = 109
Score = 30.7 bits (69), Expect = 0.064
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 91 SGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEI-F 148
GK +++ +F L D +G + E L+ VL +A + + T L
Sbjct: 36 KGKTDAQVKEVFEILDKDQSGFIEE----EELKGVLKGFSAHGRDLNDTETKALLAAGDS 91
Query: 149 SGNGKVTVNDFMDTMMSE 166
+GK+ ++F M+++
Sbjct: 92 DHDGKIGADEFA-KMVAQ 108
>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 170
Score = 31.2 bits (70), Expect = 0.070
Identities = 7/97 (7%), Positives = 24/97 (24%), Gaps = 11/97 (11%)
Query: 80 FSIKVALATMCSGKLMDKLRYIFSQLC-DCNGHLVAWKFNEYLQDVLAIPAAVLESPSFS 138
F V + + S ++ IF+ ++ +++ +
Sbjct: 62 FPEPVYKSFLMSLCPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSR-LNSLLFPP 120
Query: 139 YTDTLAQEIFS---------GNGKVTVNDFMDTMMSE 166
Q + G+++ + +
Sbjct: 121 ARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGP 157
>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2,
GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}
Length = 189
Score = 31.0 bits (69), Expect = 0.093
Identities = 18/115 (15%), Positives = 39/115 (33%), Gaps = 12/115 (10%)
Query: 65 LLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLC-------DCNGHLVAWKF 117
+ A+ I AL + G L KL++ F D L +
Sbjct: 63 MFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVES 122
Query: 118 NEYLQDVLAIPAAVLESPSFSYTDTLAQEIFS-----GNGKVTVNDFMDTMMSEP 167
L+ ++ + + + IF G+G++++N+F++ +
Sbjct: 123 IYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDK 177
>d2g45a1 g.44.1.5 (A:173-285) Ubiquitin carboxyl-terminal hydrolase
5, UBP5 {Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 30.3 bits (68), Expect = 0.094
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQECFWWGRVSGGHNLEHEVKENHPV-NKLVTRYAN 251
C C + + G +C ++ G H +EH + +P+ KL T +
Sbjct: 27 CSKCDMRENL---WLNLTDG-SILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPD 82
Query: 252 HFAVF 256
V+
Sbjct: 83 GADVY 87
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 190
Score = 30.6 bits (68), Expect = 0.14
Identities = 22/145 (15%), Positives = 54/145 (37%), Gaps = 7/145 (4%)
Query: 30 RFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATM 89
F S + + +Q N L + + ++ G I L+T
Sbjct: 33 GFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTT 92
Query: 90 CSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLE-SPSFSYTDTLAQEI 147
G L +KL + F + +G++ + + V + +++ + + + ++I
Sbjct: 93 SRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKI 152
Query: 148 FS-----GNGKVTVNDFMDTMMSEP 167
F +G +T+++F + +P
Sbjct: 153 FKLMDKNEDGYITLDEFREGSKVDP 177
>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 183
Score = 29.5 bits (65), Expect = 0.30
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
Query: 89 MCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF 148
+ + DK+ + F + E Q V+A A + + + + + F
Sbjct: 84 HPNAPIDDKIHFSFQLYDLKQQGF--IERQEVKQMVVATLAESGMNLKDTVIEDIIDKTF 141
Query: 149 S-----GNGKVTVNDFMDTMMSEPGPACLIWLPLLHRLTAV 184
+GK+ ++ ++ P + L L +T
Sbjct: 142 EEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLKDITTT 182
>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}
Length = 201
Score = 28.6 bits (63), Expect = 0.63
Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 61 LLNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLC-DCNGHLVAWKFNE 119
+ ++ S G + +AL +GK KL + FS D NG + + E
Sbjct: 64 YAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 123
Query: 120 YLQDVLAI--PAAVLESPSFSYT-DTLAQEIFS-----GNGKVTVNDFMDTMMSEP 167
+ + + P P T + A++I+ + K+T +F++ ++
Sbjct: 124 IVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANK 179
>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 178
Score = 28.2 bits (62), Expect = 0.76
Identities = 20/145 (13%), Positives = 53/145 (36%), Gaps = 7/145 (4%)
Query: 30 RFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVALATM 89
F+ S N + Q + ++L +A+ G ++ AL+ +
Sbjct: 21 GFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSIL 80
Query: 90 CSGKLMDKLRYIFSQLC-DCNGHLVAWKFNEYLQDVLAIPAA-VLESPSFSYTDTLAQEI 147
G + +KLR+ F+ + +G++ + + ++ + +
Sbjct: 81 LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVF 140
Query: 148 FS-----GNGKVTVNDFMDTMMSEP 167
F +G VT+++F+++ +
Sbjct: 141 FQKMDKNKDGIVTLDEFLESCQEDD 165
>d2idaa1 g.44.1.5 (A:1-102) Hypothetical protein RPA1320
{Rhodopseudomonas palustris [TaxId: 1076]}
Length = 102
Score = 27.3 bits (60), Expect = 0.85
Identities = 8/46 (17%), Positives = 14/46 (30%), Gaps = 10/46 (21%)
Query: 207 RCAKCG-------NFQMCQEC---FWWGRVSGGHNLEHEVKENHPV 242
C +C + ++C+ C H H HP+
Sbjct: 20 GCEECLKIGSPWVHLRICRTCGHVGCCDDSPHKHATRHFHATGHPI 65
>d1ynha1 d.126.1.7 (A:3-441) Succinylarginine dihydrolase
{Escherichia coli [TaxId: 562]}
Length = 439
Score = 28.5 bits (64), Expect = 0.88
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 109 NGHLVAWKFNEYLQDVLAIPAAVLESPS-FSYTDTLAQEIFSGNGKVTVNDFMDTMMSEP 167
N L++ + L +P E + Y + L + ++ V D ++M +
Sbjct: 304 NSQLLSRDDGSMM---LVLPQECREHAGVWGYLNELLAAD-NPISELKVFDLRESMANGG 359
Query: 168 GPACL 172
GPACL
Sbjct: 360 GPACL 364
>d1px9a_ g.3.7.2 (A:) Ergtoxin (HERG specific toxin CnErg1)
{Scorpion (Centruroides noxius) [TaxId: 6878]}
Length = 42
Score = 25.7 bits (56), Expect = 0.91
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 207 RCAKCGNFQMCQEC 220
RCAK G +Q CQ+C
Sbjct: 10 RCAKYGYYQECQDC 23
>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop
(Aequipecten irradians) [TaxId: 31199]}
Length = 152
Score = 27.7 bits (60), Expect = 0.98
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Query: 131 VLESPSFSYTDTLAQEIFS-------GNGKVTVNDFMDTMMSEPGP 169
VL + +D EI G V DF+ +M+ P P
Sbjct: 107 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYP 152
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium
album) [TaxId: 3559]}
Length = 81
Score = 26.4 bits (58), Expect = 1.0
Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Query: 95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEI-FSGNG 152
+ IF + + +G + + + + L+ L S + + EI G+G
Sbjct: 5 IADRERIFKRFDTNGDGKISSSELGDALKT--------LGSVTPDEVRRMMAEIDTDGDG 56
Query: 153 KVTVNDFMDTMMSEPGP 169
++ ++F D + G
Sbjct: 57 FISFDEFTDFARANRGL 73
>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId:
9606]}
Length = 165
Score = 27.7 bits (61), Expect = 1.1
Identities = 22/166 (13%), Positives = 50/166 (30%), Gaps = 18/166 (10%)
Query: 2 TIDIWNVIEAFRENGLNAIELQSDVSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLL 61
+D + ++G+N S S+ +++ L + ++ + +
Sbjct: 15 EVDAEELQRCLTQSGINGTY--SPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAW 72
Query: 62 LNWLLSAYSVESLGRIRVFSIKVALATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYL 121
+ G + ++ A+ M L I + NG + F++Y+
Sbjct: 73 KENF-MTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR-YSKNGRI---FFDDYV 127
Query: 122 QDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTVN--DFMDTMMS 165
+ + A F D G DF+ M+
Sbjct: 128 ACCVKLRALT---DFFRKRDH------LQQGSANFIYDDFLQGTMA 164
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 77
Score = 25.2 bits (55), Expect = 3.1
Identities = 7/72 (9%), Positives = 25/72 (34%), Gaps = 9/72 (12%)
Query: 95 MDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEI-FSGNG 152
+++ F D +G + +++ E+ + + E + +
Sbjct: 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELG-------ENLTEEELQEMIAEADRNDDN 60
Query: 153 KVTVNDFMDTMM 164
++ ++F+ M
Sbjct: 61 EIDEDEFIRIMK 72
>d2nlra_ b.29.1.11 (A:) Family 12 endo-1,4-beta-glucanase
(cellulase) catalytic domain {Streptomyces lividans,
CelB2 [TaxId: 1916]}
Length = 222
Score = 26.3 bits (58), Expect = 3.5
Identities = 4/14 (28%), Positives = 6/14 (42%)
Query: 146 EIFSGNGKVTVNDF 159
E + + VN F
Sbjct: 203 EPWQNGAGLAVNSF 216
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 59
Score = 24.4 bits (53), Expect = 4.0
Identities = 9/28 (32%), Positives = 10/28 (35%), Gaps = 1/28 (3%)
Query: 193 CDACGRANFVGFRYRCAKCGNFQMCQEC 220
C C Y CA C N C +C
Sbjct: 18 CYGCQGELKDQHVYVCAVCQNV-FCVDC 44
>d1oa2a_ b.29.1.11 (A:) Family 12 endo-1,4-beta-glucanase
(cellulase) catalytic domain {Trichoderma reesei, Cel12A
[TaxId: 51453]}
Length = 218
Score = 25.9 bits (57), Expect = 4.2
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 146 EIFSGNGKVTVNDF 159
E F+G+G + V +
Sbjct: 200 EPFTGSGTLNVASW 213
>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB
{Human (Homo sapiens) [TaxId: 9606]}
Length = 180
Score = 25.9 bits (56), Expect = 4.4
Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 8/85 (9%)
Query: 89 MCSGKLMDKLRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEI 147
+ K Y F D +G L + + + S S L I
Sbjct: 88 SDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSAS--EMKQLIDNI 145
Query: 148 FS-----GNGKVTVNDFMDTMMSEP 167
+G + +++F + P
Sbjct: 146 LEESDIDRDGTINLSEFQHVISRSP 170
>d2i0ka1 d.58.32.3 (A:274-613) Cholesterol oxidase {Brevibacterium
sterolicum [TaxId: 1702]}
Length = 340
Score = 26.1 bits (57), Expect = 4.7
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Query: 138 SYTDTLAQEIFS--GNGKVTVNDFMDTMMSEPGPACLIWLP 176
SYTD +E+F+ G T F+ E G A IW P
Sbjct: 7 SYTDIPWRELFAPKGADGRTFEKFVA----ESGGAEAIWYP 43
>d1zmec1 g.38.1.1 (C:31-66) PUT3 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 36
Score = 23.6 bits (51), Expect = 5.1
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 8/35 (22%)
Query: 191 IACDACGRANFVGFRYRCAKCGNFQMCQECFWWGR 225
+AC +C R R KC CQ+C
Sbjct: 2 VACLSC--------RKRHIKCPGGNPCQKCVTSNA 28
>d2bw8a1 b.29.1.11 (A:2-227) Family 12 endo-1,4-beta-glucanase
(cellulase) catalytic domain {Rhodothermus marinus
[TaxId: 29549]}
Length = 226
Score = 26.0 bits (57), Expect = 5.4
Identities = 4/14 (28%), Positives = 7/14 (50%)
Query: 146 EIFSGNGKVTVNDF 159
E++ G + DF
Sbjct: 206 ELWEGGAGLRSADF 219
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia)
[TaxId: 5888]}
Length = 146
Score = 25.2 bits (54), Expect = 6.8
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Query: 140 TDTLAQEIFS-----GNGKVTVNDFMDTMMS 165
TD E+ G+G + +F+ M+S
Sbjct: 116 TDDEVDEMIREADIDGDGHINYEEFVRMMVS 146
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 67
Score = 23.7 bits (51), Expect = 7.2
Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 7/69 (10%)
Query: 98 LRYIFSQL-CDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIFSGNGKVTV 156
+ +F + + +G L +F E F D GNG++
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDV------DGNGELNA 56
Query: 157 NDFMDTMMS 165
++F +
Sbjct: 57 DEFTSCIEK 65
>gi|147905802|ref|NP_001079458.1|(49-190:190) hypothetical protein
LOC379145 [Xenopus laevis] gi|27552841|gb|AAH42934.1|
MGC53335 protein [Xenopus laevis]
gi|148231599|ref|NP_001080252.1| myosin light chain,
alkali, fast skeletal muscle [Xenopus laevis]
gi|602988|gb|AAB00988.1| MLC1f/3f gene product
gi|27371205|gb|AAH41529.1| Myl1-prov protein [Xenopus
laevis] gi|45360563|ref|NP_988954.1| myosin, light
chain 1, alkali; skeletal, fast [Xenopus (Silurana)
tropicalis] gi|38174703|gb|AAH61302.1| Myosin, light
chain 1, alkali; skeletal, fast [Xenopus tropicalis]
gi|58476384|gb|AAH89727.1| Myosin, light chain 1,
alkali; skeletal, fast [Xenopus tropicalis]
gi|89272939|emb|CAJ83178.1| myosin, light polypeptide 1,
alkali; skeletal, fast [Xenopus tropicalis]
gi|197246634|gb|AAI69133.1| Myl1 protein [Xenopus
tropicalis] E=2e-66 s/c=1.79 id=85% cov=99%
Length = 142
Score = 25.0 bits (53), Expect = 7.2
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 141 DTLAQEIFSGNGKVTVNDFMDTMMS 165
++L NG + F+ +MS
Sbjct: 117 ESLLAGQEDSNGCINYEAFVKHIMS 141
>d2uzga1 g.44.1.5 (A:36-130) Ubiquitin carboxyl-terminal hydrolase
33, UBP33 {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 24.2 bits (52), Expect = 8.3
Identities = 6/44 (13%), Positives = 10/44 (22%), Gaps = 8/44 (18%)
Query: 207 RCAKCG--------NFQMCQECFWWGRVSGGHNLEHEVKENHPV 242
C C + G H+ H + H +
Sbjct: 25 TCQDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYL 68
>d1blua_ d.58.1.1 (A:) Ferredoxin II {Chromatium vinosum [TaxId:
1049]}
Length = 80
Score = 23.9 bits (51), Expect = 8.9
Identities = 10/49 (20%), Positives = 13/49 (26%), Gaps = 11/49 (22%)
Query: 183 AVESTSHPIACDACGRANFVGFRY-----------RCAKCGNFQMCQEC 220
A+ T I CD C G C +C +C
Sbjct: 1 ALMITDECINCDVCEPECPNGAISQGDETYVIEPSLCTECVGHYETSQC 49
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 156
Score = 24.9 bits (53), Expect = 9.5
Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 15/80 (18%)
Query: 89 MCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQDVLAIPAAVLESPSFSYTDTLAQEIF 148
GK ++L +F ++ D N +L++ + T+ +E+
Sbjct: 84 DSKGKSEEELSDLF-RMFDKNADGYIDLEELK---------IMLQATGETITEDDIEELM 133
Query: 149 S-----GNGKVTVNDFMDTM 163
+G++ ++F++ M
Sbjct: 134 KDGDKNNDGRIDYDEFLEFM 153
>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 176
Score = 25.0 bits (53), Expect = 9.9
Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 15/146 (10%)
Query: 26 VSVARFETLLSSLYHNLNKRLPVSQQVHVEVLSGLLLNWLLSAYSVESLGRIRVFSIKVA 85
+ A FE + K ++ ++ G L ++L V S G +
Sbjct: 24 LERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLT------- 76
Query: 86 LATMCSGKLMDKLRYIFSQLCDCNGHLVAWKFNEYLQD---VLAIPAAVLESPSFSYTDT 142
+ G +V ++ + + +
Sbjct: 77 EEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKA 136
Query: 143 LAQEIFS-----GNGKVTVNDFMDTM 163
A E F+ GNG++++++ + +
Sbjct: 137 EAAEAFNQVDTNGNGELSLDELLTAV 162
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.137 0.434
Gapped
Lambda K H
0.267 0.0576 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,049,539
Number of extensions: 47179
Number of successful extensions: 187
Number of sequences better than 10.0: 1
Number of HSP's gapped: 182
Number of HSP's successfully gapped: 45
Length of query: 275
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 191
Effective length of database: 1,254,276
Effective search space: 239566716
Effective search space used: 239566716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.1 bits)