Query psy4957
Match_columns 143
No_of_seqs 235 out of 1153
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 22:13:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4957.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4957hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0161|consensus 99.6 1.4E-16 3E-21 154.2 5.1 56 87-142 77-132 (1930)
2 COG5022 Myosin heavy chain [Cy 99.6 5.9E-16 1.3E-20 145.5 5.3 88 52-142 8-116 (1463)
3 PTZ00014 myosin-A; Provisional 99.6 5.9E-15 1.3E-19 135.2 6.8 92 51-142 31-146 (821)
4 cd01377 MYSc_type_II Myosin mo 99.5 2.8E-14 6E-19 129.0 5.3 55 88-142 1-55 (693)
5 cd01385 MYSc_type_IX Myosin mo 99.5 4.6E-14 9.9E-19 127.6 5.8 55 88-142 3-57 (692)
6 cd01383 MYSc_type_VIII Myosin 99.5 4.6E-14 1E-18 127.3 5.4 55 88-142 4-58 (677)
7 cd01381 MYSc_type_VII Myosin m 99.5 5.8E-14 1.3E-18 126.5 5.2 50 93-142 1-50 (671)
8 cd01387 MYSc_type_XV Myosin mo 99.5 6.1E-14 1.3E-18 126.5 5.2 50 93-142 2-51 (677)
9 cd01380 MYSc_type_V Myosin mot 99.5 5.8E-14 1.3E-18 126.9 5.0 50 93-142 1-50 (691)
10 cd01378 MYSc_type_I Myosin mot 99.4 6.7E-14 1.5E-18 126.2 5.1 50 93-142 1-50 (674)
11 cd01384 MYSc_type_XI Myosin mo 99.4 7.5E-14 1.6E-18 125.9 5.1 51 92-142 1-52 (674)
12 cd01379 MYSc_type_III Myosin m 99.4 1.3E-13 2.9E-18 123.9 5.2 50 93-142 1-50 (653)
13 cd01386 MYSc_type_XVIII Myosin 99.4 1.6E-13 3.4E-18 125.2 5.2 49 94-142 2-50 (767)
14 smart00242 MYSc Myosin. Large 99.4 2.6E-13 5.6E-18 122.5 5.7 55 88-142 2-56 (677)
15 cd01382 MYSc_type_VI Myosin mo 99.4 2.9E-13 6.3E-18 122.8 5.6 51 92-142 4-55 (717)
16 PF00063 Myosin_head: Myosin h 99.4 3.1E-13 6.7E-18 121.6 4.3 49 94-142 1-49 (689)
17 cd00124 MYSc Myosin motor doma 99.4 6.7E-13 1.4E-17 119.8 5.3 50 93-142 1-50 (679)
18 COG5638 Uncharacterized conser 99.3 5.3E-13 1.1E-17 113.7 2.5 50 1-50 322-372 (622)
19 KOG0160|consensus 99.2 2.7E-11 5.8E-16 111.1 5.1 51 92-142 8-59 (862)
20 KOG0162|consensus 99.2 1.8E-11 3.9E-16 110.1 3.8 52 91-142 17-68 (1106)
21 KOG0164|consensus 99.1 3.7E-11 8E-16 107.9 4.3 54 89-142 5-58 (1001)
22 KOG2318|consensus 99.1 3.9E-11 8.5E-16 105.3 2.4 49 2-50 334-383 (650)
23 KOG0163|consensus 99.1 8.9E-11 1.9E-15 106.1 3.6 51 92-142 57-108 (1259)
24 KOG4229|consensus 98.5 4E-08 8.7E-13 92.3 1.9 59 84-142 53-112 (1062)
25 cd01779 Myosin_IXb_RA ubitquit 85.8 0.33 7.2E-06 34.2 0.7 27 35-61 68-105 (105)
26 COG5664 Predicted secreted Zn- 58.9 3.5 7.6E-05 32.2 0.3 17 1-17 60-76 (201)
No 1
>KOG0161|consensus
Probab=99.64 E-value=1.4e-16 Score=154.21 Aligned_cols=56 Identities=32% Similarity=0.558 Sum_probs=54.5
Q ss_pred CCCCCCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 87 YQPQDREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 87 ~~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
.||..+.++||+.|++||+++||+||+.||..+.||||+|.+||+||||+++|||+
T Consensus 77 NPPkfdk~eDMa~LT~lNeasVL~nL~~RY~~~lIyTYSGLFcVviNPyk~lpiYt 132 (1930)
T KOG0161|consen 77 NPPKFDKVEDMAELTFLNEASVLHNLKQRYASDLIYTYSGLFCVVINPYKRLPIYT 132 (1930)
T ss_pred CCCCccccccHHHhcccChHHHHhhHHHHHHhChHHHcccceeEEecCCcCCCCCC
Confidence 67888999999999999999999999999999999999999999999999999997
No 2
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=99.60 E-value=5.9e-16 Score=145.53 Aligned_cols=88 Identities=31% Similarity=0.445 Sum_probs=69.6
Q ss_pred ccceEeeecccCCccccCCcccCch----h--------------hhhhh---hcccCCCCCCCCCCcCCCCCCChHHHHH
Q psy4957 52 RDFLFYLREKLNDNIWADGFNIDPE----L--------------IRDYF---YRFLYQPQDREYPDLCQLPDLNETTLLE 110 (143)
Q Consensus 52 ~~~r~~l~~~~~~~~w~~~~~~~~~----~--------------~~~~~---~~~~~~~~~~~~~Dl~~L~~l~e~~vl~ 110 (143)
.|...|..+ .+..|+.+..++.. . +.... .+- ..|..++++||+.|++||||+|++
T Consensus 8 ~g~~~w~p~--~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~P~~~~vdDLt~LSyLNEpsVl~ 84 (1463)
T COG5022 8 VGSGCWIPD--EEKGWIWAEIIKEAFNKGKVTEEGKKEDGESVSVKKKVLGNDRI-KLPKFDGVDDLTELSYLNEPAVLH 84 (1463)
T ss_pred cCceeeeec--cccceeeeeechhhhhccccccchhhccCcccceeehhcccccc-cCccccCchhhhhhhccCcHHHHH
Confidence 467788888 56678887655210 1 00000 111 256788999999999999999999
Q ss_pred HHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 111 NLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 111 ~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+|+.||.+++||||+|.+|||||||+.+|||+
T Consensus 85 nL~kRY~n~~IYTYSGlvLIAvNPy~~L~iYt 116 (1463)
T COG5022 85 NLEKRYNNGQIYTYSGLVLIAVNPYRDLGIYT 116 (1463)
T ss_pred HHHHHhhcCceeEEeeeEEEEecCcccCCCcc
Confidence 99999999999999999999999999999997
No 3
>PTZ00014 myosin-A; Provisional
Probab=99.55 E-value=5.9e-15 Score=135.24 Aligned_cols=92 Identities=25% Similarity=0.370 Sum_probs=68.4
Q ss_pred cccceEeeec-----ccCCccccCCccc---Cchhhh----------h-hh--hc-ccCCCC--CCCCCCcCCCCCCChH
Q psy4957 51 KRDFLFYLRE-----KLNDNIWADGFNI---DPELIR----------D-YF--YR-FLYQPQ--DREYPDLCQLPDLNET 106 (143)
Q Consensus 51 ~~~~r~~l~~-----~~~~~~w~~~~~~---~~~~~~----------~-~~--~~-~~~~~~--~~~~~Dl~~L~~l~e~ 106 (143)
..|..+|... .+++..|+.|+++ +++.+. . .+ .. +...|. ...++||+.|+++||+
T Consensus 31 ~~g~~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~n~~~~~~~~~Dl~~L~~lnE~ 110 (821)
T PTZ00014 31 LKGFYVWTDKAPAVKEDPDLMFAKCLVLPGSTGEKLTLKQIDPPTNSTFEVKPEHAFNANSQIDPMTYGDIGLLPHTNIP 110 (821)
T ss_pred ccCCeEEeeCCCCCCCCchhheeeEEEEEecCCCEEEEEEecCCCCcEEEeeHHHhhhcCCCCCcCCcchhhhCCCCCHH
Confidence 3578888864 4567778887655 111110 0 01 11 122232 3468999999999999
Q ss_pred HHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 107 TLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 107 ~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+||++|+.||..+.||||+|++|||||||+.+|+|+
T Consensus 111 ~vL~nL~~Ry~~~~IYTy~G~iLIavNPyk~l~~y~ 146 (821)
T PTZ00014 111 CVLDFLKHRYLKNQIYTTADPLLVAINPFKDLGNTT 146 (821)
T ss_pred HHHHHHHHHHcCCCCeeeECCEEEEECCCCCCCCCc
Confidence 999999999999999999999999999999999996
No 4
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=99.48 E-value=2.8e-14 Score=128.99 Aligned_cols=55 Identities=38% Similarity=0.629 Sum_probs=52.5
Q ss_pred CCCCCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 88 QPQDREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 88 ~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+|..++++||+.|.++||++||++|+.||.++.||||+|+||||||||+.+|+|+
T Consensus 1 p~~~~~v~Dl~~L~~l~E~~il~~L~~Ry~~~~iYT~~G~iLIavNP~k~l~ly~ 55 (693)
T cd01377 1 PPKFDKVEDMAELTHLNEASVLHNLRERYYSDLIYTYSGLFCVAVNPYKRLPIYT 55 (693)
T ss_pred CCcccCcchhhhCCcCCHHHHHHHHHHHHhcCCcEEeecceeEeecCCccCCCCC
Confidence 4667899999999999999999999999999999999999999999999999996
No 5
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=99.47 E-value=4.6e-14 Score=127.57 Aligned_cols=55 Identities=65% Similarity=1.063 Sum_probs=52.1
Q ss_pred CCCCCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 88 QPQDREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 88 ~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
.....+++||+.|+++||++||++|+.||.++.||||+|++|||||||+.+|+|+
T Consensus 3 ~~~~~~~~Dl~~L~~lnE~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~~y~ 57 (692)
T cd01385 3 QRQQREYDDLCNLPELTEGTLLKNLRHRFLQGHIYTYAGSILVAVNPFKFLPIYN 57 (692)
T ss_pred CCCcCCCChhhhCCCCCHHHHHHHHHHHHhcCCCeEeECCEEEEECCCcCCCCCC
Confidence 4556789999999999999999999999999999999999999999999999996
No 6
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=99.47 E-value=4.6e-14 Score=127.27 Aligned_cols=55 Identities=40% Similarity=0.489 Sum_probs=52.3
Q ss_pred CCCCCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 88 QPQDREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 88 ~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+|...+++||+.|+++||++|+++|+.||..+.||||+|++|||||||+.+|+|+
T Consensus 4 p~~~~~v~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~ly~ 58 (677)
T cd01383 4 PDILDGVDDLMQLSYLNEPSVLYNLQYRYSQDLIYTKAGPVLVAVNPFKEVPLYG 58 (677)
T ss_pred cccccCcchhhhCCCCCHHHHHHHHHHHHcCCCCeEEECCEEEEEcCCcCCCCCC
Confidence 4556799999999999999999999999999999999999999999999999996
No 7
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=99.45 E-value=5.8e-14 Score=126.53 Aligned_cols=50 Identities=42% Similarity=0.678 Sum_probs=48.6
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 93 EYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 93 ~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+++||+.|+++||++||++|+.||..+.||||+|++|||||||+.+|+|+
T Consensus 1 gv~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~~y~ 50 (671)
T cd01381 1 GVEDMITLGDLHEAGILRNLLIRYKKKLIYTYTGSILVAVNPYQILPIYT 50 (671)
T ss_pred CcchhhhCCCCCHHHHHHHHHHHHccCCCeEeeCCEEEEeCCCccCCCCC
Confidence 57899999999999999999999999999999999999999999999996
No 8
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=99.45 E-value=6.1e-14 Score=126.50 Aligned_cols=50 Identities=52% Similarity=0.811 Sum_probs=48.9
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 93 EYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 93 ~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+++||+.|+++||++||++|+.||..+.||||+|++|||||||+.+|+|+
T Consensus 2 gv~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~ly~ 51 (677)
T cd01387 2 GVEDMTQLEDLQETTVLWNLKLRFERNLIYTYIGSILVSVNPYKMFPIYG 51 (677)
T ss_pred CcchhhhCCCCCHHHHHHHHHHHHcCCCCeEeECCEEEEECCCCCCCCCC
Confidence 68999999999999999999999999999999999999999999999997
No 9
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=99.45 E-value=5.8e-14 Score=126.91 Aligned_cols=50 Identities=40% Similarity=0.627 Sum_probs=48.6
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 93 EYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 93 ~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+++||+.|+++||++||++|+.||..+.||||+|++|||||||+.+|+|+
T Consensus 1 g~~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~~Y~ 50 (691)
T cd01380 1 GKDDLTNLSYLHEPAVLHNLRVRFIQKQIYTYSGIVLVAINPYARLPIYG 50 (691)
T ss_pred CchhhhhCCCCCHHHHHHHHHHHHcCCCCEEeECCEEEEeCCCCCCCcCC
Confidence 57899999999999999999999999999999999999999999999996
No 10
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=99.45 E-value=6.7e-14 Score=126.18 Aligned_cols=50 Identities=42% Similarity=0.720 Sum_probs=48.6
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 93 EYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 93 ~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+++||+.|+++||++||++|+.||.++.||||+|++|||||||+.+|+|+
T Consensus 1 gv~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~ly~ 50 (674)
T cd01378 1 GVDDLVLLSKISEEAIVENLKKRFQNDLIYTYIGPVLISVNPFKQLPIYT 50 (674)
T ss_pred CcchhhhCCCCCHHHHHHHHHHHHhcCCCeeccCCcEEEEcCCCCCCCCC
Confidence 57899999999999999999999999999999999999999999999996
No 11
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=99.44 E-value=7.5e-14 Score=125.88 Aligned_cols=51 Identities=43% Similarity=0.709 Sum_probs=49.2
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCC-CCC
Q psy4957 92 REYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFF-CED 142 (143)
Q Consensus 92 ~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lp-iY~ 142 (143)
++++||+.|+++||++||++|+.||.++.||||+|++|||||||+.+| ||+
T Consensus 1 ~gv~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~~iy~ 52 (674)
T cd01384 1 EGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYD 52 (674)
T ss_pred CCcchHhhCCCCCHHHHHHHHHHHHhcCCCeeeECCEEEEECCCCcCCcCCC
Confidence 378999999999999999999999999999999999999999999999 996
No 12
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=99.42 E-value=1.3e-13 Score=123.93 Aligned_cols=50 Identities=46% Similarity=0.747 Sum_probs=48.3
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 93 EYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 93 ~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+++||+.|+++||++||++|+.||.++.||||+|++|||||||+.+|+|+
T Consensus 1 ~~~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~ly~ 50 (653)
T cd01379 1 DMDDLATLEVLDEDTIVEQLQKRYETNQIYTYVGDILIAVNPFQQLGLYT 50 (653)
T ss_pred CcchhhcCCCCCHHHHHHHHHHHHcCCCCeEeECCEEEEECCCCCCCCCC
Confidence 46899999999999999999999999999999999999999999999996
No 13
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=99.41 E-value=1.6e-13 Score=125.23 Aligned_cols=49 Identities=35% Similarity=0.472 Sum_probs=47.9
Q ss_pred CCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 94 YPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 94 ~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
++||+.|+++||++|+++|+.||..+.||||+|++|||||||+.+|||+
T Consensus 2 v~Dl~~L~~l~E~~il~~L~~Ry~~~~IYT~~G~iLIavNPyk~l~iY~ 50 (767)
T cd01386 2 VEDLASLVYLNESSVLHTLRQRYAANLIHTCAGPDLLVLNPMAPLALYS 50 (767)
T ss_pred cchhhcCCCCCHHHHHHHHHHHHcCCCCeEeECCeEEEECCCCCCCCCC
Confidence 6899999999999999999999999999999999999999999999996
No 14
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=99.40 E-value=2.6e-13 Score=122.45 Aligned_cols=55 Identities=40% Similarity=0.619 Sum_probs=52.5
Q ss_pred CCCCCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 88 QPQDREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 88 ~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+|...+++||+.|+++||++|+++|+.||..+.||||+|++|||||||+.+|+|+
T Consensus 2 p~~~~~~~Dl~~L~~l~e~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~y~ 56 (677)
T smart00242 2 PPKFEGVEDLVLLTYLNEPAVLHNLKKRYLKDLIYTYIGLVLVAVNPYKQLPIYT 56 (677)
T ss_pred CcccCCcchhhcCCCCCHHHHHHHHHHHHhhCCccccccceEEEecCCccCCCCC
Confidence 4667899999999999999999999999999999999999999999999999996
No 15
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=99.40 E-value=2.9e-13 Score=122.78 Aligned_cols=51 Identities=47% Similarity=0.714 Sum_probs=49.3
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCC-CCC
Q psy4957 92 REYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFF-CED 142 (143)
Q Consensus 92 ~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lp-iY~ 142 (143)
.+++||+.|++|||++||++|+.||.++.||||+|++|||||||+.+| +|+
T Consensus 4 ~~v~Dl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~~lY~ 55 (717)
T cd01382 4 KDVEDNCSLMYLNEATLLNNIRVRYSKDKIYTYVANILIAVNPYFDIPKLYS 55 (717)
T ss_pred CCcchhhcCCCCCHHHHHHHHHHHHcCCCCEEeECCEEEEECCCCcccccCC
Confidence 478999999999999999999999999999999999999999999998 996
No 16
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=99.37 E-value=3.1e-13 Score=121.65 Aligned_cols=49 Identities=49% Similarity=0.788 Sum_probs=40.3
Q ss_pred CCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 94 YPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 94 ~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
++||+.|.++||++||++|+.||..+.||||+|++|||||||+.+|+|+
T Consensus 1 veDl~~l~~l~e~~il~~L~~R~~~~~iyT~~G~~Li~vNP~~~l~~y~ 49 (689)
T PF00063_consen 1 VEDLASLSHLNEASILHNLRQRYKKDLIYTYIGPILIAVNPYKPLPLYS 49 (689)
T ss_dssp -SBGGGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--STSS
T ss_pred CChhhhCCCCCHHHHHHHHHHHHccCCccccCCCeEEEECCchhhhhhh
Confidence 5899999999999999999999999999999999999999999999997
No 17
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=99.36 E-value=6.7e-13 Score=119.78 Aligned_cols=50 Identities=52% Similarity=0.781 Sum_probs=48.3
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 93 EYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 93 ~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+++||+.|+++||++|+++|+.||..+.||||+|++|||||||+.+|+|+
T Consensus 1 ~~~Dl~~L~~l~e~~vl~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~~y~ 50 (679)
T cd00124 1 GVDDLASLPHLNEATVLNNLRQRYKKDLIYTYAGPILIAVNPYKDLPNYG 50 (679)
T ss_pred CCcchhhCCCCCHHHHHHHHHHHHcCCCCeEeECCEEEEECCCCCCCCCC
Confidence 47899999999999999999999999999999999999999999999986
No 18
>COG5638 Uncharacterized conserved protein [Function unknown]
Probab=99.32 E-value=5.3e-13 Score=113.70 Aligned_cols=50 Identities=28% Similarity=0.595 Sum_probs=45.8
Q ss_pred CchhhhccccceeecCCChhHHHHHhhhhc-CCccccchhhhhhcCccccc
Q psy4957 1 MNSALQQVKVNLTWDETDPDRVEAVSKLMS-GDVDEANLKTYLATSSEEEG 50 (143)
Q Consensus 1 ~~~al~~s~v~ltWd~~d~~r~~~~~~~~~-~e~~e~dl~~ylas~s~d~~ 50 (143)
+|.|||||+||||||++||+|..+++++|+ ++|.++||++|+|+..+|++
T Consensus 322 ~tdalqhs~vklswd~~~~~r~dl~k~AFt~~~i~d~dFsay~as~~sde~ 372 (622)
T COG5638 322 VTDALQHSKVKLSWDAEDPHRKDLCKEAFTDDGIRDKDFSAYTASKLSDED 372 (622)
T ss_pred hhhhhhhcccccccccCCchHHHHHHHhhcccccccchHHHHhhhhccccc
Confidence 489999999999999999999999999999 88999999999999655543
No 19
>KOG0160|consensus
Probab=99.17 E-value=2.7e-11 Score=111.13 Aligned_cols=51 Identities=41% Similarity=0.624 Sum_probs=49.6
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCC-CCC
Q psy4957 92 REYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFF-CED 142 (143)
Q Consensus 92 ~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lp-iY~ 142 (143)
.+++|++.|+++|||+||++|+.||..+.||||.|.+|||||||+.+| +|+
T Consensus 8 ~~~dDlt~lsyl~epaVL~~L~~Ry~~~~IYty~G~vLiAiNPf~~~~~ly~ 59 (862)
T KOG0160|consen 8 MGVDDLTTLSYLHEPAVLHNLAKRYEQNQIYTYKGIVLIAINPFKRLPHLYG 59 (862)
T ss_pred CCccccccCCccCcHHHHHHHHHhhhhcccchhhceeeeeeccccccchhcc
Confidence 799999999999999999999999999999999999999999999999 886
No 20
>KOG0162|consensus
Probab=99.16 E-value=1.8e-11 Score=110.10 Aligned_cols=52 Identities=38% Similarity=0.641 Sum_probs=50.1
Q ss_pred CCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 91 DREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 91 ~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
..+++||+.|+.+++.+|.+||+.||+++.||||+|++||+||||+.+|+|+
T Consensus 17 ~vGVdDm~LLsKiteesI~eNLkkRf~n~~IfTYIG~VLISVNPFk~m~~ft 68 (1106)
T KOG0162|consen 17 HVGVDDMVLLSKITEESINENLKKRFMNGYIFTYIGHVLISVNPFKQMPYFT 68 (1106)
T ss_pred eccccceeehhhccHHHHHHHHHHHhhcCceEEEeeeEEEeecchhccccch
Confidence 4689999999999999999999999999999999999999999999999986
No 21
>KOG0164|consensus
Probab=99.13 E-value=3.7e-11 Score=107.91 Aligned_cols=54 Identities=35% Similarity=0.701 Sum_probs=51.3
Q ss_pred CCCCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 89 PQDREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 89 ~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+...+++|+..|..+++++++.||+.||.++.||||+|.+|||||||+.++||+
T Consensus 5 ~~~~Gv~DfVLle~~~~~~f~~NLrlRf~~g~IYTyIGeV~VsvNPYrql~IYg 58 (1001)
T KOG0164|consen 5 RDEVGVQDFVLLETVSEESFMENLRLRFENGRIYTYIGEVLVSVNPYRQLNIYG 58 (1001)
T ss_pred ccccCceeeEeeccccHHHHHHHHHHHHhcCceEEEEccEEEEecchhhcCccC
Confidence 445689999999999999999999999999999999999999999999999997
No 22
>KOG2318|consensus
Probab=99.09 E-value=3.9e-11 Score=105.34 Aligned_cols=49 Identities=41% Similarity=0.756 Sum_probs=44.5
Q ss_pred chhhhccccceeecCCChhHHHHHhhhhcC-CccccchhhhhhcCccccc
Q psy4957 2 NSALQQVKVNLTWDETDPDRVEAVSKLMSG-DVDEANLKTYLATSSEEEG 50 (143)
Q Consensus 2 ~~al~~s~v~ltWd~~d~~r~~~~~~~~~~-e~~e~dl~~ylas~s~d~~ 50 (143)
|+|||||+|+||||+++|+|.+++.++|++ ++.+.||++|||+++++++
T Consensus 334 t~Alq~s~vkltWDE~d~~R~~l~~~kf~~~~l~d~d~~~~laS~~sde~ 383 (650)
T KOG2318|consen 334 TRALQHSKVKLTWDETDPHRKKLFNEKFNGEELEDLDFSAYLASSDSDEE 383 (650)
T ss_pred HHHHHhccccccccccCHHHHHHHHHhhcchhhhhchHHHhhcCCccccc
Confidence 689999999999999999999999999995 5889999999999776544
No 23
>KOG0163|consensus
Probab=99.06 E-value=8.9e-11 Score=106.09 Aligned_cols=51 Identities=45% Similarity=0.742 Sum_probs=48.5
Q ss_pred CCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCC-CCC
Q psy4957 92 REYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFF-CED 142 (143)
Q Consensus 92 ~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lp-iY~ 142 (143)
.+++|-|.|-+|||+.+|+|++.||.++.||||+.+||||||||+.++ +|+
T Consensus 57 k~veDNC~Lm~LNEATlL~Nik~RY~k~kIYtYVANILIavNPY~~I~~lYs 108 (1259)
T KOG0163|consen 57 KDVEDNCELMHLNEATLLNNIKLRYYKDKIYTYVANILIAVNPYQEIDGLYS 108 (1259)
T ss_pred cccccccceeeccHHHHhhhhhhhhccCchhhhhhhhheeccchhhcccccC
Confidence 478899999999999999999999999999999999999999999988 885
No 24
>KOG4229|consensus
Probab=98.50 E-value=4e-08 Score=92.31 Aligned_cols=59 Identities=44% Similarity=0.660 Sum_probs=55.0
Q ss_pred cccCCCCCCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCC-CCC
Q psy4957 84 RFLYQPQDREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFF-CED 142 (143)
Q Consensus 84 ~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lp-iY~ 142 (143)
++++.+...+.+||+.|..+++..++.+|..||..+.||||.|+|+++||||+.+| ||.
T Consensus 53 ~~~~~~~~~~~~Dl~~l~~l~e~~~~~nl~~R~~~~~Iy~y~gsil~~lnp~~~~~fiy~ 112 (1062)
T KOG4229|consen 53 KALHRPQVEDVEDLAQLEDLSEATILENLLVRYKRNPIYEYLGSILVALNPLQPIPFLYL 112 (1062)
T ss_pred ccccccccccHHHHhhccccchhhhhHHHHHHHccCCceeeechhhhhcCcccccccccc
Confidence 45567778899999999999999999999999999999999999999999999999 885
No 25
>cd01779 Myosin_IXb_RA ubitquitin-like domain of Myosin_IXb_RA. Myosin_IXb_RA RasGTP binding domain from guanine nucleotide exchange factors. In some proteins the domain acts as a RasGTP effector (AF6, canoe and RalGDS, for example), but in other cases it may not bind to RasGTP at all.
Probab=85.81 E-value=0.33 Score=34.23 Aligned_cols=27 Identities=19% Similarity=0.269 Sum_probs=20.6
Q ss_pred ccchhh------hhhcCccccc-----cccceEeeecc
Q psy4957 35 EANLKT------YLATSSEEEG-----KRDFLFYLREK 61 (143)
Q Consensus 35 e~dl~~------ylas~s~d~~-----~~~~r~~l~~~ 61 (143)
||-|.+ .+.+|+...+ ++||+|+||++
T Consensus 68 EwvL~p~D~pvqR~lLWPr~aqe~hp~~~gyyFlLqer 105 (105)
T cd01779 68 EWVLDPTDSPVQRVLLWPRRAQEEHPQEDGYYFLLQER 105 (105)
T ss_pred eeecCcccCceeeEEeccHHHHhcCCCcCceEEEEecC
Confidence 676666 7888987543 47999999984
No 26
>COG5664 Predicted secreted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones]
Probab=58.89 E-value=3.5 Score=32.17 Aligned_cols=17 Identities=35% Similarity=0.737 Sum_probs=15.2
Q ss_pred CchhhhccccceeecCC
Q psy4957 1 MNSALQQVKVNLTWDET 17 (143)
Q Consensus 1 ~~~al~~s~v~ltWd~~ 17 (143)
|+.|.-|+..|||||.+
T Consensus 60 ~~raIAhTsfkltW~rd 76 (201)
T COG5664 60 MTRAIAHTSFKLTWDRD 76 (201)
T ss_pred hhheeeeeeeEEEEecc
Confidence 67899999999999874
Done!