Your job contains 1 sequence.
>psy4956
MYIIVHGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL
PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG
FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT
TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP
AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW
EPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK
P
The BLAST search returned 11 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4956
(361 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0004370 - symbol:Ptp10D "Protein tyrosine phosphat... 1237 6.1e-126 1
FB|FBgn0004368 - symbol:Ptp4E "Protein tyrosine phosphata... 1073 1.4e-107 1
MGI|MGI:97809 - symbol:Ptprb "protein tyrosine phosphatas... 222 6.7e-15 1
UNIPROTKB|E1BKN2 - symbol:TNR "Uncharacterized protein" s... 216 2.1e-14 1
UNIPROTKB|F1SS24 - symbol:FN1 "Uncharacterized protein" s... 214 7.1e-14 1
UNIPROTKB|F1S706 - symbol:TNR "Uncharacterized protein" s... 210 1.0e-13 1
UNIPROTKB|Q92752 - symbol:TNR "Tenascin-R" species:9606 "... 208 1.7e-13 1
MGI|MGI:95566 - symbol:Fn1 "fibronectin 1" species:10090 ... 207 4.5e-13 1
UNIPROTKB|F1NJT3 - symbol:FN1 "Fibronectin" species:9031 ... 207 4.5e-13 1
MGI|MGI:99516 - symbol:Tnr "tenascin R" species:10090 "Mu... 203 6.3e-13 1
ZFIN|ZDB-GENE-000426-1 - symbol:fn1 "fibronectin 1" speci... 207 7.2e-13 2
UNIPROTKB|F8W7G7 - symbol:FN1 "Ugl-Y3" species:9606 "Homo... 204 8.7e-13 1
UNIPROTKB|E9PE77 - symbol:FN1 "Ugl-Y3" species:9606 "Homo... 204 9.2e-13 1
UNIPROTKB|P02751 - symbol:FN1 "Fibronectin" species:9606 ... 204 9.5e-13 1
RGD|3886 - symbol:Tnr "tenascin R" species:10116 "Rattus ... 201 1.1e-12 1
UNIPROTKB|B8Y9T0 - symbol:FN1 "Cumulus cell-specific fibr... 203 1.2e-12 1
UNIPROTKB|B8Y9S9 - symbol:FN1 "Fibronectin" species:9913 ... 203 1.2e-12 1
UNIPROTKB|P07589 - symbol:FN1 "Fibronectin" species:9913 ... 203 1.3e-12 1
UNIPROTKB|G5E5A9 - symbol:FN1 "Fibronectin" species:9913 ... 203 1.3e-12 1
UNIPROTKB|J9P8M2 - symbol:FN1 "Fibronectin" species:9615 ... 202 1.5e-12 1
UNIPROTKB|F1LST1 - symbol:Fn1 "Fibronectin" species:10116... 202 1.6e-12 1
UNIPROTKB|D4AEE1 - symbol:Fn1 "Fibronectin" species:10116... 202 1.6e-12 1
UNIPROTKB|F1P6H7 - symbol:FN1 "Fibronectin" species:9615 ... 202 1.6e-12 1
UNIPROTKB|G3V7W2 - symbol:Fn1 "Fibronectin 1, isoform CRA... 202 1.7e-12 1
UNIPROTKB|F1NPJ1 - symbol:TNR "Tenascin-R" species:9031 "... 198 2.3e-12 1
UNIPROTKB|Q00546 - symbol:TNR "Tenascin-R" species:9031 "... 198 2.3e-12 1
UNIPROTKB|E1BFE2 - symbol:E1BFE2 "Uncharacterized protein... 200 2.5e-12 1
RGD|2624 - symbol:Fn1 "fibronectin 1" species:10116 "Ratt... 200 2.8e-12 1
UNIPROTKB|H0Y7Z1 - symbol:FN1 "Ugl-Y3" species:9606 "Homo... 195 3.9e-12 1
ZFIN|ZDB-GENE-030131-6545 - symbol:fn1b "fibronectin 1b" ... 198 4.7e-12 1
MGI|MGI:88448 - symbol:Col12a1 "collagen, type XII, alpha... 196 1.0e-11 1
ZFIN|ZDB-GENE-030804-1 - symbol:tnr "tenascin R (restrict... 199 1.0e-11 2
UNIPROTKB|P24821 - symbol:TNC "Tenascin" species:9606 "Ho... 193 1.5e-11 1
UNIPROTKB|Q02388 - symbol:COL7A1 "Collagen alpha-1(VII) c... 194 1.6e-11 1
UNIPROTKB|Q29116 - symbol:TNC "Tenascin" species:9823 "Su... 190 2.5e-11 1
UNIPROTKB|F1MRZ6 - symbol:TNC "Uncharacterized protein" s... 190 3.3e-11 1
UNIPROTKB|P11722 - symbol:FN1 "Fibronectin" species:9031 ... 185 6.1e-11 1
UNIPROTKB|F1NJT4 - symbol:FN1 "Fibronectin" species:9031 ... 185 6.1e-11 1
UNIPROTKB|F1SH38 - symbol:PTPRB "Uncharacterized protein"... 187 6.3e-11 1
UNIPROTKB|P13944 - symbol:COL12A1 "Collagen alpha-1(XII) ... 185 1.7e-10 1
UNIPROTKB|F1NKN1 - symbol:COL12A1 "Collagen alpha-1(XII) ... 185 1.7e-10 1
UNIPROTKB|F1NKZ3 - symbol:COL14A1 "Collagen alpha-1(XIV) ... 166 6.5e-10 2
UNIPROTKB|F1PIP7 - symbol:COL7A1 "Uncharacterized protein... 178 9.7e-10 1
UNIPROTKB|F1PGJ4 - symbol:PTPRB "Uncharacterized protein"... 176 1.2e-09 1
UNIPROTKB|F6UUL8 - symbol:PTPRB "Uncharacterized protein"... 176 1.2e-09 1
UNIPROTKB|Q99715 - symbol:COL12A1 "Collagen alpha-1(XII) ... 177 1.3e-09 1
UNIPROTKB|F1N401 - symbol:COL12A1 "Collagen alpha-1(XII) ... 186 1.7e-09 2
UNIPROTKB|J3QT52 - symbol:PTPRB "Receptor-type tyrosine-p... 173 2.2e-09 1
MGI|MGI:2665790 - symbol:Tnn "tenascin N" species:10090 "... 172 2.2e-09 1
RGD|1305922 - symbol:Ptprb "protein tyrosine phosphatase,... 173 2.3e-09 1
UNIPROTKB|F1N8A2 - symbol:PTPRB "Uncharacterized protein"... 173 2.3e-09 1
UNIPROTKB|F8VU56 - symbol:PTPRB "Receptor-type tyrosine-p... 167 1.1e-08 1
UNIPROTKB|F1N8F4 - symbol:TNC "Tenascin" species:9031 "Ga... 166 1.2e-08 1
UNIPROTKB|P10039 - symbol:TNC "Tenascin" species:9031 "Ga... 166 1.2e-08 1
UNIPROTKB|F1SKM1 - symbol:COL7A1 "Uncharacterized protein... 168 1.3e-08 1
UNIPROTKB|P32018 - symbol:COL14A1 "Collagen alpha-1(XIV) ... 166 1.3e-08 1
UNIPROTKB|P23467 - symbol:PTPRB "Receptor-type tyrosine-p... 164 2.3e-08 1
UNIPROTKB|F5H3G6 - symbol:PTPRB "Receptor-type tyrosine-p... 164 4.6e-08 1
MGI|MGI:101922 - symbol:Tnc "tenascin C" species:10090 "M... 161 5.2e-08 1
UNIPROTKB|E1B7H2 - symbol:COL7A1 "Uncharacterized protein... 159 1.2e-07 1
UNIPROTKB|Q9UQP3 - symbol:TNN "Tenascin-N" species:9606 "... 153 2.3e-07 1
UNIPROTKB|F1S285 - symbol:COL14A1 "Uncharacterized protei... 154 2.6e-07 1
ZFIN|ZDB-GENE-101108-3 - symbol:ptprb "protein tyrosine p... 154 2.7e-07 1
UNIPROTKB|Q28275 - symbol:FN1 "Fibronectin" species:9615 ... 144 4.6e-07 2
UNIPROTKB|Q05707 - symbol:COL14A1 "Collagen alpha-1(XIV) ... 151 5.5e-07 1
UNIPROTKB|E1BA17 - symbol:LOC781493 "Uncharacterized prot... 151 5.5e-07 1
UNIPROTKB|Q9P218 - symbol:COL20A1 "Collagen alpha-1(XX) c... 149 6.2e-07 1
MGI|MGI:1341272 - symbol:Col14a1 "collagen, type XIV, alp... 149 9.1e-07 1
MGI|MGI:1920618 - symbol:Col20a1 "collagen, type XX, alph... 147 1.1e-06 1
UNIPROTKB|F1LMG8 - symbol:Sned1 "Sushi, nidogen and EGF-l... 147 1.1e-06 1
RGD|1566079 - symbol:Sned1 "sushi, nidogen and EGF-like d... 147 1.1e-06 1
UNIPROTKB|B5MEF5 - symbol:SNED1 "Sushi, nidogen and EGF-l... 146 1.4e-06 1
UNIPROTKB|Q8TER0 - symbol:SNED1 "Sushi, nidogen and EGF-l... 146 1.5e-06 1
RGD|1305806 - symbol:Col14a1 "collagen, type XIV, alpha 1... 147 1.5e-06 1
UNIPROTKB|E1BB79 - symbol:E1BB79 "Uncharacterized protein... 146 1.7e-06 1
UNIPROTKB|G8JL96 - symbol:PTPRS "Receptor-type tyrosine-p... 153 1.9e-06 2
UNIPROTKB|Q13332 - symbol:PTPRS "Receptor-type tyrosine-p... 153 2.0e-06 2
UNIPROTKB|E9PDC5 - symbol:PTPRS "Receptor-type tyrosine-p... 153 2.0e-06 2
UNIPROTKB|J9P2Q4 - symbol:PTPRH "Uncharacterized protein"... 141 2.3e-06 1
UNIPROTKB|E1BP05 - symbol:USH2A "Uncharacterized protein"... 148 2.5e-06 2
ZFIN|ZDB-GENE-030131-9889 - symbol:col14a1 "collagen, typ... 145 2.6e-06 1
MGI|MGI:3045960 - symbol:Sned1 "sushi, nidogen and EGF-li... 143 3.1e-06 1
UNIPROTKB|E1B8G8 - symbol:E1B8G8 "Uncharacterized protein... 142 3.8e-06 1
UNIPROTKB|G3N3S9 - symbol:G3N3S9 "Uncharacterized protein... 142 3.8e-06 1
UNIPROTKB|Q7Z5N4 - symbol:SDK1 "Protein sidekick-1" speci... 143 5.2e-06 1
UNIPROTKB|J9NW78 - symbol:PTPRH "Uncharacterized protein"... 136 1.1e-05 1
UNIPROTKB|E1BW51 - symbol:FNDC3B "Uncharacterized protein... 136 1.5e-05 1
ZFIN|ZDB-GENE-980526-104 - symbol:tnc "tenascin C" specie... 136 2.5e-05 1
ZFIN|ZDB-GENE-070615-38 - symbol:ptprdb "protein tyrosine... 136 2.6e-05 1
UNIPROTKB|E1C6Q8 - symbol:E1C6Q8 "Uncharacterized protein... 135 3.0e-05 1
UNIPROTKB|F1N896 - symbol:PTPRS "Uncharacterized protein"... 142 3.6e-05 2
UNIPROTKB|F1N888 - symbol:PTPRS "Uncharacterized protein"... 142 3.8e-05 2
UNIPROTKB|F1NWE4 - symbol:PTPRS "Uncharacterized protein"... 142 3.8e-05 2
UNIPROTKB|Q8AV58 - symbol:SDK1 "Protein sidekick-1" speci... 134 5.0e-05 1
UNIPROTKB|I3LFJ4 - symbol:PTPRH "Uncharacterized protein"... 128 6.1e-05 1
UNIPROTKB|I3LNV5 - symbol:LOC100624894 "Uncharacterized p... 131 6.2e-05 1
ZFIN|ZDB-GENE-091118-90 - symbol:ptprh "protein tyrosine ... 96 7.5e-05 2
UNIPROTKB|I3LGE9 - symbol:PTPRS "Uncharacterized protein"... 138 7.6e-05 2
UNIPROTKB|Q9W6V5 - symbol:PTPRJ "Receptor-type tyrosine-p... 130 8.4e-05 1
UNIPROTKB|H0Y6Z7 - symbol:PTPRF "Receptor-type tyrosine-p... 130 9.4e-05 1
WARNING: Descriptions of 22 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0004370 [details] [associations]
symbol:Ptp10D "Protein tyrosine phosphatase 10D" species:7227
"Drosophila melanogaster" [GO:0005001 "transmembrane receptor
protein tyrosine phosphatase activity" evidence=ISS;NAS]
[GO:0005886 "plasma membrane" evidence=ISS;NAS] [GO:0004725
"protein tyrosine phosphatase activity" evidence=ISS;NAS;IDA]
[GO:0006470 "protein dephosphorylation" evidence=IMP;NAS;IDA]
[GO:0008045 "motor neuron axon guidance" evidence=IGI] [GO:0004728
"receptor signaling protein tyrosine phosphatase activity"
evidence=NAS] [GO:0004721 "phosphoprotein phosphatase activity"
evidence=IDA] [GO:0007616 "long-term memory" evidence=IMP]
[GO:0007424 "open tracheal system development" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0007417 "central nervous
system development" evidence=IGI] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
EMBL:AE014298 SUPFAM:SSF49265 GO:GO:0045177 GO:GO:0007616
GO:GO:0007417 GO:GO:0008045 GO:GO:0007424 eggNOG:COG5599 KO:K01104
GO:GO:0005001 GeneTree:ENSGT00700000104166 EMBL:M80465 EMBL:M80538
EMBL:BT004474 PIR:C41214 PIR:D41214 RefSeq:NP_001138187.1
RefSeq:NP_727544.2 RefSeq:NP_996413.1 RefSeq:NP_996414.1
UniGene:Dm.7386 PDB:3S3E PDB:3S3F PDB:3S3H PDB:3S3K PDBsum:3S3E
PDBsum:3S3F PDBsum:3S3H PDBsum:3S3K ProteinModelPortal:P35992
SMR:P35992 IntAct:P35992 STRING:P35992 PaxDb:P35992 PRIDE:P35992
EnsemblMetazoa:FBtr0073522 GeneID:32115 KEGG:dme:Dmel_CG1817
CTD:32115 FlyBase:FBgn0004370 InParanoid:P35992 OMA:LHSTRDD
OrthoDB:EOG483BKC ChiTaRS:Ptp10D GenomeRNAi:32115 NextBio:776913
Bgee:P35992 GermOnline:CG1817 Uniprot:P35992
Length = 1631
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/355 (67%), Positives = 275/355 (77%)
Query: 8 VHGANLVIKIPENLS-SDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYD 66
V A+L I IP N D ++YRLDY P G+P PNTT SR+I D I+FS LPGTKY+
Sbjct: 40 VRCADLAISIPNNPGLDDGASYRLDYSPPFGYPEPNTTIASREIGDEIQFSRALPGTKYN 99
Query: 67 FYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVI 126
F+LYYTN T HDWLTWT +ITT PDPP+NLSV VRSGK A I WSPP G Y+ FK+KV+
Sbjct: 100 FWLYYTNFTHHDWLTWTVTITTAPDPPSNLSVQVRSGKNAIILWSPPTQGSYTAFKIKVL 159
Query: 127 SLSEKTPPRIIGFTENPPA-GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT 185
LSE + F N +S+K+LTPG +YQVQ +++YD KESVAYTSRNFTTKPNT
Sbjct: 160 GLSEASSSYNRTFQVNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTKPNT 219
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
PGKFIVWFRNETTLLVLWQP YPA IYTHYKVSI+PPDA +SVLYVEKEGEPPGPAQAAF
Sbjct: 220 PGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAF 279
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
KGLVPGRAYNISVQT+SEDEIS PTTAQYRT+PLRPL+ T+D+ ITSNS RV+WE PKG
Sbjct: 280 KGLVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEAPKG 339
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
SEFDKYQVS+ R ST + +S + D + EPG+T+ V+VKTVSGK
Sbjct: 340 ISEFDKYQVSVATTR--RQST-VPRSNEPVAFFDFRDIAEPGKTFNVIVKTVSGK 391
Score = 211 (79.3 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 89/334 (26%), Positives = 146/334 (43%)
Query: 42 NTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW---LTWTA-SITTPPDPPTNLS 97
N T+ D E PG Y Y T++D + +T+ + TT P+ P
Sbjct: 169 NRTFQVNDNTFQHSVKELTPGATYQVQAY----TIYDGKESVAYTSRNFTTKPNTPGKFI 224
Query: 98 VNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIGFTENPP--AGYSLKDLTP 154
V R+ T + W PP +G Y+ +K+ + + PP A + K L P
Sbjct: 225 VWFRNETTLLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAFKGLVP 284
Query: 155 GGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGK--FIVWFRNETTLLVLWQPSYPASIY 212
G +Y + + ++ + + S+ T++ + T P P F F + VLW+ S +
Sbjct: 285 GRAYNISVQTMSEDEISLPTTAQ-YRTVPLRPLNVTFDRDFITSNSFRVLWEAPKGISEF 343
Query: 213 THYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV-PGRAYNISVQTVSEDEISTPTT 271
Y+VS+ +V + EP A F+ + PG+ +N+ V+TVS S P T
Sbjct: 344 DKYQVSVATTRRQSTV---PRSNEPV--AFFDFRDIAEPGKTFNVIVKTVSGKVTSWPAT 398
Query: 272 AQY--RTIPLRPL-SFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRP--GASST 326
R +P+R L S DK +N++ + WE ++ D+Y++ + G +ST
Sbjct: 399 GDVTLRPLPVRNLRSINDDK----TNTMIITWEADPASTQ-DEYRIVYHELETFNGDTST 453
Query: 327 PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+T R T E L PGR Y + V+ VS K
Sbjct: 454 -LTTDRTRFTL----ESLLPGRNYSLSVQAVSKK 482
Score = 191 (72.3 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 69/277 (24%), Positives = 117/277 (42%)
Query: 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSL 149
P+PP N+++ + + WSPP SG+++ + ++ + SE+ R+ +
Sbjct: 583 PNPPRNMTIETVRSNSVLVHWSPPESGEFTEYSIRYRTDSEQQWVRLPSVRSTEA---DI 639
Query: 150 KDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPA 209
D+T G Y +Q+ +V ES N T PN P I+ + + + W P P
Sbjct: 640 TDMTKGEKYTIQVNTVSFGVESPVPQEVNTTVPPN-PVSNIIQLVDSRNITLEW-PK-PE 696
Query: 210 SIYTHYKVSIDPPDAPESV----LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
Y + P D P V + K + + L+PG Y +QT S
Sbjct: 697 GRVESYILKWWPSDNPGRVQTKNVSENKSADDLSTVRVLIGELMPGVQYKFDIQTTSYGI 756
Query: 266 ISTPTTAQYRTIPL--RPLSFTYDKASITSNSLRVVWEP-PKGFSEFDKYQVSINVRRPG 322
+S T+ RT+PL + + +++ + + P P+ S+FD Y+ S+
Sbjct: 757 LSGITSLYPRTMPLIQSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLG----D 812
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
A K ++ + GL PGR Y + V TVSG
Sbjct: 813 AEIRDKEKLANDTDRKVTFTGLVPGRLYNITVWTVSG 849
Score = 155 (59.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 73/300 (24%), Positives = 120/300 (40%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNL-SVNVRSGKTAQIFWSPPISGKYS 119
PG ++ + + V W T +T P P NL S+N T I W +
Sbjct: 377 PGKTFNVIVKTVSGKVTSWPA-TGDVTLRPLPVRNLRSINDDKTNTMIITWEADPASTQD 435
Query: 120 GFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNF 179
+++ L T+ ++L+ L PG +Y + + +V ES TS
Sbjct: 436 EYRIVYHELETFNGDTSTLTTDR--TRFTLESLLPGRNYSLSVQAVSKKMESNE-TSIFV 492
Query: 180 TTKPNTPGKFIVWFRN-ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
T+P++P I ++ L + W+ S S Y+V + L +K E
Sbjct: 493 VTRPSSP--IIEDLKSIRMGLNISWK-SDVNSKQEQYEVLYSRNGTSD--LRTQKTKE-- 545
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
++ K L PG Y + V VS D S P P P + T + ++ SNS+ V
Sbjct: 546 --SRLVIKNLQPGAGYELKVFAVSHDLRSEPHAYFQAVYPNPPRNMTIE--TVRSNSVLV 601
Query: 299 VWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
W PP+ EF +Y + R + + T+ D+++ + G Y + V TVS
Sbjct: 602 HWSPPES-GEFTEYSIRY---RTDSEQQWVRLPSVRSTEADITD-MTKGEKYTIQVNTVS 656
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 74/312 (23%), Positives = 139/312 (44%)
Query: 58 EGL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVN--VRSGKTAQIFWSPPI 114
+GL PG Y+ + T S L TA T P P N++ + + + ++ W P
Sbjct: 280 KGLVPGRAYNISVQ-TMSEDEISLPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEAPK 338
Query: 115 S-GKYSGFKLKVISLS-EKTPPRIIGFTENPPAGYSLKDLT-PGGSYQVQLFSVYDSKES 171
++ +++ V + + T PR + P A + +D+ PG ++ V + +V S
Sbjct: 339 GISEFDKYQVSVATTRRQSTVPR----SNEPVAFFDFRDIAEPGKTFNVIVKTVSGKVTS 394
Query: 172 VAYTSRNFTTKPNTPGKFIVWFRNE--TTLLVLWQPSYPASIYTHYKV---SIDPPDAPE 226
T + T +P P + + ++ T+++ W+ PAS Y++ ++ +
Sbjct: 395 WPATG-DVTLRP-LPVRNLRSINDDKTNTMIITWEAD-PASTQDEYRIVYHELETFNGDT 451
Query: 227 SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTY 286
S L ++ + + L+PGR Y++SVQ VS+ S T+ T P P+
Sbjct: 452 STLTTDR-------TRFTLESLLPGRNYSLSVQAVSKKMESNETSIFVVTRPSSPI--IE 502
Query: 287 DKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEP 346
D SI L + W+ S+ ++Y+V + R G S K+++ + + L+P
Sbjct: 503 DLKSIRMG-LNISWKSDVN-SKQEQYEVLYS--RNGTSDLRTQKTKESRL---VIKNLQP 555
Query: 347 GRTYQVLVKTVS 358
G Y++ V VS
Sbjct: 556 GAGYELKVFAVS 567
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 75/312 (24%), Positives = 125/312 (40%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
G KY + + V + + T PP+P +N+ + + + + W P G+ +
Sbjct: 645 GEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSNI-IQLVDSRNITLEWPKP-EGRVESY 702
Query: 122 KLKVISLSEKTPPRIIGFTENPPAG------YSLKDLTPGGSYQVQLFSV-YDSKESVAY 174
LK + +EN A + +L PG Y+ + + Y +
Sbjct: 703 ILKWWPSDNPGRVQTKNVSENKSADDLSTVRVLIGELMPGVQYKFDIQTTSYGILSGI-- 760
Query: 175 TSRNFTTKPNTPGKFIVWFRNET----TLLVLWQPS-YPASIYTHYKVSIDPPDAPESVL 229
TS T P +V + T+ + + P+ +S + Y+ S+ + +
Sbjct: 761 TSLYPRTMPLIQSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLGDAEIRDK-- 818
Query: 230 YVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKA 289
EK + F GLVPGR YNI+V TVS S P Q R P P++ +
Sbjct: 819 --EKLANDTD-RKVTFTGLVPGRLYNITVWTVSGGVASLPIQRQDRLYP-EPITQLH-AT 873
Query: 290 SITSNSLRVVWEPPKG-FSEFD-KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPG 347
+IT + + W+ PKG +++FD Y + N+ ++ R+E T D L P
Sbjct: 874 NITDTEISLRWDLPKGEYNDFDIAYLTADNLLAQNMTT------RNEITISD----LRPH 923
Query: 348 RTYQVLVKTVSG 359
R Y V SG
Sbjct: 924 RNYTFTVVVRSG 935
>FB|FBgn0004368 [details] [associations]
symbol:Ptp4E "Protein tyrosine phosphatase 4E" species:7227
"Drosophila melanogaster" [GO:0005001 "transmembrane receptor
protein tyrosine phosphatase activity" evidence=ISS] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISS;NAS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA;NAS] [GO:0007417 "central
nervous system development" evidence=IGI] [GO:0008045 "motor neuron
axon guidance" evidence=IGI] [GO:0030424 "axon" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0007424 "open
tracheal system development" evidence=IGI] [GO:0016324 "apical
plasma membrane" evidence=IDA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
GO:GO:0030424 GO:GO:0043025 SUPFAM:SSF49265 GO:GO:0007417
GO:GO:0008045 GO:GO:0007424 GO:GO:0005001 HSSP:P18052 EMBL:L20894
PIR:A49502 ProteinModelPortal:Q24495 SMR:Q24495 STRING:Q24495
PRIDE:Q24495 FlyBase:FBgn0004368 InParanoid:Q24495
OrthoDB:EOG4TMPGV ChiTaRS:Ptp4E ArrayExpress:Q24495 Bgee:Q24495
Uniprot:Q24495
Length = 1767
Score = 1073 (382.8 bits), Expect = 1.4e-107, P = 1.4e-107
Identities = 213/359 (59%), Positives = 262/359 (72%)
Query: 1 MYIIVHGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL 60
+++ H + A+LVI +P S+ N+ YR+DY G P PNTT + DI +I+ S L
Sbjct: 63 IFLARHA-NAADLVINVPNASSNANAFYRIDYSAPFGFPEPNTTIPASDIGKDIKNSRAL 121
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG 120
PGT+Y+F+LYYTNST + LTWT +ITT PDPP NLSV +RS K+A I W PP SG+YSG
Sbjct: 122 PGTEYNFWLYYTNSTHREQLTWTVNITTAPDPPANLSVQLRSSKSAFITWRPPGSGRYSG 181
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++V+ L++ R N S K+LTPGGSYQVQ +SVY KESVAYTSRNFT
Sbjct: 182 FRIRVLGLTDLPFERSYSLEGNETLQLSAKELTPGGSYQVQAYSVYQGKESVAYTSRNFT 241
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
TKPNTPGKFIVWFRNETTLLVLWQP +PA IYTHY+VSI P DA +SVLYVE+EGEPPGP
Sbjct: 242 TKPNTPGKFIVWFRNETTLLVLWQPPFPAGIYTHYRVSITPDDAIQSVLYVEREGEPPGP 301
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEIST-PTTAQYRTIPLRPLSFTYDKASITSNSLRVV 299
AQAAFKGLVPGR YNISVQTVSEDE S+ PTTA+Y T L+ T+D+A TS+S RV
Sbjct: 302 AQAAFKGLVPGREYNISVQTVSEDETSSVPTTARYLTYRSAWLNVTFDEAYTTSSSFRVR 361
Query: 300 WEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
WEPP+ +SEFD YQV ++ R + P + D D S+ LEPGRTY+V+VKT++
Sbjct: 362 WEPPRTYSEFDAYQVMLSTSRR-IFNVPRAANGDS-VYFDYSDILEPGRTYEVVVKTIA 418
Score = 178 (67.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 75/315 (23%), Positives = 131/315 (41%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI-SGKYS 119
PG Y Y + + TT P+ P V R+ T + W PP +G Y+
Sbjct: 215 PGGSYQVQAYSVYQGKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPPFPAGIYT 274
Query: 120 GFKLKVISLSEKTPPRIIGFTEN---PP--AGYSLKDLTPGGSYQVQLFSVY-DSKESVA 173
++ +S++ + + + E PP A + K L PG Y + + +V D SV
Sbjct: 275 HYR---VSITPDDAIQSVLYVEREGEPPGPAQAAFKGLVPGREYNISVQTVSEDETSSVP 331
Query: 174 YTSRNFTTKPNTPG-KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVE 232
T+R T + F + ++ V W+P S + Y+V + + V
Sbjct: 332 TTARYLTYRSAWLNVTFDEAYTTSSSFRVRWEPPRTYSEFDAYQVMLS---TSRRIFNVP 388
Query: 233 KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQY--RTIPLRPLS-FTYDKA 289
+ L PGR Y + V+T++++ S P + + R P+R L F D+
Sbjct: 389 RAANGDSVYFDYSDILEPGRTYEVVVKTIADNVNSWPASGEVTLRPRPVRSLGGFLDDR- 447
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP--ITKSRDEPTQCDMSE----G 343
SN+L + WEP + + D Y++S + + AS P + + +++E
Sbjct: 448 ---SNALHISWEPAETGRQ-DSYRISYH-EQTNASEVPAPFPVAAESQITTNLTEYTLDS 502
Query: 344 LEPGRTYQVLVKTVS 358
L GR Y + V+ +S
Sbjct: 503 LLAGRRYLIAVQALS 517
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 75/282 (26%), Positives = 111/282 (39%)
Query: 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTP-PRIIGFTENPPAGYS 148
P PP NL++ + W P +S + ++ ++ +P RI G EN
Sbjct: 620 PKPPQNLTLQTVHTNLVVLHWQAPEGSDFSEYVVRY--RTDASPWQRISGLHENEAR--- 674
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW-QPSY 207
+KD+ G Y VQ+ +V ES N T P P +V + L + W +P
Sbjct: 675 IKDMHYGERYLVQVNTVSFGVESPHPLELNVTMPPQ-PVSNVVPLVDSRNLTLEWPRPDG 733
Query: 208 PASIYTHYKVSIDPPDAPE--SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
YT D D E +V +E P + + L PGR Y VQ S
Sbjct: 734 HVDFYTLKWWPTDEEDRVEFKNVTQLEDLSSPS--VRIPIEDLSPGRQYRFEVQASSNGI 791
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSN---SLRVVWEP-PKGFSEFDKYQVSINVRRP 321
S T RT+PL A ++ + + P P + FD Y+ S+
Sbjct: 792 RSGTTHLSTRTMPLIQSDVFIANAGHEQGQDETITLSYTPTPADSTRFDIYRFSMG---- 847
Query: 322 GASSTPITKSRDE---PTQCDMS-EGLEPGRTYQVLVKTVSG 359
P K +++ T+ +S GL PG+ Y V V TVSG
Sbjct: 848 ----DPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVSG 885
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 69/290 (23%), Positives = 121/290 (41%)
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE--- 141
++T PP P +N+ V + + + W P G + LK E+ T+
Sbjct: 704 NVTMPPQPVSNV-VPLVDSRNLTLEWPRP-DGHVDFYTLKWWPTDEEDRVEFKNVTQLED 761
Query: 142 --NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN---- 195
+P ++DL+PG Y+ F V S + + + +T+ + V+ N
Sbjct: 762 LSSPSVRIPIEDLSPGRQYR---FEVQASSNGIRSGTTHLSTRTMPLIQSDVFIANAGHE 818
Query: 196 ---ETTLLVLWQPSYPASI--YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVP 250
+ T+ + + P+ PA + Y+ S+ P + EK + +F GL P
Sbjct: 819 QGQDETITLSYTPT-PADSTRFDIYRFSMGDPTIKDK----EKLANDT-ERKLSFSGLTP 872
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG-FSEF 309
G+ YN++V TVS S P YR PL P+S + + + + W P G +++F
Sbjct: 873 GKLYNVTVWTVSGGVASLPVQRVYRLHPL-PIS-DLKAIQVAAREITLHWTAPAGEYTDF 930
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ +S + P +TK+ T+ + +GL P Y V SG
Sbjct: 931 ELQYLSADEEAPQLLQN-VTKN----TEITL-QGLRPYHNYTFTVVVRSG 974
>MGI|MGI:97809 [details] [associations]
symbol:Ptprb "protein tyrosine phosphatase, receptor type, B"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IMP;IDA] [GO:0004721 "phosphoprotein phosphatase activity"
evidence=IEA] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016311 "dephosphorylation" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016791
"phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 MGI:MGI:97809 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0001525 GO:GO:0004725
GO:GO:0035335 EMBL:CH466539 eggNOG:COG5599
GeneTree:ENSGT00700000104166 CTD:5787 HOGENOM:HOG000060224
HOVERGEN:HBG053759 KO:K05694 OMA:FTVNCSW EMBL:AY077755
EMBL:AK147439 EMBL:AK147668 EMBL:BC141006 EMBL:BC145111
IPI:IPI00229935 RefSeq:NP_084204.2 UniGene:Mm.37213
UniGene:Mm.489025 ProteinModelPortal:B2RU80 SMR:B2RU80
MINT:MINT-247274 STRING:B2RU80 PhosphoSite:B2RU80 PaxDb:B2RU80
PRIDE:B2RU80 Ensembl:ENSMUST00000092167 GeneID:19263 KEGG:mmu:19263
UCSC:uc007hbv.2 InParanoid:Q3UGZ7 NextBio:296128 Bgee:B2RU80
Genevestigator:B2RU80 Uniprot:B2RU80
Length = 1998
Score = 222 (83.2 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 89/319 (27%), Positives = 143/319 (44%)
Query: 46 VSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT--TPPDPPTNLSVNVRSG 103
+S+D K+ F++ +PG Y T +++ L ++SI T P T+L VN G
Sbjct: 514 LSKDAKE-FTFTDLMPGRNYKA----TVTSMSGDLKQSSSIKGRTVPAQVTDLHVN-NQG 567
Query: 104 KTAQIF--WSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161
T+ +F W+ + G ++ V+ + E + + + + YS + L PG Y V
Sbjct: 568 MTSSLFTNWTKAL-GDVEFYQ--VLLIHENVVVKNESVSSDT-SRYSFRALKPGSLYSVV 623
Query: 162 LFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP 221
+ +V S + T + G + L V W P+ P + HY VS+
Sbjct: 624 VTTVSGGISSRQVVAEGRTVPSSVSGVTVNNSGRNDYLSVSWLPA-PGEV-DHYVVSLSH 681
Query: 222 PDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
+ L + K ++ +F L PGR YN++V T S + S T + RT+P +
Sbjct: 682 EGKVDQFLIIAKS-----VSECSFSSLTPGRLYNVTVTTKSGNYASHSFTEE-RTVPDKV 735
Query: 282 LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS 341
+ S S+ L+V W G +FD Y+V+I R + I KS +E C+
Sbjct: 736 QGISVSN-SARSDYLKVSWVHATG--DFDHYEVTIKNRESFIQTKTIPKSENE---CEFI 789
Query: 342 EGLEPGRTYQVLVKTVSGK 360
E L PGR Y V V T SG+
Sbjct: 790 E-LVPGRLYSVTVSTKSGQ 807
Score = 171 (65.3 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 49/167 (29%), Positives = 84/167 (50%)
Query: 194 RNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGR 252
RN T +L W P+ + + Y++ + P+ + + EK+ + F+GLVPGR
Sbjct: 1185 RNTTDSLWFSWSPA--SGDFDFYELILYNPNGTKKENWKEKD-----VTEWRFQGLVPGR 1237
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y + V T S D +S T + RT P P ++ A + + SL + W+ P +++++ +
Sbjct: 1238 KYTLYVVTHSGD-LSNKVTGEGRTAPSPPSLLSF--ADVANTSLAITWKGPPDWTDYNDF 1294
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++ PG + T ++ + GL PGR+YQ VKTVSG
Sbjct: 1295 ELQWF---PGDALTIFNPYSSRKSEGRIVYGLHPGRSYQFSVKTVSG 1338
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 82/320 (25%), Positives = 133/320 (41%)
Query: 42 NTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVR 101
NTT + ++ E +PG +Y+ + + + + + T P L V
Sbjct: 422 NTTVGKEETHYALDGLELIPGRQYEIEVIVESGNLRN--SERCQGRTVPLAVLQLRVKHA 479
Query: 102 SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161
+ + I W P+ G++ + +ISL ++ I ++ DL PG +Y+
Sbjct: 480 NETSLGITWRAPL-GEWEKY---IISLMDRELLVIHKSLSKDAKEFTFTDLMPGRNYKAT 535
Query: 162 LFSVY-DSKESVAYTSRNFTTKPNTPGKFIVWFRNETT-LLVLWQPSYPASIYTHYKVSI 219
+ S+ D K+S + R T P V + T+ L W + + Y+V +
Sbjct: 536 VTSMSGDLKQSSSIKGR---TVPAQVTDLHVNNQGMTSSLFTNWTKALGDVEF--YQVLL 590
Query: 220 DPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPL 279
E+V+ V+ E ++ +F+ L PG Y++ V TVS S A+ RT+P
Sbjct: 591 ----IHENVV-VKNESVSSDTSRYSFRALKPGSLYSVVVTTVSGGISSRQVVAEGRTVPS 645
Query: 280 RPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCD 339
T + + ++ L V W P G E D Y VS++ I KS E C
Sbjct: 646 SVSGVTVNNSG-RNDYLSVSWLPAPG--EVDHYVVSLSHEGKVDQFLIIAKSVSE---CS 699
Query: 340 MSEGLEPGRTYQVLVKTVSG 359
S L PGR Y V V T SG
Sbjct: 700 FSS-LTPGRLYNVTVTTKSG 718
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 64/259 (24%), Positives = 114/259 (44%)
Query: 83 TASITTPPDPPTNLSVNVR--SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFT 140
T + T P PP VN + T Q+ W+P SGK S +++++ + + +
Sbjct: 104 TLVLQTDPLPPARFEVNREKTASTTLQVRWTPS-SGKVSWYEVQLFDHNNQKIQEVQVQE 162
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNTPGKFIVWFRNETTL 199
+ Y+ +LT G SY+V + +V K S Y N +T P+ P K + N +L
Sbjct: 163 STTWSQYTFLNLTEGNSYKVAITAVSGEKRSFPVYI--NGSTVPS-PVKDLGISPNPNSL 219
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
L+ W S + Y++ + A V++ AF L PG YN+++
Sbjct: 220 LISW--SRGSGNVEQYRLVLMDKGAIVQDTNVDRRD-----TSYAFHELTPGHLYNLTIV 272
Query: 260 TVSEDEISTPTTAQYRTIPLRP--LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
T++ + RT P+ L T D +TS L V W+ P G + D Y ++++
Sbjct: 273 TMASG-LQNSRWKLVRTAPMEVSNLKVTND-GRLTS--LNVKWQKPPG--DVDSYSITLS 326
Query: 318 ----VRRPGASSTPITKSR 332
++ + P+T+++
Sbjct: 327 HQGTIKESKTLAPPVTETQ 345
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 73/310 (23%), Positives = 128/310 (41%)
Query: 51 KDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFW 110
++ EF E +PG Y + T S ++ + + T P+P +L++ RS + + W
Sbjct: 783 ENECEFIELVPGRLYSVTVS-TKSGQYE-ASEQGTGRTIPEPVKDLTLLNRSTEDLHVTW 840
Query: 111 SPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE 170
S +G ++++++ K P I N Y LTPG Y++ + ++ +
Sbjct: 841 SRA-NGDVDQYEVQLLFNDMKVFPHI--HLVNTATEYKFTALTPGRHYKILVLTISGDVQ 897
Query: 171 SVAYTSRNFTTKPNTPGKFIVWFRNETT-LLVLWQPSYPASIYTHYKVSIDPPDAPESVL 229
A+ T P+T + T L+V W P Y VS D
Sbjct: 898 QSAFIEG--LTVPSTVKNIHISANGATDRLMVTWSPG--GGDVDSYVVSAFRQDEK---- 949
Query: 230 YVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKA 289
V+ + P ++ F L G Y I++ +VS + A +T+P A
Sbjct: 950 -VDSQTIPKHASEHTFHRLEAGAKYRIAIVSVS-GSLRNQIDALGQTVPASVQGVVAANA 1007
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+SNSL V W+ G +E +Y + + + G + + S + E L PG+
Sbjct: 1008 -YSSNSLTVSWQKALGVAE--RYDILL-LNENGLLLSNV--SEPATARQHKFEDLTPGKK 1061
Query: 350 YQVLVKTVSG 359
Y++ + TVSG
Sbjct: 1062 YKMQILTVSG 1071
Score = 152 (58.6 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 67/277 (24%), Positives = 121/277 (43%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
+T P P +L ++ I WS SG ++L ++ + +
Sbjct: 201 STVPSPVKDLGISPNPNSLL-ISWSRG-SGNVEQYRLVLMDKGAIVQDTNV---DRRDTS 255
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE-TTLLVLWQP 205
Y+ +LTPG Y + + ++ ++ + + T P V T+L V WQ
Sbjct: 256 YAFHELTPGHLYNLTIVTMASGLQNSRW--KLVRTAPMEVSNLKVTNDGRLTSLNVKWQK 313
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
P + + Y +++ + + + K PP + FK LVPGR Y +++ +S E
Sbjct: 314 P-PGDVDS-YSITL----SHQGTIKESKTLAPP-VTETQFKDLVPGRLYQVTISCIS-GE 365
Query: 266 ISTPTTAQYRTIPLRPLSF-TYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS 324
+S +A RT+P + + +Y++ I S V W PP G +++ Y++ +
Sbjct: 366 LSAEKSAAGRTVPEKVRNLVSYNE--IWMKSFTVNWTPPAG--DWEHYRIVLFNESLVLL 421
Query: 325 STPITKSRDEPTQCDMSEGLE--PGRTYQVLVKTVSG 359
+T + K E T + +GLE PGR Y++ V SG
Sbjct: 422 NTTVGK---EETHYAL-DGLELIPGRQYEIEVIVESG 454
Score = 126 (49.4 bits), Expect = 0.00034, P = 0.00034
Identities = 68/312 (21%), Positives = 122/312 (39%)
Query: 55 EFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF--WSP 112
+F+ PG Y + + V + +T P N+ ++ +G T ++ WSP
Sbjct: 875 KFTALTPGRHYKILVLTISGDVQQ-SAFIEGLTVP-STVKNIHISA-NGATDRLMVTWSP 931
Query: 113 PISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV 172
G + + EK + I + ++ L G Y++ + SV S +
Sbjct: 932 G-GGDVDSYVVSAFRQDEKVDSQTI---PKHASEHTFHRLEAGAKYRIAIVSVSGSLRN- 986
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVE 232
+ T + G + +L V WQ + + Y + + E+ L +
Sbjct: 987 QIDALGQTVPASVQGVVAANAYSSNSLTVSWQKAL--GVAERYDILL----LNENGLLLS 1040
Query: 233 KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASIT 292
EP Q F+ L PG+ Y + + TVS S + A+ RT+P + IT
Sbjct: 1041 NVSEPATARQHKFEDLTPGKKYKMQILTVSGGLFSKESQAEGRTVPAAVTNLR-----IT 1095
Query: 293 SNSLRVV---WEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGR 348
NS R + W +G E Y + + P T +++ +P S + L GR
Sbjct: 1096 ENSSRYLSFGWTASEG--ELSWYNIFLY--NP--DRTLQERAQVDPLVQSFSFQNLLQGR 1149
Query: 349 TYQVLVKTVSGK 360
Y++++ T SG+
Sbjct: 1150 MYKMVIVTHSGE 1161
>UNIPROTKB|E1BKN2 [details] [associations]
symbol:TNR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072534 "perineuronal net" evidence=IEA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA] [GO:0051968
"positive regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IEA] [GO:0050805 "negative regulation of synaptic
transmission" evidence=IEA] [GO:0048692 "negative regulation of
axon extension involved in regeneration" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0035641 "locomotory exploration
behavior" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0022408 "negative regulation of
cell-cell adhesion" evidence=IEA] [GO:0022029 "telencephalon cell
migration" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008306 "associative learning" evidence=IEA] [GO:0007158
"neuron cell-cell adhesion" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
INTERPRO:IPR002181 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0060291
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0030198 GO:GO:0050885
GO:GO:0050808 GO:GO:0051968 GO:GO:0045121 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0008306 PROSITE:PS01186 GO:GO:0050805
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 GO:GO:0007158 InterPro:IPR013111 Pfam:PF07974
GO:GO:0022408 GO:GO:0035641 GO:GO:0022029 GO:GO:0072534 KO:K06252
GeneTree:ENSGT00690000102056 CTD:7143 OMA:KACPCAS GO:GO:0048692
EMBL:DAAA02043371 EMBL:DAAA02043372 EMBL:DAAA02043373
EMBL:DAAA02043374 EMBL:DAAA02043375 EMBL:DAAA02043376
IPI:IPI00700648 RefSeq:NP_001192857.1 UniGene:Bt.88153
Ensembl:ENSBTAT00000015545 GeneID:526409 KEGG:bta:526409
NextBio:20874363 Uniprot:E1BKN2
Length = 1358
Score = 216 (81.1 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 92/315 (29%), Positives = 133/315 (42%)
Query: 52 DNIEFSE-GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF 109
D F++ GL PG +Y + T +AS++T D PT++ V S A +
Sbjct: 465 DVTSFNQTGLKPGEEYIVNVVALKEQARSPPT-SASVSTVIDGPTHILVRDVSDTVAFVE 523
Query: 110 WSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166
W+PP K LK V KT R+ + P + YS++ L PG Y+V + +V
Sbjct: 524 WTPP-RAKVDFILLKYGLVGGEGGKTTFRL----QPPLSQYSVQALRPGSRYEVWVSAVR 578
Query: 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE 226
+ ES A T+ FTT+ + P V R T+L + W S A + YKV +
Sbjct: 579 GTNESEA-TATQFTTEIDAPKNLRVGSRTATSLELEWDNS-EAEVQ-EYKVEYSTLAGEQ 635
Query: 227 -SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFT 285
L V K P ++A LVPG Y I + + + S P T RT P
Sbjct: 636 YHELLVPKTIGPT--SRATLTDLVPGTEYGIGISAIMNSQQSVPATMNARTELDSPRDLM 693
Query: 286 YDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLE 345
+S TS SL +W G D Y+++ AS + K R T D LE
Sbjct: 694 VTASSETSISL--IWTKASG--PIDHYRITFTPSSGIASEVTVPKDRTSYTLTD----LE 745
Query: 346 PGRTYQVLVKTVSGK 360
PG Y + + G+
Sbjct: 746 PGAEYIISITAERGR 760
Score = 149 (57.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 75/349 (21%), Positives = 140/349 (40%)
Query: 19 ENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDI--KDNIEFSEGLPGTKYDFYLYYTNSTV 76
+N ++ Y+++Y G + V + I ++ +PGT+Y + ++
Sbjct: 615 DNSEAEVQEYKVEYSTLAGEQY-HELLVPKTIGPTSRATLTDLVPGTEYGIGISAIMNSQ 673
Query: 77 HDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRI 136
+ T + T D P +L V S + + W+ SG +++ TP
Sbjct: 674 QS-VPATMNARTELDSPRDLMVTASSETSISLIWTKA-SGPIDHYRITF------TPSSG 725
Query: 137 IGFTENPP---AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT-KPNTPGKFIVW 192
I P Y+L DL PG Y + + + ++S+ T FT +P + F
Sbjct: 726 IASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHLHFS-- 783
Query: 193 FRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
+++ + W PS PA ++ P D E ++ V + A GL P
Sbjct: 784 HVTSSSVNITWSDPSPPAD---RLILNYSPRDEEEEMMEVSLDATK---RHAVLMGLQPA 837
Query: 252 RAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDK 311
Y +++ V S P T P T +++T +S+ V W PP + FD
Sbjct: 838 TEYIVNLVAVHGTVSSEPIVGSITTGIDPPKDITI--SNVTKDSVMVSWSPP--VASFDY 893
Query: 312 YQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
Y+VS + G + + + T+ +++ L P Y++ + +V G+
Sbjct: 894 YRVSYRPTQVGRLDSSVVPNT--VTEFTITK-LYPATEYEISLNSVRGR 939
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 67/276 (24%), Positives = 120/276 (43%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISG-----KYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
PP +L V S ++ ++ W P++ Y L + L ++ P +G
Sbjct: 328 PPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPTALGGLQLQQRVP--------GDWSG 379
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
++ +L PG +Y + +++V + S+ T++ T +TP ETT+ V W+P
Sbjct: 380 VTISELEPGLTYNISVYAVISNILSLPITAK-VATHLSTPQGLRFKTITETTVEVQWEP- 437
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK-GLVPGRAYNISVQTVSEDE 265
+ S + +++S P + V+ + P + + GL PG Y ++V + E
Sbjct: 438 FSFS-FDGWEISFIPKNNEGGVI-----AQLPSDVTSFNQTGLKPGEEYIVNVVALKEQA 491
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVV-WEPPKGFSEFDKYQVSINVRRPGAS 324
S PT+A T+ P T+ S+++ V W PP+ +F + + V G
Sbjct: 492 RSPPTSASVSTVIDGP---THILVRDVSDTVAFVEWTPPRAKVDFILLKYGL-VGGEGGK 547
Query: 325 STPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSG 359
+T R +P S + L PG Y+V V V G
Sbjct: 548 TT----FRLQPPLSQYSVQALRPGSRYEVWVSAVRG 579
Score = 139 (54.0 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 64/304 (21%), Positives = 117/304 (38%)
Query: 54 IEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPP 113
+ SE PG Y+ +Y S + L TA + T P L + T ++ W P
Sbjct: 380 VTISELEPGLTYNISVYAVISNILS-LPITAKVATHLSTPQGLRFKTITETTVEVQWEP- 437
Query: 114 ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVA 173
S + G+++ I + + +I + ++ L PG Y V + ++ + S
Sbjct: 438 FSFSFDGWEISFIPKNNEGG--VIAQLPSDVTSFNQTGLKPGEEYIVNVVALKEQARSPP 495
Query: 174 YTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK 233
TS + +T + P +V ++T V W P + K + + ++ ++
Sbjct: 496 -TSASVSTVIDGPTHILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQ- 553
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
PP +Q + + L PG Y + V V S T Q+ T P + S T+
Sbjct: 554 ---PP-LSQYSVQALRPGSRYEVWVSAVRGTNESEATATQFTTEIDAPKNLRV--GSRTA 607
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353
SL + W+ + +E +Y+V + + PT L PG Y +
Sbjct: 608 TSLELEWDNSE--AEVQEYKVEYSTLAGEQYHELLVPKTIGPTSRATLTDLVPGTEYGIG 665
Query: 354 VKTV 357
+ +
Sbjct: 666 ISAI 669
Score = 138 (53.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 60/257 (23%), Positives = 106/257 (41%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGK 117
GL P T+Y L + TV SITT DPP +++++ + + + WSPP++
Sbjct: 833 GLQPATEYIVNLVAVHGTVSSEPI-VGSITTGIDPPKDITISNVTKDSVMVSWSPPVAS- 890
Query: 118 YSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
F +S R+ N +++ L P Y++ L SV +ES +
Sbjct: 891 ---FDYYRVSYRPTQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICT 947
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP-PDAPESVLYVEKEG 235
T N P T L+ W+ P S +Y + + A E++L V+ +
Sbjct: 948 LVHTAMDN-PADLTATNITPTEALLQWKA--PMSEVENYVIVLTHFAVAGETIL-VDGDS 1003
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
E + L+P Y +++ S S + + T+ P + T + +T S
Sbjct: 1004 E-----EFQLVDLLPRTHYTVTMYATSGPLTSGTVSTNFSTLLDAPANLT--ASEVTRQS 1056
Query: 296 LRVVWEPPKGFSEFDKY 312
+ W+PP+ +E + Y
Sbjct: 1057 ALISWQPPR--AEIENY 1071
Score = 44 (20.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 43 TTYVSRDIKDNIEFSEGLPG-TKYDFYL 69
T + RD+ D + F E P K DF L
Sbjct: 508 THILVRDVSDTVAFVEWTPPRAKVDFIL 535
>UNIPROTKB|F1SS24 [details] [associations]
symbol:FN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0042060 "wound healing" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0018149
"peptide cross-linking" evidence=IEA] [GO:0016504 "peptidase
activator activity" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IEA] [GO:0007161 "calcium-independent
cell-matrix adhesion" evidence=IEA] [GO:0007044 "cell-substrate
junction assembly" evidence=IEA] [GO:0005793 "endoplasmic
reticulum-Golgi intermediate compartment" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005577 "fibrinogen complex"
evidence=IEA] InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039
Pfam:PF00041 PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091
SMART:SM00058 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0005577 GO:GO:0016504
GO:GO:0042060 GO:GO:0034446 GO:GO:0005604 GO:GO:0005793
GO:GO:0018149 InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GeneTree:ENSGT00700000104067 GO:GO:0007044 CTD:2335
KO:K05717 OMA:IPGHLNS GO:GO:0007161 EMBL:CU861921
RefSeq:XP_003133690.1 UniGene:Ssc.16743 Ensembl:ENSSSCT00000017610
GeneID:397620 KEGG:ssc:397620 ArrayExpress:F1SS24 Uniprot:F1SS24
Length = 2478
Score = 214 (80.4 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 87/349 (24%), Positives = 152/349 (43%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 744 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGEQS 801
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 802 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 859
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT---KPNT--PGKFIVWFR 194
E + +L DL PG Y + +++V +++ES + TT +P+ P K + +
Sbjct: 860 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRPDKVPPPKDLQFVE 918
Query: 195 -NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
+ + ++W P P S T Y+V + P + P + G+ ++ F GL P
Sbjct: 919 VTDVKVTIMWTP--PESPVTGYRVDVIPVNLPG------EHGQRLPISRNTFAEVTGLSP 970
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y+ V V++ S P TAQ T P + + + T +++ V W PP+ +
Sbjct: 971 GVTYHFKVFAVNQGRESKPLTAQQTTKLDAPTNLQF--INETDSTVMVTWTPPR--ARIA 1026
Query: 311 KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
Y++++ + R G P + + L+PG Y V + V G
Sbjct: 1027 GYRLTVGLTRGGQ---PKQYNVGPSASQYLLRNLQPGSEYAVTLVAVKG 1072
Score = 205 (77.2 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 85/306 (27%), Positives = 132/306 (43%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T+S V TTP P T+ SV + + + W S SG
Sbjct: 694 TRFDFTTTSTSSAVTS--NTVVGETTPFSPVVATSESVTEITASSFVVSWVSA-SDTVSG 750
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 751 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGEQSLILSTSQT 809
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 810 TAPDAPPDPTVDQVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPET 862
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLRPLSFTYDK----ASITS 293
A + L PG YNI++ V E++ STP Q T +P RP K +T
Sbjct: 863 ANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVP-RPDKVPPPKDLQFVEVTD 921
Query: 294 NSLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+ ++W PP+ S Y+V I V PG + SR+ T +++ GL PG TY
Sbjct: 922 VKVTIMWTPPE--SPVTGYRVDVIPVNLPGEHGQRLPISRN--TFAEVT-GLSPGVTYHF 976
Query: 353 LVKTVS 358
V V+
Sbjct: 977 KVFAVN 982
Score = 205 (77.2 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 91/342 (26%), Positives = 144/342 (42%)
Query: 28 YRLDYIPA-----HGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLT 81
YR+D IP HG P +SR+ + GL PG Y F ++ N +
Sbjct: 938 YRVDVIPVNLPGEHGQRLP----ISRNTFAEVT---GLSPGVTYHFKVFAVNQG-RESKP 989
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
TA TT D PTNL + T + W+PP + +G++L V L+ P+ +
Sbjct: 990 LTAQQTTKLDAPTNLQFINETDSTVMVTWTPP-RARIAGYRLTV-GLTRGGQPK--QYNV 1045
Query: 142 NPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN--ETT 198
P A Y L++L PG Y V L +V +++S T T +P G + ETT
Sbjct: 1046 GPSASQYLLRNLQPGSEYAVTLVAVKGNQQSPRATGVFTTLQP--VGSIPPYNTEVTETT 1103
Query: 199 LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
+++ W P+ P +K+ + P E+ V + GL PG Y ++
Sbjct: 1104 IVITWTPA-PR---IGFKLGVRPSQGGEAPREVTSDS-----GSIVVSGLTPGVEYVYTI 1154
Query: 259 QTVSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
+ + E TP + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1155 SVLRDGQERDTPIVKKVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITTT 1212
Query: 318 VR--RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G S + + + + C E L PG Y V V TV
Sbjct: 1213 PTNGQQGYSLEEVVHA--DQSSCTF-ENLSPGLEYNVSVYTV 1251
Score = 195 (73.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 86/352 (24%), Positives = 144/352 (40%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y
Sbjct: 1192 LTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVY-- 1249
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
+ +D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1250 -TVKNDKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPINSSTIIGYRITVVAAGE 1308
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1309 GIPI-FEDFADSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1366
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P SI T++ V P E V E P A L+
Sbjct: 1367 FTNVGPDTIRVTWAP--PPSIELTNFLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLL 1421
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG Y +SV +V E S P + +T P D + IT+NS V W P+ +
Sbjct: 1422 PGTEYLVSVSSVYEQHESIPLRGRQKTGLDSPTGI--DFSDITANSFTVYWIAPR--ATI 1477
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y++ + G P + R P++ ++ L PG Y V + V+G+
Sbjct: 1478 TGYKIRHHPEHMGGR--P-REDRVPPSRNSITLTNLIPGVEYVVSIVAVNGR 1526
Score = 175 (66.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 77/308 (25%), Positives = 125/308 (40%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 1328 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNVGPDTIRVTWAPPPSI 1385
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ + F ++ + + + + + A L +L PG Y V + SVY+ ES+
Sbjct: 1386 ELTNFLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRG 1444
Query: 177 RNFTTKPNTPGKFIVWFRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
R T + G + F + T + V W P + T YK+ PE + +E
Sbjct: 1445 RQKTGLDSPTG---IDFSDITANSFTVYWIA--PRATITGYKIR----HHPEHMGGRPRE 1495
Query: 235 GE-PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
PP L+PG Y +S+ V+ E S P Q T+ P + T
Sbjct: 1496 DRVPPSRNSITLTNLIPGVEYVVSIVAVNGREESPPLVGQQSTVSDVPRDLQV--IATTP 1553
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQV 352
SL + W+ P + Y+++ G +S P+ + ++ + GL+PG Y +
Sbjct: 1554 TSLLISWDAPAVTVRY--YRITYG--ETGGNS-PVQEFTVPGSKSTATISGLKPGVDYTI 1608
Query: 353 LVKTVSGK 360
V V+G+
Sbjct: 1609 TVYAVTGR 1616
Score = 166 (63.5 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 86/350 (24%), Positives = 148/350 (42%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D +++ +GL PG++Y +
Sbjct: 1740 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGEEDTAELQGLRPGSEYTVSVVA 1796
Query: 72 TNSTVHDW-LTWTASITTPPDPPTNLSVN--VRSGKTAQIFWSPPISGKYSGFKLKVISL 128
+ + L T S P PTNL + TAQ W+ P + + +G++++V
Sbjct: 1797 LHDDMESQPLIGTQSTAIPA--PTNLKFTQVTPTSLTAQ--WTAP-NVQLTGYRVRVTP- 1850
Query: 129 SEKTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT-- 185
EKT P + I + + + L Y+V ++++ D+ S TT N
Sbjct: 1851 KEKTGPMKEINLAPDS-SSVVVSGLMVATKYEVSIYALKDTLTSRP-AQGVVTTLENVSP 1908
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
P + V ETT+ + W+ T ++V P + + K P
Sbjct: 1909 PRRARVTDATETTITISWRTK--TETITGFQVDAVPANGQTPIQRTIK----PDVRSYTI 1962
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
GL PG Y I + T++++ S+P T P + + + T NSL V W+PP+
Sbjct: 1963 TGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR- 2019
Query: 306 FSEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
++ Y I +PG+ + + R T+ ++ GLEP Y + V
Sbjct: 2020 -AKITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPATEYTIQV 2065
Score = 158 (60.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 62/258 (24%), Positives = 102/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1844 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSIYALKDTLTSRPA-QGVVT 1901
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ + + +TP I T P
Sbjct: 1902 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAVPANGQTP---IQRTIKPDV 1957
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1958 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 2016
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL P Y I V + +
Sbjct: 2017 P--PRAKITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPATEYTIQVIALKNN 2071
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + RT L L
Sbjct: 2072 QKSEPLIGRKRTDELPQL 2089
Score = 154 (59.3 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 71/268 (26%), Positives = 106/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1093 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1143
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E + T + P + +T +L V W+ S
Sbjct: 1144 LTPGVEYVYTISVLRDGQERDTPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1203
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + Y +E + F+ L PG YN+SV TV D+ S P
Sbjct: 1204 I-TGYRITTTPTNGQQG--YSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKNDKESVPI 1260
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P IT +S+ + W P S Y++++ G PI +
Sbjct: 1261 SDTI--IPEVPQLTDLSFVDITDSSIGLRWTPINS-STIIGYRITVVAAGEGI---PIFE 1314
Query: 331 S-RDEPTQCDMSEGLEPGRTYQVLVKTV 357
D GLEPG Y + V T+
Sbjct: 1315 DFADSSVGYYTVTGLEPGIDYDISVITL 1342
Score = 142 (55.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 77/344 (22%), Positives = 124/344 (36%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P T V D E + EGL P +Y +Y N
Sbjct: 1658 SSHVTGYRVTTTPKNGSGPSKTKTVG---PDQTEMTIEGLQPTVEYVVSVYAQNQNGESQ 1714
Query: 80 -LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIG 138
L TA T D P L+ + +I W P G+ S +++ S E +
Sbjct: 1715 PLVQTA--VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFP 1770
Query: 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETT 198
+ L+ L PG Y V + +++D ES T P P T+
Sbjct: 1771 APDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTAIP-APTNLKFTQVTPTS 1829
Query: 199 LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
L W + P T Y+V + P + + + P + GL+ Y +S+
Sbjct: 1830 LTAQW--TAPNVQLTGYRVRVTPKEKTGPMKEINLA---PDSSSVVVSGLMVATKYEVSI 1884
Query: 259 QTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+ + S P T+ P R T T ++ + W +QV
Sbjct: 1885 YALKDTLTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQV 1938
Query: 315 SINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P TPI ++ + GL+PG Y++ + T++
Sbjct: 1939 DAV---PANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLN 1979
Score = 43 (20.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKT 356
+ W P F E +Y +S + G P+ + R T + GL G TY ++V+
Sbjct: 2213 ISWTP---FQESSEYIISCHP--VGIDEEPL-QFRVPGTSASATLTGLTRGATYNIIVEA 2266
Query: 357 V 357
+
Sbjct: 2267 L 2267
>UNIPROTKB|F1S706 [details] [associations]
symbol:TNR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072534 "perineuronal net" evidence=IEA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA] [GO:0051968
"positive regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IEA] [GO:0050805 "negative regulation of synaptic
transmission" evidence=IEA] [GO:0048692 "negative regulation of
axon extension involved in regeneration" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0035641 "locomotory exploration
behavior" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0022408 "negative regulation of
cell-cell adhesion" evidence=IEA] [GO:0022029 "telencephalon cell
migration" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008306 "associative learning" evidence=IEA] [GO:0007158
"neuron cell-cell adhesion" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181 GO:GO:0005634
GO:GO:0005737 GO:GO:0007165 GO:GO:0009986 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0060291 SUPFAM:SSF49265 GO:GO:0005578
GO:GO:0030198 GO:GO:0050885 GO:GO:0050808 GO:GO:0051968
GO:GO:0045121 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0008306
PROSITE:PS01186 GO:GO:0050805 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 GO:GO:0007158 InterPro:IPR013111
Pfam:PF07974 GO:GO:0022408 GO:GO:0035641 GO:GO:0022029
GO:GO:0072534 KO:K06252 GeneTree:ENSGT00690000102056 CTD:7143
OMA:KACPCAS GO:GO:0048692 EMBL:CU694502 RefSeq:XP_003130376.1
Ensembl:ENSSSCT00000016895 GeneID:100520686 KEGG:ssc:100520686
Uniprot:F1S706
Length = 1358
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 91/315 (28%), Positives = 132/315 (41%)
Query: 52 DNIEFSE-GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF 109
D F++ GL PG +Y + T +AS++T D PT + V S A +
Sbjct: 465 DVTSFNQTGLKPGEEYIVNVVALKEQARSPPT-SASVSTVIDGPTQILVRDVSDTVAFVE 523
Query: 110 WSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166
W+PP K L+ V KT R+ + P + YS++ L PG YQV + +V
Sbjct: 524 WTPP-RAKVDFILLRYGLVGGEGGKTTFRL----QPPLSQYSVQALRPGSQYQVWVSAVR 578
Query: 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE 226
+ ES + T++ FTT+ + P V R T+L + W S A + YKV +
Sbjct: 579 GTNESESTTTQ-FTTEIDAPKNLRVGSRTATSLDLEWDNS-EAEVQ-EYKVVYSTLAGEQ 635
Query: 227 -SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFT 285
L V K P +A LVPG Y + + V + S P T RT P
Sbjct: 636 YHELMVPKSIGPT--TRATLTDLVPGTEYGVGISAVMSSQQSVPATMNARTELDSPRDLM 693
Query: 286 YDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLE 345
+S TS SL +W G D Y+++ AS + K R T D LE
Sbjct: 694 VTASSETSISL--IWTKASG--PIDHYRITFTPSSGIASEVTVPKDRTSYTLTD----LE 745
Query: 346 PGRTYQVLVKTVSGK 360
PG Y + + G+
Sbjct: 746 PGAEYIISITAERGR 760
Score = 149 (57.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 68/275 (24%), Positives = 116/275 (42%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISG-----KYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
PP +L V S ++ ++ W P++ Y L + L ++ P +G
Sbjct: 328 PPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPTALGGLQLQQRVP--------GDWSG 379
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
++ +L PG +Y + +++V + S+ T++ T +TP ETT+ V W+P
Sbjct: 380 VTISELEPGLTYNISVYAVISNILSLPITAK-VATHLSTPQGLRFKTITETTVEVQWEP- 437
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK-GLVPGRAYNISVQTVSEDE 265
+ S + +++S P + V+ + P + + GL PG Y ++V + E
Sbjct: 438 FSFS-FDGWEISFIPKNNEGGVI-----AQLPSDVTSFNQTGLKPGEEYIVNVVALKEQA 491
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASS 325
S PT+A T+ P S T V W PP+ +F + + V G +
Sbjct: 492 RSPPTSASVSTVIDGPTQILVRDVSDTVAF--VEWTPPRAKVDFILLRYGL-VGGEGGKT 548
Query: 326 TPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSG 359
T R +P S + L PG YQV V V G
Sbjct: 549 T----FRLQPPLSQYSVQALRPGSQYQVWVSAVRG 579
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 67/305 (21%), Positives = 125/305 (40%)
Query: 54 IEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPP 113
+ SE PG Y+ +Y S + L TA + T P L + T ++ W P
Sbjct: 380 VTISELEPGLTYNISVYAVISNILS-LPITAKVATHLSTPQGLRFKTITETTVEVQWEP- 437
Query: 114 ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVA 173
S + G+++ I + + +I + ++ L PG Y V + ++ + S
Sbjct: 438 FSFSFDGWEISFIPKNNEGG--VIAQLPSDVTSFNQTGLKPGEEYIVNVVALKEQARSPP 495
Query: 174 YTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK 233
TS + +T + P + +V ++T V W P + + + + ++ ++
Sbjct: 496 -TSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLRYGLVGGEGGKTTFRLQ- 553
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
PP +Q + + L PG Y + V V S TT Q+ T P + S T+
Sbjct: 554 ---PP-LSQYSVQALRPGSQYQVWVSAVRGTNESESTTTQFTTEIDAPKNLRV--GSRTA 607
Query: 294 NSLRVVWEPPKGFSEFDKYQVSIN-VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
SL + W+ + +E +Y+V + + + KS T+ +++ L PG Y V
Sbjct: 608 TSLDLEWDNSE--AEVQEYKVVYSTLAGEQYHELMVPKSIGPTTRATLTD-LVPGTEYGV 664
Query: 353 LVKTV 357
+ V
Sbjct: 665 GISAV 669
Score = 144 (55.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 69/306 (22%), Positives = 123/306 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
+PGT+Y + S+ + T + T D P +L V S + + W+ SG
Sbjct: 657 VPGTEYGVGISAVMSSQQS-VPATMNARTELDSPRDLMVTASSETSISLIWTKA-SGPID 714
Query: 120 GFKLKVISLSEKTPPRIIGFTENPP---AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+++ TP I P Y+L DL PG Y + + + ++S+ T
Sbjct: 715 HYRITF------TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTV 768
Query: 177 RNFTT-KPNTPGKFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
FT +P + F +++ + W PS PA ++ P D E ++ V +
Sbjct: 769 DAFTGFRPISHLHFS--HVTSSSVNITWSDPSPPAD---RLILNYSPRDEEEEMMEVSLD 823
Query: 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSN 294
A L P Y +++ V S P T P T +++T +
Sbjct: 824 ATK---RHAVLTDLQPATEYIVNLVAVHGTVTSEPIVGSITTGIDPPKDITI--SNVTKD 878
Query: 295 SLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
S+ V W PP + FD Y+VS + G + + + T+ +++ L P Y++ +
Sbjct: 879 SVMVSWSPP--VASFDYYRVSYRPTQVGRLDSSVVPNT--VTEFTITK-LYPATEYEISL 933
Query: 355 KTVSGK 360
+V G+
Sbjct: 934 NSVRGR 939
Score = 135 (52.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 58/254 (22%), Positives = 104/254 (40%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG 120
P T+Y L + TV SITT DPP +++++ + + + WSPP++
Sbjct: 836 PATEYIVNLVAVHGTVTSEPI-VGSITTGIDPPKDITISNVTKDSVMVSWSPPVAS---- 890
Query: 121 FKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNF 179
F +S R+ N +++ L P Y++ L SV +ES +
Sbjct: 891 FDYYRVSYRPTQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICTLVH 950
Query: 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP-PDAPESVLYVEKEGEPP 238
T N P T L+ W+ P I +Y + + A E++L V+ + E
Sbjct: 951 TAMDN-PVDLTATNITPTEALLHWRA--PVGIVENYVIVLTHFAVAGETIL-VDGDSE-- 1004
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
+ L+P Y +++ S S + + T+ P + T + +T S +
Sbjct: 1005 ---EFQLVDLLPRTHYTVTMYAASGPLTSGTISTNFSTLLDAPANLT--ASEVTRQSALI 1059
Query: 299 VWEPPKGFSEFDKY 312
W+PP+ +E + Y
Sbjct: 1060 SWQPPR--AEIENY 1071
Score = 45 (20.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 43 TTYVSRDIKDNIEFSEGLPG-TKYDFYL 69
T + RD+ D + F E P K DF L
Sbjct: 508 TQILVRDVSDTVAFVEWTPPRAKVDFIL 535
>UNIPROTKB|Q92752 [details] [associations]
symbol:TNR "Tenascin-R" species:9606 "Homo sapiens"
[GO:0007158 "neuron cell-cell adhesion" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0022029 "telencephalon cell migration"
evidence=IEA] [GO:0022408 "negative regulation of cell-cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0035641 "locomotory exploration
behavior" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
[GO:0048692 "negative regulation of axon extension involved in
regeneration" evidence=IEA] [GO:0050805 "negative regulation of
synaptic transmission" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0051968 "positive regulation
of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA] [GO:0072534
"perineuronal net" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0007411 "axon guidance"
evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060
INTERPRO:IPR002181 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0007165 GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0060291 SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0030198
GO:GO:0050885 GO:GO:0007155 GO:GO:0050808 GO:GO:0051968
GO:GO:0045121 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0008306
PROSITE:PS01186 GO:GO:0050805 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 GO:GO:0007158
InterPro:IPR013111 Pfam:PF07974 GO:GO:0022408 GO:GO:0035641
GO:GO:0022029 GO:GO:0072534 HOVERGEN:HBG008949 KO:K06252
HOGENOM:HOG000234355 CTD:7143 eggNOG:NOG311251 OrthoDB:EOG42FSGP
EMBL:Z67996 EMBL:X98085 EMBL:AL021919 EMBL:AL023285 EMBL:AL136530
EMBL:Z94057 EMBL:Z94055 IPI:IPI00160552 IPI:IPI00554760
RefSeq:NP_003276.3 UniGene:Hs.659864 ProteinModelPortal:Q92752
SMR:Q92752 IntAct:Q92752 STRING:Q92752 PhosphoSite:Q92752
DMDM:311033534 PaxDb:Q92752 PRIDE:Q92752 Ensembl:ENST00000263525
Ensembl:ENST00000367674 GeneID:7143 KEGG:hsa:7143 UCSC:uc001gkp.1
GeneCards:GC01M175291 H-InvDB:HIX0028854 HGNC:HGNC:11953
HPA:CAB022343 HPA:HPA027134 HPA:HPA027150 HPA:HPA029859 MIM:601995
neXtProt:NX_Q92752 PharmGKB:PA36642 InParanoid:Q92752 OMA:KACPCAS
GenomeRNAi:7143 NextBio:27961 ArrayExpress:Q92752 Bgee:Q92752
CleanEx:HS_TNR Genevestigator:Q92752 GermOnline:ENSG00000116147
GO:GO:0048692 Uniprot:Q92752
Length = 1358
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 90/312 (28%), Positives = 127/312 (40%)
Query: 52 DNIEFSE-GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF 109
D F++ GL PG +Y + T +AS++T D PT + V S A +
Sbjct: 465 DVTSFNQTGLKPGEEYIVNVVALKEQARSPPT-SASVSTVIDGPTQILVRDVSDTVAFVE 523
Query: 110 WSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG-YSLKDLTPGGSYQVQLFSVYDS 168
W PP K LK L R F PP YS++ L PG Y+V + +V +
Sbjct: 524 WIPP-RAKVDFILLKY-GLVGGEGGRTT-FRLQPPLSQYSVQALRPGSRYEVSVSAVRGT 580
Query: 169 KESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESV 228
ES + T++ FTT+ + P V R T+L + W S A + YKV +
Sbjct: 581 NESDSATTQ-FTTEIDAPKNLRVGSRTATSLDLEWDNS-EAEVQ-EYKVVYSTLAGEQYH 637
Query: 229 LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDK 288
+ G P +A LVPG Y + + V + S P T RT P
Sbjct: 638 EVLVPRGIGP-TTRATLTDLVPGTEYGVGISAVMNSQQSVPATMNARTELDSPRDLMVTA 696
Query: 289 ASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGR 348
+S TS SL +W G D Y+++ AS + K R T D LEPG
Sbjct: 697 SSETSISL--IWTKASG--PIDHYRITFTPSSGIASEVTVPKDRTSYTLTD----LEPGA 748
Query: 349 TYQVLVKTVSGK 360
Y + V G+
Sbjct: 749 EYIISVTAERGR 760
Score = 148 (57.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 69/306 (22%), Positives = 123/306 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
+PGT+Y + ++ + T + T D P +L V S + + W+ SG
Sbjct: 657 VPGTEYGVGISAVMNSQQS-VPATMNARTELDSPRDLMVTASSETSISLIWTKA-SGPID 714
Query: 120 GFKLKVISLSEKTPPRIIGFTENPP---AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+++ TP I P Y+L DL PG Y + + + ++S+ T
Sbjct: 715 HYRITF------TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISVTAERGRQQSLESTV 768
Query: 177 RNFTT-KPNTPGKFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
FT +P + F +++ + W PS PA ++ P D E ++ V +
Sbjct: 769 DAFTGFRPISHLHFS--HVTSSSVNITWSDPSPPAD---RLILNYSPRDEEEEMMEVSLD 823
Query: 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSN 294
A GL P Y +++ V S P T P T +++T +
Sbjct: 824 ATK---RHAVLMGLQPATEYIVNLVAVHGTVTSEPIVGSITTGIDPPKDITI--SNVTKD 878
Query: 295 SLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
S+ V W PP + FD Y+VS + G + + + T+ ++ L P Y++ +
Sbjct: 879 SVMVSWSPP--VASFDYYRVSYRPTQVGRLDSSVVPNT--VTEFTITR-LNPATEYEISL 933
Query: 355 KTVSGK 360
+V G+
Sbjct: 934 NSVRGR 939
Score = 143 (55.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 67/275 (24%), Positives = 116/275 (42%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISG-----KYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
PP +L V S ++ ++ W P++ Y L + L ++ P +G
Sbjct: 328 PPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPTALGGLQLQQRVP--------GDWSG 379
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
++ +L PG +Y + +++V + S+ T++ T +TP ETT+ V W+P
Sbjct: 380 VTITELEPGLTYNISVYAVISNILSLPITAK-VATHLSTPQGLQFKTITETTVEVQWEP- 437
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK-GLVPGRAYNISVQTVSEDE 265
+ S + +++S P + V+ + P + + GL PG Y ++V + E
Sbjct: 438 FSFS-FDGWEISFIPKNNEGGVI-----AQVPSDVTSFNQTGLKPGEEYIVNVVALKEQA 491
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASS 325
S PT+A T+ P S T V W PP+ +F + + V G +
Sbjct: 492 RSPPTSASVSTVIDGPTQILVRDVSDTVAF--VEWIPPRAKVDFILLKYGL-VGGEGGRT 548
Query: 326 TPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSG 359
T R +P S + L PG Y+V V V G
Sbjct: 549 T----FRLQPPLSQYSVQALRPGSRYEVSVSAVRG 579
Score = 141 (54.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 68/305 (22%), Positives = 120/305 (39%)
Query: 54 IEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPP 113
+ +E PG Y+ +Y S + L TA + T P L + T ++ W P
Sbjct: 380 VTITELEPGLTYNISVYAVISNILS-LPITAKVATHLSTPQGLQFKTITETTVEVQWEP- 437
Query: 114 ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVA 173
S + G+++ I + + +I + ++ L PG Y V + ++ + S
Sbjct: 438 FSFSFDGWEISFIPKNNEGG--VIAQVPSDVTSFNQTGLKPGEEYIVNVVALKEQARSPP 495
Query: 174 YTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK 233
TS + +T + P + +V ++T V W P + K + + + ++
Sbjct: 496 -TSASVSTVIDGPTQILVRDVSDTVAFVEWIPPRAKVDFILLKYGLVGGEGGRTTFRLQ- 553
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
PP +Q + + L PG Y +SV V S T Q+ T P + S T+
Sbjct: 554 ---PP-LSQYSVQALRPGSRYEVSVSAVRGTNESDSATTQFTTEIDAPKNLRV--GSRTA 607
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRD-EPTQCDMSEGLEPGRTYQV 352
SL + W+ + +E +Y+V + G + R PT L PG Y V
Sbjct: 608 TSLDLEWDNSE--AEVQEYKVVYSTLA-GEQYHEVLVPRGIGPTTRATLTDLVPGTEYGV 664
Query: 353 LVKTV 357
+ V
Sbjct: 665 GISAV 669
Score = 126 (49.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 59/257 (22%), Positives = 104/257 (40%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGK 117
GL P T+Y L + TV SITT DPP +++++ + + + WSPP++
Sbjct: 833 GLQPATEYIVNLVAVHGTVTSEPI-VGSITTGIDPPKDITISNVTKDSVMVSWSPPVAS- 890
Query: 118 YSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
F +S R+ N +++ L P Y++ L SV +ES +
Sbjct: 891 ---FDYYRVSYRPTQVGRLDSSVVPNTVTEFTITRLNPATEYEISLNSVRGREESERICT 947
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP-PDAPESVLYVEKEG 235
T N P I T L+ W+ P +Y + + A E++L V+
Sbjct: 948 LVHTAMDN-PVDLIATNITPTEALLQWKA--PVGEVENYVIVLTHFAVAGETIL-VDGVS 1003
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
E + L+P Y ++ + S + + T+ P + T + +T S
Sbjct: 1004 E-----EFRLVDLLPSTHYTATMYATNGPLTSGTISTNFSTLLDPPANLT--ASEVTRQS 1056
Query: 296 LRVVWEPPKGFSEFDKY 312
+ W+PP+ +E + Y
Sbjct: 1057 ALISWQPPR--AEIENY 1071
Score = 48 (22.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 43 TTYVSRDIKDNIEFSEGLPG-TKYDFYL 69
T + RD+ D + F E +P K DF L
Sbjct: 508 TQILVRDVSDTVAFVEWIPPRAKVDFIL 535
>MGI|MGI:95566 [details] [associations]
symbol:Fn1 "fibronectin 1" species:10090 "Mus musculus"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001775 "cell
activation" evidence=ISO] [GO:0002020 "protease binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005577
"fibrinogen complex" evidence=ISO] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA;TAS] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005793 "endoplasmic reticulum-Golgi intermediate
compartment" evidence=ISO] [GO:0006953 "acute-phase response"
evidence=IEA] [GO:0007044 "cell-substrate junction assembly"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0007160
"cell-matrix adhesion" evidence=ISO;IDA] [GO:0007161
"calcium-independent cell-matrix adhesion" evidence=IDA]
[GO:0008201 "heparin binding" evidence=IEA] [GO:0008347 "glial cell
migration" evidence=ISO] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0010952 "positive regulation of peptidase
activity" evidence=IDA] [GO:0016324 "apical plasma membrane"
evidence=IDA] [GO:0016504 "peptidase activator activity"
evidence=IDA] [GO:0018149 "peptide cross-linking" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042060 "wound healing" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0045340 "mercury
ion binding" evidence=ISO] [GO:0050921 "positive regulation of
chemotaxis" evidence=ISO] [GO:0071288 "cellular response to mercury
ion" evidence=ISO] [GO:0071347 "cellular response to interleukin-1"
evidence=ISO] InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039
Pfam:PF00041 PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091
SMART:SM00058 SMART:SM00060 MGI:MGI:95566 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0008360 GO:GO:0016324 SUPFAM:SSF49265
GO:GO:0006953 GO:GO:0008201 GO:GO:0016504 GO:GO:0001525
PROSITE:PS00022 EMBL:CH466548 eggNOG:NOG12793 GO:GO:0042060
GO:GO:0005604 InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GeneTree:ENSGT00700000104067 HOGENOM:HOG000234344
HOVERGEN:HBG005731 GO:GO:0007044 CTD:2335 KO:K05717 OMA:IPGHLNS
ChiTaRS:FN1 GO:GO:0007161 EMBL:AC124821 EMBL:BC051082 EMBL:Z22729
EMBL:X82402 EMBL:X93167 EMBL:M18194 EMBL:S45680 IPI:IPI00113539
PIR:A49173 PIR:I48349 RefSeq:NP_034363.1 UniGene:Mm.193099 PDB:1MFN
PDB:2MFN PDBsum:1MFN PDBsum:2MFN ProteinModelPortal:P11276
IntAct:P11276 MINT:MINT-202764 STRING:P11276 PhosphoSite:P11276
PaxDb:P11276 PRIDE:P11276 Ensembl:ENSMUST00000055226 GeneID:14268
KEGG:mmu:14268 UCSC:uc007bju.1 InParanoid:P11276
EvolutionaryTrace:P11276 NextBio:285629 CleanEx:MM_FN1
Genevestigator:P11276 GermOnline:ENSMUSG00000026193 Uniprot:P11276
Length = 2477
Score = 207 (77.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 89/353 (25%), Positives = 140/353 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y
Sbjct: 1190 LTVSWERSTTPDITGYRITTTPTNGQQGTSLEEVVHADQSSCTFENLNPGLEYNVSVYTV 1249
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1250 KD---DKESAPISDTVVPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1306
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1307 GIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1364
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P SI T+ V P E V E P A L+
Sbjct: 1365 FTNIGPDTMRVTWAP--PPSIELTNLLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLL 1419
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG--FS 307
PG Y +SV +V E S P + +T P F D + IT+NS V W P+
Sbjct: 1420 PGTEYLVSVSSVYEQHESIPLRGRQKTGLDSPTGF--DSSDITANSFTVHWVAPRAPITG 1477
Query: 308 EFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ +V RP P SR+ T + L PG Y V + V+G+
Sbjct: 1478 YIIRHHAEHSVGRPRQDRVP--PSRNSITLTN----LNPGTEYVVSIIAVNGR 1524
Score = 197 (74.4 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 86/347 (24%), Positives = 142/347 (40%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 742 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGKQS 799
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 800 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 857
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKP---NTPGKFIVWF-- 193
E + +L DL PG Y + +++V +++ES + + T P N P + F
Sbjct: 858 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGTPRSDNVPPPTDLQFVE 916
Query: 194 RNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ-AAFKGLVPGR 252
+ + ++W P P S+ + Y+V + P P + P A GL PG
Sbjct: 917 LTDVKVTIMWTP--PDSVVSGYRVEVLPVSLPGE----HGQRLPVNRNTFAEITGLSPGV 970
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y V V + S P TAQ T P + + + T ++ V W PP+ + Y
Sbjct: 971 TYLFKVFAVHQGRESNPLTAQQTTKLDAPTNLQF--VNETDRTVLVTWTPPR--ARIAGY 1026
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+++ + R G P + L+PG Y V + V G
Sbjct: 1027 RLTAGLTRGGQ---PKQYNVGPLASKYPLRNLQPGSEYTVTLVAVKG 1070
Score = 194 (73.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 91/344 (26%), Positives = 146/344 (42%)
Query: 26 STYRLDYIPA-----HGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDW 79
S YR++ +P HG P V+R+ I GL PG Y F ++ + +
Sbjct: 934 SGYRVEVLPVSLPGEHGQRLP----VNRNTFAEIT---GLSPGVTYLFKVFAVHQG-RES 985
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
TA TT D PTNL + +T + W+PP + +G++L L+ P+ +
Sbjct: 986 NPLTAQQTTKLDAPTNLQFVNETDRTVLVTWTPP-RARIAGYRLTA-GLTRGGQPK--QY 1041
Query: 140 TENPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE-- 196
P A Y L++L PG Y V L +V +++S T FTT P + I + E
Sbjct: 1042 NVGPLASKYPLRNLQPGSEYTVTLVAVKGNQQSPKATGV-FTTLQ--PLRSIPPYNTEVT 1098
Query: 197 -TTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
TT+++ W P+ P +K+ + P E+ V + GL PG Y
Sbjct: 1099 ETTIVITWTPA-PR---IGFKLGVRPSQGGEAPREVTSDS-----GSIVVSGLTPGVEYT 1149
Query: 256 ISVQTVSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
++Q + + E P + T PL P + + +A+ + L V WE + Y++
Sbjct: 1150 YTIQVLRDGQERDAPIVNRVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRI 1207
Query: 315 SINVRRPGASSTPITKS-RDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G T + + + + C E L PG Y V V TV
Sbjct: 1208 TTTPTN-GQQGTSLEEVVHADQSSCTF-ENLNPGLEYNVSVYTV 1249
Score = 172 (65.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 75/297 (25%), Positives = 124/297 (41%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF + + +T T P P T+ SV + + + W S SG
Sbjct: 693 TRFDFTTSASTPVTSNTVTGE---TAPYSPVVATSESVTEITASSFVVSWVSA-SDTVSG 748
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + + S + T
Sbjct: 749 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGKQSLILSTSQT 807
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 808 TAPDAPPDPTVDQVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPET 860
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRTI--PLR---PLSFTYDKASITSN 294
A + L PG YNI++ V E++ STP Q T P P +T
Sbjct: 861 ANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGTPRSDNVPPPTDLQFVELTDV 920
Query: 295 SLRVVWEPPKGFSEFDKYQVSI-NVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTY 350
+ ++W PP S Y+V + V PG + +R+ T +++ GL PG TY
Sbjct: 921 KVTIMWTPPD--SVVSGYRVEVLPVSLPGEHGQRLPVNRN--TFAEIT-GLSPGVTY 972
Score = 162 (62.1 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 73/305 (23%), Positives = 121/305 (39%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 1326 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNIGPDTMRVTWAPPPSI 1383
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ + ++ + + + + + A L +L PG Y V + SVY+ ES+
Sbjct: 1384 ELTNLLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRG 1442
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE 236
R T ++P F + V W P + T Y + A SV ++
Sbjct: 1443 RQ-KTGLDSPTGFDSSDITANSFTVHWVA--PRAPITGYIIR---HHAEHSVGRPRQDRV 1496
Query: 237 PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
PP L PG Y +S+ V+ E S P Q T+ P + + T SL
Sbjct: 1497 PPSRNSITLTNLNPGTEYVVSIIAVNGREESPPLIGQQATVSDIPRDL--EVIASTPTSL 1554
Query: 297 RVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVK 355
+ WEPP + Y+++ G +S P+ + ++ + ++PG Y + +
Sbjct: 1555 LISWEPPAVSVRY--YRITYG--ETGGNS-PVQEFTVPGSKSTATINNIKPGADYTITLY 1609
Query: 356 TVSGK 360
V+G+
Sbjct: 1610 AVTGR 1614
Score = 162 (62.1 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 86/349 (24%), Positives = 146/349 (41%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + D +D+ +GL PG++Y +
Sbjct: 1738 IKIAWESPQGQVSRYRVTYSSPEDGI---RELFPAPDGEDDTAELQGLRPGSEYTVSVVA 1794
Query: 72 TNSTVHDWLTWTASITTPPDPPTNLSVN--VRSGKTAQIFWSPPISGKYSGFKLKVISLS 129
+ + T P PTNL + + TAQ W P S + +G++++V +
Sbjct: 1795 LHDDMESQPLIGIQSTAIP-APTNLKFSQVTPTSFTAQ--WIAP-SVQLTGYRVRV-NPK 1849
Query: 130 EKTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--P 186
EKT P + I + + + + L Y+V ++++ D+ S TT N P
Sbjct: 1850 EKTGPMKEINLSPDS-SSVIVSGLMVATKYEVSVYALKDTLTSRP-AQGVITTLENVSPP 1907
Query: 187 GKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK 246
+ V ETT+ + W+ T ++V P + V + P
Sbjct: 1908 RRARVTDATETTITISWRTK--TETITGFQVDAIPANGQTPV----QRSISPDVRSYTIT 1961
Query: 247 GLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGF 306
GL PG Y I + T++++ S+P T P + + + T NSL V W+ P+
Sbjct: 1962 GLQPGTDYKIHLYTLNDNARSSPVIIDASTAIDAPSNLRF--LTTTPNSLLVSWQAPR-- 2017
Query: 307 SEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
+ Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 2018 ARITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIYV 2063
Score = 151 (58.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 73/270 (27%), Positives = 109/270 (40%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1091 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1141
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E A T + P + +T +L V W+ S
Sbjct: 1142 LTPGVEYTYTIQVLRDGQERDAPIVNRVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1201
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + +E + F+ L PG YN+SV TV +D+ S P
Sbjct: 1202 I-TGYRITTTPTNGQQGTSL--EEVVHADQSSCTFENLNPGLEYNVSVYTVKDDKESAPI 1258
Query: 271 T-AQYRTIP-LRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPI 328
+ +P L LSF IT +S+ + W P S Y++++ G PI
Sbjct: 1259 SDTVVPEVPQLTDLSFV----DITDSSIGLRWTPLNS-STIIGYRITVVAAGEGI---PI 1310
Query: 329 TKSR-DEPTQCDMSEGLEPGRTYQVLVKTV 357
+ D GLEPG Y + V T+
Sbjct: 1311 FEDFVDSSVGYYTVTGLEPGIDYDISVITL 1340
Score = 148 (57.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 62/258 (24%), Positives = 103/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P +S D ++ S + TKY+ +Y T+ IT
Sbjct: 1842 YRVRVNPKEKTGPMKEINLSPD-SSSVIVSGLMVATKYEVSVYALKDTLTSRPA-QGVIT 1899
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + +TP + + +P
Sbjct: 1900 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQTP---VQRSISPDV 1955
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1956 RSYTITGLQPGTDYKIHLYTLNDNARSSPVII-DASTAIDAPSNLRFLTTTPNSLLVSWQ 2014
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 2015 A--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIYVIALKNN 2069
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 2070 QKSEPLIGRKKTDELPQL 2087
Score = 133 (51.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 75/338 (22%), Positives = 121/338 (35%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW-LTWTA 84
YR+ P +G P T S D E + EGL P +Y +Y N L TA
Sbjct: 1662 YRVTTTPKNGLGPSKTKTAS---PDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTA 1718
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P L+ + +I W P G+ S +++ S E + +
Sbjct: 1719 --VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIRELFPAPDGED 1774
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
L+ L PG Y V + +++D ES T P P T+ W
Sbjct: 1775 DTAELQGLRPGSEYTVSVVALHDDMESQPLIGIQSTAIP-APTNLKFSQVTPTSFTAQWI 1833
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P+ T Y+V ++P + + + P + GL+ Y +SV + +
Sbjct: 1834 A--PSVQLTGYRVRVNPKEKTGPMKEINLS---PDSSSVIVSGLMVATKYEVSVYALKDT 1888
Query: 265 EISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
S P T+ P R T T ++ + W +QV
Sbjct: 1889 LTSRPAQGVITTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQVDAI--- 1939
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P TP+ +S + GL+PG Y++ + T++
Sbjct: 1940 PANGQTPVQRSISPDVRSYTITGLQPGTDYKIHLYTLN 1977
Score = 126 (49.4 bits), Expect = 0.00043, P = 0.00043
Identities = 72/332 (21%), Positives = 122/332 (36%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY-YTNSTVHDWLTWTASI 86
YR+ Y G+ P V K + PG Y LY T + SI
Sbjct: 1568 YRITYGETGGNSPVQEFTVPGS-KSTATINNIKPGADYTITLYAVTGRGDSPASSKPVSI 1626
Query: 87 T--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P+ + V + + W P S +G+++ + P + T +P
Sbjct: 1627 NYKTEIDKPSQMQVTDVQDNSISVRWLPSTS-PVTGYRVTTTPKNGLGPSKTK--TASPD 1683
Query: 145 -AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+++ L P Y V +++ + ES + T + P + ++ + W
Sbjct: 1684 QTEMTIEGLQPTVEYVVSVYAQNRNGESQPLV-QTAVTNIDRPKGLAFTDVDVDSIKIAW 1742
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
+ P + Y+V+ P+ L+ +GE A +GL PG Y +SV + +
Sbjct: 1743 ES--PQGQVSRYRVTYSSPEDGIRELFPAPDGEDD---TAELQGLRPGSEYTVSVVALHD 1797
Query: 264 DEISTPTTA-QYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
D S P Q IP P + + + +T S W P + Y+V +N +
Sbjct: 1798 DMESQPLIGIQSTAIPA-PTNLKFSQ--VTPTSFTAQWIAPS--VQLTGYRVRVNPKEKT 1852
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
I S D + + GL Y+V V
Sbjct: 1853 GPMKEINLSPDSSSV--IVSGLMVATKYEVSV 1882
>UNIPROTKB|F1NJT3 [details] [associations]
symbol:FN1 "Fibronectin" species:9031 "Gallus gallus"
[GO:0005577 "fibrinogen complex" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005793 "endoplasmic
reticulum-Golgi intermediate compartment" evidence=IEA] [GO:0007044
"cell-substrate junction assembly" evidence=IEA] [GO:0007161
"calcium-independent cell-matrix adhesion" evidence=IEA]
[GO:0016324 "apical plasma membrane" evidence=IEA] [GO:0016504
"peptidase activator activity" evidence=IEA] [GO:0018149 "peptide
cross-linking" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042060 "wound
healing" evidence=IEA] InterPro:IPR000083 InterPro:IPR003961
Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253 PROSITE:PS50853
PROSITE:PS51091 SMART:SM00058 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0005577
GO:GO:0016504 GO:GO:0042060 GO:GO:0005604 GO:GO:0005793
GO:GO:0018149 InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GeneTree:ENSGT00700000104067 GO:GO:0007044
UniGene:Gga.3994 CTD:2335 KO:K05717 OMA:IPGHLNS GO:GO:0007161
EMBL:AADN02034494 IPI:IPI00590535 RefSeq:NP_001185641.1
Ensembl:ENSGALT00000005664 GeneID:396133 KEGG:gga:396133
NextBio:20816190 ArrayExpress:F1NJT3 Uniprot:F1NJT3
Length = 2483
Score = 207 (77.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 76/304 (25%), Positives = 132/304 (43%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFK 122
T++DF T + + ++ ++ PP T+ SV + + + W S SGF+
Sbjct: 698 TRFDFTTTSTTAVTSNTVSGETTLL-PPMVATSESVTEITASSFVVSWVSA-SDTVSGFR 755
Query: 123 LKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182
++ E P+ + + ++ DL PG Y V ++ + + E S + TT
Sbjct: 756 VEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTA 814
Query: 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
P+ P + V ++T++++ W S P + T Y++ P S + P
Sbjct: 815 PDAPPEHSVESVDDTSIVISW--SRPQAPITGYRIVYTPSVEGSST----ELNLPDTATS 868
Query: 243 AAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSNSLR 297
L+PG YNIS+ V E + STP Q T +P P ++ +
Sbjct: 869 VTLSDLMPGVQYNISIYAVEEHQESTPVFIQQETTGVPRTDEVPSPKDLQFVEVSDVKVT 928
Query: 298 VVWEPPKGFSEFDKYQV-SINVRRPG--ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
++W PP+ S+ Y+V +I V RPG PIT+S + ++ + L PG TY +
Sbjct: 929 IMWTPPQ--SQVSGYRVEAIPVNRPGQHGQRLPITRS----SFAEVVD-LLPGTTYLFKI 981
Query: 355 KTVS 358
VS
Sbjct: 982 FAVS 985
Score = 185 (70.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 75/313 (23%), Positives = 139/313 (44%)
Query: 51 KDNIEFSEGL-PGTKYDFYLYYTNSTVHDW-LTWTASITTPPDPPTNLSVNVRSGKTAQI 108
+D E GL PG++Y + + LT T S PP PTNL + + +
Sbjct: 1779 EDTAEL-HGLRPGSEYTINIVAIYDDMESLPLTGTQSTAIPP--PTNLKFTQVTPTSLTV 1835
Query: 109 FWSPPISGKYSGFKLKVISLSEKTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167
W+ P + + +G++++V + EKT P + I + + + + L Y+V ++++ D
Sbjct: 1836 NWNAP-NVRLTGYRVRV-NPKEKTGPMKEINLSPDSTSAV-VSGLMVATKYEVSVYALKD 1892
Query: 168 SKESVAYTSRNFTTKPNT--PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
S S TT N P + V ETT+ + W+ T +++ P +
Sbjct: 1893 SLTSRP-AQGVVTTLENVSPPRRARVTDATETTITITWRTK--TETITGFQIDAIPAASG 1949
Query: 226 ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFT 285
++ + + P GL PG Y I + T++E+ S+P T P +
Sbjct: 1950 QNPI---QRTISPDVRTYTITGLQPGNDYKIYLYTLNENARSSPVVIDASTAIDAPSNLR 2006
Query: 286 YDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGL 344
+ + T+NSL W+PP+ ++ Y + + +PG+ + + + R T+ ++ GL
Sbjct: 2007 F--LTTTTNSLLASWQPPR--AKITGYIIRYD--KPGSPAKELLPRPRPGTTEATIT-GL 2059
Query: 345 EPGRTYQVLVKTV 357
EPG Y + + V
Sbjct: 2060 EPGTEYTIYIIAV 2072
Score = 180 (68.4 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 83/347 (23%), Positives = 142/347 (40%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 747 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGEQN 804
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P SV + I WS P +G+++ V + S + +
Sbjct: 805 LILSTSQTTAPDAPPEHSVESVDDTSIVISWSRP-QAPITGYRI-VYTPSVEGSSTELNL 862
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT---PGKFIVWFR- 194
+ + +L DL PG Y + +++V + +ES + + T P T P + F
Sbjct: 863 PDTATS-VTLSDLMPGVQYNISIYAVEEHQESTPVFIQQETTGVPRTDEVPSPKDLQFVE 921
Query: 195 -NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
++ + ++W P P S + Y+V P + P + G+ +++F L+P
Sbjct: 922 VSDVKVTIMWTP--PQSQVSGYRVEAIPVNRPG------QHGQRLPITRSSFAEVVDLLP 973
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y + VS S P T + T P + + + T +S+ V+W P+
Sbjct: 974 GTTYLFKIFAVSHGRESKPLTGEQTTKLDAPTNLRF--INTTEHSVLVLWTRPRAI--IS 1029
Query: 311 KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
Y+++ R G P T + + L+PG Y V + V
Sbjct: 1030 GYRLTAGPTRGGQ---PRTYNVGPSATKYLLRNLQPGTEYTVYLVAV 1073
Score = 179 (68.1 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 93/341 (27%), Positives = 130/341 (38%)
Query: 26 STYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTAS 85
S YRL P G P TY PGT+Y YL + T
Sbjct: 1029 SGYRLTAGPTRGGQP--RTYNVGPSATKYLLRNLQPGTEYTVYLVAVKEDLQS-ARETGV 1085
Query: 86 ITT--PPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVI-SLSEKTPPRIIGFT 140
TT P PP N V S I W+P GFKL V S + P +I
Sbjct: 1086 FTTYQPVGSVPPFNTEVTETS---IVITWTP---APRIGFKLGVRPSQGGEAPREVI--- 1136
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
+ + LTPG Y L + D +E R TT + P + +T +L
Sbjct: 1137 -SDSGSIVISGLTPGVEYTYSLTVLMDGQERETPIIRRVTTPLSPPTNLRLEPNPDTGIL 1195
Query: 201 VL-WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
++ W S I + Y+V+ P + + E G F+ L PG YN+SV
Sbjct: 1196 IVSWDRSTTPGI-SGYRVTTAPTNGQQGSTLEEVVGADQ--TSCTFENLNPGVEYNVSVY 1252
Query: 260 TVSEDEISTPTTAQY-RTIP-LRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
V +D+ S P + + +P L LSF IT +S+ + W P S Y++++
Sbjct: 1253 AVKDDQESIPISKTITQEVPQLTDLSFV----DITDSSIGLRWTPLNA-STIIGYRITVV 1307
Query: 318 VRRPGASSTPITKSR-DEPTQCDMSEGLEPGRTYQVLVKTV 357
S PI + D GLEPG Y + V T+
Sbjct: 1308 A---AGESVPIFEDFVDSSVGYYTVTGLEPGIDYDISVITL 1345
Score = 174 (66.3 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 80/344 (23%), Positives = 129/344 (37%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWL 80
SS + YR+ +P GH P T V D + + EGL P +Y +Y N L
Sbjct: 1661 SSPVTGYRVTAVPKKGHGPTKTKNVPPD-QTQVTI-EGLQPTVEYMVSVYAQNQNGES-L 1717
Query: 81 TWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFT 140
+ T D P L+ + +I W P G+ + +++ S E ++
Sbjct: 1718 PLVETAVTNIDRPKGLTFTEVDVDSIKIAWESP-QGQVTRYRV-TYSSPEDGIHELLPAP 1775
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT-KPNTPGKFIVWFRNETTL 199
L L PG Y + + ++YD ES+ T T P T KF T+L
Sbjct: 1776 GGEEDTAELHGLRPGSEYTINIVAIYDDMESLPLTGTQSTAIPPPTNLKFTQV--TPTSL 1833
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
V W P T Y+V ++P + + + P A GL+ Y +SV
Sbjct: 1834 TVNWNA--PNVRLTGYRVRVNPKEKTGPMKEINLS---PDSTSAVVSGLMVATKYEVSVY 1888
Query: 260 TVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
+ + S P T+ P R T T ++ + W +Q+
Sbjct: 1889 ALKDSLTSRPAQGVVTTLENVSPPRRARVT----DATETTITITWRTKT--ETITGFQID 1942
Query: 316 INVRRPGASS-TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P AS PI ++ + GL+PG Y++ + T++
Sbjct: 1943 AI---PAASGQNPIQRTISPDVRTYTITGLQPGNDYKIYLYTLN 1983
Score = 171 (65.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 79/351 (22%), Positives = 137/351 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L++ + + S YR+ P +G V + + F PG +Y+ +Y
Sbjct: 1195 LIVSWDRSTTPGISGYRVTTAPTNGQQGSTLEEVVGADQTSCTFENLNPGVEYNVSVYAV 1254
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
+ + + +IT T+LS + + + W+P + G+++ V++ E
Sbjct: 1255 KDD-QESIPISKTITQEVPQLTDLSFVDITDSSIGLRWTPLNASTIIGYRITVVAAGESV 1313
Query: 133 PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW 192
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1314 PI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLRFT 1371
Query: 193 FRNETTLLVLWQPSYPASIY-THYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
T+ V W + P SI + + V P E V + P L+PG
Sbjct: 1372 NVGPDTMRVTW--TAPTSIVLSSFLVRYSPVKKEEDVAELTIS---PSDNVVVLTNLLPG 1426
Query: 252 RAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG-FSEFD 310
Y + V +V+E S P + +T P D + IT+NS V W P+ + +
Sbjct: 1427 TEYLVRVYSVAEQHESAPLSGIQKTGLDSPTGL--DFSDITANSFTVHWIAPRATITGYK 1484
Query: 311 -KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ V RP P SR+ T + L PG Y V + V+G+
Sbjct: 1485 IRHHPEHGVGRPKEDRVP--PSRNSITLTN----LLPGTEYVVSIIAVNGR 1529
Score = 168 (64.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 79/307 (25%), Positives = 122/307 (39%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+ P S
Sbjct: 1331 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNVGPDTMRVTWTAPTSI 1388
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYS-LKDLTPGGSYQVQLFSVYDSKESVAYT 175
S F ++ + ++ + T +P L +L PG Y V+++SV + ES +
Sbjct: 1389 VLSSFLVRYSPVKKEED--VAELTISPSDNVVVLTNLLPGTEYLVRVYSVAEQHESAPLS 1446
Query: 176 SRNFTTKPNTPG-KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
T + G F N T V W P + T YK+ P V +++
Sbjct: 1447 GIQKTGLDSPTGLDFSDITANSFT--VHWIA--PRATITGYKIRHHPE---HGVGRPKED 1499
Query: 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSN 294
PP L+PG Y +S+ V+ E S P Q T+ P + S TS
Sbjct: 1500 RVPPSRNSITLTNLLPGTEYVVSIIAVNGREESVPLVGQQTTVSDVPRDLEVNPTSPTS- 1558
Query: 295 SLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVL 353
L + W+ P + Y+++ G SS P+ + T + GL+PG Y +
Sbjct: 1559 -LEISWDAPAVTVRY--YRITYG--ETGGSS-PVQEFTVPGTMSRATITGLKPGVDYTIT 1612
Query: 354 VKTVSGK 360
V V+G+
Sbjct: 1613 VYAVTGR 1619
Score = 154 (59.3 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 66/261 (25%), Positives = 103/261 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTAS-- 85
YR+ P P +S D + S + TKY+ +Y + D LT +
Sbjct: 1847 YRVRVNPKEKTGPMKEINLSPDSTSAV-VSGLMVATKYEVSVY----ALKDSLTSRPAQG 1901
Query: 86 -ITTPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+TT + PP V + T I W +GF++ I + P I T +
Sbjct: 1902 VVTTLENVSPPRRARVTDATETTITITWRTKTE-TITGFQIDAIPAASGQNP--IQRTIS 1958
Query: 143 PPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
P Y++ L PG Y++ L+++ ++ S + +T + P +LL
Sbjct: 1959 PDVRTYTITGLQPGNDYKIYLYTLNENARSSPVVI-DASTAIDAPSNLRFLTTTTNSLLA 2017
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
WQP P + T Y + D P +P L PG +A GL PG Y I + V
Sbjct: 2018 SWQP--PRAKITGYIIRYDKPGSPAKELLPRPR---PGTTEATITGLEPGTEYTIYIIAV 2072
Query: 262 SEDEISTPTTAQYRTIPLRPL 282
++ S P + RT L L
Sbjct: 2073 KNNQKSEPLVGRKRTDDLPTL 2093
Score = 124 (48.7 bits), Expect = 0.00071, P = 0.00071
Identities = 66/276 (23%), Positives = 109/276 (39%)
Query: 52 DNIE-FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFW 110
DN+ + LPGT+Y Y+ + H+ + T D PT L + + + + W
Sbjct: 1415 DNVVVLTNLLPGTEY-LVRVYSVAEQHESAPLSGIQKTGLDSPTGLDFSDITANSFTVHW 1473
Query: 111 SPPISGKYSGFKLKVISLSEKTPPRIIGFTEN---PPAGYS--LKDLTPGGSYQVQLFSV 165
P +G+K++ P +G + PP+ S L +L PG Y V + +V
Sbjct: 1474 IAP-RATITGYKIR------HHPEHGVGRPKEDRVPPSRNSITLTNLLPGTEYVVSIIAV 1526
Query: 166 YDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
+ESV + TT + P V + T+L + W PA +Y+++
Sbjct: 1527 NGREESVPLVGQQ-TTVSDVPRDLEVNPTSPTSLEISWDA--PAVTVRYYRITYGETGGS 1583
Query: 226 ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS----------------EDEISTP 269
V ++ P ++A GL PG Y I+V V+ + EI TP
Sbjct: 1584 SPV---QEFTVPGTMSRATITGLKPGVDYTITVYAVTGRGDSPASSKPVTVTYKTEIDTP 1640
Query: 270 TTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
+ Q + +S + +S RV P KG
Sbjct: 1641 SQMQVTDVQDNSISIRWLPSSSPVTGYRVTAVPKKG 1676
>MGI|MGI:99516 [details] [associations]
symbol:Tnr "tenascin R" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=ISO] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISO;IDA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007158 "neuron cell-cell adhesion" evidence=IMP]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0008306 "associative learning" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0010977 "negative regulation of neuron
projection development" evidence=IDA] [GO:0022029 "telencephalon
cell migration" evidence=IMP] [GO:0022408 "negative regulation of
cell-cell adhesion" evidence=IDA;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030517 "negative regulation
of axon extension" evidence=IDA] [GO:0035641 "locomotory
exploration behavior" evidence=IMP] [GO:0045121 "membrane raft"
evidence=IDA] [GO:0046625 "sphingolipid binding" evidence=TAS]
[GO:0048692 "negative regulation of axon extension involved in
regeneration" evidence=IMP] [GO:0050804 "regulation of synaptic
transmission" evidence=IMP] [GO:0050805 "negative regulation of
synaptic transmission" evidence=IMP] [GO:0050808 "synapse
organization" evidence=IMP] [GO:0050885 "neuromuscular process
controlling balance" evidence=IMP] [GO:0051968 "positive regulation
of synaptic transmission, glutamatergic" evidence=IMP] [GO:0051971
"positive regulation of transmission of nerve impulse"
evidence=IMP] [GO:0060291 "long-term synaptic potentiation"
evidence=IMP] [GO:0072534 "perineuronal net" evidence=IDA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 MGI:MGI:99516
INTERPRO:IPR002181 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0060291
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0030198 GO:GO:0050885
GO:GO:0050808 GO:GO:0051968 GO:GO:0045121 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0008306 PROSITE:PS01186 GO:GO:0050805
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0007158 InterPro:IPR013111
Pfam:PF07974 GO:GO:0022408 GO:GO:0035641 GO:GO:0022029
GO:GO:0046625 GO:GO:0072534 HOVERGEN:HBG008949 KO:K06252
GeneTree:ENSGT00690000102056 HOGENOM:HOG000234355 CTD:7143
eggNOG:NOG311251 OrthoDB:EOG42FSGP OMA:KACPCAS GO:GO:0048692
EMBL:AK039390 EMBL:BC132392 EMBL:BC138043 EMBL:AJ005844
IPI:IPI00227126 IPI:IPI00553593 RefSeq:NP_071707.2 UniGene:Mm.44701
ProteinModelPortal:Q8BYI9 SMR:Q8BYI9 IntAct:Q8BYI9 STRING:Q8BYI9
PhosphoSite:Q8BYI9 PaxDb:Q8BYI9 PRIDE:Q8BYI9
Ensembl:ENSMUST00000111669 GeneID:21960 KEGG:mmu:21960
InParanoid:A2RT70 ChiTaRS:TNR NextBio:301652 Bgee:Q8BYI9
CleanEx:MM_TNR Genevestigator:Q8BYI9 Uniprot:Q8BYI9
Length = 1358
Score = 203 (76.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 89/314 (28%), Positives = 133/314 (42%)
Query: 52 DNIEFSE-GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF 109
D F++ GL PG +Y + T +AS++T D PT + V S A +
Sbjct: 465 DVTSFNQTGLKPGEEYIVNVVALKEQARSPPT-SASVSTVIDGPTQILVRDVSDTVAFVE 523
Query: 110 WSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166
W+PP K LK V KT R+ + P + YS++ L PG Y+V + +V
Sbjct: 524 WTPP-RAKVDFILLKYGLVGGEGGKTTFRL----QPPLSQYSVQALRPGSRYEVSISAVR 578
Query: 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE 226
+ ES A +S FTT+ + P V R T+L + W S + YKV +
Sbjct: 579 GTNESEA-SSTQFTTEIDAPKNLRVGSRTATSLDLEWDNSEAEA--QEYKVVYSTLAGEQ 635
Query: 227 SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTY 286
+ +G P + LVPG Y + + V + S P T RT P
Sbjct: 636 YHEVLVPKGIGP-TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSPRDLMV 694
Query: 287 DKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEP 346
+S TS SL +W G D Y+++ G SS +T RD T +++ LEP
Sbjct: 695 TASSETSISL--IWTKASG--PIDHYRITFTPSS-GISSE-VTVPRDR-TSYTLTD-LEP 746
Query: 347 GRTYQVLVKTVSGK 360
G Y + + G+
Sbjct: 747 GAEYIISITAERGR 760
Score = 144 (55.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 66/275 (24%), Positives = 116/275 (42%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISG-----KYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
PP +L V S ++ ++ W P++ Y L + L ++ P +G
Sbjct: 328 PPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPTALGGLQLQQRVP--------GDWSG 379
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
++ +L PG +Y + +++V + S+ T++ T +TP ETT+ V W+P
Sbjct: 380 VTIMELEPGLTYNISVYAVISNILSLPITAK-VATHLSTPQGLQFKTITETTVEVQWEP- 437
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK-GLVPGRAYNISVQTVSEDE 265
+ S + +++S P + V+ + P + + GL PG Y ++V + E
Sbjct: 438 FSFS-FDGWEISFIPKNNEGGVI-----AQLPSDVTSFNQTGLKPGEEYIVNVVALKEQA 491
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASS 325
S PT+A T+ P S T V W PP+ +F + + V G +
Sbjct: 492 RSPPTSASVSTVIDGPTQILVRDVSDTVAF--VEWTPPRAKVDFILLKYGL-VGGEGGKT 548
Query: 326 TPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSG 359
T R +P S + L PG Y+V + V G
Sbjct: 549 T----FRLQPPLSQYSVQALRPGSRYEVSISAVRG 579
Score = 143 (55.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 73/308 (23%), Positives = 126/308 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
+PGT+Y + ++ + T + T D P +L V S + + W+ SG
Sbjct: 657 VPGTEYGVGISAVMNSKQS-IPATMNARTELDSPRDLMVTASSETSISLIWTKA-SGPID 714
Query: 120 GFKLKV-----ISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAY 174
+++ IS SE T PR Y+L DL PG Y + + + ++S+
Sbjct: 715 HYRITFTPSSGIS-SEVTVPR-------DRTSYTLTDLEPGAEYIISITAERGRQQSLES 766
Query: 175 TSRNFTT-KPNTPGKFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVE 232
T FT +P + F +++ + W PS PA ++ P D E +L V
Sbjct: 767 TVDAFTGFRPISHLHFS--HVTSSSVNITWSDPSPPAD---RLILNYSPRDKEEDMLEVL 821
Query: 233 KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASIT 292
+ A GL P Y +++ V S P T P + T +++T
Sbjct: 822 LDATK---RHAVLMGLQPATEYIVNLVAVHGTVTSEPIVGSITTGIDPPKNITI--SNVT 876
Query: 293 SNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+SL V W P + FD Y+VS + G + + + T+ ++ L P Y++
Sbjct: 877 KDSLTVSWSSP--VAPFDYYRVSYRPTQVGRLDSSVVPNT--VTEFAITR-LYPATEYEI 931
Query: 353 LVKTVSGK 360
+ +V G+
Sbjct: 932 SLNSVRGR 939
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 63/297 (21%), Positives = 117/297 (39%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG 120
PG Y+ +Y S + L TA + T P L + T ++ W P S + G
Sbjct: 387 PGLTYNISVYAVISNILS-LPITAKVATHLSTPQGLQFKTITETTVEVQWEP-FSFSFDG 444
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
+++ I + + +I + ++ L PG Y V + ++ + S TS + +
Sbjct: 445 WEISFIPKNNEGG--VIAQLPSDVTSFNQTGLKPGEEYIVNVVALKEQARSPP-TSASVS 501
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T + P + +V ++T V W P + K + + ++ ++ PP
Sbjct: 502 TVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQ----PP-L 556
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW 300
+Q + + L PG Y +S+ V S ++ Q+ T P + S T+ SL + W
Sbjct: 557 SQYSVQALRPGSRYEVSISAVRGTNESEASSTQFTTEIDAPKNLRV--GSRTATSLDLEW 614
Query: 301 EPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ + +E +Y+V + + PT L PG Y V + V
Sbjct: 615 DNSE--AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAV 669
Score = 45 (20.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 43 TTYVSRDIKDNIEFSEGLPG-TKYDFYL 69
T + RD+ D + F E P K DF L
Sbjct: 508 TQILVRDVSDTVAFVEWTPPRAKVDFIL 535
>ZFIN|ZDB-GENE-000426-1 [details] [associations]
symbol:fn1 "fibronectin 1" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IMP] [GO:0001756 "somitogenesis"
evidence=IGI;IMP] [GO:0035050 "embryonic heart tube development"
evidence=IGI;IMP] [GO:0005178 "integrin binding" evidence=IGI;IDA]
[GO:0001757 "somite specification" evidence=IGI] [GO:0060956
"endocardial cell differentiation" evidence=IMP] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041
PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058
SMART:SM00060 ZFIN:ZDB-GENE-000426-1 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0003007 SUPFAM:SSF49265
GO:GO:0005178 GO:GO:0016337 InterPro:IPR013806 SUPFAM:SSF57440
Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059
PROSITE:PS00023 PROSITE:PS51092 GO:GO:0045198 GO:GO:0001757
GO:GO:0035050 HOVERGEN:HBG005731 GO:GO:0060956 EMBL:BC162574
IPI:IPI00502217 UniGene:Dr.51894 ProteinModelPortal:B3DGZ1
STRING:B3DGZ1 ArrayExpress:B3DGZ1 Uniprot:B3DGZ1
Length = 2480
Score = 207 (77.9 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 87/346 (25%), Positives = 145/346 (41%)
Query: 24 DNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWT 83
D + YR+ P G + + +++ PG +Y+ ++ TV D +
Sbjct: 1201 DITGYRVTCTPTKGQQGNSLEEFVKAGQNSCTLENLSPGVEYNVSVF----TVKDDMESV 1256
Query: 84 ASITT-PPDPP--TNLS-VNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
TT PD P T+LS +NV + T + WSP S +G+++ V++ + P + F
Sbjct: 1257 PVFTTVTPDVPKITDLSFINV-TDSTIGLSWSPLNSTAVTGYRITVLAAGDSVPI-FVEF 1314
Query: 140 TENPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET- 197
E P G Y++ L PG Y + + +V ++ ES T T + P + + F T
Sbjct: 1315 VE-PTTGFYTVHGLEPGIDYDITVTTVTENGESEPIT---ITQQTAVPAPYGLSFGEVTA 1370
Query: 198 -TLLVLWQ-PSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254
T+LV W+ P P +S Y + P D + EG + LVP Y
Sbjct: 1371 DTMLVTWKAPQVPKSSDINQYIIRYHPVDEDDETTERTVEGSENF---VVLRHLVPNTEY 1427
Query: 255 NISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+SV V E +P RT+ P+ + TS ++R W+ P+ Y++
Sbjct: 1428 LVSVICVYEGREGSPAIGTQRTVFDAPVGLQFSDVGTTSFTVR--WQAPRAI--ISGYRI 1483
Query: 315 SINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSG 359
+ G + + R P++ + GL P Y + V VSG
Sbjct: 1484 RYQMTSGGRAK----EERLPPSRSHFTLTGLTPETEYSISVYAVSG 1525
Score = 203 (76.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 71/275 (25%), Positives = 125/275 (45%)
Query: 53 NIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSP 112
++ SE LPG KY +Y L T S TT PD P++ V + + +I WS
Sbjct: 770 SVNISELLPGRKYTVNVYEVTGEGEPNLILTTSQTTAPDAPSDHEVEDVADTSIRISWSK 829
Query: 113 PISGKYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES 171
P++ +G+++ E + + + E+ + +L DL PG Y + +FSV +++ES
Sbjct: 830 PLA-PITGYRVVYTPSEEGSSGSVELNLPEHSTS-LTLGDLRPGVLYNISIFSVEENQES 887
Query: 172 ----VAYTSRNFTTKPNTPGKFIVWFR--NETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
V T+ P + F +++ + + W + P+S + Y+VS+ P
Sbjct: 888 EPVFVQVTTAGEPLAEEVPSPTDLQFYEVSDSKITITW--TSPSSEVSGYRVSVGEV-GP 944
Query: 226 ESVLYVEKEGEPPGP--AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS 283
+ + +EKE P A A L PG Y + ++ E S P + T P P
Sbjct: 945 DGL--IEKEVPYPVTQNAYAEITHLQPGTLYRFFIFSLKSGEESEPLVGEQATKPDPPTD 1002
Query: 284 FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINV 318
+ ++IT +S +VW PP ++ Y++ + V
Sbjct: 1003 IYF--SNITEDSAVIVWLPPT--AQITGYRLFLTV 1033
Score = 198 (74.8 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 75/283 (26%), Positives = 130/283 (45%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
Y+L P+ G P V+ ++ ++ S PG +Y + + S T +
Sbjct: 1114 YKLTVRPSQGGEAPRD--VTSEL-GSVLISGLTPGVEYTYSVQPVISGQEHGNPITRRVV 1170
Query: 88 TPPDPPT--NLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
TP PPT NL N +GK + W+ +G+++ + + F +
Sbjct: 1171 TPLSPPTDLNLESNPNTGKLT-VQWNDANIPDITGYRVTCTPTKGQQGNSLEEFVKAGQN 1229
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT-KPNTPGKFIVWFRNET--TLLVL 202
+L++L+PG Y V +F+V D ESV FTT P+ P + F N T T+ +
Sbjct: 1230 SCTLENLSPGVEYNVSVFTVKDDMESVPV----FTTVTPDVPKITDLSFINVTDSTIGLS 1285
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESV-LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
W P ++ T Y++++ A +SV ++VE P GL PG Y+I+V TV
Sbjct: 1286 WSPLNSTAV-TGYRITVLA--AGDSVPIFVEFV--EPTTGFYTVHGLEPGIDYDITVTTV 1340
Query: 262 SEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPK 304
+E+ S P T +T P ++ + +T++++ V W+ P+
Sbjct: 1341 TENGESEPITITQQTAVPAPYGLSFGE--VTADTMLVTWKAPQ 1381
Score = 191 (72.3 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 76/304 (25%), Positives = 129/304 (42%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFW-SPPISG 116
GL P T+Y +Y + + D L T + +T D PT+L V + + + W +P ++
Sbjct: 1509 GLTPETEYSISVYAVSGS-RDSLPLTGTQSTISDAPTDLEVISSTPTSITVRWDAPSVTV 1567
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+Y +++ P + + +++DL PG Y + +++V +S A ++
Sbjct: 1568 RY--YRITHGESGGSDAP-LEFMVPGSQSTATIEDLRPGTDYTITVYAVTGRGDSPASST 1624
Query: 177 R---NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK 233
T ++P + V + T+ V W P+ A + Y+V+ P VL+ E
Sbjct: 1625 PIHVKHRTDIDSPSQMEVTDVKDNTITVRWTPA--AGPISRYRVNATPLTGEGPVLHAET 1682
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP--LSFTYDKASI 291
+ + F GL+P Y+I V + +D S P T +P LSFT +
Sbjct: 1683 TSDH---TEITFSGLMPAVEYSIKVYALGQDGESLPLVENVVTTVDKPKDLSFT----DV 1735
Query: 292 TSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST-PITKSRDEPTQCDMSEGLEPGRTY 350
S+S+R+ W+ P G Y+V G P DE + GL PG Y
Sbjct: 1736 ESSSMRISWDSPDGV--VSSYRVLYYSPEEGERELFPAPHGDDESA---VLHGLRPGTEY 1790
Query: 351 QVLV 354
V V
Sbjct: 1791 TVKV 1794
Score = 175 (66.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 79/302 (26%), Positives = 122/302 (40%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG 120
PGT Y F+++ S + T PDPPT++ + + +A I W PP + + +G
Sbjct: 969 PGTLYRFFIFSLKSG-EESEPLVGEQATKPDPPTDIYFSNITEDSAVIVWLPP-TAQITG 1026
Query: 121 FKLKVISLSEKTPP--RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN 178
++L +++ P RI G Y+L +L P Y L + + S +
Sbjct: 1027 YRL-FLTVEGSNPKQLRIPGRLSQ----YTLLNLQPDTEYSATLHAERGNVLSEGSIATF 1081
Query: 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
TT P + +T+++V W P P YK+++ P E+ V E
Sbjct: 1082 ATTPPMGNAPYFSTDVTDTSIIVSWSP-LPK---IGYKLTVRPSQGGEAPRDVTSE---- 1133
Query: 239 GPAQAAFKGLVPGRAYNISVQTV-SEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLR 297
GL PG Y SVQ V S E P T + T PL P + +++ + L
Sbjct: 1134 -LGSVLISGLTPGVEYTYSVQPVISGQEHGNPITRRVVT-PLSPPTDLNLESNPNTGKLT 1191
Query: 298 VVWEPPKGFSEFDKYQVSINVRR--PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVK 355
V W + Y+V+ + G S K+ C + E L PG Y V V
Sbjct: 1192 VQWNDAN-IPDITGYRVTCTPTKGQQGNSLEEFVKAGQN--SCTL-ENLSPGVEYNVSVF 1247
Query: 356 TV 357
TV
Sbjct: 1248 TV 1249
Score = 175 (66.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 75/336 (22%), Positives = 132/336 (39%)
Query: 26 STYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTAS 85
S YR++ P G P + D + I FS +P +Y +Y L +
Sbjct: 1662 SRYRVNATPLTGEGPVLHAETTSDHTE-ITFSGLMPAVEYSIKVYALGQDGES-LPLVEN 1719
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
+ T D P +LS + +I W P G S +++ S E+ +
Sbjct: 1720 VVTTVDKPKDLSFTDVESSSMRISWDSP-DGVVSSYRVLYYS-PEEGERELFPAPHGDDE 1777
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
L L PG Y V++ +++D S A T P P + T+ V W
Sbjct: 1778 SAVLHGLRPGTEYTVKVIALHDQLPSTALVGTQTTGIPG-PTRLQFSQVGPTSFTVSWSS 1836
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
S AS+ T Y+V++ P ++E P + GL+PG Y + V V ++
Sbjct: 1837 S-DASL-TGYRVAVSPKSKSGPT---KEENITPDSTEFHATGLMPGTDYEVEVYGV-KNS 1890
Query: 266 ISTPTTAQYRTIP--LRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGA 323
+++P T P + P +++ +S+ + W + V G
Sbjct: 1891 LTSPRVKGEITTPDNISPPR-RVRISNVKDSSITLTWRSKT--EAISGFLVEATPTMGGH 1947
Query: 324 SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ PI ++ + ++ GLEPG Y++ + T++G
Sbjct: 1948 N--PIQRTIEPDSRTYTIAGLEPGTNYKINIYTLNG 1981
Score = 161 (61.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 78/310 (25%), Positives = 117/310 (37%)
Query: 59 GL-PGTKYDFYLY-YTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + T + + +T T P P LS + T + W P
Sbjct: 1326 GLEPGIDYDITVTTVTENGESEPITITQQTAVPA--PYGLSFGEVTADTMLVTWKAPQVP 1383
Query: 117 KYSGFKLKVISL-----SEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE- 170
K S +I ++T R + +EN L+ L P Y V + VY+ +E
Sbjct: 1384 KSSDINQYIIRYHPVDEDDETTERTVEGSENFVV---LRHLVPNTEYLVSVICVYEGREG 1440
Query: 171 SVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLY 230
S A ++ T + P T+ V WQ P +I + Y++ +
Sbjct: 1441 SPAIGTQR--TVFDAPVGLQFSDVGTTSFTVRWQA--PRAIISGYRIRYQMTSGGRA--- 1493
Query: 231 VEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKAS 290
++E PP + GL P Y+ISV VS S P T TI P + S
Sbjct: 1494 -KEERLPPSRSHFTLTGLTPETEYSISVYAVSGSRDSLPLTGTQSTISDAPTDL--EVIS 1550
Query: 291 ITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTY 350
T S+ V W+ P + Y+++ G S P+ E L PG Y
Sbjct: 1551 STPTSITVRWDAPSVTVRY--YRITHG--ESGGSDAPLEFMVPGSQSTATIEDLRPGTDY 1606
Query: 351 QVLVKTVSGK 360
+ V V+G+
Sbjct: 1607 TITVYAVTGR 1616
Score = 153 (58.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 68/267 (25%), Positives = 113/267 (42%)
Query: 22 SSDNST--YRLDYIPAHGHPPPNTTYVSRDIKDNIEF-SEGL-PGTKYDFYLYYTNSTVH 77
SSD S YR+ P P ++ D+ EF + GL PGT Y+ +Y +++
Sbjct: 1836 SSDASLTGYRVAVSPKSKSGPTKEENIT---PDSTEFHATGLMPGTDYEVEVYGVKNSLT 1892
Query: 78 DWLTWTASITTPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR 135
ITTP + PP + ++ + + W SGF ++ P
Sbjct: 1893 SPRV-KGEITTPDNISPPRRVRISNVKDSSITLTWRSKTEA-ISGFLVEATPTMGGHNP- 1949
Query: 136 IIGFTENPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP--NTPGKFIVW 192
I T P + Y++ L PG +Y++ ++++ + S +T T KP + P
Sbjct: 1950 -IQRTIEPDSRTYTIAGLEPGTNYKINIYTLNGNSRSEPFTLTATTAKPVISPPTNLHFT 2008
Query: 193 FRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP-PGPAQ--AAFKGLV 249
T++ W+P P S T Y V+ + + KE P P A+ A+ GL+
Sbjct: 2009 SLASTSISFTWEP--PRSTITGYYVTYEEAGG------IPKELTPRPQAARTFASISGLI 2060
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRT 276
PG Y I + ++ + STP + RT
Sbjct: 2061 PGTEYIIKIVALNGAQRSTPLIGKART 2087
Score = 46 (21.3 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 343 GLEPGRTYQVLVKTVSG 359
GL G +Y VLV++V+G
Sbjct: 2253 GLTSGASYNVLVESVNG 2269
>UNIPROTKB|F8W7G7 [details] [associations]
symbol:FN1 "Ugl-Y3" species:9606 "Homo sapiens" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 EMBL:AC012462 IPI:IPI00414283 HGNC:HGNC:3778
ChiTaRS:FN1 EMBL:AC073284 ProteinModelPortal:F8W7G7 SMR:F8W7G7
PRIDE:F8W7G7 Ensembl:ENST00000346544 ArrayExpress:F8W7G7
Bgee:F8W7G7 Uniprot:F8W7G7
Length = 2211
Score = 204 (76.9 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 86/306 (28%), Positives = 132/306 (43%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T++ V T T TTP P T+ SV + + + W S SG
Sbjct: 693 TRFDFTTTSTSTPVTS-NTVTGE-TTPFSPLVATSESVTEITASSFVVSWVSA-SDTVSG 749
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 750 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQT 808
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 809 TAPDAPPDTTVDQVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPET 861
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDK------ASITS 293
A + L PG YNI++ V E++ STP Q T P S T +T
Sbjct: 862 ANSVTLSDLQPGVQYNITIYAVEENQESTPVVIQQETTGT-PRSDTVPSPRDLQFVEVTD 920
Query: 294 NSLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+ ++W PP+ S Y+V I V PG + SR+ T +++ GL PG TY
Sbjct: 921 VKVTIMWTPPE--SAVTGYRVDVIPVNLPGEHGQRLPISRN--TFAEVT-GLSPGVTYYF 975
Query: 353 LVKTVS 358
V VS
Sbjct: 976 KVFAVS 981
Score = 201 (75.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 82/312 (26%), Positives = 137/312 (43%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 743 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEDGEQS 800
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 801 LILSTSQTTAPDAPPDTTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 858
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT-KPNT---PGKFIVWFRN 195
E + +L DL PG Y + +++V +++ES + TT P + P + F
Sbjct: 859 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVVIQQETTGTPRSDTVPSPRDLQFVE 917
Query: 196 ETTLLV--LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
T + V +W P P S T Y+V + P + P + G+ ++ F GL P
Sbjct: 918 VTDVKVTIMWTP--PESAVTGYRVDVIPVNLPG------EHGQRLPISRNTFAEVTGLSP 969
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y V VS S P TAQ T P + + + T +++ V W PP+ ++
Sbjct: 970 GVTYYFKVFAVSHGRESKPLTAQQTTKLDAPTNLQF--VNETDSTVLVRWTPPR--AQIT 1025
Query: 311 KYQVSINVRRPG 322
Y++++ + R G
Sbjct: 1026 GYRLTVGLTRRG 1037
Score = 201 (75.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 92/343 (26%), Positives = 145/343 (42%)
Query: 28 YRLDYIPA-----HGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLT 81
YR+D IP HG P +SR+ + GL PG Y F ++ S +
Sbjct: 937 YRVDVIPVNLPGEHGQRLP----ISRNTFAEVT---GLSPGVTYYFKVFAV-SHGRESKP 988
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
TA TT D PTNL + T + W+PP + +G++L V L+ + PR +
Sbjct: 989 LTAQQTTKLDAPTNLQFVNETDSTVLVRWTPP-RAQITGYRLTV-GLTRRGQPR--QYNV 1044
Query: 142 NPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE---T 197
P Y L++L P Y V L ++ ++ES T FTT PG I + E T
Sbjct: 1045 GPSVSKYPLRNLQPASEYTVSLVAIKGNQESPKATGV-FTTLQ--PGSSIPPYNTEVTET 1101
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
T+++ W P+ P +K+ + P E+ V + GL PG Y +
Sbjct: 1102 TIVITWTPA-PR---IGFKLGVRPSQGGEAPREVTSDS-----GSIVVSGLTPGVEYVYT 1152
Query: 258 VQTVSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSI 316
+Q + + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1153 IQVLRDGQERDAPIVNKVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITT 1210
Query: 317 NVR--RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G S + + + + C + L PG Y V V TV
Sbjct: 1211 TPTNGQQGNSLEEVVHA--DQSSCTF-DNLSPGLEYNVSVYTV 1250
Score = 190 (71.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 86/342 (25%), Positives = 138/342 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
++L P+ G P V+ D +I S PG +Y + + +
Sbjct: 1115 FKLGVRPSQGGEAPRE--VTSD-SGSIVVSGLTPGVEYVYTIQVLRDGQERDAPIVNKVV 1171
Query: 88 TPPDPPTNLSV--NVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
TP PPTNL + N +G + W + +G+++ + + + +
Sbjct: 1172 TPLSPPTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQS 1230
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN--ETTLLVLW 203
+ +L+PG Y V +++V D KESV + T P P + F N T+ V W
Sbjct: 1231 SCTFDNLSPGLEYNVSVYTVKDDKESVPISD---TIIPAVPPPTDLRFTNIGPDTMRVTW 1287
Query: 204 QPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
P P SI T++ V P E V E P A L+PG Y +SV +V
Sbjct: 1288 AP--PPSIDLTNFLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLLPGTEYVVSVSSVY 1342
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR--- 319
E STP + +T P D + IT+NS V W P+ + Y++ +
Sbjct: 1343 EQHESTPLRGRQKTGLDSPTGI--DFSDITANSFTVHWIAPR--ATITGYRIRHHPEHFS 1398
Query: 320 -RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
RP P SR+ T +++ PG Y V + ++G+
Sbjct: 1399 GRPREDRVP--HSRNSITLTNLT----PGTEYVVSIVALNGR 1434
Score = 174 (66.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 84/348 (24%), Positives = 147/348 (42%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D +++ +GL PG++Y +
Sbjct: 1648 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGEEDTAELQGLRPGSEYTVSVVA 1704
Query: 72 TNSTVHDW-LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
+ + L T S P PT+L + + W+PP + + +G++++V E
Sbjct: 1705 LHDDMESQPLIGTQSTAIPA--PTDLKFTQVTPTSLSAQWTPP-NVQLTGYRVRVTP-KE 1760
Query: 131 KTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PG 187
KT P + I + + + L Y+V ++++ D+ S TT N P
Sbjct: 1761 KTGPMKEINLAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPR 1818
Query: 188 KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG 247
+ V ETT+ + W+ T ++V P + + K P G
Sbjct: 1819 RARVTDATETTITISWRTK--TETITGFQVDAVPANGQTPIQRTIK----PDVRSYTITG 1872
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFS 307
L PG Y I + T++++ S+P T P + + + T NSL V W+PP+ +
Sbjct: 1873 LQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR--A 1928
Query: 308 EFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 1929 RITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIYV 1973
Score = 163 (62.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 77/352 (21%), Positives = 140/352 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y T
Sbjct: 1191 LTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVY-T 1249
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
+ + + +I PPT+L T ++ W+PP S + F ++ + +
Sbjct: 1250 VKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEE 1309
Query: 133 PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW 192
+ + + A L +L PG Y V + SVY+ ES R T + G +
Sbjct: 1310 DVAELSISPSDNA-VVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTG---ID 1365
Query: 193 FRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA-AFKGLV 249
F + T + V W P + T Y++ PE +E P + L
Sbjct: 1366 FSDITANSFTVHWIA--PRATITGYRIR----HHPEHFSGRPREDRVPHSRNSITLTNLT 1419
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG Y +S+ ++ E S Q T+ P + + T SL + W+ P +
Sbjct: 1420 PGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDL--EVVAATPTSLLISWDAPAVTVRY 1477
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y+++ G +S P+ + ++ + GL+PG Y + V V+G+
Sbjct: 1478 --YRITYG--ETGGNS-PVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGR 1524
Score = 158 (60.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 70/306 (22%), Positives = 118/306 (38%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1752 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1809
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ + + +TP I T P
Sbjct: 1810 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAVPANGQTP---IQRTIKPDV 1865
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1866 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 1924
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 1925 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIYVIALKNN 1979
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS 324
+ S P + +T T A S ++ P G E + Q + A+
Sbjct: 1980 QKSEPLIGRKKTGQEALSQTTISWAPFQDTSEYIISCHPVGTDE-EPLQFRVPGTSTSAT 2038
Query: 325 STPITK 330
T +T+
Sbjct: 2039 LTGLTR 2044
Score = 145 (56.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 81/345 (23%), Positives = 128/345 (37%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P P T + D E + EGL P +Y +Y N +
Sbjct: 1566 SSPVTGYRVTTTPKNG-PGPTKTKTAGP--DQTEMTIEGLQPTVEYVVSVYAQNPSGESQ 1622
Query: 80 -LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIG 138
L TA T D P L+ + +I W P G+ S +++ S E +
Sbjct: 1623 PLVQTA--VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFP 1678
Query: 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPN-TPGKFIVWFRNET 197
+ L+ L PG Y V + +++D ES T P T KF T
Sbjct: 1679 APDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTAIPAPTDLKFTQV--TPT 1736
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
+L W P P T Y+V + P + + + P + GL+ Y +S
Sbjct: 1737 SLSAQWTP--PNVQLTGYRVRVTPKEKTGPMKEINLA---PDSSSVVVSGLMVATKYEVS 1791
Query: 258 VQTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
V + + S P T+ P R T T ++ + W +Q
Sbjct: 1792 VYALKDTLTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQ 1845
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
V P TPI ++ + GL+PG Y++ + T++
Sbjct: 1846 VDAV---PANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLN 1887
Score = 142 (55.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 68/268 (25%), Positives = 105/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1092 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1142
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E A T + P + +T +L V W+ S
Sbjct: 1143 LTPGVEYVYTIQVLRDGQERDAPIVNKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1202
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + +E + F L PG YN+SV TV +D+ S P
Sbjct: 1203 I-TGYRITTTPTNGQQGNSL--EEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPI 1259
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P +I +++RV W PP + + V + P + + +
Sbjct: 1260 SDTI--IPAVPPPTDLRFTNIGPDTMRVTWAPPPSI-DLTNFLVRYS---PVKNEEDVAE 1313
Query: 331 SRDEPTQ-CDMSEGLEPGRTYQVLVKTV 357
P+ + L PG Y V V +V
Sbjct: 1314 LSISPSDNAVVLTNLLPGTEYVVSVSSV 1341
Score = 134 (52.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 78/337 (23%), Positives = 125/337 (37%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY-YTNSTVHDWLTWTASI 86
YR+ Y G+ P V K S PG Y +Y T + SI
Sbjct: 1478 YRITYGETGGNSPVQEFTVPGS-KSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISI 1536
Query: 87 T--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P+ + V + + W P S +G++ ++ + K P G T+
Sbjct: 1537 NYRTEIDKPSQMQVTDVQDNSISVKWLPS-SSPVTGYR---VTTTPKNGP---GPTKTKT 1589
Query: 145 AG-----YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
AG +++ L P Y V +++ S ES + T + P + ++
Sbjct: 1590 AGPDQTEMTIEGLQPTVEYVVSVYAQNPSGESQPLV-QTAVTNIDRPKGLAFTDVDVDSI 1648
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
+ W+ P + Y+V+ P+ L+ +GE A +GL PG Y +SV
Sbjct: 1649 KIAWES--PQGQVSRYRVTYSSPEDGIHELFPAPDGEED---TAELQGLRPGSEYTVSVV 1703
Query: 260 TVSEDEISTPTTAQYRT-IPL-RPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
+ +D S P T IP L FT +T SL W PP + Y+V +
Sbjct: 1704 ALHDDMESQPLIGTQSTAIPAPTDLKFT----QVTPTSLSAQWTPPN--VQLTGYRVRVT 1757
Query: 318 VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
+ I + D + + GL Y+V V
Sbjct: 1758 PKEKTGPMKEINLAPDSSSV--VVSGLMVATKYEVSV 1792
>UNIPROTKB|E9PE77 [details] [associations]
symbol:FN1 "Ugl-Y3" species:9606 "Homo sapiens" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 EMBL:AC012462 HGNC:HGNC:3778 ChiTaRS:FN1
EMBL:AC073284 IPI:IPI00845263 ProteinModelPortal:E9PE77 SMR:E9PE77
PRIDE:E9PE77 Ensembl:ENST00000446046 UCSC:uc002vff.3
ArrayExpress:E9PE77 Bgee:E9PE77 Uniprot:E9PE77
Length = 2330
Score = 204 (76.9 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 86/306 (28%), Positives = 132/306 (43%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T++ V T T TTP P T+ SV + + + W S SG
Sbjct: 693 TRFDFTTTSTSTPVTS-NTVTGE-TTPFSPLVATSESVTEITASSFVVSWVSA-SDTVSG 749
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 750 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQT 808
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 809 TAPDAPPDTTVDQVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPET 861
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDK------ASITS 293
A + L PG YNI++ V E++ STP Q T P S T +T
Sbjct: 862 ANSVTLSDLQPGVQYNITIYAVEENQESTPVVIQQETTGT-PRSDTVPSPRDLQFVEVTD 920
Query: 294 NSLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+ ++W PP+ S Y+V I V PG + SR+ T +++ GL PG TY
Sbjct: 921 VKVTIMWTPPE--SAVTGYRVDVIPVNLPGEHGQRLPISRN--TFAEVT-GLSPGVTYYF 975
Query: 353 LVKTVS 358
V VS
Sbjct: 976 KVFAVS 981
Score = 201 (75.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 82/312 (26%), Positives = 137/312 (43%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 743 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEDGEQS 800
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 801 LILSTSQTTAPDAPPDTTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 858
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT-KPNT---PGKFIVWFRN 195
E + +L DL PG Y + +++V +++ES + TT P + P + F
Sbjct: 859 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVVIQQETTGTPRSDTVPSPRDLQFVE 917
Query: 196 ETTLLV--LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
T + V +W P P S T Y+V + P + P + G+ ++ F GL P
Sbjct: 918 VTDVKVTIMWTP--PESAVTGYRVDVIPVNLPG------EHGQRLPISRNTFAEVTGLSP 969
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y V VS S P TAQ T P + + + T +++ V W PP+ ++
Sbjct: 970 GVTYYFKVFAVSHGRESKPLTAQQTTKLDAPTNLQF--VNETDSTVLVRWTPPR--AQIT 1025
Query: 311 KYQVSINVRRPG 322
Y++++ + R G
Sbjct: 1026 GYRLTVGLTRRG 1037
Score = 201 (75.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 92/343 (26%), Positives = 145/343 (42%)
Query: 28 YRLDYIPA-----HGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLT 81
YR+D IP HG P +SR+ + GL PG Y F ++ S +
Sbjct: 937 YRVDVIPVNLPGEHGQRLP----ISRNTFAEVT---GLSPGVTYYFKVFAV-SHGRESKP 988
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
TA TT D PTNL + T + W+PP + +G++L V L+ + PR +
Sbjct: 989 LTAQQTTKLDAPTNLQFVNETDSTVLVRWTPP-RAQITGYRLTV-GLTRRGQPR--QYNV 1044
Query: 142 NPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE---T 197
P Y L++L P Y V L ++ ++ES T FTT PG I + E T
Sbjct: 1045 GPSVSKYPLRNLQPASEYTVSLVAIKGNQESPKATGV-FTTLQ--PGSSIPPYNTEVTET 1101
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
T+++ W P+ P +K+ + P E+ V + GL PG Y +
Sbjct: 1102 TIVITWTPA-PR---IGFKLGVRPSQGGEAPREVTSDS-----GSIVVSGLTPGVEYVYT 1152
Query: 258 VQTVSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSI 316
+Q + + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1153 IQVLRDGQERDAPIVNKVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITT 1210
Query: 317 NVR--RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G S + + + + C + L PG Y V V TV
Sbjct: 1211 TPTNGQQGNSLEEVVHA--DQSSCTF-DNLSPGLEYNVSVYTV 1250
Score = 190 (71.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 86/342 (25%), Positives = 138/342 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
++L P+ G P V+ D +I S PG +Y + + +
Sbjct: 1115 FKLGVRPSQGGEAPRE--VTSD-SGSIVVSGLTPGVEYVYTIQVLRDGQERDAPIVNKVV 1171
Query: 88 TPPDPPTNLSV--NVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
TP PPTNL + N +G + W + +G+++ + + + +
Sbjct: 1172 TPLSPPTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQS 1230
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN--ETTLLVLW 203
+ +L+PG Y V +++V D KESV + T P P + F N T+ V W
Sbjct: 1231 SCTFDNLSPGLEYNVSVYTVKDDKESVPISD---TIIPAVPPPTDLRFTNIGPDTMRVTW 1287
Query: 204 QPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
P P SI T++ V P E V E P A L+PG Y +SV +V
Sbjct: 1288 AP--PPSIDLTNFLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLLPGTEYVVSVSSVY 1342
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR--- 319
E STP + +T P D + IT+NS V W P+ + Y++ +
Sbjct: 1343 EQHESTPLRGRQKTGLDSPTGI--DFSDITANSFTVHWIAPR--ATITGYRIRHHPEHFS 1398
Query: 320 -RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
RP P SR+ T +++ PG Y V + ++G+
Sbjct: 1399 GRPREDRVP--HSRNSITLTNLT----PGTEYVVSIVALNGR 1434
Score = 174 (66.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 84/348 (24%), Positives = 147/348 (42%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D +++ +GL PG++Y +
Sbjct: 1648 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGEEDTAELQGLRPGSEYTVSVVA 1704
Query: 72 TNSTVHDW-LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
+ + L T S P PT+L + + W+PP + + +G++++V E
Sbjct: 1705 LHDDMESQPLIGTQSTAIPA--PTDLKFTQVTPTSLSAQWTPP-NVQLTGYRVRVTP-KE 1760
Query: 131 KTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PG 187
KT P + I + + + L Y+V ++++ D+ S TT N P
Sbjct: 1761 KTGPMKEINLAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPR 1818
Query: 188 KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG 247
+ V ETT+ + W+ T ++V P + + K P G
Sbjct: 1819 RARVTDATETTITISWRTK--TETITGFQVDAVPANGQTPIQRTIK----PDVRSYTITG 1872
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFS 307
L PG Y I + T++++ S+P T P + + + T NSL V W+PP+ +
Sbjct: 1873 LQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR--A 1928
Query: 308 EFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 1929 RITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIYV 1973
Score = 164 (62.8 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 64/274 (23%), Positives = 109/274 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1752 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1809
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ + + +TP I T P
Sbjct: 1810 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAVPANGQTP---IQRTIKPDV 1865
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1866 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 1924
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 1925 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIYVIALKNN 1979
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
+ S P + +T+ P F T N +++
Sbjct: 1980 QKSEPLIGRKKTVQKTP--FVTHPGYDTGNGIQL 2011
Score = 163 (62.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 77/352 (21%), Positives = 140/352 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y T
Sbjct: 1191 LTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVY-T 1249
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
+ + + +I PPT+L T ++ W+PP S + F ++ + +
Sbjct: 1250 VKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEE 1309
Query: 133 PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW 192
+ + + A L +L PG Y V + SVY+ ES R T + G +
Sbjct: 1310 DVAELSISPSDNA-VVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTG---ID 1365
Query: 193 FRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA-AFKGLV 249
F + T + V W P + T Y++ PE +E P + L
Sbjct: 1366 FSDITANSFTVHWIA--PRATITGYRIR----HHPEHFSGRPREDRVPHSRNSITLTNLT 1419
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG Y +S+ ++ E S Q T+ P + + T SL + W+ P +
Sbjct: 1420 PGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDL--EVVAATPTSLLISWDAPAVTVRY 1477
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y+++ G +S P+ + ++ + GL+PG Y + V V+G+
Sbjct: 1478 --YRITYG--ETGGNS-PVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGR 1524
Score = 145 (56.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 81/345 (23%), Positives = 128/345 (37%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P P T + D E + EGL P +Y +Y N +
Sbjct: 1566 SSPVTGYRVTTTPKNG-PGPTKTKTAGP--DQTEMTIEGLQPTVEYVVSVYAQNPSGESQ 1622
Query: 80 -LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIG 138
L TA T D P L+ + +I W P G+ S +++ S E +
Sbjct: 1623 PLVQTA--VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFP 1678
Query: 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPN-TPGKFIVWFRNET 197
+ L+ L PG Y V + +++D ES T P T KF T
Sbjct: 1679 APDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTAIPAPTDLKFTQV--TPT 1736
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
+L W P P T Y+V + P + + + P + GL+ Y +S
Sbjct: 1737 SLSAQWTP--PNVQLTGYRVRVTPKEKTGPMKEINLA---PDSSSVVVSGLMVATKYEVS 1791
Query: 258 VQTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
V + + S P T+ P R T T ++ + W +Q
Sbjct: 1792 VYALKDTLTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQ 1845
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
V P TPI ++ + GL+PG Y++ + T++
Sbjct: 1846 VDAV---PANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLN 1887
Score = 142 (55.0 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 68/268 (25%), Positives = 105/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1092 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1142
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E A T + P + +T +L V W+ S
Sbjct: 1143 LTPGVEYVYTIQVLRDGQERDAPIVNKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1202
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + +E + F L PG YN+SV TV +D+ S P
Sbjct: 1203 I-TGYRITTTPTNGQQGNSL--EEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPI 1259
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P +I +++RV W PP + + V + P + + +
Sbjct: 1260 SDTI--IPAVPPPTDLRFTNIGPDTMRVTWAPPPSI-DLTNFLVRYS---PVKNEEDVAE 1313
Query: 331 SRDEPTQ-CDMSEGLEPGRTYQVLVKTV 357
P+ + L PG Y V V +V
Sbjct: 1314 LSISPSDNAVVLTNLLPGTEYVVSVSSV 1341
Score = 134 (52.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 78/337 (23%), Positives = 125/337 (37%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY-YTNSTVHDWLTWTASI 86
YR+ Y G+ P V K S PG Y +Y T + SI
Sbjct: 1478 YRITYGETGGNSPVQEFTVPGS-KSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISI 1536
Query: 87 T--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P+ + V + + W P S +G++ ++ + K P G T+
Sbjct: 1537 NYRTEIDKPSQMQVTDVQDNSISVKWLPS-SSPVTGYR---VTTTPKNGP---GPTKTKT 1589
Query: 145 AG-----YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
AG +++ L P Y V +++ S ES + T + P + ++
Sbjct: 1590 AGPDQTEMTIEGLQPTVEYVVSVYAQNPSGESQPLV-QTAVTNIDRPKGLAFTDVDVDSI 1648
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
+ W+ P + Y+V+ P+ L+ +GE A +GL PG Y +SV
Sbjct: 1649 KIAWES--PQGQVSRYRVTYSSPEDGIHELFPAPDGEED---TAELQGLRPGSEYTVSVV 1703
Query: 260 TVSEDEISTPTTAQYRT-IPL-RPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
+ +D S P T IP L FT +T SL W PP + Y+V +
Sbjct: 1704 ALHDDMESQPLIGTQSTAIPAPTDLKFT----QVTPTSLSAQWTPPN--VQLTGYRVRVT 1757
Query: 318 VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
+ I + D + + GL Y+V V
Sbjct: 1758 PKEKTGPMKEINLAPDSSSV--VVSGLMVATKYEVSV 1792
>UNIPROTKB|P02751 [details] [associations]
symbol:FN1 "Fibronectin" species:9606 "Homo sapiens"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0006953 "acute-phase
response" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0007044 "cell-substrate junction assembly" evidence=IEA]
[GO:0007161 "calcium-independent cell-matrix adhesion"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IEA]
[GO:0016504 "peptidase activator activity" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=NAS]
[GO:0007155 "cell adhesion" evidence=NAS] [GO:0008201 "heparin
binding" evidence=NAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=NAS] [GO:0005576 "extracellular region"
evidence=NAS;TAS] [GO:0016477 "cell migration" evidence=NAS]
[GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=NAS] [GO:0009611 "response
to wounding" evidence=NAS] [GO:0002576 "platelet degranulation"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0030168 "platelet activation" evidence=TAS] [GO:0031093
"platelet alpha granule lumen" evidence=TAS] [GO:0050900 "leukocyte
migration" evidence=TAS] [GO:0005577 "fibrinogen complex"
evidence=IDA] [GO:0018149 "peptide cross-linking" evidence=IDA]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IDA] Reactome:REACT_604
InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041
PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058
SMART:SM00060 Reactome:REACT_118779 Reactome:REACT_111102
GO:GO:0030168 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0008360
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0016324
GO:GO:0050900 SUPFAM:SSF49265 GO:GO:0006953 GO:GO:0031093
GO:GO:0005578 GO:GO:0002576 GO:GO:0005577 GO:GO:0030198
GO:GO:0008201 GO:GO:0016504 GO:GO:0001525 PROSITE:PS00022
GO:GO:0005518 Pathway_Interaction_DB:syndecan_4_pathway
eggNOG:NOG12793 Pathway_Interaction_DB:angiopoietinreceptor_pathway
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
Pathway_Interaction_DB:avb3_integrin_pathway
Pathway_Interaction_DB:lymphangiogenesis_pathway GO:GO:0005604
GO:GO:0005793 GO:GO:0018149 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR013806 SUPFAM:SSF57440
Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059
PROSITE:PS00023 PROSITE:PS51092 DrugBank:DB00015 GO:GO:0005201
PDB:3EJH PDB:3GXE PDBsum:3EJH PDBsum:3GXE PDB:2OCF PDBsum:2OCF
HOVERGEN:HBG005731 GO:GO:0007044 EMBL:AJ276395 EMBL:AJ535086
EMBL:AB191261 EMBL:AB209840 EMBL:AL832202 EMBL:BX537590
EMBL:BX538017 EMBL:BX538018 EMBL:BX640608 EMBL:BX640731
EMBL:BX640875 EMBL:BX640920 EMBL:CR749281 EMBL:CR749316
EMBL:CR749317 EMBL:AC012462 EMBL:BC117176 EMBL:M15801 EMBL:AF312399
EMBL:X02761 EMBL:U41850 EMBL:U42404 EMBL:U42592 EMBL:U42593
EMBL:U42594 EMBL:U42455 EMBL:U42456 EMBL:U42458 EMBL:U42457
EMBL:X07718 EMBL:X07717 EMBL:M18179 EMBL:M18177 EMBL:M18178
EMBL:M12549 EMBL:M10905 EMBL:M14059 EMBL:AJ320525 EMBL:AJ320526
EMBL:AJ320527 EMBL:M27589 EMBL:X04530 IPI:IPI00022418
IPI:IPI00339223 IPI:IPI00339224 IPI:IPI00339225 IPI:IPI00339226
IPI:IPI00339227 IPI:IPI00339228 IPI:IPI00339319 IPI:IPI00411462
IPI:IPI00414283 IPI:IPI00479723 IPI:IPI00556632 IPI:IPI00855777
IPI:IPI00855785 IPI:IPI00867588 PIR:A26460 PIR:I52394 PIR:S00848
RefSeq:NP_002017.1 RefSeq:NP_473375.2 RefSeq:NP_997639.1
RefSeq:NP_997641.1 RefSeq:NP_997643.1 RefSeq:NP_997647.1
UniGene:Hs.203717 PDB:1E88 PDB:1E8B PDB:1FBR PDB:1FNA PDB:1FNF
PDB:1FNH PDB:1J8K PDB:1O9A PDB:1OWW PDB:1Q38 PDB:1QGB PDB:1QO6
PDB:1TTF PDB:1TTG PDB:2CG6 PDB:2CG7 PDB:2CK2 PDB:2CKU PDB:2EC3
PDB:2FN2 PDB:2FNB PDB:2GEE PDB:2H41 PDB:2H45 PDB:2HA1 PDB:2RKY
PDB:2RKZ PDB:2RL0 PDB:3CAL PDB:3M7P PDB:3MQL PDB:3R8Q PDB:3ZRZ
PDB:4GH7 PDBsum:1E88 PDBsum:1E8B PDBsum:1FBR PDBsum:1FNA
PDBsum:1FNF PDBsum:1FNH PDBsum:1J8K PDBsum:1O9A PDBsum:1OWW
PDBsum:1Q38 PDBsum:1QGB PDBsum:1QO6 PDBsum:1TTF PDBsum:1TTG
PDBsum:2CG6 PDBsum:2CG7 PDBsum:2CK2 PDBsum:2CKU PDBsum:2EC3
PDBsum:2FN2 PDBsum:2FNB PDBsum:2GEE PDBsum:2H41 PDBsum:2H45
PDBsum:2HA1 PDBsum:2RKY PDBsum:2RKZ PDBsum:2RL0 PDBsum:3CAL
PDBsum:3M7P PDBsum:3MQL PDBsum:3R8Q PDBsum:3ZRZ PDBsum:4GH7
ProteinModelPortal:P02751 SMR:P02751 DIP:DIP-29547N IntAct:P02751
MINT:MINT-1779779 STRING:P02751 GlycoSuiteDB:P02751
PhosphoSite:P02751 DMDM:300669710 DOSAC-COBS-2DPAGE:P02751
PaxDb:P02751 PRIDE:P02751 DNASU:2335 Ensembl:ENST00000323926
Ensembl:ENST00000336916 Ensembl:ENST00000345488
Ensembl:ENST00000354785 Ensembl:ENST00000356005
Ensembl:ENST00000357009 Ensembl:ENST00000357867
Ensembl:ENST00000359671 Ensembl:ENST00000421182
Ensembl:ENST00000432072 Ensembl:ENST00000443816 GeneID:2335
KEGG:hsa:2335 UCSC:uc002vfa.3 UCSC:uc002vfb.3 UCSC:uc002vfc.3
UCSC:uc002vfe.3 UCSC:uc002vfg.3 UCSC:uc002vfi.3 UCSC:uc002vfj.3
CTD:2335 GeneCards:GC02M216225 HGNC:HGNC:3778 HPA:CAB000126
HPA:HPA027066 MIM:135600 MIM:601894 neXtProt:NX_P02751
Orphanet:84090 PharmGKB:PA28194 KO:K05717 OMA:IPGHLNS
BindingDB:P02751 ChEMBL:CHEMBL3810 ChiTaRS:FN1
EvolutionaryTrace:P02751 GenomeRNAi:2335 NextBio:9473
ArrayExpress:P02751 Bgee:P02751 Genevestigator:P02751
GermOnline:ENSG00000115414 GO:GO:0045340 GO:GO:0007161
Uniprot:P02751
Length = 2386
Score = 204 (76.9 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 86/306 (28%), Positives = 132/306 (43%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T++ V T T TTP P T+ SV + + + W S SG
Sbjct: 693 TRFDFTTTSTSTPVTS-NTVTGE-TTPFSPLVATSESVTEITASSFVVSWVSA-SDTVSG 749
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 750 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQT 808
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 809 TAPDAPPDTTVDQVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPET 861
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDK------ASITS 293
A + L PG YNI++ V E++ STP Q T P S T +T
Sbjct: 862 ANSVTLSDLQPGVQYNITIYAVEENQESTPVVIQQETTGT-PRSDTVPSPRDLQFVEVTD 920
Query: 294 NSLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+ ++W PP+ S Y+V I V PG + SR+ T +++ GL PG TY
Sbjct: 921 VKVTIMWTPPE--SAVTGYRVDVIPVNLPGEHGQRLPISRN--TFAEVT-GLSPGVTYYF 975
Query: 353 LVKTVS 358
V VS
Sbjct: 976 KVFAVS 981
Score = 201 (75.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 92/343 (26%), Positives = 145/343 (42%)
Query: 28 YRLDYIPA-----HGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLT 81
YR+D IP HG P +SR+ + GL PG Y F ++ S +
Sbjct: 937 YRVDVIPVNLPGEHGQRLP----ISRNTFAEVT---GLSPGVTYYFKVFAV-SHGRESKP 988
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
TA TT D PTNL + T + W+PP + +G++L V L+ + PR +
Sbjct: 989 LTAQQTTKLDAPTNLQFVNETDSTVLVRWTPP-RAQITGYRLTV-GLTRRGQPR--QYNV 1044
Query: 142 NPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE---T 197
P Y L++L P Y V L ++ ++ES T FTT PG I + E T
Sbjct: 1045 GPSVSKYPLRNLQPASEYTVSLVAIKGNQESPKATGV-FTTLQ--PGSSIPPYNTEVTET 1101
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
T+++ W P+ P +K+ + P E+ V + GL PG Y +
Sbjct: 1102 TIVITWTPA-PR---IGFKLGVRPSQGGEAPREVTSDS-----GSIVVSGLTPGVEYVYT 1152
Query: 258 VQTVSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSI 316
+Q + + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1153 IQVLRDGQERDAPIVNKVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITT 1210
Query: 317 NVR--RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G S + + + + C + L PG Y V V TV
Sbjct: 1211 TPTNGQQGNSLEEVVHA--DQSSCTF-DNLSPGLEYNVSVYTV 1250
Score = 201 (75.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 82/312 (26%), Positives = 137/312 (43%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 743 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEDGEQS 800
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 801 LILSTSQTTAPDAPPDTTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 858
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT-KPNT---PGKFIVWFRN 195
E + +L DL PG Y + +++V +++ES + TT P + P + F
Sbjct: 859 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVVIQQETTGTPRSDTVPSPRDLQFVE 917
Query: 196 ETTLLV--LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
T + V +W P P S T Y+V + P + P + G+ ++ F GL P
Sbjct: 918 VTDVKVTIMWTP--PESAVTGYRVDVIPVNLPG------EHGQRLPISRNTFAEVTGLSP 969
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y V VS S P TAQ T P + + + T +++ V W PP+ ++
Sbjct: 970 GVTYYFKVFAVSHGRESKPLTAQQTTKLDAPTNLQF--VNETDSTVLVRWTPPR--AQIT 1025
Query: 311 KYQVSINVRRPG 322
Y++++ + R G
Sbjct: 1026 GYRLTVGLTRRG 1037
Score = 190 (71.9 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 86/342 (25%), Positives = 138/342 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
++L P+ G P V+ D +I S PG +Y + + +
Sbjct: 1115 FKLGVRPSQGGEAPRE--VTSD-SGSIVVSGLTPGVEYVYTIQVLRDGQERDAPIVNKVV 1171
Query: 88 TPPDPPTNLSV--NVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
TP PPTNL + N +G + W + +G+++ + + + +
Sbjct: 1172 TPLSPPTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQS 1230
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN--ETTLLVLW 203
+ +L+PG Y V +++V D KESV + T P P + F N T+ V W
Sbjct: 1231 SCTFDNLSPGLEYNVSVYTVKDDKESVPISD---TIIPAVPPPTDLRFTNIGPDTMRVTW 1287
Query: 204 QPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
P P SI T++ V P E V E P A L+PG Y +SV +V
Sbjct: 1288 AP--PPSIDLTNFLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLLPGTEYVVSVSSVY 1342
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR--- 319
E STP + +T P D + IT+NS V W P+ + Y++ +
Sbjct: 1343 EQHESTPLRGRQKTGLDSPTGI--DFSDITANSFTVHWIAPR--ATITGYRIRHHPEHFS 1398
Query: 320 -RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
RP P SR+ T +++ PG Y V + ++G+
Sbjct: 1399 GRPREDRVP--HSRNSITLTNLT----PGTEYVVSIVALNGR 1434
Score = 174 (66.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 84/348 (24%), Positives = 147/348 (42%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D +++ +GL PG++Y +
Sbjct: 1648 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGEEDTAELQGLRPGSEYTVSVVA 1704
Query: 72 TNSTVHDW-LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
+ + L T S P PT+L + + W+PP + + +G++++V E
Sbjct: 1705 LHDDMESQPLIGTQSTAIPA--PTDLKFTQVTPTSLSAQWTPP-NVQLTGYRVRVTP-KE 1760
Query: 131 KTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PG 187
KT P + I + + + L Y+V ++++ D+ S TT N P
Sbjct: 1761 KTGPMKEINLAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPR 1818
Query: 188 KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG 247
+ V ETT+ + W+ T ++V P + + K P G
Sbjct: 1819 RARVTDATETTITISWRTK--TETITGFQVDAVPANGQTPIQRTIK----PDVRSYTITG 1872
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFS 307
L PG Y I + T++++ S+P T P + + + T NSL V W+PP+ +
Sbjct: 1873 LQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR--A 1928
Query: 308 EFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 1929 RITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIYV 1973
Score = 163 (62.4 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 77/352 (21%), Positives = 140/352 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y T
Sbjct: 1191 LTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVY-T 1249
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
+ + + +I PPT+L T ++ W+PP S + F ++ + +
Sbjct: 1250 VKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEE 1309
Query: 133 PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW 192
+ + + A L +L PG Y V + SVY+ ES R T + G +
Sbjct: 1310 DVAELSISPSDNA-VVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTG---ID 1365
Query: 193 FRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA-AFKGLV 249
F + T + V W P + T Y++ PE +E P + L
Sbjct: 1366 FSDITANSFTVHWIA--PRATITGYRIR----HHPEHFSGRPREDRVPHSRNSITLTNLT 1419
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG Y +S+ ++ E S Q T+ P + + T SL + W+ P +
Sbjct: 1420 PGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDL--EVVAATPTSLLISWDAPAVTVRY 1477
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y+++ G +S P+ + ++ + GL+PG Y + V V+G+
Sbjct: 1478 --YRITYG--ETGGNS-PVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGR 1524
Score = 158 (60.7 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 62/258 (24%), Positives = 103/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1752 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1809
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ + + +TP I T P
Sbjct: 1810 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAVPANGQTP---IQRTIKPDV 1865
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1866 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 1924
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 1925 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIYVIALKNN 1979
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 1980 QKSEPLIGRKKTDELPQL 1997
Score = 145 (56.1 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 81/345 (23%), Positives = 128/345 (37%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P P T + D E + EGL P +Y +Y N +
Sbjct: 1566 SSPVTGYRVTTTPKNG-PGPTKTKTAGP--DQTEMTIEGLQPTVEYVVSVYAQNPSGESQ 1622
Query: 80 -LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIG 138
L TA T D P L+ + +I W P G+ S +++ S E +
Sbjct: 1623 PLVQTA--VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFP 1678
Query: 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPN-TPGKFIVWFRNET 197
+ L+ L PG Y V + +++D ES T P T KF T
Sbjct: 1679 APDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTAIPAPTDLKFTQV--TPT 1736
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
+L W P P T Y+V + P + + + P + GL+ Y +S
Sbjct: 1737 SLSAQWTP--PNVQLTGYRVRVTPKEKTGPMKEINLA---PDSSSVVVSGLMVATKYEVS 1791
Query: 258 VQTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
V + + S P T+ P R T T ++ + W +Q
Sbjct: 1792 VYALKDTLTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQ 1845
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
V P TPI ++ + GL+PG Y++ + T++
Sbjct: 1846 VDAV---PANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLN 1887
Score = 142 (55.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 68/268 (25%), Positives = 105/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1092 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1142
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E A T + P + +T +L V W+ S
Sbjct: 1143 LTPGVEYVYTIQVLRDGQERDAPIVNKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1202
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + +E + F L PG YN+SV TV +D+ S P
Sbjct: 1203 I-TGYRITTTPTNGQQGNSL--EEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPI 1259
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P +I +++RV W PP + + V + P + + +
Sbjct: 1260 SDTI--IPAVPPPTDLRFTNIGPDTMRVTWAPPPSI-DLTNFLVRYS---PVKNEEDVAE 1313
Query: 331 SRDEPTQ-CDMSEGLEPGRTYQVLVKTV 357
P+ + L PG Y V V +V
Sbjct: 1314 LSISPSDNAVVLTNLLPGTEYVVSVSSV 1341
Score = 134 (52.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 78/337 (23%), Positives = 125/337 (37%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY-YTNSTVHDWLTWTASI 86
YR+ Y G+ P V K S PG Y +Y T + SI
Sbjct: 1478 YRITYGETGGNSPVQEFTVPGS-KSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISI 1536
Query: 87 T--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P+ + V + + W P S +G++ ++ + K P G T+
Sbjct: 1537 NYRTEIDKPSQMQVTDVQDNSISVKWLPS-SSPVTGYR---VTTTPKNGP---GPTKTKT 1589
Query: 145 AG-----YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
AG +++ L P Y V +++ S ES + T + P + ++
Sbjct: 1590 AGPDQTEMTIEGLQPTVEYVVSVYAQNPSGESQPLV-QTAVTNIDRPKGLAFTDVDVDSI 1648
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
+ W+ P + Y+V+ P+ L+ +GE A +GL PG Y +SV
Sbjct: 1649 KIAWES--PQGQVSRYRVTYSSPEDGIHELFPAPDGEED---TAELQGLRPGSEYTVSVV 1703
Query: 260 TVSEDEISTPTTAQYRT-IPL-RPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
+ +D S P T IP L FT +T SL W PP + Y+V +
Sbjct: 1704 ALHDDMESQPLIGTQSTAIPAPTDLKFT----QVTPTSLSAQWTPPN--VQLTGYRVRVT 1757
Query: 318 VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
+ I + D + + GL Y+V V
Sbjct: 1758 PKEKTGPMKEINLAPDSSSV--VVSGLMVATKYEVSV 1792
Score = 41 (19.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLVKT 356
+ W P F + +Y +S + G P+ + T ++ GL G TY V+V+
Sbjct: 2121 ISWAP---FQDTSEYIISCHP--VGTDEEPLQFRVPGTSTSATLT-GLTRGATYNVIVEA 2174
Query: 357 V 357
+
Sbjct: 2175 L 2175
>RGD|3886 [details] [associations]
symbol:Tnr "tenascin R" species:10116 "Rattus norvegicus"
[GO:0005178 "integrin binding" evidence=IPI] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO;IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007158 "neuron
cell-cell adhesion" evidence=ISO] [GO:0007162 "negative regulation of
cell adhesion" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008306 "associative learning" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0022029 "telencephalon cell migration" evidence=ISO] [GO:0022408
"negative regulation of cell-cell adhesion" evidence=ISO] [GO:0030198
"extracellular matrix organization" evidence=ISO] [GO:0030517
"negative regulation of axon extension" evidence=ISO] [GO:0035641
"locomotory exploration behavior" evidence=ISO] [GO:0045121 "membrane
raft" evidence=ISO] [GO:0048692 "negative regulation of axon
extension involved in regeneration" evidence=ISO] [GO:0050804
"regulation of synaptic transmission" evidence=ISO] [GO:0050805
"negative regulation of synaptic transmission" evidence=ISO]
[GO:0050808 "synapse organization" evidence=ISO] [GO:0050885
"neuromuscular process controlling balance" evidence=ISO] [GO:0051968
"positive regulation of synaptic transmission, glutamatergic"
evidence=ISO] [GO:0051971 "positive regulation of transmission of
nerve impulse" evidence=ISO] [GO:0060291 "long-term synaptic
potentiation" evidence=ISO] [GO:0072534 "perineuronal net"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 RGD:3886
INTERPRO:IPR002181 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0007399 GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0060291 SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0030198
GO:GO:0050885 GO:GO:0050808 GO:GO:0051968 GO:GO:0045121
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0008306 PROSITE:PS01186
GO:GO:0007162 GO:GO:0050805 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 GO:GO:0007158
InterPro:IPR013111 Pfam:PF07974 GO:GO:0022408 GO:GO:0035641
GO:GO:0022029 GO:GO:0072534 PDB:1TDQ PDBsum:1TDQ HOVERGEN:HBG008949
KO:K06252 HOGENOM:HOG000234355 CTD:7143 eggNOG:NOG311251
OrthoDB:EOG42FSGP GO:GO:0048692 EMBL:Z18630 IPI:IPI00190669
IPI:IPI00554031 PIR:A45445 RefSeq:NP_037177.1 UniGene:Rn.11028
UniGene:Rn.131578 ProteinModelPortal:Q05546 SMR:Q05546 IntAct:Q05546
STRING:Q05546 PhosphoSite:Q05546 PRIDE:Q05546 GeneID:25567
KEGG:rno:25567 InParanoid:Q05546 EvolutionaryTrace:Q05546
NextBio:607175 ArrayExpress:Q05546 Genevestigator:Q05546
GermOnline:ENSRNOG00000002468 Uniprot:Q05546
Length = 1356
Score = 201 (75.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 89/314 (28%), Positives = 133/314 (42%)
Query: 52 DNIEFSE-GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF 109
D F++ GL PG +Y + T +AS++T D PT + V S A +
Sbjct: 464 DVTSFNQTGLKPGEEYIVNVVALKEQARGPPT-SASVSTVIDGPTQILVRDVSDTVAFVE 522
Query: 110 WSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166
W+PP K LK V KT R+ + P + YS++ L PG Y+V + +V
Sbjct: 523 WTPP-RAKVDFILLKYGLVGGEGGKTTFRL----QPPLSQYSVQALRPGSRYEVSISAVR 577
Query: 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE 226
+ ES A +S FTT+ + P V R T+L + W S + YKV +
Sbjct: 578 GTNESDA-SSTQFTTEIDAPKNLRVGSRTATSLDLEWDNSEAEA--QEYKVVYSTLAGEQ 634
Query: 227 SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTY 286
+ +G P + LVPG Y + + V + S P T RT P
Sbjct: 635 YHEVLVPKGIGP-TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSPRDLMV 693
Query: 287 DKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEP 346
+S TS SL +W G D Y+++ G SS +T RD T +++ LEP
Sbjct: 694 TASSETSISL--IWTKASG--PIDHYRITFTPSS-GISSE-VTVPRDR-TSYTLTD-LEP 745
Query: 347 GRTYQVLVKTVSGK 360
G Y + + G+
Sbjct: 746 GAEYIISITAERGR 759
Score = 139 (54.0 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 65/274 (23%), Positives = 118/274 (43%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPIS-GKYS-GFK--LKVISLSEKTPPRIIGFTENPPAGY 147
PP +L V S ++ ++ W P++ +Y ++ L + L ++ P +G
Sbjct: 328 PPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPSLGGLQLQQRVP--------GDWSGV 379
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207
++ +L PG +Y + +++V + S+ T++ T +TP ETT+ V W+P +
Sbjct: 380 TITELEPGLTYNISVYAVISNILSLPITAK-VATHLSTPQGLQFKTITETTVEVQWEP-F 437
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK-GLVPGRAYNISVQTVSEDEI 266
S + +++S P + V+ + P + + GL PG Y ++V + E
Sbjct: 438 SFS-FDGWEISFTPKNNEGGVI-----AQLPSDVTSFNQTGLKPGEEYIVNVVALKEQAR 491
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST 326
PT+A T+ P S T V W PP+ +F + + V G +T
Sbjct: 492 GPPTSASVSTVIDGPTQILVRDVSDTVAF--VEWTPPRAKVDFILLKYGL-VGGEGGKTT 548
Query: 327 PITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSG 359
R +P S + L PG Y+V + V G
Sbjct: 549 ----FRLQPPLSQYSVQALRPGSRYEVSISAVRG 578
Score = 139 (54.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 72/308 (23%), Positives = 124/308 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
+PGT+Y + ++ + T + T D P +L V S + + W+ SG
Sbjct: 656 VPGTEYGVGISAVMNSKQS-IPATMNARTELDSPRDLMVTASSETSISLIWTKA-SGPID 713
Query: 120 GFKLKV-----ISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAY 174
+++ IS SE T PR Y+L DL PG Y + + + ++S+
Sbjct: 714 HYRITFTPSSGIS-SEVTVPR-------DRTSYTLTDLEPGAEYIISITAERGRQQSLES 765
Query: 175 TSRNFTT-KPNTPGKFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVE 232
T FT +P + F +++ + W PS PA ++ P D E ++ V
Sbjct: 766 TVDAFTGFRPISHLHFS--HVTSSSVNITWSDPSPPAD---RLILNYSPRDEEEEMMEVL 820
Query: 233 KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASIT 292
+ A GL P Y +++ V S P T P + T +++T
Sbjct: 821 LDATK---RHAVLMGLQPATEYIVNLVAVHGTVTSEPIVGSITTGIDPPKNITI--SNVT 875
Query: 293 SNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+SL V W PP ++ +Y + R +S P T + T+ L P Y++
Sbjct: 876 KDSLTVSWSPPVAPFDYYEYPIDHPSGRLDSSVVPNTVTEFTITR------LYPASQYEI 929
Query: 353 LVKTVSGK 360
+ +V G+
Sbjct: 930 SLNSVRGR 937
Score = 134 (52.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 57/252 (22%), Positives = 106/252 (42%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGK 117
GL P T+Y L + TV SITT DPP N++++ + + + WSPP++
Sbjct: 832 GLQPATEYIVNLVAVHGTVTSEPI-VGSITTGIDPPKNITISNVTKDSLTVSWSPPVA-P 889
Query: 118 YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSR 177
+ ++ + S + ++ N +++ L P Y++ L SV +ES +
Sbjct: 890 FDYYEYPIDHPSGRLDSSVV---PNTVTEFTITRLYPASQYEISLNSVRGREESERICTL 946
Query: 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP-PDAPESVLYVEKEGE 236
T ++P I T L+ W+ P +Y + + A E++L V+ E
Sbjct: 947 VHTAM-DSPMDLIATNITPTEALLQWKA--PMGEVENYVIVLTHFAMAGETIL-VDGVSE 1002
Query: 237 PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
+ L+P Y +++ S +S + T+ P + T + +T S
Sbjct: 1003 -----EFQLVDLLPRTHYTVTMYATSGPLVSGTIATNFSTLLDPPANLT--ASEVTRQSA 1055
Query: 297 RVVWEPPKGFSE 308
+ W+PP+ E
Sbjct: 1056 LISWQPPRAAIE 1067
Score = 132 (51.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 65/305 (21%), Positives = 119/305 (39%)
Query: 54 IEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPP 113
+ +E PG Y+ +Y S + L TA + T P L + T ++ W P
Sbjct: 379 VTITELEPGLTYNISVYAVISNILS-LPITAKVATHLSTPQGLQFKTITETTVEVQWEP- 436
Query: 114 ISGKYSGFKLKVISLSEKTPPR-IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV 172
S + G++ IS + K +I + ++ L PG Y V + ++ +
Sbjct: 437 FSFSFDGWE---ISFTPKNNEGGVIAQLPSDVTSFNQTGLKPGEEYIVNVVALKEQARGP 493
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVE 232
TS + +T + P + +V ++T V W P + K + + ++ ++
Sbjct: 494 P-TSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQ 552
Query: 233 KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASIT 292
PP +Q + + L PG Y +S+ V S ++ Q+ T P + S T
Sbjct: 553 ----PP-LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPKNLRV--GSRT 605
Query: 293 SNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+ SL + W+ + +E +Y+V + + PT L PG Y V
Sbjct: 606 ATSLDLEWDNSE--AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGV 663
Query: 353 LVKTV 357
+ V
Sbjct: 664 GISAV 668
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 43 TTYVSRDIKDNIEFSEGLPG-TKYDFYL 69
T + RD+ D + F E P K DF L
Sbjct: 507 TQILVRDVSDTVAFVEWTPPRAKVDFIL 534
>UNIPROTKB|B8Y9T0 [details] [associations]
symbol:FN1 "Cumulus cell-specific fibronectin 1 transcript
variant" species:9913 "Bos taurus" [GO:0005576 "extracellular
region" evidence=IEA] InterPro:IPR000083 InterPro:IPR003961
Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253 PROSITE:PS50853
PROSITE:PS51091 SMART:SM00058 SMART:SM00060 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GeneTree:ENSGT00700000104067 UniGene:Bt.23418
HOVERGEN:HBG005731 EMBL:DAAA02005870 EMBL:FJ513188 IPI:IPI01028178
Ensembl:ENSBTAT00000010926 Uniprot:B8Y9T0
Length = 2268
Score = 203 (76.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 85/349 (24%), Positives = 150/349 (42%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 744 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYTVNVYEISEEGEQN 801
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 802 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-RAPITGYRI-VYSPSVEGSSTELNL 859
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT----PGKFIVWFR 194
E + +L DL PG Y + +++V +++ES + + T P + P + + +
Sbjct: 860 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVE 918
Query: 195 -NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
+ + ++W P P S T Y+V + P + P + G+ ++ F GL P
Sbjct: 919 VTDVKITIMWTP--PESPVTGYRVDVIPVNLPG------EHGQRLPVSRNTFAEVTGLSP 970
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y+ V V++ S P TAQ T P + + + T ++ V W PP+ +
Sbjct: 971 GVTYHFKVFAVNQGRESKPLTAQQATKLDAPTNLQF--INETDTTVIVTWTPPR--ARIV 1026
Query: 311 KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
Y++++ + R G +Q + L+PG Y V + V G
Sbjct: 1027 GYRLTVGLTRGGQPKQ--YNVGPAASQYPL-RNLQPGSEYAVSLVAVKG 1072
Score = 202 (76.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 84/305 (27%), Positives = 131/305 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T+ V T T TTP P T+ SV + + + W S SG
Sbjct: 694 TRFDFTTTSTSPAVTS-NTVTGE-TTPLSPVVATSESVTEITASSFVVSWVSA-SDTVSG 750
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 751 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYTVNVYEISEEGEQNLILSTSQT 809
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 810 TAPDAPPDPTVDQVDDTSIVVRW--SRPRAPITGYRIVYSP-----SVEGSSTELNLPET 862
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSN 294
A + L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 863 ANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVEVTDV 922
Query: 295 SLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353
+ ++W PP+ S Y+V I V PG + SR+ T +++ GL PG TY
Sbjct: 923 KITIMWTPPE--SPVTGYRVDVIPVNLPGEHGQRLPVSRN--TFAEVT-GLSPGVTYHFK 977
Query: 354 VKTVS 358
V V+
Sbjct: 978 VFAVN 982
Score = 196 (74.1 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 90/340 (26%), Positives = 139/340 (40%)
Query: 28 YRLDYIPA-----HGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLT 81
YR+D IP HG P VSR+ + GL PG Y F ++ N +
Sbjct: 938 YRVDVIPVNLPGEHGQRLP----VSRNTFAEVT---GLSPGVTYHFKVFAVNQG-RESKP 989
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
TA T D PTNL + T + W+PP + G++L V L+ P+ +
Sbjct: 990 LTAQQATKLDAPTNLQFINETDTTVIVTWTPP-RARIVGYRLTV-GLTRGGQPK--QYNV 1045
Query: 142 NPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
P A Y L++L PG Y V L +V +++S T T +P ETT++
Sbjct: 1046 GPAASQYPLRNLQPGSEYAVSLVAVKGNQQSPRVTGVFTTLQPLGSIPHYNTEVTETTIV 1105
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W P+ P +K+ + P E+ V E GL PG Y ++
Sbjct: 1106 ITWTPA-PR---IGFKLGVRPSQGGEAPREVTSES-----GSIVVSGLTPGVEYVYTISV 1156
Query: 261 VSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1157 LRDGQERDAPIVKKVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITTTPT 1214
Query: 320 --RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G S + + + + C E L PG Y V V TV
Sbjct: 1215 NGQQGYSLEEVVHA--DQSSCTF-ENLSPGLEYNVSVYTV 1251
Score = 191 (72.3 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 87/341 (25%), Positives = 143/341 (41%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P T V D E + EGL P +Y +Y N
Sbjct: 1658 SSPVTGYRVTTAPKNGPGPSKTKTVG---PDQTEMTIEGLQPTVEYVVSVYAQNQNGESQ 1714
Query: 80 LTWTASITTPPDPPTNLSVN--VRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPP-RI 136
++TT P PTNL + TAQ W+ P + + +G++++V EKT P +
Sbjct: 1715 PLVQTAVTTIP-APTNLKFTQVTPTSLTAQ--WTAP-NVQLTGYRVRVTP-KEKTGPMKE 1769
Query: 137 IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PGKFIVWFR 194
I + + + L Y+V ++++ D+ S TT N P + V
Sbjct: 1770 INLAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPRRARVTDA 1827
Query: 195 NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254
ETT+ + W+ T ++V P + + + P GL PG Y
Sbjct: 1828 TETTITISWRTK--TETITGFQVDAIPANGQTPIQRTIR----PDVRSYTITGLQPGTDY 1881
Query: 255 NISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
I + T++++ S+P T P + + + T NSL V W+PP+ + Y
Sbjct: 1882 KIHLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR--ARITGY-- 1935
Query: 315 SINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 1936 IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIQV 1975
Score = 190 (71.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 85/352 (24%), Positives = 141/352 (40%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y
Sbjct: 1192 LTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTV 1251
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1252 KD---DKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1308
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1309 GIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1366
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P+SI T+ V P E V E P A L+
Sbjct: 1367 FTNVGPDTMRVTWAP--PSSIELTNLLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLL 1421
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG Y +SV +V E S P + +T P D + IT+NS V W P+ +
Sbjct: 1422 PGTEYLVSVSSVYEQHESIPLRGRQKTALDSPSGI--DFSDITANSFTVHWIAPR--ATI 1477
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y++ + G P + R P++ ++ L PG Y V + ++ K
Sbjct: 1478 TGYRIRHHPENMGGR--P-REDRVPPSRNSITLTNLNPGTEYVVSIVALNSK 1526
Score = 170 (64.9 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 75/308 (24%), Positives = 125/308 (40%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 1328 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNVGPDTMRVTWAPPSSI 1385
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ + ++ + + + + + A L +L PG Y V + SVY+ ES+
Sbjct: 1386 ELTNLLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRG 1444
Query: 177 RNFTTKPNTPGKFIVWFRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
R T + G + F + T + V W P + T Y++ PE++ +E
Sbjct: 1445 RQKTALDSPSG---IDFSDITANSFTVHWIA--PRATITGYRIR----HHPENMGGRPRE 1495
Query: 235 GE-PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
PP L PG Y +S+ ++ E S P Q T+ P + + T
Sbjct: 1496 DRVPPSRNSITLTNLNPGTEYVVSIVALNSKEESLPLVGQQSTVSDVPRDL--EVIAATP 1553
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQV 352
SL + W+ P + Y+++ G SS P+ + ++ + GL+PG Y +
Sbjct: 1554 TSLLISWDAPAVTVRY--YRITYG--ETGGSS-PVQEFTVPGSKSTATISGLKPGVDYTI 1608
Query: 353 LVKTVSGK 360
V V+G+
Sbjct: 1609 TVYAVTGR 1616
Score = 161 (61.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 61/252 (24%), Positives = 101/252 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1754 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1811
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + +TP I T P
Sbjct: 1812 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQTP---IQRTIRPDV 1867
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1868 RSYTITGLQPGTDYKIHLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 1926
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 1927 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIQVIALKNN 1981
Query: 265 EISTPTTAQYRT 276
+ S P + +T
Sbjct: 1982 QKSEPLIGRKKT 1993
Score = 152 (58.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 68/255 (26%), Positives = 104/255 (40%)
Query: 105 TAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164
T I W+P GFKL V PR + +E+ + LTPG Y +
Sbjct: 1103 TIVITWTP---APRIGFKLGVRPSQGGEAPREVT-SES--GSIVVSGLTPGVEYVYTISV 1156
Query: 165 VYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPASIYTHYKVSIDPPD 223
+ D +E A + T + P + +T +L V W+ S I T Y+++ P +
Sbjct: 1157 LRDGQERDAPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPDI-TGYRITTTPTN 1215
Query: 224 APESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS 283
+ Y +E + F+ L PG YN+SV TV +D+ S P + IP P
Sbjct: 1216 GQQG--YSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPISDTI--IPEVPQL 1271
Query: 284 FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSR-DEPTQCDMSE 342
IT +S+ + W P S Y++++ G PI + D
Sbjct: 1272 TDLSFVDITDSSIGLRWTPLNS-STIIGYRITVVAAGEGI---PIFEDFVDSSVGYYTVT 1327
Query: 343 GLEPGRTYQVLVKTV 357
GLEPG Y + V T+
Sbjct: 1328 GLEPGIDYDISVITL 1342
Score = 133 (51.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 82/320 (25%), Positives = 129/320 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGK--TAQIFWSPPIS 115
L G +Y Y Y + +W + T PD P + + + + I WS P S
Sbjct: 581 LQGVRYQCYCY--GRGIGEWAC--QPLQTYPDTSGPVQVIITETPSQPNSHPIQWSAPES 636
Query: 116 GKYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSV--YDSKESV 172
S + L+ + +P R T Y++K L PG Y+ QL SV Y +E
Sbjct: 637 SHISKYILRW--KPKNSPNRWKEATIPGHLNSYTIKGLRPGVVYEGQLISVQHYGQREVT 694
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNETTLL---VLWQPSYPASIYTHYKVS-IDPPDAPES- 227
+ +FTT +P ETT L V S + + VS + D
Sbjct: 695 RF---DFTTTSTSPAVTSNTVTGETTPLSPVVATSESVTEITASSFVVSWVSASDTVSGF 751
Query: 228 -VLY-VEKEGEPPG----PAQAA---FKGLVPGRAYNISVQTVSED-EISTPTTAQYRTI 277
V Y + +EG+ P P+ A L+PGR Y ++V +SE+ E + + T
Sbjct: 752 RVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYTVNVYEISEEGEQNLILSTSQTTA 811
Query: 278 PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQ 337
P P T D+ TS +R W P+ + Y++ + G SST + +
Sbjct: 812 PDAPPDPTVDQVDDTSIVVR--WSRPR--APITGYRIVYSPSVEG-SSTELNLP-ETANS 865
Query: 338 CDMSEGLEPGRTYQVLVKTV 357
+S+ L+PG Y + + V
Sbjct: 866 VTLSD-LQPGVQYNITIYAV 884
Score = 125 (49.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 46/186 (24%), Positives = 80/186 (43%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLTWTASI 86
+++D IPA+G P T + D++ GL PGT Y +LY N
Sbjct: 1846 FQVDAIPANGQTPIQRT-IRPDVRSYT--ITGLQPGTDYKIHLYTLNDNARSSPV-VIDA 1901
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK--TPPRIIGFTENPP 144
+T D P+NL + + + W PP + +G+ +K EK +PPR + P
Sbjct: 1902 STAIDAPSNLRFLATTPNSLLVSWQPP-RARITGYIIKY----EKPGSPPREV--VPRPR 1954
Query: 145 AGYS---LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW--FRNETTL 199
G + + L PG Y +Q+ ++ ++++S R T + I W F+ +
Sbjct: 1955 PGVTEATITGLEPGTEYTIQVIALKNNQKSEPLIGRKKTGQEALSQTTISWTPFQESSEY 2014
Query: 200 LVLWQP 205
++ P
Sbjct: 2015 IISCHP 2020
Score = 61 (26.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 21/71 (29%), Positives = 29/71 (40%)
Query: 195 NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254
++TT + W P +S Y +S P E L G A A GL G Y
Sbjct: 1999 SQTT--ISWTPFQESS---EYIISCHPVGIDEEPLQFRVPGTS---ASATLTGLTRGATY 2050
Query: 255 NISVQTVSEDE 265
NI V+ V + +
Sbjct: 2051 NIIVEAVKDQQ 2061
>UNIPROTKB|B8Y9S9 [details] [associations]
symbol:FN1 "Fibronectin" species:9913 "Bos taurus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GeneTree:ENSGT00700000104067 UniGene:Bt.23418
HOVERGEN:HBG005731 CTD:2335 KO:K05717 EMBL:DAAA02005870
EMBL:FJ513187 IPI:IPI00714673 RefSeq:NP_001157250.1
Ensembl:ENSBTAT00000010922 GeneID:280794 KEGG:bta:280794
NextBio:20804950 Uniprot:B8Y9S9
Length = 2387
Score = 203 (76.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 85/349 (24%), Positives = 150/349 (42%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 744 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYTVNVYEISEEGEQN 801
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 802 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-RAPITGYRI-VYSPSVEGSSTELNL 859
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT----PGKFIVWFR 194
E + +L DL PG Y + +++V +++ES + + T P + P + + +
Sbjct: 860 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVE 918
Query: 195 -NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
+ + ++W P P S T Y+V + P + P + G+ ++ F GL P
Sbjct: 919 VTDVKITIMWTP--PESPVTGYRVDVIPVNLPG------EHGQRLPVSRNTFAEVTGLSP 970
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y+ V V++ S P TAQ T P + + + T ++ V W PP+ +
Sbjct: 971 GVTYHFKVFAVNQGRESKPLTAQQATKLDAPTNLQF--INETDTTVIVTWTPPR--ARIV 1026
Query: 311 KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
Y++++ + R G +Q + L+PG Y V + V G
Sbjct: 1027 GYRLTVGLTRGGQPKQ--YNVGPAASQYPL-RNLQPGSEYAVSLVAVKG 1072
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 84/305 (27%), Positives = 131/305 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T+ V T T TTP P T+ SV + + + W S SG
Sbjct: 694 TRFDFTTTSTSPAVTS-NTVTGE-TTPLSPVVATSESVTEITASSFVVSWVSA-SDTVSG 750
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 751 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYTVNVYEISEEGEQNLILSTSQT 809
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 810 TAPDAPPDPTVDQVDDTSIVVRW--SRPRAPITGYRIVYSP-----SVEGSSTELNLPET 862
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSN 294
A + L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 863 ANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVEVTDV 922
Query: 295 SLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353
+ ++W PP+ S Y+V I V PG + SR+ T +++ GL PG TY
Sbjct: 923 KITIMWTPPE--SPVTGYRVDVIPVNLPGEHGQRLPVSRN--TFAEVT-GLSPGVTYHFK 977
Query: 354 VKTVS 358
V V+
Sbjct: 978 VFAVN 982
Score = 196 (74.1 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 90/340 (26%), Positives = 139/340 (40%)
Query: 28 YRLDYIPA-----HGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLT 81
YR+D IP HG P VSR+ + GL PG Y F ++ N +
Sbjct: 938 YRVDVIPVNLPGEHGQRLP----VSRNTFAEVT---GLSPGVTYHFKVFAVNQG-RESKP 989
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
TA T D PTNL + T + W+PP + G++L V L+ P+ +
Sbjct: 990 LTAQQATKLDAPTNLQFINETDTTVIVTWTPP-RARIVGYRLTV-GLTRGGQPK--QYNV 1045
Query: 142 NPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
P A Y L++L PG Y V L +V +++S T T +P ETT++
Sbjct: 1046 GPAASQYPLRNLQPGSEYAVSLVAVKGNQQSPRVTGVFTTLQPLGSIPHYNTEVTETTIV 1105
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W P+ P +K+ + P E+ V E GL PG Y ++
Sbjct: 1106 ITWTPA-PR---IGFKLGVRPSQGGEAPREVTSES-----GSIVVSGLTPGVEYVYTISV 1156
Query: 261 VSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1157 LRDGQERDAPIVKKVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITTTPT 1214
Query: 320 --RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G S + + + + C E L PG Y V V TV
Sbjct: 1215 NGQQGYSLEEVVHA--DQSSCTF-ENLSPGLEYNVSVYTV 1251
Score = 186 (70.5 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 79/352 (22%), Positives = 144/352 (40%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y T
Sbjct: 1192 LTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVY-T 1250
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
+ + + +I PPT+L T ++ W+PP S + + ++ + +
Sbjct: 1251 VKDDKESVPISDTIIPAVPPPTDLRFTNVGPDTMRVTWAPPSSIELTNLLVRYSPVKNEE 1310
Query: 133 PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW 192
+ + + A L +L PG Y V + SVY+ ES+ R T + G +
Sbjct: 1311 DVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRGRQKTALDSPSG---ID 1366
Query: 193 FRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE-PPGPAQAAFKGLV 249
F + T + V W P + T Y++ PE++ +E PP L
Sbjct: 1367 FSDITANSFTVHWIA--PRATITGYRIR----HHPENMGGRPREDRVPPSRNSITLTNLN 1420
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG Y +S+ ++ E S P Q T+ P + + T SL + W+ P +
Sbjct: 1421 PGTEYVVSIVALNSKEESLPLVGQQSTVSDVPRDL--EVIAATPTSLLISWDAPAVTVRY 1478
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y+++ G SS P+ + ++ + GL+PG Y + V V+G+
Sbjct: 1479 --YRITYG--ETGGSS-PVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGR 1525
Score = 167 (63.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 86/350 (24%), Positives = 147/350 (42%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D ++ +GL PG++Y +
Sbjct: 1649 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGEEETAELQGLRPGSEYTVSVVA 1705
Query: 72 TNSTVHDW-LTWTASITTPPDPPTNLSVN--VRSGKTAQIFWSPPISGKYSGFKLKVISL 128
+ + L T S P PTNL + TAQ W+ P + + +G++++V
Sbjct: 1706 LHDDMESQPLIGTQSTAIPA--PTNLKFTQVTPTSLTAQ--WTAP-NVQLTGYRVRVTP- 1759
Query: 129 SEKTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT-- 185
EKT P + I + + + L Y+V ++++ D+ S TT N
Sbjct: 1760 KEKTGPMKEINLAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSP 1817
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
P + V ETT+ + W+ T ++V P + + + P
Sbjct: 1818 PRRARVTDATETTITISWRTK--TETITGFQVDAIPANGQTPIQRTIR----PDVRSYTI 1871
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
GL PG Y I + T++++ S+P T P + + + T NSL V W+PP+
Sbjct: 1872 TGLQPGTDYKIHLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR- 1928
Query: 306 FSEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
+ Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 1929 -ARITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIQV 1974
Score = 162 (62.1 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 63/258 (24%), Positives = 103/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1753 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1810
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + +TP I T P
Sbjct: 1811 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQTP---IQRTIRPDV 1866
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1867 RSYTITGLQPGTDYKIHLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 1925
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 1926 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIQVIALKNN 1980
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 1981 QKSEPLIGRKKTDELPQL 1998
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 65/255 (25%), Positives = 103/255 (40%)
Query: 105 TAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164
T I W+P GFKL V PR + +E+ + LTPG Y +
Sbjct: 1103 TIVITWTP---APRIGFKLGVRPSQGGEAPREVT-SES--GSIVVSGLTPGVEYVYTISV 1156
Query: 165 VYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPASIYTHYKVSIDPPD 223
+ D +E A + T + P + +T +L V W+ S I T Y+++ P +
Sbjct: 1157 LRDGQERDAPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPDI-TGYRITTTPTN 1215
Query: 224 APESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS 283
+ Y +E + F+ L PG YN+SV TV +D+ S P + IP P
Sbjct: 1216 GQQG--YSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPISDTI--IPAVPPP 1271
Query: 284 FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQ-CDMSE 342
++ +++RV W PP E V + P + + + P+ +
Sbjct: 1272 TDLRFTNVGPDTMRVTWAPPSSI-ELTNLLVRYS---PVKNEEDVAELSISPSDNAVVLT 1327
Query: 343 GLEPGRTYQVLVKTV 357
L PG Y V V +V
Sbjct: 1328 NLLPGTEYLVSVSSV 1342
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 78/344 (22%), Positives = 124/344 (36%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P T V D E + EGL P +Y +Y N
Sbjct: 1567 SSPVTGYRVTTAPKNGPGPSKTKTVG---PDQTEMTIEGLQPTVEYVVSVYAQNQNGESQ 1623
Query: 80 -LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIG 138
L TA T D P L+ + +I W P G+ S +++ S E +
Sbjct: 1624 PLVQTA--VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFP 1679
Query: 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETT 198
+ L+ L PG Y V + +++D ES T P P T+
Sbjct: 1680 APDGEEETAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTAIP-APTNLKFTQVTPTS 1738
Query: 199 LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
L W + P T Y+V + P + + + P + GL+ Y +SV
Sbjct: 1739 LTAQW--TAPNVQLTGYRVRVTPKEKTGPMKEINLA---PDSSSVVVSGLMVATKYEVSV 1793
Query: 259 QTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+ + S P T+ P R T T ++ + W +QV
Sbjct: 1794 YALKDTLTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQV 1847
Query: 315 SINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P TPI ++ + GL+PG Y++ + T++
Sbjct: 1848 DAI---PANGQTPIQRTIRPDVRSYTITGLQPGTDYKIHLYTLN 1888
Score = 133 (51.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 82/320 (25%), Positives = 129/320 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGK--TAQIFWSPPIS 115
L G +Y Y Y + +W + T PD P + + + + I WS P S
Sbjct: 581 LQGVRYQCYCY--GRGIGEWAC--QPLQTYPDTSGPVQVIITETPSQPNSHPIQWSAPES 636
Query: 116 GKYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSV--YDSKESV 172
S + L+ + +P R T Y++K L PG Y+ QL SV Y +E
Sbjct: 637 SHISKYILRW--KPKNSPNRWKEATIPGHLNSYTIKGLRPGVVYEGQLISVQHYGQREVT 694
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNETTLL---VLWQPSYPASIYTHYKVS-IDPPDAPES- 227
+ +FTT +P ETT L V S + + VS + D
Sbjct: 695 RF---DFTTTSTSPAVTSNTVTGETTPLSPVVATSESVTEITASSFVVSWVSASDTVSGF 751
Query: 228 -VLY-VEKEGEPPG----PAQAA---FKGLVPGRAYNISVQTVSED-EISTPTTAQYRTI 277
V Y + +EG+ P P+ A L+PGR Y ++V +SE+ E + + T
Sbjct: 752 RVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYTVNVYEISEEGEQNLILSTSQTTA 811
Query: 278 PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQ 337
P P T D+ TS +R W P+ + Y++ + G SST + +
Sbjct: 812 PDAPPDPTVDQVDDTSIVVR--WSRPR--APITGYRIVYSPSVEG-SSTELNLP-ETANS 865
Query: 338 CDMSEGLEPGRTYQVLVKTV 357
+S+ L+PG Y + + V
Sbjct: 866 VTLSD-LQPGVQYNITIYAV 884
Score = 46 (21.3 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKT 356
+ W P F E +Y +S + G P+ + R T + GL G TY ++V+
Sbjct: 2122 ISWTP---FQESSEYIISCHP--VGIDEEPL-QFRVPGTSASATLTGLTRGATYNIIVEA 2175
Query: 357 V 357
V
Sbjct: 2176 V 2176
>UNIPROTKB|P07589 [details] [associations]
symbol:FN1 "Fibronectin" species:9913 "Bos taurus"
[GO:0010952 "positive regulation of peptidase activity"
evidence=ISS] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISS] [GO:0042060 "wound healing" evidence=ISS] [GO:0016504
"peptidase activator activity" evidence=ISS] [GO:0016324 "apical
plasma membrane" evidence=ISS] [GO:0007160 "cell-matrix adhesion"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=ISS] [GO:0007044
"cell-substrate junction assembly" evidence=ISS] [GO:0008360
"regulation of cell shape" evidence=IEA] [GO:0008201 "heparin
binding" evidence=IEA] [GO:0006953 "acute-phase response"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA]
InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041
PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058
SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0008360
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0006953 GO:GO:0005578
GO:GO:0008201 GO:GO:0016504 GO:GO:0001525 PROSITE:PS00022
GO:GO:0007160 eggNOG:NOG12793 GO:GO:0042060 InterPro:IPR013806
SUPFAM:SSF57440 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040
SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 EMBL:AAFC03125045
EMBL:AAFC03065407 EMBL:K00800 IPI:IPI00728875 PIR:A26452
UniGene:Bt.23418 ProteinModelPortal:P07589 STRING:P07589
PRIDE:P07589 HOGENOM:HOG000234344 HOVERGEN:HBG005731 GO:GO:0007044
Uniprot:P07589
Length = 2478
Score = 203 (76.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 85/349 (24%), Positives = 150/349 (42%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 744 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYTVNVYEISEEGEQN 801
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 802 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-RAPITGYRI-VYSPSVEGSSTELNL 859
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT----PGKFIVWFR 194
E + +L DL PG Y + +++V +++ES + + T P + P + + +
Sbjct: 860 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVE 918
Query: 195 -NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
+ + ++W P P S T Y+V + P + P + G+ ++ F GL P
Sbjct: 919 VTDVKITIMWTP--PESPVTGYRVDVIPVNLPG------EHGQRLPVSRNTFAEVTGLSP 970
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y+ V V++ S P TAQ T P + + + T ++ V W PP+ +
Sbjct: 971 GVTYHFKVFAVNQGRESKPLTAQQATKLDAPTNLQF--INETDTTVIVTWTPPR--ARIV 1026
Query: 311 KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
Y++++ + R G +Q + L+PG Y V + V G
Sbjct: 1027 GYRLTVGLTRGGQPKQ--YNVGPAASQYPL-RNLQPGSEYAVSLVAVKG 1072
Score = 202 (76.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 84/305 (27%), Positives = 131/305 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T+ V T T TTP P T+ SV + + + W S SG
Sbjct: 694 TRFDFTTTSTSPAVTS-NTVTGE-TTPLSPVVATSESVTEITASSFVVSWVSA-SDTVSG 750
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 751 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYTVNVYEISEEGEQNLILSTSQT 809
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 810 TAPDAPPDPTVDQVDDTSIVVRW--SRPRAPITGYRIVYSP-----SVEGSSTELNLPET 862
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSN 294
A + L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 863 ANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVEVTDV 922
Query: 295 SLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353
+ ++W PP+ S Y+V I V PG + SR+ T +++ GL PG TY
Sbjct: 923 KITIMWTPPE--SPVTGYRVDVIPVNLPGEHGQRLPVSRN--TFAEVT-GLSPGVTYHFK 977
Query: 354 VKTVS 358
V V+
Sbjct: 978 VFAVN 982
Score = 196 (74.1 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 90/340 (26%), Positives = 139/340 (40%)
Query: 28 YRLDYIPA-----HGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLT 81
YR+D IP HG P VSR+ + GL PG Y F ++ N +
Sbjct: 938 YRVDVIPVNLPGEHGQRLP----VSRNTFAEVT---GLSPGVTYHFKVFAVNQG-RESKP 989
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
TA T D PTNL + T + W+PP + G++L V L+ P+ +
Sbjct: 990 LTAQQATKLDAPTNLQFINETDTTVIVTWTPP-RARIVGYRLTV-GLTRGGQPK--QYNV 1045
Query: 142 NPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
P A Y L++L PG Y V L +V +++S T T +P ETT++
Sbjct: 1046 GPAASQYPLRNLQPGSEYAVSLVAVKGNQQSPRVTGVFTTLQPLGSIPHYNTEVTETTIV 1105
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W P+ P +K+ + P E+ V E GL PG Y ++
Sbjct: 1106 ITWTPA-PR---IGFKLGVRPSQGGEAPREVTSES-----GSIVVSGLTPGVEYVYTISV 1156
Query: 261 VSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1157 LRDGQERDAPIVKKVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITTTPT 1214
Query: 320 --RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G S + + + + C E L PG Y V V TV
Sbjct: 1215 NGQQGYSLEEVVHA--DQSSCTF-ENLSPGLEYNVSVYTV 1251
Score = 190 (71.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 85/352 (24%), Positives = 141/352 (40%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y
Sbjct: 1192 LTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTV 1251
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1252 KD---DKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1308
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1309 GIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1366
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P+SI T+ V P E V E P A L+
Sbjct: 1367 FTNVGPDTMRVTWAP--PSSIELTNLLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLL 1421
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG Y +SV +V E S P + +T P D + IT+NS V W P+ +
Sbjct: 1422 PGTEYLVSVSSVYEQHESIPLRGRQKTALDSPSGI--DFSDITANSFTVHWIAPR--ATI 1477
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y++ + G P + R P++ ++ L PG Y V + ++ K
Sbjct: 1478 TGYRIRHHPENMGGR--P-REDRVPPSRNSITLTNLNPGTEYVVSIVALNSK 1526
Score = 172 (65.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 87/350 (24%), Positives = 148/350 (42%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D ++ +GL PG++Y +
Sbjct: 1740 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGEEETAELQGLRPGSEYTVSVVA 1796
Query: 72 TNSTVHDW-LTWTASITTPPDPPTNLSVN--VRSGKTAQIFWSPPISGKYSGFKLKVISL 128
+ + L T S T P PTNL + TAQ W+ P + + +G++++V
Sbjct: 1797 LHDDMESQPLIGTQSTTIPA--PTNLKFTQVTPTSLTAQ--WTAP-NVQLTGYRVRVTP- 1850
Query: 129 SEKTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT-- 185
EKT P + I + + + L Y+V ++++ D+ S TT N
Sbjct: 1851 KEKTGPMKEINLAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSP 1908
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
P + V ETT+ + W+ T ++V P + + + P
Sbjct: 1909 PRRARVTDATETTITISWRTK--TETITGFQVDAIPANGQTPIQRTIR----PDVRSYTI 1962
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
GL PG Y I + T++++ S+P T P + + + T NSL V W+PP+
Sbjct: 1963 TGLQPGTDYKIHLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR- 2019
Query: 306 FSEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
+ Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 2020 -ARITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIQV 2065
Score = 170 (64.9 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 75/308 (24%), Positives = 125/308 (40%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 1328 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNVGPDTMRVTWAPPSSI 1385
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ + ++ + + + + + A L +L PG Y V + SVY+ ES+
Sbjct: 1386 ELTNLLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRG 1444
Query: 177 RNFTTKPNTPGKFIVWFRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
R T + G + F + T + V W P + T Y++ PE++ +E
Sbjct: 1445 RQKTALDSPSG---IDFSDITANSFTVHWIA--PRATITGYRIR----HHPENMGGRPRE 1495
Query: 235 GE-PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
PP L PG Y +S+ ++ E S P Q T+ P + + T
Sbjct: 1496 DRVPPSRNSITLTNLNPGTEYVVSIVALNSKEESLPLVGQQSTVSDVPRDL--EVIAATP 1553
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQV 352
SL + W+ P + Y+++ G SS P+ + ++ + GL+PG Y +
Sbjct: 1554 TSLLISWDAPAVTVRY--YRITYG--ETGGSS-PVQEFTVPGSKSTATISGLKPGVDYTI 1608
Query: 353 LVKTVSGK 360
V V+G+
Sbjct: 1609 TVYAVTGR 1616
Score = 162 (62.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 63/258 (24%), Positives = 103/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1844 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1901
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + +TP I T P
Sbjct: 1902 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQTP---IQRTIRPDV 1957
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1958 RSYTITGLQPGTDYKIHLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 2016
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 2017 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIQVIALKNN 2071
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 2072 QKSEPLIGRKKTDELPQL 2089
Score = 152 (58.6 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 68/255 (26%), Positives = 104/255 (40%)
Query: 105 TAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164
T I W+P GFKL V PR + +E+ + LTPG Y +
Sbjct: 1103 TIVITWTP---APRIGFKLGVRPSQGGEAPREVT-SES--GSIVVSGLTPGVEYVYTISV 1156
Query: 165 VYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPASIYTHYKVSIDPPD 223
+ D +E A + T + P + +T +L V W+ S I T Y+++ P +
Sbjct: 1157 LRDGQERDAPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPDI-TGYRITTTPTN 1215
Query: 224 APESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS 283
+ Y +E + F+ L PG YN+SV TV +D+ S P + IP P
Sbjct: 1216 GQQG--YSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPISDTI--IPEVPQL 1271
Query: 284 FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSR-DEPTQCDMSE 342
IT +S+ + W P S Y++++ G PI + D
Sbjct: 1272 TDLSFVDITDSSIGLRWTPLNS-STIIGYRITVVAAGEGI---PIFEDFVDSSVGYYTVT 1327
Query: 343 GLEPGRTYQVLVKTV 357
GLEPG Y + V T+
Sbjct: 1328 GLEPGIDYDISVITL 1342
Score = 145 (56.1 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 79/344 (22%), Positives = 125/344 (36%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P T V D E + EGL P +Y +Y N
Sbjct: 1658 SSPVTGYRVTTAPKNGPGPSKTKTVG---PDQTEMTIEGLQPTVEYVVSVYAQNQNGESQ 1714
Query: 80 -LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIG 138
L TA T D P L+ + +I W P G+ S +++ S E +
Sbjct: 1715 PLVQTA--VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFP 1770
Query: 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETT 198
+ L+ L PG Y V + +++D ES TT P P T+
Sbjct: 1771 APDGEEETAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTTIP-APTNLKFTQVTPTS 1829
Query: 199 LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
L W + P T Y+V + P + + + P + GL+ Y +SV
Sbjct: 1830 LTAQW--TAPNVQLTGYRVRVTPKEKTGPMKEINLA---PDSSSVVVSGLMVATKYEVSV 1884
Query: 259 QTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+ + S P T+ P R T T ++ + W +QV
Sbjct: 1885 YALKDTLTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQV 1938
Query: 315 SINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P TPI ++ + GL+PG Y++ + T++
Sbjct: 1939 DAI---PANGQTPIQRTIRPDVRSYTITGLQPGTDYKIHLYTLN 1979
Score = 134 (52.2 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 82/320 (25%), Positives = 129/320 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGK--TAQIFWSPPIS 115
L G +Y Y Y + +W + T PD P + + + + I WS P S
Sbjct: 581 LQGVRYQCYCY--GRGIGEWAC--QPLQTYPDTSGPVQVIITETPSQPNSHPIQWSAPES 636
Query: 116 GKYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSV--YDSKESV 172
S + L+ + +P R T Y++K L PG Y+ QL SV Y +E
Sbjct: 637 SHISKYILRW--KPKNSPDRWKEATIPGHLNSYTIKGLRPGVVYEGQLISVQHYGQREVT 694
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNETTLL---VLWQPSYPASIYTHYKVS-IDPPDAPES- 227
+ +FTT +P ETT L V S + + VS + D
Sbjct: 695 RF---DFTTTSTSPAVTSNTVTGETTPLSPVVATSESVTEITASSFVVSWVSASDTVSGF 751
Query: 228 -VLY-VEKEGEPPG----PAQAA---FKGLVPGRAYNISVQTVSED-EISTPTTAQYRTI 277
V Y + +EG+ P P+ A L+PGR Y ++V +SE+ E + + T
Sbjct: 752 RVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYTVNVYEISEEGEQNLILSTSQTTA 811
Query: 278 PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQ 337
P P T D+ TS +R W P+ + Y++ + G SST + +
Sbjct: 812 PDAPPDPTVDQVDDTSIVVR--WSRPR--APITGYRIVYSPSVEG-SSTELNLP-ETANS 865
Query: 338 CDMSEGLEPGRTYQVLVKTV 357
+S+ L+PG Y + + V
Sbjct: 866 VTLSD-LQPGVQYNITIYAV 884
Score = 125 (49.1 bits), Expect = 0.00055, P = 0.00055
Identities = 72/332 (21%), Positives = 121/332 (36%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY-YTNSTVHDWLTWTASI 86
YR+ Y G P V K S PG Y +Y T + SI
Sbjct: 1570 YRITYGETGGSSPVQEFTVPGS-KSTATISGLKPGVDYTITVYAVTGRGDSPASSKPVSI 1628
Query: 87 T--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P+ + V + + W P S +G+++ + P + T P
Sbjct: 1629 NYRTEIDKPSQMQVTDVQDNSISVRWLPS-SSPVTGYRVTTAPKNGPGPSKTK--TVGPD 1685
Query: 145 -AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+++ L P Y V +++ + ES + T + P + ++ + W
Sbjct: 1686 QTEMTIEGLQPTVEYVVSVYAQNQNGESQPLV-QTAVTNIDRPKGLAFTDVDVDSIKIAW 1744
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
+ P + Y+V+ P+ L+ +GE A +GL PG Y +SV + +
Sbjct: 1745 ES--PQGQVSRYRVTYSSPEDGIHELFPAPDGEEE---TAELQGLRPGSEYTVSVVALHD 1799
Query: 264 DEISTPTTA-QYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
D S P Q TIP P + + + +T SL W P + Y+V + +
Sbjct: 1800 DMESQPLIGTQSTTIPA-PTNLKFTQ--VTPTSLTAQWTAPN--VQLTGYRVRVTPKEKT 1854
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
I + D + + GL Y+V V
Sbjct: 1855 GPMKEINLAPDSSSV--VVSGLMVATKYEVSV 1884
Score = 46 (21.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKT 356
+ W P F E +Y +S + G P+ + R T + GL G TY ++V+
Sbjct: 2213 ISWTP---FQESSEYIISCHP--VGIDEEPL-QFRVPGTSASATLTGLTRGATYNIIVEA 2266
Query: 357 V 357
V
Sbjct: 2267 V 2267
>UNIPROTKB|G5E5A9 [details] [associations]
symbol:FN1 "Fibronectin" species:9913 "Bos taurus"
[GO:0042060 "wound healing" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0018149
"peptide cross-linking" evidence=IEA] [GO:0016504 "peptidase
activator activity" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IEA] [GO:0007161 "calcium-independent
cell-matrix adhesion" evidence=IEA] [GO:0007044 "cell-substrate
junction assembly" evidence=IEA] [GO:0005793 "endoplasmic
reticulum-Golgi intermediate compartment" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005577 "fibrinogen complex"
evidence=IEA] InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039
Pfam:PF00041 PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091
SMART:SM00058 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0005577 GO:GO:0016504
GO:GO:0042060 GO:GO:0034446 GO:GO:0005604 GO:GO:0005793
GO:GO:0018149 InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GeneTree:ENSGT00700000104067 GO:GO:0007044
OMA:IPGHLNS GO:GO:0007161 EMBL:DAAA02005870
Ensembl:ENSBTAT00000010925 Uniprot:G5E5A9
Length = 2478
Score = 203 (76.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 85/349 (24%), Positives = 150/349 (42%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 744 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYTVNVYEISEEGEQN 801
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 802 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-RAPITGYRI-VYSPSVEGSSTELNL 859
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT----PGKFIVWFR 194
E + +L DL PG Y + +++V +++ES + + T P + P + + +
Sbjct: 860 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVE 918
Query: 195 -NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
+ + ++W P P S T Y+V + P + P + G+ ++ F GL P
Sbjct: 919 VTDVKITIMWTP--PESPVTGYRVDVIPVNLPG------EHGQRLPVSRNTFAEVTGLSP 970
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y+ V V++ S P TAQ T P + + + T ++ V W PP+ +
Sbjct: 971 GVTYHFKVFAVNQGRESKPLTAQQATKLDAPTNLQF--INETDTTVIVTWTPPR--ARIV 1026
Query: 311 KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
Y++++ + R G +Q + L+PG Y V + V G
Sbjct: 1027 GYRLTVGLTRGGQPKQ--YNVGPAASQYPL-RNLQPGSEYAVSLVAVKG 1072
Score = 202 (76.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 84/305 (27%), Positives = 131/305 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T+ V T T TTP P T+ SV + + + W S SG
Sbjct: 694 TRFDFTTTSTSPAVTS-NTVTGE-TTPLSPVVATSESVTEITASSFVVSWVSA-SDTVSG 750
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 751 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYTVNVYEISEEGEQNLILSTSQT 809
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 810 TAPDAPPDPTVDQVDDTSIVVRW--SRPRAPITGYRIVYSP-----SVEGSSTELNLPET 862
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSN 294
A + L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 863 ANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVEVTDV 922
Query: 295 SLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353
+ ++W PP+ S Y+V I V PG + SR+ T +++ GL PG TY
Sbjct: 923 KITIMWTPPE--SPVTGYRVDVIPVNLPGEHGQRLPVSRN--TFAEVT-GLSPGVTYHFK 977
Query: 354 VKTVS 358
V V+
Sbjct: 978 VFAVN 982
Score = 196 (74.1 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 90/340 (26%), Positives = 139/340 (40%)
Query: 28 YRLDYIPA-----HGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLT 81
YR+D IP HG P VSR+ + GL PG Y F ++ N +
Sbjct: 938 YRVDVIPVNLPGEHGQRLP----VSRNTFAEVT---GLSPGVTYHFKVFAVNQG-RESKP 989
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
TA T D PTNL + T + W+PP + G++L V L+ P+ +
Sbjct: 990 LTAQQATKLDAPTNLQFINETDTTVIVTWTPP-RARIVGYRLTV-GLTRGGQPK--QYNV 1045
Query: 142 NPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
P A Y L++L PG Y V L +V +++S T T +P ETT++
Sbjct: 1046 GPAASQYPLRNLQPGSEYAVSLVAVKGNQQSPRVTGVFTTLQPLGSIPHYNTEVTETTIV 1105
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W P+ P +K+ + P E+ V E GL PG Y ++
Sbjct: 1106 ITWTPA-PR---IGFKLGVRPSQGGEAPREVTSES-----GSIVVSGLTPGVEYVYTISV 1156
Query: 261 VSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1157 LRDGQERDAPIVKKVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITTTPT 1214
Query: 320 --RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G S + + + + C E L PG Y V V TV
Sbjct: 1215 NGQQGYSLEEVVHA--DQSSCTF-ENLSPGLEYNVSVYTV 1251
Score = 190 (71.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 85/352 (24%), Positives = 141/352 (40%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y
Sbjct: 1192 LTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTV 1251
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1252 KD---DKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1308
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1309 GIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1366
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P+SI T+ V P E V E P A L+
Sbjct: 1367 FTNVGPDTMRVTWAP--PSSIELTNLLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLL 1421
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG Y +SV +V E S P + +T P D + IT+NS V W P+ +
Sbjct: 1422 PGTEYLVSVSSVYEQHESIPLRGRQKTALDSPSGI--DFSDITANSFTVHWIAPR--ATI 1477
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y++ + G P + R P++ ++ L PG Y V + ++ K
Sbjct: 1478 TGYRIRHHPENMGGR--P-REDRVPPSRNSITLTNLNPGTEYVVSIVALNSK 1526
Score = 170 (64.9 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 75/308 (24%), Positives = 125/308 (40%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 1328 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNVGPDTMRVTWAPPSSI 1385
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ + ++ + + + + + A L +L PG Y V + SVY+ ES+
Sbjct: 1386 ELTNLLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRG 1444
Query: 177 RNFTTKPNTPGKFIVWFRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
R T + G + F + T + V W P + T Y++ PE++ +E
Sbjct: 1445 RQKTALDSPSG---IDFSDITANSFTVHWIA--PRATITGYRIR----HHPENMGGRPRE 1495
Query: 235 GE-PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
PP L PG Y +S+ ++ E S P Q T+ P + + T
Sbjct: 1496 DRVPPSRNSITLTNLNPGTEYVVSIVALNSKEESLPLVGQQSTVSDVPRDL--EVIAATP 1553
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQV 352
SL + W+ P + Y+++ G SS P+ + ++ + GL+PG Y +
Sbjct: 1554 TSLLISWDAPAVTVRY--YRITYG--ETGGSS-PVQEFTVPGSKSTATISGLKPGVDYTI 1608
Query: 353 LVKTVSGK 360
V V+G+
Sbjct: 1609 TVYAVTGR 1616
Score = 167 (63.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 86/350 (24%), Positives = 147/350 (42%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D ++ +GL PG++Y +
Sbjct: 1740 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGEEETAELQGLRPGSEYTVSVVA 1796
Query: 72 TNSTVHDW-LTWTASITTPPDPPTNLSVN--VRSGKTAQIFWSPPISGKYSGFKLKVISL 128
+ + L T S P PTNL + TAQ W+ P + + +G++++V
Sbjct: 1797 LHDDMESQPLIGTQSTAIPA--PTNLKFTQVTPTSLTAQ--WTAP-NVQLTGYRVRVTP- 1850
Query: 129 SEKTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT-- 185
EKT P + I + + + L Y+V ++++ D+ S TT N
Sbjct: 1851 KEKTGPMKEINLAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSP 1908
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
P + V ETT+ + W+ T ++V P + + + P
Sbjct: 1909 PRRARVTDATETTITISWRTK--TETITGFQVDAIPANGQTPIQRTIR----PDVRSYTI 1962
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
GL PG Y I + T++++ S+P T P + + + T NSL V W+PP+
Sbjct: 1963 TGLQPGTDYKIHLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR- 2019
Query: 306 FSEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
+ Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 2020 -ARITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIQV 2065
Score = 162 (62.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 63/258 (24%), Positives = 103/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1844 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1901
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + +TP I T P
Sbjct: 1902 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQTP---IQRTIRPDV 1957
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1958 RSYTITGLQPGTDYKIHLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 2016
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 2017 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIQVIALKNN 2071
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 2072 QKSEPLIGRKKTDELPQL 2089
Score = 152 (58.6 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 68/255 (26%), Positives = 104/255 (40%)
Query: 105 TAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164
T I W+P GFKL V PR + +E+ + LTPG Y +
Sbjct: 1103 TIVITWTP---APRIGFKLGVRPSQGGEAPREVT-SES--GSIVVSGLTPGVEYVYTISV 1156
Query: 165 VYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPASIYTHYKVSIDPPD 223
+ D +E A + T + P + +T +L V W+ S I T Y+++ P +
Sbjct: 1157 LRDGQERDAPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPDI-TGYRITTTPTN 1215
Query: 224 APESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS 283
+ Y +E + F+ L PG YN+SV TV +D+ S P + IP P
Sbjct: 1216 GQQG--YSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPISDTI--IPEVPQL 1271
Query: 284 FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSR-DEPTQCDMSE 342
IT +S+ + W P S Y++++ G PI + D
Sbjct: 1272 TDLSFVDITDSSIGLRWTPLNS-STIIGYRITVVAAGEGI---PIFEDFVDSSVGYYTVT 1327
Query: 343 GLEPGRTYQVLVKTV 357
GLEPG Y + V T+
Sbjct: 1328 GLEPGIDYDISVITL 1342
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 78/344 (22%), Positives = 124/344 (36%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P T V D E + EGL P +Y +Y N
Sbjct: 1658 SSPVTGYRVTTAPKNGPGPSKTKTVG---PDQTEMTIEGLQPTVEYVVSVYAQNQNGESQ 1714
Query: 80 -LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIG 138
L TA T D P L+ + +I W P G+ S +++ S E +
Sbjct: 1715 PLVQTA--VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFP 1770
Query: 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETT 198
+ L+ L PG Y V + +++D ES T P P T+
Sbjct: 1771 APDGEEETAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTAIP-APTNLKFTQVTPTS 1829
Query: 199 LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
L W + P T Y+V + P + + + P + GL+ Y +SV
Sbjct: 1830 LTAQW--TAPNVQLTGYRVRVTPKEKTGPMKEINLA---PDSSSVVVSGLMVATKYEVSV 1884
Query: 259 QTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+ + S P T+ P R T T ++ + W +QV
Sbjct: 1885 YALKDTLTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQV 1938
Query: 315 SINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P TPI ++ + GL+PG Y++ + T++
Sbjct: 1939 DAI---PANGQTPIQRTIRPDVRSYTITGLQPGTDYKIHLYTLN 1979
Score = 133 (51.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 82/320 (25%), Positives = 129/320 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGK--TAQIFWSPPIS 115
L G +Y Y Y + +W + T PD P + + + + I WS P S
Sbjct: 581 LQGVRYQCYCY--GRGIGEWAC--QPLQTYPDTSGPVQVIITETPSQPNSHPIQWSAPES 636
Query: 116 GKYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSV--YDSKESV 172
S + L+ + +P R T Y++K L PG Y+ QL SV Y +E
Sbjct: 637 SHISKYILRW--KPKNSPNRWKEATIPGHLNSYTIKGLRPGVVYEGQLISVQHYGQREVT 694
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNETTLL---VLWQPSYPASIYTHYKVS-IDPPDAPES- 227
+ +FTT +P ETT L V S + + VS + D
Sbjct: 695 RF---DFTTTSTSPAVTSNTVTGETTPLSPVVATSESVTEITASSFVVSWVSASDTVSGF 751
Query: 228 -VLY-VEKEGEPPG----PAQAA---FKGLVPGRAYNISVQTVSED-EISTPTTAQYRTI 277
V Y + +EG+ P P+ A L+PGR Y ++V +SE+ E + + T
Sbjct: 752 RVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYTVNVYEISEEGEQNLILSTSQTTA 811
Query: 278 PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQ 337
P P T D+ TS +R W P+ + Y++ + G SST + +
Sbjct: 812 PDAPPDPTVDQVDDTSIVVR--WSRPR--APITGYRIVYSPSVEG-SSTELNLP-ETANS 865
Query: 338 CDMSEGLEPGRTYQVLVKTV 357
+S+ L+PG Y + + V
Sbjct: 866 VTLSD-LQPGVQYNITIYAV 884
Score = 46 (21.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKT 356
+ W P F E +Y +S + G P+ + R T + GL G TY ++V+
Sbjct: 2213 ISWTP---FQESSEYIISCHP--VGIDEEPL-QFRVPGTSASATLTGLTRGATYNIIVEA 2266
Query: 357 V 357
V
Sbjct: 2267 V 2267
>UNIPROTKB|J9P8M2 [details] [associations]
symbol:FN1 "Fibronectin" species:9615 "Canis lupus
familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041
PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058
SMART:SM00060 GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR013806 SUPFAM:SSF57440
Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059
PROSITE:PS00023 PROSITE:PS51092 GeneTree:ENSGT00700000104067
EMBL:AAEX03018114 Ensembl:ENSCAFT00000043476 Uniprot:J9P8M2
Length = 2256
Score = 202 (76.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 84/347 (24%), Positives = 148/347 (42%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 729 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGEQS 786
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 787 LILSTSQTTAPDAPPDPAVDRVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 844
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT----PGKFIVWFR 194
E + +L DL PG Y + +++V +++ES + + T P + P + + +
Sbjct: 845 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVE 903
Query: 195 -NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ-AAFKGLVPGR 252
+ + ++W P P S T Y+V + P + P + P A GL PG
Sbjct: 904 VTDVKITIMWTP--PESTVTGYRVDVIPVNLPGE----HGQRLPINRNTFAEVTGLSPGV 957
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y+ V V++ S P TA+ T P + + A+ T +++ V+W PP+ + Y
Sbjct: 958 TYHFKVFAVNQGRESRPLTAEQTTKLDAPTNLRF--ANETDSTVLVIWTPPR--ARIAGY 1013
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++++ R G +Q + L+P Y V + V G
Sbjct: 1014 RLTVGPTRGGHPKQ--YNVGPSASQYPL-RNLQPATEYTVSLVAVKG 1057
Score = 197 (74.4 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 87/343 (25%), Positives = 141/343 (41%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW----LTWT 83
++L P+ G P V+ D +I S PG +Y YT S + D
Sbjct: 1101 FKLGVRPSQGGEAPRE--VTSD-SGSIVVSGLTPGVEY----VYTISVLRDGQERDTPIV 1153
Query: 84 ASITTPPDPPTNLSV--NVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
+ TP PPTNL + N +G + W + +G+++ + + +
Sbjct: 1154 KKVVTPLSPPTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVH 1212
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN--ETTL 199
+ + ++L+PG Y V +++V D KESV + T P P + F N T+
Sbjct: 1213 ADQSSCTFENLSPGLEYNVSVYTVKDDKESVPISD---TIIPAVPPPTDLRFTNIGPDTM 1269
Query: 200 LVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
V W P P SI T++ V P E V + P L+PG Y +SV
Sbjct: 1270 RVTWAP--PPSIELTNFLVRYSPVKNEEDVAELSIS---PSDNVVVLTNLLPGTEYLVSV 1324
Query: 259 QTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINV 318
+V E STP + +T P D + IT+NS V W P+ + Y++
Sbjct: 1325 SSVYEQHESTPLRGRQKTGLDSPSGI--DFSDITANSFTVHWIAPR--ATITGYRIR--- 1377
Query: 319 RRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
P +S + R P++ ++ L PG Y V + ++G+
Sbjct: 1378 HHPEHTSGRPREDRVPPSRNSITLTNLNPGTEYVVSIIALNGR 1420
Score = 196 (74.1 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 83/305 (27%), Positives = 131/305 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T+ V T T TTP P T+ SV + + + W S SG
Sbjct: 679 TRFDFTTTSTSPPVTS-NTVTGE-TTPLSPVVATSESVTEITASSFVVSWVSA-SDTVSG 735
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 736 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGEQSLILSTSQT 794
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 795 TAPDAPPDPAVDRVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPET 847
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSN 294
A + L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 848 ANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVEVTDV 907
Query: 295 SLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353
+ ++W PP+ S Y+V I V PG + +R+ T +++ GL PG TY
Sbjct: 908 KITIMWTPPE--STVTGYRVDVIPVNLPGEHGQRLPINRN--TFAEVT-GLSPGVTYHFK 962
Query: 354 VKTVS 358
V V+
Sbjct: 963 VFAVN 967
Score = 181 (68.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 85/340 (25%), Positives = 143/340 (42%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P P+ T + D E + EGL P +Y +Y N
Sbjct: 1552 SSPVTGYRVTTTPKNG-PGPSKTKTAGP--DQTEMTIEGLQPTVEYVVSVYAQNRNGESQ 1608
Query: 80 LTWTASITTPPDPPTNLSVNVR-SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPP-RII 137
++TT P P V + TAQ W+ P + + +G++++V EKT P + I
Sbjct: 1609 PLVQTAVTTIPAPADLKFTQVTPTSLTAQ--WTAP-NVQLTGYRVRVTP-KEKTGPMKEI 1664
Query: 138 GFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PGKFIVWFRN 195
+ + + L Y+V ++++ D+ S TT N P + V
Sbjct: 1665 NLAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPRRARVTDAT 1722
Query: 196 ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
ETT+ + W+ T ++V P + + + P GL PG Y
Sbjct: 1723 ETTITISWRTK--TETITGFQVDAIPANGQNPIQRTIR----PDVRSYTITGLQPGTDYK 1776
Query: 256 ISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
I + T++++ S+P T P + + + T NSL V W+PP+ + Y
Sbjct: 1777 IYLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR--ARITGY--I 1830
Query: 316 INVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 1831 IKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIQV 1869
Score = 175 (66.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 76/351 (21%), Positives = 140/351 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y T
Sbjct: 1177 LTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVY-T 1235
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
+ + + +I PPT+L T ++ W+PP S + + F ++ + +
Sbjct: 1236 VKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPPSIELTNFLVRYSPVKNEE 1295
Query: 133 PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW 192
+ + + L +L PG Y V + SVY+ ES R T + G +
Sbjct: 1296 DVAELSISPSDNV-VVLTNLLPGTEYLVSVSSVYEQHESTPLRGRQKTGLDSPSG---ID 1351
Query: 193 FRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVP 250
F + T + V W P + T Y++ P ++ PP L P
Sbjct: 1352 FSDITANSFTVHWIA--PRATITGYRIRHHPEHTSGRP---REDRVPPSRNSITLTNLNP 1406
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y +S+ ++ E S P Q T+ P + + T SL + W+ P +
Sbjct: 1407 GTEYVVSIIALNGREESPPLIGQQSTVSDVPRDL--EVIAATPTSLLISWDAPAVTVRY- 1463
Query: 311 KYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y+++ G +S P+ + ++ + GL+PG Y + V V+G+
Sbjct: 1464 -YRITYG--ETGGNS-PVQEFTVPGSKSTATISGLKPGADYTITVYAVTGR 1510
Score = 170 (64.9 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 74/328 (22%), Positives = 132/328 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1648 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1705
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + + P I T P
Sbjct: 1706 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQNP---IQRTIRPDV 1761
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1762 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 1820
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 1821 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIQVIALKNN 1875
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW----EPPKGFSE-FDKYQVSINVR 319
+ S P + +T+ P F + T N +++ +P G F+++
Sbjct: 1876 QKSEPLIGRKKTVQKTP--FITNPGYDTGNGIQLPGTSGQQPSVGQQMIFEEH--GFRRT 1931
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLEPG 347
P ++TP+ + R P +++E ++ G
Sbjct: 1932 TPPTTATPV-RHRPRPYPPNVNEEIQVG 1958
Score = 153 (58.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 69/268 (25%), Positives = 107/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1078 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1128
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E + T + P + +T +L V W+ S
Sbjct: 1129 LTPGVEYVYTISVLRDGQERDTPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1188
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + Y +E + F+ L PG YN+SV TV +D+ S P
Sbjct: 1189 I-TGYRITTTPTNGQQG--YSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPI 1245
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P +I +++RV W PP E + V + P + + +
Sbjct: 1246 SDTI--IPAVPPPTDLRFTNIGPDTMRVTWAPPPSI-ELTNFLVRYS---PVKNEEDVAE 1299
Query: 331 SRDEPTQ-CDMSEGLEPGRTYQVLVKTV 357
P+ + L PG Y V V +V
Sbjct: 1300 LSISPSDNVVVLTNLLPGTEYLVSVSSV 1327
>UNIPROTKB|F1LST1 [details] [associations]
symbol:Fn1 "Fibronectin" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060
RGD:2624 GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR013806 SUPFAM:SSF57440
Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059
PROSITE:PS00023 PROSITE:PS51092 GeneTree:ENSGT00700000104067
IPI:IPI00231984 Ensembl:ENSRNOT00000057585 ArrayExpress:F1LST1
Uniprot:F1LST1
Length = 2361
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 90/339 (26%), Positives = 145/339 (42%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSE--GL-PGTKYDFYLYYTNSTVHDWLTWTA 84
YR+D +P + P + N F+E GL PG Y F ++ + + TA
Sbjct: 936 YRVDVLPVN---LPGEHGQRLPVNRNT-FAEVTGLSPGVTYLFKVFAVHQG-RESKPLTA 990
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
TT D PTNL + +T + W+PP + +G++L V L+ P+ + P
Sbjct: 991 QQTTKLDAPTNLQFVNETDRTVLVTWTPP-RARIAGYRLTV-GLTRGGQPK--QYNVGPM 1046
Query: 145 AG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE---TTLL 200
A Y L++L PG Y V L +V +++S T FTT P + I + E TT++
Sbjct: 1047 ASKYPLRNLQPGSEYTVTLMAVKGNQQSPKATGV-FTTLQ--PLRSIPPYNTEVTETTIV 1103
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W P+ P +K+ + P E+ V + GL PG Y ++Q
Sbjct: 1104 ITWTPA-PR---IGFKLGVRPSQGGEAPREVTSDS-----GSIVVSGLTPGVEYTYTIQV 1154
Query: 261 VSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1155 LRDGQERDAPIVNRVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITTTPT 1212
Query: 320 RPGASSTPITKS-RDEPTQCDMSEGLEPGRTYQVLVKTV 357
G T + + + + C E L PG Y V V TV
Sbjct: 1213 N-GQQGTALEEVVHADQSSCTF-ENLNPGLEYNVSVYTV 1249
Score = 197 (74.4 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 88/347 (25%), Positives = 143/347 (41%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 742 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGKQS 799
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 800 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 857
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT---PGKFIVWFRN 195
E + +L DL PG Y + +++V +++ES + + T P + P + F
Sbjct: 858 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDDVPAPKDLQFVE 916
Query: 196 ETTLLV--LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ-AAFKGLVPGR 252
T + V +W P P S T Y+V + P + P + P A GL PG
Sbjct: 917 VTDVKVTIMWTP--PNSAVTGYRVDVLPVNLPGE----HGQRLPVNRNTFAEVTGLSPGV 970
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y V V + S P TAQ T P + + + T ++ V W PP+ + Y
Sbjct: 971 TYLFKVFAVHQGRESKPLTAQQTTKLDAPTNLQF--VNETDRTVLVTWTPPR--ARIAGY 1026
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++++ + R G P + L+PG Y V + V G
Sbjct: 1027 RLTVGLTRGGQ---PKQYNVGPMASKYPLRNLQPGSEYTVTLMAVKG 1070
Score = 183 (69.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 76/315 (24%), Positives = 134/315 (42%)
Query: 51 KDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFW 110
+++I + PGT+Y + N + +T D P +L V + + I W
Sbjct: 1409 RNSITLTNLNPGTEYIVTIIAVNGR-EESPPLIGQQSTVSDVPRDLEVIASTPTSLLISW 1467
Query: 111 SPP-ISGKYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSVY-- 166
PP +S +Y +++ +P + FT + ++ ++ PG Y + L++V
Sbjct: 1468 EPPAVSVRY--YRITYGETGGNSP--VQEFTVPGSKSTATINNIKPGADYTITLYAVTGR 1523
Query: 167 -DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
DS S S N+ T+ + P + V + ++ V W PS S T Y+V+ AP
Sbjct: 1524 GDSPASSKPVSINYQTEIDKPSQMQVTDVQDNSISVRWLPS--TSPVTGYRVTT----AP 1577
Query: 226 ESVLYVEK-EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSF 284
++ L K + P + +GL P Y +SV + + S P T RP
Sbjct: 1578 KNGLGPTKSQTVSPDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGL 1637
Query: 285 TYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGL 344
+ + +S+++ WE P+G + +Y+V+ + G DE T ++ GL
Sbjct: 1638 AFTDVDV--DSIKIAWESPQG--QVSRYRVTYSSPEDGIHELFPAPDGDEDT-AEL-HGL 1691
Query: 345 EPGRTYQVLVKTVSG 359
PG Y V V + G
Sbjct: 1692 RPGSEYTVSVVALHG 1706
Score = 180 (68.4 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 75/296 (25%), Positives = 126/296 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTW-TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
T++DF + + +T TA + P T+ SV + + + W S SGF
Sbjct: 693 TRFDFTTSASTPVTSNTVTGETAPFS--PVVATSESVTEITASSFVVSWVSA-SDTVSGF 749
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+++ E P+ + + ++ DL PG Y V ++ + + + S + TT
Sbjct: 750 RVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGKQSLILSTSQTT 808
Query: 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241
P+ P V ++T+++V W S P + T Y++ P SV E P A
Sbjct: 809 APDAPPDPTVDQVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPETA 861
Query: 242 QAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSNS 295
+ L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 862 NSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDDVPAPKDLQFVEVTDVK 921
Query: 296 LRVVWEPPKGFSEFDKYQVSI-NVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTY 350
+ ++W PP S Y+V + V PG + +R+ T +++ GL PG TY
Sbjct: 922 VTIMWTPPN--SAVTGYRVDVLPVNLPGEHGQRLPVNRN--TFAEVT-GLSPGVTY 972
Score = 168 (64.2 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 75/349 (21%), Positives = 134/349 (38%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G V + + F PG +Y+ +Y
Sbjct: 1190 LTVSWERSTTPDITGYRITTTPTNGQQGTALEEVVHADQSSCTFENLNPGLEYNVSVYTV 1249
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
I P PPT+L T ++ W+PP S + + ++ + +
Sbjct: 1250 KDDKESAPISDTVIPAVP-PPTDLRFTNIGPDTMRVTWAPPPSIELTNLLVRYSPVKNEE 1308
Query: 133 PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW 192
+ + + A L +L PG Y V + SVY+ ES+ R T ++P F
Sbjct: 1309 DVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRGRQ-KTGLDSPTGFDSS 1366
Query: 193 FRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGR 252
+ V W P + T Y + A S ++ PP L PG
Sbjct: 1367 DVTANSFTVHWVA--PRAPITGYIIR---HHAEHSAGRPRQDRVPPSRNSITLTNLNPGT 1421
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y +++ V+ E S P Q T+ P + + T SL + WEPP + Y
Sbjct: 1422 EYIVTIIAVNGREESPPLIGQQSTVSDVPRDL--EVIASTPTSLLISWEPPAVSVRY--Y 1477
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
+++ G +S P+ + ++ + ++PG Y + + V+G+
Sbjct: 1478 RITYG--ETGGNS-PVQEFTVPGSKSTATINNIKPGADYTITLYAVTGR 1523
Score = 165 (63.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 85/347 (24%), Positives = 142/347 (40%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D ++ GL PG++Y +
Sbjct: 1647 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGDEDTAELHGLRPGSEYTVSVVA 1703
Query: 72 TNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK 131
+ + T P PTNL S T W+ P S K +G++++V EK
Sbjct: 1704 LHGGMESQPLIGVQSTAIP-APTNLKFTQVSPTTLTAQWTAP-SVKLTGYRVRVTP-KEK 1760
Query: 132 TPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PGK 188
T P + I + + + + L Y+V ++++ D+ S TT N P +
Sbjct: 1761 TGPMKEINLSPDSTS-VIVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPRR 1818
Query: 189 FIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL 248
V ETT+ + W+ T ++V P + V + P GL
Sbjct: 1819 ARVTDATETTITISWRTK--TETITGFQVDAIPANGQTPV----QRTISPDVRSYTITGL 1872
Query: 249 VPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSE 308
PG Y I + T++++ S+P T P + + + T NSL V W+ P+ +
Sbjct: 1873 QPGTDYKIHLYTLNDNARSSPVVIDASTAIDAPSNLRF--LTTTPNSLLVSWQAPR--AR 1928
Query: 309 FDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 1929 ITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIYV 1972
Score = 163 (62.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 74/328 (22%), Positives = 132/328 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P +S D ++ S + TKY+ +Y T+ +T
Sbjct: 1751 YRVRVTPKEKTGPMKEINLSPD-STSVIVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1808
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + +TP + T +P
Sbjct: 1809 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQTP---VQRTISPDV 1864
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1865 RSYTITGLQPGTDYKIHLYTLNDNARSSPVVI-DASTAIDAPSNLRFLTTTPNSLLVSWQ 1923
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 1924 A--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIYVIALKNN 1978
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW----EPPKGFSE-FDKYQVSINVR 319
+ S P + +T+ P F + T N +++ +P G F+++
Sbjct: 1979 QKSEPLIGRKKTVQKTP--FVTNPGYDTENGIQLPGTSHQQPSVGQQMIFEEH--GFRRT 2034
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLEPG 347
P ++TP+ + R P ++ E ++ G
Sbjct: 2035 TPPTAATPV-RLRPRPYLPNVDEEVQIG 2061
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 69/268 (25%), Positives = 105/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1091 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1141
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E A T + P + +T +L V W+ S
Sbjct: 1142 LTPGVEYTYTIQVLRDGQERDAPIVNRVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1201
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + +E + F+ L PG YN+SV TV +D+ S P
Sbjct: 1202 I-TGYRITTTPTNGQQGTAL--EEVVHADQSSCTFENLNPGLEYNVSVYTVKDDKESAPI 1258
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P +I +++RV W PP E V + P + + +
Sbjct: 1259 SDT--VIPAVPPPTDLRFTNIGPDTMRVTWAPPPSI-ELTNLLVRYS---PVKNEEDVAE 1312
Query: 331 SRDEPTQ-CDMSEGLEPGRTYQVLVKTV 357
P+ + L PG Y V V +V
Sbjct: 1313 LSISPSDNAVVLTNLLPGTEYLVSVSSV 1340
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 75/338 (22%), Positives = 121/338 (35%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW-LTWTA 84
YR+ P +G P + VS D E + EGL P +Y +Y N L TA
Sbjct: 1571 YRVTTAPKNGLGPTKSQTVS---PDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTA 1627
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P L+ + +I W P G+ S +++ S E + +
Sbjct: 1628 --VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFPAPDGDE 1683
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
L L PG Y V + +++ ES T P P + TTL W
Sbjct: 1684 DTAELHGLRPGSEYTVSVVALHGGMESQPLIGVQSTAIP-APTNLKFTQVSPTTLTAQW- 1741
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
+ P+ T Y+V + P + + + P GL+ Y +SV + +
Sbjct: 1742 -TAPSVKLTGYRVRVTPKEKTGPMKEINLS---PDSTSVIVSGLMVATKYEVSVYALKDT 1797
Query: 265 EISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
S P T+ P R T T ++ + W +QV
Sbjct: 1798 LTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQVDAI--- 1848
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P TP+ ++ + GL+PG Y++ + T++
Sbjct: 1849 PANGQTPVQRTISPDVRSYTITGLQPGTDYKIHLYTLN 1886
>UNIPROTKB|D4AEE1 [details] [associations]
symbol:Fn1 "Fibronectin" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060
RGD:2624 GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR013806 SUPFAM:SSF57440
Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059
PROSITE:PS00023 PROSITE:PS51092 UniGene:Rn.1604 EMBL:CH474044
IPI:IPI00957985 Ensembl:ENSRNOT00000019152 Uniprot:D4AEE1
Length = 2387
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 90/339 (26%), Positives = 145/339 (42%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSE--GL-PGTKYDFYLYYTNSTVHDWLTWTA 84
YR+D +P + P + N F+E GL PG Y F ++ + + TA
Sbjct: 936 YRVDVLPVN---LPGEHGQRLPVNRNT-FAEVTGLSPGVTYLFKVFAVHQG-RESKPLTA 990
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
TT D PTNL + +T + W+PP + +G++L V L+ P+ + P
Sbjct: 991 QQTTKLDAPTNLQFVNETDRTVLVTWTPP-RARIAGYRLTV-GLTRGGQPK--QYNVGPM 1046
Query: 145 AG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE---TTLL 200
A Y L++L PG Y V L +V +++S T FTT P + I + E TT++
Sbjct: 1047 ASKYPLRNLQPGSEYTVTLMAVKGNQQSPKATGV-FTTLQ--PLRSIPPYNTEVTETTIV 1103
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W P+ P +K+ + P E+ V + GL PG Y ++Q
Sbjct: 1104 ITWTPA-PR---IGFKLGVRPSQGGEAPREVTSDS-----GSIVVSGLTPGVEYTYTIQV 1154
Query: 261 VSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1155 LRDGQERDAPIVNRVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITTTPT 1212
Query: 320 RPGASSTPITKS-RDEPTQCDMSEGLEPGRTYQVLVKTV 357
G T + + + + C E L PG Y V V TV
Sbjct: 1213 N-GQQGTALEEVVHADQSSCTF-ENLNPGLEYNVSVYTV 1249
Score = 198 (74.8 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 87/353 (24%), Positives = 138/353 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G V + + F PG +Y+ +Y
Sbjct: 1190 LTVSWERSTTPDITGYRITTTPTNGQQGTALEEVVHADQSSCTFENLNPGLEYNVSVYTV 1249
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1250 KD---DKESAPISDTVIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1306
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1307 GIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1364
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P SI T+ V P E V E P A L+
Sbjct: 1365 FTNIGPDTMRVTWAP--PPSIELTNLLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLL 1419
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG--FS 307
PG Y +SV +V E S P + +T P F D + +T+NS V W P+
Sbjct: 1420 PGTEYLVSVSSVYEQHESIPLRGRQKTGLDSPTGF--DSSDVTANSFTVHWVAPRAPITG 1477
Query: 308 EFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ + RP P SR+ T + L PG Y V + V+G+
Sbjct: 1478 YIIRHHAEHSAGRPRQDRVP--PSRNSITLTN----LNPGTEYIVTIIAVNGR 1524
Score = 197 (74.4 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 88/347 (25%), Positives = 143/347 (41%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 742 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGKQS 799
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 800 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 857
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT---PGKFIVWFRN 195
E + +L DL PG Y + +++V +++ES + + T P + P + F
Sbjct: 858 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDDVPAPKDLQFVE 916
Query: 196 ETTLLV--LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ-AAFKGLVPGR 252
T + V +W P P S T Y+V + P + P + P A GL PG
Sbjct: 917 VTDVKVTIMWTP--PNSAVTGYRVDVLPVNLPGE----HGQRLPVNRNTFAEVTGLSPGV 970
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y V V + S P TAQ T P + + + T ++ V W PP+ + Y
Sbjct: 971 TYLFKVFAVHQGRESKPLTAQQTTKLDAPTNLQF--VNETDRTVLVTWTPPR--ARIAGY 1026
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++++ + R G P + L+PG Y V + V G
Sbjct: 1027 RLTVGLTRGGQ---PKQYNVGPMASKYPLRNLQPGSEYTVTLMAVKG 1070
Score = 193 (73.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 86/333 (25%), Positives = 139/333 (41%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDWLTWTAS 85
YR+ P +G P + VS D E + EGL P +Y +Y N +
Sbjct: 1662 YRVTTAPKNGLGPTKSQTVS---PDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTA 1718
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPP-RIIGFTENPP 144
+TT P PTNL S T W+ P S K +G++++V EKT P + I + +
Sbjct: 1719 VTTIP-APTNLKFTQVSPTTLTAQWTAP-SVKLTGYRVRVTP-KEKTGPMKEINLSPDST 1775
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PGKFIVWFRNETTLLVL 202
+ + L Y+V ++++ D+ S TT N P + V ETT+ +
Sbjct: 1776 S-VIVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPRRARVTDATETTITIS 1833
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W+ T ++V P + V + P GL PG Y I + T++
Sbjct: 1834 WRTK--TETITGFQVDAIPANGQTPV----QRTISPDVRSYTITGLQPGTDYKIHLYTLN 1887
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
++ S+P T P + + + T NSL V W+ P+ + Y I +PG
Sbjct: 1888 DNARSSPVVIDASTAIDAPSNLRF--LTTTPNSLLVSWQAPR--ARITGY--IIKYEKPG 1941
Query: 323 ASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
+ + + R T+ ++ GLEPG Y + V
Sbjct: 1942 SPPREVVPRPRPGVTEATIT-GLEPGTEYTIYV 1973
Score = 180 (68.4 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 75/296 (25%), Positives = 126/296 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTW-TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
T++DF + + +T TA + P T+ SV + + + W S SGF
Sbjct: 693 TRFDFTTSASTPVTSNTVTGETAPFS--PVVATSESVTEITASSFVVSWVSA-SDTVSGF 749
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+++ E P+ + + ++ DL PG Y V ++ + + + S + TT
Sbjct: 750 RVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGKQSLILSTSQTT 808
Query: 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241
P+ P V ++T+++V W S P + T Y++ P SV E P A
Sbjct: 809 APDAPPDPTVDQVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPETA 861
Query: 242 QAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSNS 295
+ L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 862 NSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDDVPAPKDLQFVEVTDVK 921
Query: 296 LRVVWEPPKGFSEFDKYQVSI-NVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTY 350
+ ++W PP S Y+V + V PG + +R+ T +++ GL PG TY
Sbjct: 922 VTIMWTPPN--SAVTGYRVDVLPVNLPGEHGQRLPVNRN--TFAEVT-GLSPGVTY 972
Score = 155 (59.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 71/305 (23%), Positives = 120/305 (39%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 1326 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNIGPDTMRVTWAPPPSI 1383
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ + ++ + + + + + A L +L PG Y V + SVY+ ES+
Sbjct: 1384 ELTNLLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRG 1442
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE 236
R T ++P F + V W P + T Y + A S ++
Sbjct: 1443 RQ-KTGLDSPTGFDSSDVTANSFTVHWVA--PRAPITGYIIR---HHAEHSAGRPRQDRV 1496
Query: 237 PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
PP L PG Y +++ V+ E S P Q T+ P + + T SL
Sbjct: 1497 PPSRNSITLTNLNPGTEYIVTIIAVNGREESPPLIGQQSTVSDVPRDL--EVIASTPTSL 1554
Query: 297 RVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVK 355
+ WEPP + Y+++ G +S P+ + ++ + ++PG Y + +
Sbjct: 1555 LISWEPPAVSVRY--YRITYG--ETGGNS-PVQEFTVPGSKSTATINNIKPGADYTITLY 1609
Query: 356 TVSGK 360
V+G+
Sbjct: 1610 AVTGR 1614
Score = 153 (58.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 62/258 (24%), Positives = 103/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P +S D ++ S + TKY+ +Y T+ +T
Sbjct: 1752 YRVRVTPKEKTGPMKEINLSPD-STSVIVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1809
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + +TP + T +P
Sbjct: 1810 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQTP---VQRTISPDV 1865
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1866 RSYTITGLQPGTDYKIHLYTLNDNARSSPVVI-DASTAIDAPSNLRFLTTTPNSLLVSWQ 1924
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 1925 A--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIYVIALKNN 1979
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 1980 QKSEPLIGRKKTDELPQL 1997
Score = 152 (58.6 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 71/268 (26%), Positives = 106/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1091 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1141
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E A T + P + +T +L V W+ S
Sbjct: 1142 LTPGVEYTYTIQVLRDGQERDAPIVNRVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1201
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + +E + F+ L PG YN+SV TV +D+ S P
Sbjct: 1202 I-TGYRITTTPTNGQQGTAL--EEVVHADQSSCTFENLNPGLEYNVSVYTVKDDKESAPI 1258
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P IT +S+ + W P S Y++++ G PI +
Sbjct: 1259 SDT--VIPEVPQLTDLSFVDITDSSIGLRWTPLNS-STIIGYRITVVAAGEGI---PIFE 1312
Query: 331 SR-DEPTQCDMSEGLEPGRTYQVLVKTV 357
D GLEPG Y + V T+
Sbjct: 1313 DFVDSSVGYYTVTGLEPGIDYDISVITL 1340
>UNIPROTKB|F1P6H7 [details] [associations]
symbol:FN1 "Fibronectin" species:9615 "Canis lupus
familiaris" [GO:0042060 "wound healing" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0018149 "peptide cross-linking" evidence=IEA] [GO:0016504
"peptidase activator activity" evidence=IEA] [GO:0016324 "apical
plasma membrane" evidence=IEA] [GO:0007161 "calcium-independent
cell-matrix adhesion" evidence=IEA] [GO:0007044 "cell-substrate
junction assembly" evidence=IEA] [GO:0005793 "endoplasmic
reticulum-Golgi intermediate compartment" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005577 "fibrinogen complex"
evidence=IEA] InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039
Pfam:PF00041 PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091
SMART:SM00058 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0005577 GO:GO:0016504
GO:GO:0042060 GO:GO:0034446 GO:GO:0005604 GO:GO:0005793
GO:GO:0018149 InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GeneTree:ENSGT00700000104067 GO:GO:0007044
OMA:IPGHLNS GO:GO:0007161 EMBL:AAEX03018114
Ensembl:ENSCAFT00000022799 Uniprot:F1P6H7
Length = 2426
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 84/347 (24%), Positives = 148/347 (42%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 693 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGEQS 750
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 751 LILSTSQTTAPDAPPDPAVDRVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 808
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT----PGKFIVWFR 194
E + +L DL PG Y + +++V +++ES + + T P + P + + +
Sbjct: 809 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVE 867
Query: 195 -NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ-AAFKGLVPGR 252
+ + ++W P P S T Y+V + P + P + P A GL PG
Sbjct: 868 VTDVKITIMWTP--PESTVTGYRVDVIPVNLPGE----HGQRLPINRNTFAEVTGLSPGV 921
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y+ V V++ S P TA+ T P + + A+ T +++ V+W PP+ + Y
Sbjct: 922 TYHFKVFAVNQGRESRPLTAEQTTKLDAPTNLRF--ANETDSTVLVIWTPPR--ARIAGY 977
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++++ R G +Q + L+P Y V + V G
Sbjct: 978 RLTVGPTRGGHPKQ--YNVGPSASQYPL-RNLQPATEYTVSLVAVKG 1021
Score = 197 (74.4 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 84/352 (23%), Positives = 142/352 (40%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y
Sbjct: 1141 LTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTV 1200
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1201 KD---DKESVPISDTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1257
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1258 GIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1315
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P SI T++ V P E V + P L+
Sbjct: 1316 FTNIGPDTMRVTWAP--PPSIELTNFLVRYSPVKNEEDVAELSIS---PSDNVVVLTNLL 1370
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG Y +SV +V E STP + +T P D + IT+NS V W P+ +
Sbjct: 1371 PGTEYLVSVSSVYEQHESTPLRGRQKTGLDSPSGI--DFSDITANSFTVHWIAPR--ATI 1426
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
Y++ P +S + R P++ ++ L PG Y V + ++G+
Sbjct: 1427 TGYRIR---HHPEHTSGRPREDRVPPSRNSITLTNLNPGTEYVVSIIALNGR 1475
Score = 196 (74.1 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 83/305 (27%), Positives = 131/305 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDP--PTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T++DF T+ V T T TTP P T+ SV + + + W S SG
Sbjct: 643 TRFDFTTTSTSPPVTS-NTVTGE-TTPLSPVVATSESVTEITASSFVVSWVSA-SDTVSG 699
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++ E P+ + + ++ DL PG Y V ++ + + E S + T
Sbjct: 700 FRVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGEQSLILSTSQT 758
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
T P+ P V ++T+++V W S P + T Y++ P SV E P
Sbjct: 759 TAPDAPPDPAVDRVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPET 811
Query: 241 AQAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSN 294
A + L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 812 ANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDKVPPPRDLQFVEVTDV 871
Query: 295 SLRVVWEPPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353
+ ++W PP+ S Y+V I V PG + +R+ T +++ GL PG TY
Sbjct: 872 KITIMWTPPE--STVTGYRVDVIPVNLPGEHGQRLPINRN--TFAEVT-GLSPGVTYHFK 926
Query: 354 VKTVS 358
V V+
Sbjct: 927 VFAVN 931
Score = 165 (63.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 80/339 (23%), Positives = 139/339 (41%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW----LTWT 83
++L P+ G P V+ D +I S PG +Y YT S + D
Sbjct: 1065 FKLGVRPSQGGEAPRE--VTSD-SGSIVVSGLTPGVEY----VYTISVLRDGQERDTPIV 1117
Query: 84 ASITTPPDPPTNLSV--NVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
+ TP PPTNL + N +G + W + +G+++ + + +
Sbjct: 1118 KKVVTPLSPPTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGYSLEEVVH 1176
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN--ETTL 199
+ + ++L+PG Y V +++V D KESV + T P P + F + ++++
Sbjct: 1177 ADQSSCTFENLSPGLEYNVSVYTVKDDKESVPISD---TIIPEVPQLTDLSFVDITDSSI 1233
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
+ W P ++I Y++++ A E + E + GL PG Y+ISV
Sbjct: 1234 GLRWTPLNSSTIIG-YRITVVA--AGEGIPIFE-DFVDSSVGYYTVTGLEPGIDYDISVI 1289
Query: 260 TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
T+ S PTT +T P + +I +++RV W PP E + V +
Sbjct: 1290 TLINGGESAPTTLTQQTAVPPPTDLRF--TNIGPDTMRVTWAPPPSI-ELTNFLVRYS-- 1344
Query: 320 RPGASSTPITKSRDEPTQ-CDMSEGLEPGRTYQVLVKTV 357
P + + + P+ + L PG Y V V +V
Sbjct: 1345 -PVKNEEDVAELSISPSDNVVVLTNLLPGTEYLVSVSSV 1382
Score = 161 (61.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 82/348 (23%), Positives = 145/348 (41%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D +++ +GL PG++Y +
Sbjct: 1689 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGEEDTAELQGLRPGSEYTVSVVA 1745
Query: 72 TNSTVHDW-LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
+ + L T S P + + TAQ W+ P + + +G++++V E
Sbjct: 1746 LHDDMESQPLIGTQSTAIPAPADLKFTQVTPTSLTAQ--WTAP-NVQLTGYRVRVTP-KE 1801
Query: 131 KTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PG 187
KT P + I + + + L Y+V ++++ D+ S TT N P
Sbjct: 1802 KTGPMKEINLAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPR 1859
Query: 188 KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG 247
+ V ETT+ + W+ T ++V P + + + P G
Sbjct: 1860 RARVTDATETTITISWRTK--TETITGFQVDAIPANGQNPIQRTIR----PDVRSYTITG 1913
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFS 307
L PG Y I + T++++ S+P T P + + + T NSL V W+PP+ +
Sbjct: 1914 LQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR--A 1969
Query: 308 EFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 1970 RITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIQV 2014
Score = 159 (61.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 72/307 (23%), Positives = 121/307 (39%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 1277 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNIGPDTMRVTWAPPPSI 1334
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ + F ++ + + + + + L +L PG Y V + SVY+ ES
Sbjct: 1335 ELTNFLVRYSPVKNEEDVAELSISPSDNV-VVLTNLLPGTEYLVSVSSVYEQHESTPLRG 1393
Query: 177 RNFTTKPNTPGKFIVWFRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
R T + G + F + T + V W P + T Y++ P ++
Sbjct: 1394 RQKTGLDSPSG---IDFSDITANSFTVHWIA--PRATITGYRIRHHPEHTSGRP---RED 1445
Query: 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSN 294
PP L PG Y +S+ ++ E S P Q T+ P + + T
Sbjct: 1446 RVPPSRNSITLTNLNPGTEYVVSIIALNGREESPPLIGQQSTVSDVPRDL--EVIAATPT 1503
Query: 295 SLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVL 353
SL + W+ P + Y+++ G +S P+ + ++ + GL+PG Y +
Sbjct: 1504 SLLISWDAPAVTVRY--YRITYG--ETGGNS-PVQEFTVPGSKSTATISGLKPGADYTIT 1558
Query: 354 VKTVSGK 360
V V+G+
Sbjct: 1559 VYAVTGR 1565
Score = 156 (60.0 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 62/258 (24%), Positives = 102/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 1793 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1850
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + + P I T P
Sbjct: 1851 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQNP---IQRTIRPDV 1906
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1907 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 1965
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 1966 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIQVIALKNN 2020
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 2021 QKSEPLIGRKKTDELPQL 2038
Score = 154 (59.3 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 71/268 (26%), Positives = 107/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1042 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1092
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E + T + P + +T +L V W+ S
Sbjct: 1093 LTPGVEYVYTISVLRDGQERDTPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1152
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + Y +E + F+ L PG YN+SV TV +D+ S P
Sbjct: 1153 I-TGYRITTTPTNGQQG--YSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPI 1209
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P IT +S+ + W P S Y++++ G PI +
Sbjct: 1210 SDTI--IPEVPQLTDLSFVDITDSSIGLRWTPLNS-STIIGYRITVVAAGEGI---PIFE 1263
Query: 331 SR-DEPTQCDMSEGLEPGRTYQVLVKTV 357
D GLEPG Y + V T+
Sbjct: 1264 DFVDSSVGYYTVTGLEPGIDYDISVITL 1291
Score = 135 (52.6 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 77/344 (22%), Positives = 125/344 (36%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P P+ T + D E + EGL P +Y +Y N
Sbjct: 1607 SSPVTGYRVTTTPKNG-PGPSKTKTAGP--DQTEMTIEGLQPTVEYVVSVYAQNRNGESQ 1663
Query: 80 -LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIG 138
L TA T D P L+ + +I W P G+ S +++ S E +
Sbjct: 1664 PLVQTA--VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFP 1719
Query: 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETT 198
+ L+ L PG Y V + +++D ES T P P T+
Sbjct: 1720 APDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTAIP-APADLKFTQVTPTS 1778
Query: 199 LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
L W + P T Y+V + P + + + P + GL+ Y +SV
Sbjct: 1779 LTAQW--TAPNVQLTGYRVRVTPKEKTGPMKEINLA---PDSSSVVVSGLMVATKYEVSV 1833
Query: 259 QTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+ + S P T+ P R T T ++ + W +QV
Sbjct: 1834 YALKDTLTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQV 1887
Query: 315 SINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P PI ++ + GL+PG Y++ + T++
Sbjct: 1888 DAI---PANGQNPIQRTIRPDVRSYTITGLQPGTDYKIYLYTLN 1928
Score = 43 (20.2 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKT 356
+ W P F E +Y +S + G P+ + R T + GL G TY ++V+
Sbjct: 2162 ISWTP---FQESSEYIISCHP--VGIDEEPL-QFRVPGTSASATLTGLTRGATYNIIVEA 2215
Query: 357 V 357
+
Sbjct: 2216 L 2216
>UNIPROTKB|G3V7W2 [details] [associations]
symbol:Fn1 "Fibronectin 1, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039
Pfam:PF00041 PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091
SMART:SM00058 SMART:SM00060 RGD:2624 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GeneTree:ENSGT00700000104067 CTD:2335 KO:K05717
OMA:IPGHLNS UniGene:Rn.1604 EMBL:CH474044 RefSeq:NP_062016.2
Ensembl:ENSRNOT00000019772 GeneID:25661 KEGG:rno:25661
NextBio:607565 Uniprot:G3V7W2
Length = 2477
Score = 202 (76.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 90/339 (26%), Positives = 145/339 (42%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSE--GL-PGTKYDFYLYYTNSTVHDWLTWTA 84
YR+D +P + P + N F+E GL PG Y F ++ + + TA
Sbjct: 936 YRVDVLPVN---LPGEHGQRLPVNRNT-FAEVTGLSPGVTYLFKVFAVHQG-RESKPLTA 990
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
TT D PTNL + +T + W+PP + +G++L V L+ P+ + P
Sbjct: 991 QQTTKLDAPTNLQFVNETDRTVLVTWTPP-RARIAGYRLTV-GLTRGGQPK--QYNVGPM 1046
Query: 145 AG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE---TTLL 200
A Y L++L PG Y V L +V +++S T FTT P + I + E TT++
Sbjct: 1047 ASKYPLRNLQPGSEYTVTLMAVKGNQQSPKATGV-FTTLQ--PLRSIPPYNTEVTETTIV 1103
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W P+ P +K+ + P E+ V + GL PG Y ++Q
Sbjct: 1104 ITWTPA-PR---IGFKLGVRPSQGGEAPREVTSDS-----GSIVVSGLTPGVEYTYTIQV 1154
Query: 261 VSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1155 LRDGQERDAPIVNRVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITTTPT 1212
Query: 320 RPGASSTPITKS-RDEPTQCDMSEGLEPGRTYQVLVKTV 357
G T + + + + C E L PG Y V V TV
Sbjct: 1213 N-GQQGTALEEVVHADQSSCTF-ENLNPGLEYNVSVYTV 1249
Score = 198 (74.8 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 87/353 (24%), Positives = 138/353 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G V + + F PG +Y+ +Y
Sbjct: 1190 LTVSWERSTTPDITGYRITTTPTNGQQGTALEEVVHADQSSCTFENLNPGLEYNVSVYTV 1249
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1250 KD---DKESAPISDTVIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1306
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1307 GIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1364
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P SI T+ V P E V E P A L+
Sbjct: 1365 FTNIGPDTMRVTWAP--PPSIELTNLLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLL 1419
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG--FS 307
PG Y +SV +V E S P + +T P F D + +T+NS V W P+
Sbjct: 1420 PGTEYLVSVSSVYEQHESIPLRGRQKTGLDSPTGF--DSSDVTANSFTVHWVAPRAPITG 1477
Query: 308 EFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ + RP P SR+ T + L PG Y V + V+G+
Sbjct: 1478 YIIRHHAEHSAGRPRQDRVP--PSRNSITLTN----LNPGTEYIVTIIAVNGR 1524
Score = 197 (74.4 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 88/347 (25%), Positives = 143/347 (41%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 742 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGKQS 799
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 800 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 857
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT---PGKFIVWFRN 195
E + +L DL PG Y + +++V +++ES + + T P + P + F
Sbjct: 858 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDDVPAPKDLQFVE 916
Query: 196 ETTLLV--LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ-AAFKGLVPGR 252
T + V +W P P S T Y+V + P + P + P A GL PG
Sbjct: 917 VTDVKVTIMWTP--PNSAVTGYRVDVLPVNLPGE----HGQRLPVNRNTFAEVTGLSPGV 970
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y V V + S P TAQ T P + + + T ++ V W PP+ + Y
Sbjct: 971 TYLFKVFAVHQGRESKPLTAQQTTKLDAPTNLQF--VNETDRTVLVTWTPPR--ARIAGY 1026
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++++ + R G P + L+PG Y V + V G
Sbjct: 1027 RLTVGLTRGGQ---PKQYNVGPMASKYPLRNLQPGSEYTVTLMAVKG 1070
Score = 183 (69.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 76/315 (24%), Positives = 134/315 (42%)
Query: 51 KDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFW 110
+++I + PGT+Y + N + +T D P +L V + + I W
Sbjct: 1500 RNSITLTNLNPGTEYIVTIIAVNGR-EESPPLIGQQSTVSDVPRDLEVIASTPTSLLISW 1558
Query: 111 SPP-ISGKYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSVY-- 166
PP +S +Y +++ +P + FT + ++ ++ PG Y + L++V
Sbjct: 1559 EPPAVSVRY--YRITYGETGGNSP--VQEFTVPGSKSTATINNIKPGADYTITLYAVTGR 1614
Query: 167 -DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
DS S S N+ T+ + P + V + ++ V W PS S T Y+V+ AP
Sbjct: 1615 GDSPASSKPVSINYQTEIDKPSQMQVTDVQDNSISVRWLPS--TSPVTGYRVTT----AP 1668
Query: 226 ESVLYVEK-EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSF 284
++ L K + P + +GL P Y +SV + + S P T RP
Sbjct: 1669 KNGLGPTKSQTVSPDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGL 1728
Query: 285 TYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGL 344
+ + +S+++ WE P+G + +Y+V+ + G DE T ++ GL
Sbjct: 1729 AFTDVDV--DSIKIAWESPQG--QVSRYRVTYSSPEDGIHELFPAPDGDEDT-AEL-HGL 1782
Query: 345 EPGRTYQVLVKTVSG 359
PG Y V V + G
Sbjct: 1783 RPGSEYTVSVVALHG 1797
Score = 180 (68.4 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 75/296 (25%), Positives = 126/296 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTW-TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
T++DF + + +T TA + P T+ SV + + + W S SGF
Sbjct: 693 TRFDFTTSASTPVTSNTVTGETAPFS--PVVATSESVTEITASSFVVSWVSA-SDTVSGF 749
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+++ E P+ + + ++ DL PG Y V ++ + + + S + TT
Sbjct: 750 RVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGKQSLILSTSQTT 808
Query: 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241
P+ P V ++T+++V W S P + T Y++ P SV E P A
Sbjct: 809 APDAPPDPTVDQVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPETA 861
Query: 242 QAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSNS 295
+ L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 862 NSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDDVPAPKDLQFVEVTDVK 921
Query: 296 LRVVWEPPKGFSEFDKYQVSI-NVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTY 350
+ ++W PP S Y+V + V PG + +R+ T +++ GL PG TY
Sbjct: 922 VTIMWTPPN--SAVTGYRVDVLPVNLPGEHGQRLPVNRN--TFAEVT-GLSPGVTY 972
Score = 165 (63.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 85/347 (24%), Positives = 142/347 (40%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D ++ GL PG++Y +
Sbjct: 1738 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGDEDTAELHGLRPGSEYTVSVVA 1794
Query: 72 TNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK 131
+ + T P PTNL S T W+ P S K +G++++V EK
Sbjct: 1795 LHGGMESQPLIGVQSTAIP-APTNLKFTQVSPTTLTAQWTAP-SVKLTGYRVRVTP-KEK 1851
Query: 132 TPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PGK 188
T P + I + + + + L Y+V ++++ D+ S TT N P +
Sbjct: 1852 TGPMKEINLSPDSTS-VIVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPRR 1909
Query: 189 FIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL 248
V ETT+ + W+ T ++V P + V + P GL
Sbjct: 1910 ARVTDATETTITISWRTK--TETITGFQVDAIPANGQTPV----QRTISPDVRSYTITGL 1963
Query: 249 VPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSE 308
PG Y I + T++++ S+P T P + + + T NSL V W+ P+ +
Sbjct: 1964 QPGTDYKIHLYTLNDNARSSPVVIDASTAIDAPSNLRF--LTTTPNSLLVSWQAPR--AR 2019
Query: 309 FDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 2020 ITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIYV 2063
Score = 155 (59.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 71/305 (23%), Positives = 120/305 (39%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 1326 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNIGPDTMRVTWAPPPSI 1383
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ + ++ + + + + + A L +L PG Y V + SVY+ ES+
Sbjct: 1384 ELTNLLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRG 1442
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE 236
R T ++P F + V W P + T Y + A S ++
Sbjct: 1443 RQ-KTGLDSPTGFDSSDVTANSFTVHWVA--PRAPITGYIIR---HHAEHSAGRPRQDRV 1496
Query: 237 PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
PP L PG Y +++ V+ E S P Q T+ P + + T SL
Sbjct: 1497 PPSRNSITLTNLNPGTEYIVTIIAVNGREESPPLIGQQSTVSDVPRDL--EVIASTPTSL 1554
Query: 297 RVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVK 355
+ WEPP + Y+++ G +S P+ + ++ + ++PG Y + +
Sbjct: 1555 LISWEPPAVSVRY--YRITYG--ETGGNS-PVQEFTVPGSKSTATINNIKPGADYTITLY 1609
Query: 356 TVSGK 360
V+G+
Sbjct: 1610 AVTGR 1614
Score = 153 (58.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 62/258 (24%), Positives = 103/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P +S D ++ S + TKY+ +Y T+ +T
Sbjct: 1842 YRVRVTPKEKTGPMKEINLSPD-STSVIVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1899
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + +TP + T +P
Sbjct: 1900 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQTP---VQRTISPDV 1955
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1956 RSYTITGLQPGTDYKIHLYTLNDNARSSPVVI-DASTAIDAPSNLRFLTTTPNSLLVSWQ 2014
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 2015 A--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIYVIALKNN 2069
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 2070 QKSEPLIGRKKTDELPQL 2087
Score = 152 (58.6 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 71/268 (26%), Positives = 106/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1091 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1141
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E A T + P + +T +L V W+ S
Sbjct: 1142 LTPGVEYTYTIQVLRDGQERDAPIVNRVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1201
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + +E + F+ L PG YN+SV TV +D+ S P
Sbjct: 1202 I-TGYRITTTPTNGQQGTAL--EEVVHADQSSCTFENLNPGLEYNVSVYTVKDDKESAPI 1258
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P IT +S+ + W P S Y++++ G PI +
Sbjct: 1259 SDT--VIPEVPQLTDLSFVDITDSSIGLRWTPLNS-STIIGYRITVVAAGEGI---PIFE 1312
Query: 331 SR-DEPTQCDMSEGLEPGRTYQVLVKTV 357
D GLEPG Y + V T+
Sbjct: 1313 DFVDSSVGYYTVTGLEPGIDYDISVITL 1340
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 75/338 (22%), Positives = 121/338 (35%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW-LTWTA 84
YR+ P +G P + VS D E + EGL P +Y +Y N L TA
Sbjct: 1662 YRVTTAPKNGLGPTKSQTVS---PDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTA 1718
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P L+ + +I W P G+ S +++ S E + +
Sbjct: 1719 --VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFPAPDGDE 1774
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
L L PG Y V + +++ ES T P P + TTL W
Sbjct: 1775 DTAELHGLRPGSEYTVSVVALHGGMESQPLIGVQSTAIP-APTNLKFTQVSPTTLTAQW- 1832
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
+ P+ T Y+V + P + + + P GL+ Y +SV + +
Sbjct: 1833 -TAPSVKLTGYRVRVTPKEKTGPMKEINLS---PDSTSVIVSGLMVATKYEVSVYALKDT 1888
Query: 265 EISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
S P T+ P R T T ++ + W +QV
Sbjct: 1889 LTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQVDAI--- 1939
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P TP+ ++ + GL+PG Y++ + T++
Sbjct: 1940 PANGQTPVQRTISPDVRSYTITGLQPGTDYKIHLYTLN 1977
>UNIPROTKB|F1NPJ1 [details] [associations]
symbol:TNR "Tenascin-R" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007158 "neuron cell-cell adhesion" evidence=IEA]
[GO:0008306 "associative learning" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0022029 "telencephalon cell migration"
evidence=IEA] [GO:0022408 "negative regulation of cell-cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0035641 "locomotory exploration
behavior" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
[GO:0048692 "negative regulation of axon extension involved in
regeneration" evidence=IEA] [GO:0050805 "negative regulation of
synaptic transmission" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0051968 "positive regulation
of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA] [GO:0072534
"perineuronal net" evidence=IEA] InterPro:IPR003961 Pfam:PF00041
PROSITE:PS50853 SMART:SM00060 INTERPRO:IPR002181 GO:GO:0005634
GO:GO:0005737 GO:GO:0007165 GO:GO:0009986 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0060291 SUPFAM:SSF49265 GO:GO:0005578
GO:GO:0030198 GO:GO:0050808 GO:GO:0051968 GO:GO:0045121
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 GO:GO:0050805
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 GO:GO:0007158 GO:GO:0022408 GO:GO:0072534
GeneTree:ENSGT00690000102056 IPI:IPI00600737 OMA:KACPCAS
EMBL:AADN02034168 EMBL:AADN02034166 EMBL:AADN02034167
Ensembl:ENSGALT00000007207 Uniprot:F1NPJ1
Length = 1353
Score = 198 (74.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 82/278 (29%), Positives = 122/278 (43%)
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
SI+T D PT + V S A + W+PP + LK L++ R F PP
Sbjct: 498 SISTLIDGPTQILVRDVSDTVAFVEWTPP-RARVDAILLKY-GLADGEGGRTT-FRLQPP 554
Query: 145 AG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
YSL+ L PG Y + + ++ + ES ++ FTT+ + P V R +L + W
Sbjct: 555 LSQYSLQALRPGARYHLAVSALRGANESQPALAQ-FTTEIDAPKNLRVGSRTPASLELTW 613
Query: 204 QPSYPASIYTHYKV-SIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
S A +++ V S + VL V ++ P +A LVPG Y I + V
Sbjct: 614 DNS-EAEAHSYRVVYSTLAGEHYHEVL-VPRDTGPT--TRATLADLVPGTEYGIGISAVM 669
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
+ + S P T RT P ++ TS SL W K D Y+V+
Sbjct: 670 DSQQSVPATMNARTELDSPRDLLVTASTETSISLS--WT--KAMGPIDHYRVTFTPASGM 725
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
AS +T SR+E +Q +SE LEPG Y + + G+
Sbjct: 726 ASE--VTVSRNE-SQLTLSE-LEPGTEYTISIIAERGR 759
Score = 169 (64.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 67/277 (24%), Positives = 118/277 (42%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLS-EKTPPRIIGFTEN 142
A TT D P NL V R+ + ++ W + +S +++ +L+ E ++
Sbjct: 587 AQFTTEIDAPKNLRVGSRTPASLELTWDNSEAEAHS-YRVVYSTLAGEHYHEVLVPRDTG 645
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
P +L DL PG Y + + +V DS++SV T N T+ ++P +V ET++ +
Sbjct: 646 PTTRATLADLVPGTEYGIGISAVMDSQQSVPATM-NARTELDSPRDLLVTASTETSISLS 704
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W + HY+V+ P S + V + +Q L PG Y IS+
Sbjct: 705 WTKAMGP--IDHYRVTFTPASGMASEVTVSRN-----ESQLTLSELEPGTEYTISIIAER 757
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
+ S T T +RP++ + + +TS+S+ + W P D+ ++ + R
Sbjct: 758 GRQQSLEATVDAFT-GVRPITQLHF-SQLTSSSVNITWSDPS--PPADRLVLTYSSRDEE 813
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
A+ + D + GL P Y V + V G
Sbjct: 814 AAQQ---LALDGTRRHASLTGLRPSTEYLVSLVAVHG 847
Score = 149 (57.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 72/298 (24%), Positives = 116/298 (38%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ + PA G T VSR+ + + SE PGT+Y + L T
Sbjct: 715 YRVTFTPASGMASEVT--VSRN-ESQLTLSELEPGTEYTISIIAERGRQQS-LEATVDAF 770
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T P T L + + + I WS P S L S E+ ++ +
Sbjct: 771 TGVRPITQLHFSQLTSSSVNITWSDP-SPPADRLVLTYSSRDEEAAQQLA--LDGTRRHA 827
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207
SL L P Y V L +V+ + S T + TT + P V + ++++ W P
Sbjct: 828 SLTGLRPSTEYLVSLVAVHGAVSSEPVTG-SITTGMDAPKDLRVGNITQDSMVIYWSP-- 884
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV---SED 264
P + + HY++S + + + + + L P Y I V++V E
Sbjct: 885 PVAPFDHYRISYRAAEGRTDSTAIGNDA-----TEYIMRLLQPATKYEIGVKSVRGREES 939
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
E+++ TT Y + PL T +IT + W PP + + Y V + R G
Sbjct: 940 EVASITT--YTAMDA-PLGVT--ATNITPTEALLQWNPP--LMDVESY-VLVLTRHTG 989
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 72/341 (21%), Positives = 133/341 (39%)
Query: 21 LSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDN---IEFSEGLPGTKYDFYLYYTNSTVH 77
L+ D+ +Y+ ++ P + + + + + I +E PG Y+ +Y S V
Sbjct: 343 LAWDSPGAATEYVVSYQPAGPGGSQLQQRVPGDWSTITITELEPGVAYNVSIYAVISDVL 402
Query: 78 DWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRII 137
T +TT P L + T ++ W P S + G+++ I + + +I
Sbjct: 403 SSPV-TTKVTTNLATPQGLKFKTITETTVEVQWEP-FSFPFDGWEISFIPKNNEGG--VI 458
Query: 138 GFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET 197
+ ++ L PG Y V + ++ D S S + +T + P + +V ++T
Sbjct: 459 AQLPSTVTTFNQTGLKPGEEYTVTVVALKDQARSPP-ASDSISTLIDGPTQILVRDVSDT 517
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
V W P K + + + ++ PP +Q + + L PG Y+++
Sbjct: 518 VAFVEWTPPRARVDAILLKYGLADGEGGRTTFRLQ----PP-LSQYSLQALRPGARYHLA 572
Query: 258 VQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
V + S P AQ+ T P + S T SL + W+ + +E Y+V +
Sbjct: 573 VSALRGANESQPALAQFTTEIDAPKNLRV--GSRTPASLELTWDNSE--AEAHSYRVVYS 628
Query: 318 VRRPGASSTPITKSRDE-PTQCDMSEGLEPGRTYQVLVKTV 357
G + RD PT L PG Y + + V
Sbjct: 629 TLA-GEHYHEVLVPRDTGPTTRATLADLVPGTEYGIGISAV 668
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 66/274 (24%), Positives = 108/274 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYS--- 148
PP NL V S + ++ W P G + + V+S + P + P +S
Sbjct: 327 PPENLRVTGISDGSIELAWDSP--GAATEY---VVSY-QPAGPGGSQLQQRVPGDWSTIT 380
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP-SY 207
+ +L PG +Y V +++V S T++ TT TP ETT+ V W+P S+
Sbjct: 381 ITELEPGVAYNVSIYAVISDVLSSPVTTK-VTTNLATPQGLKFKTITETTVEVQWEPFSF 439
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK-GLVPGRAYNISVQTVSEDEI 266
P + +++S P + V+ + P + GL PG Y ++V + +
Sbjct: 440 P---FDGWEISFIPKNNEGGVI-----AQLPSTVTTFNQTGLKPGEEYTVTVVALKDQAR 491
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST 326
S P + T+ P S T V W PP+ + D + + G
Sbjct: 492 SPPASDSISTLIDGPTQILVRDVSDTVAF--VEWTPPR--ARVDAILLKYGLA-DGEGGR 546
Query: 327 PITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSG 359
T R +P S + L PG Y + V + G
Sbjct: 547 --TTFRLQPPLSQYSLQALRPGARYHLAVSALRG 578
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 58/248 (23%), Positives = 99/248 (39%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGK 117
GL P T+Y L + V T SITT D P +L V + + I+WSPP++
Sbjct: 831 GLRPSTEYLVSLVAVHGAVSSEPV-TGSITTGMDAPKDLRVGNITQDSMVIYWSPPVA-P 888
Query: 118 YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSR 177
+ +++ + +T IG N Y ++ L P Y++ + SV +ES +
Sbjct: 889 FDHYRISYRAAEGRTDSTAIG---NDATEYIMRLLQPATKYEIGVKSVRGREESEVASIT 945
Query: 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
+T + P T L+ W P P Y V + E++L V+ +
Sbjct: 946 TYTAM-DAPLGVTATNITPTEALLQWNP--PLMDVESY-VLVLTRHTGETIL-VDGINQ- 999
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLR 297
+ L P Y +++ + S + + T+ P + T + +T S
Sbjct: 1000 ----EYQLTNLQPSTTYTVAMYATNGPLTSQTISTNFTTLLDPPTNLT--ASEVTRRSAL 1053
Query: 298 VVWEPPKG 305
+ W PP G
Sbjct: 1054 LSWVPPVG 1061
Score = 125 (49.1 bits), Expect = 0.00028, P = 0.00028
Identities = 56/215 (26%), Positives = 89/215 (41%)
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT-TKPNTPGKFIVWFRNETTLLVLWQ-P 205
+L +L PG Y + + + ++S+ T FT +P T F +++ + W P
Sbjct: 739 TLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLHFSQL--TSSSVNITWSDP 796
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
S PA S D A + L +G A+ GL P Y +S+ V
Sbjct: 797 SPPADRLVLTYSSRDEEAAQQLAL----DGTR---RHASLTGLRPSTEYLVSLVAVHGAV 849
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASS 325
S P T T P +IT +S+ + W PP + FD Y++S S
Sbjct: 850 SSEPVTGSITTGMDAPKDLRV--GNITQDSMVIYWSPP--VAPFDHYRISYRAAEGRTDS 905
Query: 326 TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
T I ++ T+ M L+P Y++ VK+V G+
Sbjct: 906 TAIG---NDATEYIMRL-LQPATKYEIGVKSVRGR 936
>UNIPROTKB|Q00546 [details] [associations]
symbol:TNR "Tenascin-R" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007158 "neuron cell-cell adhesion" evidence=IEA]
[GO:0008306 "associative learning" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0022029 "telencephalon cell migration"
evidence=IEA] [GO:0022408 "negative regulation of cell-cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0035641 "locomotory exploration
behavior" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
[GO:0048692 "negative regulation of axon extension involved in
regeneration" evidence=IEA] [GO:0050805 "negative regulation of
synaptic transmission" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0051968 "positive regulation
of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA] [GO:0072534
"perineuronal net" evidence=IEA] InterPro:IPR003961 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 INTERPRO:IPR002181
GO:GO:0005634 GO:GO:0005737 GO:GO:0007165 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0060291 SUPFAM:SSF49265
GO:GO:0005578 GO:GO:0030198 GO:GO:0050808 GO:GO:0051968
GO:GO:0045121 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0050805 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 GO:GO:0007158
GO:GO:0022408 GO:GO:0072534 HOVERGEN:HBG008949 KO:K06252
HOGENOM:HOG000234355 EMBL:X64649 IPI:IPI00588809 IPI:IPI00600737
PIR:JH0675 RefSeq:NP_990607.2 UniGene:Gga.711
ProteinModelPortal:Q00546 SMR:Q00546 STRING:Q00546 GeneID:396213
KEGG:gga:396213 CTD:7143 eggNOG:NOG311251 InParanoid:Q00546
OrthoDB:EOG42FSGP NextBio:20816265 Uniprot:Q00546
Length = 1353
Score = 198 (74.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 82/278 (29%), Positives = 122/278 (43%)
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
SI+T D PT + V S A + W+PP + LK L++ R F PP
Sbjct: 498 SISTLIDGPTQILVRDVSDTVAFVEWTPP-RARVDAILLKY-GLADGEGGRTT-FRLQPP 554
Query: 145 AG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
YSL+ L PG Y + + ++ + ES ++ FTT+ + P V R +L + W
Sbjct: 555 LSQYSLQALRPGARYHLAVSALRGANESQPALAQ-FTTEIDAPKNLRVGSRTPASLELTW 613
Query: 204 QPSYPASIYTHYKV-SIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
S A +++ V S + VL V ++ P +A LVPG Y I + V
Sbjct: 614 DNS-EAEAHSYRVVYSTLAGEHYHEVL-VPRDTGPT--TRATLADLVPGTEYGIGISAVM 669
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
+ + S P T RT P ++ TS SL W K D Y+V+
Sbjct: 670 DSQQSVPATMNARTELDSPRDLLVTASTETSISLS--WT--KAMGPIDHYRVTFTPASGM 725
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
AS +T SR+E +Q +SE LEPG Y + + G+
Sbjct: 726 ASE--VTVSRNE-SQLTLSE-LEPGTEYTISIIAERGR 759
Score = 173 (66.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 67/277 (24%), Positives = 117/277 (42%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLS-EKTPPRIIGFTEN 142
A TT D P NL V R+ + ++ W + +S +++ +L+ E ++
Sbjct: 587 AQFTTEIDAPKNLRVGSRTPASLELTWDNSEAEAHS-YRVVYSTLAGEHYHEVLVPRDTG 645
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
P +L DL PG Y + + +V DS++SV T N T+ ++P +V ET++ +
Sbjct: 646 PTTRATLADLVPGTEYGIGISAVMDSQQSVPATM-NARTELDSPRDLLVTASTETSISLS 704
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W + HY+V+ P S + V + +Q L PG Y IS+
Sbjct: 705 WTKAMGP--IDHYRVTFTPASGMASEVTVSRN-----ESQLTLSELEPGTEYTISIIAER 757
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
+ S T T +RP++ + + +TS+S+ + W P D+ ++ + P
Sbjct: 758 GRQQSLEATVDAFT-GVRPITQLHF-SQLTSSSVNITWSDPS--PPADRLVLTYS---PR 810
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
P + D + GL P Y V + V G
Sbjct: 811 DEEAPQQLALDGTRRHASLTGLRPSTEYLVSLVAVHG 847
Score = 152 (58.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 72/298 (24%), Positives = 116/298 (38%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ + PA G T VSR+ + + SE PGT+Y + L T
Sbjct: 715 YRVTFTPASGMASEVT--VSRN-ESQLTLSELEPGTEYTISIIAERGRQQS-LEATVDAF 770
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T P T L + + + I WS P S L E+ P ++ +
Sbjct: 771 TGVRPITQLHFSQLTSSSVNITWSDP-SPPADRLVLTYSPRDEEAPQQLA--LDGTRRHA 827
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207
SL L P Y V L +V+ + S T + TT + P V + ++++ W P
Sbjct: 828 SLTGLRPSTEYLVSLVAVHGAVSSEPVTG-SITTGMDAPKDLRVGNITQDSMVIYWSP-- 884
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV---SED 264
P + + HY++S + + + + + L P Y I V++V E
Sbjct: 885 PVAPFDHYRISYRAAEGRTDSTAIGNDA-----TEYIMRLLQPATKYEIGVKSVRGREES 939
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
E+++ TT Y + PL T +IT + W PP + + Y V + R G
Sbjct: 940 EVASITT--YTAMDA-PLGVT--ATNITPTEALLQWNPP--LMDVESY-VLVLTRHTG 989
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 72/341 (21%), Positives = 133/341 (39%)
Query: 21 LSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDN---IEFSEGLPGTKYDFYLYYTNSTVH 77
L+ D+ +Y+ ++ P + + + + + I +E PG Y+ +Y S V
Sbjct: 343 LAWDSLGAATEYVVSYQPAGPGGSQLQQRVPGDWSTITITELEPGVAYNVSIYAVISDVL 402
Query: 78 DWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRII 137
T +TT P L + T ++ W P S + G+++ I + + +I
Sbjct: 403 SSPV-TTKVTTNLATPQGLKFKTITETTVEVQWEP-FSFPFDGWEISFIPKNNEGG--VI 458
Query: 138 GFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET 197
+ ++ L PG Y V + ++ D S S + +T + P + +V ++T
Sbjct: 459 AQLPSTVTTFNQTGLKPGEEYTVTVVALKDQARSPP-ASDSISTLIDGPTQILVRDVSDT 517
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
V W P K + + + ++ PP +Q + + L PG Y+++
Sbjct: 518 VAFVEWTPPRARVDAILLKYGLADGEGGRTTFRLQ----PP-LSQYSLQALRPGARYHLA 572
Query: 258 VQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
V + S P AQ+ T P + S T SL + W+ + +E Y+V +
Sbjct: 573 VSALRGANESQPALAQFTTEIDAPKNLRV--GSRTPASLELTWDNSE--AEAHSYRVVYS 628
Query: 318 VRRPGASSTPITKSRDE-PTQCDMSEGLEPGRTYQVLVKTV 357
G + RD PT L PG Y + + V
Sbjct: 629 TLA-GEHYHEVLVPRDTGPTTRATLADLVPGTEYGIGISAV 668
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 55/215 (25%), Positives = 91/215 (42%)
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT-TKPNTPGKFIVWFRNETTLLVLWQ-P 205
+L +L PG Y + + + ++S+ T FT +P T F +++ + W P
Sbjct: 739 TLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLHFSQL--TSSSVNITWSDP 796
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
S PA ++ P D E+ + +G A+ GL P Y +S+ V
Sbjct: 797 SPPAD---RLVLTYSPRDE-EAPQQLALDGTR---RHASLTGLRPSTEYLVSLVAVHGAV 849
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASS 325
S P T T P +IT +S+ + W PP + FD Y++S S
Sbjct: 850 SSEPVTGSITTGMDAPKDLRV--GNITQDSMVIYWSPP--VAPFDHYRISYRAAEGRTDS 905
Query: 326 TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
T I ++ T+ M L+P Y++ VK+V G+
Sbjct: 906 TAIG---NDATEYIMRL-LQPATKYEIGVKSVRGR 936
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 58/248 (23%), Positives = 99/248 (39%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGK 117
GL P T+Y L + V T SITT D P +L V + + I+WSPP++
Sbjct: 831 GLRPSTEYLVSLVAVHGAVSSEPV-TGSITTGMDAPKDLRVGNITQDSMVIYWSPPVA-P 888
Query: 118 YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSR 177
+ +++ + +T IG N Y ++ L P Y++ + SV +ES +
Sbjct: 889 FDHYRISYRAAEGRTDSTAIG---NDATEYIMRLLQPATKYEIGVKSVRGREESEVASIT 945
Query: 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
+T + P T L+ W P P Y V + E++L V+ +
Sbjct: 946 TYTAM-DAPLGVTATNITPTEALLQWNP--PLMDVESY-VLVLTRHTGETIL-VDGINQ- 999
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLR 297
+ L P Y +++ + S + + T+ P + T + +T S
Sbjct: 1000 ----EYQLTNLQPSTTYTVAMYATNGPLTSQTISTNFTTLLDPPTNLT--ASEVTRRSAL 1053
Query: 298 VVWEPPKG 305
+ W PP G
Sbjct: 1054 LSWVPPVG 1061
>UNIPROTKB|E1BFE2 [details] [associations]
symbol:E1BFE2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0001525 "angiogenesis" evidence=IEA] [GO:0004725
"protein tyrosine phosphatase activity" evidence=IEA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0001525 InterPro:IPR000772 SUPFAM:SSF50370
PROSITE:PS50231 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00700000104166 OMA:FTVNCSW EMBL:DAAA02013198
EMBL:DAAA02013199 EMBL:DAAA02013200 EMBL:DAAA02013201
EMBL:DAAA02013202 IPI:IPI01002356 Ensembl:ENSBTAT00000020345
Uniprot:E1BFE2
Length = 2286
Score = 200 (75.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 77/310 (24%), Positives = 133/310 (42%)
Query: 55 EFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI 114
+F + PG KY + + + T T P TNL + S + W+P
Sbjct: 1336 KFEDLTPGKKYKIQILTVSGGLFSKEAQTEGRTVPA-AVTNLRITENSTRHLSFSWTPS- 1393
Query: 115 SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD--SKESV 172
G+ + + + + + R + + +S ++L G Y++ + + S ES
Sbjct: 1394 EGELNSYNIFLYNPDRTLKDRAL--VDPQVQSFSFQNLLQGRMYRMVIVTHSGELSNESF 1451
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYV 231
+ T N G +N T +L W P+ P + Y++ + P+ + +
Sbjct: 1452 IFGRTVPATVSNLKGSN----QNMTDSLWFSWSPA-PGD-FDFYELILYNPNGTKKENWK 1505
Query: 232 EKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLRPLSFTYDKA 289
+K+ Q F GLVPGR Y + V T S D +S T + RT P P ++ A
Sbjct: 1506 DKD-----LTQWRFHGLVPGRKYTLCVITHSGD-LSNKATGESRTDIAPSPPSLMSF--A 1557
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+T+ SL + W+ P ++++D +++ R P + + E + GL PGR+
Sbjct: 1558 DVTNTSLAITWKGPPDWTDYDDFELQWFPRDAITVFNPYSNRKSEGR---IVHGLRPGRS 1614
Query: 350 YQVLVKTVSG 359
YQ VKTVSG
Sbjct: 1615 YQFSVKTVSG 1624
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 85/310 (27%), Positives = 129/310 (41%)
Query: 55 EFSEGLPGTKYDFYLYYTNSTVHDWLTW--TASITTPPDPPTNLSVNVR-SGKTAQIFWS 111
+F + PG Y T S V L+ TA T P +L N S K+ + WS
Sbjct: 629 QFKDLAPGRLYQV----TVSCVSGELSAHRTAVGRTVPQKVGDLEANSNGSTKSLVVSWS 684
Query: 112 PPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD--LTPGGSYQVQLFSVYDSK 169
PP +G + +++ + + S +G E Y + D L PG Y++++ +S
Sbjct: 685 PP-AGDWEQYRILLWNDSSVLLNITVGKEETH---YVIDDVGLIPGRRYEIEV--TVESG 738
Query: 170 ESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVL 229
T T P V NET+L V+WQ PA+ + Y VS+ D +L
Sbjct: 739 NLKNSTRCQGRTVPLAVLHLRVKHANETSLSVMWQT--PAAEWERYIVSLIDRD----LL 792
Query: 230 YVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKA 289
++ K P + F LVPGR Y +V ++S D + + + RT+P +
Sbjct: 793 FIHKL-LPRDAREFTFTNLVPGRKYIATVTSISGD-LKNSSLTKGRTVPAQVTGLRVANQ 850
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
T+NSL W G EF YQV + + ++ T L+ G
Sbjct: 851 G-TTNSLFTNWTQALGDVEF--YQVLLIHENVVIKNESVSSE----TSGYSFHSLKSGSL 903
Query: 350 YQVLVKTVSG 359
Y V+V TVSG
Sbjct: 904 YSVVVTTVSG 913
Score = 157 (60.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 58/217 (26%), Positives = 95/217 (43%)
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
+GYS L G Y V + +V S T + G + L + W
Sbjct: 891 SGYSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSGRSDYLSISWL 950
Query: 205 PSYPASIYTHYKVSIDPPD-APESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
P+ P + + Y V++ +S++ + GE +F L PGR YN+++ T S
Sbjct: 951 PA-PGDVDS-YVVTLSHDGRVVQSLVIAKSVGE------CSFSSLTPGRLYNVTITTRS- 1001
Query: 264 DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGA 323
+ + + +Q RT+P + + S S+ L+V W G +FD Y+V+I +
Sbjct: 1002 GKYESHSFSQERTVPNKVQGVSISN-SARSDYLKVSWVHASG--DFDHYEVTIKNKNNFI 1058
Query: 324 SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+ + KS +E C + L PGR Y V V T SG+
Sbjct: 1059 QTKSVPKSENE---CIFVK-LVPGRLYSVTVSTKSGQ 1091
Score = 154 (59.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 70/298 (23%), Positives = 117/298 (39%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
G KY+ + + + T P P ++ V ++ I WS SG +
Sbjct: 462 GNKYNIAITAVSGDKRSSTMYANGSTVVPSPVKDIGVLAKTNSLL-ISWSRG-SGNVERY 519
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+L ++ + T Y+ LTPG Y V + S ++ + S TT
Sbjct: 520 QLMLMDKGILVHSIAVDTTF-----YTFHGLTPGHLYNVTIVSEAAGLQNYKWKSAR-TT 573
Query: 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241
+ T+L V WQ P+ Y +++ + + +
Sbjct: 574 PMEVSNLKVTNEGTMTSLKVKWQR--PSGNVDFYNITLSYQGTIKQSRTLASQ-----IT 626
Query: 242 QAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWE 301
++ FK L PGR Y ++V VS E+S TA RT+P + + T SL V W
Sbjct: 627 ESQFKDLAPGRLYQVTVSCVS-GELSAHRTAVGRTVPQKVGDLEANSNGSTK-SLVVSWS 684
Query: 302 PPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
PP G ++++Y++ + + IT ++E GL PGR Y++ V SG
Sbjct: 685 PPAG--DWEQYRILL--WNDSSVLLNITVGKEETHYVIDDVGLIPGRRYEIEVTVESG 738
Score = 141 (54.7 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 71/277 (25%), Positives = 112/277 (40%)
Query: 88 TPPDPPTNLSVNVRSGKT--AQIFWSPPISGKYSGFKLKVISLSEKTPPRII-GFTENPP 144
T P + ++VN SG++ I W P G + V++LS R++
Sbjct: 926 TVPSSVSGVTVN-NSGRSDYLSISWLPA-PGDVDSY---VVTLSHDG--RVVQSLVIAKS 978
Query: 145 AGY-SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPN-TPGKFIVWFRNETTLLVL 202
G S LTPG Y V + + ES +++ T PN G I L V
Sbjct: 979 VGECSFSSLTPGRLYNVTITTRSGKYESHSFSQER--TVPNKVQGVSISNSARSDYLKVS 1036
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W + + + HY+V+I + +++ + P + F LVPGR Y+++V T S
Sbjct: 1037 WV--HASGDFDHYEVTIKNKNN-----FIQTKSVPKSENECIFVKLVPGRLYSVTVSTKS 1089
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
+ RTIP T S + L V W G + D+Y++ +
Sbjct: 1090 -GQYEASEQGNGRTIPEAVKDLTLKNRS--TEDLWVTWTRADG--DVDQYEIQLLFN--D 1142
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
P T+ + L PGR Y++LV T+SG
Sbjct: 1143 MKVFPPFHLVSTATEYRFTS-LTPGRKYKILVLTISG 1178
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 60/264 (22%), Positives = 105/264 (39%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIF-WSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
T + T P PP V+ T + W P SGK + ++++++ ++K I E
Sbjct: 390 TMVLQTDPLPPARFEVSKEKTTTTSLHVWWTPSSGKVTWYEVQLLDDNQKIQTAQI--QE 447
Query: 142 NPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
Y+ +LT G Y + + +V K S + T P+ P K I +LL
Sbjct: 448 RASRNEYTFFNLTAGNKYNIAITAVSGDKRSSTMYANGSTVVPS-PVKDIGVLAKTNSLL 506
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W ++ + + +D S+ V+ F GL PG YN+++
Sbjct: 507 ISWSRG-SGNVERYQLMLMDKGILVHSIA-VDT-------TFYTFHGLTPGHLYNVTI-- 555
Query: 261 VSEDE-ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
VSE + RT P+ + T SL+V W+ P G +F Y ++++ +
Sbjct: 556 VSEAAGLQNYKWKSARTTPMEVSNLKVTNEG-TMTSLKVKWQRPSGNVDF--YNITLSYQ 612
Query: 320 RPGASSTPITKSRDEPTQCDMSEG 343
S + E D++ G
Sbjct: 613 GTIKQSRTLASQITESQFKDLAPG 636
>RGD|2624 [details] [associations]
symbol:Fn1 "fibronectin 1" species:10116 "Rattus norvegicus"
[GO:0001503 "ossification" evidence=TAS] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001775 "cell activation" evidence=IMP] [GO:0002020
"protease binding" evidence=IPI] [GO:0002931 "response to ischemia"
evidence=IEP] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005577 "fibrinogen complex" evidence=ISO]
[GO:0005578 "proteinaceous extracellular matrix" evidence=ISO;TAS]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005793 "endoplasmic
reticulum-Golgi intermediate compartment" evidence=ISO] [GO:0006953
"acute-phase response" evidence=IEA] [GO:0007044 "cell-substrate
junction assembly" evidence=ISO] [GO:0007155 "cell adhesion"
evidence=ISO] [GO:0007160 "cell-matrix adhesion" evidence=ISO;IMP]
[GO:0007161 "calcium-independent cell-matrix adhesion" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA] [GO:0008347 "glial cell
migration" evidence=IDA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0010193 "response to ozone" evidence=IEP] [GO:0010952 "positive
regulation of peptidase activity" evidence=ISO] [GO:0016324 "apical
plasma membrane" evidence=ISO] [GO:0016504 "peptidase activator
activity" evidence=ISO] [GO:0018149 "peptide cross-linking"
evidence=ISO] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0030335 "positive regulation of cell migration"
evidence=IMP] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=ISO] [GO:0035924 "cellular response to vascular endothelial
growth factor stimulus" evidence=IEP] [GO:0036120 "cellular response
to platelet-derived growth factor stimulus" evidence=IEP] [GO:0042060
"wound healing" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0045340 "mercury ion binding"
evidence=IDA] [GO:0050921 "positive regulation of chemotaxis"
evidence=IDA] [GO:0051384 "response to glucocorticoid stimulus"
evidence=IEP] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEP] [GO:0071288 "cellular response to mercury ion"
evidence=IDA] [GO:0071333 "cellular response to glucose stimulus"
evidence=IEP] [GO:0071347 "cellular response to interleukin-1"
evidence=IMP] [GO:0071380 "cellular response to prostaglandin E
stimulus" evidence=IEP] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEP] [GO:0071773
"cellular response to BMP stimulus" evidence=IEP] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060 RGD:2624
GO:GO:0043066 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0008360
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0006953 GO:GO:0005577
GO:GO:0030198 GO:GO:0008201 GO:GO:0016504 GO:GO:0001525
PROSITE:PS00022 GO:GO:0007160 eggNOG:NOG12793 GO:GO:0042060
GO:GO:0034446 GO:GO:0005604 GO:GO:0005793 GO:GO:0001503 GO:GO:0018149
InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GO:GO:0005201 HOGENOM:HOG000234344 HOVERGEN:HBG005731
GO:GO:0007044 OrthoDB:EOG4W3SM1 GO:GO:0045340 GO:GO:0007161
EMBL:X15906 EMBL:L29191 EMBL:L00191 EMBL:M11750 EMBL:X05831
EMBL:X05832 EMBL:X05833 EMBL:X05834 IPI:IPI00200757 IPI:IPI00231982
IPI:IPI00231983 IPI:IPI00231984 PIR:S14428 UniGene:Rn.1604
ProteinModelPortal:P04937 SMR:P04937 IntAct:P04937 MINT:MINT-5024668
STRING:P04937 PhosphoSite:P04937 PRIDE:P04937 UCSC:RGD:2624
InParanoid:P04937 ArrayExpress:P04937 Genevestigator:P04937
GermOnline:ENSRNOG00000014288 Uniprot:P04937
Length = 2477
Score = 200 (75.5 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 87/353 (24%), Positives = 138/353 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G V + + F PG +Y+ +Y
Sbjct: 1190 LTVSWERSTTPDITGYRITTTPTNGQQGTALEEVVHADQSSCTFENRNPGLEYNVSVYTV 1249
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1250 KD---DKESAPISDTVIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1306
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1307 GIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1364
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P SI T+ V P E V E P A L+
Sbjct: 1365 FTNIGPDTMRVTWAP--PPSIELTNLLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLL 1419
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG--FS 307
PG Y +SV +V E S P + +T P F D + +T+NS V W P+
Sbjct: 1420 PGTEYLVSVSSVYEQHESIPLRGRQKTGLDSPTGF--DSSDVTANSFTVHWVAPRAPITG 1477
Query: 308 EFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ + RP P SR+ T + L PG Y V + V+G+
Sbjct: 1478 YIIRHHAEHSAGRPRQDRVP--PSRNSITLTN----LNPGTEYIVTIIAVNGR 1524
Score = 197 (74.4 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 88/347 (25%), Positives = 143/347 (41%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 742 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGKQS 799
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 800 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 857
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT---PGKFIVWFRN 195
E + +L DL PG Y + +++V +++ES + + T P + P + F
Sbjct: 858 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDDVPAPKDLQFVE 916
Query: 196 ETTLLV--LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ-AAFKGLVPGR 252
T + V +W P P S T Y+V + P + P + P A GL PG
Sbjct: 917 VTDVKVTIMWTP--PNSAVTGYRVDVLPVNLPGE----HGQRLPVNRNTFAEVTGLSPGV 970
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y V V + S P TAQ T P + + + T ++ V W PP+ + Y
Sbjct: 971 TYLFKVFAVHQGRESKPLTAQQTTKLDAPTNLQF--VNETDRTVLVTWTPPR--ARIAGY 1026
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++++ + R G P + L+PG Y V + V G
Sbjct: 1027 RLTVGLTRGGQ---PKQYNVGPMASKYPLRNLQPGSEYTVTLMAVKG 1070
Score = 196 (74.1 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 89/339 (26%), Positives = 144/339 (42%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSE--GL-PGTKYDFYLYYTNSTVHDWLTWTA 84
YR+D +P + P + N F+E GL PG Y F ++ + + TA
Sbjct: 936 YRVDVLPVN---LPGEHGQRLPVNRNT-FAEVTGLSPGVTYLFKVFAVHQG-RESKPLTA 990
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
TT D PTNL + +T + W+PP + +G++L V L+ P+ + P
Sbjct: 991 QQTTKLDAPTNLQFVNETDRTVLVTWTPP-RARIAGYRLTV-GLTRGGQPK--QYNVGPM 1046
Query: 145 AG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE---TTLL 200
A Y L++L PG Y V L +V +++S T FTT P + I + E TT++
Sbjct: 1047 ASKYPLRNLQPGSEYTVTLMAVKGNQQSPKATGV-FTTLQ--PLRSIPPYNTEVTETTIV 1103
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W P+ P +K+ + P E+ V + GL PG Y ++Q
Sbjct: 1104 ITWTPA-PR---IGFKLGVRPSQGGEAPREVTSDS-----GSIVVSGLTPGVEYTYTIQV 1154
Query: 261 VSE-DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ + E P + T PL P + + +A+ + L V WE + Y+++
Sbjct: 1155 LRDGQERDAPIVNRVVT-PLSPPTNLHLEANPDTGVLTVSWERSTT-PDITGYRITTTPT 1212
Query: 320 RPGASSTPITKS-RDEPTQCDMSEGLEPGRTYQVLVKTV 357
G T + + + + C E PG Y V V TV
Sbjct: 1213 N-GQQGTALEEVVHADQSSCTF-ENRNPGLEYNVSVYTV 1249
Score = 183 (69.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 76/315 (24%), Positives = 134/315 (42%)
Query: 51 KDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFW 110
+++I + PGT+Y + N + +T D P +L V + + I W
Sbjct: 1500 RNSITLTNLNPGTEYIVTIIAVNGR-EESPPLIGQQSTVSDVPRDLEVIASTPTSLLISW 1558
Query: 111 SPP-ISGKYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSVY-- 166
PP +S +Y +++ +P + FT + ++ ++ PG Y + L++V
Sbjct: 1559 EPPAVSVRY--YRITYGETGGNSP--VQEFTVPGSKSTATINNIKPGADYTITLYAVTGR 1614
Query: 167 -DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
DS S S N+ T+ + P + V + ++ V W PS S T Y+V+ AP
Sbjct: 1615 GDSPASSKPVSINYQTEIDKPSQMQVTDVQDNSISVRWLPS--TSPVTGYRVTT----AP 1668
Query: 226 ESVLYVEK-EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSF 284
++ L K + P + +GL P Y +SV + + S P T RP
Sbjct: 1669 KNGLGPTKSQTVSPDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGL 1728
Query: 285 TYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGL 344
+ + +S+++ WE P+G + +Y+V+ + G DE T ++ GL
Sbjct: 1729 AFTDVDV--DSIKIAWESPQG--QVSRYRVTYSSPEDGIHELFPAPDGDEDT-AEL-HGL 1782
Query: 345 EPGRTYQVLVKTVSG 359
PG Y V V + G
Sbjct: 1783 RPGSEYTVSVVALHG 1797
Score = 180 (68.4 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 75/296 (25%), Positives = 126/296 (42%)
Query: 63 TKYDFYLYYTNSTVHDWLTW-TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
T++DF + + +T TA + P T+ SV + + + W S SGF
Sbjct: 693 TRFDFTTSASTPVTSNTVTGETAPFS--PVVATSESVTEITASSFVVSWVSA-SDTVSGF 749
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+++ E P+ + + ++ DL PG Y V ++ + + + S + TT
Sbjct: 750 RVEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGKQSLILSTSQTT 808
Query: 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241
P+ P V ++T+++V W S P + T Y++ P SV E P A
Sbjct: 809 APDAPPDPTVDQVDDTSIVVRW--SRPQAPITGYRIVYSP-----SVEGSSTELNLPETA 861
Query: 242 QAA-FKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSNS 295
+ L PG YNI++ V E++ STP Q T +P P +T
Sbjct: 862 NSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRSDDVPAPKDLQFVEVTDVK 921
Query: 296 LRVVWEPPKGFSEFDKYQVSI-NVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTY 350
+ ++W PP S Y+V + V PG + +R+ T +++ GL PG TY
Sbjct: 922 VTIMWTPPN--SAVTGYRVDVLPVNLPGEHGQRLPVNRN--TFAEVT-GLSPGVTY 972
Score = 165 (63.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 85/347 (24%), Positives = 142/347 (40%)
Query: 15 IKIP-ENLSSDNSTYRLDYI-PAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYY 71
IKI E+ S YR+ Y P G + + + D ++ GL PG++Y +
Sbjct: 1738 IKIAWESPQGQVSRYRVTYSSPEDGI---HELFPAPDGDEDTAELHGLRPGSEYTVSVVA 1794
Query: 72 TNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK 131
+ + T P PTNL S T W+ P S K +G++++V EK
Sbjct: 1795 LHGGMESQPLIGVQSTAIP-APTNLKFTQVSPTTLTAQWTAP-SVKLTGYRVRVTP-KEK 1851
Query: 132 TPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PGK 188
T P + I + + + + L Y+V ++++ D+ S TT N P +
Sbjct: 1852 TGPMKEINLSPDSTS-VIVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPRR 1909
Query: 189 FIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL 248
V ETT+ + W+ T ++V P + V + P GL
Sbjct: 1910 ARVTDATETTITISWRTK--TETITGFQVDAIPANGQTPV----QRTISPDVRSYTITGL 1963
Query: 249 VPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSE 308
PG Y I + T++++ S+P T P + + + T NSL V W+ P+ +
Sbjct: 1964 QPGTDYKIHLYTLNDNARSSPVVIDASTAIDAPSNLRF--LTTTPNSLLVSWQAPR--AR 2019
Query: 309 FDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
Y I +PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 2020 ITGY--IIKYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIYV 2063
Score = 155 (59.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 71/305 (23%), Positives = 120/305 (39%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 1326 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNIGPDTMRVTWAPPPSI 1383
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ + ++ + + + + + A L +L PG Y V + SVY+ ES+
Sbjct: 1384 ELTNLLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYLVSVSSVYEQHESIPLRG 1442
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE 236
R T ++P F + V W P + T Y + A S ++
Sbjct: 1443 RQ-KTGLDSPTGFDSSDVTANSFTVHWVA--PRAPITGYIIR---HHAEHSAGRPRQDRV 1496
Query: 237 PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
PP L PG Y +++ V+ E S P Q T+ P + + T SL
Sbjct: 1497 PPSRNSITLTNLNPGTEYIVTIIAVNGREESPPLIGQQSTVSDVPRDL--EVIASTPTSL 1554
Query: 297 RVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVK 355
+ WEPP + Y+++ G +S P+ + ++ + ++PG Y + +
Sbjct: 1555 LISWEPPAVSVRY--YRITYG--ETGGNS-PVQEFTVPGSKSTATINNIKPGADYTITLY 1609
Query: 356 TVSGK 360
V+G+
Sbjct: 1610 AVTGR 1614
Score = 153 (58.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 62/258 (24%), Positives = 103/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P +S D ++ S + TKY+ +Y T+ +T
Sbjct: 1842 YRVRVTPKEKTGPMKEINLSPD-STSVIVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 1899
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ I + +TP + T +P
Sbjct: 1900 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQTP---VQRTISPDV 1955
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 1956 RSYTITGLQPGTDYKIHLYTLNDNARSSPVVI-DASTAIDAPSNLRFLTTTPNSLLVSWQ 2014
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 2015 A--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIYVIALKNN 2069
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 2070 QKSEPLIGRKKTDELPQL 2087
Score = 146 (56.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 70/268 (26%), Positives = 105/268 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PP N V + T I W+P GFKL V PR + T + +
Sbjct: 1091 PPYNTEV---TETTIVITWTP---APRIGFKLGVRPSQGGEAPREV--TSDS-GSIVVSG 1141
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL-VLWQPSYPAS 210
LTPG Y + + D +E A T + P + +T +L V W+ S
Sbjct: 1142 LTPGVEYTYTIQVLRDGQERDAPIVNRVVTPLSPPTNLHLEANPDTGVLTVSWERSTTPD 1201
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
I T Y+++ P + + +E + F+ PG YN+SV TV +D+ S P
Sbjct: 1202 I-TGYRITTTPTNGQQGTAL--EEVVHADQSSCTFENRNPGLEYNVSVYTVKDDKESAPI 1258
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ IP P IT +S+ + W P S Y++++ G PI +
Sbjct: 1259 SDT--VIPEVPQLTDLSFVDITDSSIGLRWTPLNS-STIIGYRITVVAAGEGI---PIFE 1312
Query: 331 SR-DEPTQCDMSEGLEPGRTYQVLVKTV 357
D GLEPG Y + V T+
Sbjct: 1313 DFVDSSVGYYTVTGLEPGIDYDISVITL 1340
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 75/338 (22%), Positives = 121/338 (35%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW-LTWTA 84
YR+ P +G P + VS D E + EGL P +Y +Y N L TA
Sbjct: 1662 YRVTTAPKNGLGPTKSQTVS---PDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTA 1718
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P L+ + +I W P G+ S +++ S E + +
Sbjct: 1719 --VTNIDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRV-TYSSPEDGIHELFPAPDGDE 1774
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
L L PG Y V + +++ ES T P P + TTL W
Sbjct: 1775 DTAELHGLRPGSEYTVSVVALHGGMESQPLIGVQSTAIP-APTNLKFTQVSPTTLTAQW- 1832
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
+ P+ T Y+V + P + + + P GL+ Y +SV + +
Sbjct: 1833 -TAPSVKLTGYRVRVTPKEKTGPMKEINLS---PDSTSVIVSGLMVATKYEVSVYALKDT 1888
Query: 265 EISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
S P T+ P R T T ++ + W +QV
Sbjct: 1889 LTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQVDAI--- 1939
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P TP+ ++ + GL+PG Y++ + T++
Sbjct: 1940 PANGQTPVQRTISPDVRSYTITGLQPGTDYKIHLYTLN 1977
>UNIPROTKB|H0Y7Z1 [details] [associations]
symbol:FN1 "Ugl-Y3" species:9606 "Homo sapiens" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
EMBL:AC012462 HGNC:HGNC:3778 ChiTaRS:FN1 EMBL:AC073284
ProteinModelPortal:H0Y7Z1 Ensembl:ENST00000456923 Bgee:H0Y7Z1
Uniprot:H0Y7Z1
Length = 1103
Score = 195 (73.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 85/339 (25%), Positives = 144/339 (42%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGL-PGTKYDFYLYYTNSTVHDW 79
SS + YR+ P +G P P T + D E + EGL P +Y +Y N +
Sbjct: 373 SSPVTGYRVTTTPKNG-PGPTKTKTAGP--DQTEMTIEGLQPTVEYVVSVYAQNPSGESQ 429
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPP-RIIG 138
++TT P PT+L + + W+PP + + +G++++V EKT P + I
Sbjct: 430 PLVQTAVTTIP-APTDLKFTQVTPTSLSAQWTPP-NVQLTGYRVRVTP-KEKTGPMKEIN 486
Query: 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT--PGKFIVWFRNE 196
+ + + L Y+V ++++ D+ S TT N P + V E
Sbjct: 487 LAPDS-SSVVVSGLMVATKYEVSVYALKDTLTSRP-AQGVVTTLENVSPPRRARVTDATE 544
Query: 197 TTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256
TT+ + W+ T ++V P + + K P GL PG Y I
Sbjct: 545 TTITISWRTK--TETITGFQVDAVPANGQTPIQRTIK----PDVRSYTITGLQPGTDYKI 598
Query: 257 SVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSI 316
+ T++++ S+P T P + + + T NSL V W+PP+ + Y I
Sbjct: 599 YLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPR--ARITGY--II 652
Query: 317 NVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLV 354
+PG+ + + R T+ ++ GLEPG Y + V
Sbjct: 653 KYEKPGSPPREVVPRPRPGVTEATIT-GLEPGTEYTIYV 690
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 67/256 (26%), Positives = 105/256 (41%)
Query: 110 WSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169
W+P S G+++ V++ E P F ++ Y++ L PG Y + + ++ +
Sbjct: 3 WTPLNSSTIIGYRITVVAAGEGIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGG 61
Query: 170 ESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESV 228
ES T T P P T+ V W P P SI T++ V P E V
Sbjct: 62 ESAPTTLTQQTAVP-PPTDLRFTNIGPDTMRVTWAP--PPSIDLTNFLVRYSPVKNEEDV 118
Query: 229 LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDK 288
E P A L+PG Y +SV +V E STP + +T P D
Sbjct: 119 --AELSISPSDNA-VVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGI--DF 173
Query: 289 ASITSNSLRVVWEPPKGFSEFDKYQVSINVR----RPGASSTPITKSRDEPTQCDMSEGL 344
+ IT+NS V W P+ + Y++ + RP P SR+ T +++
Sbjct: 174 SDITANSFTVHWIAPR--ATITGYRIRHHPEHFSGRPREDRVP--HSRNSITLTNLT--- 226
Query: 345 EPGRTYQVLVKTVSGK 360
PG Y V + ++G+
Sbjct: 227 -PGTEYVVSIVALNGR 241
Score = 158 (60.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 62/258 (24%), Positives = 103/258 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ P P ++ D ++ S + TKY+ +Y T+ +T
Sbjct: 469 YRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA-QGVVT 526
Query: 88 TPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T + PP V + T I W +GF++ + + +TP I T P
Sbjct: 527 TLENVSPPRRARVTDATETTITISWRTKTE-TITGFQVDAVPANGQTP---IQRTIKPDV 582
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
Y++ L PG Y++ L+++ D+ S + +T + P +LLV WQ
Sbjct: 583 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQ 641
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P + T Y + + P +P + PG +A GL PG Y I V + +
Sbjct: 642 P--PRARITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIYVIALKNN 696
Query: 265 EISTPTTAQYRTIPLRPL 282
+ S P + +T L L
Sbjct: 697 QKSEPLIGRKKTDELPQL 714
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 73/308 (23%), Positives = 121/308 (39%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+PP S
Sbjct: 43 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNIGPDTMRVTWAPPPSI 100
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ F ++ + + + + + A L +L PG Y V + SVY+ ES
Sbjct: 101 DLTNFLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYVVSVSSVYEQHESTPLRG 159
Query: 177 RNFTTKPNTPGKFIVWFRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
R T + G + F + T + V W P + T Y++ PE +E
Sbjct: 160 RQKTGLDSPTG---IDFSDITANSFTVHWIA--PRATITGYRIR----HHPEHFSGRPRE 210
Query: 235 GEPPGPAQA-AFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
P + L PG Y +S+ ++ E S Q T+ P + + T
Sbjct: 211 DRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDL--EVVAATP 268
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQV 352
SL + W+ P + Y+++ G +S P+ + ++ + GL+PG Y +
Sbjct: 269 TSLLISWDAPAVTVRY--YRITYG--ETGGNS-PVQEFTVPGSKSTATISGLKPGVDYTI 323
Query: 353 LVKTVSGK 360
V V+G+
Sbjct: 324 TVYAVTGR 331
Score = 120 (47.3 bits), Expect = 0.00079, P = 0.00079
Identities = 77/344 (22%), Positives = 123/344 (35%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY-YTNSTVHDWLTWTASI 86
YR+ Y G+ P V K S PG Y +Y T + SI
Sbjct: 285 YRITYGETGGNSPVQEFTVPGS-KSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISI 343
Query: 87 T--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
T D P+ + V + + W P S +G++ ++ + K P G T+
Sbjct: 344 NYRTEIDKPSQMQVTDVQDNSISVKWLPS-SSPVTGYR---VTTTPKNGP---GPTKTKT 396
Query: 145 AG-----YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPN-TPGKFIVWFRNETT 198
AG +++ L P Y V +++ S ES TT P T KF T+
Sbjct: 397 AGPDQTEMTIEGLQPTVEYVVSVYAQNPSGESQPLVQTAVTTIPAPTDLKFTQV--TPTS 454
Query: 199 LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
L W P P T Y+V + P + + + P + GL+ Y +SV
Sbjct: 455 LSAQWTP--PNVQLTGYRVRVTPKEKTGPMKEINLA---PDSSSVVVSGLMVATKYEVSV 509
Query: 259 QTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+ + S P T+ P R T T ++ + W +QV
Sbjct: 510 YALKDTLTSRPAQGVVTTLENVSPPRRARVT----DATETTITISWRTKT--ETITGFQV 563
Query: 315 SINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P TPI ++ + GL+PG Y++ + T++
Sbjct: 564 DAV---PANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLN 604
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGLEPGRTYQVLVKT 356
+ W P F + +Y +S + G P+ + T ++ GL G TY V+V+
Sbjct: 838 ISWAP---FQDTSEYIISCHP--VGTDEEPLQFRVPGTSTSATLT-GLTRGATYNVIVEA 891
Query: 357 V 357
+
Sbjct: 892 L 892
>ZFIN|ZDB-GENE-030131-6545 [details] [associations]
symbol:fn1b "fibronectin 1b" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IGI;IMP] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060
ZFIN:ZDB-GENE-030131-6545 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0001756 eggNOG:NOG12793
InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS51092
HOVERGEN:HBG005731 EMBL:AY725818 IPI:IPI00860329 UniGene:Dr.24233
ProteinModelPortal:Q58XP5 SMR:Q58XP5 InParanoid:Q58XP5
ArrayExpress:Q58XP5 Uniprot:Q58XP5
Length = 2500
Score = 198 (74.8 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 88/305 (28%), Positives = 132/305 (43%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG 120
PGT Y F++Y + V +T PD PT+L + +A + WS P + +G
Sbjct: 971 PGTLYRFHIYAVSGGVESE-PLIGEKSTKPDAPTDLRFTDITDDSALVIWSFP-RAQVTG 1028
Query: 121 FKLKVISLSEKTPP--RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN 178
++L IS+ +P RI G Y L +L P Y+V L S + S T
Sbjct: 1029 YRL-FISIGSSSPKQLRIPGHKSQ----YKLPNLQPDTEYRVTLHSEQGNTLSEGITDTF 1083
Query: 179 FTTKP--NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE 236
TT+P N P +F +T ++V W P S Y++S+ P + E+ +E E
Sbjct: 1084 RTTQPTGNAP-RFNTEV-TDTAIIVTWIPVAKFS----YRMSVKPSQSGET----PRE-E 1132
Query: 237 PPGPAQAAFKGLVPGRAYNISVQTV-SEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
G + GL PG Y +Q + S + +P T + T P + S+ +
Sbjct: 1133 TSGSGRIYISGLTPGLEYIYGLQPLFSGRKHGSPITNKVVTSLSPPTDLNVEPNSV-NGE 1191
Query: 296 LRVVWEPPKGFSEFDKYQVS---INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
L V W K + Y+V+ IN +R G S + DE T C + E L PG Y +
Sbjct: 1192 LNVRWRGTKS-PDITGYRVTGTPINGQR-GVSLEESVRG-DE-TSCIL-ENLSPGVDYNI 1246
Query: 353 LVKTV 357
V TV
Sbjct: 1247 SVYTV 1251
Score = 197 (74.4 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 87/344 (25%), Positives = 141/344 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYV-SRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86
YRL Y P G + +R+ + + P T+Y ++Y +S + L T +
Sbjct: 1484 YRLRYQPTSGGRAKDERLPPTRNYFTLVNLA---PETEYTVHIYAVSSNIES-LPLTGTQ 1539
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFW-SPPISGKYSGFKLKVISLSEKTPPRIIGFT-ENPP 144
T D PT+L+V + + I W +P ++ +Y +K+ E+ PR FT
Sbjct: 1540 ATVSDAPTDLAVTSSTPTSITISWDAPAVTVRY--YKITHGETGERDAPR--EFTVPGTQ 1595
Query: 145 AGYSLKDLTPGGSYQVQLFSVY---DSKES---VAYTSRNFTTKPNTPGKFIVWFRNETT 198
+ +++ L P Y + L++V DS S V T R +P V + T
Sbjct: 1596 SSATIQGLRPDTDYTITLYAVTGRGDSPASSTPVIITHRTAGGSIASPSDLDVTDIQDNT 1655
Query: 199 LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
L V W P+ T Y+V+ P + + E G P + GLVP Y I+V
Sbjct: 1656 LTVRWTPA--RGPITGYRVT-GTPKGGQGPTFSELVG--PERTEMTIHGLVPTVEYTINV 1710
Query: 259 QTVSEDEISTPTTAQYRTI-PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
+S++ STP + T +P T+ + S S+ V W P+ Y+V +
Sbjct: 1711 VALSQEGESTPVVQKATTTNEQKPKDLTF--TDVDSTSMLVKWNVPR-VPGVTSYRVLYS 1767
Query: 318 VRRPGASS-TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
G P RD + +GL PG Y + V + G+
Sbjct: 1768 SPEEGEREYQPALSGRDNSV---LLQGLNPGTMYIIKVIPMKGR 1808
Score = 180 (68.4 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 74/315 (23%), Positives = 131/315 (41%)
Query: 53 NIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSP 112
++ + LPG +Y+ +Y N L T + TT PD PTN V+ + I WS
Sbjct: 774 SVNIQDLLPGRRYNVDVYEVNPEGDTKLILTTTQTTAPDAPTNHEVSNVQETSIVIRWSK 833
Query: 113 PISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV 172
P +G+++ E + +I E + +L DL PG SY + ++SV D+ ES
Sbjct: 834 P-KAPITGYRVVYTPSVEGSSTELI-LPETQTS-VTLGDLRPGLSYNISIYSVEDNLESE 890
Query: 173 AYTSRNFTTKPNTPGKF-----IVWFR-NETTLLVLWQPSYPASIYTHYKVSIDPPDAPE 226
+ T P + + ++ + + + W + P + + Y+V+ P
Sbjct: 891 PLVLQASTAGEQQPEEIQAPTDLQFYEVTDVKITITW--TGPPNEVSGYRVTFAPVSTDG 948
Query: 227 SVLYVEKEGEPPGP--AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSF 284
++ + P A A L PG Y + VS S P + T P P
Sbjct: 949 QA---QRPLQLPVTHNAYAELMRLQPGTLYRFHIYAVSGGVESEPLIGEKSTKPDAPTDL 1005
Query: 285 TYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGL 344
+ IT +S V+W P+ ++ Y++ I++ G+SS + +Q + L
Sbjct: 1006 RF--TDITDDSALVIWSFPR--AQVTGYRLFISI---GSSSPKQLRIPGHKSQYKLPN-L 1057
Query: 345 EPGRTYQVLVKTVSG 359
+P Y+V + + G
Sbjct: 1058 QPDTEYRVTLHSEQG 1072
Score = 144 (55.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 71/312 (22%), Positives = 118/312 (37%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPD----P-PTNLSVNVRSGKTAQIFWSP 112
GL PG YD + STV D S+ T P PTNL ++ + + W+
Sbjct: 1328 GLEPGINYDISV----STVTDEAESVPSVITQQTQTAVPAPTNLYISEVGADSMHVSWTA 1383
Query: 113 PI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE 170
P + S F ++ + + + + L++L P Y V++ VYD +E
Sbjct: 1384 PSVQPSEISRFVIRYHPTNNDDDTQEVN-VGGGTTSFVLQNLLPNTEYLVKVVCVYDDRE 1442
Query: 171 SVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLY 230
S T TK ++P + + V W P ++ T Y++ P +
Sbjct: 1443 SEPVTGIQ-KTKLDSPTNLDFSDVSTNSFTVHWMA--PRAVITGYRLRYQPTSGGRA--- 1496
Query: 231 VEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKAS 290
+ E PP L P Y + + VS + S P T T+ P S
Sbjct: 1497 -KDERLPPTRNYFTLVNLAPETEYTVHIYAVSSNIESLPLTGTQATVSDAPTDLAV--TS 1553
Query: 291 ITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEP-TQCDMS-EGLEPGR 348
T S+ + W+ P + Y+++ G P + P TQ + +GL P
Sbjct: 1554 STPTSITISWDAPAVTVRY--YKITHG--ETGERDAP--REFTVPGTQSSATIQGLRPDT 1607
Query: 349 TYQVLVKTVSGK 360
Y + + V+G+
Sbjct: 1608 DYTITLYAVTGR 1619
Score = 143 (55.4 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 64/281 (22%), Positives = 112/281 (39%)
Query: 27 TYRLDYIPAH-GHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLTWTA 84
+YR+ P+ G P T S I + GL PG +Y + L S T
Sbjct: 1115 SYRMSVKPSQSGETPREETSGSGRI-----YISGLTPGLEYIYGLQPLFSGRKHGSPITN 1169
Query: 85 SITTPPDPPTNLSVNVRS-GKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
+ T PPT+L+V S + W S +G+++ ++ + +
Sbjct: 1170 KVVTSLSPPTDLNVEPNSVNGELNVRWRGTKSPDITGYRVTGTPINGQRGVSLEESVRGD 1229
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
L++L+PG Y + +++V + ES ++ P V F +TT+ + W
Sbjct: 1230 ETSCILENLSPGVDYNISVYTVKNHLESEPISTSVTQDVPKVGDLSFVDF-TDTTIGIRW 1288
Query: 204 QP-SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
P +Y A H V + P + ++ +GL PG Y+ISV TV+
Sbjct: 1289 TPLNYQAVTGYHITVVTSGQNFP-----ILEDVVNSSVNYYTIRGLEPGINYDISVSTVT 1343
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPP 303
++ S P+ +T P + + ++S+ V W P
Sbjct: 1344 DEAESVPSVITQQTQTAVPAPTNLYISEVGADSMHVSWTAP 1384
>MGI|MGI:88448 [details] [associations]
symbol:Col12a1 "collagen, type XII, alpha 1" species:10090
"Mus musculus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0005595 "collagen type
XII" evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0070062
"extracellular vesicular exosome" evidence=ISO] InterPro:IPR002035
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 MGI:MGI:88448
GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 PROSITE:PS50025 SMART:SM00210
HOGENOM:HOG000111877 HOVERGEN:HBG051060 GO:GO:0005595 EMBL:U25652
EMBL:AC157477 EMBL:AC166055 EMBL:U57095 IPI:IPI00121430
IPI:IPI00230527 IPI:IPI00319976 IPI:IPI00776316 IPI:IPI00830892
PIR:C44479 PIR:D44479 UniGene:Mm.3819 ProteinModelPortal:Q60847
SMR:Q60847 STRING:Q60847 PhosphoSite:Q60847 PaxDb:Q60847
PRIDE:Q60847 Ensembl:ENSMUST00000071750 UCSC:uc009qut.1
GeneTree:ENSGT00700000104243 InParanoid:Q60847 Bgee:Q60847
CleanEx:MM_COL12A1 Genevestigator:Q60847
GermOnline:ENSMUSG00000032332 Uniprot:Q60847
Length = 3120
Score = 196 (74.1 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 71/259 (27%), Positives = 107/259 (41%)
Query: 85 SITTPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
S+ P D PTNL ++ R+ ++ ++ W+PP S +K++ +S +
Sbjct: 1378 SVKGPGDLEAPTNLVISERTHRSFRVSWTPP-SDSVDRYKVEYYPVSGGKRQEF--YVSR 1434
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
LKDL P Y V ++SV + + S T P ++ TT+ V
Sbjct: 1435 LDTSTVLKDLKPETDYVVNVYSVVEDEYSEPLKGTE-KTLPVPVVSLNIYDVGPTTMHVQ 1493
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
WQP A+ YT VS P +PE E P GL+P Y ++VQ V
Sbjct: 1494 WQPVGGATGYT---VSYQPTRSPEGTKPKEMRVGPT-VNDVQLTGLLPNTEYEVTVQAVL 1549
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
D S P A+ T+PL P +T +++ VVWEP G + KY V
Sbjct: 1550 YDLTSEPAKAREVTLPL-PRPQDVKLRDVTHSTMNVVWEPVLG--KVRKYIVRYKTPDEE 1606
Query: 323 ASSTPITKSRDEPTQCDMS 341
+ +SR D+S
Sbjct: 1607 FKEVEVDRSRASTILKDLS 1625
Score = 163 (62.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 91/347 (26%), Positives = 144/347 (41%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYL--YYTNSTVHDW 79
+SD S YR+ + P G+P T ++ D ++ + F P T Y+ + Y + + +
Sbjct: 1679 ASDVSLYRITWAPV-GNPDKMETILNGD-ENTLVFENLNPNTPYEVSITAIYPDESESED 1736
Query: 80 LTWTAS------ITT--PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVI-SLSE 130
L+ T +TT P P NL V + + + W P SG+ +++ S E
Sbjct: 1737 LSGTERTLRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPA-SGRVQKYRITYQPSTGE 1795
Query: 131 KTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP-NTPGK 188
I +G +N LK TP Y + ++S Y E T R TKP NT
Sbjct: 1796 GNEQTITVGGRQNSVLLQKLKPDTP---YTITVYSQYPDGEGGRMTGRG-KTKPLNTVRN 1851
Query: 189 FIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA-PESVLYVEKEGEPPGPAQAAFKG 247
V+ + ++L V W + YK+ P PE ++ + P A +
Sbjct: 1852 LRVYDPSTSSLSVRWD--HAEGNPRQYKLFYAPTSGGPEELVPI-----PGNTNYAILRN 1904
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFS 307
L P Y I+V V + T+ RT+ +R L+ + T NSL V W+P G
Sbjct: 1905 LQPDTPYTITVVPVYTEGDGGRTSDTGRTL-VRGLARNIQVYNPTPNSLDVRWDPAPG-- 1961
Query: 308 EFDKYQVSINVRRPGASSTPITKSRDEP--TQCDMSEGLEPGRTYQV 352
+Y++ V P A + P ++S P T+ E L P Y V
Sbjct: 1962 PVQQYRI---VYSPVAGTRP-SESIVVPGNTRTVHLERLIPDTPYSV 2004
Score = 145 (56.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 78/346 (22%), Positives = 136/346 (39%)
Query: 28 YRLDYIPAHGHP--PPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTAS 85
Y + Y P P V + D ++ + LP T+Y+ + + ++D + A
Sbjct: 1503 YTVSYQPTRSPEGTKPKEMRVGPTVND-VQLTGLLPNTEYEVTV---QAVLYDLTSEPAK 1558
Query: 86 ---ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE- 141
+T P P ++ + + T + W P + GK + ++ KTP E
Sbjct: 1559 AREVTLPLPRPQDVKLRDVTHSTMNVVWEP-VLGKVRKYIVRY-----KTPDEEFKEVEV 1612
Query: 142 -NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
A LKDL+ Y V + +VYD S T+ + T + P +
Sbjct: 1613 DRSRASTILKDLSSQTQYTVSVSAVYDEGTSPPATAYDTTRRVPAPTNLQFTEVTPESFR 1672
Query: 201 VLWQPSYPASIYTHYKVSIDP---PDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
W + AS + Y+++ P PD E++L ++ F+ L P Y +S
Sbjct: 1673 GTWD--HGASDVSLYRITWAPVGNPDKMETILNGDEN-------TLVFENLNPNTPYEVS 1723
Query: 258 VQTVSEDEI-STPTTAQYRTIPLRPLSFTYDKA--------SITSNSLRVVWEPPKGFSE 308
+ + DE S + RT+ L PL+ K+ + TSNSL V W+P G
Sbjct: 1724 ITAIYPDESESEDLSGTERTLRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPASG--R 1781
Query: 309 FDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
KY+++ + IT + + + + L+P Y + V
Sbjct: 1782 VQKYRITYQPSTGEGNEQTITVGGRQNSV--LLQKLKPDTPYTITV 1825
Score = 127 (49.8 bits), Expect = 0.00043, P = 0.00043
Identities = 88/338 (26%), Positives = 136/338 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYL--YYTNSTVHDWLTWTAS 85
Y + Y PA G T V D + + GT+YD + Y S + L+ S
Sbjct: 844 YLVTYTPAAGGETQEVT-VRGDTTTTM-LRKLKEGTQYDLSVTALYA-SGAGEALSGKGS 900
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFW-SPPISGKYSGFKLKVISLSEKTPPRIIGFTENP- 143
P NL + + +W S P G G+++ SL + G T P
Sbjct: 901 TLEERGSPQNLVTKDITDTSIGAYWTSAP--GMVRGYRVSWKSLYDDIEA---GETTLPG 955
Query: 144 PAGYSL-KDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI-VWFRNETTLLV 201
A +++ ++L P Y++ +F+ Y S E T + TT+ + K + V E T+ V
Sbjct: 956 DAIHTMIENLQPETKYKISVFATYSSGEGEPVTG-DATTELSQDSKILRVDEETEHTMRV 1014
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
W+ + P + +Y+V P + V K PP K L P Y+I+V +
Sbjct: 1015 TWKAA-PGKV-VNYRVVYRPQGGGRQM--VAKV--PPTVTSTVLKRLQPQTTYDITVLPM 1068
Query: 262 ---SEDEI--STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSI 316
E ++ + TTA P R L T D T +S RV WEP G E Y+V+
Sbjct: 1069 YKTGEGKLRQGSGTTASRFKSP-RNLK-TSDP---TMSSFRVTWEPAPG--EVKGYKVTF 1121
Query: 317 NVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
+ + + T + E L G TY+V V
Sbjct: 1122 HPTGDDRRLGELVLGPYDNTV--VLEELRAGTTYRVNV 1157
Score = 124 (48.7 bits), Expect = 0.00091, P = 0.00091
Identities = 72/331 (21%), Positives = 123/331 (37%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ Y P G P + V + + + +P T Y + S + + T
Sbjct: 1966 YRIVYSPVAGTRPSESIVVPGNTR-TVHLERLIPDTPYSVNIVALYSDGEGNPSPSQGRT 2024
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
P P N+ V + + + W G +++ + S + P I +T P
Sbjct: 2025 LPRSGPRNIRVFGETTNSLSVAWDHA-DGPVQQYRI-IYSPTVGDP--IDEYTTVPGRRN 2080
Query: 148 S--LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
+ L+ L P Y++ + ++Y+ + T T P ++ T V W P
Sbjct: 2081 NVILQPLQPDTPYKITVIAIYEDGDGGHLTGNGRTVGLLPPQNIHIFDEWYTRFRVSWDP 2140
Query: 206 SYPASIYTHYKVSIDPPDAPESV-LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
S P+ + YK+ P + E + +V GE L P Y++SV +
Sbjct: 2141 S-PSPVLG-YKIVYKPVGSNEPMEAFV---GEV---TSYTLHNLNPSTTYDVSVYAQYDS 2192
Query: 265 EISTPTTAQYRTIPLRPLSF-TYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGA 323
+S P T Q T+ L TY + ++ V W P + + Y++ ++ G
Sbjct: 2193 GLSVPLTDQGTTLYLNVTDLKTYQ---VGWDTFCVKWSPHRAATS---YRLKLSPA-DGT 2245
Query: 324 SSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
IT E + C GL P Y V V
Sbjct: 2246 RGQEITVRGSETSHC--FTGLSPEAEYGVTV 2274
>ZFIN|ZDB-GENE-030804-1 [details] [associations]
symbol:tnr "tenascin R (restrictin, janusin)"
species:7955 "Danio rerio" [GO:0007411 "axon guidance"
evidence=IDA] InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
INTERPRO:IPR020837 ZFIN:ZDB-GENE-030804-1 GO:GO:0007411
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF12661 HOVERGEN:HBG008949
KO:K06252 CTD:7143 HSSP:Q9U8W8 EMBL:AY286489 IPI:IPI00511824
RefSeq:NP_919364.1 UniGene:Dr.88831 ProteinModelPortal:Q7T3T6
SMR:Q7T3T6 STRING:Q7T3T6 GeneID:369191 KEGG:dre:369191
InParanoid:Q7T3T6 NextBio:20813342 ArrayExpress:Q7T3T6
Uniprot:Q7T3T6
Length = 1350
Score = 199 (75.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 88/305 (28%), Positives = 126/305 (41%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGK 117
GL PG +Y L L TA++TT D P L V S A + WSPP K
Sbjct: 468 GLKPGEEYTVNLVALKDQGRS-LPVTATVTTLIDGPIQLIVRDISDTVAFVEWSPP-KAK 525
Query: 118 YSGFKLKVISLSEKTPPRIIGFTENPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
L+ + + P F P YSL+ L PG +Y+V + V + ES S
Sbjct: 526 VDQIILRYGLVGVEGPKTT--FRLQPTLSQYSLQVLRPGSTYEVSVSGVRNGTES-GVIS 582
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKV-SIDPPDAPESVLYVEKEG 235
FTT+ + P V + +L + W S A + + V S D + V+ +G
Sbjct: 583 TEFTTEIDAPKNLRVLSKTSISLELEWDNS-EADVEGYSVVYSTLAGDQYDKVIVPRNDG 641
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
P + L+PG Y I + V STP T RT PL T AS T N+
Sbjct: 642 --PS-TKTTLNELMPGTEYGIGISAVLGANQSTPATMNARTGLDVPLDLTVT-AS-TDNT 696
Query: 296 LRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVK 355
+ ++W +G D Y+V+ +T +T +D T S L+PG Y + V
Sbjct: 697 ITLLWGTVQG--PIDHYRVTYT--SSSGVTTELTVPKDVTTTTLTS--LQPGTEYTITVA 750
Query: 356 TVSGK 360
G+
Sbjct: 751 AQRGR 755
Score = 154 (59.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 76/285 (26%), Positives = 117/285 (41%)
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWS-PPISGKYSGFKLKVISLSEKTPPRIIGFT 140
+T T PP NL V S T + W P I Y +I+ E T P +
Sbjct: 313 YTGDDCTSVLPPMNLRVRGVSENTIDLQWEGPAILTDY------LITY-EPTTPGGVQLE 365
Query: 141 ENPPAGYS---LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN-- 195
P + +K L PG Y V +++V D+ S + T N G + F++
Sbjct: 366 MRVPGNVTNITIKGLNPGLEYNVNVYAVIDNIISSPMNTLVSTYLSNPDG---LLFKSIM 422
Query: 196 ETTLLVLWQP-SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK-GLVPGRA 253
ET++ V WQP Y ++ +++S P D + + P + + GL PG
Sbjct: 423 ETSVEVQWQPLDY---LFDGWEISFIPKDNDGGMT-----AQLPSTITSFHQTGLKPGEE 474
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
Y +++ + + S P TA T+ P+ I+ V W PPK ++ D Q
Sbjct: 475 YTVNLVALKDQGRSLPVTATVTTLIDGPIQLIV--RDISDTVAFVEWSPPK--AKVD--Q 528
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTV 357
+ + G P T R +PT S + L PG TY+V V V
Sbjct: 529 IILRYGLVGVEG-PKTTFRLQPTLSQYSLQVLRPGSTYEVSVSGV 572
Score = 144 (55.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 81/353 (22%), Positives = 146/353 (41%)
Query: 21 LSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSE-GLPGTKYDFYLY-------YT 72
+SSD+ T PA PP + ++ +D+ E SE L G+K L YT
Sbjct: 780 VSSDSLTVAWSS-PA---PPADAFILNYSAQDSSEDSEIALDGSKTRITLTGLMPSRRYT 835
Query: 73 NS--TVHDWLTW---TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVIS 127
+ T+H +T S+ T DPP +++V + ++ I W P++ +++ S
Sbjct: 836 ATLVTMHGNVTSKPVVGSVNTGMDPPRDITVLYVTEESVTITWIQPLA-LLDYYRMSYQS 894
Query: 128 LSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPG 187
+ +I N Y+L L P Y+++L +V S+ES T+ FT + P
Sbjct: 895 SKGRMDSVVIDSDIN---NYTLTSLHPATEYEIKLNAVRGSQESKVITTTVFTAI-DMPA 950
Query: 188 KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG 247
+ L+ W P PAS +Y +++ VE + +Q
Sbjct: 951 ELTALNVTPQGALLRWNP--PASSVDNYVLTVTRNQVTADTFLVEGNKQEYQLSQ----- 1003
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPL-RPLSFTYDKASITSNSLRVVWEPPKGF 306
L+P Y++++ ++ +++ T P+ P + T + I S + W+PP
Sbjct: 1004 LIPSTTYSVALYA-TKGPLTSGTVISNFVTPMDAPQNLT--ASEINHRSALISWQPP--I 1058
Query: 307 SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++ D Y ++ G+ I + D T + EGL Y V ++ G
Sbjct: 1059 ADIDNYMLTYKAA-DGSRKELILDAED--TWIRL-EGLAETTEYTVRLQVARG 1107
Score = 38 (18.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 29 RLDYIPAHGH 38
RLD++P GH
Sbjct: 164 RLDFVPQCGH 173
>UNIPROTKB|P24821 [details] [associations]
symbol:TNC "Tenascin" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005614 "interstitial matrix"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IEA] [GO:0060739
"mesenchymal-epithelial cell signaling involved in prostate gland
development" evidence=IEA] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IEA] [GO:0045545 "syndecan binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0005615
"extracellular space" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] InterPro:IPR000742 InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060
SMART:SM00181 EMBL:M55618 INTERPRO:IPR002181 Reactome:REACT_111102
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009611 GO:GO:0008284 GO:GO:0007528 SUPFAM:SSF49265
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
GO:GO:0010628 eggNOG:NOG12793 GO:GO:0005604 GO:GO:0060740
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0014012 GO:GO:0005614
InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661 HOVERGEN:HBG008949
OrthoDB:EOG4MSCX9 EMBL:X56160 EMBL:X78565 EMBL:AL162425 EMBL:X80280
EMBL:M24630 IPI:IPI00031008 IPI:IPI00220211 IPI:IPI00220213
IPI:IPI00220214 IPI:IPI00220216 IPI:IPI01015608 PIR:I38337
RefSeq:NP_002151.2 UniGene:Hs.143250 UniGene:Hs.734766 PDB:1TEN
PDB:2RB8 PDB:2RBL PDBsum:1TEN PDBsum:2RB8 PDBsum:2RBL
ProteinModelPortal:P24821 SMR:P24821 STRING:P24821
PhosphoSite:P24821 DMDM:281185495 PaxDb:P24821 PRIDE:P24821
Ensembl:ENST00000340094 Ensembl:ENST00000345230
Ensembl:ENST00000346706 Ensembl:ENST00000350763
Ensembl:ENST00000535648 Ensembl:ENST00000537320 GeneID:3371
KEGG:hsa:3371 UCSC:uc004bjj.4 CTD:3371 GeneCards:GC09M117782
HGNC:HGNC:5318 HPA:CAB004592 HPA:HPA004823 MIM:187380
neXtProt:NX_P24821 PharmGKB:PA35103 InParanoid:P24821 KO:K06252
OMA:GQRSCPN PhylomeDB:P24821 EvolutionaryTrace:P24821
GenomeRNAi:3371 NextBio:13334 ArrayExpress:P24821 Bgee:P24821
CleanEx:HS_TNC Genevestigator:P24821 GermOnline:ENSG00000041982
GO:GO:0060739 Uniprot:P24821
Length = 2201
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 80/305 (26%), Positives = 128/305 (41%)
Query: 59 GL-PGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG +Y+ L+ N+T L TT D P+ + V + TA I W P++
Sbjct: 772 GLAPGQEYEISLHIVKNNTRGPGLKRVT--TTRLDAPSQIEVKDVTDTTALITWFKPLA- 828
Query: 117 KYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYT 175
+ G +L + + R I TE+ YS+ +L P Y+V L S S
Sbjct: 829 EIDGIEL-TYGIKDVPGDRTTIDLTEDENQ-YSIGNLKPDTEYEVSLISRRGDMSSNP-A 885
Query: 176 SRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEG 235
FTT + P + + ++ + W+ A+I + Y++ P + V+
Sbjct: 886 KETFTTGLDAPRNLRRVSQTDNSITLEWRNG-KAAIDS-YRIKYAPISGGDHA-EVDVPK 942
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
+ GL PG Y I V V ED+ S P T T P + + TS
Sbjct: 943 SQQATTKTTLTGLRPGTEYGIGVSAVKEDKESNPATINAATELDTPKDLQVSETAETS-- 1000
Query: 296 LRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVK 355
L ++W+ P ++FD+Y+ +N P + R+ T + GLEPG+ Y VL+
Sbjct: 1001 LTLLWKTP--LAKFDRYR--LNYSLPTGQWVGVQLPRN--TTSYVLRGLEPGQEYNVLLT 1054
Query: 356 TVSGK 360
G+
Sbjct: 1055 AEKGR 1059
Score = 139 (54.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 76/345 (22%), Positives = 129/345 (37%)
Query: 20 NLSSDN----STYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNST 75
NL+ DN + Y + Y P H V D I E PG +Y F +
Sbjct: 640 NLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTI-IQELEPGVEY-FIRVFAILE 697
Query: 76 VHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR 135
+ +A + T P L + ++ W P + + +++ +++++
Sbjct: 698 NKKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDP-LDIAFETWEIIFRNMNKEDEGE 756
Query: 136 IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN 195
I P Y L PG Y++ L V ++ R TT+ + P + V
Sbjct: 757 ITKSLRRPETSYRQTGLAPGQEYEISLHIVKNNTRGPGL-KRVTTTRLDAPSQIEVKDVT 815
Query: 196 ETTLLVLW-QPSYPAS-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
+TT L+ W +P I Y + D P ++ E E Q + L P
Sbjct: 816 DTTALITWFKPLAEIDGIELTYGIK-DVPGDRTTIDLTEDEN------QYSIGNLKPDTE 868
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
Y +S+ + D S P + T P + + S T NS+ + W G + D Y+
Sbjct: 869 YEVSLISRRGDMSSNPAKETFTTGLDAPRNLR--RVSQTDNSITLEWR--NGKAAIDSYR 924
Query: 314 VSINVRRPGA-SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ G + + KS+ T+ ++ GL PG Y + V V
Sbjct: 925 IKYAPISGGDHAEVDVPKSQQATTKTTLT-GLRPGTEYGIGVSAV 968
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 59/254 (23%), Positives = 98/254 (38%)
Query: 27 TYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86
++R+ Y+P G P T K + +PG +Y + + + S
Sbjct: 1739 SFRITYVPITGGTPSMVTVDGT--KTQTRLVKLIPGVEYLVSIIAMKG-FEESEPVSGSF 1795
Query: 87 TTPPDPPTNL-SVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
TT D P+ L + N+ + A W P I+ S VIS + + P I
Sbjct: 1796 TTALDGPSGLVTANITDSE-ALARWQPAIATVDS----YVISYTGEKVPEITRTVSGNTV 1850
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
Y+L DL P Y +++F+ ++S T++ FTT ++P T L+ W+P
Sbjct: 1851 EYALTDLEPATEYTLRIFAEKGPQKSSTITAK-FTTDLDSPRDLTATEVQSETALLTWRP 1909
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
P + T Y + + D + V G P + L P Y +Q ++
Sbjct: 1910 --PRASVTGYLLVYESVDGTVKEVIV---G--PDTTSYSLADLSPSTHYTAKIQALNGPL 1962
Query: 266 ISTPTTAQYRTIPL 279
S + TI L
Sbjct: 1963 RSNMIQTIFTTIGL 1976
>UNIPROTKB|Q02388 [details] [associations]
symbol:COL7A1 "Collagen alpha-1(VII) chain" species:9606
"Homo sapiens" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005590 "collagen type VII"
evidence=TAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 Reactome:REACT_118779
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867 SUPFAM:SSF49265
GO:GO:0030198 GO:GO:0007155 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0005788 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0008544 GO:GO:0005604
EMBL:L23982 EMBL:L02870 EMBL:D13694 EMBL:M96984 EMBL:S51236
EMBL:M65158 EMBL:L06862 IPI:IPI00025418 IPI:IPI00795118 PIR:A54849
RefSeq:NP_000085.1 UniGene:Hs.476218 ProteinModelPortal:Q02388
SMR:Q02388 IntAct:Q02388 MINT:MINT-1390694 STRING:Q02388
MEROPS:I02.967 PhosphoSite:Q02388 DMDM:1345650 PaxDb:Q02388
PRIDE:Q02388 Ensembl:ENST00000328333 Ensembl:ENST00000454817
GeneID:1294 KEGG:hsa:1294 UCSC:uc003ctz.2 CTD:1294
GeneCards:GC03M048576 HGNC:HGNC:2214 HPA:CAB016357 MIM:120120
MIM:131705 MIM:131750 MIM:131850 MIM:132000 MIM:226600 MIM:604129
MIM:607523 neXtProt:NX_Q02388 Orphanet:158673 Orphanet:79407
Orphanet:216989 Orphanet:79408 Orphanet:89842 Orphanet:89841
Orphanet:79409 Orphanet:89839 Orphanet:158676 Orphanet:79410
Orphanet:89843 Orphanet:79411 PharmGKB:PA26730 HOGENOM:HOG000111866
HOVERGEN:HBG051053 InParanoid:Q02388 KO:K16628 OMA:RRVCTTA
OrthoDB:EOG4J117P PhylomeDB:Q02388 ChiTaRS:COL7A1 GenomeRNAi:1294
NextBio:5251 ArrayExpress:Q02388 Bgee:Q02388 CleanEx:HS_COL7A1
Genevestigator:Q02388 GermOnline:ENSG00000114270 GO:GO:0005590
Uniprot:Q02388
Length = 2944
Score = 194 (73.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 92/349 (26%), Positives = 145/349 (41%)
Query: 20 NLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHD 78
NL + YRL++ G PP + D+ + +GL PGT+Y LY T H+
Sbjct: 436 NLVPEARGYRLEWRRETGLEPPQKVVLPSDVT-RYQL-DGLQPGTEYRLTLY-TLLEGHE 492
Query: 79 WLTWTASITTPPD----PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPP 134
T + T P+ P T+L G+ ++ WSP + G + ++I S +
Sbjct: 493 VATPATVVPTGPELPVSPVTDLQATELPGQRVRVSWSP-VPG---ATQYRIIVRSTQGVE 548
Query: 135 RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE---SVAYTSRNFTTKPNTPGKFIV 191
R + + A + L D+ G SY V++ + +E SV R T PG +V
Sbjct: 549 RTLVLPGSQTA-FDLDDVQAGLSYTVRVSARVGPREGSASVLTVRREPETPLAVPGLRVV 607
Query: 192 WFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
+ T + V W P AS +++S PES + PP GL PG
Sbjct: 608 -VSDATRVRVAWGPVPGAS---GFRISWSTGSGPES-----SQTLPPDSTATDITGLQPG 658
Query: 252 RAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDK 311
Y ++V + E RT PL P+ T +S+S+ + W G +
Sbjct: 659 TTYQVAVSVLRGREEGPAAVIVARTDPLGPVR-TVHVTQASSSSVTITWTRVPGATG--- 714
Query: 312 YQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKT-VSG 359
Y+VS + G + + E T ++ +GLEP Y V V+ V+G
Sbjct: 715 YRVSWHSAH-GPEKSQLVSG--EATVAEL-DGLEPDTEYTVHVRAHVAG 759
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 70/284 (24%), Positives = 124/284 (43%)
Query: 86 ITTPPDP----PTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
+T PPD P +L ++ S ++ ++ W+ SG +G+K++ L+ P E
Sbjct: 224 VTRPPDDSTSAPRDLVLSEPSSQSLRVQWTAA-SGPVTGYKVQYTPLTGLGQPLPSERQE 282
Query: 142 -NPPAGYS---LKDLTPGGSYQVQLFSVYDSK--ESVAYTSRNFTTKPNTPGKFIVWFRN 195
N PAG + L+ L P YQV + ++Y + E+V+ T+R TT P I +N
Sbjct: 283 VNVPAGETSVRLRGLRPLTEYQVTVIALYANSIGEAVSGTAR--TTALEGPELTI---QN 337
Query: 196 ET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
T +LLV W+ S P + T Y+V+ + +++ PG + L PG
Sbjct: 338 TTAHSLLVAWR-SVPGA--TGYRVTWRVLSGGPT----QQQELGPGQGSVLLRDLEPGTD 390
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
Y ++V T+ + T+ RT + T + S+ + W E Y+
Sbjct: 391 YEVTVSTLFGRSVGPATSLMARTDA--SVEQTLRPVILGPTSILLSWNL---VPEARGYR 445
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ R G + T+ + +GL+PG Y++ + T+
Sbjct: 446 LEWR-RETGLEPPQKVVLPSDVTRYQL-DGLQPGTEYRLTLYTL 487
>UNIPROTKB|Q29116 [details] [associations]
symbol:TNC "Tenascin" species:9823 "Sus scrofa" [GO:0031012
"extracellular matrix" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
INTERPRO:IPR002181 GO:GO:0007165 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 InterPro:IPR013111 Pfam:PF07974
Pfam:PF12661 HOVERGEN:HBG008949 OrthoDB:EOG4MSCX9 CTD:3371
KO:K06252 HOGENOM:HOG000234355 EMBL:X61599 PIR:S19694
RefSeq:NP_999395.1 UniGene:Ssc.16209 ProteinModelPortal:Q29116
SMR:Q29116 STRING:Q29116 GeneID:397460 KEGG:ssc:397460
Uniprot:Q29116
Length = 1746
Score = 190 (71.9 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 77/305 (25%), Positives = 124/305 (40%)
Query: 59 GL-PGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG +Y+ L+ N+T L TT D P+ + + TA I W P++
Sbjct: 772 GLAPGQEYEISLHIVKNNTRGPGLKRVT--TTRLDAPSQIEAKDVTDTTALITWFKPLA- 828
Query: 117 KYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYT 175
+ G +L + + R I T YS+ +L P Y+V L S S
Sbjct: 829 EIDGIEL-TYGIKDVPGDRTTIDLTHEENQ-YSIGNLKPDTEYEVSLISRRADMSSNP-A 885
Query: 176 SRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEG 235
FTT + P + + ++ + W+ A+ Y++ P + VE
Sbjct: 886 KETFTTGLDAPRNLRRISQTDNSITLEWRNGKAAA--DTYRIKYAPISGGDHA-EVEVPR 942
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
P +A GL PG Y I V V D+ S P T T P F + + +S
Sbjct: 943 SPQTTTKATLTGLRPGTEYGIGVSAVKGDKESDPATINAATDLDPPKDFRVSE--LKESS 1000
Query: 296 LRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVK 355
L ++W P ++FD+Y+ +N P + R+ + + GLEPG+ Y +L+
Sbjct: 1001 LTLLWRTP--LAKFDRYR--LNYGLPSGQPVEVQLPRNATSY--ILRGLEPGQEYTILLT 1054
Query: 356 TVSGK 360
G+
Sbjct: 1055 AEKGR 1059
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 71/345 (20%), Positives = 128/345 (37%)
Query: 20 NLSSDN----STYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNST 75
NL+ DN + Y + Y P H V D + + E PG +Y F +
Sbjct: 640 NLAWDNEMRVTEYLIVYTPTHEDGLEMQFRVPGD-QTSTTIRELEPGVEY-FIRVFAILE 697
Query: 76 VHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR 135
+ +A + T P L + ++ W P + + +++ +++++
Sbjct: 698 NKKSIPVSARVATYLPTPEGLKFKSIKETSVEVEWDP-LDIAFETWEIIFRNMNKEDEGE 756
Query: 136 IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN 195
I P Y L PG Y++ L V ++ R TT+ + P +
Sbjct: 757 ITKSLRRPETTYRQTGLAPGQEYEISLHIVKNNTRGPGL-KRVTTTRLDAPSQIEAKDVT 815
Query: 196 ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
+TT L+ W P + +++ D P ++ E Q + L P Y
Sbjct: 816 DTTALITWFK--PLAEIDGIELTYGIKDVPGDRTTIDLTHEEN---QYSIGNLKPDTEYE 870
Query: 256 ISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
+S+ + D S P + T P + + S T NS+ + W G + D Y++
Sbjct: 871 VSLISRRADMSSNPAKETFTTGLDAPRNLR--RISQTDNSITLEWR--NGKAAADTYRIK 926
Query: 316 INVRRPGA-SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
G + + +S T+ ++ GL PG Y + V V G
Sbjct: 927 YAPISGGDHAEVEVPRSPQTTTKATLT-GLRPGTEYGIGVSAVKG 970
Score = 124 (48.7 bits), Expect = 0.00049, P = 0.00049
Identities = 58/254 (22%), Positives = 99/254 (38%)
Query: 27 TYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86
++R+ Y+P G P T K LPG +Y + + + ++
Sbjct: 1284 SFRITYVPITGGAPSVVTVDGT--KTQTRLLRLLPGVEYLVSVIAVKG-FEESEPVSGTL 1340
Query: 87 TTPPDPPTNL-SVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
TT D P+ L + N+ + A W P I+ + VIS + P I
Sbjct: 1341 TTALDGPSGLVTANITDSE-ALAMWQPAIA-PVDHY---VISYTGDRVPEITRTVSGNTV 1395
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
Y+L +L P Y +++F+ ++S T++ FTT ++P T L+ W+P
Sbjct: 1396 EYALTNLEPATEYTLRIFAEKGPQKSSTITTK-FTTDLDSPRDLTATEVQSETALLTWRP 1454
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
P + T Y + + D + V G P + GL P Y +Q ++
Sbjct: 1455 --PRASVTGYLLVYESVDGTLKEVVV---G--PETTSYSLSGLSPSTHYTARIQALNGPL 1507
Query: 266 ISTPTTAQYRTIPL 279
S + + TI L
Sbjct: 1508 RSKMSQTVFTTIGL 1521
>UNIPROTKB|F1MRZ6 [details] [associations]
symbol:TNC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060739 "mesenchymal-epithelial cell signaling
involved in prostate gland development" evidence=IEA] [GO:0045545
"syndecan binding" evidence=IEA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005614 "interstitial
matrix" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0008284 GO:GO:0007528 SUPFAM:SSF49265 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0010628 GO:GO:0005604
GO:GO:0060740 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 GO:GO:0014012 GO:GO:0005614
InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661 OMA:GQRSCPN
GO:GO:0060739 GeneTree:ENSGT00690000102056 EMBL:DAAA02024590
EMBL:DAAA02024591 EMBL:DAAA02024592 EMBL:DAAA02024593
IPI:IPI00694504 Ensembl:ENSBTAT00000000752 ArrayExpress:F1MRZ6
Uniprot:F1MRZ6
Length = 2231
Score = 190 (71.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 79/305 (25%), Positives = 123/305 (40%)
Query: 59 GL-PGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG +Y+ L+ N+T L TT D P+ + V + TA I WS P++
Sbjct: 802 GLAPGQEYEISLHIVKNNTRGPGLKRVT--TTRLDAPSQIEVKDVTDTTALITWSKPLA- 858
Query: 117 KYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYT 175
+ +L + + + R I T YS+ +L P Y+V L S S
Sbjct: 859 EIDSIEL-MYGIKDVPGDRTSIDLTHEENQ-YSIGNLKPDTEYEVALISRRADMSSNP-A 915
Query: 176 SRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEG 235
FTT + P + + ++ + W+ A+ Y++ P + VE
Sbjct: 916 KETFTTGLDAPRNLRRISQTDNSITLEWRNVKAAA--DSYRIKYAPISGGDHA-EVEVPR 972
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
+ GL PG Y I V V D+ S P T T P T S
Sbjct: 973 SQQTTTRTTLTGLRPGTEYGIGVSAVKGDKESDPATINAATELDTPKDLRISDP--TETS 1030
Query: 296 LRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVK 355
L +VW+ P ++FD+Y+ +N P + +RD T + GLEPG+ Y +L+
Sbjct: 1031 LTLVWQTP--VAKFDRYR--LNYSLPSGQPKEVQLTRD--TTSFVLRGLEPGQEYSILLT 1084
Query: 356 TVSGK 360
G+
Sbjct: 1085 AEKGR 1089
Score = 136 (52.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 74/347 (21%), Positives = 129/347 (37%)
Query: 20 NLSSDN----STYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNST 75
NL+ DN + Y + Y P H V D + + E PG +Y F +
Sbjct: 670 NLAWDNEMRVTEYLIVYTPTHEDGLEMQFRVPGD-QTSATIRELEPGVEY-FIRVFAILE 727
Query: 76 VHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR 135
+ +A + T P L + ++ W P + + +++ ++++
Sbjct: 728 NKKSIPVSARVATYLPTPEGLKFKSIKETSVEVEWDP-LDIAFETWEVIFRNMNKDDEEE 786
Query: 136 IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN 195
I P Y L PG Y++ L V ++ R TT+ + P + V
Sbjct: 787 ITKSLRRPETTYRQTGLAPGQEYEISLHIVKNNTRGPGL-KRVTTTRLDAPSQIEVKDVT 845
Query: 196 ETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
+TT L+ W SI Y + D P S+ +E Q + L P
Sbjct: 846 DTTALITWSKPLAEIDSIELMYGIK-DVPGDRTSIDLTHEEN------QYSIGNLKPDTE 898
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
Y +++ + D S P + T P + + S T NS+ + W K + D Y+
Sbjct: 899 YEVALISRRADMSSNPAKETFTTGLDAPRNLR--RISQTDNSITLEWRNVKAAA--DSYR 954
Query: 314 VSINVRRPGA-SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ G + + +S+ T+ ++ GL PG Y + V V G
Sbjct: 955 IKYAPISGGDHAEVEVPRSQQTTTRTTLT-GLRPGTEYGIGVSAVKG 1000
>UNIPROTKB|P11722 [details] [associations]
symbol:FN1 "Fibronectin" species:9031 "Gallus gallus"
[GO:0006953 "acute-phase response" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0016477
"cell migration" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039
Pfam:PF00041 PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091
SMART:SM00058 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016477 GO:GO:0008360 SUPFAM:SSF49265 GO:GO:0006953
GO:GO:0005578 GO:GO:0008201 GO:GO:0007155 eggNOG:NOG12793
GO:GO:0031012 HOGENOM:HOG000234344 HOVERGEN:HBG005731 EMBL:V00432
EMBL:U21327 EMBL:X06533 EMBL:M26186 EMBL:U20386 IPI:IPI00813146
PIR:A28512 PIR:A29355 PIR:S71465 UniGene:Gga.3994
ProteinModelPortal:P11722 SMR:P11722 STRING:P11722 Uniprot:P11722
Length = 1256
Score = 185 (70.2 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 75/313 (23%), Positives = 139/313 (44%)
Query: 51 KDNIEFSEGL-PGTKYDFYLYYTNSTVHDW-LTWTASITTPPDPPTNLSVNVRSGKTAQI 108
+D E GL PG++Y + + LT T S PP PTNL + + +
Sbjct: 653 EDTAEL-HGLRPGSEYTINIVAIYDDMESLPLTGTQSTAIPP--PTNLKFTQVTPTSLTV 709
Query: 109 FWSPPISGKYSGFKLKVISLSEKTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167
W+ P + + +G++++V + EKT P + I + + + + L Y+V ++++ D
Sbjct: 710 NWNAP-NVRLTGYRVRV-NPKEKTGPMKEINLSPDSTSAV-VSGLMVATKYEVSVYALKD 766
Query: 168 SKESVAYTSRNFTTKPNT--PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
S S TT N P + V ETT+ + W+ T +++ P +
Sbjct: 767 SLTSRP-AQGVVTTLENVSPPRRARVTDATETTITITWRTK--TETITGFQIDAIPAASG 823
Query: 226 ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFT 285
++ + + P GL PG Y I + T++E+ S+P T P +
Sbjct: 824 QNPI---QRTISPDVRTYTITGLQPGNDYKIYLYTLNENARSSPVVIDASTAIDAPSNLR 880
Query: 286 YDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGL 344
+ + T+NSL W+PP+ ++ Y + + +PG+ + + + R T+ ++ GL
Sbjct: 881 F--LTTTTNSLLASWQPPR--AKITGYIIRYD--KPGSPAKELLPRPRPGTTEATIT-GL 933
Query: 345 EPGRTYQVLVKTV 357
EPG Y + + V
Sbjct: 934 EPGTEYTIYIIAV 946
Score = 174 (66.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 80/344 (23%), Positives = 129/344 (37%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWL 80
SS + YR+ +P GH P T V D + + EGL P +Y +Y N L
Sbjct: 535 SSPVTGYRVTAVPKKGHGPTKTKNVPPD-QTQVTI-EGLQPTVEYMVSVYAQNQNGES-L 591
Query: 81 TWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFT 140
+ T D P L+ + +I W P G+ + +++ S E ++
Sbjct: 592 PLVETAVTNIDRPKGLTFTEVDVDSIKIAWESP-QGQVTRYRV-TYSSPEDGIHELLPAP 649
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT-KPNTPGKFIVWFRNETTL 199
L L PG Y + + ++YD ES+ T T P T KF T+L
Sbjct: 650 GGEEDTAELHGLRPGSEYTINIVAIYDDMESLPLTGTQSTAIPPPTNLKFTQV--TPTSL 707
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
V W P T Y+V ++P + + + P A GL+ Y +SV
Sbjct: 708 TVNWNA--PNVRLTGYRVRVNPKEKTGPMKEINLS---PDSTSAVVSGLMVATKYEVSVY 762
Query: 260 TVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
+ + S P T+ P R T T ++ + W +Q+
Sbjct: 763 ALKDSLTSRPAQGVVTTLENVSPPRRARVT----DATETTITITWRTKT--ETITGFQID 816
Query: 316 INVRRPGASS-TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P AS PI ++ + GL+PG Y++ + T++
Sbjct: 817 AI---PAASGQNPIQRTISPDVRTYTITGLQPGNDYKIYLYTLN 857
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 79/351 (22%), Positives = 137/351 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L++ + + S YR+ P +G V + + F PG +Y+ +Y
Sbjct: 69 LIVSWDRSTTPGISGYRVTTAPTNGQQGSTLEEVVGADQTSCTFENLNPGVEYNVSVYAV 128
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
+ + + +IT T+LS + + + W+P + G+++ V++ E
Sbjct: 129 KDD-QESIPISKTITQEVPQLTDLSFVDITDSSIGLRWTPLNASTIIGYRITVVAAGESV 187
Query: 133 PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW 192
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 188 PI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLRFT 245
Query: 193 FRNETTLLVLWQPSYPASIY-THYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
T+ V W + P SI + + V P E V + P L+PG
Sbjct: 246 NVGPDTMRVTW--TAPTSIVLSSFLVRYSPVKKEEDVAELTIS---PSDNVVVLTNLLPG 300
Query: 252 RAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG-FSEFD 310
Y + V +V+E S P + +T P D + IT+NS V W P+ + +
Sbjct: 301 TEYLVRVYSVAEQHESAPLSGIQKTGLDSPTGL--DFSDITANSFTVHWIAPRATITGYK 358
Query: 311 -KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ V RP P SR+ T + L PG Y V + V+G+
Sbjct: 359 IRHHPEHGVGRPKEDRVP--PSRNSITLTN----LLPGTEYVVSIIAVNGR 403
Score = 168 (64.2 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 79/307 (25%), Positives = 122/307 (39%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+ P S
Sbjct: 205 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNVGPDTMRVTWTAPTSI 262
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYS-LKDLTPGGSYQVQLFSVYDSKESVAYT 175
S F ++ + ++ + T +P L +L PG Y V+++SV + ES +
Sbjct: 263 VLSSFLVRYSPVKKEED--VAELTISPSDNVVVLTNLLPGTEYLVRVYSVAEQHESAPLS 320
Query: 176 SRNFTTKPNTPG-KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
T + G F N T V W P + T YK+ P V +++
Sbjct: 321 GIQKTGLDSPTGLDFSDITANSFT--VHWIA--PRATITGYKIRHHPE---HGVGRPKED 373
Query: 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSN 294
PP L+PG Y +S+ V+ E S P Q T+ P + S TS
Sbjct: 374 RVPPSRNSITLTNLLPGTEYVVSIIAVNGREESVPLVGQQTTVSDVPRDLEVNPTSPTS- 432
Query: 295 SLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVL 353
L + W+ P + Y+++ G SS P+ + T + GL+PG Y +
Sbjct: 433 -LEISWDAPAVTVRY--YRITYG--ETGGSS-PVQEFTVPGTMSRATITGLKPGVDYTIT 486
Query: 354 VKTVSGK 360
V V+G+
Sbjct: 487 VYAVTGR 493
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 66/261 (25%), Positives = 103/261 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTAS-- 85
YR+ P P +S D + S + TKY+ +Y + D LT +
Sbjct: 721 YRVRVNPKEKTGPMKEINLSPDSTSAV-VSGLMVATKYEVSVY----ALKDSLTSRPAQG 775
Query: 86 -ITTPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+TT + PP V + T I W +GF++ I + P I T +
Sbjct: 776 VVTTLENVSPPRRARVTDATETTITITWRTKTE-TITGFQIDAIPAASGQNP--IQRTIS 832
Query: 143 PPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
P Y++ L PG Y++ L+++ ++ S + +T + P +LL
Sbjct: 833 PDVRTYTITGLQPGNDYKIYLYTLNENARSSPVVI-DASTAIDAPSNLRFLTTTTNSLLA 891
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
WQP P + T Y + D P +P L PG +A GL PG Y I + V
Sbjct: 892 SWQP--PRAKITGYIIRYDKPGSPAKELLPRPR---PGTTEATITGLEPGTEYTIYIIAV 946
Query: 262 SEDEISTPTTAQYRTIPLRPL 282
++ S P + RT L L
Sbjct: 947 KNNQKSEPLVGRKRTDDLPTL 967
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 60/248 (24%), Positives = 104/248 (41%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSV--NVRSGKTAQIFWSPPISGKYS 119
G +Y Y Y + +W P PPTNL + N +G + W + S
Sbjct: 26 GVRYQCYCY--GRGIGEWHCQPLQAYAPLSPPTNLRLEPNPDTGILI-VSWDRSTTPGIS 82
Query: 120 GFKLKVISLSEK---TPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
G+++ + + T ++G + + ++L PG Y V +++V D +ES+ S
Sbjct: 83 GYRVTTAPTNGQQGSTLEEVVGADQT---SCTFENLNPGVEYNVSVYAVKDDQESIPI-S 138
Query: 177 RNFTTK-PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEG 235
+ T + P V ++++ + W P AS Y++++ A ESV E +
Sbjct: 139 KTITQEVPQLTDLSFVDI-TDSSIGLRWTP-LNASTIIGYRITVVA--AGESVPIFE-DF 193
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
GL PG Y+ISV T+ S PTT +T P + ++ ++
Sbjct: 194 VDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRF--TNVGPDT 251
Query: 296 LRVVWEPP 303
+RV W P
Sbjct: 252 MRVTWTAP 259
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 66/276 (23%), Positives = 109/276 (39%)
Query: 52 DNIE-FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFW 110
DN+ + LPGT+Y Y+ + H+ + T D PT L + + + + W
Sbjct: 289 DNVVVLTNLLPGTEY-LVRVYSVAEQHESAPLSGIQKTGLDSPTGLDFSDITANSFTVHW 347
Query: 111 SPPISGKYSGFKLKVISLSEKTPPRIIGFTEN---PPAGYS--LKDLTPGGSYQVQLFSV 165
P +G+K++ P +G + PP+ S L +L PG Y V + +V
Sbjct: 348 IAP-RATITGYKIR------HHPEHGVGRPKEDRVPPSRNSITLTNLLPGTEYVVSIIAV 400
Query: 166 YDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
+ESV + TT + P V + T+L + W PA +Y+++
Sbjct: 401 NGREESVPLVGQQ-TTVSDVPRDLEVNPTSPTSLEISWDA--PAVTVRYYRITYGETGGS 457
Query: 226 ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS----------------EDEISTP 269
V ++ P ++A GL PG Y I+V V+ + EI TP
Sbjct: 458 SPV---QEFTVPGTMSRATITGLKPGVDYTITVYAVTGRGDSPASSKPVTVTYKTEIDTP 514
Query: 270 TTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
+ Q + +S + +S RV P KG
Sbjct: 515 SQMQVTDVQDNSISIRWLPSSSPVTGYRVTAVPKKG 550
>UNIPROTKB|F1NJT4 [details] [associations]
symbol:FN1 "Fibronectin" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GeneTree:ENSGT00700000104067 EMBL:AADN02034494 IPI:IPI01017176
Ensembl:ENSGALT00000005663 ArrayExpress:F1NJT4 Uniprot:F1NJT4
Length = 1256
Score = 185 (70.2 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 75/313 (23%), Positives = 139/313 (44%)
Query: 51 KDNIEFSEGL-PGTKYDFYLYYTNSTVHDW-LTWTASITTPPDPPTNLSVNVRSGKTAQI 108
+D E GL PG++Y + + LT T S PP PTNL + + +
Sbjct: 653 EDTAEL-HGLRPGSEYTINIVAIYDDMESLPLTGTQSTAIPP--PTNLKFTQVTPTSLTV 709
Query: 109 FWSPPISGKYSGFKLKVISLSEKTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167
W+ P + + +G++++V + EKT P + I + + + + L Y+V ++++ D
Sbjct: 710 NWNAP-NVRLTGYRVRV-NPKEKTGPMKEINLSPDSTSAV-VSGLMVATKYEVSVYALKD 766
Query: 168 SKESVAYTSRNFTTKPNT--PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
S S TT N P + V ETT+ + W+ T +++ P +
Sbjct: 767 SLTSRP-AQGVVTTLENVSPPRRARVTDATETTITITWRTK--TETITGFQIDAIPAASG 823
Query: 226 ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFT 285
++ + + P GL PG Y I + T++E+ S+P T P +
Sbjct: 824 QNPI---QRTISPDVRTYTITGLQPGNDYKIYLYTLNENARSSPVVIDASTAIDAPSNLR 880
Query: 286 YDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT-KSRDEPTQCDMSEGL 344
+ + T+NSL W+PP+ ++ Y + + +PG+ + + + R T+ ++ GL
Sbjct: 881 F--LTTTTNSLLASWQPPR--AKITGYIIRYD--KPGSPAKELLPRPRPGTTEATIT-GL 933
Query: 345 EPGRTYQVLVKTV 357
EPG Y + + V
Sbjct: 934 EPGTEYTIYIIAV 946
Score = 174 (66.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 80/344 (23%), Positives = 129/344 (37%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWL 80
SS + YR+ +P GH P T V D + + EGL P +Y +Y N L
Sbjct: 535 SSPVTGYRVTAVPKKGHGPTKTKNVPPD-QTQVTI-EGLQPTVEYMVSVYAQNQNGES-L 591
Query: 81 TWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFT 140
+ T D P L+ + +I W P G+ + +++ S E ++
Sbjct: 592 PLVETAVTNIDRPKGLTFTEVDVDSIKIAWESP-QGQVTRYRV-TYSSPEDGIHELLPAP 649
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT-KPNTPGKFIVWFRNETTL 199
L L PG Y + + ++YD ES+ T T P T KF T+L
Sbjct: 650 GGEEDTAELHGLRPGSEYTINIVAIYDDMESLPLTGTQSTAIPPPTNLKFTQV--TPTSL 707
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
V W P T Y+V ++P + + + P A GL+ Y +SV
Sbjct: 708 TVNWNA--PNVRLTGYRVRVNPKEKTGPMKEINLS---PDSTSAVVSGLMVATKYEVSVY 762
Query: 260 TVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
+ + S P T+ P R T T ++ + W +Q+
Sbjct: 763 ALKDSLTSRPAQGVVTTLENVSPPRRARVT----DATETTITITWRTKT--ETITGFQID 816
Query: 316 INVRRPGASS-TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
P AS PI ++ + GL+PG Y++ + T++
Sbjct: 817 AI---PAASGQNPIQRTISPDVRTYTITGLQPGNDYKIYLYTLN 857
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 79/351 (22%), Positives = 137/351 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L++ + + S YR+ P +G V + + F PG +Y+ +Y
Sbjct: 69 LIVSWDRSTTPGISGYRVTTAPTNGQQGSTLEEVVGADQTSCTFENLNPGVEYNVSVYAV 128
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
+ + + +IT T+LS + + + W+P + G+++ V++ E
Sbjct: 129 KDD-QESIPISKTITQEVPQLTDLSFVDITDSSIGLRWTPLNASTIIGYRITVVAAGESV 187
Query: 133 PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW 192
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 188 PI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLRFT 245
Query: 193 FRNETTLLVLWQPSYPASIY-THYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
T+ V W + P SI + + V P E V + P L+PG
Sbjct: 246 NVGPDTMRVTW--TAPTSIVLSSFLVRYSPVKKEEDVAELTIS---PSDNVVVLTNLLPG 300
Query: 252 RAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG-FSEFD 310
Y + V +V+E S P + +T P D + IT+NS V W P+ + +
Sbjct: 301 TEYLVRVYSVAEQHESAPLSGIQKTGLDSPTGL--DFSDITANSFTVHWIAPRATITGYK 358
Query: 311 -KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ V RP P SR+ T + L PG Y V + V+G+
Sbjct: 359 IRHHPEHGVGRPKEDRVP--PSRNSITLTN----LLPGTEYVVSIIAVNGR 403
Score = 168 (64.2 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 79/307 (25%), Positives = 122/307 (39%)
Query: 59 GL-PGTKYDF-YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG YD + N T T PP PT+L T ++ W+ P S
Sbjct: 205 GLEPGIDYDISVITLINGGESAPTTLTQQTAVPP--PTDLRFTNVGPDTMRVTWTAPTSI 262
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYS-LKDLTPGGSYQVQLFSVYDSKESVAYT 175
S F ++ + ++ + T +P L +L PG Y V+++SV + ES +
Sbjct: 263 VLSSFLVRYSPVKKEED--VAELTISPSDNVVVLTNLLPGTEYLVRVYSVAEQHESAPLS 320
Query: 176 SRNFTTKPNTPG-KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
T + G F N T V W P + T YK+ P V +++
Sbjct: 321 GIQKTGLDSPTGLDFSDITANSFT--VHWIA--PRATITGYKIRHHPE---HGVGRPKED 373
Query: 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSN 294
PP L+PG Y +S+ V+ E S P Q T+ P + S TS
Sbjct: 374 RVPPSRNSITLTNLLPGTEYVVSIIAVNGREESVPLVGQQTTVSDVPRDLEVNPTSPTS- 432
Query: 295 SLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVL 353
L + W+ P + Y+++ G SS P+ + T + GL+PG Y +
Sbjct: 433 -LEISWDAPAVTVRY--YRITYG--ETGGSS-PVQEFTVPGTMSRATITGLKPGVDYTIT 486
Query: 354 VKTVSGK 360
V V+G+
Sbjct: 487 VYAVTGR 493
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 66/261 (25%), Positives = 103/261 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTAS-- 85
YR+ P P +S D + S + TKY+ +Y + D LT +
Sbjct: 721 YRVRVNPKEKTGPMKEINLSPDSTSAV-VSGLMVATKYEVSVY----ALKDSLTSRPAQG 775
Query: 86 -ITTPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+TT + PP V + T I W +GF++ I + P I T +
Sbjct: 776 VVTTLENVSPPRRARVTDATETTITITWRTKTE-TITGFQIDAIPAASGQNP--IQRTIS 832
Query: 143 PPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
P Y++ L PG Y++ L+++ ++ S + +T + P +LL
Sbjct: 833 PDVRTYTITGLQPGNDYKIYLYTLNENARSSPVVI-DASTAIDAPSNLRFLTTTTNSLLA 891
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
WQP P + T Y + D P +P L PG +A GL PG Y I + V
Sbjct: 892 SWQP--PRAKITGYIIRYDKPGSPAKELLPRPR---PGTTEATITGLEPGTEYTIYIIAV 946
Query: 262 SEDEISTPTTAQYRTIPLRPL 282
++ S P + RT L L
Sbjct: 947 KNNQKSEPLVGRKRTDDLPTL 967
Score = 138 (53.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 59/248 (23%), Positives = 103/248 (41%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSV--NVRSGKTAQIFWSPPISGKYS 119
G +Y Y Y + +W PPTNL + N +G + W + S
Sbjct: 26 GVRYQCYCY--GRGIGEWHCQPLQAYAALSPPTNLRLEPNPDTGILI-VSWDRSTTPGIS 82
Query: 120 GFKLKVISLSEK---TPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
G+++ + + T ++G + + ++L PG Y V +++V D +ES+ S
Sbjct: 83 GYRVTTAPTNGQQGSTLEEVVGADQT---SCTFENLNPGVEYNVSVYAVKDDQESIPI-S 138
Query: 177 RNFTTK-PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEG 235
+ T + P V ++++ + W P AS Y++++ A ESV E +
Sbjct: 139 KTITQEVPQLTDLSFVDI-TDSSIGLRWTP-LNASTIIGYRITVVA--AGESVPIFE-DF 193
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
GL PG Y+ISV T+ S PTT +T P + ++ ++
Sbjct: 194 VDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRF--TNVGPDT 251
Query: 296 LRVVWEPP 303
+RV W P
Sbjct: 252 MRVTWTAP 259
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 66/276 (23%), Positives = 109/276 (39%)
Query: 52 DNIE-FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFW 110
DN+ + LPGT+Y Y+ + H+ + T D PT L + + + + W
Sbjct: 289 DNVVVLTNLLPGTEY-LVRVYSVAEQHESAPLSGIQKTGLDSPTGLDFSDITANSFTVHW 347
Query: 111 SPPISGKYSGFKLKVISLSEKTPPRIIGFTEN---PPAGYS--LKDLTPGGSYQVQLFSV 165
P +G+K++ P +G + PP+ S L +L PG Y V + +V
Sbjct: 348 IAP-RATITGYKIR------HHPEHGVGRPKEDRVPPSRNSITLTNLLPGTEYVVSIIAV 400
Query: 166 YDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225
+ESV + TT + P V + T+L + W PA +Y+++
Sbjct: 401 NGREESVPLVGQQ-TTVSDVPRDLEVNPTSPTSLEISWDA--PAVTVRYYRITYGETGGS 457
Query: 226 ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS----------------EDEISTP 269
V ++ P ++A GL PG Y I+V V+ + EI TP
Sbjct: 458 SPV---QEFTVPGTMSRATITGLKPGVDYTITVYAVTGRGDSPASSKPVTVTYKTEIDTP 514
Query: 270 TTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
+ Q + +S + +S RV P KG
Sbjct: 515 SQMQVTDVQDNSISIRWLPSSSPVTGYRVTAVPKKG 550
>UNIPROTKB|F1SH38 [details] [associations]
symbol:PTPRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0001525 "angiogenesis" evidence=IEA] [GO:0004725
"protein tyrosine phosphatase activity" evidence=IEA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0001525 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00700000104166 OMA:FTVNCSW EMBL:CU463092
EMBL:CU633413 Ensembl:ENSSSCT00000000543 Uniprot:F1SH38
Length = 2001
Score = 187 (70.9 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 73/310 (23%), Positives = 131/310 (42%)
Query: 55 EFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI 114
+F + +PG KY + + + T T P TNL + S W+P
Sbjct: 1053 KFEDLIPGKKYKIQILTVSGGLFSKEAQTEGRTVPA-AVTNLRITENSTGHLSFSWTPS- 1110
Query: 115 SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD--SKESV 172
G++ G+ + + + R + +S ++L G Y++ + + + S ES+
Sbjct: 1111 KGEFKGYNIFLYNPDGTLQER--AQIDPTVQSFSFQNLLQGRMYKMVIVTCSEELSNESL 1168
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYV 231
+ + N G RN T +L W P+ + + Y++ + P+ + +
Sbjct: 1169 MFGRTVPASVSNLKGSN----RNMTDSLWFSWSPA--SGDFDFYELILYNPNGTKKENWK 1222
Query: 232 EKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLRPLSFTYDKA 289
+K + F GL+PGR Y + V T S D +S + RT P P ++ A
Sbjct: 1223 DKN-----LTEWRFHGLIPGRKYTLCVVTHSGD-LSNKVLGESRTDTAPSPPSLMSF--A 1274
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+ + SL + W+ P ++++D +++ R P + E + GL PGR+
Sbjct: 1275 DVANTSLAITWKGPPDWTDYDDFELQWFPRDAITVFNPYNNRKSEGR---IVYGLRPGRS 1331
Query: 350 YQVLVKTVSG 359
YQ VKTVSG
Sbjct: 1332 YQFSVKTVSG 1341
Score = 176 (67.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 76/279 (27%), Positives = 123/279 (44%)
Query: 83 TASITTPPDPPTNLSVNVR-SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
TA T P+ NL N S ++ + WSPP +G + +++ +++ S +G E
Sbjct: 371 TAVGRTVPEKVGNLEANSNGSMRSLVVSWSPP-AGDWEQYRILLLNDSLVLLNITVGKEE 429
Query: 142 NPPAGYSLKDLTPGGSYQVQL-FSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
+ +L PG Y+V++ + K S R T P + V NET+L
Sbjct: 430 THYVIDEV-ELIPGRQYEVEVTVESGNLKNSKRCHGR---TVPMAVLQLRVKHANETSLS 485
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
++WQ PA+ + Y +S+D D +L + K P + F LVPGR Y +V +
Sbjct: 486 IMWQA--PAAEWEKYIISLDDRD----LLIIHKS-LPRDAKEFTFTDLVPGRKYKAAVTS 538
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
+S D + ++ + RT+P + TS SL W G EF YQV +
Sbjct: 539 ISGD-LKNSSSTKGRTVPAQVTGLRVANQGTTS-SLFTNWTHAPGDREF--YQVLLIHEN 594
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ ++ E ++ L+ G Y V+V TVSG
Sbjct: 595 VVIKNESVSS---ETSRYSF-HSLKSGSLYSVVVTTVSG 629
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 56/238 (23%), Positives = 102/238 (42%)
Query: 83 TASITTPPDPPTNLSVNV-RSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
T + T P PP V+ ++ T+ W P SGK + ++++++ ++KT I
Sbjct: 104 TVVLQTDPLPPARFEVSKEKTTSTSLHVWWTPSSGKVTWYEVQLLDDNQKTQGAQIQ-ER 162
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
Y+ +LT G Y + + ++ K S + T P+ P K + +LL+
Sbjct: 163 TARNEYTFLNLTAGNKYNIAITAISGDKRSFTIYTNGSTVVPS-PVKDVGISAETNSLLI 221
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
W P ++ ++ + +D + +L V AF GL PG YN+++ T
Sbjct: 222 SWSRG-PGNLERYHLMLMD-----KGIL-VHSNTVDKSTTSYAFHGLTPGHLYNVTIVTE 274
Query: 262 SEDEISTPTTAQYRTIPLRP--LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
+ + RT P+ L T D T SL+ W+ P G +F Y ++++
Sbjct: 275 AAG-LQNYRWKPARTTPMEVSNLKVTNDG---TMTSLKAKWQRPSGNVDF--YNLTLS 326
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 69/313 (22%), Positives = 120/313 (38%)
Query: 48 RDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQ 107
R ++ F G KY+ + + + +T T P P ++ ++ +
Sbjct: 162 RTARNEYTFLNLTAGNKYNIAITAISGDKRSFTIYTNGSTVVPSPVKDVGISAETNSLL- 220
Query: 108 IFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167
I WS G + L ++ + + Y+ LTPG Y V + +
Sbjct: 221 ISWSRG-PGNLERYHLMLMDKGILVHSNTV---DKSTTSYAFHGLTPGHLYNVTIVTEAA 276
Query: 168 SKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPES 227
++ + TT + T+L WQ P+ Y +++ +
Sbjct: 277 GLQNYRWKPAR-TTPMEVSNLKVTNDGTMTSLKAKWQR--PSGNVDFYNLTLSHQGTVK- 332
Query: 228 VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYD 287
E P + FK L PGR Y +++ VS E+S TA RT+P + + +
Sbjct: 333 ----ESRILAPHITETQFKNLTPGRLYQVTISCVS-GELSAHKTAVGRTVPEKVGNLEAN 387
Query: 288 KASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSE-GLEP 346
+ SL V W PP G ++++Y++ + IT ++E T + E L P
Sbjct: 388 SNG-SMRSLVVSWSPPAG--DWEQYRILL--LNDSLVLLNITVGKEE-THYVIDEVELIP 441
Query: 347 GRTYQVLVKTVSG 359
GR Y+V V SG
Sbjct: 442 GRQYEVEVTVESG 454
Score = 145 (56.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 55/216 (25%), Positives = 92/216 (42%)
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
Y+ +LT G Y + + ++ K S + T P+ P K + +LL+ W
Sbjct: 168 YTFLNLTAGNKYNIAITAISGDKRSFTIYTNGSTVVPS-PVKDVGISAETNSLLISWSRG 226
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
P ++ ++ + +D + +L V AF GL PG YN+++ T + +
Sbjct: 227 -PGNLERYHLMLMD-----KGIL-VHSNTVDKSTTSYAFHGLTPGHLYNVTIVTEAAG-L 278
Query: 267 STPTTAQYRTIPLRP--LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS 324
RT P+ L T D T SL+ W+ P G +F Y ++++ +
Sbjct: 279 QNYRWKPARTTPMEVSNLKVTNDG---TMTSLKAKWQRPSGNVDF--YNLTLSHQGTVKE 333
Query: 325 STPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
S + E TQ + L PGR YQV + VSG+
Sbjct: 334 SRILAPHITE-TQF---KNLTPGRLYQVTISCVSGE 365
Score = 143 (55.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 73/308 (23%), Positives = 124/308 (40%)
Query: 54 IEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPP 113
I+ E +PG +Y+ + + + + + T P L V + + I W P
Sbjct: 434 IDEVELIPGRQYEVEVTVESGNLKN--SKRCHGRTVPMAVLQLRVKHANETSLSIMWQAP 491
Query: 114 ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY-DSKESV 172
+ ++ + +ISL ++ I ++ DL PG Y+ + S+ D K S
Sbjct: 492 -AAEWEKY---IISLDDRDLLIIHKSLPRDAKEFTFTDLVPGRKYKAAVTSISGDLKNSS 547
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVE 232
+ R T G + ++L W + P Y+V + E+V+ ++
Sbjct: 548 STKGR--TVPAQVTGLRVANQGTTSSLFTNWTHA-PGD-REFYQVLL----IHENVV-IK 598
Query: 233 KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASIT 292
E ++ +F L G Y++ V TVS S + RT+P T + +
Sbjct: 599 NESVSSETSRYSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSG-R 657
Query: 293 SNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
++ L + W P G + D Y V+++ S I KS E C S L PGR Y V
Sbjct: 658 NDYLSISWLPAPG--DVDNYVVTLSHDSRVVQSLVIAKSVSE---CSFSS-LTPGRLYNV 711
Query: 353 LVKTVSGK 360
+ T SGK
Sbjct: 712 TITTRSGK 719
Score = 141 (54.7 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 57/215 (26%), Positives = 89/215 (41%)
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
YS L G Y V + +V S T + G + L + W P+
Sbjct: 609 YSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSGRNDYLSISWLPA 668
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
P + +Y V++ L + K ++ +F L PGR YN+++ T S +
Sbjct: 669 -PGDV-DNYVVTLSHDSRVVQSLVIAKS-----VSECSFSSLTPGRLYNVTITTRS-GKY 720
Query: 267 STPTTAQYRT-IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASS 325
+ Q RT +P + + S S+ L+V W G +FD Y+V+I + +
Sbjct: 721 ENHSFGQERTAVPDKVQGVSISN-SARSDYLKVSWVHATG--DFDHYEVTIKNKNNFIQT 777
Query: 326 TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
I KS +E C + L PGR Y V V T SG+
Sbjct: 778 KTIPKSENE---CVFVK-LVPGRLYSVTVSTKSGQ 808
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 67/276 (24%), Positives = 109/276 (39%)
Query: 88 TPPDPPTNLSVNVRSGKT--AQIFWSPPISGKYSGFKLKVISLSEKTPPRIIG--FTENP 143
T P + ++VN SG+ I W P G + V++LS + R++
Sbjct: 642 TVPSSVSGVTVN-NSGRNDYLSISWLPA-PGDVDNY---VVTLSHDS--RVVQSLVIAKS 694
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+ S LTPG Y V + + E+ ++ G I L V W
Sbjct: 695 VSECSFSSLTPGRLYNVTITTRSGKYENHSFGQERTAVPDKVQGVSISNSARSDYLKVSW 754
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
+ + HY+V+I + +++ + P + F LVPGR Y+++V T S
Sbjct: 755 V--HATGDFDHYEVTIKNKNN-----FIQTKTIPKSENECVFVKLVPGRLYSVTVSTKS- 806
Query: 264 DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGA 323
+ RTIP T S + L+V W G + D+Y++ +
Sbjct: 807 GQYEASEQGNGRTIPEAVKDLTLRNRS--TEDLQVTWTRADG--DVDQYEIQLLFN--DM 860
Query: 324 SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
P + T+ + L PGR Y++LV TVSG
Sbjct: 861 KVFPSFHLVNTATEYRFTS-LTPGRQYKILVLTVSG 895
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 67/273 (24%), Positives = 111/273 (40%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T P+ +L++ RS + Q+ W+ G ++++++ K P N Y
Sbjct: 819 TIPEAVKDLTLRNRSTEDLQVTWTRA-DGDVDQYEIQLLFNDMKVFPSF--HLVNTATEY 875
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPS 206
LTPG Y++ + +V + A+ FT P+ V T +L V W P
Sbjct: 876 RFTSLTPGRQYKILVLTVSGDVQQSAFIE-GFTV-PSVVKNIRVSPNGATDSLTVNWTPG 933
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
Y VS A VE + P ++ F L G Y I + +VS +
Sbjct: 934 --GGDVDSYTVS-----AFRQSQTVESQTIPKHVSEHTFHRLEAGEQYQILIASVS-GSL 985
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST 326
RT+P D A +S+SL V W+ G E +Y + + + G +
Sbjct: 986 KNQIEVFGRTVPASVQGIMADNA-YSSHSLIVSWQKAVGVVE--RYDILL-LSENGILLS 1041
Query: 327 PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
I+++ T+ E L PG+ Y++ + TVSG
Sbjct: 1042 NISEAAT--TKQHKFEDLIPGKKYKIQILTVSG 1072
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 66/306 (21%), Positives = 117/306 (38%)
Query: 56 FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTA-QIFWSPPI 114
F+ PG +Y + + V + T P N+ V+ + + W+P
Sbjct: 877 FTSLTPGRQYKILVLTVSGDVQQ-SAFIEGFTVP-SVVKNIRVSPNGATDSLTVNWTPG- 933
Query: 115 SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS-KESVA 173
G + + S+ + I + ++ L G YQ+ + SV S K +
Sbjct: 934 GGDVDSYTVSAFRQSQTVESQTI---PKHVSEHTFHRLEAGEQYQILIASVSGSLKNQIE 990
Query: 174 YTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK 233
R T + G + +L+V WQ + + Y + + E+ + +
Sbjct: 991 VFGR--TVPASVQGIMADNAYSSHSLIVSWQKA--VGVVERYDILL----LSENGILLSN 1042
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
E Q F+ L+PG+ Y I + TVS S + RT+P + + S +
Sbjct: 1043 ISEAATTKQHKFEDLIPGKKYKIQILTVSGGLFSKEAQTEGRTVPAAVTNLRITENS--T 1100
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQV 352
L W P KG EF Y + + P T +++ +PT S + L GR Y++
Sbjct: 1101 GHLSFSWTPSKG--EFKGYNIFLY--NP--DGTLQERAQIDPTVQSFSFQNLLQGRMYKM 1154
Query: 353 LVKTVS 358
++ T S
Sbjct: 1155 VIVTCS 1160
>UNIPROTKB|P13944 [details] [associations]
symbol:COL12A1 "Collagen alpha-1(XII) chain" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] InterPro:IPR002035 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
PROSITE:PS50025 SMART:SM00210 EMBL:D00824 EMBL:X61024 EMBL:J05137
EMBL:M17375 EMBL:X67327 IPI:IPI00574203 IPI:IPI00786264 PIR:A40020
RefSeq:NP_990352.1 UniGene:Gga.4965 ProteinModelPortal:P13944
PRIDE:P13944 GeneID:395875 KEGG:gga:395875 CTD:1303
HOGENOM:HOG000111877 HOVERGEN:HBG051060 KO:K08132 OrthoDB:EOG4BCDM1
NextBio:20815942 Uniprot:P13944
Length = 3124
Score = 185 (70.2 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 71/279 (25%), Positives = 120/279 (43%)
Query: 85 SITTPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
S+ P D PP+NL ++ + + ++ WSPP ++++ + P + +
Sbjct: 1378 SVKGPGDLPPPSNLVISEVTPHSFRLRWSPPPES-VDRYRVEYYPTTGGPPKQF--YVSR 1434
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
LKDLTP Y V +FSV + + S R T ++ V+ T++ V
Sbjct: 1435 METTTVLKDLTPETEYIVNVFSVVEDESSEPLIGREITYPLSSVRNLNVYDIGSTSMRVR 1494
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA--QAAFKGLVPGRAYNISVQT 260
W+P A T Y ++ +P +A +V EKE GP+ + L+P Y ++
Sbjct: 1495 WEPVNGA---TGYLLTYEPVNA--TVPTTEKEMRV-GPSVNEVQLVDLIPNTEYTLTAYV 1548
Query: 261 VSEDEISTPTTAQYRTIPLR-PLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ D S P T+Q T+PL P T +T +++ V+W+P G + KY + +
Sbjct: 1549 LYGDITSDPLTSQEVTLPLPGPRGVTI--RDVTHSTMNVLWDPAPG--KVRKYIIRYKIA 1604
Query: 320 -RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
I + + T D+S R Y V V V
Sbjct: 1605 DEADVKEVEIDRLKTSTTLTDLSSQ----RLYNVKVVAV 1639
Score = 163 (62.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 87/340 (25%), Positives = 134/340 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTA--- 84
YR++Y P G PP YVSR ++ + P T+Y ++ S V D +
Sbjct: 1415 YRVEYYPTTGGPPKQF-YVSR-METTTVLKDLTPETEYIVNVF---SVVEDESSEPLIGR 1469
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
IT P NL+V + ++ W P ++G +G+ L ++ P P
Sbjct: 1470 EITYPLSSVRNLNVYDIGSTSMRVRWEP-VNGA-TGYLLTYEPVNATVPTTEKEMRVGPS 1527
Query: 145 AG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET--TLLV 201
L DL P Y + + +Y S TS+ T P PG V R+ T T+ V
Sbjct: 1528 VNEVQLVDLIPNTEYTLTAYVLYGDITSDPLTSQEVTL-P-LPGPRGVTIRDVTHSTMNV 1585
Query: 202 LWQPSYPASIYTH---YKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
LW P+ P + + YK++ D D E VE + L R YN+ V
Sbjct: 1586 LWDPA-PGKVRKYIIRYKIA-DEADVKE----VEIDRLK---TSTTLTDLSSQRLYNVKV 1636
Query: 259 QTVSEDEISTPTTAQ-YRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
V ++ S P A Y +P P++ + IT NS R W+ G + Y+++
Sbjct: 1637 VAVYDEGESLPVVASCYSAVP-SPVNLRITE--ITKNSFRGTWD--HGAPDVSLYRITWG 1691
Query: 318 VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
P S + + E L P Y+V V +
Sbjct: 1692 ---PYGRSEKAESIVNGDVNSLLFENLNPDTLYEVSVTAI 1728
Score = 150 (57.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 72/345 (20%), Positives = 138/345 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDN-IEFSEGLPGTKYDF--YLYYTNSTVHDWLTWTA 84
Y L Y P + P + N ++ + +P T+Y Y+ Y + T D LT +
Sbjct: 1504 YLLTYEPVNATVPTTEKEMRVGPSVNEVQLVDLIPNTEYTLTAYVLYGDIT-SDPLT-SQ 1561
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
+T P P +++ + T + W P GK + ++ ++++ + + +
Sbjct: 1562 EVTLPLPGPRGVTIRDVTHSTMNVLWDPA-PGKVRKYIIRY-KIADEADVKEVEI-DRLK 1618
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
+L DL+ Y V++ +VYD ES+ + ++ P+ P + + + W
Sbjct: 1619 TSTTLTDLSSQRLYNVKVVAVYDEGESLPVVASCYSAVPS-PVNLRITEITKNSFRGTWD 1677
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAA-FKGLVPGRAYNISVQTVSE 263
P + Y+++ P E E G + F+ L P Y +SV +
Sbjct: 1678 HGAPD--VSLYRITWGPYGRSEKA-----ESIVNGDVNSLLFENLNPDTLYEVSVTAIYP 1730
Query: 264 DEIST--PTTAQYRTIPLRPLSFTYDKA--------SITSNSLRVVWEPPKGFSEFDKYQ 313
DE T RT+PL P++ K+ + TS+SL V W+P G +Y+
Sbjct: 1731 DESETVDDLIGSERTLPLVPITTPAPKSGPRNLQVYNATSHSLTVKWDPASG--RVQRYK 1788
Query: 314 VSIN-VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ + G + + R + + L+P Y + V ++
Sbjct: 1789 IIYQPINGDGPEQSTMVGGRQNSV---VIQKLQPDTPYAITVSSM 1830
Score = 147 (56.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 89/348 (25%), Positives = 137/348 (39%)
Query: 24 DNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFY---LYYTNS-TVHDW 79
D S YR+ + P +G + V+ D+ +++ F P T Y+ +Y S TV D
Sbjct: 1682 DVSLYRITWGP-YGRSEKAESIVNGDV-NSLLFENLNPDTLYEVSVTAIYPDESETVDDL 1739
Query: 80 LTWTAS-----ITTP-PDP-PTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT 132
+ + ITTP P P NL V + + + W P SG+ +K+ ++
Sbjct: 1740 IGSERTLPLVPITTPAPKSGPRNLQVYNATSHSLTVKWDPA-SGRVQRYKIIYQPINGDG 1798
Query: 133 PPR--IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGK-F 189
P + ++G +N ++ L P Y + + S+Y E T R TKP T K
Sbjct: 1799 PEQSTMVGGRQNSVV---IQKLQPDTPYAITVSSMYADGEGGRMTGRG-RTKPLTTVKNM 1854
Query: 190 IVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
+V+ +TL V W + YKV P E P + L
Sbjct: 1855 LVYDPTTSTLNVRWD--HAEGNPRQYKVFYRPTAGGAE----EMTTVPGNTNYVILRSLE 1908
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
P Y ++V V + TT RT+ R + T NS+ V WEP G
Sbjct: 1909 PNTPYTVTVVPVFPEGDGGRTTDTGRTLE-RGTPRNIQVYNPTPNSMNVRWEPAPG--PV 1965
Query: 310 DKYQVS---INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
+Y+V+ ++ RP S +RD M E L P Y + V
Sbjct: 1966 QQYRVNYSPLSGPRPSESIVVPANTRDV-----MLERLTPDTAYSINV 2008
Score = 129 (50.5 bits), Expect = 0.00026, P = 0.00026
Identities = 76/341 (22%), Positives = 127/341 (37%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR++Y P G P + V + +D + P T Y + + + T
Sbjct: 1968 YRVNYSPLSGPRPSESIVVPANTRD-VMLERLTPDTAYSINVIALYADGEGNPSQAQGRT 2026
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
P P NL V + + + W G +++ + S + P I +T P
Sbjct: 2027 LPRSGPRNLRVFDETTNSLSVQWDHA-DGPVQQYRI-IYSPTVGDP--IDEYTTVPGIRN 2082
Query: 148 S--LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
+ L+ L Y++ + +VY+ + T T P + T V W P
Sbjct: 2083 NVILQPLQSDTPYKITVVAVYEDGDGGQLTGNGRTVGLLPPQNIYITDEWYTRFRVSWDP 2142
Query: 206 SYPASIYTHYKVSIDPPDAPESV-LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
S P+ + YK+ P + E + ++V GE L P Y+++V +
Sbjct: 2143 S-PSPVLG-YKIVYKPVGSNEPMEVFV---GEV---TSYTLHNLSPSTTYDVNVYAQYDS 2194
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS 324
+S P T Q T+ L T K + +R W P + + Y++ +N G+
Sbjct: 2195 GMSIPLTDQGTTLYLNVTDLTTYKIGWDTFCIR--WSPHRSATS---YRLKLNPA-DGSR 2248
Query: 325 STPITKSRDEPTQCDMSEGLEPGRTYQ--VLVKT--VSGKP 361
IT E + C GL P Y V V+T + G P
Sbjct: 2249 GQEITVRGSETSHC--FTGLSPDTEYNATVFVQTPNLEGPP 2287
Score = 128 (50.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 43/159 (27%), Positives = 67/159 (42%)
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYP 208
L+ L P Y V + V+ + T T + TP V+ ++ V W+P+ P
Sbjct: 1904 LRSLEPNTPYTVTVVPVFPEGDGGRTTDTGRTLERGTPRNIQVYNPTPNSMNVRWEPA-P 1962
Query: 209 ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIST 268
+ Y+V+ P P E P + L P AY+I+V + D
Sbjct: 1963 GPVQ-QYRVNYSPLSGPRPS---ESIVVPANTRDVMLERLTPDTAYSINVIALYADGEGN 2018
Query: 269 PTTAQYRTIPLR-PLSF-TYDKASITSNSLRVVWEPPKG 305
P+ AQ RT+P P + +D+ T+NSL V W+ G
Sbjct: 2019 PSQAQGRTLPRSGPRNLRVFDE---TTNSLSVQWDHADG 2054
Score = 128 (50.1 bits), Expect = 0.00033, P = 0.00033
Identities = 59/256 (23%), Positives = 96/256 (37%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY--YTNSTVHDWLTWTAS 85
YR+ Y P G P T V I++N+ T Y + Y + LT
Sbjct: 2059 YRIIYSPTVGDPIDEYTTVP-GIRNNVILQPLQSDTPYKITVVAVYEDGDGGQ-LTGNGR 2116
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T PP N+ + ++ W P S G+K+ + P + F
Sbjct: 2117 -TVGLLPPQNIYITDEWYTRFRVSWDPSPS-PVLGYKIVYKPVGSNEPMEV--FV-GEVT 2171
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
Y+L +L+P +Y V +++ YDS S+ T + T N + T + W P
Sbjct: 2172 SYTLHNLSPSTTYDVNVYAQYDSGMSIPLTDQGTTLYLNVTD-LTTYKIGWDTFCIRWSP 2230
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
A T Y++ ++P D + E F GL P YN +V + +
Sbjct: 2231 HRSA---TSYRLKLNPADGSRGQEITVRGSE----TSHCFTGLSPDTEYNATVFVQTPNL 2283
Query: 266 ISTPTTAQYRTIPLRP 281
P + + T+ L+P
Sbjct: 2284 EGPPVSVREHTV-LKP 2298
Score = 81 (33.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150
+P +NL S K+ +I W P S + +G++++ I + ++ A ++K
Sbjct: 334 EPASNLVATQISSKSVRITWDPSTS-QITGYRVQFIPMIAGGKQHVLSVGPQTTA-LNVK 391
Query: 151 DLTPGGSYQVQLFSV 165
DL+P YQ+ ++++
Sbjct: 392 DLSPDTEYQINVYAM 406
>UNIPROTKB|F1NKN1 [details] [associations]
symbol:COL12A1 "Collagen alpha-1(XII) chain" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0031012 "extracellular matrix" evidence=IEA] InterPro:IPR002035
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
InterPro:IPR001791 SMART:SM00210 OMA:NTEYAVT
GeneTree:ENSGT00700000104243 EMBL:AADN02002491 EMBL:AADN02002492
IPI:IPI00821539 Ensembl:ENSGALT00000037088 ArrayExpress:F1NKN1
Uniprot:F1NKN1
Length = 3124
Score = 185 (70.2 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 71/279 (25%), Positives = 120/279 (43%)
Query: 85 SITTPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
S+ P D PP+NL ++ + + ++ WSPP ++++ + P + +
Sbjct: 1377 SVKGPGDLPPPSNLVISEVTPHSFRLRWSPPPES-VDRYRVEYYPTTGGPPKQF--YVSR 1433
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
LKDLTP Y V +FSV + + S R T ++ V+ T++ V
Sbjct: 1434 METTTVLKDLTPETEYIVNVFSVVEDESSEPLIGREITYPLSSVRNLNVYDIGSTSMRVR 1493
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA--QAAFKGLVPGRAYNISVQT 260
W+P A T Y ++ +P +A +V EKE GP+ + L+P Y ++
Sbjct: 1494 WEPVNGA---TGYLLTYEPVNA--TVPTTEKEMRV-GPSVNEVQLVDLIPNTEYTLTAYV 1547
Query: 261 VSEDEISTPTTAQYRTIPLR-PLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ D S P T+Q T+PL P T +T +++ V+W+P G + KY + +
Sbjct: 1548 LYGDITSDPLTSQEVTLPLPGPRGVTI--RDVTHSTMNVLWDPAPG--KVRKYIIRYKIA 1603
Query: 320 -RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
I + + T D+S R Y V V V
Sbjct: 1604 DEADVKEVEIDRLKTSTTLTDLSSQ----RLYNVKVVAV 1638
Score = 159 (61.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 86/339 (25%), Positives = 130/339 (38%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTA--- 84
YR++Y P G PP YVSR ++ + P T+Y ++ S V D +
Sbjct: 1414 YRVEYYPTTGGPPKQF-YVSR-METTTVLKDLTPETEYIVNVF---SVVEDESSEPLIGR 1468
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
IT P NL+V + ++ W P ++G +G+ L ++ P P
Sbjct: 1469 EITYPLSSVRNLNVYDIGSTSMRVRWEP-VNGA-TGYLLTYEPVNATVPTTEKEMRVGPS 1526
Query: 145 AG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET--TLLV 201
L DL P Y + + +Y S TS+ T P PG V R+ T T+ V
Sbjct: 1527 VNEVQLVDLIPNTEYTLTAYVLYGDITSDPLTSQEVTL-P-LPGPRGVTIRDVTHSTMNV 1584
Query: 202 LWQPSYPASIYTH---YKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
LW P+ P + + YK++ D D E VE + L R YN+ V
Sbjct: 1585 LWDPA-PGKVRKYIIRYKIA-DEADVKE----VEIDRLK---TSTTLTDLSSQRLYNVKV 1635
Query: 259 QTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINV 318
V ++ S P A+ T P IT NS R W+ G + Y+++
Sbjct: 1636 VAVYDEGESLPVAAEAVTPEPVPSPVNLRITEITKNSFRGTWD--HGAPDVSLYRITWG- 1692
Query: 319 RRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
P S + + E L P Y+V V +
Sbjct: 1693 --PYGRSEKAESIVNGDVNSLLFENLNPDTLYEVSVTAI 1729
Score = 147 (56.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 87/347 (25%), Positives = 136/347 (39%)
Query: 24 DNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYL--YYTNSTVHDWLT 81
D S YR+ + P +G + V+ D+ +++ F P T Y+ + Y + + D L
Sbjct: 1683 DVSLYRITWGP-YGRSEKAESIVNGDV-NSLLFENLNPDTLYEVSVTAIYPDESESDDLI 1740
Query: 82 WT------ASITTP-PDP-PTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTP 133
+ ITTP P P NL V + + + W P SG+ +K+ ++ P
Sbjct: 1741 GSERTLPLVPITTPAPKSGPRNLQVYNATSHSLTVKWDPA-SGRVQRYKIIYQPINGDGP 1799
Query: 134 PR--IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGK-FI 190
+ ++G +N ++ L P Y + + S+Y E T R TKP T K +
Sbjct: 1800 EQSTMVGGRQNSVV---IQKLQPDTPYAITVSSMYADGEGGRMTGRG-RTKPLTTVKNML 1855
Query: 191 VWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVP 250
V+ +TL V W + YKV P E P + L P
Sbjct: 1856 VYDPTTSTLNVRWD--HAEGNPRQYKVFYRPTAGGAE----EMTTVPGNTNYVILRSLEP 1909
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
Y ++V V + TT RT+ R + T NS+ V WEP G
Sbjct: 1910 NTPYTVTVVPVFPEGDGGRTTDTGRTLE-RGTPRNIQVYNPTPNSMNVRWEPAPG--PVQ 1966
Query: 311 KYQVS---INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
+Y+V+ ++ RP S +RD M E L P Y + V
Sbjct: 1967 QYRVNYSPLSGPRPSESIVVPANTRDV-----MLERLTPDTAYSINV 2008
Score = 128 (50.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 43/159 (27%), Positives = 67/159 (42%)
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYP 208
L+ L P Y V + V+ + T T + TP V+ ++ V W+P+ P
Sbjct: 1904 LRSLEPNTPYTVTVVPVFPEGDGGRTTDTGRTLERGTPRNIQVYNPTPNSMNVRWEPA-P 1962
Query: 209 ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIST 268
+ Y+V+ P P E P + L P AY+I+V + D
Sbjct: 1963 GPVQ-QYRVNYSPLSGPRPS---ESIVVPANTRDVMLERLTPDTAYSINVIALYADGEGN 2018
Query: 269 PTTAQYRTIPLR-PLSF-TYDKASITSNSLRVVWEPPKG 305
P+ AQ RT+P P + +D+ T+NSL V W+ G
Sbjct: 2019 PSQAQGRTLPRSGPRNLRVFDE---TTNSLSVQWDHADG 2054
Score = 126 (49.4 bits), Expect = 0.00055, P = 0.00055
Identities = 65/266 (24%), Positives = 103/266 (38%)
Query: 93 PTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT--PPRIIGFTENPPAGYSLK 150
P NL + T + W+P G + +++ SL + T R+ G T + L
Sbjct: 908 PRNLITTDITDTTVGLSWTPA-PGTVNNYRIVWKSLYDDTMGEKRVPGNTVDAV----LD 962
Query: 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPAS 210
L P Y++ +++ Y S E FT + V E T+ V WQPS P
Sbjct: 963 GLEPETKYRISVYAAYSSGEGDPVEGEAFTDVSQSARTVTVDNETENTMRVSWQPS-PGK 1021
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA-AFKGLVPGRAYNISVQTVSEDEISTP 269
+ + Y+V P + G+ A + K L P Y++SV + +
Sbjct: 1022 VLS-YRVYYRPRSGGRQMF-----GKVNASATSIVLKRLKPRTTYDLSVVPIYDFGQGKS 1075
Query: 270 TTAQYRTI-PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPI 328
A+ T P +P S T +S RV WEP G Y+V+ + + +
Sbjct: 1076 RKAEGTTASPFKPPRNLRTSDS-TMSSFRVTWEPAPG--RVKGYKVTFHPTEDDRNLGEL 1132
Query: 329 TKSRDEPTQCDMSEGLEPGRTYQVLV 354
+ T + E L G TY+V V
Sbjct: 1133 IVGPYDSTV--VLEELRAGTTYKVNV 1156
Score = 125 (49.1 bits), Expect = 0.00071, P = 0.00071
Identities = 60/258 (23%), Positives = 97/258 (37%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY--YTNSTVHDWLTWTAS 85
YR+ Y P G P T V I++N+ T Y + Y + LT
Sbjct: 2059 YRIIYSPTVGDPIDEYTTVP-GIRNNVILQPLQSDTPYKITVVAVYEDGDGGQ-LTGNGR 2116
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKL--KVISLSEKTPPRIIGFTENP 143
T PP N+ + ++ W P S G+K+ K + P + F
Sbjct: 2117 -TVGLLPPQNIYITDEWYTRFRVSWDPSPS-PVLGYKIVYKPVVQGSNEPMEV--FV-GE 2171
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
Y+L +L+P +Y V +++ YDS S+ T + T N + T + W
Sbjct: 2172 VTSYTLHNLSPSTTYDVNVYAQYDSGMSIPLTDQGTTLYLNVTD-LTTYKIGWDTFCIRW 2230
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
P A T Y++ ++P D + E F GL P YN +V +
Sbjct: 2231 SPHRSA---TSYRLKLNPADGSRGQEITVRGSE----TSHCFTGLSPDTEYNATVFVQTP 2283
Query: 264 DEISTPTTAQYRTIPLRP 281
+ P + + T+ L+P
Sbjct: 2284 NLEGPPVSVREHTV-LKP 2300
Score = 124 (48.7 bits), Expect = 0.00091, P = 0.00091
Identities = 76/343 (22%), Positives = 126/343 (36%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR++Y P G P + V + +D + P T Y + + + T
Sbjct: 1968 YRVNYSPLSGPRPSESIVVPANTRD-VMLERLTPDTAYSINVIALYADGEGNPSQAQGRT 2026
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
P P NL V + + + W G +++ + S + P I +T P
Sbjct: 2027 LPRSGPRNLRVFDETTNSLSVQWDHA-DGPVQQYRI-IYSPTVGDP--IDEYTTVPGIRN 2082
Query: 148 S--LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
+ L+ L Y++ + +VY+ + T T P + T V W P
Sbjct: 2083 NVILQPLQSDTPYKITVVAVYEDGDGGQLTGNGRTVGLLPPQNIYITDEWYTRFRVSWDP 2142
Query: 206 SYPASIYTH---YKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
S P+ + + YK + + P V +V GE L P Y+++V
Sbjct: 2143 S-PSPVLGYKIVYKPVVQGSNEPMEV-FV---GEV---TSYTLHNLSPSTTYDVNVYAQY 2194
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
+ +S P T Q T+ L T K + +R W P + + Y++ +N G
Sbjct: 2195 DSGMSIPLTDQGTTLYLNVTDLTTYKIGWDTFCIR--WSPHRSATS---YRLKLNPA-DG 2248
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQ--VLVKT--VSGKP 361
+ IT E + C GL P Y V V+T + G P
Sbjct: 2249 SRGQEITVRGSETSHC--FTGLSPDTEYNATVFVQTPNLEGPP 2289
Score = 81 (33.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150
+P +NL S K+ +I W P S + +G++++ I + ++ A ++K
Sbjct: 334 EPASNLVATQISSKSVRITWDPSTS-QITGYRVQFIPMIAGGKQHVLSVGPQTTA-LNVK 391
Query: 151 DLTPGGSYQVQLFSV 165
DL+P YQ+ ++++
Sbjct: 392 DLSPDTEYQINVYAM 406
>UNIPROTKB|F1NKZ3 [details] [associations]
symbol:COL14A1 "Collagen alpha-1(XIV) chain" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0031012 "extracellular matrix" evidence=IEA] InterPro:IPR002035
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391
GO:GO:0031012 InterPro:IPR001791 SMART:SM00210
GeneTree:ENSGT00700000104243 IPI:IPI00601719 EMBL:AADN02022556
EMBL:AADN02022557 EMBL:AADN02022558 EMBL:AADN02022559
EMBL:AADN02022560 EMBL:AADN02022561 EMBL:AADN02022562
EMBL:AADN02022563 EMBL:AADN02022564 EMBL:AADN02022565
Ensembl:ENSGALT00000026472 ArrayExpress:F1NKZ3 Uniprot:F1NKZ3
Length = 1806
Score = 166 (63.5 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 60/222 (27%), Positives = 101/222 (45%)
Query: 54 IEFSEGLPGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSP 112
+E LP T+Y +Y D LT + T P PP+NL + +A++ W P
Sbjct: 499 LELDGLLPNTEYTVTVYAMFGEEASDPLTGQET-TLPLSPPSNLKFSDVGHNSAKLTWDP 557
Query: 113 PISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV 172
S G+++ + ++ T + P + ++LK LT Y V +FS+YD +S
Sbjct: 558 A-SKNVKGYRIMYVK-TDGTETNEVEV--GPVSTHTLKSLTALTEYTVAIFSLYDEGQSE 613
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYV 231
T +FTT+ P + + T + V W+P+ +S Y+++ P D ES
Sbjct: 614 PLTG-SFTTRKVPPPQHLEVDEASTDSFRVSWKPT--SSDIAFYRLAWIPLDGGES---- 666
Query: 232 EKEGEPPGPAQA-AFKGLVPGRAYNISVQTVSEDEISTPTTA 272
+E G A + +GL+P Y +S+ V +DE + A
Sbjct: 667 -EEVVLSGDADSYVIEGLLPNTEYEVSLLAVFDDETESEVVA 707
Score = 60 (26.2 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLR-PLSFTYDKASITSNSLRVVWE-PPKG 305
L+P Y +++ + D +A +T+PL P + N LR+ W+ PP
Sbjct: 798 LLPDTEYKVTITPIYADGEGVSVSAPGKTLPLSAPRNLRVSDEWY--NRLRISWDAPPSP 855
Query: 306 FSEFDKYQVSINVRRP 321
+ SINV P
Sbjct: 856 TMGYRIVYKSINVPGP 871
Score = 41 (19.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 7/10 (70%), Positives = 10/10 (100%)
Query: 292 TSNSLRVVWE 301
T++SLRVVW+
Sbjct: 747 TTSSLRVVWD 756
>UNIPROTKB|F1PIP7 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:AAEX03012233 Ensembl:ENSCAFT00000019781 Uniprot:F1PIP7
Length = 2936
Score = 178 (67.7 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 88/354 (24%), Positives = 149/354 (42%)
Query: 15 IKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTN 73
I + NL + YRL++ G P + D+ + +GL PGT+Y LY T
Sbjct: 431 ILVSWNLVPEARGYRLEWRRESGLGVPQKVVLPSDVT-RYQL-DGLQPGTEYRLTLY-TL 487
Query: 74 STVHDWLTWTASITTPPD----PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLS 129
+ T + T P+ P T+L G+ ++ WSP + G + +++ V S
Sbjct: 488 LEGREVATPATVVPTGPELPVGPVTDLQATELPGQRVRVSWSP-VPGA-TEYRITVRSAQ 545
Query: 130 EKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE---SVAYTSRNFTTKPNTP 186
++ ++ + L D+ G SY V++ + ++E S+ R P
Sbjct: 546 GVERTLVLPGSQT---AFDLDDVRAGLSYTVRVSARVGTREGGASILTVRRELEAPLAIP 602
Query: 187 GKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK 246
G +V + T + V W P AS +++S PES + PP
Sbjct: 603 GLRVV-ASDATRVRVAWGPVPGAS---GFRISWRTDGGPES-----SQTLPPESTATDIL 653
Query: 247 GLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGF 306
GL PG +Y ++V + E S P +T PL P+ T +S+S+ + W G
Sbjct: 654 GLRPGTSYQVAVSALRGREESPPVVIVAQTDPLGPVR-TVHVTQTSSSSVTIAWNRVPGA 712
Query: 307 SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKT-VSG 359
+ Y+VS + G + + E T ++ +GLEP Y+V V+ V+G
Sbjct: 713 TG---YRVSWHSGH-GPEKSQLVSG--EATVAEL-DGLEPDTEYRVHVRAHVAG 759
>UNIPROTKB|F1PGJ4 [details] [associations]
symbol:PTPRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR000772 Pfam:PF00652
SMART:SM00458 SUPFAM:SSF50370 PROSITE:PS50231 GO:GO:0004725
GO:GO:0035335 GeneTree:ENSGT00700000104166 EMBL:AAEX03007058
EMBL:AAEX03007056 EMBL:AAEX03007057 Ensembl:ENSCAFT00000000717
Uniprot:F1PGJ4
Length = 2208
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 50/167 (29%), Positives = 84/167 (50%)
Query: 194 RNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGR 252
RN T +L W P+ + + Y++ + P+ + + +K+ + F GLVPGR
Sbjct: 1402 RNMTDSLWFSWSPA--SGDFDFYELILYNPNGTKKENWRDKD-----LTEWRFHGLVPGR 1454
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y + V T S D +S T + RT P P ++ A +T+ SL + W+ P ++++D +
Sbjct: 1455 KYTLCVVTHSGD-LSNRLTGESRTAPSPPSLMSF--ADVTNTSLAITWKGPPDWTDYDDF 1511
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++ + R P + + E + GL PGR+YQ VKTVSG
Sbjct: 1512 ELQWSPRDAITVFNPYSNRKSEGR---IIHGLRPGRSYQFSVKTVSG 1555
Score = 174 (66.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 76/276 (27%), Positives = 125/276 (45%)
Query: 88 TPPDPPTNLSVNVR-SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T P+ NL N S ++ + WSPP +G + +++ + + S +G E
Sbjct: 593 TVPEKVGNLEANSNGSTRSLVVSWSPP-AGDWEQYRILLFNDSVVLLNITLGKDETH--- 648
Query: 147 YSLKD--LTPGGSYQVQL-FSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
Y++ D L PG Y+V++ + K S R T P + V NET+L V+W
Sbjct: 649 YTIDDMGLIPGRQYEVEVTVESGNLKNSKRCQGR---TVPLAVLQLRVKHANETSLGVMW 705
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
Q PA+ + Y +S+ A +L + K P + F LVPGR Y +V ++S
Sbjct: 706 QT--PAAEWEKYTISL----ADRDLLLIHKS-LPKDAKEFTFTDLVPGRKYIATVTSISG 758
Query: 264 DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGA 323
D + ++ + RT+P + ++ Y T++SL W G EF YQV +
Sbjct: 759 D-LKNSSSTKGRTVPAQ-VTGLYVANQGTTSSLFTNWTQALGDIEF--YQVLLIHENVVI 814
Query: 324 SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ ++ E ++ L+ G Y V+V TVSG
Sbjct: 815 KNESVSS---ETSRYSF-HALKSGSLYSVVVTTVSG 846
Score = 160 (61.4 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 68/298 (22%), Positives = 119/298 (39%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
G+KY + + +T +T P P +++++ ++ I WS SG +
Sbjct: 394 GSKYSIAITAVSGEKRSLTIYTNG-STVPSPVKDINISAKTNSLL-ISWSHG-SGNVESY 450
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+L ++ ++ + +S DL PG Y + + + ++ + TT
Sbjct: 451 QLMLMDKGNLVCGNVM---DKHATSHSFNDLIPGHLYNLTIVTEAAGLQNYRWKLAR-TT 506
Query: 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241
+ T+L V WQ P+ Y +++ + E P
Sbjct: 507 PMEVSNLKVTNDGTSTSLKVKWQR--PSGNVDSYNITLFHQRTIK-----ESRVLAPQFT 559
Query: 242 QAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWE 301
+ FK L PGR Y +++ VS E+S A RT+P + + + T SL V W
Sbjct: 560 ETQFKDLTPGRLYQVTISCVS-GELSAQKMAVGRTVPEKVGNLEANSNGST-RSLVVSWS 617
Query: 302 PPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
PP G ++++Y++ + IT +DE GL PGR Y+V V SG
Sbjct: 618 PPAG--DWEQYRILLF--NDSVVLLNITLGKDETHYTIDDMGLIPGRQYEVEVTVESG 671
Score = 143 (55.4 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 68/274 (24%), Positives = 112/274 (40%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T P+P +L++ RS + + WS G ++++++ K P N Y
Sbjct: 1035 TIPEPVRDLTLRNRSTEDLLVTWSRA-DGDVDQYEIQLLFNDMKVFPPF--HLVNTATEY 1091
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPS 206
LTPG Y++ + ++ + A+ FT P+ + T +L V W P
Sbjct: 1092 RFTSLTPGRQYKILVLTISGEVQQSAFIE-GFTV-PSAVKNIHISPNGATDSLTVNWTPG 1149
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
Y VS A VE + ++ F+ L G Y I + +VS +
Sbjct: 1150 --GGDVDSYTVS-----AFRQNQKVESQTISKHVSEYTFQRLEAGELYQIVIASVS-GSL 1201
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSI-NVRRPGASS 325
A RT+P D A +S+SL V W+ G +E +Y++ + N S+
Sbjct: 1202 KNQIDAVGRTVPASVQGIIADNA-YSSHSLTVSWQKAVGVAE--RYEILLLNDNGILLSN 1258
Query: 326 TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
T S T+ E L PG+ Y++ + TVSG
Sbjct: 1259 T----SEPATTKQHKFEDLTPGKKYKIQILTVSG 1288
Score = 136 (52.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 70/302 (23%), Positives = 120/302 (39%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
+PG +Y+ + + + + + T P L V + + + W P + ++
Sbjct: 657 IPGRQYEVEVTVESGNLKN--SKRCQGRTVPLAVLQLRVKHANETSLGVMWQTP-AAEWE 713
Query: 120 GFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY-DSKESVAYTSRN 178
+ ISL+++ I ++ DL PG Y + S+ D K S + R
Sbjct: 714 KY---TISLADRDLLLIHKSLPKDAKEFTFTDLVPGRKYIATVTSISGDLKNSSSTKGR- 769
Query: 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
T G ++ ++L W + I Y+V + E+V+ ++ E
Sbjct: 770 -TVPAQVTGLYVANQGTTSSLFTNWTQAL-GDI-EFYQVLL----IHENVV-IKNESVSS 821
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
++ +F L G Y++ V TVS S + RT+P T + + ++ L +
Sbjct: 822 ETSRYSFHALKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSG-RNDYLSI 880
Query: 299 VWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
W P G + D Y V++ S I KS E C S L PGR Y V + T S
Sbjct: 881 SWLPAPG--DVDNYVVTLTHGNRVVQSLVIAKSVSE---CAFSS-LTPGRLYNVTITTRS 934
Query: 359 GK 360
GK
Sbjct: 935 GK 936
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 65/275 (23%), Positives = 109/275 (39%)
Query: 88 TPPDPPTNLSVNVRSGKT--AQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T P + ++VN SG+ I W P G + + + + +I + + A
Sbjct: 859 TVPSSVSGVTVN-NSGRNDYLSISWLPA-PGDVDNYVVTLTHGNRVVQSLVIAKSVSECA 916
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
LTPG Y V + + E+ ++ S+ T G I L V W
Sbjct: 917 ---FSSLTPGRLYNVTITTRSGKYENHSF-SQERTVPDKVQGVSISNSARSDYLKVSWV- 971
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
+ + + HY+V+I + +++ + P + F LVPGR Y+++V T S
Sbjct: 972 -HASGDFDHYEVTIKNKNN-----FIQTKSVPKAENECVFVKLVPGRLYSVTVSTRS-GP 1024
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASS 325
RTIP T S + L V W G + D+Y++ +
Sbjct: 1025 YEASEQGNGRTIPEPVRDLTLRNRS--TEDLLVTWSRADG--DVDQYEIQLLFN--DMKV 1078
Query: 326 TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
P + T+ + L PGR Y++LV T+SG+
Sbjct: 1079 FPPFHLVNTATEYRFTS-LTPGRQYKILVLTISGE 1112
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 80/332 (24%), Positives = 134/332 (40%)
Query: 36 HGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTN 95
HG+ + +++ + + FS PG Y+ + T S ++ +++ T P D
Sbjct: 898 HGNRVVQSLVIAKSVSE-CAFSSLTPGRLYNVTIT-TRSGKYENHSFSQERTVP-DKVQG 954
Query: 96 LSV-NVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTP 154
+S+ N ++ W SG + +++ + + + + + EN +K L P
Sbjct: 955 VSISNSARSDYLKVSWVHA-SGDFDHYEVTIKNKNNFIQTKSVPKAENECV--FVK-LVP 1010
Query: 155 GGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETT--LLVLWQPSYPASIY 212
G Y V + + E A N T P P + + RN +T LLV W S
Sbjct: 1011 GRLYSVTVSTRSGPYE--ASEQGNGRTIPE-PVRDLT-LRNRSTEDLLVTW--SRADGDV 1064
Query: 213 THYKVSIDPPDAPESVLYVEKEGEPP-----GPAQAAFKGLVPGRAYNISVQTVSEDEIS 267
Y++ + L+ + + PP + F L PGR Y I V T+S E+
Sbjct: 1065 DQYEIQL---------LFNDMKVFPPFHLVNTATEYRFTSLTPGRQYKILVLTIS-GEVQ 1114
Query: 268 TPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP 327
+ T+P + T +SL V W P G + D Y VS + S
Sbjct: 1115 QSAFIEGFTVPSAVKNIHISPNGAT-DSLTVNWTP--GGGDVDSYTVSAFRQNQKVESQT 1171
Query: 328 ITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
I+K E T + LE G YQ+++ +VSG
Sbjct: 1172 ISKHVSEYT----FQRLEAGELYQIVIASVSG 1199
>UNIPROTKB|F6UUL8 [details] [associations]
symbol:PTPRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR000772 Pfam:PF00652
SMART:SM00458 SUPFAM:SSF50370 PROSITE:PS50231 GO:GO:0004725
GO:GO:0035335 GeneTree:ENSGT00700000104166 CTD:5787 KO:K05694
OMA:FTVNCSW EMBL:AAEX03007058 EMBL:AAEX03007056 EMBL:AAEX03007057
RefSeq:XP_538283.3 Ensembl:ENSCAFT00000000719 GeneID:481162
KEGG:cfa:481162 Uniprot:F6UUL8
Length = 2215
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 50/167 (29%), Positives = 84/167 (50%)
Query: 194 RNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGR 252
RN T +L W P+ + + Y++ + P+ + + +K+ + F GLVPGR
Sbjct: 1402 RNMTDSLWFSWSPA--SGDFDFYELILYNPNGTKKENWRDKD-----LTEWRFHGLVPGR 1454
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y + V T S D +S T + RT P P ++ A +T+ SL + W+ P ++++D +
Sbjct: 1455 KYTLCVVTHSGD-LSNRLTGESRTAPSPPSLMSF--ADVTNTSLAITWKGPPDWTDYDDF 1511
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++ + R P + + E + GL PGR+YQ VKTVSG
Sbjct: 1512 ELQWSPRDAITVFNPYSNRKSEGR---IIHGLRPGRSYQFSVKTVSG 1555
Score = 174 (66.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 76/276 (27%), Positives = 125/276 (45%)
Query: 88 TPPDPPTNLSVNVR-SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T P+ NL N S ++ + WSPP +G + +++ + + S +G E
Sbjct: 593 TVPEKVGNLEANSNGSTRSLVVSWSPP-AGDWEQYRILLFNDSVVLLNITLGKDETH--- 648
Query: 147 YSLKD--LTPGGSYQVQL-FSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
Y++ D L PG Y+V++ + K S R T P + V NET+L V+W
Sbjct: 649 YTIDDMGLIPGRQYEVEVTVESGNLKNSKRCQGR---TVPLAVLQLRVKHANETSLGVMW 705
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
Q PA+ + Y +S+ A +L + K P + F LVPGR Y +V ++S
Sbjct: 706 QT--PAAEWEKYTISL----ADRDLLLIHKS-LPKDAKEFTFTDLVPGRKYIATVTSISG 758
Query: 264 DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGA 323
D + ++ + RT+P + ++ Y T++SL W G EF YQV +
Sbjct: 759 D-LKNSSSTKGRTVPAQ-VTGLYVANQGTTSSLFTNWTQALGDIEF--YQVLLIHENVVI 814
Query: 324 SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ ++ E ++ L+ G Y V+V TVSG
Sbjct: 815 KNESVSS---ETSRYSF-HALKSGSLYSVVVTTVSG 846
Score = 160 (61.4 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 68/298 (22%), Positives = 119/298 (39%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
G+KY + + +T +T P P +++++ ++ I WS SG +
Sbjct: 394 GSKYSIAITAVSGEKRSLTIYTNG-STVPSPVKDINISAKTNSLL-ISWSHG-SGNVESY 450
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+L ++ ++ + +S DL PG Y + + + ++ + TT
Sbjct: 451 QLMLMDKGNLVCGNVM---DKHATSHSFNDLIPGHLYNLTIVTEAAGLQNYRWKLAR-TT 506
Query: 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241
+ T+L V WQ P+ Y +++ + E P
Sbjct: 507 PMEVSNLKVTNDGTSTSLKVKWQR--PSGNVDSYNITLFHQRTIK-----ESRVLAPQFT 559
Query: 242 QAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWE 301
+ FK L PGR Y +++ VS E+S A RT+P + + + T SL V W
Sbjct: 560 ETQFKDLTPGRLYQVTISCVS-GELSAQKMAVGRTVPEKVGNLEANSNGST-RSLVVSWS 617
Query: 302 PPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
PP G ++++Y++ + IT +DE GL PGR Y+V V SG
Sbjct: 618 PPAG--DWEQYRILLF--NDSVVLLNITLGKDETHYTIDDMGLIPGRQYEVEVTVESG 671
Score = 143 (55.4 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 68/274 (24%), Positives = 112/274 (40%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T P+P +L++ RS + + WS G ++++++ K P N Y
Sbjct: 1035 TIPEPVRDLTLRNRSTEDLLVTWSRA-DGDVDQYEIQLLFNDMKVFPPF--HLVNTATEY 1091
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPS 206
LTPG Y++ + ++ + A+ FT P+ + T +L V W P
Sbjct: 1092 RFTSLTPGRQYKILVLTISGEVQQSAFIE-GFTV-PSAVKNIHISPNGATDSLTVNWTPG 1149
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
Y VS A VE + ++ F+ L G Y I + +VS +
Sbjct: 1150 --GGDVDSYTVS-----AFRQNQKVESQTISKHVSEYTFQRLEAGELYQIVIASVS-GSL 1201
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSI-NVRRPGASS 325
A RT+P D A +S+SL V W+ G +E +Y++ + N S+
Sbjct: 1202 KNQIDAVGRTVPASVQGIIADNA-YSSHSLTVSWQKAVGVAE--RYEILLLNDNGILLSN 1258
Query: 326 TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
T S T+ E L PG+ Y++ + TVSG
Sbjct: 1259 T----SEPATTKQHKFEDLTPGKKYKIQILTVSG 1288
Score = 136 (52.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 70/302 (23%), Positives = 120/302 (39%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
+PG +Y+ + + + + + T P L V + + + W P + ++
Sbjct: 657 IPGRQYEVEVTVESGNLKN--SKRCQGRTVPLAVLQLRVKHANETSLGVMWQTP-AAEWE 713
Query: 120 GFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY-DSKESVAYTSRN 178
+ ISL+++ I ++ DL PG Y + S+ D K S + R
Sbjct: 714 KY---TISLADRDLLLIHKSLPKDAKEFTFTDLVPGRKYIATVTSISGDLKNSSSTKGR- 769
Query: 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
T G ++ ++L W + I Y+V + E+V+ ++ E
Sbjct: 770 -TVPAQVTGLYVANQGTTSSLFTNWTQAL-GDI-EFYQVLL----IHENVV-IKNESVSS 821
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
++ +F L G Y++ V TVS S + RT+P T + + ++ L +
Sbjct: 822 ETSRYSFHALKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSG-RNDYLSI 880
Query: 299 VWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
W P G + D Y V++ S I KS E C S L PGR Y V + T S
Sbjct: 881 SWLPAPG--DVDNYVVTLTHGNRVVQSLVIAKSVSE---CAFSS-LTPGRLYNVTITTRS 934
Query: 359 GK 360
GK
Sbjct: 935 GK 936
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 65/275 (23%), Positives = 109/275 (39%)
Query: 88 TPPDPPTNLSVNVRSGKT--AQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T P + ++VN SG+ I W P G + + + + +I + + A
Sbjct: 859 TVPSSVSGVTVN-NSGRNDYLSISWLPA-PGDVDNYVVTLTHGNRVVQSLVIAKSVSECA 916
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
LTPG Y V + + E+ ++ S+ T G I L V W
Sbjct: 917 ---FSSLTPGRLYNVTITTRSGKYENHSF-SQERTVPDKVQGVSISNSARSDYLKVSWV- 971
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
+ + + HY+V+I + +++ + P + F LVPGR Y+++V T S
Sbjct: 972 -HASGDFDHYEVTIKNKNN-----FIQTKSVPKAENECVFVKLVPGRLYSVTVSTRS-GP 1024
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASS 325
RTIP T S + L V W G + D+Y++ +
Sbjct: 1025 YEASEQGNGRTIPEPVRDLTLRNRS--TEDLLVTWSRADG--DVDQYEIQLLFN--DMKV 1078
Query: 326 TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
P + T+ + L PGR Y++LV T+SG+
Sbjct: 1079 FPPFHLVNTATEYRFTS-LTPGRQYKILVLTISGE 1112
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 80/332 (24%), Positives = 134/332 (40%)
Query: 36 HGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTN 95
HG+ + +++ + + FS PG Y+ + T S ++ +++ T P D
Sbjct: 898 HGNRVVQSLVIAKSVSE-CAFSSLTPGRLYNVTIT-TRSGKYENHSFSQERTVP-DKVQG 954
Query: 96 LSV-NVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTP 154
+S+ N ++ W SG + +++ + + + + + EN +K L P
Sbjct: 955 VSISNSARSDYLKVSWVHA-SGDFDHYEVTIKNKNNFIQTKSVPKAENECV--FVK-LVP 1010
Query: 155 GGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETT--LLVLWQPSYPASIY 212
G Y V + + E A N T P P + + RN +T LLV W S
Sbjct: 1011 GRLYSVTVSTRSGPYE--ASEQGNGRTIPE-PVRDLT-LRNRSTEDLLVTW--SRADGDV 1064
Query: 213 THYKVSIDPPDAPESVLYVEKEGEPP-----GPAQAAFKGLVPGRAYNISVQTVSEDEIS 267
Y++ + L+ + + PP + F L PGR Y I V T+S E+
Sbjct: 1065 DQYEIQL---------LFNDMKVFPPFHLVNTATEYRFTSLTPGRQYKILVLTIS-GEVQ 1114
Query: 268 TPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP 327
+ T+P + T +SL V W P G + D Y VS + S
Sbjct: 1115 QSAFIEGFTVPSAVKNIHISPNGAT-DSLTVNWTP--GGGDVDSYTVSAFRQNQKVESQT 1171
Query: 328 ITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
I+K E T + LE G YQ+++ +VSG
Sbjct: 1172 ISKHVSEYT----FQRLEAGELYQIVIASVSG 1199
>UNIPROTKB|Q99715 [details] [associations]
symbol:COL12A1 "Collagen alpha-1(XII) chain" species:9606
"Homo sapiens" [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0030020 "extracellular matrix structural constituent conferring
tensile strength" evidence=NAS] [GO:0005595 "collagen type XII"
evidence=NAS] [GO:0030199 "collagen fibril organization"
evidence=NAS] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0001501 "skeletal system development"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS] [GO:0005615
"extracellular space" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] InterPro:IPR002035 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Reactome:REACT_118779 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0070062 SUPFAM:SSF49265
GO:GO:0030199 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005788 GO:GO:0001501
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
PROSITE:PS50025 EMBL:AL080250 GO:GO:0030020 SMART:SM00210 CTD:1303
HOVERGEN:HBG051060 KO:K08132 OrthoDB:EOG4BCDM1 EMBL:U73778
EMBL:U73779 EMBL:AL096771 EMBL:AL354664 EMBL:AF061871 EMBL:U68139
EMBL:AH004088 IPI:IPI00221384 IPI:IPI00302944 IPI:IPI00329573
PIR:A44479 RefSeq:NP_004361.3 RefSeq:NP_542376.2 UniGene:Hs.101302
ProteinModelPortal:Q99715 SMR:Q99715 IntAct:Q99715 STRING:Q99715
PhosphoSite:Q99715 DMDM:146345397 PaxDb:Q99715 PRIDE:Q99715
Ensembl:ENST00000322507 Ensembl:ENST00000345356
Ensembl:ENST00000416123 GeneID:1303 KEGG:hsa:1303 UCSC:uc003phs.3
UCSC:uc003pht.3 GeneCards:GC06M075850 H-InvDB:HIX0006013
HGNC:HGNC:2188 HPA:HPA009143 MIM:120320 neXtProt:NX_Q99715
PharmGKB:PA26704 InParanoid:Q99715 OMA:NTEYAVT ChiTaRS:COL12A1
GenomeRNAi:1303 NextBio:5299 ArrayExpress:Q99715 Bgee:Q99715
CleanEx:HS_COL12A1 Genevestigator:Q99715 GermOnline:ENSG00000111799
GO:GO:0005595 Uniprot:Q99715
Length = 3063
Score = 177 (67.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 95/363 (26%), Positives = 145/363 (39%)
Query: 3 IIVHGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPG 62
+I H + V P + S D Y+++Y P G YVSR ++ + + P
Sbjct: 1392 VISERTHRSFRVSWTPPSDSVDR--YKVEYYPVSGGKRQEF-YVSR-METSTVLKDLKPE 1447
Query: 63 TKYDFYLYYTNSTVHDWLTWTASIT--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG 120
T+Y +Y S V D + T T P P +L++ T + W P + G +G
Sbjct: 1448 TEYVVNVY---SVVEDEYSEPLKGTEKTLPVPVVSLNIYDVGPTTMHVQWQP-VGGA-TG 1502
Query: 121 FKL--KVISLSEKTPPRII--GFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ L K + +E T P+ + G T N L DL P Y V + +V S T
Sbjct: 1503 YILSYKPVKDTEPTRPKEVRLGPTVND---MQLTDLVPNTEYAVTVQAVLHDLTSEPVTV 1559
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE 236
R T P + +T+ V W+P P + Y V P+ E V VE +
Sbjct: 1560 REVTLPLPRPQDLKLRDVTHSTMNVFWEP-VPGKV-RKYIVRYKTPE--EDVKEVEVDRS 1615
Query: 237 PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
+ K L Y +SV V ++ S P TAQ T P+ P +TS
Sbjct: 1616 E---TSTSLKDLFSQTLYTVSVSAVHDEGESPPVTAQETTRPV-PAPTNLKITEVTSEGF 1671
Query: 297 RVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK--SRDEPTQCDMSEGLEPGRTYQVLV 354
R W+ G S+ Y+++ P SS + + DE T + E L P Y+V +
Sbjct: 1672 RGTWD--HGASDVSLYRITW---APFGSSDKMETILNGDENTL--VFENLNPNTIYEVSI 1724
Query: 355 KTV 357
+
Sbjct: 1725 TAI 1727
Score = 173 (66.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 68/261 (26%), Positives = 106/261 (40%)
Query: 85 SITTPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
S+ P D P+NL ++ R+ ++ ++ W+PP S +K++ +S +
Sbjct: 1378 SVKGPGDLEAPSNLVISERTHRSFRVSWTPP-SDSVDRYKVEYYPVSGGKRQEF--YVSR 1434
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
LKDL P Y V ++SV + + S T P ++ TT+ V
Sbjct: 1435 METSTVLKDLKPETEYVVNVYSVVEDEYSEPLKGTE-KTLPVPVVSLNIYDVGPTTMHVQ 1493
Query: 203 WQPSYPASIYT-HYK-VSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
WQP A+ Y YK V P P+ V + G Q LVP Y ++VQ
Sbjct: 1494 WQPVGGATGYILSYKPVKDTEPTRPKEV----RLGPTVNDMQLT--DLVPNTEYAVTVQA 1547
Query: 261 VSEDEISTPTTAQYRTIPL-RPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
V D S P T + T+PL RP +T +++ V WEP G + KY V
Sbjct: 1548 VLHDLTSEPVTVREVTLPLPRPQDLKL--RDVTHSTMNVFWEPVPG--KVRKYIVRYKTP 1603
Query: 320 RPGASSTPITKSRDEPTQCDM 340
+ +S + D+
Sbjct: 1604 EEDVKEVEVDRSETSTSLKDL 1624
Score = 148 (57.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 77/296 (26%), Positives = 121/296 (40%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYL--YYTNSTVHDW 79
+SD S YR+ + P G T ++ D ++ + F P T Y+ + Y + + D
Sbjct: 1679 ASDVSLYRITWAP-FGSSDKMETILNGD-ENTLVFENLNPNTIYEVSITAIYPDESESDD 1736
Query: 80 LTWTAS----ITT--PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVI-SLSE-K 131
L + +TT P P NL V + + + W P SG+ +++ S E
Sbjct: 1737 LIGSERTLPILTTQAPKSGPRNLQVYNATSNSLTVKWDPA-SGRVQKYRITYQPSTGEGN 1795
Query: 132 TPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP-NTPGKFI 190
IG +N LK TP Y + + S+Y E T R TKP NT
Sbjct: 1796 EQTTTIGGRQNSVVLQKLKPDTP---YTITVSSLYPDGEGGRMTGRG-KTKPLNTVRNLR 1851
Query: 191 VWFRNETTLLVLWQPSYPASIYTHYKVSIDPP-DAPESVLYVEKEGEPPGPAQAAFKGLV 249
V+ + +TL V W + YK+ P PE ++ + P A + L
Sbjct: 1852 VYDPSTSTLNVRWD--HAEGNPRQYKLFYAPAAGGPEELVPI-----PGNTNYAILRNLQ 1904
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
P +Y ++V V + T+ RT+ +R L+ + T NSL V W+P G
Sbjct: 1905 PDTSYTVTVVPVYTEGDGGRTSDTGRTL-MRGLARNVQVYNPTPNSLDVRWDPAPG 1959
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 74/335 (22%), Positives = 125/335 (37%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
YR+ Y P+ G TT + ++++ + P T Y + T
Sbjct: 1783 YRITYQPSTGEGNEQTTTIGGR-QNSVVLQKLKPDTPYTITVSSLYPDGEGGRMTGRGKT 1841
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
P + NL V S T + W G +KL + + P ++ N Y
Sbjct: 1842 KPLNTVRNLRVYDPSTSTLNVRWDHA-EGNPRQYKL-FYAPAAGGPEELVPIPGN--TNY 1897
Query: 148 S-LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
+ L++L P SY V + VY + + T V+ +L V W P+
Sbjct: 1898 AILRNLQPDTSYTVTVVPVYTEGDGGRTSDTGRTLMRGLARNVQVYNPTPNSLDVRWDPA 1957
Query: 207 YPASIYTHYKVSIDPPDA--PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P + Y+V P D P + V P + L+P Y++++ + D
Sbjct: 1958 -PGPVL-QYRVVYSPVDGTRPSESIVV-----PGNTRMVHLERLIPDTLYSVNLVALYSD 2010
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS 324
P+ AQ RT+P R T+NSL V W+ G +Y++ + P
Sbjct: 2011 GEGNPSPAQGRTLP-RSGPRNLRVFGETTNSLSVAWDHADG--PVQQYRI---IYSPTVG 2064
Query: 325 STPITKSRDEPTQCD--MSEGLEPGRTYQVLVKTV 357
PI + P + + + + L+P Y++ V V
Sbjct: 2065 D-PIDEYTTVPGRRNNVILQPLQPDTPYKITVIAV 2098
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 85/337 (25%), Positives = 134/337 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLP-GTKYDFYL--YYTNSTVHDWLTWTA 84
Y + Y P G T V D + + +GL GT+Y + Y S D L
Sbjct: 844 YLVTYTPVAGGETQEVT-VRGDTTNTV--LQGLKEGTQYALSVTALYA-SGAGDALFGEG 899
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFW-SPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
+ P +L + + +W S P G G+++ SL + E+
Sbjct: 900 TTLEERGSPQDLVTKDITDTSIGAYWTSAP--GMVRGYRVSWKSLYDDVDTGEKNLPEDA 957
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI-VWFRNETTLLVL 202
+++L P Y++ +F+ Y S E T + TT+ + K + V E T+ V
Sbjct: 958 -IHTMIENLQPETKYRISVFATYSSGEGEPLTG-DATTELSQDSKTLKVDEETENTMRVT 1015
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV- 261
W+P+ P + +Y+V P + + V K PP K L P Y+I+V +
Sbjct: 1016 WKPA-PGKV-VNYRVVYRPHGRGKQM--VAKV--PPTVTSTVLKRLQPQTTYDITVLPIY 1069
Query: 262 --SEDEI--STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
E ++ + TTA P R L T D T +S RV WEP G E Y+V+ +
Sbjct: 1070 KMGEGKLRQGSGTTASRFKSP-RNLK-TSDP---TMSSFRVTWEPAPG--EVKGYKVTFH 1122
Query: 318 VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
+ + T + E L G TY+V V
Sbjct: 1123 PTGDDRRLGELVVGPYDNTV--VLEELRAGTTYKVNV 1157
>UNIPROTKB|F1N401 [details] [associations]
symbol:COL12A1 "Collagen alpha-1(XII) chain" species:9913
"Bos taurus" [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] InterPro:IPR002035
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
InterPro:IPR001791 SMART:SM00210 OMA:NTEYAVT
GeneTree:ENSGT00700000104243 EMBL:DAAA02025271 IPI:IPI01017728
IntAct:F1N401 Ensembl:ENSBTAT00000026725 ArrayExpress:F1N401
Uniprot:F1N401
Length = 3126
Score = 186 (70.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 69/251 (27%), Positives = 106/251 (42%)
Query: 85 SITTPPD--PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE-KTPPRIIGFTE 141
S+ P D P+NL ++ R+ ++ ++ W+PP S +K++ +S K + E
Sbjct: 1378 SVKGPGDLEAPSNLVLSERTHRSMRVSWTPP-SDSVDRYKVEYYPVSGGKRQEFYVSRLE 1436
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
LKDL P Y V ++SV + + S T P ++ TT+ V
Sbjct: 1437 RSTV---LKDLKPETEYVVNVYSVVEDEYSEPLKGTE-KTLPVPVVSLNIYNIGSTTMHV 1492
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
WQP A+ YT V+ +P +A E EP L P Y ++VQ V
Sbjct: 1493 QWQPVGGATGYT---VTYEPINATVPTKPKEMRLEPT-VNDVQLSDLFPNTEYAVTVQAV 1548
Query: 262 SEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRP 321
D S P TA+ T+PL P +T +++ V WEP G + KY V
Sbjct: 1549 LHDLTSEPVTAREVTLPL-PSPRDLKLRDVTHSTMNVAWEPAPG--KVRKYIVRYKTPEE 1605
Query: 322 GASSTPITKSR 332
A + +SR
Sbjct: 1606 EAKEVEVDRSR 1616
Score = 167 (63.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 87/361 (24%), Positives = 143/361 (39%)
Query: 3 IIVHGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPG 62
++ H + V P + S D Y+++Y P G YVSR ++ + + P
Sbjct: 1392 VLSERTHRSMRVSWTPPSDSVDR--YKVEYYPVSGGKRQEF-YVSR-LERSTVLKDLKPE 1447
Query: 63 TKYDFYLYYTNSTVHDWLTWTASIT--TPPDPPTNLSV-NVRSGKTAQIFWSPPISGKYS 119
T+Y +Y S V D + T T P P +L++ N+ S T + W P + G +
Sbjct: 1448 TEYVVNVY---SVVEDEYSEPLKGTEKTLPVPVVSLNIYNIGS-TTMHVQWQP-VGGA-T 1501
Query: 120 GFKLKVISLSEKTPPRIIGFTENPPAG-YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN 178
G+ + ++ P + P L DL P Y V + +V S T+R
Sbjct: 1502 GYTVTYEPINATVPTKPKEMRLEPTVNDVQLSDLFPNTEYAVTVQAVLHDLTSEPVTARE 1561
Query: 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
T +P + +T+ V W+P+ P + Y V P+ + V++
Sbjct: 1562 VTLPLPSPRDLKLRDVTHSTMNVAWEPA-PGKV-RKYIVRYKTPEEEAKEVEVDRSR--- 1616
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
A K L Y +SV V E+ S P TAQ T + P +T S R
Sbjct: 1617 --ASTPLKDLFSQTLYTVSVSAVYEEGESPPVTAQETTHTV-PAPTNLQITEVTPESFRG 1673
Query: 299 VWEPPKGFSEFDKYQVSINVRRPGASSTPITK--SRDEPTQCDMSEGLEPGRTYQVLVKT 356
W+ G S+ Y+++ P S+ + + DE T + + L P Y+V V
Sbjct: 1674 TWD--HGASDVSLYRITW---APSGSADKMETILNGDENTL--VFQNLNPNTLYEVSVTA 1726
Query: 357 V 357
+
Sbjct: 1727 I 1727
Score = 148 (57.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 77/345 (22%), Positives = 134/345 (38%)
Query: 28 YRLDYIPAHGHPP--PNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTW--T 83
Y + Y P + P P + + D ++ S+ P T+Y + + +HD + T
Sbjct: 1503 YTVTYEPINATVPTKPKEMRLEPTVND-VQLSDLFPNTEYAVTV---QAVLHDLTSEPVT 1558
Query: 84 A-SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
A +T P P +L + + T + W P GK + ++ + E+ + +
Sbjct: 1559 AREVTLPLPSPRDLKLRDVTHSTMNVAWEPA-PGKVRKYIVRYKTPEEEAKEVEV---DR 1614
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
A LKDL Y V + +VY+ ES T++ T P + +
Sbjct: 1615 SRASTPLKDLFSQTLYTVSVSAVYEEGESPPVTAQETTHTVPAPTNLQITEVTPESFRGT 1674
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W + AS + Y+++ P + + + + E F+ L P Y +SV +
Sbjct: 1675 WD--HGASDVSLYRITWAPSGSADKMETILNGDENT----LVFQNLNPNTLYEVSVTAIY 1728
Query: 263 EDEI-STPTTAQYRTIPLRPLSFTYDKA--------SITSNSLRVVWEPPKGFSEFDKYQ 313
DE S RT+ L PL+ K+ + TSNSL V W+P G KY+
Sbjct: 1729 PDESESDDLIGSERTLRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPASG--RVQKYR 1786
Query: 314 VSINVRR-PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
++ G T R + + L+P Y + V ++
Sbjct: 1787 ITYQPSTGEGNEQTTTIGGRQNSV---LLQKLKPDTPYTITVSSL 1828
Score = 39 (18.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 15 IKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLP 61
I++P L++ + L I A PP + + D ++ + S +P
Sbjct: 3 IRLPPALAALGAALLLSSIEAEVEPPSDLNFKIID-ENTVHMSWAIP 48
>UNIPROTKB|J3QT52 [details] [associations]
symbol:PTPRB "Receptor-type tyrosine-protein phosphatase
beta" species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0004725 GO:GO:0035335 EMBL:AC025569 EMBL:AC083809
HGNC:HGNC:9665 ChiTaRS:PTPRB ProteinModelPortal:J3QT52
Ensembl:ENST00000451516 Uniprot:J3QT52
Length = 1907
Score = 173 (66.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 77/299 (25%), Positives = 126/299 (42%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
G+KY+ + + + +T +T P P ++ ++ ++ I WS SG +
Sbjct: 176 GSKYNIAITAVSGGKRSFSVYTNG-STVPSPVKDIGISTKANSLL-ISWSHG-SGNVERY 232
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+L L +K G + Y+ LTPG Y + + + ++ Y + T
Sbjct: 233 RLM---LMDKGILVHGGVVDKHATSYAFHGLTPGYLYNLTVMTEAAGLQN--YRWKLVRT 287
Query: 182 KPNTPGKFIVWFRNE-TTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
P V T+L V WQ P ++ + Y +++ + E P
Sbjct: 288 APMEVSNLKVTNDGSLTSLKVKWQRP-PGNVDS-YNITLSHKGTIK-----ESRVLAPWI 340
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW 300
+ FK LVPGR Y ++V VS E+S A RT PL L A+ TS L ++W
Sbjct: 341 TETHFKELVPGRLYQVTVSCVS-GELSAQKMAVGRTFPLAVLQLRVKHANETS--LSIMW 397
Query: 301 EPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ P +E++KY +S+ R ++K E T D L PGR Y V ++SG
Sbjct: 398 QTP--VAEWEKYIISLADRDLLLIHKSLSKDAKEFTFTD----LVPGRKYMATVTSISG 450
Score = 164 (62.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 195 NETTLLVLWQPSYPAS-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
N T LW PAS + Y++ + P+ + + +K+ + F+GLVPGR
Sbjct: 1093 NRNTTDSLWFNWSPASGDFDFYELILYNPNGTKKENWKDKD-----LTEWRFQGLVPGRK 1147
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
Y + V T S D +S TA+ RT P P ++ A I + SL + W+ P +++++ ++
Sbjct: 1148 YVLWVVTHSGD-LSNKVTAESRTAPSPPSLMSF--ADIANTSLAITWKGPPDWTDYNDFE 1204
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ R P + E + GL PGR+YQ VKTVSG
Sbjct: 1205 LQWLPRDALTVFNPYNNRKSEGR---IVYGLRPGRSYQFNVKTVSG 1247
Score = 147 (56.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 64/242 (26%), Positives = 104/242 (42%)
Query: 83 TASITTPPDPPTNLSVNV-RSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
T + T P PP V+ ++ T+ W P SGK + ++ + L ++ +I G
Sbjct: 103 TVVLQTDPLPPARFGVSKEKTTSTSLHVWWTPSSGKVTSYE---VQLFDENNQKIQGVQI 159
Query: 142 NPPAG---YSLKDLTPGGSYQVQLFSVYDSKESVA-YTSRNFTTKPNTPGKFIVWFRNET 197
Y+ +LT G Y + + +V K S + YT N +T P+ P K I
Sbjct: 160 QESTSWNEYTFFNLTAGSKYNIAITAVSGGKRSFSVYT--NGSTVPS-PVKDIGISTKAN 216
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
+LL+ W S+ + Y++ + V+K AF GL PG YN++
Sbjct: 217 SLLISW--SHGSGNVERYRLMLMDKGILVHGGVVDKHA-----TSYAFHGLTPGYLYNLT 269
Query: 258 VQTVSEDEISTPTTAQYRTIPLRP--LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
V T + + RT P+ L T D S+TS L+V W+ P G D Y ++
Sbjct: 270 VMTEAAG-LQNYRWKLVRTAPMEVSNLKVTND-GSLTS--LKVKWQRPPG--NVDSYNIT 323
Query: 316 IN 317
++
Sbjct: 324 LS 325
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 57/214 (26%), Positives = 88/214 (41%)
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
YS L G Y V + +V S T + G + L V W +
Sbjct: 518 YSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSGRNDYLSVSWLLA 577
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
P + +Y+V++ L + K + +F L PGR Y +++ T S +
Sbjct: 578 -PGDV-DNYEVTLSHDGKVVQSLVIAKSVR-----ECSFSSLTPGRLYTVTITTRS-GKY 629
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST 326
+ +Q RT+P + + S S+ LRV W G +FD Y+V+I + +
Sbjct: 630 ENHSFSQERTVPDKVQGVSVSN-SARSDYLRVSWVHATG--DFDHYEVTIKNKNNFIQTK 686
Query: 327 PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
I KS +E C + L PGR Y V V T SG+
Sbjct: 687 SIPKSENE---CVFVQ-LVPGRLYSVTVTTKSGQ 716
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 68/280 (24%), Positives = 112/280 (40%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T P+P +L++ RS + + WS +G ++++++ K P N Y
Sbjct: 727 TIPEPVKDLTLRNRSTEDLHVTWSGA-NGDVDQYEIQLLFNDMKVFPPF--HLVNTATEY 783
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQP- 205
LTPG Y++ + ++ + A+ FT P+ + T +L V W P
Sbjct: 784 RFTSLTPGRQYKILVLTISGDVQQSAFIE-GFTV-PSAVKNIHISPNGATDSLTVNWTPG 841
Query: 206 -----SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
SY S + H + +D P+ V + F L G Y I + +
Sbjct: 842 GGDVDSYTVSAFRHSQ-KVDSQTIPKHVF------------EHTFHRLEAGEQYQIMIAS 888
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSE-FDKYQVSINVR 319
VS + RT+P D A +S SL V W+ G +E +D ++ N
Sbjct: 889 VS-GSLKNQINVVGRTVPASVQGVIADNA-YSSYSLIVSWQKAAGVAERYDILLLTENGI 946
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+S P T T+ E L PG+ Y++ + TVSG
Sbjct: 947 LLRNTSEPAT------TKQHKFEDLTPGKKYKIQILTVSG 980
Score = 131 (51.2 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 53/212 (25%), Positives = 86/212 (40%)
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207
S LTPG Y V + + E+ ++ S+ T G + L V W +
Sbjct: 608 SFSSLTPGRLYTVTITTRSGKYENHSF-SQERTVPDKVQGVSVSNSARSDYLRVSWV--H 664
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIS 267
+ HY+V+I + +++ + P + F LVPGR Y+++V T S +
Sbjct: 665 ATGDFDHYEVTIKNKNN-----FIQTKSIPKSENECVFVQLVPGRLYSVTVTTKS-GQYE 718
Query: 268 TPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP 327
RTIP T S + L V W G + D+Y++ + P
Sbjct: 719 ANEQGNGRTIPEPVKDLTLRNRS--TEDLHVTWSGANG--DVDQYEIQLLFN--DMKVFP 772
Query: 328 ITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ T+ + L PGR Y++LV T+SG
Sbjct: 773 PFHLVNTATEYRFTS-LTPGRQYKILVLTISG 803
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 75/308 (24%), Positives = 124/308 (40%)
Query: 56 FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVR-SGKTA-QIFWSPP 113
F E +PG Y T S V L+ P L + V+ + +T+ I W P
Sbjct: 345 FKELVPGRLYQV----TVSCVSGELSAQKMAVGRTFPLAVLQLRVKHANETSLSIMWQTP 400
Query: 114 ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY-DSKESV 172
++ ++ + +ISL+++ I ++ DL PG Y + S+ D K S
Sbjct: 401 VA-EWEKY---IISLADRDLLLIHKSLSKDAKEFTFTDLVPGRKYMATVTSISGDLKNSS 456
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVE 232
+ R T + ++L W + + Y+V + E+V+ ++
Sbjct: 457 SVKGR--TVPAQVTDLHVANQGMTSSLFTNWTQAQGDVEF--YQVLL----IHENVV-IK 507
Query: 233 KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASIT 292
E ++ +F L G Y++ V TVS S + RT+P T + +
Sbjct: 508 NESISSETSRYSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSG-R 566
Query: 293 SNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
++ L V W G + D Y+V+++ S I KS E C S L PGR Y V
Sbjct: 567 NDYLSVSWLLAPG--DVDNYEVTLSHDGKVVQSLVIAKSVRE---CSFSS-LTPGRLYTV 620
Query: 353 LVKTVSGK 360
+ T SGK
Sbjct: 621 TITTRSGK 628
Score = 125 (49.1 bits), Expect = 0.00042, P = 0.00042
Identities = 65/308 (21%), Positives = 116/308 (37%)
Query: 56 FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTA-QIFWSPPI 114
F+ PG +Y + + V + T P N+ ++ + + W+P
Sbjct: 785 FTSLTPGRQYKILVLTISGDVQQ-SAFIEGFTVP-SAVKNIHISPNGATDSLTVNWTPG- 841
Query: 115 SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS-KESVA 173
G + + S+K + I ++ L G YQ+ + SV S K +
Sbjct: 842 GGDVDSYTVSAFRHSQKVDSQTI---PKHVFEHTFHRLEAGEQYQIMIASVSGSLKNQIN 898
Query: 174 YTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK 233
R T + G + +L+V WQ + A + Y + + E+ + +
Sbjct: 899 VVGR--TVPASVQGVIADNAYSSYSLIVSWQKA--AGVAERYDILL----LTENGILLRN 950
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
EP Q F+ L PG+ Y I + TVS S + RT+P + S
Sbjct: 951 TSEPATTKQHKFEDLTPGKKYKIQILTVSGGLFSKEAQTEGRTVPAAVTDLRITENSTRH 1010
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQV 352
S R W +G E Y + + P + +++ +P S + L GR Y++
Sbjct: 1011 LSFR--WTASEG--ELSWYNIFLY--NPDGNLQE--RAQVDPLVQSFSFQNLLQGRMYKM 1062
Query: 353 LVKTVSGK 360
++ T SG+
Sbjct: 1063 VIVTHSGE 1070
>MGI|MGI:2665790 [details] [associations]
symbol:Tnn "tenascin N" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0007160 "cell-matrix
adhesion" evidence=IDA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0016049 "cell growth"
evidence=IDA] [GO:0016477 "cell migration" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IDA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 MGI:MGI:2665790
INTERPRO:IPR002181 INTERPRO:IPR020837 GO:GO:0007165 GO:GO:0005615
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016477
GO:GO:0016049 SUPFAM:SSF49265 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0042802 GO:GO:0007409 GO:GO:0005178
PROSITE:PS01186 GO:GO:0007160 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 InterPro:IPR013111
Pfam:PF07974 GeneTree:ENSGT00700000104067 KO:K06252
HOGENOM:HOG000234355 CTD:63923 eggNOG:NOG279542 HOVERGEN:HBG106611
OMA:NTKAPTD OrthoDB:EOG49078D EMBL:AF455756 EMBL:BC138335
EMBL:BC138336 IPI:IPI00229117 RefSeq:NP_808507.2 UniGene:Mm.90140
ProteinModelPortal:Q80Z71 STRING:Q80Z71 PhosphoSite:Q80Z71
PRIDE:Q80Z71 Ensembl:ENSMUST00000039178 GeneID:329278
KEGG:mmu:329278 InParanoid:Q80Z71 NextBio:398669 Bgee:Q80Z71
CleanEx:MM_TNN Genevestigator:Q80Z71 GermOnline:ENSMUSG00000026725
Uniprot:Q80Z71
Length = 1560
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 75/328 (22%), Positives = 129/328 (39%)
Query: 19 ENLSSDNSTYRLDYIPAHGHPPPNTTYV-SRDIKDNIEFSEGLPGTKYDFYLYYTNSTVH 77
EN ++ Y+L Y P G T SRD K + + PGT+Y + +
Sbjct: 372 ENPLTEVDYYKLRYGPLTGQEVTEVTVPKSRDPKSRYDITGLQPGTEYKITVVPIRGDL- 430
Query: 78 DWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRII 137
+ + T D PTN+ N + TA + W P + + ++ I+ +T + +
Sbjct: 431 EGKPILLNGRTEIDGPTNVVTNQVTEDTASVSWDP-VRADIDKYVVRYIAPDGETKEKAV 489
Query: 138 GFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET 197
++ L L PG +Y+V +++ ++ S ++ T + ++P + E
Sbjct: 490 PKDQSSTV---LTGLKPGEAYKVFVWAERGNQGSKKADTKALT-EIDSPENLVTDRVTEN 545
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
+L V W P A I Y VS D + V+K+ GL PG Y +
Sbjct: 546 SLSVSWDP-VEADI-DRYVVSYTSVDGETKQVPVKKDQR-----STVLTGLSPGVEYKVY 598
Query: 258 VQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
V D S + T P + D+ +T N+L V W+P + + D+Y VS
Sbjct: 599 VWAEKGDRESKKANTKAPTDIDSPKNLVTDQ--VTENTLSVSWDPVQ--ANIDRYMVSYT 654
Query: 318 VRRPGASSTPITKSRDEPTQCDMSEGLE 345
P+ K + + G+E
Sbjct: 655 SADGETREVPVPKEKSSTVLTGLRPGVE 682
Score = 158 (60.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 70/295 (23%), Positives = 113/295 (38%)
Query: 21 LSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDW 79
+ +D Y + Y G VS+D + GL PG +Y ++ D
Sbjct: 730 VEADIDRYMVRYTSPDGET--KEVPVSKDKSSTV--LRGLRPGVEYKVDVW-AQKGAQDS 784
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
T D P NL + TA + W P + + ++ S+ +T ++G
Sbjct: 785 RKANTKAPTDIDSPKNLVTEQVTESTATVSWDP-VEADIDRYVVRYTSVDGETREFLVGK 843
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
+ L + PG YQV +++ ++ES TS T + P + ETTL
Sbjct: 844 DQTSTV---LTGMRPGVEYQVDVWAQKGTQES-RKTSTKAPTDIDGPKNLVTDQVTETTL 899
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
V W P A I Y V PD + V K+ + +GL PG Y + V
Sbjct: 900 SVSWDP-VEADI-DRYMVRYTSPDGETKEVPVSKD-----KSSTVLRGLRPGVEYKVDVW 952
Query: 260 TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+ S + T P + D+ +T +L V W+P + ++ D+Y V
Sbjct: 953 AQKGAQDSRKANTKAPTDIDSPKNLAIDQ--VTETTLSVSWDPVQ--ADIDRYVV 1003
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 72/325 (22%), Positives = 123/325 (37%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLT 81
SS+ Y L Y P V ++ + + + LPGTKY L +
Sbjct: 285 SSEVDYYLLSYYPLGKEQATKQVRVPKE-QHTYDITGLLPGTKYIVTLRNVKKDISSSPQ 343
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRI-IGFT 140
+ TT VN + + + W P++ + +KL+ L+ + + + +
Sbjct: 344 HLLA-TTDLAVVGTAWVNEETETSLDVEWENPLT-EVDYYKLRYGPLTGQEVTEVTVPKS 401
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
+P + Y + L PG Y++ + + E N T+ + P + E T
Sbjct: 402 RDPKSRYDITGLQPGTEYKITVVPIRGDLEGKPILL-NGRTEIDGPTNVVTNQVTEDTAS 460
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
V W P A I Y V PD +++ P + GL PG AY + V
Sbjct: 461 VSWDP-VRADI-DKYVVRYIAPDGE-----TKEKAVPKDQSSTVLTGLKPGEAYKVFVWA 513
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
++ S + T P + D+ +T NSL V W+P + ++ D+Y VS
Sbjct: 514 ERGNQGSKKADTKALTEIDSPENLVTDR--VTENSLSVSWDPVE--ADIDRYVVSYTSVD 569
Query: 321 PGASSTPITKSRDEPTQCDMSEGLE 345
P+ K + +S G+E
Sbjct: 570 GETKQVPVKKDQRSTVLTGLSPGVE 594
Score = 141 (54.7 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 66/326 (20%), Positives = 118/326 (36%)
Query: 21 LSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDW 79
+ +D Y + Y G VS+D + GL PG +Y ++ D
Sbjct: 906 VEADIDRYMVRYTSPDGET--KEVPVSKDKSSTV--LRGLRPGVEYKVDVW-AQKGAQDS 960
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
T D P NL+++ + T + W P + + ++ S ++ +IG
Sbjct: 961 RKANTKAPTDIDSPKNLAIDQVTETTLSVSWDP-VQADIDRYVVRYTSADGESKEFLIGK 1019
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
+ L L PG Y+V++++ ++ES + T ++P + E T
Sbjct: 1020 EQRSTV---LTGLRPGVEYKVEVWAQKGARESKKANTEGHTDI-DSPKNLVTNQVTENTA 1075
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
+ W P A I Y V D + V KE + GL PG Y + V
Sbjct: 1076 TISWDP-VQADI-DRYMVRYTSADGETREIPVRKE-----KSSTVLTGLRPGVEYTVQVW 1128
Query: 260 TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
S + T P + ++ +T N+ + W+P + + D+Y V
Sbjct: 1129 AQKGARESKKAKTKAPTEIDSPKNLVTNR--VTENTATISWDPVR--ANIDRYMVRYTSA 1184
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLE 345
P++K + + G+E
Sbjct: 1185 DGETKEIPVSKDQSSTILTGLKPGME 1210
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 74/340 (21%), Positives = 128/340 (37%)
Query: 21 LSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDW 79
+ +D Y + Y G V +D + + GL PG +Y Y++
Sbjct: 554 VEADIDRYVVSYTSVDGET--KQVPVKKDQRSTV--LTGLSPGVEYKVYVWAEKGDRESK 609
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
T + T D P NL + + T + W P + + + S +T R +
Sbjct: 610 KANTKA-PTDIDSPKNLVTDQVTENTLSVSWDP-VQANIDRYMVSYTSADGET--REVPV 665
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
+ + L L PG Y+V +++ ++ES ++ T + P + ETTL
Sbjct: 666 PKEKSSTV-LTGLRPGVEYKVHVWAQKGTQESRKANTKA-PTDIDGPKNLVTDQVTETTL 723
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
V W P A I Y V PD + V K+ + +GL PG Y + V
Sbjct: 724 SVSWDP-VEADI-DRYMVRYTSPDGETKEVPVSKD-----KSSTVLRGLRPGVEYKVDVW 776
Query: 260 TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
+ S + T P + ++ +T ++ V W+P + ++ D+Y V
Sbjct: 777 AQKGAQDSRKANTKAPTDIDSPKNLVTEQ--VTESTATVSWDPVE--ADIDRYVVRYT-- 830
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ +D+ + + G+ PG YQV V G
Sbjct: 831 SVDGETREFLVGKDQTST--VLTGMRPGVEYQVDVWAQKG 868
Score = 134 (52.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/166 (29%), Positives = 76/166 (45%)
Query: 196 ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
E +LLV W+PS S +Y +S P ++ V P GL+PG Y
Sbjct: 275 ENSLLVSWEPS---SEVDYYLLSYYPLGKEQATKQVRV---PKEQHTYDITGLLPGTKYI 328
Query: 256 ISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
++++ V +D S+P T L + + T SL V WE P +E D Y++
Sbjct: 329 VTLRNVKKDISSSPQHL-LATTDLAVVGTAWVNEE-TETSLDVEWENP--LTEVDYYKLR 384
Query: 316 INVRRPGASSTPIT--KSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
G T +T KSRD ++ D++ GL+PG Y++ V + G
Sbjct: 385 YGPLT-GQEVTEVTVPKSRDPKSRYDIT-GLQPGTEYKITVVPIRG 428
Score = 130 (50.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 62/265 (23%), Positives = 110/265 (41%)
Query: 93 PTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDL 152
P L + + + + W P S + + L L ++ + + + Y + L
Sbjct: 265 PQGLQLLKSTENSLLVSWEP--SSEVDYYLLSYYPLGKEQATKQVRVPKEQHT-YDITGL 321
Query: 153 TPGGSYQVQLFSVYDSKESVAYTSRNF--TTKPNTPGKFIVWFRNETTLLVLWQPSYPAS 210
PG Y V L +V K+ ++ + ++ TT G V ET+L V W+ P +
Sbjct: 322 LPGTKYIVTLRNV---KKDISSSPQHLLATTDLAVVGTAWVNEETETSLDVEWEN--PLT 376
Query: 211 IYTHYKVSIDPPDAPE-SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTP 269
+YK+ P E + + V K +P ++ GL PG Y I+V + D P
Sbjct: 377 EVDYYKLRYGPLTGQEVTEVTVPKSRDPK--SRYDITGLQPGTEYKITVVPIRGDLEGKP 434
Query: 270 TTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT 329
RT P + ++ +T ++ V W+P + ++ DKY V P +
Sbjct: 435 ILLNGRTEIDGPTNVVTNQ--VTEDTASVSWDPVR--ADIDKYVVRYIA--PDGETKEKA 488
Query: 330 KSRDEPTQCDMSEGLEPGRTYQVLV 354
+D+ + + GL+PG Y+V V
Sbjct: 489 VPKDQSST--VLTGLKPGEAYKVFV 511
Score = 46 (21.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 292 TSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS 324
T +S V WEP KG EF V + +R G S
Sbjct: 1511 TKHSEGVNWEPWKGH-EFSIPYVELKIRPFGYS 1542
>RGD|1305922 [details] [associations]
symbol:Ptprb "protein tyrosine phosphatase, receptor type, B"
species:10116 "Rattus norvegicus" [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] [GO:0016311 "dephosphorylation" evidence=ISO]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 RGD:1305922 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0001525 GO:GO:0004725
GO:GO:0035335 EMBL:CH473960 GeneTree:ENSGT00700000104166 CTD:5787
KO:K05694 IPI:IPI00360200 RefSeq:XP_003750369.1
RefSeq:XP_003754334.1 Ensembl:ENSRNOT00000006501 GeneID:314843
KEGG:rno:314843 UCSC:RGD:1305922 Uniprot:D3ZTG5
Length = 2000
Score = 173 (66.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 48/167 (28%), Positives = 85/167 (50%)
Query: 194 RNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGR 252
RN T +L W P+ + + Y++ + P+ + + EK+ + F+GL+PGR
Sbjct: 1185 RNMTDSLWFSWSPA--SGDFDFYELILYNPNGTKKENWREKD-----VTEWRFQGLIPGR 1237
Query: 253 AYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
Y + V T S D +S T + RT P P ++ A + + SL + W+ P +++++ +
Sbjct: 1238 KYTLYVVTHSGD-LSNKVTGEGRTAPSPPSLLSF--ADVANTSLAITWKGPPDWTDYNDF 1294
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
++ PG + T + ++ + GL PGR+YQ VKTVSG
Sbjct: 1295 ELQW---LPGDALTVFNPYSSKKSEGRIVNGLRPGRSYQFSVKTVSG 1338
Score = 168 (64.2 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 71/277 (25%), Positives = 118/277 (42%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
+T P P ++ ++ I WS G F+L ++ + +
Sbjct: 201 STGPSPVEDIGISPNPNSLL-ISWSRG-PGNVEQFRLMLMDKGAIVQDTNV---DKRDTS 255
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE-TTLLVLWQP 205
Y+ + LTPG Y V + ++ ++ + T P V T+L V WQ
Sbjct: 256 YAFRGLTPGHLYNVTIVTMASGLQNSRWKLGR--TAPMEVSNLKVTSGGSLTSLNVKWQK 313
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
P + Y +++ + E + PP + FK LVPGR Y ++++ VS E
Sbjct: 314 --PLGVIDSYSITLSHQGTVK-----ESKTLPPRATEIQFKDLVPGRFYQVTIRCVS-GE 365
Query: 266 ISTPTTAQYRTIPLRPLSF-TYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS 324
+S +A RT+P + + +Y++ I S V W PP G ++D Y++ +
Sbjct: 366 LSAEKSAMGRTVPEKVSNLVSYNE--IWMKSFAVNWTPPAG--DWDHYRILLFNDSLVLL 421
Query: 325 STPITKSRDEPTQCDMSEGLE--PGRTYQVLVKTVSG 359
+T + K E T + EGLE PGR Y+V V SG
Sbjct: 422 NTTVGK---EETHFAL-EGLELIPGRQYEVEVIVESG 454
Score = 165 (63.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 60/236 (25%), Positives = 107/236 (45%)
Query: 86 ITTPPDPPTNLSVNVR--SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
+ T P PP L VN + T Q+ W+P SGK + +++++ + + +
Sbjct: 107 LQTDPLPPARLEVNPERTTSTTLQVRWTPS-SGKVTWYEVQLFDQNNQKIQEVQVQESAT 165
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
+ Y+ +LT G SY++ + +V K S YT N +T P+ P + I N +LL+
Sbjct: 166 WSQYTFLNLTAGSSYKIGITAVSGGKRSFPVYT--NGSTGPS-PVEDIGISPNPNSLLIS 222
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W P ++ +++ + A V+K AF+GL PG YN+++ T++
Sbjct: 223 WSRG-PGNV-EQFRLMLMDKGAIVQDTNVDKRD-----TSYAFRGLTPGHLYNVTIVTMA 275
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKA-SITSNSLRVVWEPPKGFSEFDKYQVSIN 317
+ RT P+ + S+TS L V W+ P G D Y ++++
Sbjct: 276 SG-LQNSRWKLGRTAPMEVSNLKVTSGGSLTS--LNVKWQKPLGV--IDSYSITLS 326
Score = 162 (62.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 76/306 (24%), Positives = 125/306 (40%)
Query: 56 FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPIS 115
F+ +PG Y + T S ++ + + T P+P NL++ RS + + WS +
Sbjct: 788 FARLVPGRLYSITVT-TKSGQYE-ASEQGTGRTIPEPVKNLTLLNRSTEDLHVTWSRA-N 844
Query: 116 GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYT 175
G ++++++ K P I + N Y LTPG Y++ + ++ + A+
Sbjct: 845 GDVDQYEVQLLFNDMKVFPPI--YLVNTATEYQFSALTPGRHYKILVLTISGDVQQPAFI 902
Query: 176 SRNFTTKPNTPGKFIVWFRNETT-LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
T P+T + T L V W P Y VS D VE
Sbjct: 903 EG--LTVPSTVKNIHISANGATDRLTVTWSPG--GGDVDSYVVSAFRQDEK-----VESH 953
Query: 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSN 294
P ++ F L G Y I++ +VS + +T+P D A +SN
Sbjct: 954 TLPKHGSEHTFHRLEAGATYRIAIVSVS-GSLRNQIDVLGQTVPASVHGVVADNA-YSSN 1011
Query: 295 SLRVVWEPPKGFSE-FDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353
SL V W+ G +E +D +S N +S P T + + E L PG+ Y++
Sbjct: 1012 SLTVSWQKALGMAERYDILLLSENGVLLSNTSEPATVKQHK------FEDLTPGKKYKMQ 1065
Query: 354 VKTVSG 359
+ TVSG
Sbjct: 1066 ILTVSG 1071
Score = 160 (61.4 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 58/214 (27%), Positives = 93/214 (43%)
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
YS + L G Y V + +V S + T + G + L V W P+
Sbjct: 609 YSFRALRSGSLYSVVVTTVSGGIPSRQVVAEGRTVPSSVSGVTVNNSGRNDYLSVSWLPA 668
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
P ++ HY V++ L K ++ +F L PGR YN+++ T S +
Sbjct: 669 -PGEVH-HYVVTLSHDSKVVQSLITAKF-----VSECSFSSLTPGRLYNVTITTKSGN-Y 720
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST 326
+ + ++ RT+P + + S S+ L+V W G +FD Y+V+I R +
Sbjct: 721 ESHSFSEERTVPDKVQGISVSN-SARSDYLKVSWVHATG--DFDHYEVTIKNRDSFIQTK 777
Query: 327 PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
I KS +E C + L PGR Y + V T SG+
Sbjct: 778 SIPKSENE---CVFAR-LVPGRLYSITVTTKSGQ 807
Score = 159 (61.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 73/275 (26%), Positives = 115/275 (41%)
Query: 88 TPPDPPTNLSVNVRSGKT--AQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T P + ++VN SG+ + W P G+ + + +S K +I T +
Sbjct: 642 TVPSSVSGVTVN-NSGRNDYLSVSWLPA-PGEVHHYVV-TLSHDSKVVQSLI--TAKFVS 696
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
S LTPG Y V + + + ES +++ T G + L V W
Sbjct: 697 ECSFSSLTPGRLYNVTITTKSGNYESHSFSEER-TVPDKVQGISVSNSARSDYLKVSWV- 754
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS-ED 264
+ + HY+V+I D+ +++ + P + F LVPGR Y+I+V T S +
Sbjct: 755 -HATGDFDHYEVTIKNRDS-----FIQTKSIPKSENECVFARLVPGRLYSITVTTKSGQY 808
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS 324
E S T RTIP + T S + L V W G + D+Y+V +
Sbjct: 809 EASEQGTG--RTIPEPVKNLTLLNRS--TEDLHVTWSRANG--DVDQYEVQLLFN--DMK 860
Query: 325 STPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
P + T+ S L PGR Y++LV T+SG
Sbjct: 861 VFPPIYLVNTATEYQFS-ALTPGRHYKILVLTISG 894
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 77/320 (24%), Positives = 128/320 (40%)
Query: 42 NTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVR 101
NTT + +E E +PG +Y+ + + + + + T P L +
Sbjct: 422 NTTVGKEETHFALEGLELIPGRQYEVEVIVESGNLRN--SERCQGRTVPLAVLQLRIKQA 479
Query: 102 SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161
+ + I W P+ G++ + ISL ++ I Y+ +L PG +Y+
Sbjct: 480 NETSLGITWRAPL-GEWEKY---TISLMDRELFVIHKSLSKDAKEYTFTNLMPGRNYKAT 535
Query: 162 LFSVY-DSKESVAYTSRNFTTKPNTPGKFIVWFRNETT-LLVLWQPSYPASIYTHYKVSI 219
+ S+ D K+S + R T P V + T+ L W + + Y+V +
Sbjct: 536 VTSMSGDLKQSASIQGR---TVPAQVTDLEVSNQGMTSSLFTNWTKALGDVEF--YQVLL 590
Query: 220 DPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPL 279
E+V+ V+ E + +F+ L G Y++ V TVS S A+ RT+P
Sbjct: 591 ----IHENVV-VKNESVSSDSSWYSFRALRSGSLYSVVVTTVSGGIPSRQVVAEGRTVPS 645
Query: 280 RPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCD 339
T + + ++ L V W P G E Y V+++ S K E C
Sbjct: 646 SVSGVTVNNSG-RNDYLSVSWLPAPG--EVHHYVVTLSHDSKVVQSLITAKFVSE---CS 699
Query: 340 MSEGLEPGRTYQVLVKTVSG 359
S L PGR Y V + T SG
Sbjct: 700 FSS-LTPGRLYNVTITTKSG 718
>UNIPROTKB|F1N8A2 [details] [associations]
symbol:PTPRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00700000104166 OMA:FTVNCSW EMBL:AADN02009855
EMBL:AADN02009854 IPI:IPI00589154 Ensembl:ENSGALT00000016330
Uniprot:F1N8A2
Length = 2001
Score = 173 (66.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 77/321 (23%), Positives = 135/321 (42%)
Query: 42 NTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNV 100
NTT + +++ + + GL PG +Y+ + + + + T T P+P L V
Sbjct: 425 NTT-LGKNVTEYLVRDVGLIPGRQYEVEVVVESGDLQSRASCTGR--TAPEPVLQLRVKH 481
Query: 101 RSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQV 160
+ + + W P++ ++ + V+SL ++ I ++ +L PG Y
Sbjct: 482 ANESSLSVMWVTPVA-EWDSY---VVSLGDRDLTVIKKGLGKEAKEFTFNELVPGRKYTA 537
Query: 161 QLFSVYDSKESVAYTSRNFTTKP-NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSI 219
+ ++ + +TS T P G + + +L W + Y+V +
Sbjct: 538 TVTTISGILSN--WTSVEGRTVPAQVTGLTVASQGSTNSLFTNWTKAL--GDVDSYQVLL 593
Query: 220 DPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPL 279
E+V+ ++ E P + F L PG Y++ V TVS S T A+ RT+P
Sbjct: 594 ----IHENVV-IKNETVPSETNEYHFYPLKPGGLYSVVVTTVSGGISSRQTIAEGRTVPS 648
Query: 280 RPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCD 339
T + + S+ L V W P G + D Y V+++ + I+KS E C
Sbjct: 649 SVTGVTVNNSG-RSDYLSVSWLPASG--DVDSYLVTLSHDDQIIQTLTISKSLSE---CS 702
Query: 340 MSEGLEPGRTYQVLVKTVSGK 360
S L PG Y V++ T SGK
Sbjct: 703 FSS-LTPGTLYNVMITTKSGK 722
Score = 171 (65.3 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 85/310 (27%), Positives = 133/310 (42%)
Query: 56 FSEGLPGTKYDFYLYYT--NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPP 113
F+ +PG KY+ L N + ++ S T P P N+ V V++ + WSP
Sbjct: 172 FTGLVPGNKYNIVLTAVAGNKSTPEFRI-NGS-TAVPSPVKNIQVIVKTD-SIHASWSPG 228
Query: 114 ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVA 173
SG +KL V+ + T ENP Y LT G Y + + + ES A
Sbjct: 229 -SGHVDLYKL-VLFDNHGTVHE--SHQENPLTSYIFSGLTAGHLYNLSVITQAAELESTA 284
Query: 174 YTSRNFTTKPNTPGKFI-VWFRNET---TLLVLWQPSYPASIYTHYKVSIDPPDAPESVL 229
+ R T P P + + + N+ TL V W+ P+ Y +++ + + V
Sbjct: 285 F--RIVRTGP--PAEVLDLTVTNDDSFDTLKVKWRR--PSGGVDFYNITLSHLRSVKEVK 338
Query: 230 YVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKA 289
++ P + F L PGR Y I+ +T+S E+ T A RT P + +S
Sbjct: 339 TLQ-----PAVTETHFDKLTPGRLYQITARTIS-GELFTDKMATGRTFPQK-VSELKAGG 391
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+LRV W PP G + ++Y + + +T + K+ E D+ GL PGR
Sbjct: 392 GGWLRTLRVNWLPPAG--DLERYHLLLWNHSALVLNTTLGKNVTEYLVRDV--GLIPGRQ 447
Query: 350 YQVLVKTVSG 359
Y+V V SG
Sbjct: 448 YEVEVVVESG 457
Score = 157 (60.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 68/270 (25%), Positives = 120/270 (44%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150
P ++ V T Q+ +S S G+ + + + + + RI G E S +
Sbjct: 1089 PAAVTNLKVTKNTTDQLSFSWTTSQGELDSYDIFLYNPDKSLHDRISG--EQHLQQCSFQ 1146
Query: 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPA 209
+L G Y++ + V S + +S T P RN T +L W P+ A
Sbjct: 1147 NLRQGRMYRMVI--VTHSGDLTNESSVFGRTAPAPVVGLKASNRNMTDSLWFTWNPA--A 1202
Query: 210 SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTP 269
Y+ ++ P+ + K+ + + F+GLVPGR Y + V T S D I+T
Sbjct: 1203 GDVDFYEFNLYNPNGTQKESLQGKDLK-----EWYFQGLVPGRKYTLVVVTHSGDLINT- 1256
Query: 270 TTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT 329
A+ RT P P + ++ + + SL + W P ++++D +++ + P P +
Sbjct: 1257 ANAEGRTAPSPPNTVSF--TDVANTSLSITWLGPPDWTDYDDFELQWLPKDPLTVFNPYS 1314
Query: 330 KSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
S+ ++ + GL PGR Y+ V+TVSG
Sbjct: 1315 SSK---SKVRIIYGLRPGRLYKFSVRTVSG 1341
Score = 154 (59.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 73/301 (24%), Positives = 122/301 (40%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKT--AQIFWSPPISGKY 118
PG Y + + + T A T P T ++VN SG++ + W P SG
Sbjct: 619 PGGLYSVVVTTVSGGISSRQT-IAEGRTVPSSVTGVTVN-NSGRSDYLSVSWLPA-SGDV 675
Query: 119 SGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN 178
+ L +S ++ + + S LTPG Y V + + E+ ++ SR
Sbjct: 676 DSY-LVTLSHDDQIIQTLT--ISKSLSECSFSSLTPGTLYNVMITTKSGKYENHSF-SRE 731
Query: 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
T G + L V W + + + Y+V I + +++ + P
Sbjct: 732 RTVPSGVQGLTVSNSARSDYLKVSWL--HASGSFDSYEVIIKNNND-----FIQTKSVPK 784
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
+ F LVPGR Y+++V T S + T RT+P T S + LRV
Sbjct: 785 DENECVFTNLVPGRQYSVTVSTRS-GKYETSERVFGRTMPESVKGLTLSNRS--TEDLRV 841
Query: 299 VWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
W +G + DKY++ + + PI + +C + L PGR Y+++V T+S
Sbjct: 842 TWSKAEG--DVDKYEIQL-LYNDMKIFPPIFLG-NTIEECWFT-ALTPGRLYKIVVLTIS 896
Query: 359 G 359
G
Sbjct: 897 G 897
Score = 147 (56.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 65/281 (23%), Positives = 117/281 (41%)
Query: 55 EFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI 114
+F + LPG KY ++ + + T T P TNL V + W+
Sbjct: 1055 KFEDLLPGKKYKIHILTVSGGLFSKRAETVGRTVPA-AVTNLKVTKNTTDQLSFSWTTS- 1112
Query: 115 SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAY 174
G+ + + + + + RI G E S ++L G Y++ + V S +
Sbjct: 1113 QGELDSYDIFLYNPDKSLHDRISG--EQHLQQCSFQNLRQGRMYRMVI--VTHSGDLTNE 1168
Query: 175 TSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK 233
+S T P RN T +L W P+ A Y+ ++ P+ + K
Sbjct: 1169 SSVFGRTAPAPVVGLKASNRNMTDSLWFTWNPA--AGDVDFYEFNLYNPNGTQKESLQGK 1226
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
+ + + F+GLVPGR Y + V T S D I+T A+ RT P P + ++ + +
Sbjct: 1227 DLK-----EWYFQGLVPGRKYTLVVVTHSGDLINT-ANAEGRTAPSPPNTVSF--TDVAN 1278
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDE 334
SL + W P ++++D +++ + P P + S+ +
Sbjct: 1279 TSLSITWLGPPDWTDYDDFELQWLPKDPLTVFNPYSSSKSK 1319
Score = 144 (55.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 57/214 (26%), Positives = 84/214 (39%)
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
Y L PGG Y V + +V S + T + G + L V W P+
Sbjct: 612 YHFYPLKPGGLYSVVVTTVSGGISSRQTIAEGRTVPSSVTGVTVNNSGRSDYLSVSWLPA 671
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
+ Y V++ D L + K ++ +F L PG YN+ + T S +
Sbjct: 672 --SGDVDSYLVTLSHDDQIIQTLTISKS-----LSECSFSSLTPGTLYNVMITTKS-GKY 723
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST 326
+ ++ RT+P T S S+ L+V W G FD Y+V I +
Sbjct: 724 ENHSFSRERTVPSGVQGLTVSN-SARSDYLKVSWLHASG--SFDSYEVIIKNNNDFIQTK 780
Query: 327 PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+ K +E C + L PGR Y V V T SGK
Sbjct: 781 SVPKDENE---CVFTN-LVPGRQYSVTVSTRSGK 810
Score = 141 (54.7 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 67/278 (24%), Positives = 108/278 (38%)
Query: 85 SITTPPDPPTNLSVNVRSGK--TAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
++ T P PP +N + Q+ W P GK + + V S K
Sbjct: 107 TLQTDPLPPPRFEINKEKTTFTSLQVRWDPS-PGKVDLYNIVVFDHSNKKLQESSIPGRF 165
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
+ L PG Y + L +V +K + + T P+ P K I ++
Sbjct: 166 SKTEETFTGLVPGNKYNIVLTAVAGNKSTPEFRINGSTAVPS-PVKNIQVIVKTDSIHAS 224
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W P + YK+ + D +V E E P + F GL G YN+SV T +
Sbjct: 225 WSPG--SGHVDLYKLVLF--DNHGTVH--ESHQENPLTSYI-FSGLTAGHLYNLSVITQA 277
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
+ ST P L T + ++L+V W P G +F Y ++++ R
Sbjct: 278 AELESTAFRIVRTGPPAEVLDLTVTNDD-SFDTLKVKWRRPSGGVDF--YNITLSHLR-- 332
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
S + + T+ + L PGR YQ+ +T+SG+
Sbjct: 333 -SVKEVKTLQPAVTETHFDK-LTPGRLYQITARTISGE 368
Score = 133 (51.9 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 71/308 (23%), Positives = 123/308 (39%)
Query: 56 FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKT--AQIFWSPP 113
F+ PG Y + T S T+ +T P N++V+ +G T ++ W+P
Sbjct: 879 FTALTPGRLYKIVVL-TISGDAQRATFIEGLTIP-SAVRNINVSP-NGMTDSLKVSWTPG 935
Query: 114 ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS-KESV 172
G + + + + + R + + ++ DL G Y+V + S + S+
Sbjct: 936 -GGDVDSYTVTIFQQNHQLDSRSVS---KDVSEHTFHDLEAGEQYRVVVQSNSGALHNSL 991
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYV 231
A R T P + + + + +LLV WQ + P + Y + + E + +
Sbjct: 992 AAFGR---TIPASVQELLADHAYSSHSLLVSWQKA-PG-VAERYDILL----LNEQGVLL 1042
Query: 232 EKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASI 291
+ EP Q F+ L+PG+ Y I + TVS S RT+P + K
Sbjct: 1043 SNKSEPATAKQHKFEDLLPGKKYKIHILTVSGGLFSKRAETVGRTVPAAVTNLKVTKN-- 1100
Query: 292 TSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQ 351
T++ L W +G E D Y + + P S QC + L GR Y+
Sbjct: 1101 TTDQLSFSWTTSQG--ELDSYDIFLY--NPDKSLHDRISGEQHLQQCSF-QNLRQGRMYR 1155
Query: 352 VLVKTVSG 359
+++ T SG
Sbjct: 1156 MVIVTHSG 1163
>UNIPROTKB|F8VU56 [details] [associations]
symbol:PTPRB "Receptor-type tyrosine-protein phosphatase
beta" species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000772 Pfam:PF00652 SUPFAM:SSF50370 PROSITE:PS50231
GO:GO:0004725 GO:GO:0035335 EMBL:AC025569 EMBL:AC083809
HGNC:HGNC:9665 ChiTaRS:PTPRB IPI:IPI01021030
ProteinModelPortal:F8VU56 SMR:F8VU56 Ensembl:ENST00000550358
UCSC:uc001swa.4 ArrayExpress:F8VU56 Bgee:F8VU56 Uniprot:F8VU56
Length = 2127
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 75/277 (27%), Positives = 120/277 (43%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIF--WSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T PD NL N +G+ + WSPP +G + +++ + + S +G E
Sbjct: 593 TFPDKVANLEAN-NNGRMRSLVVSWSPP-AGDWEQYRILLFNDSVVLLNITVGKEETQ-- 648
Query: 146 GYSLKD--LTPGGSYQVQLFSVYDS-KESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
Y + D L PG Y+V++ + K S R T P + V NET+L ++
Sbjct: 649 -YVMDDTGLVPGRQYEVEVIVESGNLKNSERCQGR---TVPLAVLQLRVKHANETSLSIM 704
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
WQ P + + Y +S+ A +L + K + F LVPGR Y +V ++S
Sbjct: 705 WQT--PVAEWEKYIISL----ADRDLLLIHKSLSKDAK-EFTFTDLVPGRKYMATVTSIS 757
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
D + ++ + RT+P + +TS SL W +G EF YQV +
Sbjct: 758 GD-LKNSSSVKGRTVPAQVTDLHVANQGMTS-SLFTNWTQAQGDVEF--YQVLLIHENVV 813
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ I+ E ++ L+ G Y V+V TVSG
Sbjct: 814 IKNESISS---ETSRYSF-HSLKSGSLYSVVVTTVSG 846
Score = 164 (62.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 195 NETTLLVLWQPSYPAS-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
N T LW PAS + Y++ + P+ + + +K+ + F+GLVPGR
Sbjct: 1313 NRNTTDSLWFNWSPASGDFDFYELILYNPNGTKKENWKDKD-----LTEWRFQGLVPGRK 1367
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
Y + V T S D +S TA+ RT P P ++ A I + SL + W+ P +++++ ++
Sbjct: 1368 YVLWVVTHSGD-LSNKVTAESRTAPSPPSLMSF--ADIANTSLAITWKGPPDWTDYNDFE 1424
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ R P + E + GL PGR+YQ VKTVSG
Sbjct: 1425 LQWLPRDALTVFNPYNNRKSEGR---IVYGLRPGRSYQFNVKTVSG 1467
Score = 161 (61.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 76/300 (25%), Positives = 126/300 (42%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
G+KY+ + + + +T +T P P ++ ++ ++ I WS SG +
Sbjct: 394 GSKYNIAITAVSGGKRSFSVYTNG-STVPSPVKDIGISTKANSLL-ISWSHG-SGNVERY 450
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+L L +K G + Y+ LTPG Y + + + ++ Y + T
Sbjct: 451 RLM---LMDKGILVHGGVVDKHATSYAFHGLTPGYLYNLTVMTEAAGLQN--YRWKLVRT 505
Query: 182 KPNTPGKFIVWFRNE-TTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
P V T+L V WQ P ++ + Y +++ + E P
Sbjct: 506 APMEVSNLKVTNDGSLTSLKVKWQRP-PGNVDS-YNITLSHKGTIK-----ESRVLAPWI 558
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW 300
+ FK LVPGR Y ++V VS E+S A RT P + + + SL V W
Sbjct: 559 TETHFKELVPGRLYQVTVSCVS-GELSAQKMAVGRTFPDKVANLEANNNG-RMRSLVVSW 616
Query: 301 EPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSE-GLEPGRTYQVLVKTVSG 359
PP G ++++Y++ + IT ++E TQ M + GL PGR Y+V V SG
Sbjct: 617 SPPAG--DWEQYRILLF--NDSVVLLNITVGKEE-TQYVMDDTGLVPGRQYEVEVIVESG 671
Score = 147 (56.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 64/242 (26%), Positives = 104/242 (42%)
Query: 83 TASITTPPDPPTNLSVNV-RSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
T + T P PP V+ ++ T+ W P SGK + ++ + L ++ +I G
Sbjct: 321 TVVLQTDPLPPARFGVSKEKTTSTSLHVWWTPSSGKVTSYE---VQLFDENNQKIQGVQI 377
Query: 142 NPPAG---YSLKDLTPGGSYQVQLFSVYDSKESVA-YTSRNFTTKPNTPGKFIVWFRNET 197
Y+ +LT G Y + + +V K S + YT N +T P+ P K I
Sbjct: 378 QESTSWNEYTFFNLTAGSKYNIAITAVSGGKRSFSVYT--NGSTVPS-PVKDIGISTKAN 434
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
+LL+ W S+ + Y++ + V+K AF GL PG YN++
Sbjct: 435 SLLISW--SHGSGNVERYRLMLMDKGILVHGGVVDKHA-----TSYAFHGLTPGYLYNLT 487
Query: 258 VQTVSEDEISTPTTAQYRTIPLRP--LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
V T + + RT P+ L T D S+TS L+V W+ P G D Y ++
Sbjct: 488 VMTEAAG-LQNYRWKLVRTAPMEVSNLKVTND-GSLTS--LKVKWQRPPG--NVDSYNIT 541
Query: 316 IN 317
++
Sbjct: 542 LS 543
Score = 145 (56.1 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 75/318 (23%), Positives = 127/318 (39%)
Query: 46 VSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT--TPPDPPTNLSVNVRSG 103
+S+D K+ F++ +PG KY T +++ L ++S+ T P T+L V G
Sbjct: 731 LSKDAKE-FTFTDLVPGRKY----MATVTSISGDLKNSSSVKGRTVPAQVTDLHV-ANQG 784
Query: 104 KTAQIF--WSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161
T+ +F W+ G +++ +I + I + + YS L G Y V
Sbjct: 785 MTSSLFTNWTQA-QGDVEFYQVLLIHENVVIKNESIS---SETSRYSFHSLKSGSLYSVV 840
Query: 162 LFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP 221
+ +V S T G + L V W + + HY+V+I
Sbjct: 841 VTTVSGGISSRQVVVEGRTVPDKVQGVSVSNSARSDYLRVSWV--HATGDFDHYEVTIKN 898
Query: 222 PDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
+ +++ + P + F LVPGR Y+++V T S + RTIP
Sbjct: 899 KNN-----FIQTKSIPKSENECVFVQLVPGRLYSVTVTTKS-GQYEANEQGNGRTIPEPV 952
Query: 282 LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS 341
T S + L V W G + D+Y++ + P + T+ +
Sbjct: 953 KDLTLRNRS--TEDLHVTWSGANG--DVDQYEIQLLFN--DMKVFPPFHLVNTATEYRFT 1006
Query: 342 EGLEPGRTYQVLVKTVSG 359
L PGR Y++LV T+SG
Sbjct: 1007 S-LTPGRQYKILVLTISG 1023
Score = 139 (54.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 68/280 (24%), Positives = 112/280 (40%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T P+P +L++ RS + + WS +G ++++++ K P N Y
Sbjct: 947 TIPEPVKDLTLRNRSTEDLHVTWSGA-NGDVDQYEIQLLFNDMKVFPPF--HLVNTATEY 1003
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQP- 205
LTPG Y++ + ++ + A+ FT P+ + T +L V W P
Sbjct: 1004 RFTSLTPGRQYKILVLTISGDVQQSAFIE-GFTV-PSAVKNIHISPNGATDSLTVNWTPG 1061
Query: 206 -----SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
SY S + H + +D P+ V + F L G Y I + +
Sbjct: 1062 GGDVDSYTVSAFRHSQ-KVDSQTIPKHVF------------EHTFHRLEAGEQYQIMIAS 1108
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSE-FDKYQVSINVR 319
VS + RT+P D A +S SL V W+ G +E +D ++ N
Sbjct: 1109 VS-GSLKNQINVVGRTVPASVQGVIADNA-YSSYSLIVSWQKAAGVAERYDILLLTENGI 1166
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+S P T T+ E L PG+ Y++ + TVSG
Sbjct: 1167 LLRNTSEPAT------TKQHKFEDLTPGKKYKIQILTVSG 1200
Score = 132 (51.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 64/238 (26%), Positives = 101/238 (42%)
Query: 125 VISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY-DSKESVAYTSRNFTTKP 183
+ISL+++ I ++ DL PG Y + S+ D K S + R T P
Sbjct: 716 IISLADRDLLLIHKSLSKDAKEFTFTDLVPGRKYMATVTSISGDLKNSSSVKGR---TVP 772
Query: 184 NTPGKFIVWFRNETT-LLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
V + T+ L W + + Y+V + E+V+ ++ E ++
Sbjct: 773 AQVTDLHVANQGMTSSLFTNWTQAQGDVEF--YQVLL----IHENVV-IKNESISSETSR 825
Query: 243 AAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEP 302
+F L G Y++ V TVS S + RT+P + + S S+ LRV W
Sbjct: 826 YSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPDKVQGVSVSN-SARSDYLRVSWVH 884
Query: 303 PKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
G +FD Y+V+I + + I KS +E C + L PGR Y V V T SG+
Sbjct: 885 ATG--DFDHYEVTIKNKNNFIQTKSIPKSENE---CVFVQ-LVPGRLYSVTVTTKSGQ 936
Score = 125 (49.1 bits), Expect = 0.00047, P = 0.00047
Identities = 65/308 (21%), Positives = 116/308 (37%)
Query: 56 FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTA-QIFWSPPI 114
F+ PG +Y + + V + T P N+ ++ + + W+P
Sbjct: 1005 FTSLTPGRQYKILVLTISGDVQQ-SAFIEGFTVP-SAVKNIHISPNGATDSLTVNWTPG- 1061
Query: 115 SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS-KESVA 173
G + + S+K + I ++ L G YQ+ + SV S K +
Sbjct: 1062 GGDVDSYTVSAFRHSQKVDSQTI---PKHVFEHTFHRLEAGEQYQIMIASVSGSLKNQIN 1118
Query: 174 YTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK 233
R T + G + +L+V WQ + A + Y + + E+ + +
Sbjct: 1119 VVGR--TVPASVQGVIADNAYSSYSLIVSWQKA--AGVAERYDILL----LTENGILLRN 1170
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
EP Q F+ L PG+ Y I + TVS S + RT+P + S
Sbjct: 1171 TSEPATTKQHKFEDLTPGKKYKIQILTVSGGLFSKEAQTEGRTVPAAVTDLRITENSTRH 1230
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQV 352
S R W +G E Y + + P + +++ +P S + L GR Y++
Sbjct: 1231 LSFR--WTASEG--ELSWYNIFLY--NPDGNLQE--RAQVDPLVQSFSFQNLLQGRMYKM 1282
Query: 353 LVKTVSGK 360
++ T SG+
Sbjct: 1283 VIVTHSGE 1290
>UNIPROTKB|F1N8F4 [details] [associations]
symbol:TNC "Tenascin" species:9031 "Gallus gallus"
[GO:0005604 "basement membrane" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IEA] [GO:0045545 "syndecan
binding" evidence=IEA] [GO:0060739 "mesenchymal-epithelial cell
signaling involved in prostate gland development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009611 GO:GO:0008284 SUPFAM:SSF49265 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0010628 GO:GO:0005604
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 GO:GO:0005614 InterPro:IPR013111 Pfam:PF07974
Pfam:PF12661 UniGene:Gga.3818 UniGene:Gga.51524 CTD:3371 KO:K06252
OMA:GQRSCPN GeneTree:ENSGT00690000102056 EMBL:AADN02026872
IPI:IPI00587380 RefSeq:NP_990787.2 Ensembl:ENSGALT00000011523
GeneID:396440 KEGG:gga:396440 NextBio:20816481 Uniprot:F1N8F4
Length = 1808
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 80/311 (25%), Positives = 129/311 (41%)
Query: 59 GL-PGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG +Y+ L+ N+T L+ ITT D P+ + + TA I WS P++
Sbjct: 743 GLAPGQQYNVSLHIVKNNTRGPGLSRV--ITTKLDAPSQIEAKDVTDTTALITWSKPLA- 799
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ G +L I +E+ YS+ +L P Y+V L S ES
Sbjct: 800 EIEGIELTYGPKDVPGDRTTIDLSEDENQ-YSIGNLRPHTEYEVILISRRGDMESDP-AK 857
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE 236
F T + P + + ++ + W+ S+ A+I +Y++ P + +G
Sbjct: 858 EVFVTDLDAPRNLKRVSQTDNSITLEWKNSH-ANI-DNYRIKFAPISGGDHTELTVPKGN 915
Query: 237 PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
+A GL PG Y I V V +D S P T T P + T+ SL
Sbjct: 916 Q-ATTRATLTGLRPGTEYGIGVTAVRQDRESAPATINAGTDLDNPKDLEVSDPTETTLSL 974
Query: 297 RVVWEPPKGFSEFDKYQVSI--------NVRRPGASSTPITKSRDEPTQCDMSEGLEPGR 348
R W P ++FD+Y+++ V P S++ I + D T+ +S E GR
Sbjct: 975 R--WRRP--VAKFDRYRLTYVSPSGKKNEVEIPVDSTSFILRGLDAGTEYTISLVAEKGR 1030
Query: 349 TYQVLVKTVSG 359
++ T+ G
Sbjct: 1031 -HKSKPTTIKG 1040
Score = 142 (55.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 75/305 (24%), Positives = 121/305 (39%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTW--TASITTPPDPPT-NLSVNVRSGKTAQIFWSPPI 114
GL P T + YLY + H + T +A+ TT +P NL V+ + ++ W+
Sbjct: 1195 GLSPSTDFIVYLYGIS---HGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTAD- 1250
Query: 115 SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAY 174
G + F LK+ K+ P + + + L G Y+++L+ V + S
Sbjct: 1251 DGVFDSFVLKIRDTKRKSDPLEL-IVPGHERTHDITGLKEGTEYEIELYGVSSGRRSQPI 1309
Query: 175 TSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP-PDAPESVLYVEK 233
S TT +P E + V W P P S Y+VS P +V+ V+
Sbjct: 1310 NSVA-TTVVGSPKGISFSDITENSATVSWTP--PRSRVDSYRVSYVPITGGTPNVVTVD- 1365
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
G + LVPG YN+++ +V E S P + +T P +IT
Sbjct: 1366 -GSK---TRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALDSPSGLVV--MNITD 1419
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPT-QCDMSEGLEPGRTYQV 352
+ W+P + D Y VS + +T+ T + D++ GL P Y +
Sbjct: 1420 SEALATWQP--AIAAVDNYIVSYS----SEDEPEVTQMVSGNTVEYDLN-GLRPATEYTL 1472
Query: 353 LVKTV 357
V V
Sbjct: 1473 RVHAV 1477
Score = 127 (49.8 bits), Expect = 0.00024, P = 0.00024
Identities = 49/236 (20%), Positives = 92/236 (38%)
Query: 27 TYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86
+YR+ Y+P G P N V K + + +PG Y+ + + + +
Sbjct: 1346 SYRVSYVPITGGTP-NVVTVDGS-KTRTKLVKLVPGVDYNVNIISVKG-FEESEPISGIL 1402
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T D P+ L V + A W P I+ + ++S S + P +
Sbjct: 1403 KTALDSPSGLVVMNITDSEALATWQPAIAA-VDNY---IVSYSSEDEPEVTQMVSGNTVE 1458
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
Y L L P Y +++ +V D+++S +++ FTT + P T ++ W+P
Sbjct: 1459 YDLNGLRPATEYTLRVHAVKDAQKSETLSTQ-FTTGLDAPKDLSATEVQSETAVITWRP- 1516
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
P + T Y ++ + D + ++ P L P Y + +Q +S
Sbjct: 1517 -PRAPVTDYLLTYESIDGRVKEVILD-----PETTSYTLTELSPSTQYTVKLQALS 1566
Score = 124 (48.7 bits), Expect = 0.00050, P = 0.00050
Identities = 61/270 (22%), Positives = 111/270 (41%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPP-ISGKYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSL 149
PPT L+V + KT + W + +Y V + + + FT ++
Sbjct: 595 PPTELTVTNVTDKTVNLEWKHENLVNEYL-----VTYVPTSSGGLDLQFTVPGNQTSATI 649
Query: 150 KDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP---S 206
+L PG Y +++F++ +K+S+ ++R T P G R ET++ V W P S
Sbjct: 650 HELEPGVEYFIRVFAILKNKKSIPVSARVATYLPAPEGLKFKSVR-ETSVQVEWDPLSIS 708
Query: 207 YPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
+ ++ + + D D S+ E PG L PG+ YN+S+ V ++
Sbjct: 709 FDGWELVFRNMQKKDDNGDITSSLKRPETSYMQPG--------LAPGQQYNVSLHIV-KN 759
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS 324
P ++ T L S + +T + + W P +E + +++ +
Sbjct: 760 NTRGPGLSRVITTKLDAPS-QIEAKDVTDTTALITWSKP--LAEIEGIELTYGPKDVPGD 816
Query: 325 STPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
T I S DE Q + L P Y+V++
Sbjct: 817 RTTIDLSEDE-NQYSIGN-LRPHTEYEVIL 844
>UNIPROTKB|P10039 [details] [associations]
symbol:TNC "Tenascin" species:9031 "Gallus gallus"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0005578 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 Gene3D:3.90.215.10
Gene3D:4.10.530.10 InterPro:IPR014716 InterPro:IPR014715
Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS00514
PROSITE:PS51406 InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661
EMBL:M23121 EMBL:X08031 EMBL:X08030 EMBL:J03641 EMBL:M20816
IPI:IPI00582445 IPI:IPI00596535 IPI:IPI01017282 PIR:A31930
UniGene:Gga.3818 UniGene:Gga.51524 PDB:1QR4 PDBsum:1QR4
ProteinModelPortal:P10039 SMR:P10039 IntAct:P10039 STRING:P10039
HOVERGEN:HBG008949 InParanoid:P10039 OrthoDB:EOG4MSCX9
EvolutionaryTrace:P10039 Uniprot:P10039
Length = 1808
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 81/311 (26%), Positives = 131/311 (42%)
Query: 59 GL-PGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG +Y+ L+ N+T L+ ITT D P+ + + TA I WS P++
Sbjct: 743 GLAPGQQYNVSLHIVKNNTRGPGLSRV--ITTKLDAPSQIEAKDVTDTTALITWSKPLA- 799
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS 176
+ G +L I +E+ YS+ +L P Y+V L S ES
Sbjct: 800 EIEGIELTYGPKDVPGDRTTIDLSEDENQ-YSIGNLRPHTEYEVTLISRRGDMESDP-AK 857
Query: 177 RNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE 236
F T + P + + ++ + W+ S+ A+I +Y++ P + +G
Sbjct: 858 EVFVTDLDAPRNLKRVSQTDNSITLEWKNSH-ANI-DNYRIKFAPISGGDHTELTVPKGN 915
Query: 237 PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
+A GL PG Y I V V +D S P T T P + T+ SL
Sbjct: 916 Q-ATTRATLTGLRPGTEYGIGVTAVRQDRESAPATINAGTDLDNPKDLEVSDPTETTLSL 974
Query: 297 RVVWEPPKGFSEFDKYQ---VSINVRR-----PGASSTPITKSRDEPTQCDMSEGLEPGR 348
R W P ++FD+Y+ VS + ++ P S++ I + D T+ +S E GR
Sbjct: 975 R--WRRP--VAKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGR 1030
Query: 349 TYQVLVKTVSG 359
++ T+ G
Sbjct: 1031 -HKSKPTTIKG 1040
Score = 142 (55.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 75/305 (24%), Positives = 121/305 (39%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTW--TASITTPPDPPT-NLSVNVRSGKTAQIFWSPPI 114
GL P T + YLY + H + T +A+ TT +P NL V+ + ++ W+
Sbjct: 1195 GLSPSTDFIVYLYGIS---HGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTAD- 1250
Query: 115 SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAY 174
G + F LK+ K+ P + + + L G Y+++L+ V + S
Sbjct: 1251 DGVFDSFVLKIRDTKRKSDPLEL-IVPGHERTHDITGLKEGTEYEIELYGVSSGRRSQPI 1309
Query: 175 TSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP-PDAPESVLYVEK 233
S TT +P E + V W P P S Y+VS P +V+ V+
Sbjct: 1310 NSVA-TTVVGSPKGISFSDITENSATVSWTP--PRSRVDSYRVSYVPITGGTPNVVTVD- 1365
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
G + LVPG YN+++ +V E S P + +T P +IT
Sbjct: 1366 -GSK---TRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALDSPSGLVV--MNITD 1419
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPT-QCDMSEGLEPGRTYQV 352
+ W+P + D Y VS + +T+ T + D++ GL P Y +
Sbjct: 1420 SEALATWQP--AIAAVDNYIVSYS----SEDEPEVTQMVSGNTVEYDLN-GLRPATEYTL 1472
Query: 353 LVKTV 357
V V
Sbjct: 1473 RVHAV 1477
Score = 127 (49.8 bits), Expect = 0.00024, P = 0.00024
Identities = 49/236 (20%), Positives = 92/236 (38%)
Query: 27 TYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86
+YR+ Y+P G P N V K + + +PG Y+ + + + +
Sbjct: 1346 SYRVSYVPITGGTP-NVVTVDGS-KTRTKLVKLVPGVDYNVNIISVKG-FEESEPISGIL 1402
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T D P+ L V + A W P I+ + ++S S + P +
Sbjct: 1403 KTALDSPSGLVVMNITDSEALATWQPAIAA-VDNY---IVSYSSEDEPEVTQMVSGNTVE 1458
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
Y L L P Y +++ +V D+++S +++ FTT + P T ++ W+P
Sbjct: 1459 YDLNGLRPATEYTLRVHAVKDAQKSETLSTQ-FTTGLDAPKDLSATEVQSETAVITWRP- 1516
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
P + T Y ++ + D + ++ P L P Y + +Q +S
Sbjct: 1517 -PRAPVTDYLLTYESIDGRVKEVILD-----PETTSYTLTELSPSTQYTVKLQALS 1566
>UNIPROTKB|F1SKM1 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:CU633242 Ensembl:ENSSSCT00000012432 ArrayExpress:F1SKM1
Uniprot:F1SKM1
Length = 2939
Score = 168 (64.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 88/345 (25%), Positives = 148/345 (42%)
Query: 20 NLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHD 78
NL + YRL++ G P + D+ + + +GL PGT+Y LY T +
Sbjct: 436 NLVPEARGYRLEWRRESGLEVPQKVVLPSDVT-HYQL-DGLQPGTEYRLTLY-TLLEGRE 492
Query: 79 WLTWTASITTPPDPPTNLSVNVRS----GKTAQIFWSP-PISGKYSGFKLKVISLSEKTP 133
T + T P+ P +++++ G+ ++ WSP P + +Y ++ S +
Sbjct: 493 VATPATVVPTGPELPVGPVMDLQATELPGQRVRVSWSPVPSATEY-----RITMRSTQGV 547
Query: 134 PRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVA--YTSRNFTTKP-NTPGKFI 190
R + + A + L D+ G SY V++ + ++E A T R P PG +
Sbjct: 548 ERTLVLPGSQTA-FDLDDVRAGLSYTVRVSARVGAREGSASVLTVRREPEAPLAVPGLRV 606
Query: 191 VWFRNETTLL-VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
V ++TT + V W P AS +++S + ESV + PP GL
Sbjct: 607 V--ASDTTRVRVAWGPVPGAS---GFRISWRTDNGLESVQTL-----PPEATATDITGLR 656
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEF 309
PG +Y ++V + E P RT P+ P+ T TS+S+ + W G +
Sbjct: 657 PGTSYQVAVSALRGREEGLPAVIVARTDPVDPVR-TVRVTQATSSSVTITWNRVPGATG- 714
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
Y+VS + G + + E T ++ +GLEP Y V V
Sbjct: 715 --YRVSWHSGH-GPEKSQLVSG--ETTVAEL-DGLEPDTEYTVRV 753
>UNIPROTKB|P32018 [details] [associations]
symbol:COL14A1 "Collagen alpha-1(XIV) chain" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] InterPro:IPR002035 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0007155 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
PROSITE:PS50025 SMART:SM00210 HOVERGEN:HBG051060 EMBL:X70793
EMBL:X70792 EMBL:X66138 EMBL:X65122 IPI:IPI00601719 PIR:A45974
PIR:S31212 PIR:S78476 RefSeq:NP_990665.1 UniGene:Gga.13901 PDB:1B9P
PDB:1B9Q PDBsum:1B9P PDBsum:1B9Q ProteinModelPortal:P32018
SMR:P32018 PRIDE:P32018 GeneID:396276 KEGG:gga:396276 CTD:7373
eggNOG:NOG307460 InParanoid:P32018 KO:K08133
EvolutionaryTrace:P32018 NextBio:20816327 Uniprot:P32018
Length = 1888
Score = 166 (63.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 60/222 (27%), Positives = 101/222 (45%)
Query: 54 IEFSEGLPGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSP 112
+E LP T+Y +Y D LT + T P PP+NL + +A++ W P
Sbjct: 499 LELDGLLPNTEYTVTVYAMFGEEASDPLTGQET-TLPLSPPSNLKFSDVGHNSAKLTWDP 557
Query: 113 PISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV 172
S G+++ + ++ T + P + ++LK LT Y V +FS+YD +S
Sbjct: 558 A-SKNVKGYRIMYVK-TDGTETNEVEV--GPVSTHTLKSLTALTEYTVAIFSLYDEGQSE 613
Query: 173 AYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYV 231
T +FTT+ P + + T + V W+P+ +S Y+++ P D ES
Sbjct: 614 PLTG-SFTTRKVPPPQHLEVDEASTDSFRVSWKPT--SSDIAFYRLAWIPLDGGES---- 666
Query: 232 EKEGEPPGPAQA-AFKGLVPGRAYNISVQTVSEDEISTPTTA 272
+E G A + +GL+P Y +S+ V +DE + A
Sbjct: 667 -EEVVLSGDADSYVIEGLLPNTEYEVSLLAVFDDETESEVVA 707
Score = 106 (42.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 29/81 (35%), Positives = 42/81 (51%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVI-SLSEKTPPRIIGFTENPPAGYSLK 150
PPT L NV + + QI W P G++SG+KL V S KT I+ +N ++
Sbjct: 32 PPTRLRYNVVNPDSVQISWKAP-KGQFSGYKLLVTPSSGGKTNQLIL---QNTATKAIIQ 87
Query: 151 DLTPGGSYQVQLFSVYDSKES 171
L P +Y +Q+ + D KES
Sbjct: 88 GLIPDQNYALQIIAFSDDKES 108
Score = 67 (28.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 37/152 (24%), Positives = 58/152 (38%)
Query: 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP-- 237
TT TP I FR LV+ +S+ + +S D V Y+ +G+
Sbjct: 728 TTTATTPKPTIAVFRTGVRNLVI-DDETTSSLRVVWDIS-DHNAQQFRVTYLTAKGDRAE 785
Query: 238 -----PGPAQAAF-KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLR-PLSFTYDKAS 290
PG + L+P Y +++ + D +A +T+PL P +
Sbjct: 786 EAIMVPGRQNTLLLQPLLPDTEYKVTITPIYADGEGVSVSAPGKTLPLSAPRNLRVSDEW 845
Query: 291 ITSNSLRVVWE-PPKGFSEFDKYQVSINVRRP 321
N LR+ W+ PP + SINV P
Sbjct: 846 Y--NRLRISWDAPPSPTMGYRIVYKSINVPGP 875
>UNIPROTKB|P23467 [details] [associations]
symbol:PTPRB "Receptor-type tyrosine-protein phosphatase
beta" species:9606 "Homo sapiens" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0016311 "dephosphorylation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005001
"transmembrane receptor protein tyrosine phosphatase activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006470 "protein dephosphorylation" evidence=TAS]
[GO:0006796 "phosphate-containing compound metabolic process"
evidence=TAS] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 EMBL:CH471054
GO:GO:0001525 eggNOG:COG5599 GO:GO:0005001 EMBL:X54131
EMBL:BX648245 EMBL:AC025569 EMBL:AC083809 EMBL:BC101679
EMBL:BC113463 EMBL:BC143360 IPI:IPI00745991 IPI:IPI00943305
IPI:IPI00954453 PIR:S12050 RefSeq:NP_001103224.1
RefSeq:NP_001193900.1 RefSeq:NP_001193901.1 RefSeq:NP_002828.3
UniGene:Hs.434375 PDB:2AHS PDB:2H02 PDB:2H03 PDB:2H04 PDB:2HC1
PDB:2HC2 PDB:2I3R PDB:2I3U PDB:2I4E PDB:2I4G PDB:2I4H PDB:2I5X
PDBsum:2AHS PDBsum:2H02 PDBsum:2H03 PDBsum:2H04 PDBsum:2HC1
PDBsum:2HC2 PDBsum:2I3R PDBsum:2I3U PDBsum:2I4E PDBsum:2I4G
PDBsum:2I4H PDBsum:2I5X ProteinModelPortal:P23467 SMR:P23467
IntAct:P23467 MINT:MINT-1349770 STRING:P23467 PhosphoSite:P23467
DMDM:281185481 PaxDb:P23467 PRIDE:P23467 Ensembl:ENST00000261266
Ensembl:ENST00000334414 Ensembl:ENST00000550857 GeneID:5787
KEGG:hsa:5787 UCSC:uc001swb.4 UCSC:uc001swc.4 UCSC:uc010stp.2
CTD:5787 GeneCards:GC12M070910 H-InvDB:HIX0017674
H-InvDB:HIX0037045 HGNC:HGNC:9665 HPA:CAB004782 MIM:176882
neXtProt:NX_P23467 PharmGKB:PA34010 HOGENOM:HOG000060224
HOVERGEN:HBG053759 InParanoid:P23467 KO:K05694 OMA:FTVNCSW
ChEMBL:CHEMBL2706 ChiTaRS:PTPRB EvolutionaryTrace:P23467
GenomeRNAi:5787 NextBio:22514 ArrayExpress:P23467 Bgee:P23467
CleanEx:HS_PTPRB Genevestigator:P23467 GermOnline:ENSG00000127329
Uniprot:P23467
Length = 1997
Score = 164 (62.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 195 NETTLLVLWQPSYPAS-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
N T LW PAS + Y++ + P+ + + +K+ + F+GLVPGR
Sbjct: 1183 NRNTTDSLWFNWSPASGDFDFYELILYNPNGTKKENWKDKD-----LTEWRFQGLVPGRK 1237
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
Y + V T S D +S TA+ RT P P ++ A I + SL + W+ P +++++ ++
Sbjct: 1238 YVLWVVTHSGD-LSNKVTAESRTAPSPPSLMSF--ADIANTSLAITWKGPPDWTDYNDFE 1294
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ R P + E + GL PGR+YQ VKTVSG
Sbjct: 1295 LQWLPRDALTVFNPYNNRKSEGR---IVYGLRPGRSYQFNVKTVSG 1337
Score = 161 (61.7 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 76/300 (25%), Positives = 126/300 (42%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
G+KY+ + + + +T +T P P ++ ++ ++ I WS SG +
Sbjct: 176 GSKYNIAITAVSGGKRSFSVYTNG-STVPSPVKDIGISTKANSLL-ISWSHG-SGNVERY 232
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+L L +K G + Y+ LTPG Y + + + ++ Y + T
Sbjct: 233 RLM---LMDKGILVHGGVVDKHATSYAFHGLTPGYLYNLTVMTEAAGLQN--YRWKLVRT 287
Query: 182 KPNTPGKFIVWFRNE-TTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
P V T+L V WQ P ++ + Y +++ + E P
Sbjct: 288 APMEVSNLKVTNDGSLTSLKVKWQRP-PGNVDS-YNITLSHKGTIK-----ESRVLAPWI 340
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW 300
+ FK LVPGR Y ++V VS E+S A RT P + + + SL V W
Sbjct: 341 TETHFKELVPGRLYQVTVSCVS-GELSAQKMAVGRTFPDKVANLEANNNG-RMRSLVVSW 398
Query: 301 EPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSE-GLEPGRTYQVLVKTVSG 359
PP G ++++Y++ + IT ++E TQ M + GL PGR Y+V V SG
Sbjct: 399 SPPAG--DWEQYRILLF--NDSVVLLNITVGKEE-TQYVMDDTGLVPGRQYEVEVIVESG 453
Score = 147 (56.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 64/242 (26%), Positives = 104/242 (42%)
Query: 83 TASITTPPDPPTNLSVNV-RSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
T + T P PP V+ ++ T+ W P SGK + ++ + L ++ +I G
Sbjct: 103 TVVLQTDPLPPARFGVSKEKTTSTSLHVWWTPSSGKVTSYE---VQLFDENNQKIQGVQI 159
Query: 142 NPPAG---YSLKDLTPGGSYQVQLFSVYDSKESVA-YTSRNFTTKPNTPGKFIVWFRNET 197
Y+ +LT G Y + + +V K S + YT N +T P+ P K I
Sbjct: 160 QESTSWNEYTFFNLTAGSKYNIAITAVSGGKRSFSVYT--NGSTVPS-PVKDIGISTKAN 216
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
+LL+ W S+ + Y++ + V+K AF GL PG YN++
Sbjct: 217 SLLISW--SHGSGNVERYRLMLMDKGILVHGGVVDKHA-----TSYAFHGLTPGYLYNLT 269
Query: 258 VQTVSEDEISTPTTAQYRTIPLRP--LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
V T + + RT P+ L T D S+TS L+V W+ P G D Y ++
Sbjct: 270 VMTEAAG-LQNYRWKLVRTAPMEVSNLKVTND-GSLTS--LKVKWQRPPG--NVDSYNIT 323
Query: 316 IN 317
++
Sbjct: 324 LS 325
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 57/214 (26%), Positives = 88/214 (41%)
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
YS L G Y V + +V S T + G + L V W +
Sbjct: 608 YSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSGRNDYLSVSWLLA 667
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
P + +Y+V++ L + K + +F L PGR Y +++ T S +
Sbjct: 668 -PGDV-DNYEVTLSHDGKVVQSLVIAKSVR-----ECSFSSLTPGRLYTVTITTRS-GKY 719
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST 326
+ +Q RT+P + + S S+ LRV W G +FD Y+V+I + +
Sbjct: 720 ENHSFSQERTVPDKVQGVSVSN-SARSDYLRVSWVHATG--DFDHYEVTIKNKNNFIQTK 776
Query: 327 PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
I KS +E C + L PGR Y V V T SG+
Sbjct: 777 SIPKSENE---CVFVQ-LVPGRLYSVTVTTKSGQ 806
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 68/280 (24%), Positives = 112/280 (40%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T P+P +L++ RS + + WS +G ++++++ K P N Y
Sbjct: 817 TIPEPVKDLTLRNRSTEDLHVTWSGA-NGDVDQYEIQLLFNDMKVFPPF--HLVNTATEY 873
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQP- 205
LTPG Y++ + ++ + A+ FT P+ + T +L V W P
Sbjct: 874 RFTSLTPGRQYKILVLTISGDVQQSAFIE-GFTV-PSAVKNIHISPNGATDSLTVNWTPG 931
Query: 206 -----SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
SY S + H + +D P+ V + F L G Y I + +
Sbjct: 932 GGDVDSYTVSAFRHSQ-KVDSQTIPKHVF------------EHTFHRLEAGEQYQIMIAS 978
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSE-FDKYQVSINVR 319
VS + RT+P D A +S SL V W+ G +E +D ++ N
Sbjct: 979 VS-GSLKNQINVVGRTVPASVQGVIADNA-YSSYSLIVSWQKAAGVAERYDILLLTENGI 1036
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+S P T T+ E L PG+ Y++ + TVSG
Sbjct: 1037 LLRNTSEPAT------TKQHKFEDLTPGKKYKIQILTVSG 1070
Score = 131 (51.2 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 53/212 (25%), Positives = 86/212 (40%)
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207
S LTPG Y V + + E+ ++ S+ T G + L V W +
Sbjct: 698 SFSSLTPGRLYTVTITTRSGKYENHSF-SQERTVPDKVQGVSVSNSARSDYLRVSWV--H 754
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIS 267
+ HY+V+I + +++ + P + F LVPGR Y+++V T S +
Sbjct: 755 ATGDFDHYEVTIKNKNN-----FIQTKSIPKSENECVFVQLVPGRLYSVTVTTKS-GQYE 808
Query: 268 TPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP 327
RTIP T S + L V W G + D+Y++ + P
Sbjct: 809 ANEQGNGRTIPEPVKDLTLRNRS--TEDLHVTWSGANG--DVDQYEIQLLFN--DMKVFP 862
Query: 328 ITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ T+ + L PGR Y++LV T+SG
Sbjct: 863 PFHLVNTATEYRFTS-LTPGRQYKILVLTISG 893
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 69/302 (22%), Positives = 121/302 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
+PG +Y+ + + + + + T P L V + + I W P++ ++
Sbjct: 439 VPGRQYEVEVIVESGNLKN--SERCQGRTVPLAVLQLRVKHANETSLSIMWQTPVA-EWE 495
Query: 120 GFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY-DSKESVAYTSRN 178
+ +ISL+++ I ++ DL PG Y + S+ D K S + R
Sbjct: 496 KY---IISLADRDLLLIHKSLSKDAKEFTFTDLVPGRKYMATVTSISGDLKNSSSVKGR- 551
Query: 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
T + ++L W + + Y+V + E+V+ ++ E
Sbjct: 552 -TVPAQVTDLHVANQGMTSSLFTNWTQAQGDVEF--YQVLL----IHENVV-IKNESISS 603
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
++ +F L G Y++ V TVS S + RT+P T + + ++ L V
Sbjct: 604 ETSRYSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSG-RNDYLSV 662
Query: 299 VWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
W G + D Y+V+++ S I KS E C S L PGR Y V + T S
Sbjct: 663 SWLLAPG--DVDNYEVTLSHDGKVVQSLVIAKSVRE---CSFSS-LTPGRLYTVTITTRS 716
Query: 359 GK 360
GK
Sbjct: 717 GK 718
Score = 125 (49.1 bits), Expect = 0.00044, P = 0.00044
Identities = 65/308 (21%), Positives = 116/308 (37%)
Query: 56 FSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTA-QIFWSPPI 114
F+ PG +Y + + V + T P N+ ++ + + W+P
Sbjct: 875 FTSLTPGRQYKILVLTISGDVQQ-SAFIEGFTVP-SAVKNIHISPNGATDSLTVNWTPG- 931
Query: 115 SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS-KESVA 173
G + + S+K + I ++ L G YQ+ + SV S K +
Sbjct: 932 GGDVDSYTVSAFRHSQKVDSQTI---PKHVFEHTFHRLEAGEQYQIMIASVSGSLKNQIN 988
Query: 174 YTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK 233
R T + G + +L+V WQ + A + Y + + E+ + +
Sbjct: 989 VVGR--TVPASVQGVIADNAYSSYSLIVSWQKA--AGVAERYDILL----LTENGILLRN 1040
Query: 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
EP Q F+ L PG+ Y I + TVS S + RT+P + S
Sbjct: 1041 TSEPATTKQHKFEDLTPGKKYKIQILTVSGGLFSKEAQTEGRTVPAAVTDLRITENSTRH 1100
Query: 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQV 352
S R W +G E Y + + P + +++ +P S + L GR Y++
Sbjct: 1101 LSFR--WTASEG--ELSWYNIFLY--NPDGNLQE--RAQVDPLVQSFSFQNLLQGRMYKM 1152
Query: 353 LVKTVSGK 360
++ T SG+
Sbjct: 1153 VIVTHSGE 1160
>UNIPROTKB|F5H3G6 [details] [associations]
symbol:PTPRB "Receptor-type tyrosine-protein phosphatase
beta" species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0004725 GO:GO:0035335 EMBL:AC025569 EMBL:AC083809
RefSeq:NP_001193901.1 UniGene:Hs.434375 GeneID:5787 KEGG:hsa:5787
CTD:5787 HGNC:HGNC:9665 KO:K05694 ChiTaRS:PTPRB GenomeRNAi:5787
NextBio:22514 IPI:IPI00922867 ProteinModelPortal:F5H3G6 SMR:F5H3G6
Ensembl:ENST00000538708 UCSC:uc010sto.2 ArrayExpress:F5H3G6
Bgee:F5H3G6 Uniprot:F5H3G6
Length = 1907
Score = 164 (62.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 195 NETTLLVLWQPSYPAS-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
N T LW PAS + Y++ + P+ + + +K+ + F+GLVPGR
Sbjct: 1093 NRNTTDSLWFNWSPASGDFDFYELILYNPNGTKKENWKDKD-----LTEWRFQGLVPGRK 1147
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
Y + V T S D +S TA+ RT P P ++ A I + SL + W+ P +++++ ++
Sbjct: 1148 YVLWVVTHSGD-LSNKVTAESRTAPSPPSLMSF--ADIANTSLAITWKGPPDWTDYNDFE 1204
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ R P + E + GL PGR+YQ VKTVSG
Sbjct: 1205 LQWLPRDALTVFNPYNNRKSEGR---IVYGLRPGRSYQFNVKTVSG 1247
Score = 161 (61.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 76/300 (25%), Positives = 126/300 (42%)
Query: 62 GTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGF 121
G+KY+ + + + +T +T P P ++ ++ ++ I WS SG +
Sbjct: 176 GSKYNIAITAVSGGKRSFSVYTNG-STVPSPVKDIGISTKANSLL-ISWSHG-SGNVERY 232
Query: 122 KLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+L L +K G + Y+ LTPG Y + + + ++ Y + T
Sbjct: 233 RLM---LMDKGILVHGGVVDKHATSYAFHGLTPGYLYNLTVMTEAAGLQN--YRWKLVRT 287
Query: 182 KPNTPGKFIVWFRNE-TTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
P V T+L V WQ P ++ + Y +++ + E P
Sbjct: 288 APMEVSNLKVTNDGSLTSLKVKWQRP-PGNVDS-YNITLSHKGTIK-----ESRVLAPWI 340
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW 300
+ FK LVPGR Y ++V VS E+S A RT P + + + SL V W
Sbjct: 341 TETHFKELVPGRLYQVTVSCVS-GELSAQKMAVGRTFPDKVANLEANNNG-RMRSLVVSW 398
Query: 301 EPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSE-GLEPGRTYQVLVKTVSG 359
PP G ++++Y++ + IT ++E TQ M + GL PGR Y+V V SG
Sbjct: 399 SPPAG--DWEQYRILLF--NDSVVLLNITVGKEE-TQYVMDDTGLVPGRQYEVEVIVESG 453
Score = 147 (56.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 64/242 (26%), Positives = 104/242 (42%)
Query: 83 TASITTPPDPPTNLSVNV-RSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
T + T P PP V+ ++ T+ W P SGK + ++ + L ++ +I G
Sbjct: 103 TVVLQTDPLPPARFGVSKEKTTSTSLHVWWTPSSGKVTSYE---VQLFDENNQKIQGVQI 159
Query: 142 NPPAG---YSLKDLTPGGSYQVQLFSVYDSKESVA-YTSRNFTTKPNTPGKFIVWFRNET 197
Y+ +LT G Y + + +V K S + YT N +T P+ P K I
Sbjct: 160 QESTSWNEYTFFNLTAGSKYNIAITAVSGGKRSFSVYT--NGSTVPS-PVKDIGISTKAN 216
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
+LL+ W S+ + Y++ + V+K AF GL PG YN++
Sbjct: 217 SLLISW--SHGSGNVERYRLMLMDKGILVHGGVVDKHA-----TSYAFHGLTPGYLYNLT 269
Query: 258 VQTVSEDEISTPTTAQYRTIPLRP--LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
V T + + RT P+ L T D S+TS L+V W+ P G D Y ++
Sbjct: 270 VMTEAAG-LQNYRWKLVRTAPMEVSNLKVTND-GSLTS--LKVKWQRPPG--NVDSYNIT 323
Query: 316 IN 317
++
Sbjct: 324 LS 325
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 57/214 (26%), Positives = 88/214 (41%)
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
YS L G Y V + +V S T + G + L V W +
Sbjct: 608 YSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSGRNDYLSVSWLLA 667
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
P + +Y+V++ L + K + +F L PGR Y +++ T S +
Sbjct: 668 -PGDV-DNYEVTLSHDGKVVQSLVIAKSVR-----ECSFSSLTPGRLYTVTITTRS-GKY 719
Query: 267 STPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST 326
+ +Q RT+P + + S S+ LRV W G +FD Y+V+I + +
Sbjct: 720 ENHSFSQERTVPDKVQGVSVSN-SARSDYLRVSWVHATG--DFDHYEVTIKNKNNFIQTK 776
Query: 327 PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
I KS +E C + L PGR Y V V T SG+
Sbjct: 777 SIPKSENE---CVFVQ-LVPGRLYSVTVTTKSGQ 806
Score = 131 (51.2 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 53/212 (25%), Positives = 86/212 (40%)
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207
S LTPG Y V + + E+ ++ S+ T G + L V W +
Sbjct: 698 SFSSLTPGRLYTVTITTRSGKYENHSF-SQERTVPDKVQGVSVSNSARSDYLRVSWV--H 754
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIS 267
+ HY+V+I + +++ + P + F LVPGR Y+++V T S +
Sbjct: 755 ATGDFDHYEVTIKNKNN-----FIQTKSIPKSENECVFVQLVPGRLYSVTVTTKS-GQYE 808
Query: 268 TPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP 327
RTIP T S + L V W G + D+Y++ + P
Sbjct: 809 ANEQGNGRTIPEPVKDLTLRNRS--TEDLHVTWSGANG--DVDQYEIQLLFN--DMKVFP 862
Query: 328 ITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ T+ + L PGR Y++LV T+SG
Sbjct: 863 PFHLVNTATEYRFTS-LTPGRQYKILVLTISG 893
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 69/302 (22%), Positives = 121/302 (40%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
+PG +Y+ + + + + + T P L V + + I W P++ ++
Sbjct: 439 VPGRQYEVEVIVESGNLKN--SERCQGRTVPLAVLQLRVKHANETSLSIMWQTPVA-EWE 495
Query: 120 GFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY-DSKESVAYTSRN 178
+ +ISL+++ I ++ DL PG Y + S+ D K S + R
Sbjct: 496 KY---IISLADRDLLLIHKSLSKDAKEFTFTDLVPGRKYMATVTSISGDLKNSSSVKGR- 551
Query: 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
T + ++L W + + Y+V + E+V+ ++ E
Sbjct: 552 -TVPAQVTDLHVANQGMTSSLFTNWTQAQGDVEF--YQVLL----IHENVV-IKNESISS 603
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
++ +F L G Y++ V TVS S + RT+P T + + ++ L V
Sbjct: 604 ETSRYSFHSLKSGSLYSVVVTTVSGGISSRQVVVEGRTVPSSVSGVTVNNSG-RNDYLSV 662
Query: 299 VWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
W G + D Y+V+++ S I KS E C S L PGR Y V + T S
Sbjct: 663 SWLLAPG--DVDNYEVTLSHDGKVVQSLVIAKSVRE---CSFSS-LTPGRLYTVTITTRS 716
Query: 359 GK 360
GK
Sbjct: 717 GK 718
Score = 40 (19.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 46 VSRDIKDNIEF-SEGLPGTKYDFYLYYTNSTVHDWLTWTAS 85
VS +K+ I +P D + NST H WTAS
Sbjct: 979 VSGSLKNQINVVGRTVPAAVTDLRIT-ENSTRHLSFRWTAS 1018
>MGI|MGI:101922 [details] [associations]
symbol:Tnc "tenascin C" species:10090 "Mus musculus"
[GO:0001968 "fibronectin binding" evidence=ISO] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005614 "interstitial matrix" evidence=IDA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0010628 "positive regulation of
gene expression" evidence=IDA] [GO:0014012 "peripheral nervous
system axon regeneration" evidence=IMP] [GO:0045545 "syndecan
binding" evidence=ISO] [GO:0060739 "mesenchymal-epithelial cell
signaling involved in prostate gland development" evidence=IMP]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 MGI:MGI:101922
INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0008284 GO:GO:0007528 SUPFAM:SSF49265
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0010628 eggNOG:NOG12793 GO:GO:0005604 GO:GO:0060740
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0014012 GO:GO:0005614
InterPro:IPR013111 Pfam:PF07974 Pfam:PF12661 GO:GO:0045545
HOVERGEN:HBG008949 OrthoDB:EOG4MSCX9 CTD:3371 KO:K06252 OMA:GQRSCPN
GO:GO:0060739 EMBL:D90343 EMBL:X56304 EMBL:AL732556 IPI:IPI00403938
IPI:IPI00420656 IPI:IPI00785310 IPI:IPI00785346 IPI:IPI00785360
PIR:JQ1322 RefSeq:NP_035737.2 UniGene:Mm.454219 UniGene:Mm.980
HSSP:P24821 ProteinModelPortal:Q80YX1 SMR:Q80YX1 STRING:Q80YX1
PhosphoSite:Q80YX1 PaxDb:Q80YX1 PRIDE:Q80YX1
Ensembl:ENSMUST00000030056 Ensembl:ENSMUST00000107372
Ensembl:ENSMUST00000107377 GeneID:21923 KEGG:mmu:21923
UCSC:uc008thg.2 GeneTree:ENSGT00690000102056 HOGENOM:HOG000234355
InParanoid:Q80YX1 NextBio:301496 Bgee:Q80YX1 CleanEx:MM_TNC
Genevestigator:Q80YX1 GermOnline:ENSMUSG00000028364 Uniprot:Q80YX1
Length = 2110
Score = 161 (61.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 75/306 (24%), Positives = 125/306 (40%)
Query: 59 GL-PGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG +Y+ L+ N+T L TT D P+++ V + TA I W P++
Sbjct: 772 GLAPGQEYEISLHIVKNNTRGPGLKKVT--TTRLDAPSHIEVKDVTDTTALITWFKPLA- 828
Query: 117 KYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSV-YDSKESVAY 174
+ +L + + R I T YS+ +L P Y+V L S D + A
Sbjct: 829 EIDSIELSY-GIKDVPGDRTTIDLTHEDNQ-YSIGNLRPDTEYEVSLISRRVDMASNPA- 885
Query: 175 TSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE 234
F T + P + + ++ + W+ + A I + Y++ P + ++
Sbjct: 886 -KETFITGLDAPRNLRRVSQTDNSITLEWR-NVKADIDS-YRIKYAPISGGDHA-EIDVP 941
Query: 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSN 294
+ GL PG Y I V V D+ S P T T P + T +
Sbjct: 942 KSQQATTKTTLTGLRPGTEYGIGVSAVKGDKESDPATINAATEIDAPKDLRVSET--TQD 999
Query: 295 SLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
SL W P ++FD+Y+ +N P S + +D + +++ LEPG+ Y VL+
Sbjct: 1000 SLTFFWTTP--LAKFDRYR--LNYSLPTGQSMEVQLPKDATSHV-LTD-LEPGQEYTVLL 1053
Query: 355 KTVSGK 360
G+
Sbjct: 1054 IAEKGR 1059
Score = 143 (55.4 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 72/345 (20%), Positives = 130/345 (37%)
Query: 20 NLSSDN----STYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNST 75
NL+ DN + Y + Y P H V D + + E PG +Y ++
Sbjct: 640 NLAWDNEMRVTEYLIMYTPTHADGLEMQFRVPGD-QTSTTIRELEPGVEYFIRVFAILEN 698
Query: 76 VHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR 135
+ +A + T P L + ++ W P + + +++ +++++
Sbjct: 699 KRS-IPVSARVATYLPAPEGLKFKSIKETSVEVEWDP-LDIAFETWEIIFRNMNKEDEGE 756
Query: 136 IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN 195
I P Y L PG Y++ L V ++ + TT+ + P V
Sbjct: 757 ITKSLRRPETSYRQTGLAPGQEYEISLHIVKNNTRGPGL-KKVTTTRLDAPSHIEVKDVT 815
Query: 196 ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
+TT L+ W P + ++S D P ++ E Q + L P Y
Sbjct: 816 DTTALITWFK--PLAEIDSIELSYGIKDVPGDRTTIDLTHEDN---QYSIGNLRPDTEYE 870
Query: 256 ISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
+S+ + D S P + T P + + S T NS+ + W K ++ D Y++
Sbjct: 871 VSLISRRVDMASNPAKETFITGLDAPRNLR--RVSQTDNSITLEWRNVK--ADIDSYRIK 926
Query: 316 INVRRPGA-SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
G + + KS+ T+ ++ GL PG Y + V V G
Sbjct: 927 YAPISGGDHAEIDVPKSQQATTKTTLT-GLRPGTEYGIGVSAVKG 970
Score = 123 (48.4 bits), Expect = 0.00077, P = 0.00077
Identities = 54/237 (22%), Positives = 93/237 (39%)
Query: 27 TYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVH-DWLTWTAS 85
++R+ Y+P G P T D + + + PG +Y + D ++ T
Sbjct: 1648 SFRITYVPMTGGAPSMVTVDGTDTETRLV--KLTPGVEYRVSVIAMKGFEESDPVSGT-- 1703
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
+ T D P+ L + + A W P I+ S VIS + + P +
Sbjct: 1704 LITALDGPSGLLIANITDSEALAMWQPAIATVDS----YVISYTGERVPEVTRTVSGNTV 1759
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
Y L DL P Y + +F+ ++S ++ FTT ++P +F T L+ W+P
Sbjct: 1760 EYELHDLEPATEYILSIFAEKGQQKSSTIATK-FTTDLDSPREFTATEVQSETALLTWRP 1818
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
P + T Y + + D + V G P + L P Y+ +Q +S
Sbjct: 1819 --PRASVTGYLLVYESVDGTVKEVIV---G--PDTTSYSLADLSPSTHYSARIQALS 1868
>UNIPROTKB|E1B7H2 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:DAAA02054431 IPI:IPI00706167 Ensembl:ENSBTAT00000025418
Uniprot:E1B7H2
Length = 2934
Score = 159 (61.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 86/343 (25%), Positives = 139/343 (40%)
Query: 20 NLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHD 78
NL + YRL++ G P + D+ + +GL PGT+Y LY T +
Sbjct: 437 NLVPEARGYRLEWRRESGLEVPQKVVLPSDVT-RYQL-DGLQPGTEYRLTLY-TLLEGRE 493
Query: 79 WLTWTASITTPPD----PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPP 134
T + T P+ P T L G+ ++ WSP + G + +++ V S
Sbjct: 494 VATPATVVPTGPELPVGPVTALQATELPGQRVRVSWSP-VPGA-TEYRITVRSAQGVERS 551
Query: 135 RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVA--YTSRNFTTKPNT-PGKFIV 191
++ ++ + L D+ G SY V++ + +E A T R P PG V
Sbjct: 552 LVLPGSQT---AFDLDDVRAGLSYTVRVSARVGGREGAASILTVRREPEPPLAIPG-LRV 607
Query: 192 WFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
+ T + V W P AS +++S + ES V P GL PG
Sbjct: 608 MASDATRVRVAWGPVPGAS---GFRISWRTDNGLESSQTV-----PSDSTATDIVGLRPG 659
Query: 252 RAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDK 311
+Y ++V + E P RT PL P+ + ++S+S+ + W G +
Sbjct: 660 TSYQVAVSALRGREEGPPAVIVARTDPLGPVRSVH-VTRVSSSSVTITWNRVPGATG--- 715
Query: 312 YQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
Y+VS R G + + E T ++ +GLEP Y V V
Sbjct: 716 YRVSWRSGR-GPEKSQLVSG--EATVAEL-DGLEPDTEYTVRV 754
>UNIPROTKB|Q9UQP3 [details] [associations]
symbol:TNN "Tenascin-N" species:9606 "Homo sapiens"
[GO:0005178 "integrin binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0016477 "cell migration"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016049 "cell growth" evidence=ISS] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060
INTERPRO:IPR002181 INTERPRO:IPR020837 GO:GO:0007165 GO:GO:0005615
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016477
GO:GO:0016049 SUPFAM:SSF49265 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186 GO:GO:0007160
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 EMBL:Z99297 KO:K06252
HOGENOM:HOG000234355 EMBL:Z99715 EMBL:BC136619 EMBL:AL049689
IPI:IPI00010814 RefSeq:NP_071376.1 UniGene:Hs.156369
ProteinModelPortal:Q9UQP3 SMR:Q9UQP3 STRING:Q9UQP3
PhosphoSite:Q9UQP3 DMDM:81175198 PaxDb:Q9UQP3 PeptideAtlas:Q9UQP3
PRIDE:Q9UQP3 Ensembl:ENST00000239462 GeneID:63923 KEGG:hsa:63923
UCSC:uc001gkl.1 CTD:63923 GeneCards:GC01P175036 H-InvDB:HIX0023596
HGNC:HGNC:22942 HPA:CAB010907 HPA:HPA026726 HPA:HPA026764
neXtProt:NX_Q9UQP3 PharmGKB:PA134973710 eggNOG:NOG279542
HOVERGEN:HBG106611 InParanoid:Q9UQP3 OMA:NTKAPTD OrthoDB:EOG49078D
ChiTaRS:TNN GenomeRNAi:63923 NextBio:65653 ArrayExpress:Q9UQP3
Bgee:Q9UQP3 CleanEx:HS_TNN Genevestigator:Q9UQP3
GermOnline:ENSG00000120332 Uniprot:Q9UQP3
Length = 1299
Score = 153 (58.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 77/330 (23%), Positives = 124/330 (37%)
Query: 19 ENLSSDNSTYRLDYIPAHGHPPPNTTYV-SRDIKDNIEFSEGL-PGTKYDFYLYYTNSTV 76
EN S++ Y+L Y P G T S D K + + GL PGT+Y + +
Sbjct: 372 ENPSTEVDYYKLRYGPMTGQEVAEVTVPKSSDPKSRYDIT-GLHPGTEYKITVVPMRGEL 430
Query: 77 HDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRI 136
+ + T D PTN+ + + TA + W P + + ++ S T
Sbjct: 431 -EGKPILLNGRTEIDSPTNVVTDRVTEDTATVSWDP-VQAVIDKYVVRYTSADGDTKEMA 488
Query: 137 IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNE 196
+ E+ L L PG +Y+V +++ ++ S N T+ ++P + E
Sbjct: 489 VHKDESSTV---LTGLKPGEAYKVYVWAERGNQGSKK-ADTNALTEIDSPANLVTDRVTE 544
Query: 197 TTLLVLWQPSYPASIYTHYKVSIDPPDAPES-VLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
T + W P A+I Y V D E+ + V KE + GL PG Y
Sbjct: 545 NTATISWDP-VQATI-DKYVVRYTSADDQETREVLVGKE-----QSSTVLTGLRPGVEYT 597
Query: 256 ISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
+ V D S T P + D+ +T N V W+P + + DKY V
Sbjct: 598 VHVWAQKGDRESKKADTNAPTDIDSPKNLVTDR--VTENMATVSWDPVQ--AAIDKYVVR 653
Query: 316 INVRRPGASSTPITKSRDEPTQCDMSEGLE 345
P+ K + + G+E
Sbjct: 654 YTSAGGETREVPVGKEQSSTVLTGLRPGME 683
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 65/289 (22%), Positives = 107/289 (37%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGK 117
GL PG Y Y++ T ++T D P NL + + TA I W P +
Sbjct: 500 GLKPGEAYKVYVWAERGNQGSKKADTNALTEI-DSPANLVTDRVTENTATISWDP-VQAT 557
Query: 118 YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSR 177
+ ++ S ++ ++ E + L L PG Y V +++ +ES
Sbjct: 558 IDKYVVRYTSADDQETREVLVGKEQ--SSTVLTGLRPGVEYTVHVWAQKGDRESKK-ADT 614
Query: 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
N T ++P + E V W P A+I Y V + V KE
Sbjct: 615 NAPTDIDSPKNLVTDRVTENMATVSWDP-VQAAI-DKYVVRYTSAGGETREVPVGKE--- 669
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLR 297
+ GL PG Y + V D+ S + +T P + D+ +T N
Sbjct: 670 --QSSTVLTGLRPGMEYMVHVWAQKGDQESKKADTKAQTDIDSPQNLVTDR--VTENMAT 725
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGAS-STPITKSRDEPTQCDMSEGLE 345
V W+P + + D+Y V + G + P+ K + + G+E
Sbjct: 726 VSWDPVR--ATIDRYVVRYTSAKDGETREVPVGKEQSSTVLTGLRPGVE 772
Score = 132 (51.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 49/177 (27%), Positives = 79/177 (44%)
Query: 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAA 244
TP + E +LLV W+PS S HY +S P S ++ P
Sbjct: 264 TPQGLQLLKNTEDSLLVSWEPS---SQVDHYLLSYYPLGKELSGKQIQV---PKEQHSYE 317
Query: 245 FKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPK 304
GL+PG Y ++++ V ++E+S+ T L L + T NSL V WE P
Sbjct: 318 ILGLLPGTKYIVTLRNV-KNEVSSSPQHLLATTDLAVLGTAW-VTDETENSLDVEWENPS 375
Query: 305 GFSEFDKYQVSIN-VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+E D Y++ + + + KS D ++ D++ GL PG Y++ V + G+
Sbjct: 376 --TEVDYYKLRYGPMTGQEVAEVTVPKSSDPKSRYDIT-GLHPGTEYKITVVPMRGE 429
Score = 129 (50.5 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 62/265 (23%), Positives = 107/265 (40%)
Query: 93 PTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDL 152
P L + + + + W P S + + L L ++ + I + + Y + L
Sbjct: 265 PQGLQLLKNTEDSLLVSWEP--SSQVDHYLLSYYPLGKELSGKQIQVPKEQHS-YEILGL 321
Query: 153 TPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET--TLLVLWQPSYPAS 210
PG Y V L +V K V+ + ++ + W +ET +L V W+ P++
Sbjct: 322 LPGTKYIVTLRNV---KNEVSSSPQHLLATTDLAVLGTAWVTDETENSLDVEWEN--PST 376
Query: 211 IYTHYKVSIDPPDAPE-SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTP 269
+YK+ P E + + V K +P ++ GL PG Y I+V + + P
Sbjct: 377 EVDYYKLRYGPMTGQEVAEVTVPKSSDPK--SRYDITGLHPGTEYKITVVPMRGELEGKP 434
Query: 270 TTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT 329
RT P + D+ +T ++ V W+P + DKY V +
Sbjct: 435 ILLNGRTEIDSPTNVVTDR--VTEDTATVSWDPVQAV--IDKYVVRYTSADGDTKEMAVH 490
Query: 330 KSRDEPTQCDMSEGLEPGRTYQVLV 354
K DE + + GL+PG Y+V V
Sbjct: 491 K--DESST--VLTGLKPGEAYKVYV 511
Score = 123 (48.4 bits), Expect = 0.00045, P = 0.00045
Identities = 72/339 (21%), Positives = 120/339 (35%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLT 81
SS Y L Y P V ++ + + E LPGTKY L + V
Sbjct: 285 SSQVDHYLLSYYPLGKELSGKQIQVPKE-QHSYEILGLLPGTKYIVTLRNVKNEVSSSPQ 343
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRI-IGFT 140
+ TT V + + + W P S + +KL+ ++ + + + +
Sbjct: 344 HLLA-TTDLAVLGTAWVTDETENSLDVEWENP-STEVDYYKLRYGPMTGQEVAEVTVPKS 401
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
+P + Y + L PG Y++ + + E N T+ ++P + E T
Sbjct: 402 SDPKSRYDITGLHPGTEYKITVVPMRGELEGKPILL-NGRTEIDSPTNVVTDRVTEDTAT 460
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
V W P ++ Y V D + V K+ + GL PG AY + V
Sbjct: 461 VSWDPVQ--AVIDKYVVRYTSADGDTKEMAVHKD-----ESSTVLTGLKPGEAYKVYVWA 513
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
++ S T P + D+ +T N+ + W+P + + DKY V
Sbjct: 514 ERGNQGSKKADTNALTEIDSPANLVTDR--VTENTATISWDPVQ--ATIDKYVVRYTSAD 569
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ + T + GL PG Y V V G
Sbjct: 570 DQETREVLVGKEQSST---VLTGLRPGVEYTVHVWAQKG 605
Score = 122 (48.0 bits), Expect = 0.00058, P = 0.00058
Identities = 77/355 (21%), Positives = 131/355 (36%)
Query: 12 NLVI-KIPENLSS---DNSTYRLD-YIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKY 65
NLV ++ EN+++ D +D Y+ + T V + + GL PG +Y
Sbjct: 625 NLVTDRVTENMATVSWDPVQAAIDKYVVRYTSAGGETREVPVGKEQSSTVLTGLRPGMEY 684
Query: 66 DFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKV 125
+++ T + T D P NL + + A + W P + + ++
Sbjct: 685 MVHVWAQKGDQESKKADTKA-QTDIDSPQNLVTDRVTENMATVSWDP-VRATIDRYVVRY 742
Query: 126 ISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPN 184
S + + +G ++ L L PG Y V +++ ++ES ++ T +
Sbjct: 743 TSAKDGETREVPVGKEQSSTV---LTGLRPGVEYTVHVWAQKGAQESKKADTKA-QTDID 798
Query: 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAA 244
+P + + E T V W P A+I Y V + + V KE +
Sbjct: 799 SPQNLVTDWVTENTATVSWDP-VQATI-DRYVVHYTSANGETREVPVGKE-----QSSTV 851
Query: 245 FKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPK 304
GL PG Y + V ++ S + +T P + D +T N V W+P +
Sbjct: 852 LTGLRPGMEYTVHVWAQKGNQESKKADTKAQTEIDGPKNLVTDW--VTENMATVSWDPVQ 909
Query: 305 GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ DKY V P+ K + GL PG Y V V G
Sbjct: 910 --ATIDKYMVRYTSADGETREVPVGKEHSST----VLTGLRPGMEYMVHVWAQKG 958
>UNIPROTKB|F1S285 [details] [associations]
symbol:COL14A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0005615 "extracellular space" evidence=IEA] InterPro:IPR002035
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391
GO:GO:0031012 InterPro:IPR001791 SMART:SM00210
GeneTree:ENSGT00700000104243 OMA:VYNVAEF EMBL:CU463819
EMBL:CU302271 EMBL:CU571040 Ensembl:ENSSSCT00000006580
Uniprot:F1S285
Length = 1790
Score = 154 (59.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 64/277 (23%), Positives = 108/277 (38%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
AS PPT L + + ++ + W+ GK +++ P ++ +
Sbjct: 341 ASALAAIGPPTELLTSEVTARSFMVNWTHA-PGKVEKYRVVYYPTRGGKPEEVV--VDGS 397
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+ LK+L YQ+ +F++Y S T ++ E +L W
Sbjct: 398 ISSTVLKNLMSLTEYQIAVFAIYAHTASEGLRGTETTLALPIASDLELYDVTENSLRARW 457
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKE---GEPPGPAQAAFKGLVPGRAYNISVQT 260
P AS Y + P E + EKE GE + +GL+P Y ++V
Sbjct: 458 NPVAGAS---GYLILYAP--LTEGLAGDEKEMKIGETHTDIE--LRGLLPNTEYTVTVYA 510
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
+ +E S P T Q T+PL P +++ SNS R+ W+P Y++ N
Sbjct: 511 MFGEEASDPVTGQETTLPLSPPR-NLRISNVGSNSARLAWDPTS--RRISGYRIVYN--- 564
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
A T I + +P +GL P Y V + ++
Sbjct: 565 -NADGTEINEVEVDPITTFPLKGLTPITEYTVAIFSI 600
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 74/272 (27%), Positives = 119/272 (43%)
Query: 53 NIEFSEGLPGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWS 111
+IE LP T+Y +Y D +T + T P PP NL ++ +A++ W
Sbjct: 492 DIELRGLLPNTEYTVTVYAMFGEEASDPVTGQET-TLPLSPPRNLRISNVGSNSARLAWD 550
Query: 112 PPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES 171
P S + SG+++ V + ++ T I +P + LK LTP Y V +FS+YD +S
Sbjct: 551 PT-SRRISGYRI-VYNNADGT--EINEVEVDPITTFPLKGLTPITEYTVAIFSIYDEGQS 606
Query: 172 VAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLY 230
T F+T+ +++ T + V W P A H K+ P ++
Sbjct: 607 EPLTGI-FSTEEVPAQQYLEIDEVMTDSFRVTWHP-LSADEGQH-KLMWIPVYGGKTQEV 663
Query: 231 VEKEGEPPGPAQAAFKGLVPGRAYNISVQTV----SEDEISTP---TTAQYRT------I 277
V KE + +GL PG Y +S+ V SE E+ T T + T +
Sbjct: 664 VLKEDQD----SYVIEGLEPGTEYEVSLLAVLDDGSESEVVTAVGTTLDSFWTEPATTVL 719
Query: 278 PLRPLSFTYDKASI--------TSNSLRVVWE 301
P RP++ + + I T++SLRV W+
Sbjct: 720 PTRPVTSVF-RTGIRNLVVDDETTSSLRVKWD 750
Score = 131 (51.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 74/337 (21%), Positives = 138/337 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY--YTNSTVHDWLTWTAS 85
YR+ Y P G P V I + + T+Y ++ Y + T + L T +
Sbjct: 377 YRVVYYPTRGGKPEEVV-VDGSISSTV-LKNLMSLTEYQIAVFAIYAH-TASEGLRGTET 433
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE----KTPPRIIGFTE 141
P ++L + + + + W+P ++G SG+ + L+E IG T
Sbjct: 434 TLALPIA-SDLELYDVTENSLRARWNP-VAGA-SGYLILYAPLTEGLAGDEKEMKIGETH 490
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI-VWFRNETTLL 200
L+ L P Y V +++++ + S T + TT P +P + + + +
Sbjct: 491 TD---IELRGLLPNTEYTVTVYAMFGEEASDPVTGQE-TTLPLSPPRNLRISNVGSNSAR 546
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ W P+ + + Y++ + D E + VE + P KGL P Y +++ +
Sbjct: 547 LAWDPT--SRRISGYRIVYNNADGTE-INEVEVDPITTFP----LKGLTPITEYTVAIFS 599
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
+ ++ S P T + T + P + + ++S RV W P E + I V
Sbjct: 600 IYDEGQSEPLTGIFSTEEV-PAQQYLEIDEVMTDSFRVTWHPLSA-DEGQHKLMWIPVY- 656
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
G + + D+ + + EGLEPG Y+V + V
Sbjct: 657 -GGKTQEVVLKEDQDSY--VIEGLEPGTEYEVSLLAV 690
>ZFIN|ZDB-GENE-101108-3 [details] [associations]
symbol:ptprb "protein tyrosine phosphatase, receptor
type, b" species:7955 "Danio rerio" [GO:0016311 "dephosphorylation"
evidence=IEA] [GO:0016791 "phosphatase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0004725
"protein tyrosine phosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 ZFIN:ZDB-GENE-101108-3 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00700000104166 EMBL:CABZ01062511 EMBL:CABZ01062512
EMBL:CABZ01062513 EMBL:CABZ01062514 EMBL:CABZ01062515
EMBL:CABZ01062516 EMBL:CABZ01062517 EMBL:CABZ01062518
EMBL:CABZ01062519 EMBL:CABZ01062520 IPI:IPI00995756
Ensembl:ENSDART00000127299 Uniprot:E7F3F9
Length = 1892
Score = 154 (59.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 64/212 (30%), Positives = 94/212 (44%)
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYP 208
++ L PG Y + + S D K+ + + T+P+ V + +L V WQP
Sbjct: 80 IESLDPGTWYHLDVISTLDEKQQ-SQRAVTLQTRPSAVENLQV-SGDANSLDVSWQPG-K 136
Query: 209 ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT-VSEDEIS 267
++ V ID +S KGL+ GR YNI+V T V E + S
Sbjct: 137 GKTERYWIVLIDS-SGRDSAW---NSTVASTATSYTMKGLISGRLYNITVVTEVGELQNS 192
Query: 268 TPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP 327
T AQ T P +S + + NS+RV+W+ G + D Y VS+ PG++S
Sbjct: 193 ASTQAQ--TAPAS-VSKLRTENNGDRNSIRVLWDKASG--DVDSYLVSLTT--PGSNSIE 245
Query: 328 ITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
D+ T + E L PG+ YQV V T SG
Sbjct: 246 KVLPPDD-TYV-VFENLSPGKGYQVSVSTRSG 275
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 91/359 (25%), Positives = 151/359 (42%)
Query: 8 VHGA-NLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYD 66
+H A + +K+ N +S + Y + I H + ++R D FS+ +PG Y
Sbjct: 655 IHSARDDFLKLYWNHASGDYDYYVVTIE-HNGTRLQSQKLNRTQSD-CAFSDLVPGRLY- 711
Query: 67 FYLYYTNSTVHDWLT--WTA-SI--TTPPDPPTNLSVNVRSGKTAQIFW-SPPISGKYSG 120
N TV W ++A SI T P NLS+ R G ++ W S P G
Sbjct: 712 ------NLTVSTWSGQHYSAVSIYGRTFPGAVGNLSLTERGGTFLRVSWTSAP--GDVDH 763
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
++L+++ ++ + + + + LTPG Y++ L S + A T
Sbjct: 764 YELQIL-FNDTQVSAAVNLS-SAIGEHLFSALTPGRLYKIVL-STHSGSYQRAEILEGRT 820
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
+ + +L V W S + Y VS+ E+ L + P
Sbjct: 821 VPSQVQSVHLSAGTADGSLRVSWS-SADGDL-DFYSVSL----FQETHLQ-DSRRVPKHI 873
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW 300
QA F L+PG+ Y+++VQ+VS + + TT RT P D ++++SL V W
Sbjct: 874 TQAEFYNLIPGQLYSVTVQSVSGSQTNNSTTTG-RTEPSTVTGLRADN-ELSTHSLLVSW 931
Query: 301 EPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
P G D Y++ + G ++ S ++ + E L PGR YQ V+T+SG
Sbjct: 932 NPAVGVH--DGYRLWL--LDDGGTNIH-NASVPAASRHHLFENLTPGRRYQAHVRTLSG 985
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/123 (36%), Positives = 65/123 (52%)
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLR 297
P Q F LV GR Y +VQT SED +S TTA RT+P P S + S + S+
Sbjct: 1132 PEVTQVVFHSLVAGRLYLATVQTWSED-LSNSTTAVGRTVPAAPSSVS---VSCSGGSVD 1187
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ W P +++ ++V+ + + I+ R PTQ + EGL PGR Y + ++TV
Sbjct: 1188 MKWHVPDT-GDYEDFEVTWFPQ----DTLYISHLR--PTQ-RILEGLHPGRLYNISLRTV 1239
Query: 358 SGK 360
SGK
Sbjct: 1240 SGK 1242
Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 67/302 (22%), Positives = 122/302 (40%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASIT--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKY 118
PGT Y + ST+ + ++T T P NL V+ + + W P GK
Sbjct: 85 PGTWYHLDVI---STLDEKQQSQRAVTLQTRPSAVENLQVS-GDANSLDVSWQPG-KGKT 139
Query: 119 SGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN 178
+ + +I S + + Y++K L G Y + + + ++ A T
Sbjct: 140 ERYWIVLIDSSGRDSAWN-STVASTATSYTMKGLISGRLYNITVVTEVGELQNSASTQAQ 198
Query: 179 FTTKPNTPGKFIVWFRNE-TTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
T P + K + ++ VLW + + Y VS+ P + +EK P
Sbjct: 199 --TAPASVSKLRTENNGDRNSIRVLWDKA--SGDVDSYLVSLTTPGSNS----IEKV-LP 249
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLR 297
P F+ L PG+ Y +SV T S +S T + P + + S+ +L+
Sbjct: 250 PDDTYVVFENLSPGKGYQVSVSTRS-GALSNKTWITGKADPGKVSDLVIENLSVRG-ALK 307
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ W PP G E++ +V+++ + + ++ E ++ L PGR Y++ V
Sbjct: 308 ISWTPPSG--EWEHIRVALSNGSEVLRNQTVGRTAKEILLSGLN--LLPGRVYRMAVSVE 363
Query: 358 SG 359
+G
Sbjct: 364 NG 365
Score = 137 (53.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/138 (31%), Positives = 64/138 (46%)
Query: 225 PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQ--YRTIPLRPL 282
P+ LY+ P Q +GL PGR YNIS++TVS S T ++ Y TI PL
Sbjct: 1207 PQDTLYISHLR----PTQRILEGLHPGRLYNISLRTVSGKRHSPVTYSRPVYHTIRTPPL 1262
Query: 283 SF-TYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS 341
+ ++S S+ W PP S++D + V + R G+ T + T
Sbjct: 1263 PAPSIHCFPLSSTSVSCSWTPPH--SDYDGFVVQCH--RQGSGKAVYTHTLGNHTLSQQF 1318
Query: 342 EGLEPGRTYQVLVKTVSG 359
+ LEP + Y + V +SG
Sbjct: 1319 DRLEPFKNYTIYVAVMSG 1336
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 77/340 (22%), Positives = 130/340 (38%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLT 81
SS Y + ++ T +SRD+++ F+ PG YD + T + T
Sbjct: 405 SSSRDGYIIQLFQSNTSTVIQTRNLSRDMRE-CTFNVLTPGRLYDITVTTTAKIIRSSAT 463
Query: 82 WTASITTPPDPPTNLSV-NVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFT 140
T P +L + N S + W P+ G + + ++ ++T I +
Sbjct: 464 LQGR--TQPLKVNHLKLSNKGSTDSLNASWEKPL-GDLDFYHMLLLR-DQQTVHNITA-S 518
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
N + L L PG +++ + ++ S+ S T P V L
Sbjct: 519 ANTTSRL-LPFLRPGALHKILVTTISGSQTS-KLAEAECRTVPAAVSDITVTNSGPDFLN 576
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
V W+ + +Y V + + L K + F+ LV GR Y+IS+ T
Sbjct: 577 VSWKAA--EGDVDNYVVMLKDQEKIVHTLATSK-----ATTECVFRSLVSGRLYSISIAT 629
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
S T Q RT P + T S + L++ W G ++D Y V+I
Sbjct: 630 HS-GSYRNQTLLQERTKPSTVQNPTAIH-SARDDFLKLYWNHASG--DYDYYVVTIEHNG 685
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
S + +++ + C S+ L PGR Y + V T SG+
Sbjct: 686 TRLQSQKLNRTQSD---CAFSD-LVPGRLYNLTVSTWSGQ 721
>UNIPROTKB|Q28275 [details] [associations]
symbol:FN1 "Fibronectin" species:9615 "Canis lupus
familiaris" [GO:0005515 "protein binding" evidence=IPI] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0008360
"regulation of cell shape" evidence=IEA] [GO:0008201 "heparin
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0006953 "acute-phase response" evidence=IEA] InterPro:IPR000083
InterPro:IPR003961 Pfam:PF00039 Pfam:PF00041 PROSITE:PS01253
PROSITE:PS50853 PROSITE:PS51091 SMART:SM00058 SMART:SM00060
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0008360 SUPFAM:SSF49265
GO:GO:0006953 GO:GO:0005578 GO:GO:0008201 GO:GO:0007155
eggNOG:NOG12793 HOGENOM:HOG000234344 EMBL:U52106 EMBL:U52105
UniGene:Cfa.3707 ProteinModelPortal:Q28275 SMR:Q28275 STRING:Q28275
PRIDE:Q28275 HOVERGEN:HBG103380 InParanoid:Q28275 OrthoDB:EOG4W3SM1
Uniprot:Q28275
Length = 522
Score = 144 (55.7 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 49/192 (25%), Positives = 78/192 (40%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA-GYSLK 150
PP V + T I W +GF++ I + + P I T P Y++
Sbjct: 29 PPRRARVTDATETTITISWRTKTE-TITGFQVDAIPANGQNP---IQRTIRPDVRSYTIT 84
Query: 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPAS 210
L PG Y++ L+++ D+ S + +T + P +LLV WQP P +
Sbjct: 85 GLQPGTDYKIYLYTLNDNARSSPVVI-DASTAIDAPSNLRFLATTPNSLLVSWQP--PRA 141
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
T Y + + P +P + PG +A GL PG Y I V + ++ S P
Sbjct: 142 RITGYIIKYEKPGSPPREVVPRPR---PGVTEATITGLEPGTEYTIQVIALKNNQKSEPL 198
Query: 271 TAQYRTIPLRPL 282
+ +T L L
Sbjct: 199 IGRKKTDELPQL 210
Score = 125 (49.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 49/200 (24%), Positives = 84/200 (42%)
Query: 158 YQVQLFSVYDSKESVAYTSRNFTTKPNT--PGKFIVWFRNETTLLVLWQPSYPASIYTHY 215
Y+V ++++ D+ S TT N P + V ETT+ + W+ T +
Sbjct: 1 YEVSVYALKDTLTSRP-AQGVVTTLENVSPPRRARVTDATETTITISWRTK--TETITGF 57
Query: 216 KVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYR 275
+V P + + + P GL PG Y I + T++++ S+P
Sbjct: 58 QVDAIPANGQNPIQRTIR----PDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDAS 113
Query: 276 TIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT-KSRDE 334
T P + + + T NSL V W+PP+ + Y I +PG+ + + R
Sbjct: 114 TAIDAPSNLRF--LATTPNSLLVSWQPPR--ARITGY--IIKYEKPGSPPREVVPRPRPG 167
Query: 335 PTQCDMSEGLEPGRTYQVLV 354
T+ ++ GLEPG Y + V
Sbjct: 168 VTEATIT-GLEPGTEYTIQV 186
Score = 124 (48.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHDWLTWTASI 86
+++D IPA+G P T + D++ GL PGT Y YLY N
Sbjct: 57 FQVDAIPANGQNPIQRT-IRPDVRSYT--ITGLQPGTDYKIYLYTLNDNARSSPV-VIDA 112
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK--TPPRIIGFTENPP 144
+T D P+NL + + + W PP + +G+ +K EK +PPR + P
Sbjct: 113 STAIDAPSNLRFLATTPNSLLVSWQPP-RARITGYIIKY----EKPGSPPREV--VPRPR 165
Query: 145 AGYS---LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
G + + L PG Y +Q+ ++ ++++S R T
Sbjct: 166 PGVTEATITGLEPGTEYTIQVIALKNNQKSEPLIGRKKT 204
Score = 57 (25.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 195 NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254
++TT + W P +S Y +S P E L G A A GL G Y
Sbjct: 330 SQTT--ISWTPFQESS---EYIISCHPVGIDEEPLQFRVPGTS---ASATLTGLTRGATY 381
Query: 255 NISVQTVSEDE 265
NI V+ + + +
Sbjct: 382 NIIVEALKDQK 392
Score = 43 (20.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKT 356
+ W P F E +Y +S + G P+ + R T + GL G TY ++V+
Sbjct: 334 ISWTP---FQESSEYIISCHP--VGIDEEPL-QFRVPGTSASATLTGLTRGATYNIIVEA 387
Query: 357 V 357
+
Sbjct: 388 L 388
>UNIPROTKB|Q05707 [details] [associations]
symbol:COL14A1 "Collagen alpha-1(XIV) chain" species:9606
"Homo sapiens" [GO:0030198 "extracellular matrix organization"
evidence=NAS;TAS] [GO:0030674 "protein binding, bridging"
evidence=NAS] [GO:0016337 "cell-cell adhesion" evidence=NAS]
[GO:0005596 "collagen type XIV" evidence=NAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0005518 "collagen binding" evidence=NAS] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0030199
"collagen fibril organization" evidence=NAS] [GO:0005581 "collagen"
evidence=NAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0005615 "extracellular
space" evidence=IDA] InterPro:IPR002035 InterPro:IPR003961
Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Reactome:REACT_118779 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0030199
GO:GO:0030674 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005788
GO:GO:0005518 GO:GO:0016337 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 PROSITE:PS50025 GO:GO:0005201 SMART:SM00210
HOVERGEN:HBG051060 CTD:7373 eggNOG:NOG307460 KO:K08133
EMBL:AC020603 EMBL:AC090735 EMBL:AC107877 EMBL:BC014640
EMBL:BC083495 EMBL:BC140893 EMBL:Y11709 EMBL:Y11710 EMBL:Y11711
EMBL:M64108 EMBL:M64109 IPI:IPI00176193 IPI:IPI00402215
IPI:IPI00550918 PIR:A40970 PIR:B40970 PIR:S37749 PIR:S46657
RefSeq:NP_066933.1 UniGene:Hs.409662 ProteinModelPortal:Q05707
SMR:Q05707 IntAct:Q05707 STRING:Q05707 PhosphoSite:Q05707
DMDM:125987815 PaxDb:Q05707 PRIDE:Q05707 Ensembl:ENST00000247781
Ensembl:ENST00000297848 Ensembl:ENST00000309791 GeneID:7373
KEGG:hsa:7373 UCSC:uc003yox.3 GeneCards:GC08P121093
H-InvDB:HIX0007753 HGNC:HGNC:2191 HPA:HPA023781 MIM:120324
neXtProt:NX_Q05707 PharmGKB:PA26707 InParanoid:Q05707 OMA:VYNVAEF
OrthoDB:EOG4PC9R7 ChiTaRS:COL14A1 GenomeRNAi:7373 NextBio:28870
ArrayExpress:Q05707 Bgee:Q05707 CleanEx:HS_COL14A1
Genevestigator:Q05707 GermOnline:ENSG00000187955 GO:GO:0005596
Uniprot:Q05707
Length = 1796
Score = 151 (58.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 65/249 (26%), Positives = 105/249 (42%)
Query: 53 NIEFSEGLPGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWS 111
+IE S LP T+Y +Y D +T + T PP NL ++ +A++ W
Sbjct: 498 DIELSGLLPNTEYTVTVYAMFGEEASDPVTGQET-TLALSPPRNLRISNVGSNSARLTWD 556
Query: 112 PPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES 171
P S + +G+++ V + ++ T I +P + LK LTP Y + +FS+YD +S
Sbjct: 557 PT-SRQINGYRI-VYNNADGT--EINEVEVDPITTFPLKGLTPLTEYTIAIFSIYDEGQS 612
Query: 172 VAYTSRNFTTKPNTPGKFIVWFRNETT--LLVLWQP-SYPASIYTHYKVSIDPPDAPESV 228
T FTT+ P + + TT V W P S ++ + + E V
Sbjct: 613 EPLTGV-FTTE-EVPAQQYLEIDEVTTDSFRVTWHPLSADEGLHKLMWIPVYGGKTEEVV 670
Query: 229 LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV----SEDEISTPTTAQYRTIPLRPLSF 284
L E++ +GL PG Y +S+ V SE E+ T + P +
Sbjct: 671 LKEEQDSH-------VIEGLEPGTEYEVSLLAVLDDGSESEVVTAVGTTLDSFWTEPATT 723
Query: 285 TYDKASITS 293
S+TS
Sbjct: 724 IVPTTSVTS 732
Score = 141 (54.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 57/269 (21%), Positives = 109/269 (40%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PPT L + + ++ + W+ G +++ P ++ + + LK+
Sbjct: 355 PPTELITSEVTARSFMVNWTHA-PGNVEKYRVVYYPTRGGKPDEVV--VDGTVSSTVLKN 411
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASI 211
L YQ+ +F++Y S T +++ E ++ V W + P +
Sbjct: 412 LMSLTEYQIAVFAIYAHTASEGLRGTETTLALPMASDLLLYDVTENSMRVKWD-AVPGA- 469
Query: 212 YTHYKVSIDPPDAPESVLYVEKE---GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIST 268
+ Y + P E + EKE GE + + GL+P Y ++V + +E S
Sbjct: 470 -SGYLILYAP--LTEGLAGDEKEMKIGETHTDIELS--GLLPNTEYTVTVYAMFGEEASD 524
Query: 269 PTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPI 328
P T Q T+ L P +++ SNS R+ W+P + + Y++ N A T I
Sbjct: 525 PVTGQETTLALSPPR-NLRISNVGSNSARLTWDPTS--RQINGYRIVYN----NADGTEI 577
Query: 329 TKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
+ +P +GL P Y + + ++
Sbjct: 578 NEVEVDPITTFPLKGLTPLTEYTIAIFSI 606
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 73/284 (25%), Positives = 119/284 (41%)
Query: 15 IKIPENLS-SDNSTYRLDYIPAHGHPPPNT--TYVSRDIKDNIEFSEGLPGTKYDFYL-- 69
+++ ++S SD +R+ Y+ A G P T + ++N+ LP T+Y +
Sbjct: 751 LRVKWDISDSDVQQFRVTYMTAQGDPEEEVIGTVMVPGSQNNLLLKPLLPDTEYKVTVTP 810
Query: 70 YYTNSTVHDWLTWTA-SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKL--KVI 126
YT+ + ++ +A T P P NL V+ +I W PP S G+++ K +
Sbjct: 811 IYTDG---EGVSVSAPGKTLPSSGPQNLRVSEEWYNRLRITWDPP-SSPVKGYRIVYKPV 866
Query: 127 SLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN---FTTKP 183
S+ T +G N + +L G Y V++F+ S S A T F
Sbjct: 867 SVPGPTLETFVGADINT---ILITNLLSGMDYNVKIFASQASGFSDALTGMVKTLFLGVT 923
Query: 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA 243
N K + T+L WQ A+ Y S+ ES + G G +
Sbjct: 924 NLQAKHV----EMTSLCAHWQVHRHATAYRVVIESLQDRQKQESTV-----GG--GTTRH 972
Query: 244 AFKGLVPGRAYNISVQTVSEDEISTPTTA---QYRTIPLRPLSF 284
F GL P Y ISV T + EI P+ + + +++P RP +F
Sbjct: 973 CFYGLQPDSEYKISVYTKLQ-EIEGPSVSIMEKTQSLPTRPPTF 1015
Score = 126 (49.4 bits), Expect = 0.00030, P = 0.00030
Identities = 72/336 (21%), Positives = 129/336 (38%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY--YTNSTVHDWLTWTAS 85
YR+ Y P G P V + + + T+Y ++ Y + T + L T +
Sbjct: 383 YRVVYYPTRGGKPDEVV-VDGTVSSTV-LKNLMSLTEYQIAVFAIYAH-TASEGLRGTET 439
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE----KTPPRIIGFTE 141
P L +V + ++ W + G SG+ + L+E IG T
Sbjct: 440 TLALPMASDLLLYDVTEN-SMRVKWDA-VPGA-SGYLILYAPLTEGLAGDEKEMKIGETH 496
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
L L P Y V +++++ + S T + T + P + + +
Sbjct: 497 TD---IELSGLLPNTEYTVTVYAMFGEEASDPVTGQETTLALSPPRNLRISNVGSNSARL 553
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
W P+ + Y++ + D E + VE + P KGL P Y I++ ++
Sbjct: 554 TWDPT--SRQINGYRIVYNNADGTE-INEVEVDPITTFP----LKGLTPLTEYTIAIFSI 606
Query: 262 SEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRP 321
++ S P T + T + P + +T++S RV W P K + I V
Sbjct: 607 YDEGQSEPLTGVFTTEEV-PAQQYLEIDEVTTDSFRVTWHPLSADEGLHKL-MWIPVY-- 662
Query: 322 GASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
G + + ++ + + EGLEPG Y+V + V
Sbjct: 663 GGKTEEVVLKEEQDSH--VIEGLEPGTEYEVSLLAV 696
>UNIPROTKB|E1BA17 [details] [associations]
symbol:LOC781493 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] InterPro:IPR002035
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391
GO:GO:0031012 InterPro:IPR001791 SMART:SM00210
GeneTree:ENSGT00700000104243 OMA:VYNVAEF EMBL:DAAA02039701
IPI:IPI00717116 Ensembl:ENSBTAT00000017783 ArrayExpress:E1BA17
Uniprot:E1BA17
Length = 1800
Score = 151 (58.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 63/277 (22%), Positives = 110/277 (39%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
AS PPT L + + ++ + W+ GK +++ P ++ +
Sbjct: 348 ASALATVGPPTELMTSEVTARSFMVNWTHA-PGKVEKYRIVYYPTRGGKPEEVV--VDGR 404
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+ L++L YQ+ +F++Y S T ++ E +L W
Sbjct: 405 VSSTVLRNLMSLTEYQIAVFAIYAHTASEGLRGTETTLSLPIASDLELYDVTENSLRARW 464
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKE---GEPPGPAQAAFKGLVPGRAYNISVQT 260
P AS Y + P E + EKE GE + + GL+P Y ++V
Sbjct: 465 NPVPGAS---GYLILYAP--LTEGLAGDEKEVKIGETHTDIELS--GLLPNTEYTVTVYA 517
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
+ +E S P T Q T+PL P ++I SNS R+ W+ ++ + Y++ N
Sbjct: 518 MFGEEASDPVTGQESTLPLSPPR-NLRISNIGSNSARLAWDATS--TKINGYRIIYN--- 571
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
A T I + +P +GL P Y V + ++
Sbjct: 572 -NADGTEINEVEVDPVTTFPLKGLTPLTEYTVTILSI 607
Score = 141 (54.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 74/273 (27%), Positives = 116/273 (42%)
Query: 53 NIEFSEGLPGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWS 111
+IE S LP T+Y +Y D +T S T P PP NL ++ +A++ W
Sbjct: 499 DIELSGLLPNTEYTVTVYAMFGEEASDPVTGQES-TLPLSPPRNLRISNIGSNSARLAWD 557
Query: 112 PPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES 171
S K +G+++ + + ++ T I +P + LK LTP Y V + S+YD +S
Sbjct: 558 AT-STKINGYRI-IYNNADGT--EINEVEVDPVTTFPLKGLTPLTEYTVTILSIYDEGQS 613
Query: 172 VAYTSRNFTTKPNTPGKFIVWFRNET--TLLVLWQPSYPASIYTHYKVSIDPPDAPESVL 229
T FTT+ P + + T + V W P A H K+ P +
Sbjct: 614 EPLTGV-FTTE-EVPAQQYLEIDEVTPDSFRVSWHP-LSADEGQH-KLMWIPVYGGSTEE 669
Query: 230 YVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV----SEDEIST-------------PTTA 272
V +E + +GL PG Y +S+ V SE E+ T PTT
Sbjct: 670 VVLQEDQD----SYVIEGLEPGTEYEVSLLAVLDDGSESEVVTAVGTTLDSFWTEPPTTE 725
Query: 273 QYRTIPLRPLSFTYDKASI----TSNSLRVVWE 301
+ T P+ + T + + T++SLRV W+
Sbjct: 726 EAPTRPVTSVFRTGIRNLVVDAETTSSLRVAWD 758
Score = 127 (49.8 bits), Expect = 0.00024, P = 0.00024
Identities = 70/334 (20%), Positives = 133/334 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY--YTNSTVHDWLTWTAS 85
YR+ Y P G P R + + + T+Y ++ Y + T + L T +
Sbjct: 384 YRIVYYPTRGGKPEEVVVDGR-VSSTV-LRNLMSLTEYQIAVFAIYAH-TASEGLRGTET 440
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTP--PRIIGFTENP 143
+ P ++L + + + + W+P + G SG+ + L+E + + E
Sbjct: 441 TLSLPIA-SDLELYDVTENSLRARWNP-VPGA-SGYLILYAPLTEGLAGDEKEVKIGETH 497
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
L L P Y V +++++ + S T + T + P + + + W
Sbjct: 498 -TDIELSGLLPNTEYTVTVYAMFGEEASDPVTGQESTLPLSPPRNLRISNIGSNSARLAW 556
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
+ ++ Y++ + D E + VE + P KGL P Y +++ ++ +
Sbjct: 557 DAT--STKINGYRIIYNNADGTE-INEVEVDPVTTFP----LKGLTPLTEYTVTILSIYD 609
Query: 264 DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGA 323
+ S P T + T + P + +T +S RV W P E + I V G
Sbjct: 610 EGQSEPLTGVFTTEEV-PAQQYLEIDEVTPDSFRVSWHPLSA-DEGQHKLMWIPVY--GG 665
Query: 324 SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
S+ + D+ + + EGLEPG Y+V + V
Sbjct: 666 STEEVVLQEDQDSY--VIEGLEPGTEYEVSLLAV 697
>UNIPROTKB|Q9P218 [details] [associations]
symbol:COL20A1 "Collagen alpha-1(XX) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0005788 "endoplasmic reticulum lumen"
evidence=TAS] [GO:0030198 "extracellular matrix organization"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=TAS]
InterPro:IPR002035 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092
PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060 SMART:SM00327
Reactome:REACT_118779 GO:GO:0005576 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0030198 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0005788 EMBL:AL121827 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 PROSITE:PS50025
SMART:SM00210 EMBL:BC013658 EMBL:BC019637 EMBL:BC043183
EMBL:AB040943 EMBL:AI272270 IPI:IPI00220445 IPI:IPI00414102
IPI:IPI00414583 RefSeq:NP_065933.2 UniGene:Hs.271285 PDB:2DKM
PDB:2EE3 PDB:2EKJ PDBsum:2DKM PDBsum:2EE3 PDBsum:2EKJ
ProteinModelPortal:Q9P218 SMR:Q9P218 IntAct:Q9P218
PhosphoSite:Q9P218 DMDM:292495087 PaxDb:Q9P218 PRIDE:Q9P218
Ensembl:ENST00000326996 Ensembl:ENST00000358894
Ensembl:ENST00000422202 Ensembl:ENST00000435874 GeneID:57642
KEGG:hsa:57642 UCSC:uc011aau.2 UCSC:uc011aav.2 CTD:57642
GeneCards:GC20P061924 H-InvDB:HIX0015998 HGNC:HGNC:14670
HPA:HPA051962 neXtProt:NX_Q9P218 PharmGKB:PA142672086
eggNOG:NOG318741 HOVERGEN:HBG107744 InParanoid:Q9P218 OMA:EISVPGN
OrthoDB:EOG4R23T0 EvolutionaryTrace:Q9P218 GenomeRNAi:57642
NextBio:64358 ArrayExpress:Q9P218 Bgee:Q9P218 CleanEx:HS_COL20A1
Genevestigator:Q9P218 GermOnline:ENSG00000101203 Uniprot:Q9P218
Length = 1284
Score = 149 (57.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 64/223 (28%), Positives = 99/223 (44%)
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
++ T P PT+L ++ + + ++ W+P + ++ L V S PR + E P
Sbjct: 373 ALDTLP-APTSLVLSQVTSSSIRLSWTP--APRHPLKYLIVWRASRGGTPREV-VVEGPA 428
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNF-TTKPNTPGKFIVWFR-NETTLLVL 202
A L +L Y V +F +Y+ V R TT P P + + T+ +
Sbjct: 429 ASTELHNLASRTEYLVSVFPIYEG--GVGEGLRGLVTTAPLPPPRALTLAAVTPRTVHLT 486
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP-GPAQAAFKGLVPGRAYNISVQTV 261
WQPS A THY V P +P+ E+E E G + GL PGR Y +SVQ++
Sbjct: 487 WQPSAGA---THYLVRCSPA-SPKGE---EEEREVQVGRPEVLLDGLEPGRDYEVSVQSL 539
Query: 262 SEDEISTPTTAQYRTIPLRP---LSFTYDKASITSNSLRVVWE 301
E S + RT L P L F+ ++ ++ RV WE
Sbjct: 540 RGPEGSEARGIRARTPTLAPPRHLGFS----DVSHDAARVFWE 578
>MGI|MGI:1341272 [details] [associations]
symbol:Col14a1 "collagen, type XIV, alpha 1" species:10090
"Mus musculus" [GO:0003229 "ventricular cardiac muscle tissue
development" evidence=IMP] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=IMP]
[GO:0048873 "homeostasis of number of cells within a tissue"
evidence=IMP] [GO:0061050 "regulation of cell growth involved in
cardiac muscle cell development" evidence=IMP] InterPro:IPR002035
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 MGI:MGI:1341272
GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0007155 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 PROSITE:PS50025
SMART:SM00210 HOVERGEN:HBG051060 GeneTree:ENSGT00700000104243
eggNOG:NOG307460 OrthoDB:EOG4PC9R7 EMBL:AY221110 EMBL:AC131337
EMBL:AC133156 EMBL:AK052963 EMBL:AK136987 EMBL:AJ131395
IPI:IPI00330632 IPI:IPI00551330 UniGene:Mm.297859
ProteinModelPortal:Q80X19 SMR:Q80X19 STRING:Q80X19
PhosphoSite:Q80X19 PaxDb:Q80X19 PRIDE:Q80X19
Ensembl:ENSMUST00000023053 UCSC:uc007vsd.2 HOGENOM:HOG000015812
InParanoid:Q80X19 Bgee:Q80X19 CleanEx:MM_COL14A1
Genevestigator:Q80X19 GermOnline:ENSMUSG00000022371 Uniprot:Q80X19
Length = 1797
Score = 149 (57.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 62/277 (22%), Positives = 109/277 (39%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
AS PPT L + + ++ + W+ GK +++ P ++ +
Sbjct: 348 ASALATIGPPTELITSEVTARSFMVNWTQS-PGKVEKYRVVYYPTRGGKPEEVV--VDGS 404
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+ LK+L YQ+ +F+V S T ++ E ++ V W
Sbjct: 405 VSSTVLKNLMSSTEYQIAVFAVSAHTASEGLRGAETTLALPMASDLELYDVTENSMRVRW 464
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKE---GEPPGPAQAAFKGLVPGRAYNISVQT 260
+ P + T Y + P E + EKE GE + + GL P Y ++V
Sbjct: 465 D-AVPGA--TGYLILYAP--LTEGLAGDEKEMKIGETHTDIELS--GLFPNTEYTVTVYA 517
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
+ +E S P T Q T+PL P +++ SNS R+ W+P G + Y++
Sbjct: 518 MFGEEASDPATGQETTLPLTPPR-NLRISNVGSNSARLTWDPASG--KISGYRIVYT--- 571
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
A T I + +P +GL P Y + + ++
Sbjct: 572 -SADGTEINEVEVDPITTFPLKGLTPLTEYSIAIFSI 607
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 56/214 (26%), Positives = 95/214 (44%)
Query: 53 NIEFSEGLPGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWS 111
+IE S P T+Y +Y D T + T P PP NL ++ +A++ W
Sbjct: 499 DIELSGLFPNTEYTVTVYAMFGEEASDPATGQET-TLPLTPPRNLRISNVGSNSARLTWD 557
Query: 112 PPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES 171
P SGK SG+++ V + ++ T I +P + LK LTP Y + +FS+Y+ +S
Sbjct: 558 PA-SGKISGYRI-VYTSADGT--EINEVEVDPITTFPLKGLTPLTEYSIAIFSIYEEGQS 613
Query: 172 VAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLY 230
+ FTT+ +++ +T + V W P A H + I +
Sbjct: 614 LPLVGE-FTTEEVPAQQYLEIDEVKTDSFRVTWHP-LSAEEGQHKLMWIPVYGGKTQEVD 671
Query: 231 VEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
+++E + +GL PG Y +S+ V +D
Sbjct: 672 LKEEQD-----SYVIEGLDPGTEYEVSLLAVLDD 700
Score = 132 (51.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 69/279 (24%), Positives = 117/279 (41%)
Query: 15 IKIPENLSSDN-STYRLDYIPAHGHPPPNT--TYVSRDIKDNIEFSEGLPGTKYDFYLYY 71
+++ ++S N +R+ Y+ A G P T + +++++ LP T+Y +
Sbjct: 752 LRVSWDISDSNVEQFRVTYLKAQGDPMEEVVGTVMVPGVQNSLLLKALLPDTEYKVTVTP 811
Query: 72 TNSTVHDWLTWTA-SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKL--KVISL 128
TV + ++ +A T P P NL V+ +I W PP SG G+++ K +S+
Sbjct: 812 VY-TVGEGVSVSAPGKTLPSSGPQNLRVSEEWYNRVRITWDPP-SGPVKGYRIVYKPVSV 869
Query: 129 SEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGK 188
+T +G N + +L G Y V++F+ S S A T T
Sbjct: 870 PGQTLETFVGADINTIV---MTNLLSGMDYNVKIFASQASGFSDALTGLVQTLFLGVTDL 926
Query: 189 FIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL 248
T+L WQ A+ Y S+ A ES + G G + F GL
Sbjct: 927 QANQVEM-TSLCARWQIHRHATAYRIVLESLQDTQAQESTV----GG---GVNRHCFYGL 978
Query: 249 VPGRAYNISVQTVSEDEISTPTTA---QYRTIPLRPLSF 284
P Y ISV T + E+ P+ + + +++P P +F
Sbjct: 979 QPDSEYKISVYTKLQ-ELEGPSVSIMQKTQSLPTEPPTF 1016
Score = 107 (42.7 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 31/81 (38%), Positives = 40/81 (49%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE-KTPPRIIGFTENPPAGYSLK 150
PPT L NV S + QI W P GK+ G+KL V S KT + +N ++
Sbjct: 32 PPTRLRYNVISHDSIQISWKAP-RGKFGGYKLLVAPASGGKTNQMNL---QNTATKAIIQ 87
Query: 151 DLTPGGSYQVQLFSVYDSKES 171
L P +Y VQL + Y KES
Sbjct: 88 GLLPEQNYTVQLIAYYKDKES 108
Score = 64 (27.6 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 27/108 (25%), Positives = 45/108 (41%)
Query: 213 THYKVSIDPPDAPES---VLYVEKEGEP----------PGPAQAAF-KGLVPGRAYNISV 258
T +VS D D+ V Y++ +G+P PG + K L+P Y ++V
Sbjct: 750 TSLRVSWDISDSNVEQFRVTYLKAQGDPMEEVVGTVMVPGVQNSLLLKALLPDTEYKVTV 809
Query: 259 QTVSEDEISTPTTAQYRTIPLR-PLSFTYDKASITSNSLRVVWEPPKG 305
V +A +T+P P + + N +R+ W+PP G
Sbjct: 810 TPVYTVGEGVSVSAPGKTLPSSGPQNLRVSEEWY--NRVRITWDPPSG 855
>MGI|MGI:1920618 [details] [associations]
symbol:Col20a1 "collagen, type XX, alpha 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002035 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092
PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060 SMART:SM00327
MGI:MGI:1920618 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 PROSITE:PS50025
EMBL:BX649560 SMART:SM00210 GeneTree:ENSGT00700000104243
HOGENOM:HOG000015812 CTD:57642 eggNOG:NOG318741 HOVERGEN:HBG107744
OMA:EISVPGN OrthoDB:EOG4R23T0 EMBL:AL450341 EMBL:BC016112
EMBL:BC030415 EMBL:AK006759 IPI:IPI00222238 IPI:IPI00880443
RefSeq:NP_082794.1 UniGene:Mm.345095 ProteinModelPortal:Q923P0
SMR:Q923P0 PRIDE:Q923P0 Ensembl:ENSMUST00000108856 GeneID:73368
KEGG:mmu:73368 UCSC:uc008okp.2 InParanoid:Q9D9L7 NextBio:338089
Bgee:Q923P0 CleanEx:MM_COL20A1 Genevestigator:Q923P0
GermOnline:ENSMUSG00000016356 Uniprot:Q923P0
Length = 1320
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/220 (24%), Positives = 91/220 (41%)
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK--TPPRIIGFTENP 143
+ P PT L + + + + W+P + Y K ++ + P ++ E P
Sbjct: 371 VLDPLPTPTRLILTHATSSSIHLSWTPAL---YPPLKYLIVWQPSRGGAPKEVV--VEGP 425
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+ L +LT Y V + VY+S + R T PG + TL V W
Sbjct: 426 VSSMELGNLTSSTEYLVSVLPVYESGVGKSLQGRATTAPLPPPGPLTLAAVTPRTLHVTW 485
Query: 204 QPSYPASIY-THYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
PS + Y Y ++ + + ++V G+P + GL PG+ Y++SVQ++
Sbjct: 486 PPSAGVTQYLVQYLLATSTGEEQKREVHV---GQP----EVLLDGLEPGQDYDVSVQSLR 538
Query: 263 EDEISTPTTAQYRTIPLRP-LSFTYDKASITSNSLRVVWE 301
E S + + RT L P T+ + + NS V WE
Sbjct: 539 GPEASEVQSIRARTSALGPPRHLTF--SDVRYNSTCVSWE 576
Score = 109 (43.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 50/181 (27%), Positives = 80/181 (44%)
Query: 185 TPGKFIVWFRNETTLLVLWQPS-YPASIYTHYKVSIDPP--DAPESVLYVEKEGEPPGPA 241
TP + I+ +++ + W P+ YP Y + P AP+ V+ VE GP
Sbjct: 377 TPTRLILTHATSSSIHLSWTPALYPP---LKYLIVWQPSRGGAPKEVV-VE------GPV 426
Query: 242 QAAFKG-LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVW 300
+ G L Y +SV V E + + T PL P A++T +L V W
Sbjct: 427 SSMELGNLTSSTEYLVSVLPVYESGVGKSLQGRATTAPLPPPG-PLTLAAVTPRTLHVTW 485
Query: 301 EPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPT-QCD-MSEGLEPGRTYQVLVKTVS 358
P G ++ Y V + A+ST + R+ Q + + +GLEPG+ Y V V+++
Sbjct: 486 PPSAGVTQ---YLVQYLL----ATSTGEEQKREVHVGQPEVLLDGLEPGQDYDVSVQSLR 538
Query: 359 G 359
G
Sbjct: 539 G 539
Score = 60 (26.2 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 107 QIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166
Q+ W G GF ++V ++ +I T+ P A ++ L P SY +Q+F +
Sbjct: 42 QMKWREA-EGSGLGFLVQVTPMAGDLEQELILTTKTPKA--TVGGLNPSKSYTLQIFELT 98
Query: 167 DS 168
DS
Sbjct: 99 DS 100
>UNIPROTKB|F1LMG8 [details] [associations]
symbol:Sned1 "Sushi, nidogen and EGF-like domain-containing
protein 1" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR003886 InterPro:IPR003961 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00041 Pfam:PF06119 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220 SMART:SM00060
SMART:SM00179 SMART:SM00181 SMART:SM00539 InterPro:IPR000152
RGD:1566079 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0007160 PROSITE:PS00010 InterPro:IPR000436 SMART:SM00032
SUPFAM:SSF57535 PROSITE:PS50923 Pfam:PF12661 IPI:IPI00768542
Ensembl:ENSRNOT00000022479 ArrayExpress:F1LMG8 Uniprot:F1LMG8
Length = 1402
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 73/282 (25%), Positives = 118/282 (41%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYS 148
PPT L V I WSPP G + L V S R F + + +
Sbjct: 907 PPTALRVERVEESGVSISWSPP-EGTTARQVLDGYAVTYASSDGSSRRTDFVDRSRSSHQ 965
Query: 149 LKDLTPGGSYQVQLFSVY---DSKESVAYTSRNFT-TKPNTPGKFIVWFRNETTLLVLWQ 204
L+ L G +Y + +FSV ++K ++ + T T+P F V + + V W
Sbjct: 966 LRALAAGRAYNISVFSVKRNTNNKNDISRPAALLTRTRPRPIEDFEVTNISANAISVQWA 1025
Query: 205 -PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
+ + +VS+ P+ ++V V+ + F L+PGR Y++ + T+S
Sbjct: 1026 LHRIQHATVSRVRVSVLYPE--DTV--VQSTEVDRSVDRLTFGDLLPGRRYSVRLTTLSG 1081
Query: 264 DEISTPTTAQYRTIPL----RPLSFTYDKAS-ITSNSLRVVWEPPKGFSEFDKYQVSINV 318
+ T + PL RPL AS +T+ S +VW+PP + Y +++
Sbjct: 1082 PGGAEYPTESLASAPLNVWTRPLPPANLTASRVTATSAHMVWDPPTPGISLEAYVINV-- 1139
Query: 319 RRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
+++ TKSR P +S L PGR YQ+ V V
Sbjct: 1140 -----TTSQNTKSRYIPNGKLVSYTVRDLMPGRRYQLSVTAV 1176
>RGD|1566079 [details] [associations]
symbol:Sned1 "sushi, nidogen and EGF-like domains 1"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR003886 InterPro:IPR003961
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00041 Pfam:PF06119
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220
SMART:SM00060 SMART:SM00179 SMART:SM00181 SMART:SM00539
InterPro:IPR000152 RGD:1566079 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0007160 PROSITE:PS00010
InterPro:IPR000436 SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923
HSSP:P00740 Pfam:PF12661 eggNOG:NOG242910 HOVERGEN:HBG108495
OrthoDB:EOG4K0QMM HOGENOM:HOG000081748 EMBL:AABR03068156
EMBL:AABR03069106 EMBL:AABR03069488 EMBL:AABR03071665
EMBL:AABR03072503 EMBL:AF439715 EMBL:AF439719 IPI:IPI00768542
UniGene:Rn.23447 ProteinModelPortal:Q5ZQU0 SMR:Q5ZQU0
PhosphoSite:Q5ZQU0 PRIDE:Q5ZQU0 UCSC:RGD:1566079 InParanoid:Q5ZQU0
NextBio:671111 ArrayExpress:Q5ZQU0 Genevestigator:Q5ZQU0
Uniprot:Q5ZQU0
Length = 1403
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 73/282 (25%), Positives = 118/282 (41%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYS 148
PPT L V I WSPP G + L V S R F + + +
Sbjct: 908 PPTALRVERVEESGVSISWSPP-EGTTARQVLDGYAVTYASSDGSSRRTDFVDRSRSSHQ 966
Query: 149 LKDLTPGGSYQVQLFSVY---DSKESVAYTSRNFT-TKPNTPGKFIVWFRNETTLLVLWQ 204
L+ L G +Y + +FSV ++K ++ + T T+P F V + + V W
Sbjct: 967 LRALAAGRAYNISVFSVKRNTNNKNDISRPAALLTRTRPRPIEDFEVTNISANAISVQWA 1026
Query: 205 -PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
+ + +VS+ P+ ++V V+ + F L+PGR Y++ + T+S
Sbjct: 1027 LHRIQHATVSRVRVSVLYPE--DTV--VQSTEVDRSVDRLTFGDLLPGRRYSVRLTTLSG 1082
Query: 264 DEISTPTTAQYRTIPL----RPLSFTYDKAS-ITSNSLRVVWEPPKGFSEFDKYQVSINV 318
+ T + PL RPL AS +T+ S +VW+PP + Y +++
Sbjct: 1083 PGGAEYPTESLASAPLNVWTRPLPPANLTASRVTATSAHMVWDPPTPGISLEAYVINV-- 1140
Query: 319 RRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
+++ TKSR P +S L PGR YQ+ V V
Sbjct: 1141 -----TTSQNTKSRYIPNGKLVSYTVRDLMPGRRYQLSVTAV 1177
>UNIPROTKB|B5MEF5 [details] [associations]
symbol:SNED1 "Sushi, nidogen and EGF-like domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR003886 InterPro:IPR003961 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00041 Pfam:PF06119 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220 SMART:SM00060
SMART:SM00179 SMART:SM00181 SMART:SM00539 InterPro:IPR000152
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 GO:GO:0007160
InterPro:IPR003645 SMART:SM00274 PROSITE:PS00010 EMBL:AC005237
InterPro:IPR000436 SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923
Pfam:PF12661 EMBL:AC093585 EMBL:AC104809 IPI:IPI00152789
HGNC:HGNC:24696 HOVERGEN:HBG108495 HOGENOM:HOG000081748
ProteinModelPortal:B5MEF5 SMR:B5MEF5 STRING:B5MEF5 PRIDE:B5MEF5
Ensembl:ENST00000342631 ArrayExpress:B5MEF5 Bgee:B5MEF5
Uniprot:B5MEF5
Length = 1380
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 74/286 (25%), Positives = 121/286 (42%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYS 148
PPT L + I W+PP +G + L V +S R F + + +
Sbjct: 908 PPTALKMERVEESGVSISWNPP-NGPAARQMLDGYAVTYVSSDGSYRRTDFVDRTRSSHQ 966
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQ 204
L+ L G +Y + +FSV + + SR T+P F V +T+ V W
Sbjct: 967 LQALAAGRAYNISVFSVKRNSNNKNDISRPAVLLARTRPRPVEGFEVTNVTASTISVQWA 1026
Query: 205 -PSYPASIYTHYKVSIDPPDA-PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
+ + +VSI P+A + V++ + + F+ L+PG+ Y I + T+S
Sbjct: 1027 LHRIRHATVSGVRVSIRHPEALRDQATDVDRSVD-----RFTFRALLPGKRYTIQLTTLS 1081
Query: 263 --------EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+ ++T T + T PL P + T A +T+ S VVW+ P S + Y +
Sbjct: 1082 GLRGEEHPTESLATAPTHVW-TRPLPPANLT--AARVTATSAHVVWDAPTPGSLLEAYVI 1138
Query: 315 SINVRRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
++ +++ TKSR P S L PGR YQ+ V V
Sbjct: 1139 NV-------TTSQSTKSRYVPNGKLASYTVRDLLPGRRYQLSVIAV 1177
>UNIPROTKB|Q8TER0 [details] [associations]
symbol:SNED1 "Sushi, nidogen and EGF-like domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR003886
InterPro:IPR003961 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00041
Pfam:PF06119 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50853
PROSITE:PS51220 SMART:SM00060 SMART:SM00179 SMART:SM00181
SMART:SM00539 InterPro:IPR000152 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0007160 InterPro:IPR003645
SMART:SM00274 PROSITE:PS00010 EMBL:AC005237 InterPro:IPR000436
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 HSSP:P00740
Pfam:PF12661 EMBL:AC093585 EMBL:AC104809 EMBL:AK074062
EMBL:AK074075 EMBL:AF439717 EMBL:AF439718 EMBL:BC027939
IPI:IPI00152789 IPI:IPI00827714 IPI:IPI00855880 IPI:IPI00856022
RefSeq:NP_001073906.1 UniGene:Hs.471834 ProteinModelPortal:Q8TER0
SMR:Q8TER0 STRING:Q8TER0 PhosphoSite:Q8TER0 DMDM:158563933
PaxDb:Q8TER0 PRIDE:Q8TER0 Ensembl:ENST00000310397
Ensembl:ENST00000401884 Ensembl:ENST00000405547 GeneID:25992
KEGG:hsa:25992 UCSC:uc002wah.1 CTD:25992 GeneCards:GC02P241938
H-InvDB:HIX0002988 HGNC:HGNC:24696 HPA:HPA036414 HPA:HPA036415
neXtProt:NX_Q8TER0 PharmGKB:PA134946370 eggNOG:NOG242910
HOVERGEN:HBG108495 InParanoid:Q8TER0 OrthoDB:EOG4K0QMM
GenomeRNAi:25992 NextBio:47694 ArrayExpress:Q8TER0 Bgee:Q8TER0
CleanEx:HS_SNED1 Genevestigator:Q8TER0 Uniprot:Q8TER0
Length = 1413
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 74/286 (25%), Positives = 121/286 (42%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYS 148
PPT L + I W+PP +G + L V +S R F + + +
Sbjct: 908 PPTALKMERVEESGVSISWNPP-NGPAARQMLDGYAVTYVSSDGSYRRTDFVDRTRSSHQ 966
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQ 204
L+ L G +Y + +FSV + + SR T+P F V +T+ V W
Sbjct: 967 LQALAAGRAYNISVFSVKRNSNNKNDISRPAVLLARTRPRPVEGFEVTNVTASTISVQWA 1026
Query: 205 -PSYPASIYTHYKVSIDPPDA-PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
+ + +VSI P+A + V++ + + F+ L+PG+ Y I + T+S
Sbjct: 1027 LHRIRHATVSGVRVSIRHPEALRDQATDVDRSVD-----RFTFRALLPGKRYTIQLTTLS 1081
Query: 263 --------EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
+ ++T T + T PL P + T A +T+ S VVW+ P S + Y +
Sbjct: 1082 GLRGEEHPTESLATAPTHVW-TRPLPPANLT--AARVTATSAHVVWDAPTPGSLLEAYVI 1138
Query: 315 SINVRRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
++ +++ TKSR P S L PGR YQ+ V V
Sbjct: 1139 NV-------TTSQSTKSRYVPNGKLASYTVRDLLPGRRYQLSVIAV 1177
>RGD|1305806 [details] [associations]
symbol:Col14a1 "collagen, type XIV, alpha 1" species:10116
"Rattus norvegicus" [GO:0003229 "ventricular cardiac muscle tissue
development" evidence=ISO] [GO:0005614 "interstitial matrix"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0030199 "collagen fibril organization" evidence=ISO]
[GO:0048873 "homeostasis of number of cells within a tissue"
evidence=ISO] [GO:0061050 "regulation of cell growth involved in
cardiac muscle cell development" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] InterPro:IPR002035
InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 RGD:1305806
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00210 IPI:IPI00360766
Ensembl:ENSRNOT00000034558 UCSC:RGD:1305806 ArrayExpress:D4A301
Uniprot:D4A301
Length = 1781
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 62/277 (22%), Positives = 109/277 (39%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
AS PPT L + + ++ + W+ GK +++ P ++ +
Sbjct: 348 ASALATIGPPTELITSEVTARSFMVNWTHS-PGKVEKYRVVYYPTRGGKPEEVVA--DGR 404
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+ LK+L YQ+ +F+V S T ++ E ++ V W
Sbjct: 405 VSSIVLKNLMSSTEYQIAVFAVSAHTASEGLRGTETTLALPMASDLELYDVTENSMRVKW 464
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKE---GEPPGPAQAAFKGLVPGRAYNISVQT 260
+ P + T Y + P E + EKE GE + + GL P Y ++V
Sbjct: 465 D-AVPGA--TGYLILYAP--LTEGLAGDEKEMKIGETHTDIELS--GLFPNTEYTVTVYA 517
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
+ +E S P T Q T+PL P +++ SNS R+ W+P G + Y++
Sbjct: 518 MFGEEASDPATGQETTLPLTPPR-NLRISNVGSNSARLTWDPTSG--KITGYRIVYT--- 571
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
A T I + +P +GL P Y + + ++
Sbjct: 572 -SADGTEINEVEVDPITTFPLKGLTPLTDYSIAIFSI 607
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 55/214 (25%), Positives = 95/214 (44%)
Query: 53 NIEFSEGLPGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWS 111
+IE S P T+Y +Y D T + T P PP NL ++ +A++ W
Sbjct: 499 DIELSGLFPNTEYTVTVYAMFGEEASDPATGQET-TLPLTPPRNLRISNVGSNSARLTWD 557
Query: 112 PPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES 171
P SGK +G+++ V + ++ T I +P + LK LTP Y + +FS+Y+ +S
Sbjct: 558 PT-SGKITGYRI-VYTSADGT--EINEVEVDPITTFPLKGLTPLTDYSIAIFSIYEEGQS 613
Query: 172 VAYTSRNFTTKPNTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLY 230
+ FTT+ +++ +T + V W P A H + I +
Sbjct: 614 LPLVGE-FTTEEVPAQQYLEIDEVKTDSFRVTWHP-LSAEEGQHKLMWIPVYGGKTQEVA 671
Query: 231 VEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
+++E + +GL PG Y +S+ V +D
Sbjct: 672 LKEEQD-----SYVVEGLDPGTEYEVSLLAVLDD 700
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 72/336 (21%), Positives = 135/336 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNS-TVHDWLTWTASI 86
YR+ Y P G P R +I + T+Y ++ ++ T + L T +
Sbjct: 384 YRVVYYPTRGGKPEEVVADGR--VSSIVLKNLMSSTEYQIAVFAVSAHTASEGLRGTETT 441
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE----KTPPRIIGFTEN 142
P ++L + + + ++ W + G +G+ + L+E IG T
Sbjct: 442 LALP-MASDLELYDVTENSMRVKWDA-VPGA-TGYLILYAPLTEGLAGDEKEMKIGETHT 498
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI-VWFRNETTLLV 201
L L P Y V +++++ + S T + TT P TP + + + + +
Sbjct: 499 D---IELSGLFPNTEYTVTVYAMFGEEASDPATGQE-TTLPLTPPRNLRISNVGSNSARL 554
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
W P+ + T Y++ D E + VE + P KGL P Y+I++ ++
Sbjct: 555 TWDPT--SGKITGYRIVYTSADGTE-INEVEVDPITTFP----LKGLTPLTDYSIAIFSI 607
Query: 262 SEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRP 321
E+ S P ++ T + P + + ++S RV W P E + I V
Sbjct: 608 YEEGQSLPLVGEFTTEEV-PAQQYLEIDEVKTDSFRVTWHPLSA-EEGQHKLMWIPVY-- 663
Query: 322 GASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
G + + ++ + + EGL+PG Y+V + V
Sbjct: 664 GGKTQEVALKEEQDSY--VVEGLDPGTEYEVSLLAV 697
Score = 126 (49.4 bits), Expect = 0.00030, P = 0.00030
Identities = 68/279 (24%), Positives = 116/279 (41%)
Query: 15 IKIPENLSSDN-STYRLDYIPAHGHPPPNT--TYVSRDIKDNIEFSEGLPGTKYDFYLYY 71
+++ ++S N +R+ Y+ A G P T + +++++ LP T+Y +
Sbjct: 752 LRVTWDISDSNVEHFRVTYLTAQGDPKEEVVGTVMVPGVQNSLLLKNLLPDTEYKVTVTP 811
Query: 72 TNSTVHDWLTWTA-SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKL--KVISL 128
TV + ++ +A T P P NL V+ +I W PP S G+++ K +S+
Sbjct: 812 IY-TVGEGVSVSAPGKTLPTSGPQNLRVSEEWYNRLRITWDPP-SAPVKGYRIVYKPVSV 869
Query: 129 SEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGK 188
+T +G N + +L G Y V++F+ + S A T T
Sbjct: 870 PGQTLETFVGADVNTIV---MTNLLSGMDYNVKIFASQAAGYSDALTGLVQTLFLGVTDL 926
Query: 189 FIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL 248
T+L WQ A+ Y S+ A ES + G G + F GL
Sbjct: 927 QANQVEM-TSLCARWQIHRHATAYRIVLESLQDTQAQESTV----GG---GVNRHCFYGL 978
Query: 249 VPGRAYNISVQTVSEDEISTPTTA---QYRTIPLRPLSF 284
P Y ISV T + EI P+ + + +++P P +F
Sbjct: 979 QPDSEYKISVYTKLQ-EIEGPSVSIMQKTQSLPTEPPTF 1016
>UNIPROTKB|E1BB79 [details] [associations]
symbol:E1BB79 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0016049 "cell
growth" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181 INTERPRO:IPR020837
GO:GO:0007165 GO:GO:0005615 GO:GO:0009986 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0016049 SUPFAM:SSF49265
GO:GO:0005578 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409
PROSITE:PS01186 GO:GO:0007160 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 InterPro:IPR013111
Pfam:PF07974 GeneTree:ENSGT00700000104067 OMA:NTKAPTD
EMBL:DAAA02043367 IPI:IPI00709334 ProteinModelPortal:E1BB79
Ensembl:ENSBTAT00000020785 Uniprot:E1BB79
Length = 1558
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 65/265 (24%), Positives = 107/265 (40%)
Query: 93 PTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDL 152
P L + + + + W P S + + L L ++ + I + Y + L
Sbjct: 264 PQGLQLLKSTEDSLLVSWEP--SSQVDHYLLSYYPLGKELSVKQIKVPKEQHR-YEILGL 320
Query: 153 TPGGSYQVQLFSVYDSKESVAYTSRNF--TTKPNTPGKFIVWFRNETTLLVLWQPSYPAS 210
PG Y V L +V K+ ++ + ++ TT PG V E +L V W+ P +
Sbjct: 321 LPGTKYIVTLRNV---KKDISSSPQHLLATTDLAVPGTAWVTDETENSLDVEWEN--PLT 375
Query: 211 IYTHYKVSIDPPDAPE-SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTP 269
+YK+ P E + + V K G+P ++ GL PG Y I+V + D P
Sbjct: 376 EVDYYKLQYGPLTGQEVAEVTVPKSGDPK--SRYDITGLQPGTEYKITVIPMRGDLEGKP 433
Query: 270 TTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT 329
RT P + D+ +T +++ V W+P + DKY V + G +
Sbjct: 434 ILLNGRTEIDSPTNVVTDR--VTEDTVAVSWDPVRAV--IDKYMVRY-ISADGETKDTAV 488
Query: 330 KSRDEPTQCDMSEGLEPGRTYQVLV 354
T + GL PG Y+V V
Sbjct: 489 PREQNST---VLTGLRPGEAYEVYV 510
Score = 144 (55.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 70/328 (21%), Positives = 121/328 (36%)
Query: 19 ENLSSDNSTYRLDYIPAHGHPPPNTTYV-SRDIKDNIEFSEGLPGTKYDFYLYYTNSTVH 77
EN ++ Y+L Y P G T S D K + + PGT+Y + +
Sbjct: 371 ENPLTEVDYYKLQYGPLTGQEVAEVTVPKSGDPKSRYDITGLQPGTEYKITVIPMRGDL- 429
Query: 78 DWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRII 137
+ + T D PTN+ + + T + W P + + ++ IS +T +
Sbjct: 430 EGKPILLNGRTEIDSPTNVVTDRVTEDTVAVSWDP-VRAVIDKYMVRYISADGETKDTAV 488
Query: 138 GFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNET 197
+N L L PG +Y+V +++ ++ S + T + ++P + E
Sbjct: 489 PREQNSTV---LTGLRPGEAYEVYVWAERGNQGSKKVDTTALT-EIDSPQNLVTEQVTEN 544
Query: 198 TLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
T V W P ++ Y V D + V KE + GL PG Y +
Sbjct: 545 TATVSWDPVQ--AVIDRYLVRYISADGDTREVPVGKE-----QSSTVLTGLRPGVEYTVH 597
Query: 258 VQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
V D S + T P + ++ +T N+ V W P + + D+Y VS
Sbjct: 598 VWAQKGDRESRKADTKAPTEIDSPQNLVTEQ--VTENTATVSWAPVQ--AGIDRYLVSYT 653
Query: 318 VRRPGASSTPITKSRDEPTQCDMSEGLE 345
P+ K + + G+E
Sbjct: 654 SADGDTREVPVGKEQSSTVLTGLRPGVE 681
Score = 139 (54.0 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 48/166 (28%), Positives = 80/166 (48%)
Query: 196 ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
E +LLV W+PS S HY +S P SV ++ P + GL+PG Y
Sbjct: 274 EDSLLVSWEPS---SQVDHYLLSYYPLGKELSVKQIKV---PKEQHRYEILGLLPGTKYI 327
Query: 256 ISVQTVSEDEISTPTTAQYRT-IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314
++++ V +D S+P T + + ++ D+ T NSL V WE P +E D Y++
Sbjct: 328 VTLRNVKKDISSSPQHLLATTDLAVPGTAWVTDE---TENSLDVEWENP--LTEVDYYKL 382
Query: 315 SIN-VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ + + KS D ++ D++ GL+PG Y++ V + G
Sbjct: 383 QYGPLTGQEVAEVTVPKSGDPKSRYDIT-GLQPGTEYKITVIPMRG 427
>UNIPROTKB|G8JL96 [details] [associations]
symbol:PTPRS "Receptor-type tyrosine-protein phosphatase S"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
EMBL:AC022517 EMBL:AC005335 EMBL:AC005790 EMBL:AC005338
EMBL:AC005788 EMBL:AC118535 HGNC:HGNC:9681
ProteinModelPortal:G8JL96 SMR:G8JL96 Ensembl:ENST00000262963
Bgee:G8JL96 Uniprot:G8JL96
Length = 1928
Score = 153 (58.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 83/332 (25%), Positives = 136/332 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEG--LPGTKYDFYLYYTNSTVHDWLTWTAS 85
YR+ Y HP N + ++ D++ + G L Y + S L+
Sbjct: 456 YRVYYTMEPEHPVGN--WQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQ 513
Query: 86 ITTP---PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+ T P P NL RS + + WSPP + S K +++ E R +G T +
Sbjct: 514 VKTQQGVPGQPMNLRAEARSETSITLSWSPP--RQESIIKYELL-FREGDHGREVGRTFD 570
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYT----SRNFTTKPNTPGKFI--VWFRN 195
P Y ++DL P Y +L + S + + A+T R +KP+ P + + V R+
Sbjct: 571 PTTSYVVEDLKPNTEYAFRLAA--RSPQGLGAFTPVVRQRTLQSKPSAPPQDVKCVSVRS 628
Query: 196 ETTLLVLWQPSYPAS---IYTHYKVSIDP--PDAPESVLYVEKEGEPPGPAQAAFKGLVP 250
T +LV W+P P + Y V P + PE E G PP Q + L
Sbjct: 629 -TAILVSWRPPPPETHNGALVGYSVRYRPLGSEDPEPK---EVNGIPPTTTQILLEALEK 684
Query: 251 GRAYNISVQTVSEDEI-----STPTTAQY-RTIPLRPLSFTYDKASITSNSLRVVWEPP- 303
Y I+ TV+ E+ S+P + +P P + ++ + ++RV+W P
Sbjct: 685 WTQYRIT--TVAHTEVGPGPESSPVVVRTDEDVPSAPPR-KVEAEALNATAIRVLWRSPA 741
Query: 304 --KGFSEFDKYQVSINVRRPGASSTPITKSRD 333
+ + YQV VR GA + + +D
Sbjct: 742 PGRQHGQIRGYQVHY-VRMEGAEARGPPRIKD 772
Score = 41 (19.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 341 SEGLEPGRTYQVLVKTVSGK 360
+ GLEPG Y + V V K
Sbjct: 1229 NRGLEPGHRYVLFVLAVLQK 1248
>UNIPROTKB|Q13332 [details] [associations]
symbol:PTPRS "Receptor-type tyrosine-protein phosphatase S"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021766
"hippocampus development" evidence=IEA] [GO:0021987 "cerebral
cortex development" evidence=IEA] [GO:0022038 "corpus callosum
development" evidence=IEA] [GO:0005001 "transmembrane receptor
protein tyrosine phosphatase activity" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 GO:GO:0021987 GO:GO:0021766
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0007155 EMBL:CH471139
GO:GO:0021549 GO:GO:0021510 InterPro:IPR013098 Pfam:PF07679
GO:GO:0022038 eggNOG:COG5599 HOGENOM:HOG000010250 GO:GO:0005001
HOVERGEN:HBG053758 EMBL:U35234 EMBL:U40317 EMBL:AC005335
EMBL:AC005790 EMBL:AC005338 EMBL:AC005788 EMBL:AC118535
EMBL:BC104812 EMBL:BC143287 EMBL:S78080 IPI:IPI00289831
IPI:IPI00293275 IPI:IPI00299590 IPI:IPI00332271 IPI:IPI00332272
IPI:IPI00332273 IPI:IPI00743517 RefSeq:NP_002841.3
RefSeq:NP_570923.2 RefSeq:NP_570924.2 RefSeq:NP_570925.2
UniGene:Hs.644384 PDB:2FH7 PDB:2YD2 PDB:2YD3 PDB:2YD9 PDBsum:2FH7
PDBsum:2YD2 PDBsum:2YD3 PDBsum:2YD9 ProteinModelPortal:Q13332
SMR:Q13332 IntAct:Q13332 MINT:MINT-1349588 STRING:Q13332
PhosphoSite:Q13332 DMDM:50403770 PaxDb:Q13332 PRIDE:Q13332
DNASU:5802 Ensembl:ENST00000348075 Ensembl:ENST00000353284
Ensembl:ENST00000357368 GeneID:5802 KEGG:hsa:5802 UCSC:uc002mbv.3
UCSC:uc002mbw.3 UCSC:uc002mby.3 CTD:5802 GeneCards:GC19M005157
HGNC:HGNC:9681 MIM:601576 neXtProt:NX_Q13332 PharmGKB:PA34026
InParanoid:Q13332 KO:K06778 EvolutionaryTrace:Q13332
GenomeRNAi:5802 NextBio:22612 ArrayExpress:Q13332 Bgee:Q13332
CleanEx:HS_PTPRS Genevestigator:Q13332 GermOnline:ENSG00000105426
Uniprot:Q13332
Length = 1948
Score = 153 (58.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 83/332 (25%), Positives = 136/332 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEG--LPGTKYDFYLYYTNSTVHDWLTWTAS 85
YR+ Y HP N + ++ D++ + G L Y + S L+
Sbjct: 460 YRVYYTMEPEHPVGN--WQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQ 517
Query: 86 ITTP---PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+ T P P NL RS + + WSPP + S K +++ E R +G T +
Sbjct: 518 VKTQQGVPGQPMNLRAEARSETSITLSWSPP--RQESIIKYELL-FREGDHGREVGRTFD 574
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYT----SRNFTTKPNTPGKFI--VWFRN 195
P Y ++DL P Y +L + S + + A+T R +KP+ P + + V R+
Sbjct: 575 PTTSYVVEDLKPNTEYAFRLAA--RSPQGLGAFTPVVRQRTLQSKPSAPPQDVKCVSVRS 632
Query: 196 ETTLLVLWQPSYPAS---IYTHYKVSIDP--PDAPESVLYVEKEGEPPGPAQAAFKGLVP 250
T +LV W+P P + Y V P + PE E G PP Q + L
Sbjct: 633 -TAILVSWRPPPPETHNGALVGYSVRYRPLGSEDPEPK---EVNGIPPTTTQILLEALEK 688
Query: 251 GRAYNISVQTVSEDEI-----STPTTAQY-RTIPLRPLSFTYDKASITSNSLRVVWEPP- 303
Y I+ TV+ E+ S+P + +P P + ++ + ++RV+W P
Sbjct: 689 WTQYRIT--TVAHTEVGPGPESSPVVVRTDEDVPSAPPR-KVEAEALNATAIRVLWRSPA 745
Query: 304 --KGFSEFDKYQVSINVRRPGASSTPITKSRD 333
+ + YQV VR GA + + +D
Sbjct: 746 PGRQHGQIRGYQVHY-VRMEGAEARGPPRIKD 776
Score = 41 (19.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 341 SEGLEPGRTYQVLVKTVSGK 360
+ GLEPG Y + V V K
Sbjct: 1233 NRGLEPGHRYVLFVLAVLQK 1252
>UNIPROTKB|E9PDC5 [details] [associations]
symbol:PTPRS "Receptor-type tyrosine-protein phosphatase S"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
EMBL:AC022517 EMBL:AC005335 EMBL:AC005790 EMBL:AC005338
EMBL:AC005788 EMBL:AC118535 HGNC:HGNC:9681 OMA:TTMIVQW
IPI:IPI00642154 ProteinModelPortal:E9PDC5 SMR:E9PDC5
Ensembl:ENST00000372412 ArrayExpress:E9PDC5 Bgee:E9PDC5
Uniprot:E9PDC5
Length = 1949
Score = 153 (58.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 83/332 (25%), Positives = 136/332 (40%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEG--LPGTKYDFYLYYTNSTVHDWLTWTAS 85
YR+ Y HP N + ++ D++ + G L Y + S L+
Sbjct: 461 YRVYYTMEPEHPVGN--WQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQ 518
Query: 86 ITTP---PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+ T P P NL RS + + WSPP + S K +++ E R +G T +
Sbjct: 519 VKTQQGVPGQPMNLRAEARSETSITLSWSPP--RQESIIKYELL-FREGDHGREVGRTFD 575
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYT----SRNFTTKPNTPGKFI--VWFRN 195
P Y ++DL P Y +L + S + + A+T R +KP+ P + + V R+
Sbjct: 576 PTTSYVVEDLKPNTEYAFRLAA--RSPQGLGAFTPVVRQRTLQSKPSAPPQDVKCVSVRS 633
Query: 196 ETTLLVLWQPSYPAS---IYTHYKVSIDP--PDAPESVLYVEKEGEPPGPAQAAFKGLVP 250
T +LV W+P P + Y V P + PE E G PP Q + L
Sbjct: 634 -TAILVSWRPPPPETHNGALVGYSVRYRPLGSEDPEPK---EVNGIPPTTTQILLEALEK 689
Query: 251 GRAYNISVQTVSEDEI-----STPTTAQY-RTIPLRPLSFTYDKASITSNSLRVVWEPP- 303
Y I+ TV+ E+ S+P + +P P + ++ + ++RV+W P
Sbjct: 690 WTQYRIT--TVAHTEVGPGPESSPVVVRTDEDVPSAPPR-KVEAEALNATAIRVLWRSPA 746
Query: 304 --KGFSEFDKYQVSINVRRPGASSTPITKSRD 333
+ + YQV VR GA + + +D
Sbjct: 747 PGRQHGQIRGYQVHY-VRMEGAEARGPPRIKD 777
Score = 41 (19.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 341 SEGLEPGRTYQVLVKTVSGK 360
+ GLEPG Y + V V K
Sbjct: 1234 NRGLEPGHRYVLFVLAVLQK 1253
>UNIPROTKB|J9P2Q4 [details] [associations]
symbol:PTPRH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00700000104388 EMBL:AAEX03000734
Ensembl:ENSCAFT00000045948 Uniprot:J9P2Q4
Length = 718
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 72/311 (23%), Positives = 123/311 (39%)
Query: 16 KIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNST 75
K P + S TY + + P GHP T +R +E PGT Y+ ++ +
Sbjct: 24 KAPTDFHSQTYTYWVQWAPG-GHPQIGRTNETRYEVQALE-----PGTLYNLSMWAERNN 77
Query: 76 VHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR 135
W + +T P+ T+L ++ + + W+ P+ + V + E
Sbjct: 78 AASWAQ-SLLASTVPNAVTSLGTQDQTNSSITLSWTAPLGPDQPPYTYWVSWVKEGIIA- 135
Query: 136 IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN 195
I + P +LK+L G Y F+V+ + V+ SR T + P + + N
Sbjct: 136 -INTQDTPDTSITLKELEAGSLYT---FTVWAERNGVSSDSRTLT-EATAPNR-VTDLHN 189
Query: 196 ET----TLLVLWQ-PS-YPASIYTHYKVSIDPPDAPESVLYV-EKEGEPPGPAQAA---F 245
ET ++ + W+ P+ + + YT++ V P P+ E + G
Sbjct: 190 ETQTNSSITLEWKAPTDFHSQTYTYW-VQWAPGGHPQGEQDPQEHQASQIGRTNETRYEV 248
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVV--WEPP 303
+ L PG YN+SV + S + T P P+ T TS V+ W P
Sbjct: 249 QALEPGTLYNLSVWAERNNVTSWAQSLLASTAP-SPV--TIMSCISTSGGYGVILTWSCP 305
Query: 304 KGFSEFDKYQV 314
+G E ++QV
Sbjct: 306 QGGYEAFEWQV 316
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 148 (57.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 74/300 (24%), Positives = 129/300 (43%)
Query: 78 DWLTWTASITTPPD--PPTNLSVNVRSG---KTAQIFWSPPI--SGK---YSGFKLKVIS 127
DW T+ ++ P PP +L V + G T + W+ P+ +G+ Y ++ ++ +
Sbjct: 4623 DW-TFIETLEVAPQQQPPPHLEVQMAPGGFQPTVSLLWTGPLQPNGRVLYYELYRRQIAT 4681
Query: 128 LSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP- 186
EK+ P ++ + + + + +L P Y+ Q+++V + ++ + +R T P P
Sbjct: 4682 QPEKSKP-VLAYNGSSSSFMDV-ELLPFTEYEYQVWAVNSAGKAPSSWTR-CRTGPAPPE 4738
Query: 187 GKFIVWFR--NETTLLV-LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA 243
G F + T +V + P P I T Y++ ++VL EG Q
Sbjct: 4739 GLKAPKFHAVSATQAVVNISTPQKPNGIVTLYRLFSRSTSGAQTVL---AEGLA---TQQ 4792
Query: 244 AFKGLVPGRAYNISVQTVSEDEI-STPTTAQYRTIPLRPLSFTYDKAS-ITSNSLRVVWE 301
L P Y+I V+ + S TA+ RT P P + + + S + W
Sbjct: 4793 TLHSLQPFTTYSIGVEACTCFSCCSQGPTAELRTPPAPPAGLSSPQIQMLASRTASFQWS 4852
Query: 302 PPKGFSE--FDKYQVSINVRRPGASSTPITKSRDE-----PTQCDMSEGLEPGRTYQVLV 354
PP F Y++ + P S+TP T S+ E P Q EGL+P TY++ V
Sbjct: 4853 PPL-FPNGVIQSYELQLYKACPPDSATPCTPSQTETKYRGPGQRASLEGLQPYTTYKLRV 4911
Score = 54 (24.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 34 PAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTW 82
P H PP T SR + + + G + LY +N T HD+ W
Sbjct: 2144 PEHVDPPILTVLDSRTVYIQWKQPRKVNGILERYMLYISNHT-HDFTVW 2191
Score = 39 (18.8 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS 57
S+ S L+ PA HPP T + I N+ +S
Sbjct: 4346 STTTSITTLEAAPAGVHPPALRTISATQI--NVSWS 4379
>ZFIN|ZDB-GENE-030131-9889 [details] [associations]
symbol:col14a1 "collagen, type XIV, alpha 1"
species:7955 "Danio rerio" [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR002035 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092
PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060 SMART:SM00327
ZFIN:ZDB-GENE-030131-9889 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00210
GeneTree:ENSGT00700000104243 EMBL:CR848753 EMBL:CR626888
EMBL:CR848054 EMBL:CU929270 EMBL:FP074876 IPI:IPI00931758
Ensembl:ENSDART00000027982 ArrayExpress:F1R9Y1 Bgee:F1R9Y1
Uniprot:F1R9Y1
Length = 1864
Score = 145 (56.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 64/268 (23%), Positives = 109/268 (40%)
Query: 93 PTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRII-GFTENPPAGYSLKD 151
P NL ++ + + ++ W+ +GK +++ P I+ G EN +L
Sbjct: 358 PLNLLISEVTAHSFRVSWTHS-AGKVEKYRVVYHPTDADIPEEIVVGGLENSVVLQNLNS 416
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASI 211
LT Y++ +F+VY S S A T T ++ ++++ W+ + AS
Sbjct: 417 LT---EYEIAVFAVYRSAASDALRGSEITQALPTVSDLELYDVTDSSMRARWRDAEGASG 473
Query: 212 YT--HYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTP 269
Y + +S D PD E L V++ GL+P Y ++V +E S P
Sbjct: 474 YMILYAPLSSDTPDERE--LKVDET-----VTDVELTGLIPDTEYTVTVYATFGEEASDP 526
Query: 270 TTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT 329
T Q T+ L+P + +S+R+ W+ S+ YQV I V+ G + +
Sbjct: 527 ATVQETTMSLKPPR-NLRVTEVDHSSVRLNWDSAS--SKVKGYQV-IYVKTDGVQTNQVE 582
Query: 330 KSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
P + L P Y V V V
Sbjct: 583 LG---PVTNVYLKNLSPLTEYTVAVFAV 607
Score = 140 (54.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 79/311 (25%), Positives = 126/311 (40%)
Query: 26 STYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT-NSTVHDWLTWTA 84
S Y + Y P P + ++E + +P T+Y +Y T D T
Sbjct: 472 SGYMILYAPLSSDTPDERELKVDETVTDVELTGLIPDTEYTVTVYATFGEEASDPAT-VQ 530
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRI-IGFTENP 143
T PP NL V + ++ W S K G+++ + ++ +G P
Sbjct: 531 ETTMSLKPPRNLRVTEVDHSSVRLNWDSA-SSKVKGYQVIYVKTDGVQTNQVELG----P 585
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETT--LLV 201
LK+L+P Y V +F+VYD +S A S F+TK P F + + T+ V
Sbjct: 586 VTNVYLKNLSPLTEYTVAVFAVYDGGQSEAL-SGGFSTKL-VPAPFSLMTSDVTSESFQV 643
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA-AFKGLVPGRAYNISVQT 260
W S+PA YK+ I P A E+E G + + L P Y +S+
Sbjct: 644 SW--SHPARDVVLYKL-IWSPTAGRD----EREVMLAGDTDSYVIQDLSPFTEYKVSLAA 696
Query: 261 VSEDEI-STPT---------TAQY-RTIPLRPLSFTYDKASI-----TSNSLRVVWEPPK 304
+ +DE S+P T ++ TIP F ++ T S++V WE
Sbjct: 697 IYKDETESSPVVVLEYTLGWTTEFPTTIPTTTPIFHQGVTNLWIDEETPFSIQVNWEVQD 756
Query: 305 GFSEFDKYQVS 315
S+ D+Y+V+
Sbjct: 757 --SDVDQYKVT 765
>MGI|MGI:3045960 [details] [associations]
symbol:Sned1 "sushi, nidogen and EGF-like domains 1"
species:10090 "Mus musculus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR003886 InterPro:IPR003961
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00041 Pfam:PF06119
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220
SMART:SM00060 SMART:SM00179 SMART:SM00181 SMART:SM00539
InterPro:IPR000152 MGI:MGI:3045960 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0007160 PROSITE:PS00010
InterPro:IPR000436 SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923
Pfam:PF12661 HSSP:P01132 GeneTree:ENSGT00700000104308 CTD:25992
eggNOG:NOG242910 HOVERGEN:HBG108495 OrthoDB:EOG4K0QMM EMBL:AY169783
EMBL:AJ584850 EMBL:BC145886 EMBL:AK032805 IPI:IPI00329862
IPI:IPI00857525 RefSeq:NP_766051.4 UniGene:Mm.271897
ProteinModelPortal:Q70E20 SMR:Q70E20 STRING:Q70E20
PhosphoSite:Q70E20 PRIDE:Q70E20 Ensembl:ENSMUST00000062202
GeneID:208777 KEGG:mmu:208777 UCSC:uc007cdm.1 HOGENOM:HOG000081748
InParanoid:Q70E20 NextBio:372415 Bgee:Q70E20 CleanEx:MM_SNED1
Genevestigator:Q70E20 Uniprot:Q70E20
Length = 1403
Score = 143 (55.4 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 73/282 (25%), Positives = 116/282 (41%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYS 148
PPT L V I WSPP G + L V S R F + + +
Sbjct: 908 PPTALRVERVEESGVSISWSPP-EGTTARQVLDGYAVTYASSDGSSRRTDFVDRSRSSHQ 966
Query: 149 LKDLTPGGSYQVQLFSVY---DSKESVAYTSRNFT-TKPNTPGKFIVWFRNETTLLVLWQ 204
L+ L G +Y + +FSV ++K ++ + T T+P F V + + V W
Sbjct: 967 LRALAAGRAYNISVFSVKRNTNNKNDISRPAALLTRTRPRPIEDFEVTNISANAISVQWA 1026
Query: 205 -PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
+ + +VSI P+A +V E + + F L+PGR Y + + T+S
Sbjct: 1027 LHRIQHATVSRVRVSILYPEA-SAVQSTEVDRSVD---RLTFGDLLPGRRYTVRLTTLSG 1082
Query: 264 DEISTPTTAQYRTIPL----RPLSFTYDKAS-ITSNSLRVVWEPPKGFSEFDKYQVSINV 318
+ T + PL RPL AS +T+ S ++W+ P + Y +++
Sbjct: 1083 PGGAEYPTESLASAPLNVWTRPLPPANLTASRVTATSAHMIWDTPAPGISLEAYVINV-- 1140
Query: 319 RRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
+++ TKSR P +S L PGR YQ+ V V
Sbjct: 1141 -----TTSQSTKSRYIPNGKLVSYTVRDLMPGRRYQLSVTAV 1177
Score = 123 (48.4 bits), Expect = 0.00049, P = 0.00049
Identities = 54/200 (27%), Positives = 91/200 (45%)
Query: 172 VAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP---SYPASIYTHYKVSIDPPD-APES 227
V YT ++ T + P V E+ + + W P + + Y V+ D +
Sbjct: 895 VGYTGKDCTKELLPPTALRVERVEESGVSISWSPPEGTTARQVLDGYAVTYASSDGSSRR 954
Query: 228 VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV-----SEDEISTPTTAQYRTIPLRPL 282
+V++ + + L GRAYNISV +V ++++IS P RT P RP+
Sbjct: 955 TDFVDRSR-----SSHQLRALAAGRAYNISVFSVKRNTNNKNDISRPAALLTRTRP-RPI 1008
Query: 283 SFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS---STPITKSRDEPTQCD 339
++ +I++N++ V W + +V +++ P AS ST + +S D T D
Sbjct: 1009 E-DFEVTNISANAISVQWALHR-IQHATVSRVRVSILYPEASAVQSTEVDRSVDRLTFGD 1066
Query: 340 MSEGLEPGRTYQVLVKTVSG 359
L PGR Y V + T+SG
Sbjct: 1067 ----LLPGRRYTVRLTTLSG 1082
>UNIPROTKB|E1B8G8 [details] [associations]
symbol:E1B8G8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR003886 InterPro:IPR003961
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00041 Pfam:PF06119
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220
SMART:SM00060 SMART:SM00179 SMART:SM00181 SMART:SM00539
InterPro:IPR000152 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007160 PROSITE:PS00010 InterPro:IPR000436
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 Pfam:PF12661
GeneTree:ENSGT00700000104308 EMBL:DAAA02009516 EMBL:DAAA02009517
EMBL:DAAA02009518 IPI:IPI00716006 ProteinModelPortal:E1B8G8
Ensembl:ENSBTAT00000018790 Uniprot:E1B8G8
Length = 1324
Score = 142 (55.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 74/285 (25%), Positives = 115/285 (40%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGK----YSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
PPT L V I W PP G+ + +S S+ + R F + + +
Sbjct: 837 PPTALKVEQVEESGVSISWRPPEGPAARQLLDGYAVTYVS-SDGSYRRT-DFVDRGRSAH 894
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLW 203
L+ L PG +Y V +FSV + + SR T+P V + + V W
Sbjct: 895 QLRALAPGRAYNVSVFSVKRNANNKNDISRPVVLLARTRPRPIEGLEVANVTASAISVRW 954
Query: 204 Q-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
+ + ++SI P+A E + + F+ L+PGR Y I V +S
Sbjct: 955 ALHRIRHATVSSVRLSIRHPEAQEE----QSTDVDRSVDRFTFRALLPGRRYAIWVTALS 1010
Query: 263 E---DEISTPTTAQYR----TIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
E T + A T PL P + T A +T+ S VVW+ P + + Y ++
Sbjct: 1011 GLGGQERPTESLASAPVHVWTRPLPPANLT--AARVTATSAHVVWDAPAPGASLEAYVIN 1068
Query: 316 INVRRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
+ +++ TKSR P +S L PGR YQ+ V V
Sbjct: 1069 V-------TTSQSTKSRYVPNGRLVSYTVRDLAPGRRYQLSVTAV 1106
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 55/199 (27%), Positives = 89/199 (44%)
Query: 172 VAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY-PAS--IYTHYKVSIDPPDAPESV 228
V YT R+ + P V E+ + + W+P PA+ + Y V+ D
Sbjct: 824 VGYTGRDCDKELFPPTALKVEQVEESGVSISWRPPEGPAARQLLDGYAVTYVSSDGS--- 880
Query: 229 LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV-----SEDEISTPTTAQYRTIPLRPLS 283
Y + G + + L PGRAYN+SV +V ++++IS P RT P RP+
Sbjct: 881 -YRRTDFVDRGRSAHQLRALAPGRAYNVSVFSVKRNANNKNDISRPVVLLARTRP-RPIE 938
Query: 284 FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS---STPITKSRDEPTQCDM 340
+ A++T++++ V W + V +++R P A ST + +S D T
Sbjct: 939 -GLEVANVTASAISVRWALHR-IRHATVSSVRLSIRHPEAQEEQSTDVDRSVDRFT---- 992
Query: 341 SEGLEPGRTYQVLVKTVSG 359
L PGR Y + V +SG
Sbjct: 993 FRALLPGRRYAIWVTALSG 1011
>UNIPROTKB|G3N3S9 [details] [associations]
symbol:G3N3S9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR003886 InterPro:IPR003961
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00041 Pfam:PF06119
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220
SMART:SM00060 SMART:SM00179 SMART:SM00181 SMART:SM00539
InterPro:IPR000152 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007160 PROSITE:PS00010 InterPro:IPR000436
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 Pfam:PF12661
GeneTree:ENSGT00700000104308 EMBL:DAAA02009516 EMBL:DAAA02009517
EMBL:DAAA02009518 OMA:KSFPVWE Ensembl:ENSBTAT00000064553
Uniprot:G3N3S9
Length = 1334
Score = 142 (55.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 74/285 (25%), Positives = 115/285 (40%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGK----YSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
PPT L V I W PP G+ + +S S+ + R F + + +
Sbjct: 837 PPTALKVEQVEESGVSISWRPPEGPAARQLLDGYAVTYVS-SDGSYRRT-DFVDRGRSAH 894
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLW 203
L+ L PG +Y V +FSV + + SR T+P V + + V W
Sbjct: 895 QLRALAPGRAYNVSVFSVKRNANNKNDISRPVVLLARTRPRPIEGLEVANVTASAISVRW 954
Query: 204 Q-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
+ + ++SI P+A E + + F+ L+PGR Y I V +S
Sbjct: 955 ALHRIRHATVSSVRLSIRHPEAQEE----QSTDVDRSVDRFTFRALLPGRRYAIWVTALS 1010
Query: 263 E---DEISTPTTAQYR----TIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
E T + A T PL P + T A +T+ S VVW+ P + + Y ++
Sbjct: 1011 GLGGQERPTESLASAPVHVWTRPLPPANLT--AARVTATSAHVVWDAPAPGASLEAYVIN 1068
Query: 316 INVRRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
+ +++ TKSR P +S L PGR YQ+ V V
Sbjct: 1069 V-------TTSQSTKSRYVPNGRLVSYTVRDLAPGRRYQLSVTAV 1106
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 55/199 (27%), Positives = 89/199 (44%)
Query: 172 VAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY-PAS--IYTHYKVSIDPPDAPESV 228
V YT R+ + P V E+ + + W+P PA+ + Y V+ D
Sbjct: 824 VGYTGRDCDKELFPPTALKVEQVEESGVSISWRPPEGPAARQLLDGYAVTYVSSDGS--- 880
Query: 229 LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV-----SEDEISTPTTAQYRTIPLRPLS 283
Y + G + + L PGRAYN+SV +V ++++IS P RT P RP+
Sbjct: 881 -YRRTDFVDRGRSAHQLRALAPGRAYNVSVFSVKRNANNKNDISRPVVLLARTRP-RPIE 938
Query: 284 FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGAS---STPITKSRDEPTQCDM 340
+ A++T++++ V W + V +++R P A ST + +S D T
Sbjct: 939 -GLEVANVTASAISVRWALHR-IRHATVSSVRLSIRHPEAQEEQSTDVDRSVDRFT---- 992
Query: 341 SEGLEPGRTYQVLVKTVSG 359
L PGR Y + V +SG
Sbjct: 993 FRALLPGRRYAIWVTALSG 1011
>UNIPROTKB|Q7Z5N4 [details] [associations]
symbol:SDK1 "Protein sidekick-1" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 eggNOG:NOG12793 InterPro:IPR013098
Pfam:PF07679 CTD:221935 HOGENOM:HOG000231052 HOVERGEN:HBG080083
OrthoDB:EOG4CNQQ4 EMBL:AY310398 EMBL:AK055987 EMBL:AC004935
EMBL:AC004984 EMBL:AC011284 EMBL:AC015968 EMBL:AC069286
EMBL:AC073316 EMBL:AC073550 EMBL:AC079231 EMBL:AC092427
EMBL:AK074077 EMBL:AK074083 IPI:IPI00784490 IPI:IPI00942650
IPI:IPI01014396 RefSeq:NP_689957.3 UniGene:Hs.653013
ProteinModelPortal:Q7Z5N4 SMR:Q7Z5N4 IntAct:Q7Z5N4
MINT:MINT-1182578 STRING:Q7Z5N4 PhosphoSite:Q7Z5N4 DMDM:296452965
PaxDb:Q7Z5N4 PeptideAtlas:Q7Z5N4 PRIDE:Q7Z5N4
Ensembl:ENST00000404826 GeneID:221935 KEGG:hsa:221935
UCSC:uc003smx.3 UCSC:uc003smz.3 GeneCards:GC07P003307
H-InvDB:HIX0006441 HGNC:HGNC:19307 HPA:HPA011392 MIM:607216
neXtProt:NX_Q7Z5N4 PharmGKB:PA134957188 KO:K16353 OMA:YQISWEV
ChiTaRS:SDK1 GenomeRNAi:221935 NextBio:91498 ArrayExpress:Q7Z5N4
Bgee:Q7Z5N4 CleanEx:HS_SDK1 Genevestigator:Q7Z5N4
GermOnline:ENSG00000146555 Uniprot:Q7Z5N4
Length = 2213
Score = 143 (55.4 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 84/326 (25%), Positives = 128/326 (39%)
Query: 59 GL-PGTKYDFYLYYTNSTVH-DWLTWTASITTPPDPPTNLSVN-VRSGKTAQ---IFWSP 112
GL P Y F + N + T+ + P +PP+ N V SG+T Q + W P
Sbjct: 732 GLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQP 791
Query: 113 PISGKYSG------FKLKVISLSEKTPPRIIGFTENPPAGYSL-KDLTPGGSYQVQLFSV 165
P +++G + ++ L + R I +P Y L DL Y++Q+ +
Sbjct: 792 PPETEHNGVLRGYILRYRLAGLPGEYQQRNI---TSPEVNYCLVTDLIIWTQYEIQV-AA 847
Query: 166 YD-------SKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP---SYPASIYTHY 215
Y+ S+ YT + T P P N TT+ LW P + I Y
Sbjct: 848 YNGAGLGVFSRAVTEYTLQGVPTAP--PQNVQTEAVNSTTIQFLWNPPPQQFINGINQGY 905
Query: 216 KVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYR 275
K+ P DAPE+V V + G L AY SV + P+T Q
Sbjct: 906 KLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGDGPPSTPQLV 965
Query: 276 -TIPLRPLSFTY-DKASITSNSLRVVW-EPPKGFSEFDKYQVSINVRRPGASSTPITKSR 332
T +P + + I SL+V W EP + YQ+S V G + + +T +
Sbjct: 966 WTQEDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQISWEVY--GRNDSRLTHTL 1023
Query: 333 DEPTQCDMSEGLEPGRTYQVLVKTVS 358
+ T +GL TY + V V+
Sbjct: 1024 NSTTHEYKIQGLSSLTTYTIDVAAVT 1049
>UNIPROTKB|J9NW78 [details] [associations]
symbol:PTPRH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00700000104388 EMBL:AAEX03000734
Ensembl:ENSCAFT00000047240 Uniprot:J9NW78
Length = 881
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 77/314 (24%), Positives = 127/314 (40%)
Query: 20 NLSSD---NSTYRLDYIPAHGHPPPNTTY----VSRDIKDNIEFS---EGL-PGTKYDFY 68
NLS + S+ L +I P N TY + K S +GL PG+ Y+F
Sbjct: 189 NLSVEAQTTSSITLSWIEPADPDPSNYTYWIQWTDNETKSTTSTSVIVDGLQPGSLYEFV 248
Query: 69 LYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL 128
++ + V T + TT P+ T+L ++ + + W+ P+ + V +
Sbjct: 249 VWVEKNGVSSSKK-TCNATTVPNAVTSLGTQDQTNSSITLSWTAPLGPDQPPYTYWVSWV 307
Query: 129 SEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGK 188
E I + P +LK+L G Y F+V+ + V+ SR T + P +
Sbjct: 308 KEGIIA--INTQDTPDTSITLKELEAGSLYT---FTVWAERNGVSSDSRTLT-EATAPNR 361
Query: 189 FIVWFRNET----TLLVLWQ-PS-YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
+ NET ++ + W+ P+ + + YT++ V P P + + E Q
Sbjct: 362 -VTDLHNETQTNSSITLEWKAPTDFHSQTYTYW-VQWAPGGHPHQI---GRTNETRYEVQ 416
Query: 243 AAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVV--W 300
A L PG YN+SV + S + T P P+ T TS V+ W
Sbjct: 417 A----LEPGTLYNLSVWAERNNVTSWAQSLLASTAP-SPV--TIMSCISTSGGYGVILTW 469
Query: 301 EPPKGFSEFDKYQV 314
P+G E ++QV
Sbjct: 470 SCPQGGYEAFEWQV 483
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 70/311 (22%), Positives = 119/311 (38%)
Query: 11 ANLVIKIPENLSSD---NSTYRLDYIPAHGHPPPNTTY----VSRDIKDNIEFS---EGL 60
A+ + NLS + S+ L +I P N TY + K S +GL
Sbjct: 95 ASTALNPVRNLSVEAQTTSSITLSWIEPADPDPSNYTYWIQWTGNETKSTTSTSVIVDGL 154
Query: 61 -PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
PG+ Y+F ++ + V T + TT P+P NLSV ++ + + W P S
Sbjct: 155 QPGSLYEFVVWVEKNGVSS-SNKTCNATTAPNPVRNLSVEAQTTSSITLSWIEPADPDPS 213
Query: 120 GFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSR-- 177
+ + +T + L PG Y+ F V+ K V+ + +
Sbjct: 214 NYTYWIQWTDNETK-------STTSTSVIVDGLQPGSLYE---FVVWVEKNGVSSSKKTC 263
Query: 178 NFTTKPNTPGKFIVWFRNETTLLVLWQ-PSYPASI-YTHYKVSIDPPDAPESVLYVEKEG 235
N TT PN + +++ + W P P YT++ VS E ++ + +
Sbjct: 264 NATTVPNAVTSLGTQDQTNSSITLSWTAPLGPDQPPYTYW-VSW----VKEGIIAINTQD 318
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
P K L G Y +V S T T P R ++ +++ T++S
Sbjct: 319 TPD--TSITLKELEAGSLYTFTVWAERNGVSSDSRTLTEATAPNR-VTDLHNETQ-TNSS 374
Query: 296 LRVVWEPPKGF 306
+ + W+ P F
Sbjct: 375 ITLEWKAPTDF 385
>UNIPROTKB|E1BW51 [details] [associations]
symbol:FNDC3B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0045600 "positive regulation of fat cell differentiation"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005783 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0045600 GeneTree:ENSGT00530000063598
CTD:64778 OMA:YITREDQ EMBL:AADN02021009 EMBL:AADN02021010
IPI:IPI00582006 RefSeq:NP_001239253.1 UniGene:Gga.13389
ProteinModelPortal:E1BW51 Ensembl:ENSGALT00000015009 GeneID:424984
KEGG:gga:424984 NextBio:20827238 Uniprot:E1BW51
Length = 1208
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 87/337 (25%), Positives = 133/337 (39%)
Query: 45 YVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITT----PPDP-PTNLSVN 99
Y +++ N++ + P T Y +Y T ++V + S TT P P P S
Sbjct: 337 YSGEELEYNLK--DLRPATDYHVRVYATYNSVRGSCSEPVSFTTHSSAPECPFPPKPSHR 394
Query: 100 VRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE---NPPAGYSLKDLTPGG 156
+S T Q W PI +G K+ L R GF E L L P
Sbjct: 395 TKSSLTLQ--WKAPID---NGSKITSYLLEWDEGKRNSGFRECYFGSQKHCKLTKLCPAL 449
Query: 157 SYQVQLFSVYD------SKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL-W---QPS 206
Y +L + D S+E V YT+ N P+ P + + R T + L W +
Sbjct: 450 GYTFRLAAQNDIGTSGYSQEVVCYTAGNIPQTPSAP-RLV---RAGVTWVALQWNKVEGC 505
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
P + + Y + I D +SV + + GE K L Y + + +
Sbjct: 506 TPEEVIS-YTLEIQEEDN-DSVFHPKYTGEEQA---CTVKNLRRSTQYKFRLFASNVEGK 560
Query: 267 STPTTAQY-RTIPLRPLSFTYD--KASITSNSLRVVWEPPK--GFSEFDKYQVSINVRRP 321
S+P+ T P RP T K ITS+ V W+PP+ G SE KY + I+ P
Sbjct: 561 SSPSEVLVCTTSPDRPGPPTRPIIKGPITSHGFSVKWDPPQDNGGSEILKYLLEISQGSP 620
Query: 322 GASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
A+ + S T+ + L+PG Y++ +S
Sbjct: 621 EANQWEVAYS-GSATEYTCTH-LKPGTLYKLRACCIS 655
>ZFIN|ZDB-GENE-980526-104 [details] [associations]
symbol:tnc "tenascin C" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=IEP] [GO:0001755 "neural crest cell
migration" evidence=IEP] [GO:0030517 "negative regulation of axon
extension" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0021554
"optic nerve development" evidence=IMP] [GO:0014814 "axon
regeneration at neuromuscular junction" evidence=IMP] [GO:0048680
"positive regulation of axon regeneration" evidence=IMP]
[GO:0045887 "positive regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR000742
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
ZFIN:ZDB-GENE-980526-104 GO:GO:0007411 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007498 GO:GO:0001755
GO:GO:0045887 SUPFAM:SSF49265 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0048680 GO:GO:0007413 Gene3D:3.90.215.10
Gene3D:4.10.530.10 InterPro:IPR014716 InterPro:IPR014715
Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS51406
InterPro:IPR013111 Pfam:PF07974 GO:GO:0030517 Pfam:PF12661
GO:GO:0021554 GeneTree:ENSGT00690000102056 EMBL:FP015972
IPI:IPI00899922 Ensembl:ENSDART00000026107
Ensembl:ENSDART00000131729 GO:GO:0014814 Uniprot:F1QYE2
Length = 1811
Score = 136 (52.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 64/279 (22%), Positives = 113/279 (40%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGK 117
GL PG +Y+ L + + ++ T D P+ + V + TA + W P++ +
Sbjct: 836 GLGPGQEYEVKLEVVKNNTRGPPA-SKNVVTMIDAPSQVDVRDVTDTTALVTWLQPVA-Q 893
Query: 118 YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSR 177
G + ++ + I + + Y L +L+P Y+V L + S
Sbjct: 894 VDGISVSYGPNTDSSDRNTIELS-SIETQYHLAELSPDTEYEVSLMARRGEMSSFPIYE- 951
Query: 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
FTT ++P + + ++ + W+ S A++ +Y+V P E V G
Sbjct: 952 TFTTDLDSPKHLKAIEQTDESITLEWRNSR-ANVL-NYRVKYGPLSGGEHGELVFPSGLQ 1009
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLR 297
QA GL PG Y + V ++ E+ S P T T L P + T +L
Sbjct: 1010 D-TTQAKITGLRPGTEYGMGVTSIKEERESLPATTNAVT-DLDPPK-DLQVSETTETTLA 1066
Query: 298 VVWEPPKGFSEFDKYQV--------SINVRRPGASSTPI 328
+VW P ++ D Y + ++ PGA++T I
Sbjct: 1067 LVWRRP--VAKIDTYSLVFIPADGDKTELKIPGAANTYI 1103
Score = 132 (51.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 61/256 (23%), Positives = 105/256 (41%)
Query: 24 DNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWT 83
DN YR+ Y+P G P T V + S PG Y + + + +
Sbjct: 1348 DN--YRVIYVPIQGGSPL-TLRVDGG-ESQAMLSNLTPGVTYQVTVIAVKG-LEESEPGS 1402
Query: 84 ASITTPPDPPTNLS-VNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+TT D P L+ VN+ S A + W P I+ G+ VI+ S + ++
Sbjct: 1403 ERVTTALDKPRGLTAVNI-SDTEALLLWQPSIA-TVDGY---VITYSADSVAPVMERVSG 1457
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVW-FRNETTLLV 201
+ + LTP Y V++++ D+ +S A TS +FTT + P + ET +L
Sbjct: 1458 NTVEFEMSSLTPATLYTVKVYAFRDTAKSAA-TSTDFTTDVDAPQNLAASNIQTETAMLT 1516
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
W+P P + + Y +S + D V++ P + L Y + +Q +
Sbjct: 1517 -WKP--PRADISGYILSFESADG-----VVKEVVLSPTATFYSMSQLTASTEYTVKLQAI 1568
Query: 262 SEDEISTPTTAQYRTI 277
+ + S + + TI
Sbjct: 1569 AGPKRSRVISTVFLTI 1584
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 66/290 (22%), Positives = 120/290 (41%)
Query: 30 LDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTP 89
+ Y P NT +S I+ +E P T+Y+ L + + + + TT
Sbjct: 899 VSYGPNTDSSDRNTIELS-SIETQYHLAELSPDTEYEVSLMARRGEMSSFPIYE-TFTTD 956
Query: 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRII---GFTENPPAG 146
D P +L ++ ++ + W + + +++K LS ++ G + A
Sbjct: 957 LDSPKHLKAIEQTDESITLEWRNSRANVLN-YRVKYGPLSGGEHGELVFPSGLQDTTQA- 1014
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
+ L PG Y + + S+ + +ES+ T+ N T + P V ETTL ++W+
Sbjct: 1015 -KITGLRPGTEYGMGVTSIKEERESLPATT-NAVTDLDPPKDLQVSETTETTLALVWRRP 1072
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA-AFKGLVPGRAYNISVQTVSEDE 265
A I T+ V I P D ++ L + PG A GL PG + I++ +
Sbjct: 1073 V-AKIDTYSLVFI-PADGDKTELKI------PGAANTYILTGLNPGMLHTITLTAERGRK 1124
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
+S P T T +P + ++ +S + W+ +G E +VS
Sbjct: 1125 MSAPATLSASTDEEKPQVGNITISDVSWDSFSMSWDLDRGEVEGFLIEVS 1174
>ZFIN|ZDB-GENE-070615-38 [details] [associations]
symbol:ptprdb "protein tyrosine phosphatase,
receptor type, D, b" species:7955 "Danio rerio" [GO:0016791
"phosphatase activity" evidence=IEA] [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] [GO:0016311 "dephosphorylation"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 ZFIN:ZDB-GENE-070615-38
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0004725 GO:GO:0035335
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG053758 EMBL:BX546494
EMBL:BX629341 IPI:IPI00852115 RefSeq:NP_001159520.1
UniGene:Dr.111283 UniGene:Dr.160257 ProteinModelPortal:B8A5J5
Ensembl:ENSDART00000131579 GeneID:100073332 KEGG:dre:100073332
CTD:100073332 GeneTree:ENSGT00400000022339 OMA:SINEHES
NextBio:20788617 Bgee:B8A5J5 Uniprot:B8A5J5
Length = 1934
Score = 136 (52.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 67/266 (25%), Positives = 112/266 (42%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPI-SGK--YSGFKLKVISLSEKTPPRIIGFTENP 143
T P PT L V+S + + W PP SG +G++L + L ++ +I T +P
Sbjct: 507 TGVPSQPTELKAEVKSETSILLSWIPPAHSGTDAITGYEL-IYRLGDQPEQKI---TFDP 562
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNT-----PGKFIVWFRNET 197
+ Y LK+L P +Y QL + SK + A+TS P T P + T
Sbjct: 563 SSSYLLKNLKPFSTYVFQLAA--RSKHGLGAFTSEITVQTPQTQSIPPPQDVTCTSPSST 620
Query: 198 TLLVLWQ--PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA-QAAFKGLVPGRAY 254
+LL+ W P+ I T Y + + + V+K + P + +GL G Y
Sbjct: 621 SLLLSWASPPTDENGIVTGYSIRYVAVERDKDP--VQKISDIPSNCFRYRIEGLKKGTLY 678
Query: 255 NISVQTVSED---EISTPTTAQYRT-IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
++++ +++ S P + +P P D + + S RV W+PP +
Sbjct: 679 SVTIAAHTDNGQGPESLPILVRTEEDVPSAPPRGV-DVVVLNATSARVSWKPPVAERQHG 737
Query: 311 K---YQVSINVRRPGASSTPITKSRD 333
K +QV+ RR T + R+
Sbjct: 738 KIRGFQVTY-ARRTAGERTVSPRIRE 762
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 78/350 (22%), Positives = 131/350 (37%)
Query: 26 STYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEG--LPGTKYDFYLYYTNSTVHDWLTWT 83
S Y + Y P+ P + D +S G P + Y F + NS + T
Sbjct: 346 SYYIIQYRPSSSTDP----FKEIDAIATTRYSVGGLSPYSHYHFRVVAVNSIGRGAPSPT 401
Query: 84 ASITT----PPDPPTNLSVNVRSGKTAQIFWSPP--ISGKYSGFKLKVISLSEKTPPRII 137
T P PP + + SG TA + W P +G+ G+++ S S + +
Sbjct: 402 VDARTAEQAPSSPPRRVRGRMLSGSTAMVQWEEPEEANGQVVGYRVYYTSDSSLSVSQWE 461
Query: 138 GFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK---PNTPGKFIVWFR 194
+++DLTP +Y +++ + + + + K P+ P + +
Sbjct: 462 KEMVRGANFLNIRDLTPNKTYYIRVLAFTAVGDGPLSSDLHIIAKTGVPSQPTELKAEVK 521
Query: 195 NETTLLVLW-QPSYPAS-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGR 252
+ET++L+ W P++ + T Y++ D PE + + P + K L P
Sbjct: 522 SETSILLSWIPPAHSGTDAITGYELIYRLGDQPEQKITFD-----PSSSYL-LKNLKPFS 575
Query: 253 AYNISVQTVSEDEIS------TPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGF 306
Y + S+ + T T Q ++IP P T S S SL + W P
Sbjct: 576 TYVFQLAARSKHGLGAFTSEITVQTPQTQSIP-PPQDVTCTSPS--STSLLLSWASPPTD 632
Query: 307 SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS--EGLEPGRTYQVLV 354
SI P+ K D P+ C EGL+ G Y V +
Sbjct: 633 ENGIVTGYSIRYVAVERDKDPVQKISDIPSNCFRYRIEGLKKGTLYSVTI 682
>UNIPROTKB|E1C6Q8 [details] [associations]
symbol:E1C6Q8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00700000104388 OMA:GQIQWYG EMBL:AADN02064001
IPI:IPI00592428 ProteinModelPortal:E1C6Q8
Ensembl:ENSGALT00000000815 Uniprot:E1C6Q8
Length = 1721
Score = 135 (52.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 66/279 (23%), Positives = 115/279 (41%)
Query: 84 ASITTPPDPPTNLSV-NVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
A+ T P P+ +++ N R FW +G F L++ S K+ P +
Sbjct: 303 ATAWTYPLAPSGVTLTNTRRPLGLSAFWDKA-AGDVDQFHLQLYS---KSHPMQRNISVG 358
Query: 143 PPA-GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
P ++ L+PG Y +++ + S ++ + +T + + R L V
Sbjct: 359 PNIHNFTFLGLSPGVQYFLKVSVLAGPYRSSSHFATEWTYPLSLANVSVQPGRRPQELHV 418
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV-QT 260
W S + ++S+ ES+ + P G GLVPG Y + +
Sbjct: 419 SWVESGGGREHL-VQLSV-----AESLSVIRNVSVPRGVTHLDLGGLVPGSRYRVEIISQ 472
Query: 261 VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320
IS+ T Y T+PL PLS + T+ +L V WE P G + D Y +S+ +
Sbjct: 473 AGPHRISSQTAIGY-TVPLPPLSLSASPVG-TAWALAVHWETPPG--QRDGYLLSVLEKG 528
Query: 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ + + +D T +++ L PG Y V + V+G
Sbjct: 529 SSSPARNLELGKDS-TNVTLTQ-LTPGVCYLVGIWAVAG 565
Score = 131 (51.2 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 72/305 (23%), Positives = 121/305 (39%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVN-VRSGKTAQIFWSPPISGKY 118
+PG++Y + + + H + TA T P PP +LS + V + + W P G+
Sbjct: 460 VPGSRYRVEII-SQAGPHRISSQTAIGYTVPLPPLSLSASPVGTAWALAVHWETP-PGQR 517
Query: 119 SGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN 178
G+ L V+ +P R + ++ +L LTPG Y V +++V + S+ RN
Sbjct: 518 DGYLLSVLEKGSSSPARNLELGKDS-TNVTLTQLTPGVCYLVGIWAVAGAFRSLP---RN 573
Query: 179 FT--TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPD-APESVLYVEKEG 235
T T P P + ++ L W + P HY+V + + + V V ++
Sbjct: 574 TTGCTVPAAPTNLSLTNPGSSSELHAWW-NKPVGGRDHYRVVLHSLTLSRDRVQTVSQDA 632
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSED-EISTPTTAQYRTIPLRPLSFTYDKASITSN 294
+ ++ L G + + V V E S+ Q+ T PL P + +
Sbjct: 633 Q-----NISWTHLEAGSRFAVRVIAVKGSLEASSANVTQW-TWPLPPTAVRLLSTG-HPD 685
Query: 295 SLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
L W G D Y +++ G +T T S T GL PG Y + V
Sbjct: 686 RLSASWGAAAG--GHDGYMLTLY--HAGLGTTAATASAGRDTHNVTFTGLAPGYEYSLEV 741
Query: 355 KTVSG 359
+G
Sbjct: 742 SATAG 746
>UNIPROTKB|F1N896 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:AADN02062013 EMBL:AADN02062012
IPI:IPI00812852 Ensembl:ENSGALT00000016338 ArrayExpress:F1N896
Uniprot:F1N896
Length = 1860
Score = 142 (55.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 70/292 (23%), Positives = 118/292 (40%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS----GKYSGFKLKVISLSE---KTPPRIIGFTE 141
P PP + V V + Q+FW P+ G+ G+++ + + + P+I
Sbjct: 662 PSAPPRKVEVEVLNSTAIQVFWRSPVQNRQHGQIRGYQVHYVRMENGEARGLPQIKDIML 721
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS-RNFTTKPNTPGKFI--VWFRNETT 198
+ L P +Y + + + Y K A + + TTK PGK I V E T
Sbjct: 722 ADAQEMVIAGLQPETAYSITV-AAYTMKGDGARSKPKVVTTKGAVPGKPILSVHQTEENT 780
Query: 199 LLVLWQPSYPASIYT-HYKVSIDPPDA-PESVL-YVEKEGEPPGPAQAAFKGLVPGRAYN 255
LLV W+P A Y++ D P + L + E + P+ KG +
Sbjct: 781 LLVKWEPPLDAEGQVIGYRLQFGRKDVDPLATLEFTALEDKYTAPS--IHKGAT--YVFK 836
Query: 256 ISVQT---VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPP---KGFSEF 309
++V++ E+ + TT + IP + + ++ITS S++ W PP +
Sbjct: 837 LAVKSRAGFGEEAVQELTTPE--DIP-KGYPQILEASNITSMSVQFGWLPPVLAERNGAI 893
Query: 310 DKYQVSINVRRPGASSTPITKSRD-EPTQCDMSEGLEPGRTYQVLVKTVSGK 360
KY V+ R G+ P+ K P GL+P Y V ++ + K
Sbjct: 894 VKYTVAY--REAGSPGNPLEKDLPPSPENSYTLNGLKPNTAYDVKIRAHTSK 943
Score = 40 (19.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 341 SEGLEPGRTYQVLVKTVSGKP 361
+ LEPG+ Y + + V +P
Sbjct: 1161 NRALEPGQRYVIFILAVLQEP 1181
>UNIPROTKB|F1N888 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:AADN02062013 EMBL:AADN02062012
IPI:IPI00585421 Ensembl:ENSGALT00000016340 ArrayExpress:F1N888
Uniprot:F1N888
Length = 1897
Score = 142 (55.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 70/292 (23%), Positives = 118/292 (40%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS----GKYSGFKLKVISLSE---KTPPRIIGFTE 141
P PP + V V + Q+FW P+ G+ G+++ + + + P+I
Sbjct: 703 PSAPPRKVEVEVLNSTAIQVFWRSPVQNRQHGQIRGYQVHYVRMENGEARGLPQIKDIML 762
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS-RNFTTKPNTPGKFI--VWFRNETT 198
+ L P +Y + + + Y K A + + TTK PGK I V E T
Sbjct: 763 ADAQEMVIAGLQPETAYSITV-AAYTMKGDGARSKPKVVTTKGAVPGKPILSVHQTEENT 821
Query: 199 LLVLWQPSYPASIYT-HYKVSIDPPDA-PESVL-YVEKEGEPPGPAQAAFKGLVPGRAYN 255
LLV W+P A Y++ D P + L + E + P+ KG +
Sbjct: 822 LLVKWEPPLDAEGQVIGYRLQFGRKDVDPLATLEFTALEDKYTAPS--IHKGAT--YVFK 877
Query: 256 ISVQT---VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPP---KGFSEF 309
++V++ E+ + TT + IP + + ++ITS S++ W PP +
Sbjct: 878 LAVKSRAGFGEEAVQELTTPE--DIP-KGYPQILEASNITSMSVQFGWLPPVLAERNGAI 934
Query: 310 DKYQVSINVRRPGASSTPITKSRD-EPTQCDMSEGLEPGRTYQVLVKTVSGK 360
KY V+ R G+ P+ K P GL+P Y V ++ + K
Sbjct: 935 VKYTVAY--REAGSPGNPLEKDLPPSPENSYTLNGLKPNTAYDVKIRAHTSK 984
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 341 SEGLEPGRTYQVLVKTVSGKP 361
+ LEPG+ Y + + V +P
Sbjct: 1202 NRALEPGQRYVIFILAVLQEP 1222
>UNIPROTKB|F1NWE4 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021766
"hippocampus development" evidence=IEA] [GO:0021987 "cerebral
cortex development" evidence=IEA] [GO:0022038 "corpus callosum
development" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 OMA:TTMIVQW EMBL:AADN02062013
EMBL:AADN02062012 IPI:IPI00591365 Ensembl:ENSGALT00000006442
ArrayExpress:F1NWE4 Uniprot:F1NWE4
Length = 1904
Score = 142 (55.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 70/292 (23%), Positives = 118/292 (40%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS----GKYSGFKLKVISLSE---KTPPRIIGFTE 141
P PP + V V + Q+FW P+ G+ G+++ + + + P+I
Sbjct: 706 PSAPPRKVEVEVLNSTAIQVFWRSPVQNRQHGQIRGYQVHYVRMENGEARGLPQIKDIML 765
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS-RNFTTKPNTPGKFI--VWFRNETT 198
+ L P +Y + + + Y K A + + TTK PGK I V E T
Sbjct: 766 ADAQEMVIAGLQPETAYSITV-AAYTMKGDGARSKPKVVTTKGAVPGKPILSVHQTEENT 824
Query: 199 LLVLWQPSYPASIYT-HYKVSIDPPDA-PESVL-YVEKEGEPPGPAQAAFKGLVPGRAYN 255
LLV W+P A Y++ D P + L + E + P+ KG +
Sbjct: 825 LLVKWEPPLDAEGQVIGYRLQFGRKDVDPLATLEFTALEDKYTAPS--IHKGAT--YVFK 880
Query: 256 ISVQT---VSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPP---KGFSEF 309
++V++ E+ + TT + IP + + ++ITS S++ W PP +
Sbjct: 881 LAVKSRAGFGEEAVQELTTPE--DIP-KGYPQILEASNITSMSVQFGWLPPVLAERNGAI 937
Query: 310 DKYQVSINVRRPGASSTPITKSRD-EPTQCDMSEGLEPGRTYQVLVKTVSGK 360
KY V+ R G+ P+ K P GL+P Y V ++ + K
Sbjct: 938 VKYTVAY--REAGSPGNPLEKDLPPSPENSYTLNGLKPNTAYDVKIRAHTSK 987
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 341 SEGLEPGRTYQVLVKTVSGKP 361
+ LEPG+ Y + + V +P
Sbjct: 1205 NRALEPGQRYVIFILAVLQEP 1225
>UNIPROTKB|Q8AV58 [details] [associations]
symbol:SDK1 "Protein sidekick-1" species:9031 "Gallus
gallus" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0045202 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
EMBL:AF537107 IPI:IPI00596190 RefSeq:NP_989436.1 UniGene:Gga.21885
ProteinModelPortal:Q8AV58 SMR:Q8AV58 PRIDE:Q8AV58 GeneID:373894
KEGG:gga:373894 CTD:221935 HOGENOM:HOG000231052 HOVERGEN:HBG080083
InParanoid:Q8AV58 OrthoDB:EOG4CNQQ4 NextBio:20813426 Uniprot:Q8AV58
Length = 2169
Score = 134 (52.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 86/330 (26%), Positives = 128/330 (38%)
Query: 59 GL-PGTKYDFYLYYTNSTVH-DWLTWTASITTPPDPPTNLSVN-VRSGKTAQ---IFWSP 112
GL P Y F + N + + T+ + P +PP+ N V SG+T Q + W P
Sbjct: 684 GLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQP 743
Query: 113 PISGKYSG------FKLKVISLSEKTPPRIIGFTENPPAGYSL-KDLTPGGSYQVQLFSV 165
P +++G + ++ L + + I E Y L DL Y++Q+ S
Sbjct: 744 PPESEHNGVLHGYILRYRLAGLPGEYQYKNITSAE---INYCLVTDLIIWTQYEIQVAS- 799
Query: 166 YD-------SKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP---SYPASIYTHY 215
Y+ S+ YT + T P P V N TT+ LW P + I Y
Sbjct: 800 YNGAGLGAFSRPVTEYTLQGVPTAP--PQNVQVEAVNSTTIQFLWSPPPQQFINGINQGY 857
Query: 216 KVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV---QTVSEDEISTPTTA 272
K+ P DAP SV V + G L Y SV T + S P
Sbjct: 858 KLLAWPVDAPGSVTVVTIAPDFHGVHSGCITNLKKYTTYYTSVLCFTTPGDGPRSAPQLL 917
Query: 273 QYRTIPLRPLSFTY-DKASITSNSLRVVW-EPPKGFSEFDKYQVSINVRRPGASSTPITK 330
RT+ +P + + I SL+V W EP + YQ+S V G + + +T+
Sbjct: 918 --RTLEDKPGAVGHLSFTEILDTSLKVSWQEPVEKNGIITGYQLSWEVY--GRNESRLTR 973
Query: 331 SRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+ T GL TY + V V+ K
Sbjct: 974 TLTNTTLEYKITGLSSLTTYTIEVAAVTAK 1003
Score = 127 (49.8 bits), Expect = 0.00029, P = 0.00029
Identities = 69/288 (23%), Positives = 109/288 (37%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSP-PIS---GKYSGFKLKVISLSEKTPPRIIGFTEN 142
+ P PP N+S S + WS P S G G+K+ + + PR N
Sbjct: 1226 SVPSAPPENVSAEAVSSTQILLTWSAVPESEQNGLILGYKILYKAKDLDSEPRSQTVRGN 1285
Query: 143 PPAGYSLKDLTPGGSYQVQLFS---VYDS-KESVAYTSRNFTTKPNTPGKFIVWFRNETT 198
L L Y++++ + + D S T R P P + + T+
Sbjct: 1286 HTQSCLLSGLRKYVLYEIRVLAFTRIGDGVPSSPVLTERTKDDAPGPPIRLVFPEVRLTS 1345
Query: 199 LLVLWQP-SYPASIYTHYKVSID-PPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY-- 254
+ ++WQP P I Y+++ +P VE G Q L P AY
Sbjct: 1346 VRIVWQPPEEPNGIILGYQIAYRLASSSPNKFTTVEV-GSTV--RQFTATDLTPESAYIF 1402
Query: 255 NISVQTVS---EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPK-GFSEFD 310
S +T E +T T + R P P T ++ ++S SL++ W P G S
Sbjct: 1403 RTSAKTRQGWGEPLEATVITTEKRERPAPPQQLTTPQSDVSSRSLQLHWVPGSDGSSPIR 1462
Query: 311 KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
+ V + G T + E T C + E L P +Y++ VK +
Sbjct: 1463 YFTVQVRELPNGDWQTYSSSISHEATSC-IIESLNPFTSYKLRVKATN 1509
>UNIPROTKB|I3LFJ4 [details] [associations]
symbol:PTPRH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 GO:GO:0005739
GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0004725 GO:GO:0035335 OMA:FSVWAEK
GeneTree:ENSGT00700000104388 EMBL:FP325226
Ensembl:ENSSSCT00000027366 Uniprot:I3LFJ4
Length = 717
Score = 128 (50.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 79/349 (22%), Positives = 142/349 (40%)
Query: 16 KIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNST 75
++PE TY ++ G + T + + ++E E PGT Y+F ++ +
Sbjct: 24 EVPEGPDPQGYTY---WVQCTGDGGTSETRSTTNTSVSVEGLE--PGTLYEFSVWAEANG 78
Query: 76 VHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR 135
V T + +T P+ T+L V + + + W+ P + + V + E TP
Sbjct: 79 VPG-SNQTLNSSTVPNAVTSLRVEDWTNSSLTLSWTAPQGPPHPPYTYSVSWVEEGTPAS 137
Query: 136 IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRN 195
G T + + +L G Y F+V+ + + +R T P + + +N
Sbjct: 138 --G-TRHTLDTRVVLELEAGSLYT---FTVWAERNGASSDNRTLTGA-TAPSE-VTGLQN 189
Query: 196 ET---TLLVL-WQ-PSYPAS-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
ET T + L W+ P+ P S +Y + V P+ + G+ + + L
Sbjct: 190 ETQTSTSVTLQWEAPADPHSQLYVFW-VQWGE-QGPQG-RQANQTGKT-NETRFEVEALE 245
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWE-PPKGFSE 308
PG YN SV + S+ + + T P P++ T ++ + V W PP G+
Sbjct: 246 PGTLYNFSVWAERNNVASSTRSLRASTAP-DPVTITSCSSASGGYKVVVTWSCPPGGYEA 304
Query: 309 FDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
F+ + V R S P + + MS GL P ++Y +V T+
Sbjct: 305 FE-----LEVGRQRVSQPPSSCGKG----VSMS-GLGPAKSYPAVVTTL 343
>UNIPROTKB|I3LNV5 [details] [associations]
symbol:LOC100624894 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR003961 Pfam:PF00041
Pfam:PF00102 PRINTS:PR00700 PROSITE:PS50055 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00700000104388 OMA:GQIQWYG EMBL:FP565468
Ensembl:ENSSSCT00000026320 Uniprot:I3LNV5
Length = 1343
Score = 131 (51.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 67/262 (25%), Positives = 100/262 (38%)
Query: 52 DNIEFS-EGL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTA-QI 108
DN + GL PG+ Y L+ + + W P PP NLS+ + + A +
Sbjct: 528 DNSSLTLRGLVPGSCYTVSLWTWAGNLSSSIRWPEPALKIPVPPANLSLGLGAQPPALRA 587
Query: 109 FWSPPISGKYSGFKLKVISLSEKTPPRIIGF-TENPPA-GYSLKDLTPGGSYQVQLFSVY 166
WSPP +G + GF L++ L PP + G T P A +S L PG + L ++
Sbjct: 588 SWSPP-AGDWDGFLLRLYRLR---PPALEGEETLAPEAQNFSWDQLAPGTEFLAWLATLR 643
Query: 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE 226
ES + +T P P V T L W + P Y+V++
Sbjct: 644 GPDESSGVNATGWTP-PLAPPLVNVTSEGPTHLRASWVHA-PGG-RDGYQVTLYQAGV-- 698
Query: 227 SVLYVEKEGEPPGPAQ---AAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS 283
+ G P AQ A+F L PG Y + V + + A T P P+
Sbjct: 699 ------RVGSSPVGAQVDGASFSALTPGTKYEVEVVAQAGPLCAAAANASGWTSPHVPVE 752
Query: 284 FTYDKASITSNSLRVVWEPPKG 305
+ S + + W P G
Sbjct: 753 LLVSMQA-HSAVVSLAWASPLG 773
>ZFIN|ZDB-GENE-091118-90 [details] [associations]
symbol:ptprh "protein tyrosine phosphatase, receptor
type, h" species:7955 "Danio rerio" [GO:0016791 "phosphatase
activity" evidence=IEA] [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] [GO:0016311 "dephosphorylation"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 ZFIN:ZDB-GENE-091118-90
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004725
GO:GO:0035335 GeneTree:ENSGT00700000104388 EMBL:CR376854
EMBL:CR925835 IPI:IPI00496333 Ensembl:ENSDART00000114768
Bgee:E7F9R2 Uniprot:E7F9R2
Length = 984
Score = 96 (38.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 51/207 (24%), Positives = 86/207 (41%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF-WS--PPISGK 117
PGT+Y + LY V + +T P + N+SV V + T I W+ P K
Sbjct: 249 PGTEYSYNLYAVFEGVKSQAKGISEVTVPSNVE-NVSV-VEANDTDVILQWNAVPNEQNK 306
Query: 118 YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSR 177
Y+ + LK + E + FT + + L P +Y L + + S+ S Y
Sbjct: 307 YN-YILKYNDVEES-----VDFTTENEIKHHVSGLIPATNYNFTLHTEFYSQNSTGYNF- 359
Query: 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
N TT ++ + V R+ T L V W ++Y + + D + + V G+
Sbjct: 360 NHTTFLSSVTEVRV-NRSLTELTVEWNKLNQNNVYNYTLLRSDGAEIDFTGSAVV--GDV 416
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSED 264
+ + L PG Y+ ++ TVS +
Sbjct: 417 ---IKHKYSSLKPGTVYSFTLFTVSNN 440
Score = 80 (33.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 30/116 (25%), Positives = 51/116 (43%)
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIP--LRPLSFTYDKASITSNSLRVVWEPP 303
+ L PG +Y +S+ E ++ T + + +P + L Y L V+W+ P
Sbjct: 500 RDLYPGESYTVSLFYNLESKMLTQCSQRLTLVPYVVSNLKCEYHSGGY---GLAVMWDYP 556
Query: 304 KGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
G D +V +N + S + DEPTQ + GL+ + Y+V + SG
Sbjct: 557 DGV--VDVVEVDVNKK-----SFNHSHGSDEPTQ-QLVTGLQAAQWYKVKATSFSG 604
>UNIPROTKB|I3LGE9 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022038 "corpus callosum development" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021766
"hippocampus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021510 "spinal cord development"
evidence=IEA] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 GO:GO:0021987 GO:GO:0021766
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0004725 GO:GO:0035335
GO:GO:0021549 GO:GO:0021510 InterPro:IPR013098 Pfam:PF07679
GO:GO:0022038 GeneTree:ENSGT00590000082937 OMA:TTMIVQW
EMBL:FP340368 Ensembl:ENSSSCT00000031816 Uniprot:I3LGE9
Length = 1830
Score = 138 (53.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 77/329 (23%), Positives = 131/329 (39%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEG--LPGTKYDFYLYYTNSTVHDWLTWTAS 85
YR+ Y HP N + ++ D++ + G L Y + S L+
Sbjct: 460 YRIYYTMEPEHPVGN--WQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQ 517
Query: 86 ITTP---PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+ T P P N +S + + WSPP + S K +++ E R +G T +
Sbjct: 518 VKTQQGVPGQPMNFRAEAKSETSIGLSWSPP--RQESIIKYELL-YREGDHGREVGRTFD 574
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTS----RNFTTKPNTPGKFIVWFRNET 197
P + + DL P Y +L + S + + A+TS R +KP+ P + + +
Sbjct: 575 PATAFVVDDLKPNTEYAFRLAA--RSPQGLGAFTSVVRQRTLQSKPSAPPQDVKCVSTRS 632
Query: 198 T-LLVLWQPSYPAS---IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
T +LV W+P P + Y V P + E E G PP Q + L
Sbjct: 633 TAILVSWRPPPPETHNGALVSYSVRYRPLGS-EDPQPKEVNGIPPTTTQILLEALDKWTE 691
Query: 254 YNISVQTVSEDEI-----STPTTAQY-RTIPLRPLSFTYDKASITSNSLRVVWEPP---K 304
Y I+ V+ E+ S+P + +P P + ++ + ++RV+W P +
Sbjct: 692 YRITA--VAHTEVGPGPESSPVVVRTDEDVPSAPPR-KVEAEALNATAIRVLWRSPAPGR 748
Query: 305 GFSEFDKYQVSINVRRPGASSTPITKSRD 333
+ YQV VR GA + + +D
Sbjct: 749 QHGQIRGYQVHY-VRMEGAEARGPPRIKD 776
Score = 41 (19.5 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 341 SEGLEPGRTYQVLVKTVSGK 360
+ GLEPG Y + V V K
Sbjct: 1233 NRGLEPGHRYVLFVLAVLQK 1252
>UNIPROTKB|Q9W6V5 [details] [associations]
symbol:PTPRJ "Receptor-type tyrosine-protein phosphatase
eta" species:9031 "Gallus gallus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0045785 "positive regulation of cell adhesion" evidence=ISS]
[GO:0042059 "negative regulation of epidermal growth factor
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] [GO:0048008 "platelet-derived growth factor
receptor signaling pathway" evidence=ISS] [GO:0051894 "positive
regulation of focal adhesion assembly" evidence=ISS] [GO:0051898
"negative regulation of protein kinase B signaling cascade"
evidence=ISS] [GO:0043407 "negative regulation of MAP kinase
activity" evidence=ISS] [GO:0016791 "phosphatase activity"
evidence=ISS] [GO:0005911 "cell-cell junction" evidence=ISS]
[GO:0050860 "negative regulation of T cell receptor signaling
pathway" evidence=ISS] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0005911 GO:GO:0048008 GO:GO:0016791 GO:GO:0004725
GO:GO:0035335 GO:GO:0032587 GO:GO:0043407 GO:GO:0042059
GO:GO:0050860 GO:GO:0051898 GO:GO:0051894 EMBL:AJ238216
IPI:IPI00584299 RefSeq:NP_989952.1 UniGene:Gga.966 HSSP:Q12913
ProteinModelPortal:Q9W6V5 SMR:Q9W6V5 GeneID:395330 KEGG:gga:395330
CTD:5795 HOVERGEN:HBG053761 KO:K05698 NextBio:20815415
Uniprot:Q9W6V5
Length = 1406
Score = 130 (50.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 76/328 (23%), Positives = 133/328 (40%)
Query: 42 NTTYVSRDIKD--NIEFSEGLPGTKYDFYLYYT---NSTVHDWLTWTASITTPPDPPTNL 96
N T + + + IE + +PGT Y+F ++ T N+T + L+ ++ T P P +
Sbjct: 296 NATSIRNETSNINKIEITGLIPGTSYNFKVFATPVNNTTEEEGLS--LNLYTKPSPVLRV 353
Query: 97 SVNVRSGKTAQIFW--SPPISGKYSGFKLKV---ISLSEKTPPRIIGFTENPPAGYSLKD 151
+ + W S Y+ ++++V S++ KT T+ G
Sbjct: 354 VTEYVGVTSVNLTWMVDDTASDSYT-YRIEVRNGSSINNKTSD----ITDAEITG----- 403
Query: 152 LTPGGSYQVQLFSVY-DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPAS 210
L PG Y +F+V D + + S + TKP+ + T++ + W + AS
Sbjct: 404 LIPGTLYTFTVFAVAADGQTAGEGASISLYTKPSPVLDLKAEYVGVTSVNLTWTVNDTAS 463
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT 270
Y++ + + +S+ A GL+PG YN +V V+ D T
Sbjct: 464 ASYTYRIEVTSDSSIDSLT--------SNVTMAEITGLIPGTLYNFTVFAVAADN-RTEA 514
Query: 271 TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITK 330
+ ++ +P T KA S+ + W S D Y I VR G S K
Sbjct: 515 DGAFTSLYTKPTPVTDLKAEHGVTSVSLNWMVNDTAS--DSYTYRIEVRN-GHSVN--NK 569
Query: 331 SRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
+ + P + +++ GL PG Y V V+
Sbjct: 570 TSNIP-ETEIT-GLNPGTLYTFTVFAVA 595
>UNIPROTKB|H0Y6Z7 [details] [associations]
symbol:PTPRF "Receptor-type tyrosine-protein phosphatase F"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0004725 GO:GO:0035335 EMBL:AL583862 EMBL:AC092815
HGNC:HGNC:9670 ChiTaRS:PTPRF ProteinModelPortal:H0Y6Z7 PRIDE:H0Y6Z7
Ensembl:ENST00000429895 Bgee:H0Y6Z7 Uniprot:H0Y6Z7
Length = 1553
Score = 130 (50.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 79/356 (22%), Positives = 135/356 (37%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEG--LPGTKYDFYLYYTNSTVHDWLTWTAS 85
YR+ Y P PPN + + + + G LPG Y + + + T
Sbjct: 104 YRVYYTP-DSRRPPNAWH-KHNTDAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQ 161
Query: 86 ITTP---PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+ T P P + V S Q+ W P + ++L + ++ + F +
Sbjct: 162 VKTQQGVPAQPADFQAEVESDTRIQLSWLLPPQERIIMYELVYWAAEDEDQQHKVTF--D 219
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESV---AYTSRNFTTKPNTPGKFIVWFR-NETT 198
P + Y+L+DL P Y+ QL + D V +R + P+ P + ++ TT
Sbjct: 220 PTSSYTLEDLKPDTLYRFQLAARSDMGVGVFTPTIEARTAQSTPSAPPQKVMCVSMGSTT 279
Query: 199 LLVLWQPSYPAS----IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254
+ V W P PA + T Y V+ + D + +V +G + GL Y
Sbjct: 280 VRVSWVPP-PADSRNGVITQYSVAYEAVDGEDRGRHVV-DGISREHSSWDLVGLEKWTEY 337
Query: 255 NISVQT---VSEDEISTPTTAQY-RTIPLRPLSFTYDKASITSNSLRVVWE---PPKGFS 307
+ V+ V S+P + +P P + + S ++ V W+ P K
Sbjct: 338 RVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPR-KVEVEPLNSTAVHVYWKLPVPSKQHG 396
Query: 308 EFDKYQVS-INVRRPGASSTPITKS--RDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+ YQV+ + + PI + E + +S GL P TY V V + K
Sbjct: 397 QIRGYQVTYVRLENGEPRGLPIIQDVMLAEAQETTIS-GLTPETTYSVTVAAYTTK 451
>UNIPROTKB|F1NMF3 [details] [associations]
symbol:TNN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0016049
"cell growth" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181 INTERPRO:IPR020837
GO:GO:0007165 GO:GO:0005615 GO:GO:0009986 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0016049 SUPFAM:SSF49265
GO:GO:0005578 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007160
Gene3D:3.90.215.10 Gene3D:4.10.530.10 InterPro:IPR014716
InterPro:IPR014715 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 InterPro:IPR013111 Pfam:PF07974
GeneTree:ENSGT00700000104067 KO:K06252 CTD:63923 OMA:NTKAPTD
EMBL:AADN02034168 EMBL:AADN02034169 EMBL:AADN02034170
IPI:IPI00601377 RefSeq:XP_001233253.1 UniGene:Gga.33729
ProteinModelPortal:F1NMF3 Ensembl:ENSGALT00000007224 GeneID:424435
KEGG:gga:424435 NextBio:20826766 Uniprot:F1NMF3
Length = 1037
Score = 128 (50.1 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 71/340 (20%), Positives = 128/340 (37%)
Query: 23 SDNSTYRLDYIPAHGHPP-PNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLT 81
+D Y + Y P GH +V ++ + + E + P T Y+ LY+ + T
Sbjct: 288 TDVDNYLISYYPV-GHETLEKQVHVPKE-QLSYEITGLRPSTTYNVTLYHVKKGITSEPT 345
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFW-SPPISGKYSGFKLKVISLSEKTPPRIIG-F 139
+ +T P + + V + ++ W +PP Y +KLK SL + +++
Sbjct: 346 HLEA-STVPSALSAIWVTEEMEYSLEVEWENPPTDVDY--YKLKFRSLVDVDEKQVMAPK 402
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
+ +P + + + L PG Y+V + V D E +S + T ++P + E T
Sbjct: 403 SSDPKSRHIMTGLKPGMEYEVTVIPVKDDIEGKP-SSVSGRTGIDSPTNVVTGRVTEDTA 461
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
V W A I Y V D V E + L PG Y I +
Sbjct: 462 TVSWN-KVQAPI-DRYMVRYTSADGDTKETEVGSEN-----SIITLLNLKPGMEYTIHIW 514
Query: 260 TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
S + + T P D+ +T +++ + W+ + + D+Y V+
Sbjct: 515 AEKGPHRSKKASTRALTEIDSPTHLVTDQ--VTEDTVTISWD--RVLALIDRYMVNYTSA 570
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ K++ T GL+PG Y + + G
Sbjct: 571 NGDTEEIEVAKNKTATTLV----GLKPGTEYVIYLWAEKG 606
>UNIPROTKB|F1PJ59 [details] [associations]
symbol:SNED1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR003886 InterPro:IPR003961
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00041 Pfam:PF06119
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220
SMART:SM00060 SMART:SM00179 SMART:SM00181 SMART:SM00539
InterPro:IPR000152 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007160 PROSITE:PS00010 InterPro:IPR000436
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 Pfam:PF12661
GeneTree:ENSGT00700000104308 EMBL:AAEX03014559
Ensembl:ENSCAFT00000020346 Uniprot:F1PJ59
Length = 1408
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 71/282 (25%), Positives = 109/282 (38%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYS 148
PPT L V I W PP G+ + L V S R F + + +
Sbjct: 898 PPTALKVERVEESGVSISWRPP-EGQAARQMLDGYAVTYTSSDGAYRRTDFVDRSRSSHQ 956
Query: 149 LKDLTPGGSYQVQLFSVY---DSKESVAYTSRNFT-TKPNTPGKFIVWFRNETTLLVLWQ 204
L+ L G +Y + +FSV ++K ++ T T+P V + + V W
Sbjct: 957 LRALAAGRAYNISVFSVKRNANNKNDISRPVLLLTRTRPRPVEGLEVTNVTASAISVRWA 1016
Query: 205 -PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
+ + ++SI P+A E + + F L+PGR Y I +S
Sbjct: 1017 LHRIRHATVSSVRLSIRHPEAQED----QSTDLDKSVDKFTFGALLPGRRYAIRAIALSG 1072
Query: 264 DEISTPTTAQYRTIPL----RPLS-FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINV 318
P T + PL RPL A +T+ S VVW+ P + + Y +++
Sbjct: 1073 LGGHEPPTESLASAPLHVWTRPLPPANLTAARVTATSAHVVWDTPTPNTLLEAYVINV-- 1130
Query: 319 RRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
+++ TKSR P S L PGR YQ+ V V
Sbjct: 1131 -----TTSQSTKSRYVPNGRLTSYTVRDLMPGRRYQLSVTAV 1167
>UNIPROTKB|F1SI04 [details] [associations]
symbol:SNED1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR003886 InterPro:IPR003961
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00041 Pfam:PF06119
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220
SMART:SM00060 SMART:SM00179 SMART:SM00181 SMART:SM00539
InterPro:IPR000152 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007160 PROSITE:PS00010 InterPro:IPR000436
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 Pfam:PF12661
GeneTree:ENSGT00700000104308 CTD:25992 OMA:KSFPVWE EMBL:FP102549
RefSeq:XP_003133861.2 Ensembl:ENSSSCT00000017836 GeneID:100512566
KEGG:ssc:100512566 Uniprot:F1SI04
Length = 1414
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 72/284 (25%), Positives = 111/284 (39%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGK----YSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
PPT L V I W PP S G+ + S S+ + R + + +
Sbjct: 908 PPTALKVERVEESGLSISWRPPDSQAARQMLDGYAVTYAS-SDGSYRRT-DVVDRSRSSH 965
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLW 203
L+ L G +Y + +FSV + + SR T+P V + V W
Sbjct: 966 QLRALAAGKAYNISVFSVKRNANNKNDISRPAVLLARTRPRPVEGLEVTNVTANAISVQW 1025
Query: 204 Q-PSYPASIYTHYKVSIDPPDAPESVLY-VEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
+ + +VSI P+A E V++ + + F L+PGR Y I +
Sbjct: 1026 SLHRIRHATVSSVRVSIRHPEAQEEQSTDVDRSAD-----KFTFGALLPGRRYAIWATAL 1080
Query: 262 SEDEISTPTTAQYRTIPL----RPLS-FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSI 316
+ + T + PL RPL A +T+ S VVW+ P + + Y V++
Sbjct: 1081 TGLGVQERPTESLASAPLHVWTRPLPPANLTAARVTATSAHVVWDAPAPGASLEAYVVNV 1140
Query: 317 NVRRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
+S+ TKSR P +S L PGR YQ+ V V
Sbjct: 1141 -------TSSQSTKSRSVPNGRLVSYTVRDLLPGRRYQLSVTAV 1177
>UNIPROTKB|F1PJ58 [details] [associations]
symbol:SNED1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR003886 InterPro:IPR003961
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00041 Pfam:PF06119
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220
SMART:SM00060 SMART:SM00179 SMART:SM00181 SMART:SM00539
InterPro:IPR000152 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007160 PROSITE:PS00010 InterPro:IPR000436
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 Pfam:PF12661
GeneTree:ENSGT00700000104308 EMBL:AAEX03014559
Ensembl:ENSCAFT00000020351 OMA:KSFPVWE Uniprot:F1PJ58
Length = 1419
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 71/282 (25%), Positives = 109/282 (38%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYS 148
PPT L V I W PP G+ + L V S R F + + +
Sbjct: 909 PPTALKVERVEESGVSISWRPP-EGQAARQMLDGYAVTYTSSDGAYRRTDFVDRSRSSHQ 967
Query: 149 LKDLTPGGSYQVQLFSVY---DSKESVAYTSRNFT-TKPNTPGKFIVWFRNETTLLVLWQ 204
L+ L G +Y + +FSV ++K ++ T T+P V + + V W
Sbjct: 968 LRALAAGRAYNISVFSVKRNANNKNDISRPVLLLTRTRPRPVEGLEVTNVTASAISVRWA 1027
Query: 205 -PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263
+ + ++SI P+A E + + F L+PGR Y I +S
Sbjct: 1028 LHRIRHATVSSVRLSIRHPEAQED----QSTDLDKSVDKFTFGALLPGRRYAIRAIALSG 1083
Query: 264 DEISTPTTAQYRTIPL----RPLS-FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINV 318
P T + PL RPL A +T+ S VVW+ P + + Y +++
Sbjct: 1084 LGGHEPPTESLASAPLHVWTRPLPPANLTAARVTATSAHVVWDTPTPNTLLEAYVINV-- 1141
Query: 319 RRPGASSTPITKSRDEPTQCDMS---EGLEPGRTYQVLVKTV 357
+++ TKSR P S L PGR YQ+ V V
Sbjct: 1142 -----TTSQSTKSRYVPNGRLTSYTVRDLMPGRRYQLSVTAV 1178
>UNIPROTKB|F1PH17 [details] [associations]
symbol:PTPRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 OMA:GYYIVIV EMBL:AAEX03007837
Ensembl:ENSCAFT00000002280 Uniprot:F1PH17
Length = 1890
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 75/296 (25%), Positives = 111/296 (37%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T P P N S + + W+PP S + ++L R+ T P
Sbjct: 500 TGVPGQPLNFKAEPESETSILLSWTPPRSDTIASYELVYKDGEHGEEQRV---TIEPGTS 556
Query: 147 YSLKDLTPGGSYQVQLF--SVYDSKESVAYTS-RNFTTKPNTPGKFIVWFR-NETTLLVL 202
Y L+ L P Y +L S S A S R +KP+ P + I + T++LV
Sbjct: 557 YRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVS 616
Query: 203 WQPSYPAS----IYTHYKV---SID-PPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254
WQP P I T Y + S+D D P +L G P + + L Y
Sbjct: 617 WQPP-PVEKQNGIITEYSIKYTSVDGEDDKPHEIL-----GIPSDTTKYLLEQLEKWTEY 670
Query: 255 NISVQTVSEDEISTPTTAQY--RT---IPLRPLSFTYDKASITSNSLRVVWEPP---KGF 306
I+V T D P + RT +P P + ++ S S++V W P K
Sbjct: 671 RITV-TAHTDVGPGPESFSVLIRTDEDVPSGPPR-KVEVEAVNSTSVKVSWRSPVPNKQH 728
Query: 307 SEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
+ YQV + + P+ K DM GL+P +Y + V + K
Sbjct: 729 GQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQDMIISGLQPETSYSLTVTAYTTK 784
>UNIPROTKB|G3XAD5 [details] [associations]
symbol:PTPRD "Receptor-type tyrosine-protein phosphatase
delta" species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
EMBL:CH471071 GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098
Pfam:PF07679 EMBL:AL137125 EMBL:AL356584 EMBL:AL445926
EMBL:AL583805 EMBL:AL590397 UniGene:Hs.446083 HGNC:HGNC:9668
ChiTaRS:PTPRD EMBL:AL133479 EMBL:AL135790 EMBL:AL137069
EMBL:AL137851 EMBL:AL157826 EMBL:AL353638 EMBL:AL353733
EMBL:AL354722 EMBL:AL356054 EMBL:AL390723 EMBL:AL391864
EMBL:AL441884 EMBL:AL451130 EMBL:AL513422 EMBL:AL590307
EMBL:AL591133 EMBL:AL591622 EMBL:AL596451 EMBL:AL669908
ProteinModelPortal:G3XAD5 SMR:G3XAD5 PRIDE:G3XAD5
Ensembl:ENST00000358503 ArrayExpress:G3XAD5 Bgee:G3XAD5
Uniprot:G3XAD5
Length = 1890
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 73/292 (25%), Positives = 108/292 (36%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T P P N S + + W+PP S + ++L RI T P
Sbjct: 500 TGVPGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRI---TIEPGTS 556
Query: 147 YSLKDLTPGGSYQVQLF--SVYDSKESVAYTS-RNFTTKPNTPGKFIVWFR-NETTLLVL 202
Y L+ L P Y +L S S A S R +KP+ P + I + T++LV
Sbjct: 557 YRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVS 616
Query: 203 WQPSYPAS----IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
WQP P I T Y + D + + E G P + + L Y I+V
Sbjct: 617 WQPP-PVEKQNGIITEYSIKYTAVDGEDDKPH-EILGIPSDTTKYLLEQLEKWTEYRITV 674
Query: 259 QTVSEDEISTPTTAQY--RT---IPLRPLSFTYDKASITSNSLRVVWEPP---KGFSEFD 310
T D P + RT +P P + ++ S S++V W P K +
Sbjct: 675 -TAHTDVGPGPESLSVLIRTNEDVPSGPPR-KVEVEAVNSTSVKVSWRSPVPNKQHGQIR 732
Query: 311 KYQVS-INVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
YQV + + P+ K DM GL+P +Y + V + K
Sbjct: 733 GYQVHYVRMENGEPKGQPMLKDVMLADAQDMIISGLQPETSYSLTVTAYTTK 784
>MGI|MGI:2444413 [details] [associations]
symbol:Sdk1 "sidekick homolog 1 (chicken)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:2444413 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101869 CTD:221935 HOGENOM:HOG000231052
HOVERGEN:HBG080083 OrthoDB:EOG4CNQQ4 OMA:YQISWEV EMBL:AY353236
EMBL:AK032883 EMBL:AK035225 EMBL:AK147578 EMBL:AK148648
EMBL:BC060237 IPI:IPI00420682 IPI:IPI00466076 RefSeq:NP_808547.3
UniGene:Mm.151931 UniGene:Mm.406697 ProteinModelPortal:Q3UH53
SMR:Q3UH53 STRING:Q3UH53 PhosphoSite:Q3UH53 PaxDb:Q3UH53
PRIDE:Q3UH53 Ensembl:ENSMUST00000074546 Ensembl:ENSMUST00000085774
GeneID:330222 KEGG:mmu:330222 UCSC:uc009ail.2 UCSC:uc009ain.2
InParanoid:Q3UH53 NextBio:399244 Bgee:Q3UH53 CleanEx:MM_SDK1
Genevestigator:Q3UH53 GermOnline:ENSMUSG00000039683 Uniprot:Q3UH53
Length = 2193
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 82/326 (25%), Positives = 128/326 (39%)
Query: 59 GL-PGTKYDFYLYYTNSTVH-DWLTWTASITTPPDPPTNLSVN-VRSGKTAQ---IFWSP 112
GL P Y F + N + T T+ + P +PP+ N V SG+T Q + W P
Sbjct: 714 GLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQP 773
Query: 113 PISGKYSG------FKLKVISLSEKTPPRIIGFTENPPAGYSL-KDLTPGGSYQVQLFSV 165
P +++G + ++ L + R I +P Y L DL Y++Q+ +
Sbjct: 774 PPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDLIIWTQYEIQV-AA 829
Query: 166 YD-------SKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP---SYPASIYTHY 215
Y+ S+ YT + T P P N TT+ LW P + I Y
Sbjct: 830 YNGAGLGVFSRAVTEYTLQGVPTAP--PQNVQAEAVNSTTVHFLWNPPPQQFINGINQGY 887
Query: 216 KVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYR 275
K+ P DAPE+V V + G L AY SV + P++ Q
Sbjct: 888 KLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTTPGDGPPSSPQLV 947
Query: 276 -TIPLRPLSFTY-DKASITSNSLRVVW-EPPKGFSEFDKYQVSINVRRPGASSTPITKSR 332
T +P + + I SL+V W EP + YQ+S V G + + +T +
Sbjct: 948 WTHEDKPGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQISWEVY--GRNDSRLTHTL 1005
Query: 333 DEPTQCDMSEGLEPGRTYQVLVKTVS 358
+ +GL TY + V ++
Sbjct: 1006 NSTMHEYKIQGLSSLTTYTIDVAALT 1031
>UNIPROTKB|E1BIU8 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022038 "corpus callosum development" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021766
"hippocampus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021510 "spinal cord development"
evidence=IEA] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 GO:GO:0021987 GO:GO:0021766
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0004725 GO:GO:0035335
GO:GO:0021549 GO:GO:0021510 InterPro:IPR013098 Pfam:PF07679
GO:GO:0022038 GeneTree:ENSGT00590000082937 OMA:TTMIVQW
EMBL:DAAA02019588 IPI:IPI00717208 ProteinModelPortal:E1BIU8
Ensembl:ENSBTAT00000044949 Uniprot:E1BIU8
Length = 1911
Score = 136 (52.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 82/359 (22%), Positives = 140/359 (38%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEG--LPGTKYDFYLYYTNSTVHDWLTWTAS 85
YR+ Y HP N + ++ D++ + G L Y + S L+
Sbjct: 447 YRIYYTMEPEHPVGN--WQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQ 504
Query: 86 ITTP---PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+ T P P N +S + + WSPP + S K +++ E R + T +
Sbjct: 505 VKTQQGVPGQPMNFRAEAKSETSIGLSWSPP--RQESIIKYELL-YREGDHGREVARTFD 561
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESV-AYTS----RNFTTKPNTPGKFIVWFRNET 197
P + + DL P Y +L + S + + A+TS R +KP+ P + + +
Sbjct: 562 PATAFVVDDLKPNTEYAFRLAA--RSPQGLGAFTSVVRQRTLQSKPSAPPQDVKCVSTRS 619
Query: 198 T-LLVLWQPSYPAS---IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
T +LV W+P P + Y V P + E E G PP Q + L
Sbjct: 620 TAILVSWRPPPPDTHNGALVSYSVRYRPLGS-EDPQPKEVNGIPPTTTQILLEALDKWTE 678
Query: 254 YNISVQTVSEDEI-----STPTTAQY-RTIPLRPLSFTYDKASITSNSLRVVWEPP---K 304
Y I+ V+ E+ S+P + +P P + ++ + ++RV+W P +
Sbjct: 679 YRITA--VAHTEVGPGPESSPVVVRTDEDVPSAPPR-KVEAEALNATAIRVLWRSPAPGR 735
Query: 305 GFSEFDKYQVSINVRRPGASSTPITKSRD---EPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+ YQV VR GA + + +D Q + L+P Y + V + K
Sbjct: 736 QHGQIRGYQVHY-VRMEGAEARGPPRIKDIMLADAQEMVITNLQPETAYSITVAAYTMK 793
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 341 SEGLEPGRTYQVLVKTVSGK 360
+ GLEPG Y + V V K
Sbjct: 1211 NRGLEPGHRYVLFVLAVLQK 1230
>UNIPROTKB|F1MJR2 [details] [associations]
symbol:PTPRD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 OMA:GYYIVIV EMBL:DAAA02022619
IPI:IPI00722623 Ensembl:ENSBTAT00000013433 Uniprot:F1MJR2
Length = 1776
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 73/292 (25%), Positives = 108/292 (36%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T P P N S + + W+PP S + ++L RI T P
Sbjct: 385 TGVPGQPLNFKAEPESETSILLSWTPPRSDTIASYELVYKDGEHGEEQRI---TIEPGTS 441
Query: 147 YSLKDLTPGGSYQVQLF--SVYDSKESVAYTS-RNFTTKPNTPGKFIVWFR-NETTLLVL 202
Y L+ L P Y +L S S A S R +KP+ P + I + T++LV
Sbjct: 442 YRLQGLRPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVS 501
Query: 203 WQPSYPAS----IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
WQP P I T Y + D + + E G P + + L Y I+V
Sbjct: 502 WQPP-PVDKQNGIITEYSIKYTAVDGEDDKPH-EILGIPSDTTKYLLEQLEKWTEYRITV 559
Query: 259 QTVSEDEISTPTTAQY--RT---IPLRPLSFTYDKASITSNSLRVVWEPP---KGFSEFD 310
T D P + RT +P P + ++ S S++V W P K +
Sbjct: 560 -TAHTDVGPGPESLSVLIRTDEDVPSGPPR-KVEVEAVNSTSVKVSWRSPVPNKQHGQIR 617
Query: 311 KYQVS-INVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
YQV + + P+ K DM GL+P +Y + V + K
Sbjct: 618 GYQVHYVRMENGEPRGQPMLKDVMLADAQDMIISGLQPETSYSLTVTAYTTK 669
>UNIPROTKB|P22105 [details] [associations]
symbol:TNXB "Tenascin-X" species:9606 "Homo sapiens"
[GO:0005518 "collagen binding" evidence=IEA] [GO:0006631 "fatty
acid metabolic process" evidence=IEA] [GO:0006641 "triglyceride
metabolic process" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0043206 "extracellular fibril organization" evidence=IEA]
[GO:0043506 "regulation of JUN kinase activity" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=NAS]
[GO:0048251 "elastic fiber assembly" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0005583 "fibrillar collagen"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=ISS] [GO:0008201
"heparin binding" evidence=ISS] [GO:0032963 "collagen metabolic
process" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=ISS] [GO:0005178 "integrin binding"
evidence=ISS] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS;IDA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026
PROSITE:PS50853 SMART:SM00060 SMART:SM00181 INTERPRO:IPR002181
INTERPRO:IPR020837 GO:GO:0007165 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471081 GO:GO:0030036 SUPFAM:SSF49265
GO:GO:0005578 GO:GO:0030199 GO:GO:0008201 GO:GO:0007155
GO:GO:0006631 GO:GO:0005622 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0006641 GO:GO:0005178 GO:GO:0016337 PROSITE:PS01186
GO:GO:0007160 Gene3D:3.90.215.10 Gene3D:4.10.530.10
InterPro:IPR014716 InterPro:IPR014715 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 EMBL:U89337
EMBL:AL049547 EMBL:AL662828 EMBL:AL662884 EMBL:U52696
GermOnline:ENSG00000168477 GO:GO:0048251 GO:GO:0043206
GO:GO:0043506 Pfam:PF12661 EMBL:AF019413 EMBL:AL662849
EMBL:AL645922 MIM:130020 Orphanet:285 GO:GO:0032963 KO:K06252
MIM:600985 EMBL:U24488 EMBL:AL772248 EMBL:BC033740 EMBL:BC125114
EMBL:BC125115 EMBL:BC130037 EMBL:X71923 EMBL:Y13782 EMBL:Y13783
EMBL:AB209012 EMBL:M25813 IPI:IPI00025276 IPI:IPI00218639
IPI:IPI00895929 PIR:A40701 PIR:A42175 PIR:B42175 PIR:D42175
RefSeq:NP_061978.6 RefSeq:NP_115859.2 UniGene:Hs.485104 PDB:2CUH
PDB:2CUI PDB:2CUM PDBsum:2CUH PDBsum:2CUI PDBsum:2CUM
ProteinModelPortal:P22105 SMR:P22105 IntAct:P22105
PhosphoSite:P22105 DMDM:290457668 PRIDE:P22105 DNASU:7148
Ensembl:ENST00000375247 Ensembl:ENST00000451343
Ensembl:ENST00000546684 Ensembl:ENST00000550539 GeneID:7148
KEGG:hsa:7148 UCSC:uc003nzg.1 UCSC:uc003nzl.2 CTD:7148
GeneCards:GC06M032008 H-InvDB:HIX0165968 H-InvDB:HIX0207682
HGNC:HGNC:11976 HPA:CAB005373 MIM:606408 neXtProt:NX_P22105
Orphanet:230839 PharmGKB:PA36662 HOVERGEN:HBG006855
InParanoid:P22105 ChiTaRS:TNXB EvolutionaryTrace:P22105
GenomeRNAi:7148 NextBio:27974 Bgee:P22105 Genevestigator:P22105
Uniprot:P22105
Length = 4289
Score = 141 (54.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 65/239 (27%), Positives = 101/239 (42%)
Query: 94 TNLSVNVRSGKTAQIFWSPPISGKYSGFKLK--VISLSEKTP-PRIIGFTEN--PPAGYS 148
+ LSV + + ++ W P G + F L+ V S S P PR + E P +S
Sbjct: 3704 SQLSVTDVTTSSLRLNWEAP-PGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHS 3762
Query: 149 --LKDLTPGGSYQVQLFSVYD--SKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
L+DL G Y + L+ + +S+ T+R + +P ET+ V W
Sbjct: 3763 AVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSPVLESPRDLQFSEIRETSAKVNWM 3822
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264
P P S +KVS D E V+ +G+ +GL+PG Y ++V +V
Sbjct: 3823 P--PPSRADSFKVSYQLADGGEPQS-VQVDGQA---RTQKLQGLIPGARYEVTVVSVRGF 3876
Query: 265 EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGA 323
E S P T T+P P ++T + W+PP+ + D Y V + PGA
Sbjct: 3877 EESEPLTGFLTTVPDGPTQLR--ALNLTEGFAVLHWKPPQ--NPVDTYDVQVTA--PGA 3929
Score = 117 (46.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 63/237 (26%), Positives = 103/237 (43%)
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAY----TSRNFTT----------KPNTPGKFIVWF 193
SL DL PG +Y V++ V + S +Y T+ TT +P G+ V
Sbjct: 998 SLPDLRPGTTYHVEVHGVRAGQTSKSYAFITTTGPSTTQGAQAPLLQQRPQELGELRVLG 1057
Query: 194 RNET-TLLVLWQPSYPASIYTHYKVSI-DPPDAPESVLYVE-KEG----EPPG-PAQAAF 245
R+ET L V+W Y ++ + + P A E VL + ++ PPG P + +
Sbjct: 1058 RDETGRLRVVWTAQPDTFAYFQLRMRVPEGPGAHEEVLPGDVRQALVPPPPPGTPYELSL 1117
Query: 246 KGLVPGRAYN--ISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPP 303
G+ PG + I Q + + + P + L L+ T D+ TS+SL + W P
Sbjct: 1118 HGVPPGGKPSDPIIYQGIMDKDEEKPGKSSGPP-RLGELTVT-DR---TSDSLLLRWTVP 1172
Query: 304 KGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+G EFD + + R P+ + P + + L+PGR Y+ ++ GK
Sbjct: 1173 EG--EFDSFVIQYKDRDGQPQVVPV----EGPQRSAVITSLDPGRKYKFVLYGFVGK 1223
Score = 66 (28.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 32/106 (30%), Positives = 45/106 (42%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDW-LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
GL PG +Y + T W L + +ITT D P +L V + T ++ W P
Sbjct: 761 GLAPGQEYQVTVRALRGT--SWGLPASKTITTMIDGPQDLRVVAVTPTTLELGWLRP-QA 817
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPA--GYSLKDLTPGGSYQV 160
+ F + +S + R+ E PP G L DL PG Y V
Sbjct: 818 EVDRFVVSYVSAGNQRV-RL----EVPPEADGTLLTDLMPGVEYVV 858
Score = 39 (18.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 59 GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPD 91
GL PG KY +LY + +T P D
Sbjct: 3054 GLEPGCKYKMHLYGLHEGQRVGPVSAVGVTAPKD 3087
>RGD|621057 [details] [associations]
symbol:Tnc "tenascin C" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISO] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005614 "interstitial matrix" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007528
"neuromuscular junction development" evidence=ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0009611 "response to wounding" evidence=ISO] [GO:0009612
"response to mechanical stimulus" evidence=IEP] [GO:0010628
"positive regulation of gene expression" evidence=ISO] [GO:0014012
"peripheral nervous system axon regeneration" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IMP]
[GO:0042060 "wound healing" evidence=IEP] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEP]
[GO:0045471 "response to ethanol" evidence=IEP] [GO:0045545
"syndecan binding" evidence=ISO] [GO:0060447 "bud outgrowth
involved in lung branching" evidence=IMP] [GO:0060739
"mesenchymal-epithelial cell signaling involved in prostate gland
development" evidence=ISO] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] [GO:0071305 "cellular response to
vitamin D" evidence=IEP] [GO:0071774 "response to fibroblast growth
factor stimulus" evidence=IEP] [GO:0071799 "cellular response to
prostaglandin D stimulus" evidence=IEP] [GO:0031012 "extracellular
matrix" evidence=ISO] InterPro:IPR003961 Pfam:PF00041
PROSITE:PS50853 SMART:SM00060 RGD:621057 INTERPRO:IPR002181
GO:GO:0007165 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009612
GO:GO:0045471 SUPFAM:SSF49265 GO:GO:0071300 GO:GO:0005578
GO:GO:0007162 GO:GO:0042475 GO:GO:0042060 GO:GO:0031175
Gene3D:3.90.215.10 InterPro:IPR014716 Pfam:PF00147 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 GO:GO:0071305 GO:GO:0060447
GO:GO:0071799 GO:GO:0071774 HSSP:Q9U8W8 EMBL:U15550 IPI:IPI00207123
UniGene:Rn.12723 ProteinModelPortal:Q62701 Genevestigator:Q62701
Uniprot:Q62701
Length = 619
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 54/237 (22%), Positives = 91/237 (38%)
Query: 27 TYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86
++R+ Y+P G PP T D + + PG +Y + + + S+
Sbjct: 305 SFRITYVPVTGGPPSMVTVDGTDTETRLV--RLTPGVEYHVSVIAMKG-FEESDPVSGSL 361
Query: 87 TTPPDPPTNL-SVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T D P+ L + N+ + A W P I+ S VIS + + P I
Sbjct: 362 ITALDGPSGLLTANITDSE-ALAMWQPAIATVDS----YVISYTGERVPEITRTVSGNTV 416
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
L DL P Y + +F+ ++S + T+ FTT ++P + T + W+P
Sbjct: 417 ELELHDLEPATEYTLSVFAEKGHQKS-STTATKFTTDLDSPRELTATEVQSETAFLTWRP 475
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
P + T Y + + D + V G P + L P Y +Q +S
Sbjct: 476 --PRASVTGYLLVYESVDGTVKEVIV---G--PDTTSYSLADLSPSTHYTARIQALS 525
>ZFIN|ZDB-GENE-020107-3 [details] [associations]
symbol:ptprsa "protein tyrosine phosphatase, receptor
type, s, a" species:7955 "Danio rerio" [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0016791 "phosphatase
activity" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 SMART:SM00194
ZFIN:ZDB-GENE-020107-3 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:CU137651 EMBL:CU539053
EMBL:CU539058 EMBL:CU539059 EMBL:CU652528 EMBL:FP565454
IPI:IPI00806742 Ensembl:ENSDART00000083308 ArrayExpress:F1QJW2
Bgee:F1QJW2 Uniprot:F1QJW2
Length = 1902
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 63/288 (21%), Positives = 112/288 (38%)
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN-P 143
++ + P PP V + + I W SG +I K+P ++
Sbjct: 312 TVKSLPKPPGTPVVTETTATSITITWD---SGNPEPVSHYIIQYRAKSPESKFETVDSIT 368
Query: 144 PAGYSLKDLTPGGSYQVQL--FS-VYDSKESVAYTSRNFTTKPNTPGKFI-VWFRNETTL 199
YS+ L+P Y++++ F+ + S +R P +P + I ++ T+
Sbjct: 369 TTRYSIGGLSPNTDYEIRVSAFNTIGQGPPSEPVEARTGEQAPASPPRNIQARIISQNTV 428
Query: 200 LVLW-QPSYPASIYTHYKV--SIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256
LV W +P P Y+V ++DP P S+ + + + LV Y I
Sbjct: 429 LVRWDEPDEPNGQIKGYRVYYTMDPT-LPMSMWQIHNVQDS---VLTTIQSLVTSETYTI 484
Query: 257 SV---QTVSEDEISTPTTAQY-RTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKY 312
V +V + S P + + +P +P +F + S T + + WEP Y
Sbjct: 485 RVLAFTSVGDGPFSDPIHVKVLQGVPGQPTNFQVGEVSDTG--VELTWEPAFEKEGIISY 542
Query: 313 QVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ + G P+ K + PT + +GL P Y + VS K
Sbjct: 543 ELHYKEGKDG----PLGKKKFAPTSSFVVDGLRPNTEYFFSLAAVSSK 586
>UNIPROTKB|F1PV45 [details] [associations]
symbol:F1PV45 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004713 "protein tyrosine kinase activity" evidence=IEA]
InterPro:IPR015129 InterPro:IPR000219 InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR011009 Pfam:PF00041 Pfam:PF00069
PROSITE:PS00109 PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00220 GO:GO:0005524 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 SUPFAM:SSF56112
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0005622 GO:GO:0004713 GO:GO:0005089 SUPFAM:SSF48065
GO:GO:0035023 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR022682
SUPFAM:SSF49758 GeneTree:ENSGT00700000104350 InterPro:IPR004168
Pfam:PF02818 Pfam:PF09042 OMA:VTIREPP EMBL:AAEX03017813
Ensembl:ENSCAFT00000022319 Uniprot:F1PV45
Length = 35,180
Score = 101 (40.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 47/182 (25%), Positives = 71/182 (39%)
Query: 27 TYRLDYIPAHGHPPPNTTY----------VSRDIKDNIEFSEGLPG---TKYD---FYLY 70
T RL Y+P G PPP T+ + DIK +F L KYD + L
Sbjct: 21465 TMRL-YVPVKGRPPPKITWSKPNVNLRERIGLDIKST-DFDTFLRCENVNKYDAGKYILT 21522
Query: 71 YTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL-- 128
NS T + P PP N++V S +A + W PPI S V+
Sbjct: 21523 LENSCGKKEYTIVVKVLDTPGPPVNVTVKEISKDSAYVTWDPPIIDGGSPIINYVVEKRD 21582
Query: 129 SEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGK 188
+E+ + TE + + +L G SY ++F+ + +R+ TPG
Sbjct: 21583 AERKSWSTVT-TECSKTSFRVSNLEEGKSYFFRVFAENEYGIGDPGETRDAVKASETPGP 21641
Query: 189 FI 190
+
Sbjct: 21642 VV 21643
Score = 99 (39.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 41/176 (23%), Positives = 71/176 (40%)
Query: 183 PNTPGKFIVWFRNETTLLVLWQ-PSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
P PGK +V+ + + W P Y S T + V S+L+ P
Sbjct: 29498 PGPPGKPVVYNVTSDGMSLTWDAPVYDGGSEVTGFHVE---KKERNSILWQRVNTSPISG 29554
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS--FTYDKASITSNSLRV 298
+ GL+ G Y V + +S+P+ T+ + P+ T D +T ++ +
Sbjct: 29555 REYRATGLMEGLDYQFRVYAENSAGLSSPSDPSKFTLAVSPVDPPGTPDYIDVTRETITL 29614
Query: 299 VWEPP--KGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQ 351
W PP G S+ Y + +R G S + + + ++C + GL PG Y+
Sbjct: 29615 KWNPPLRDGGSKIVAYSIE---KRQG-SDRWVRCNFTDVSECQYTVTGLSPGDRYE 29666
>UNIPROTKB|O75445 [details] [associations]
symbol:USH2A "Usherin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050953 "sensory perception of light stimulus"
evidence=IMP] [GO:0005518 "collagen binding" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0048496
"maintenance of organ identity" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=ISS]
[GO:0060113 "inner ear receptor cell differentiation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] [GO:0002142 "stereocilia
ankle link complex" evidence=ISS] [GO:0016324 "apical plasma
membrane" evidence=ISS] [GO:0032421 "stereocilium bundle"
evidence=ISS] [GO:0060171 "stereocilium membrane" evidence=ISS]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 Orphanet:791 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 GO:GO:0017022 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113
Pfam:PF02210 GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 EMBL:AL445650 Orphanet:231178
GO:GO:0002142 GO:GO:0048496 EMBL:AC092799 GO:GO:0060171
InterPro:IPR006558 SMART:SM00560 EMBL:AF055580 EMBL:AF091889
EMBL:AF091873 EMBL:AF091875 EMBL:AF091876 EMBL:AF091874
EMBL:AF091877 EMBL:AF091879 EMBL:AF091881 EMBL:AF091883
EMBL:AF091888 EMBL:AF091887 EMBL:AF091886 EMBL:AF091885
EMBL:AF091884 EMBL:AF091882 EMBL:AF091880 EMBL:AF091878
EMBL:AY481573 EMBL:AC138024 EMBL:AL358858 EMBL:AC093581
EMBL:AC119429 EMBL:AL139259 EMBL:AL358452 EMBL:AL513305
IPI:IPI00289540 IPI:IPI00410150 IPI:IPI00741527 RefSeq:NP_009054.5
RefSeq:NP_996816.2 UniGene:Hs.655974 ProteinModelPortal:O75445
STRING:O75445 PhosphoSite:O75445 PaxDb:O75445 PRIDE:O75445
Ensembl:ENST00000307340 Ensembl:ENST00000366942
Ensembl:ENST00000366943 GeneID:7399 KEGG:hsa:7399 UCSC:uc001hku.1
UCSC:uc001hkv.3 CTD:7399 GeneCards:GC01M215796 H-InvDB:HIX0028527
HGNC:HGNC:12601 MIM:276901 MIM:608400 MIM:613809 neXtProt:NX_O75445
PharmGKB:PA37228 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 GenomeRNAi:7399
NextBio:28962 Bgee:O75445 CleanEx:HS_USH2A Genevestigator:O75445
GermOnline:ENSG00000042781 InterPro:IPR026915
PANTHER:PTHR10574:SF53 Uniprot:O75445
Length = 5202
Score = 129 (50.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 73/300 (24%), Positives = 122/300 (40%)
Query: 78 DW-LTWTASITTPPDPPTNLSVNVRSG---KTAQIFWSPPI--SGK---YSGFKLKVISL 128
DW T I PP +L V + G T + W+ P+ +GK Y ++ ++ +
Sbjct: 4621 DWTFIQTPEIAPLMQPPPHLEVQMAPGGFQPTVSLLWTGPLQPNGKVLYYELYRRQIATQ 4680
Query: 129 SEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS-KESVAYTSRNFTTKPNTP- 186
K+ P +I + +L P Y+ Q+++V + K ++T T P P
Sbjct: 4681 PRKSNPVLI--YNGSSTSFIDSELLPFTEYEYQVWAVNSAGKAPSSWTWCR--TGPAPPE 4736
Query: 187 GKFIVWFR--NETTLLV-LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA 243
G F + T +V + P P I + Y++ E+VL EG Q
Sbjct: 4737 GLRAPTFHVISSTQAVVNISAPGKPNGIVSLYRLFSSSAHGAETVL---SEGMA---TQQ 4790
Query: 244 AFKGLVPGRAYNISVQTVS-EDEISTPTTAQYRTIPLRPLSFTYDK-ASITSNSLRVVWE 301
GL Y+I V+ + + S TA+ RT P P + + ++ S + W
Sbjct: 4791 TLHGLQAFTNYSIGVEACTCFNCCSKGPTAELRTHPAPPSGLSSPQIGTLASRTASFRWS 4850
Query: 302 PPKGFSE--FDKYQVSINVRRPGASSTPITKSRDEPTQCDMSE-----GLEPGRTYQVLV 354
PP F Y++ +V P S+ P T S+ E + + GL+P TY++ V
Sbjct: 4851 PPM-FPNGVIHSYELQFHVACPPDSALPCTPSQIETKYTGLGQKASLGGLQPYTTYKLRV 4909
Score = 52 (23.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASIT--TPPDPPT-NLSVN 99
LP TKY +Y+ TN VH T + ++T T P P NL+++
Sbjct: 1116 LPYTKYSYYIETTN--VHG-STRSVAVTYKTKPGVPEGNLTLS 1155
>UNIPROTKB|F1N757 [details] [associations]
symbol:F1N757 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060048 "cardiac muscle contraction" evidence=IEA]
[GO:0055008 "cardiac muscle tissue morphogenesis" evidence=IEA]
[GO:0055003 "cardiac myofibril assembly" evidence=IEA] [GO:0051592
"response to calcium ion" evidence=IEA] [GO:0051371 "muscle
alpha-actinin binding" evidence=IEA] [GO:0051015 "actin filament
binding" evidence=IEA] [GO:0048769 "sarcomerogenesis" evidence=IEA]
[GO:0048739 "cardiac muscle fiber development" evidence=IEA]
[GO:0045859 "regulation of protein kinase activity" evidence=IEA]
[GO:0045214 "sarcomere organization" evidence=IEA] [GO:0043621
"protein self-association" evidence=IEA] [GO:0043056 "forward
locomotion" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0031430 "M band" evidence=IEA] [GO:0030241
"skeletal muscle myosin thick filament assembly" evidence=IEA]
[GO:0030240 "skeletal muscle thin filament assembly" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0008307 "structural
constituent of muscle" evidence=IEA] [GO:0007512 "adult heart
development" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005865 "striated muscle thin
filament" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0003300 "cardiac muscle hypertrophy" evidence=IEA] [GO:0002020
"protease binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0035023 "regulation of Rho protein
signal transduction" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR015129 InterPro:IPR000219
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR012337 Pfam:PF00041 Pfam:PF00069 PROSITE:PS00109
PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
SMART:SM00220 GO:GO:0005524 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0031430 GO:GO:0030018 GO:GO:0051592 SUPFAM:SSF49265
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0001701 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0005509
GO:GO:0003676 GO:GO:0001756 GO:GO:0004713 GO:GO:0005089
SUPFAM:SSF48065 GO:GO:0006936 GO:GO:0005865 GO:GO:0030240
GO:GO:0055008 GO:GO:0055003 GO:GO:0045214 GO:GO:0007512
GO:GO:0000794 SUPFAM:SSF53098 GO:GO:0007076 GO:GO:0035023
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR022682 SUPFAM:SSF49758
GO:GO:0030241 GO:GO:0045859 GO:GO:0048739 GO:GO:0043056
GO:GO:0048769 GeneTree:ENSGT00700000104350 InterPro:IPR004168
Pfam:PF02818 Pfam:PF09042 EMBL:DAAA02004137 IPI:IPI00999380
Ensembl:ENSBTAT00000061449 OMA:VTIREPP Uniprot:F1N757
Length = 34,340
Score = 104 (41.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 49/182 (26%), Positives = 71/182 (39%)
Query: 27 TYRLDYIPAHGHPPPNTTY----------VSRDIKDNIEFSEGL---PGTKYD---FYLY 70
T RL Y+P G PPP T+ V DIK +F L KYD + L
Sbjct: 20652 TMRL-YVPVKGRPPPKITWSKPNVNLRERVGLDIKST-DFDTFLRCEKVNKYDAGKYILT 20709
Query: 71 YTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL-- 128
NS T + P PP N++V S +A I W PPI S V+
Sbjct: 20710 LENSCGKKEYTIVVKVLDTPGPPVNVTVKEISKDSAYITWDPPIIDGGSPIINYVVEKRD 20769
Query: 129 SEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGK 188
+E+ + TE + + +L G SY ++F+ + +R+ TPG
Sbjct: 20770 AERKSWSTVT-TECSKTSFRVSNLEEGKSYFFRVFAENEYGIGDPGETRDAVKASETPGP 20828
Query: 189 FI 190
+
Sbjct: 20829 VV 20830
Score = 94 (38.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 41/176 (23%), Positives = 68/176 (38%)
Query: 183 PNTPGKFIVWFRNETTLLVLWQ-PSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
P PGK + + + + W P Y S T Y V S+L+ P
Sbjct: 28699 PGPPGKPVTYNVTSDGMSLTWDAPVYDGGSEVTGYHVE---KKERNSILWQRINMSPISG 28755
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS--FTYDKASITSNSLRV 298
+ GL+ G Y V + +S+P+ T+ + P+ T D +T ++ +
Sbjct: 28756 REYRATGLMEGLDYQFRVFAENSAGLSSPSDPSKFTLAVSPVDPPGTPDYIDVTRETITL 28815
Query: 299 VWEPP--KGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQ 351
W PP G S+ Y + +R G+ D ++C + GL PG Y+
Sbjct: 28816 KWNPPLRDGGSKIVAYSIE---KRQGSDRWTRCNFTDV-SECQYTVTGLSPGDRYE 28867
>UNIPROTKB|Q8WZ42 [details] [associations]
symbol:TTN "Titin" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004713 "protein tyrosine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0031430 "M band" evidence=IEA;IDA] [GO:0043056 "forward
locomotion" evidence=IEA] [GO:0008307 "structural constituent of
muscle" evidence=IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030018 "Z disc" evidence=IDA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IDA]
[GO:0006936 "muscle contraction" evidence=NAS;TAS] [GO:0005516
"calmodulin binding" evidence=TAS;IPI] [GO:0006941 "striated muscle
contraction" evidence=TAS] [GO:0002020 "protease binding"
evidence=IPI] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0002576 "platelet degranulation" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0030049 "muscle filament sliding" evidence=TAS] [GO:0030168
"platelet activation" evidence=TAS] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0051592 "response to calcium ion"
evidence=IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005865 "striated muscle thin filament" evidence=IDA]
[GO:0043621 "protein self-association" evidence=IDA] [GO:0030240
"skeletal muscle thin filament assembly" evidence=IMP] [GO:0030241
"skeletal muscle myosin thick filament assembly" evidence=IMP]
[GO:0045214 "sarcomere organization" evidence=IMP] [GO:0048739
"cardiac muscle fiber development" evidence=IMP] [GO:0055008
"cardiac muscle tissue morphogenesis" evidence=IMP] [GO:0031674 "I
band" evidence=IDA] [GO:0055003 "cardiac myofibril assembly"
evidence=IMP] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEP] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0042805 "actinin binding" evidence=IDA;IPI] [GO:0050790
"regulation of catalytic activity" evidence=IMP] [GO:0045859
"regulation of protein kinase activity" evidence=IMP] [GO:0060048
"cardiac muscle contraction" evidence=IMP] [GO:0051371 "muscle
alpha-actinin binding" evidence=IPI] [GO:0035995 "detection of
muscle stretch" evidence=TAS] [GO:0031433 "telethonin binding"
evidence=ISS;IPI] [GO:0003300 "cardiac muscle hypertrophy"
evidence=IMP] [GO:0048769 "sarcomerogenesis" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] Reactome:REACT_604
InterPro:IPR015129 InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR008266
InterPro:IPR011009 InterPro:IPR012337 Pfam:PF00041 Pfam:PF00069
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50005 PROSITE:PS50011
PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00220 GO:GO:0005829
GO:GO:0005524 GO:GO:0005794 GO:GO:0005576 GO:GO:0030168
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0031430 GO:GO:0030018
PROSITE:PS00678 GO:GO:0051592 GO:GO:0003300 SUPFAM:SSF49265
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0001701 GO:GO:0002576
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0005509 GO:GO:0051015 Orphanet:155 GO:GO:0003676 Orphanet:154
GO:GO:0043621 GO:GO:0001756 GO:GO:0004713 GO:GO:0005516
GO:GO:0005865 GO:GO:0030240 Reactome:REACT_17044 GO:GO:0055008
GO:GO:0055003 GO:GO:0060048 GO:GO:0030049 GO:GO:0045214
GO:GO:0008307 GO:GO:0007512 GO:GO:0000794 SUPFAM:SSF53098
GO:GO:0007076 InterPro:IPR013098 Pfam:PF07679 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 MEROPS:I43.001 InterPro:IPR022682
SUPFAM:SSF49758 GO:GO:0030241 EMBL:AC023270 GO:GO:0045859
GO:GO:0042805 GO:GO:0031433 GO:GO:0035995 EMBL:AJ277893
GO:GO:0048739 Orphanet:293899 Orphanet:293888 Orphanet:293910
GO:GO:0043056 EMBL:AC009948 GO:GO:0048769 Orphanet:609 PDB:2WP3
PDB:2WWK PDB:2WWM PDB:3KNB PDBsum:2WP3 PDBsum:2WWK PDBsum:2WWM
PDBsum:3KNB PDB:1YA5 PDB:2F8V PDBsum:1YA5 PDBsum:2F8V EMBL:X90568
EMBL:X90569 EMBL:AJ277892 EMBL:AC010680 EMBL:FJ695199 EMBL:BC013396
EMBL:BC058824 EMBL:BC070170 EMBL:BC107797 EMBL:X98114 EMBL:X98115
EMBL:X83270 EMBL:AF058332 EMBL:AF525413 EMBL:DQ248309 EMBL:X64698
EMBL:X64699 EMBL:X64697 EMBL:X69490 EMBL:AL713647 IPI:IPI00023283
IPI:IPI00179357 IPI:IPI00375498 IPI:IPI00759542 IPI:IPI00759613
IPI:IPI00759637 IPI:IPI00759754 IPI:IPI00939967 PIR:I38344
PIR:I38346 RefSeq:NP_001243779.1 RefSeq:NP_003310.4
RefSeq:NP_596869.4 RefSeq:NP_596870.2 RefSeq:NP_597676.3
RefSeq:NP_597681.3 UniGene:Hs.134602 PDB:1BPV PDB:1G1C PDB:1NCT
PDB:1NCU PDB:1TIT PDB:1TIU PDB:1TKI PDB:1TNM PDB:1TNN PDB:1WAA
PDB:2A38 PDB:2BK8 PDB:2ILL PDB:2J8H PDB:2J8O PDB:2NZI PDB:2RQ8
PDB:2Y9R PDB:3B43 PDB:3LCY PDB:3LPW PDB:3PUC PDB:3Q5O PDB:3QP3
PDBsum:1BPV PDBsum:1G1C PDBsum:1NCT PDBsum:1NCU PDBsum:1TIT
PDBsum:1TIU PDBsum:1TKI PDBsum:1TNM PDBsum:1TNN PDBsum:1WAA
PDBsum:2A38 PDBsum:2BK8 PDBsum:2ILL PDBsum:2J8H PDBsum:2J8O
PDBsum:2NZI PDBsum:2RQ8 PDBsum:2Y9R PDBsum:3B43 PDBsum:3LCY
PDBsum:3LPW PDBsum:3PUC PDBsum:3Q5O PDBsum:3QP3
ProteinModelPortal:Q8WZ42 DIP:DIP-33449N IntAct:Q8WZ42
MINT:MINT-2881875 PhosphoSite:Q8WZ42 DMDM:108861911 PRIDE:Q8WZ42
Ensembl:ENST00000342175 Ensembl:ENST00000342992
Ensembl:ENST00000359218 Ensembl:ENST00000360870
Ensembl:ENST00000436599 Ensembl:ENST00000460472
Ensembl:ENST00000589042 GeneID:7273 KEGG:hsa:7273 CTD:7273
GeneCards:GC02M179355 H-InvDB:HIX0030529 H-InvDB:HIX0161887
HGNC:HGNC:12403 HPA:CAB022682 HPA:HPA007042 MIM:188840 MIM:600334
MIM:603689 MIM:604145 MIM:608807 MIM:611705 MIM:613765
neXtProt:NX_Q8WZ42 Orphanet:140922 Orphanet:289377 Orphanet:178464
PharmGKB:PA37067 HOGENOM:HOG000203078 HOVERGEN:HBG080473 KO:K12567
ChiTaRS:TTN EvolutionaryTrace:Q8WZ42 GenomeRNAi:7273 NextBio:28431
ArrayExpress:Q8WZ42 Bgee:Q8WZ42 Genevestigator:Q8WZ42
GermOnline:ENSG00000155657 InterPro:IPR004168 Pfam:PF02818
Pfam:PF09042 Uniprot:Q8WZ42
Length = 34,350
Score = 100 (40.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 46/181 (25%), Positives = 72/181 (39%)
Query: 27 TYRLDYIPAHGHPPPNTTYVSRDI--KDNI-------EFSEGLPG---TKYD---FYLYY 71
T RL Y+P G PPP T+ ++ +D I +F L KYD + L
Sbjct: 20637 TMRL-YVPVKGRPPPKITWSKPNVNLRDRIGLDIKSTDFDTFLRCENVNKYDAGKYILTL 20695
Query: 72 TNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL--S 129
NS T + P PP N++V S +A + W PPI S V+ +
Sbjct: 20696 ENSCGKKEYTIVVKVLDTPGPPVNVTVKEISKDSAYVTWEPPIIDGGSPIINYVVQKRDA 20755
Query: 130 EKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKF 189
E+ + TE + + +L G SY ++F+ + +R+ TPG
Sbjct: 20756 ERKSWSTVT-TECSKTSFRVANLEEGKSYFFRVFAENEYGIGDPGETRDAVKASQTPGPV 20814
Query: 190 I 190
+
Sbjct: 20815 V 20815
Score = 98 (39.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 40/176 (22%), Positives = 72/176 (40%)
Query: 183 PNTPGKFIVWFRNETTLLVLWQ-PSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
P PGK +++ + + W P Y S T + V S+L+ + P
Sbjct: 28684 PGPPGKPVIYNVTSDGMSLTWDAPVYDGGSEVTGFHVE---KKERNSILWQKVNTSPISG 28740
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS--FTYDKASITSNSLRV 298
+ GLV G Y V + +S+P+ T+ + P+ T D +T ++ +
Sbjct: 28741 REYRATGLVEGLDYQFRVYAENSAGLSSPSDPSKFTLAVSPVDPPGTPDYIDVTRETITL 28800
Query: 299 VWEPP--KGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQ 351
W PP G S+ Y + +R G + + + + ++C + GL PG Y+
Sbjct: 28801 KWNPPLRDGGSKIVGYSIE---KRQG-NERWVRCNFTDVSECQYTVTGLSPGDRYE 28852
>RGD|1306002 [details] [associations]
symbol:Tnn "tenascin N" species:10116 "Rattus norvegicus"
[GO:0005178 "integrin binding" evidence=ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0007160
"cell-matrix adhesion" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0016049
"cell growth" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
InterPro:IPR003961 Pfam:PF00041 RGD:1306002 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 IPI:IPI00949116
Ensembl:ENSRNOT00000067820 UCSC:RGD:1306002 ArrayExpress:F1LU62
Uniprot:F1LU62
Length = 124
Score = 94 (38.1 bits), Expect = 0.00056, P = 0.00056
Identities = 31/101 (30%), Positives = 45/101 (44%)
Query: 215 YKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQY 274
YK+ + P A V EK P + GL PG AY + V ++ S +
Sbjct: 21 YKIDV-PKSALVQVRTKEK-AVPKDQSSTVLTGLKPGEAYKVFVWAERGNQGSKKADTKA 78
Query: 275 RTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS 315
T P + D+ +T NSL V W+P + +E D+Y VS
Sbjct: 79 LTEIDSPENLVTDR--VTENSLSVSWDPVE--AEIDRYVVS 115
>UNIPROTKB|E2RE80 [details] [associations]
symbol:PTPRF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679 KO:K05695
GeneTree:ENSGT00590000082937 CTD:5792 EMBL:AAEX03009807
RefSeq:XP_862966.1 Ensembl:ENSCAFT00000008256 GeneID:475389
KEGG:cfa:475389 Uniprot:E2RE80
Length = 1897
Score = 119 (46.9 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 66/284 (23%), Positives = 111/284 (39%)
Query: 83 TASITTP--PDPPTNLSVNVRSGKTAQIFW----SPPISGKYSGFKLKVISLSEKTPPRI 136
TA +T P PP +L V + + + W S P+S Y G + + +E +
Sbjct: 310 TAQVTVKALPKPPIDLLVTETTATSVTLTWDSGNSEPVS--YYGIQYRAAG-TEGPFQEV 366
Query: 137 IGFTENPPAGYSLKDLTPGGSYQVQLFSVYD---SKESVAYTSRNFTTKPNTPGKFI-VW 192
G YS+ L+P Y ++ +V S A +R P++P + +
Sbjct: 367 DGVATTR---YSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQAR 423
Query: 193 FRNETTLLVLWQP-SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
+ +T+LV W+P P + Y+V P DA + K G L+PG
Sbjct: 424 MLSASTMLVQWEPPEEPNGLVRGYRVYYTP-DARRPLSAWHKHNTDAG-LLTTVGSLLPG 481
Query: 252 RAYNISVQTVSEDEISTPT-TAQYRT---IPLRPLSFTYDKASITSNSLRVVWE-PPKGF 306
Y++ V + P+ T Q +T +P +P F + S T +++ W PP+
Sbjct: 482 ITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEAESDTR--IQLSWLLPPQ-- 537
Query: 307 SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTY 350
KY++ +T +PT E L+P Y
Sbjct: 538 ERIIKYELVYWAAEDEGQQHKVTF---DPTSSYTLEDLKPDTLY 578
Score = 53 (23.7 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 4 IVHGVHGAN--LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIK------DNIE 55
+V G HG + IK+PE+ + + A G P P T++ + K + IE
Sbjct: 23 LVAGAHGDSKPAFIKVPEDQTGLSGGVASFVCQATGEPKPRITWMKKGKKVSSQRFEVIE 82
Query: 56 FSEG 59
F +G
Sbjct: 83 FDDG 86
>UNIPROTKB|E2RE81 [details] [associations]
symbol:PTPRF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
InterPro:IPR013098 Pfam:PF07679 KO:K05695
GeneTree:ENSGT00590000082937 CTD:5792 OMA:FTPTIEA EMBL:AAEX03009807
GeneID:475389 KEGG:cfa:475389 RefSeq:XP_532613.2
Ensembl:ENSCAFT00000008255 Uniprot:E2RE81
Length = 1906
Score = 119 (46.9 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 66/284 (23%), Positives = 111/284 (39%)
Query: 83 TASITTP--PDPPTNLSVNVRSGKTAQIFW----SPPISGKYSGFKLKVISLSEKTPPRI 136
TA +T P PP +L V + + + W S P+S Y G + + +E +
Sbjct: 310 TAQVTVKALPKPPIDLLVTETTATSVTLTWDSGNSEPVS--YYGIQYRAAG-TEGPFQEV 366
Query: 137 IGFTENPPAGYSLKDLTPGGSYQVQLFSVYD---SKESVAYTSRNFTTKPNTPGKFI-VW 192
G YS+ L+P Y ++ +V S A +R P++P + +
Sbjct: 367 DGVATTR---YSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQAR 423
Query: 193 FRNETTLLVLWQP-SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
+ +T+LV W+P P + Y+V P DA + K G L+PG
Sbjct: 424 MLSASTMLVQWEPPEEPNGLVRGYRVYYTP-DARRPLSAWHKHNTDAG-LLTTVGSLLPG 481
Query: 252 RAYNISVQTVSEDEISTPT-TAQYRT---IPLRPLSFTYDKASITSNSLRVVWE-PPKGF 306
Y++ V + P+ T Q +T +P +P F + S T +++ W PP+
Sbjct: 482 ITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEAESDTR--IQLSWLLPPQ-- 537
Query: 307 SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTY 350
KY++ +T +PT E L+P Y
Sbjct: 538 ERIIKYELVYWAAEDEGQQHKVTF---DPTSSYTLEDLKPDTLY 578
Score = 53 (23.7 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 4 IVHGVHGAN--LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIK------DNIE 55
+V G HG + IK+PE+ + + A G P P T++ + K + IE
Sbjct: 23 LVAGAHGDSKPAFIKVPEDQTGLSGGVASFVCQATGEPKPRITWMKKGKKVSSQRFEVIE 82
Query: 56 FSEG 59
F +G
Sbjct: 83 FDDG 86
>RGD|1311417 [details] [associations]
symbol:Col7a1 "collagen, type VII, alpha 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002035 InterPro:IPR003961 Pfam:PF00041
Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060
SMART:SM00327 RGD:1311417 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR008160 Pfam:PF01391 IPI:IPI00951759
Ensembl:ENSRNOT00000066518 UCSC:RGD:1311417 ArrayExpress:D3ZQ14
Uniprot:D3ZQ14
Length = 2585
Score = 124 (48.7 bits), Expect = 0.00074, P = 0.00074
Identities = 82/349 (23%), Positives = 143/349 (40%)
Query: 20 NLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTVHD 78
NL + YRL++ G PP + D+ + +GL PGT+Y LY T +
Sbjct: 436 NLVPEARGYRLEWHRESGLEPPQKVELLPDVT-RYQL-DGLQPGTEYRLTLY-TLLEGRE 492
Query: 79 WLTWTASITTPPD----PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPP 134
T + T + P NL G+ ++ W+P + F ++ E+T
Sbjct: 493 VATPATVVPTGLEQLVGPVMNLQATELPGQRLRVSWNPVLGATEYRFTVRTPQGVERT-- 550
Query: 135 RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYT---SRNFTTKPNTPGKFIV 191
++ ++ + L D+ G SY V++ + + E A T R+ PG +V
Sbjct: 551 LLLPGSQTT---FDLDDVRAGISYTVRVSARVGTHEGDASTLTIHRDQEAPLIIPGLQVV 607
Query: 192 WFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
+ T + V W P + + +++S PES + P GL PG
Sbjct: 608 -ASDATRIRVAWG-LVPGA--SGFRISWRTGSGPES-----SQTLAPDSTVTDILGLQPG 658
Query: 252 RAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDK 311
+Y ++V + E P RT PL P+ + S+S+ + W G +
Sbjct: 659 TSYQVAVSALRGREEGPPVVIVARTDPLGPVRRVH-LTQAGSSSVSITWTGVPGATG--- 714
Query: 312 YQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKT-VSG 359
Y+VS + G ++ ++ + P ++ +G EP Y V V+T V+G
Sbjct: 715 YRVSWHSGH-GPENSMVSGT---PPWAEI-DG-EPDTEYIVPVRTHVAG 757
>UNIPROTKB|Q8AV57 [details] [associations]
symbol:SDK2 "Protein sidekick-2" species:9031 "Gallus
gallus" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0045202 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
HOGENOM:HOG000231052 HOVERGEN:HBG080083 OrthoDB:EOG4CNQQ4 KO:K16353
EMBL:AF537108 IPI:IPI00571050 RefSeq:NP_989869.1 UniGene:Gga.118
ProteinModelPortal:Q8AV57 SMR:Q8AV57 PRIDE:Q8AV57 GeneID:395215
KEGG:gga:395215 CTD:54549 InParanoid:Q8AV57 NextBio:20815304
Uniprot:Q8AV57
Length = 2177
Score = 123 (48.4 bits), Expect = 0.00080, P = 0.00080
Identities = 44/182 (24%), Positives = 70/182 (38%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS----GKYSGFKLKVISLSEKTPPRIIGFTENPP 144
P P N++V + + W PP + G G+K+ + + P
Sbjct: 1628 PTGAPQNVAVKAATATQLDVTWEPPPTESQNGDIQGYKIHFWEAQRQNESARVKTLFLPE 1687
Query: 145 AGYSLKDLTPGGSYQVQL--FSVY-DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
G LK+LT SY V + F+ D S T+R P+ PG T++ V
Sbjct: 1688 TGVKLKNLTGYTSYWVSIAAFNAAGDGPRSTPVTARTQQAAPSAPGSIRFSELTTTSVNV 1747
Query: 202 LWQPS-YPASIYTHYKVSIDP--P-DAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
W+P P I Y++ +P P D ++ V+ +G P K L G Y
Sbjct: 1748 SWEPPPLPNGILEGYRLVYEPCMPVDGVSKIVTVDVKGN--SPLWMKVKDLAEGITYRFR 1805
Query: 258 VQ 259
++
Sbjct: 1806 IR 1807
>MGI|MGI:102695 [details] [associations]
symbol:Ptprf "protein tyrosine phosphatase, receptor type, F"
species:10090 "Mus musculus" [GO:0001960 "negative regulation of
cytokine-mediated signaling pathway" evidence=ISO] [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA] [GO:0004725
"protein tyrosine phosphatase activity" evidence=ISO] [GO:0005001
"transmembrane receptor protein tyrosine phosphatase activity"
evidence=ISO] [GO:0005158 "insulin receptor binding" evidence=ISO]
[GO:0005768 "endosome" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006470 "protein dephosphorylation" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=ISO] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016791 "phosphatase activity" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISO] [GO:0031345 "negative
regulation of cell projection organization" evidence=ISO]
[GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=ISO]
[GO:0042059 "negative regulation of epidermal growth factor
receptor signaling pathway" evidence=ISO] [GO:0042301 "phosphate
ion binding" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043525 "positive regulation of neuron
apoptotic process" evidence=ISO] [GO:0046627 "negative regulation
of insulin receptor signaling pathway" evidence=ISO] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=ISO]
[GO:0050803 "regulation of synapse structure and activity"
evidence=ISO] [GO:0051387 "negative regulation of neurotrophin TRK
receptor signaling pathway" evidence=ISO] [GO:0060076 "excitatory
synapse" evidence=ISO] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 MGI:MGI:102695 GO:GO:0016021
GO:GO:0005886 GO:GO:0008285 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043525 GO:GO:0043025 GO:GO:0005768 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0050803 GO:GO:0008201 GO:GO:0030426 GO:GO:0050775
GO:GO:0004725 GO:GO:0051387 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007156 GO:GO:0046627 GO:GO:0042059 GO:GO:0060076
GO:GO:0001960 GO:GO:0042301 eggNOG:COG5599 GO:GO:0031345
EMBL:AL626764 HOGENOM:HOG000010250 KO:K05695 GO:GO:0005001
GeneTree:ENSGT00590000082937 OrthoDB:EOG4BG8V3 CTD:5792 OMA:FTPTIEA
EMBL:AF300943 EMBL:AL807774 EMBL:BC057166 IPI:IPI00110264
RefSeq:NP_035343.2 UniGene:Mm.29855 PDB:3PXH PDBsum:3PXH
ProteinModelPortal:A2A8L5 SMR:A2A8L5 IntAct:A2A8L5 STRING:A2A8L5
PhosphoSite:A2A8L5 PaxDb:A2A8L5 PRIDE:A2A8L5
Ensembl:ENSMUST00000049074 GeneID:19268 KEGG:mmu:19268
UCSC:uc008ujq.1 InParanoid:A2A8L5 NextBio:296150 Bgee:A2A8L5
Genevestigator:A2A8L5 Uniprot:A2A8L5
Length = 1898
Score = 119 (46.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 65/289 (22%), Positives = 110/289 (38%)
Query: 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSL 149
P P + N S Q+ W P + ++L + ++ + F +P + Y+L
Sbjct: 512 PAQPADFQANAESDTRIQLSWLLPPQERIVKYELVYWAAEDEGQQHKVTF--DPTSSYTL 569
Query: 150 KDLTPGGSYQVQLFSVYDSKESV---AYTSRNFTTKPNTPGKFIVWFRN-ETTLLVLWQP 205
+DL P Y QL + D V +R + P+ P + + TT+ V W P
Sbjct: 570 EDLKPDTLYHFQLAARSDLGVGVFTPTVEARTAQSTPSAPPQKVTCVSTGSTTVRVSWVP 629
Query: 206 SYPAS----IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT- 260
PA I T Y V+ + D + +V +G + GL Y + V+
Sbjct: 630 P-PADSRNGIITQYSVAYEAVDGEDRKRHVV-DGISREHSSWDLLGLEKWTEYRVWVRAH 687
Query: 261 --VSEDEISTPTTAQY-RTIPLRPLSFTYDKASITSNSLRVVWE---PPKGFSEFDKYQV 314
V S+P + +P P + + S ++ V W+ P K + YQV
Sbjct: 688 TDVGPGPESSPVLVRTDEDVPSGPPR-KVEVEPLNSTAVHVSWKLPVPNKQHGQIRGYQV 746
Query: 315 S-INVRRPGASSTPITKS--RDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+ + + PI + E + +S GL P TY + V + K
Sbjct: 747 TYVRLENGEPRGQPIIQDVMLAEAQETTIS-GLTPETTYSITVAAYTTK 794
Score = 51 (23.0 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 4 IVHGVHGAN--LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIK------DNIE 55
++ G HG + + +K+PE+ + + A G P P T++ + K + IE
Sbjct: 23 LMAGAHGDSKPVFVKVPEDQTGLSGGVASFVCQATGEPKPRITWMKKGKKVSSQRFEVIE 82
Query: 56 FSEG 59
F +G
Sbjct: 83 FDDG 86
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.133 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 361 361 0.00082 117 3 11 23 0.47 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 122
No. of states in DFA: 606 (64 KB)
Total size of DFA: 245 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.64u 0.08s 35.72t Elapsed: 00:00:24
Total cpu time: 35.78u 0.08s 35.86t Elapsed: 00:00:24
Start: Thu Aug 15 12:24:32 2013 End: Thu Aug 15 12:24:56 2013
WARNINGS ISSUED: 1