Query psy4957
Match_columns 143
No_of_seqs 235 out of 1153
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 22:13:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4anj_A Unconventional myosin-V 99.7 1.1E-17 3.7E-22 155.0 5.5 89 52-142 3-108 (1052)
2 4db1_A Myosin-7; S1DC, cardiac 99.7 1.2E-17 4.2E-22 151.0 5.2 89 52-142 33-135 (783)
3 1w7j_A Myosin VA; motor protei 99.6 1.6E-16 5.5E-21 143.9 6.5 89 52-142 9-120 (795)
4 1i84_S Smooth muscle myosin he 99.6 1.1E-16 3.8E-21 149.5 4.9 89 52-142 30-133 (1184)
5 2dfs_A Myosin-5A; myosin-V, in 99.6 2.3E-16 7.9E-21 146.7 6.8 89 52-142 9-120 (1080)
6 1kk8_A Myosin heavy chain, str 99.6 2.2E-16 7.4E-21 143.7 6.0 89 52-142 30-133 (837)
7 1w9i_A Myosin II heavy chain; 99.6 2.7E-16 9.1E-21 142.0 6.0 91 52-142 31-136 (770)
8 2ycu_A Non muscle myosin 2C, a 99.6 2.7E-16 9.2E-21 145.2 6.0 88 53-142 8-110 (995)
9 2v26_A Myosin VI; calmodulin-b 99.6 7.6E-16 2.6E-20 139.3 6.0 56 87-142 48-104 (784)
10 1g8x_A Myosin II heavy chain f 99.6 5.8E-16 2E-20 143.2 5.0 89 52-142 31-136 (1010)
11 1lkx_A Myosin IE heavy chain; 99.5 1.9E-14 6.4E-19 128.9 5.5 53 90-142 6-58 (697)
No 1
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=99.69 E-value=1.1e-17 Score=155.03 Aligned_cols=89 Identities=30% Similarity=0.423 Sum_probs=69.1
Q ss_pred ccceEeeecccCCccccCCcccC--chh--hh------hh--h--hc--ccCCCCCCCCCCcCCCCCCChHHHHHHHHHH
Q psy4957 52 RDFLFYLREKLNDNIWADGFNID--PEL--IR------DY--F--YR--FLYQPQDREYPDLCQLPDLNETTLLENLRAR 115 (143)
Q Consensus 52 ~~~r~~l~~~~~~~~w~~~~~~~--~~~--~~------~~--~--~~--~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~R 115 (143)
+|.++|+++ ++..|+.|++++ ++. ++ .. + .. ...+|...+++||+.|++|||++||+||+.|
T Consensus 3 ~G~~VWv~d--~~~~~~~a~v~~~~~~~~~v~~~~~~g~~~~~~~~~v~~~n~~~~~~veDl~~L~~LnE~svL~nL~~R 80 (1052)
T 4anj_A 3 DGKPVWAPH--PTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLMYLNEATLLHNIKVR 80 (1052)
T ss_dssp -CCCEEEEE--TTTEEEEEEEEEECSSEEEEEEC----CCEEEEGGGCEECCSCSSCCCSBGGGSSSCSHHHHHHHHHHH
T ss_pred CCCEEEEEc--CCCCEEEEEEEEEcCCcEEEEEeCCCCcEEEecHHHcCCCCCCccCCCcccccCCCCCHHHHHHHHHHH
Confidence 467899998 677898886541 111 10 00 0 11 1234456789999999999999999999999
Q ss_pred hhcCcccccccCeEEEecCCCCCC-CCC
Q psy4957 116 FNAGHIYTYVGSILIAVNPFKLFF-CED 142 (143)
Q Consensus 116 f~~~~IYTy~G~iLvaVNPyk~lp-iY~ 142 (143)
|..+.||||+|++|||||||+.+| ||+
T Consensus 81 y~~~~IYTy~G~iLIaVNPyk~lp~iY~ 108 (1052)
T 4anj_A 81 YSKDRIYTYVANILIAVNPYFDIPKIYS 108 (1052)
T ss_dssp HHTTCCEEEETTEEEEECCSSCCTTTTS
T ss_pred HcCCCcEEeECCEEEEECCCCCccccCC
Confidence 999999999999999999999998 997
No 2
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=99.69 E-value=1.2e-17 Score=150.96 Aligned_cols=89 Identities=20% Similarity=0.299 Sum_probs=71.3
Q ss_pred ccceEeeecccCCccccCCccc--Cchhhh-----h---hh----hcccCCCCCCCCCCcCCCCCCChHHHHHHHHHHhh
Q psy4957 52 RDFLFYLREKLNDNIWADGFNI--DPELIR-----D---YF----YRFLYQPQDREYPDLCQLPDLNETTLLENLRARFN 117 (143)
Q Consensus 52 ~~~r~~l~~~~~~~~w~~~~~~--~~~~~~-----~---~~----~~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~ 117 (143)
.|.++|+++ ++..|+.|++. ++..+. + .+ .....+|...+++||+.|++|||++||+||+.||.
T Consensus 33 ~~~~vWv~d--~~~~~~~~~v~~~~~~~~~v~~~~g~~~~v~~~~v~~~np~~~~~~eDl~~L~~LnE~svL~nL~~Ry~ 110 (783)
T 4db1_A 33 LKKDVFVPD--DKQEFVKAKIVSREGGKVTAETEYGKTVTVKEDQVMQQNPPKFDKIEDMAMLTFLHEPAVLYNLKDRYG 110 (783)
T ss_dssp TTTEEEEEC--SSSSEEEEEEEEECSSEEEEEETTTEEEEEEGGGCEECCCGGGTTCSBGGGCSCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEEC--CCCCEEEEEEEEecCCEEEEEECCCCEEeCCHHHcccCCCCccCCcchhhccccccHHHHHHHHHHHhc
Confidence 478999998 67789988644 111111 0 00 11235566789999999999999999999999999
Q ss_pred cCcccccccCeEEEecCCCCCCCCC
Q psy4957 118 AGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 118 ~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
.+.||||+|++|||||||+.+|||+
T Consensus 111 ~~~IYTy~G~iLvavNPyk~l~iY~ 135 (783)
T 4db1_A 111 SWMIYTYSGLFCVTVNPYKWLPVYT 135 (783)
T ss_dssp TTCCEEEETTEEEEECCSSCCSCSS
T ss_pred CCceEEecCceeEecCCCccCCCCC
Confidence 9999999999999999999999997
No 3
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=99.64 E-value=1.6e-16 Score=143.88 Aligned_cols=89 Identities=25% Similarity=0.436 Sum_probs=69.5
Q ss_pred ccceEeeecccCCccccCCcccC----chh-h--h---h---hh-h-------ccc-CCCCCCCCCCcCCCCCCChHHHH
Q psy4957 52 RDFLFYLREKLNDNIWADGFNID----PEL-I--R---D---YF-Y-------RFL-YQPQDREYPDLCQLPDLNETTLL 109 (143)
Q Consensus 52 ~~~r~~l~~~~~~~~w~~~~~~~----~~~-~--~---~---~~-~-------~~~-~~~~~~~~~Dl~~L~~l~e~~vl 109 (143)
.|.++|+++ ++..|+.|++.. +.. + + + .+ . ..+ .+|...+++||+.|++|||++||
T Consensus 9 ~g~~vwv~~--~~~~~~~~~v~~~~~~~~~~~~v~~~~g~~~~v~~~~~~~~~~~~~np~~~~~~~Dl~~L~~l~E~svL 86 (795)
T 1w7j_A 9 KYARVWIPD--PEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDILVGENDLTALSYLHEPAVL 86 (795)
T ss_dssp TTCEEEEEE--TTTEEEEEEESSCCCTTCSEEEEECSSSSEEEEECCTTTTCCCCBCCCGGGTTCSSSTTCSCCSHHHHH
T ss_pred cCCEEEEEC--CCCceEEEEEEeeccCCCceEEEEECCCCEEEEeccCcccccccccCcchhccccchhhhhcccHHHHH
Confidence 478999998 678898886542 111 1 0 0 00 0 112 23345789999999999999999
Q ss_pred HHHHHHh-hcCcccccccCeEEEecCCCCCCCCC
Q psy4957 110 ENLRARF-NAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 110 ~~L~~Rf-~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
++|+.|| ..+.||||+|++|||||||+.+|||+
T Consensus 87 ~nL~~Ry~~~~~IYTy~G~iLiavNPyk~l~iY~ 120 (795)
T 1w7j_A 87 HNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG 120 (795)
T ss_dssp HHHHHHHHHHCCCEEEETTEEEEECCSSCCSCCS
T ss_pred HHHHHHHHhcccchhccCcceEEecCccccCcCC
Confidence 9999999 99999999999999999999999997
No 4
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.63 E-value=1.1e-16 Score=149.54 Aligned_cols=89 Identities=24% Similarity=0.403 Sum_probs=69.9
Q ss_pred ccceEeeecccCCccccCCcccC--chhh--h----h---hh----hcccCCCCCCCCCCcCCCCCCChHHHHHHHHHHh
Q psy4957 52 RDFLFYLREKLNDNIWADGFNID--PELI--R----D---YF----YRFLYQPQDREYPDLCQLPDLNETTLLENLRARF 116 (143)
Q Consensus 52 ~~~r~~l~~~~~~~~w~~~~~~~--~~~~--~----~---~~----~~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf 116 (143)
.|.++|+++ ++..|+.|.+.. +..+ . + .+ .....+|...+++||+.|++|||++||+||+.||
T Consensus 30 ~~~~vw~~~--~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~~~n~~~~~~~~Dl~~l~~l~e~~vl~~L~~Ry 107 (1184)
T 1i84_S 30 AKKLVWVPS--EKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLRERY 107 (1184)
T ss_dssp CTTEEEECC--TTTSSEEEEEEEEETTEEEEEETTTCCEEEEETTSCEECCCGGGTTCSBTTSSSCCCTTHHHHHHHHHH
T ss_pred cCCeEEEEC--CCCCeEEEEEEEecCCeEEEEEcCCCcEEEeeHHHccCCCCccccccchhhhhccccHHHHHHHHHHHh
Confidence 468899998 667798886441 1111 0 0 00 1122445567999999999999999999999999
Q ss_pred hcCcccccccCeEEEecCCCCCCCCC
Q psy4957 117 NAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 117 ~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
..+.||||+|+||||||||+.+|||+
T Consensus 108 ~~~~iyT~~g~~li~vNP~~~l~~y~ 133 (1184)
T 1i84_S 108 FSGLIYTYSGLFCVVINPYKQLPIYS 133 (1184)
T ss_dssp HHTCCEEEETTEEEEECCCSCCSCCS
T ss_pred cCCCcEEecCcceeeeCCCcCCCCCC
Confidence 99999999999999999999999997
No 5
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.63 E-value=2.3e-16 Score=146.66 Aligned_cols=89 Identities=25% Similarity=0.446 Sum_probs=69.6
Q ss_pred ccceEeeecccCCccccCCcccC----chh-h--h---h--h-h-h-------ccc-CCCCCCCCCCcCCCCCCChHHHH
Q psy4957 52 RDFLFYLREKLNDNIWADGFNID----PEL-I--R---D--Y-F-Y-------RFL-YQPQDREYPDLCQLPDLNETTLL 109 (143)
Q Consensus 52 ~~~r~~l~~~~~~~~w~~~~~~~----~~~-~--~---~--~-~-~-------~~~-~~~~~~~~~Dl~~L~~l~e~~vl 109 (143)
.|.++|+++ ++.+|+.|++.. +.. + . + . + . +.+ .+|...+++||+.|++|||++||
T Consensus 9 ~g~~vwv~~--~~~~~~~~~v~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~np~~~~~~~Dl~~L~~l~e~~vl 86 (1080)
T 2dfs_A 9 KYARVWIPD--PEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDILVGENDLTALSYLHEPAVL 86 (1080)
T ss_dssp TTCEEEEEE--TTTEEEEEECSSCCCTTCSEEECCCSSSSCCEEECCTTTCCCCCBCCCGGGSSCSBSTTCSSCSHHHHH
T ss_pred cCCEEEEEC--CCCceEEEEEEeeecCCCceEEEEECCCCEEEEecCCcccccccccCcccccchhhhhhhhhcchHHHH
Confidence 478999998 678899886542 111 1 0 0 0 0 0 112 23345789999999999999999
Q ss_pred HHHHHHh-hcCcccccccCeEEEecCCCCCCCCC
Q psy4957 110 ENLRARF-NAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 110 ~~L~~Rf-~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+||+.|| ..+.||||+|++|||||||+.+|||+
T Consensus 87 ~nL~~Ry~~~~~iYTy~G~iLiavNPyk~l~iy~ 120 (1080)
T 2dfs_A 87 HNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG 120 (1080)
T ss_dssp HHHHHHHHTTCCCEEEETTEEEEECCSSCCSCSS
T ss_pred HHHHHHHHhcCCchhccCceeEEecCCcccccCC
Confidence 9999999 99999999999999999999999997
No 6
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=99.62 E-value=2.2e-16 Score=143.72 Aligned_cols=89 Identities=26% Similarity=0.401 Sum_probs=69.5
Q ss_pred ccceEeeecccCCccccCCcccC--chhh--h----h---hh----hcccCCCCCCCCCCcCCCCCCChHHHHHHHHHHh
Q psy4957 52 RDFLFYLREKLNDNIWADGFNID--PELI--R----D---YF----YRFLYQPQDREYPDLCQLPDLNETTLLENLRARF 116 (143)
Q Consensus 52 ~~~r~~l~~~~~~~~w~~~~~~~--~~~~--~----~---~~----~~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf 116 (143)
.|.++|+++ ++..|+.|++.. +..+ + + .+ .....+|...+++||+.|++|||++||++|+.||
T Consensus 30 ~~~~vWv~~--~~~~~~~~~v~~~~~~~~~v~~~~~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~l~E~svL~nL~~Ry 107 (837)
T 1kk8_A 30 GKKNCWVPD--EKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEKLEDMANMTYLNEASVLYNLRSRY 107 (837)
T ss_dssp TTTEEEEEE--TTTEEEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECCCGGGTTCSBGGGSSCCSHHHHHHHHHHHH
T ss_pred cCCEEEEEC--CCCCeeEEEEEeecCCeEEEEEcCCCceEEeeHHHccccCchhhcchhhhhhhhcccHHHHHHHHHHHH
Confidence 367899987 667898886441 1110 0 0 00 0122445567999999999999999999999999
Q ss_pred hcCcccccccCeEEEecCCCCCCCCC
Q psy4957 117 NAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 117 ~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
..+.||||+|++|||||||+.+|||+
T Consensus 108 ~~~~IYTy~G~iLiavNPyk~l~iY~ 133 (837)
T 1kk8_A 108 TSGLIYTYSGLFCIAVNPYRRLPIYT 133 (837)
T ss_dssp HTTCCEEEETTEEEEECCSSCCSTTS
T ss_pred hcCCceeeccceeEEeCCCcCCCCCC
Confidence 99999999999999999999999997
No 7
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=99.62 E-value=2.7e-16 Score=142.02 Aligned_cols=91 Identities=26% Similarity=0.369 Sum_probs=69.4
Q ss_pred ccceEeeeccc-CCccccCCcccC--chhh--h-----h-hh----hcccCCCCCCCCCCcCCCCCCChHHHHHHHHHHh
Q psy4957 52 RDFLFYLREKL-NDNIWADGFNID--PELI--R-----D-YF----YRFLYQPQDREYPDLCQLPDLNETTLLENLRARF 116 (143)
Q Consensus 52 ~~~r~~l~~~~-~~~~w~~~~~~~--~~~~--~-----~-~~----~~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf 116 (143)
.|.++|+++.. .+..|+.|++.. +..+ + . .+ .....+|...+++||+.|++|||++||++|+.||
T Consensus 31 ~~~~vWv~~~~~~~~~~~~~~v~~~~~~~~~v~~~~g~~~~v~~~~v~~~np~~~~~~~Dl~~L~~l~E~svL~nL~~Ry 110 (770)
T 1w9i_A 31 DKRYIWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNLRVRY 110 (770)
T ss_dssp -CCEEEECSSTTCTTCCEEEEEEEECSSEEEEECTTSCEEEEETTTCEECCCGGGTTCSBGGGCSCCCHHHHHHHHHHHH
T ss_pred CCCEEEeeCCcccccCceEEEEEEecCCeEEeecCCCcEEEEchHhccccCcccccchhhhhhhccCCHHHHHHHHHHHH
Confidence 57889999831 156798886441 1111 0 0 00 0122445567899999999999999999999999
Q ss_pred hcCcccccccCeEEEecCCCCCCCCC
Q psy4957 117 NAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 117 ~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
..+.||||+|++|||||||+.+|||+
T Consensus 111 ~~~~IYTy~G~iLvavNPyk~l~iY~ 136 (770)
T 1w9i_A 111 NQDLIYTYSGLFLVAVNPFKRIPIYT 136 (770)
T ss_dssp HTTCCEEEETTEEEEECCSSCCSCCS
T ss_pred hcCCceeccCceeEEecCCccccCCC
Confidence 99999999999999999999999997
No 8
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.62 E-value=2.7e-16 Score=145.24 Aligned_cols=88 Identities=26% Similarity=0.391 Sum_probs=68.4
Q ss_pred cceEeeecccCCccccCCcccC--chhhh------h---hh----hcccCCCCCCCCCCcCCCCCCChHHHHHHHHHHhh
Q psy4957 53 DFLFYLREKLNDNIWADGFNID--PELIR------D---YF----YRFLYQPQDREYPDLCQLPDLNETTLLENLRARFN 117 (143)
Q Consensus 53 ~~r~~l~~~~~~~~w~~~~~~~--~~~~~------~---~~----~~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~ 117 (143)
|.++|+++ ++..|+.|.+.. +..+. + .+ .....+|...+++||+.|++|||++||+||+.||.
T Consensus 8 ~~~vwv~~--~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~v~~~~~~~~np~~~~~~~Dl~~L~~l~e~~vl~nL~~Ry~ 85 (995)
T 2ycu_A 8 RRLVWVPS--ELHGFEAAALRDEGEEEAEVELAESGRRLRLPRDQIQRMNPPKFSKAEDMAELTCLNEASVLHNLRERYY 85 (995)
T ss_dssp GCEEEEEE--TTTEEEEEEEEEECSSEEEEEETTTCCEEEEEGGGCEECCCGGGTTCSBGGGCSSCSHHHHHHHHHHHHH
T ss_pred CCeEEEEC--CCCceEEEEEEEecCCeEEEEECCCCeEEEeeHHHcccCCCccccccchhhhhccccHHHHHHHHHHHHh
Confidence 56799987 567788875441 11100 0 00 11224455689999999999999999999999999
Q ss_pred cCcccccccCeEEEecCCCCCCCCC
Q psy4957 118 AGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 118 ~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
.+.||||+|++|||||||+.+|||+
T Consensus 86 ~~~iYTy~G~ilvavNPyk~l~iy~ 110 (995)
T 2ycu_A 86 SGLIYTYSGLFCVVINPYKQLPIYT 110 (995)
T ss_dssp TTCCEEEETTEEEEECCSSCCSCCS
T ss_pred cCceeeecCceeeeeCCccccCCCC
Confidence 9999999999999999999999997
No 9
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=99.59 E-value=7.6e-16 Score=139.35 Aligned_cols=56 Identities=41% Similarity=0.635 Sum_probs=52.2
Q ss_pred CCCCCCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCC-CCCC
Q psy4957 87 YQPQDREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLF-FCED 142 (143)
Q Consensus 87 ~~~~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~l-piY~ 142 (143)
.+|...+++||+.|++|||++||++|+.||..+.||||+|++|||||||+.+ |||+
T Consensus 48 ~~~~~~~~~Dl~~L~~L~E~svL~nL~~Ry~~~~IYTy~G~iLiaVNPyk~l~~iY~ 104 (784)
T 2v26_A 48 EEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYS 104 (784)
T ss_dssp CSCSSCCCSBGGGSSSCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCTTTTS
T ss_pred ccccccccchhhhhhhccHHHHHHHHHHHHhcCceeeeccceEEEecCCcCcCCCCC
Confidence 3445679999999999999999999999999999999999999999999999 5997
No 10
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.59 E-value=5.8e-16 Score=143.18 Aligned_cols=89 Identities=27% Similarity=0.377 Sum_probs=68.5
Q ss_pred ccceEe---eecccCCccccCCcccC--chhh--h-----h-hh----hcccCCCCCCCCCCcCCCCCCChHHHHHHHHH
Q psy4957 52 RDFLFY---LREKLNDNIWADGFNID--PELI--R-----D-YF----YRFLYQPQDREYPDLCQLPDLNETTLLENLRA 114 (143)
Q Consensus 52 ~~~r~~---l~~~~~~~~w~~~~~~~--~~~~--~-----~-~~----~~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~ 114 (143)
.|.++| +.+ ++..|+.|.+.. +..+ + . .+ .....+|...+++||+.|++|||++||++|+.
T Consensus 31 ~~~~vW~~~v~~--~~~~~~~~~v~~~~~~~~~v~~~~g~~~~v~~~~~~~~np~~~~~~~Dl~~L~~l~e~~vl~nL~~ 108 (1010)
T 1g8x_A 31 DKRYIWYNPDPD--ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNLRV 108 (1010)
T ss_dssp CCCEEEECSSTT--CTTCCEEEEEEEEETTEEEEECSSSSEEEEETTTCCBCCCGGGTTCSBGGGCSSCCHHHHHHHHHH
T ss_pred cCCceeCccCcC--cccCeeEEEEEEecCCeEEEEecCCcEEEecHHhccccCcchhcchhhhhhhhcccHHHHHHHHHH
Confidence 367899 776 567788885441 1110 0 0 01 01124445678999999999999999999999
Q ss_pred HhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 115 RFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 115 Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
||..+.||||+|++|||||||+.+|||+
T Consensus 109 Ry~~~~iYTy~G~ilvavNPyk~l~iy~ 136 (1010)
T 1g8x_A 109 RYNQDLIYTYSGLFLVAVNPFKRIPIYT 136 (1010)
T ss_dssp HHTTTCCEEEETTEEEEECCSSCCSCCS
T ss_pred HHhhCCceeccCceeEEecCCccccCCC
Confidence 9999999999999999999999999997
No 11
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=99.48 E-value=1.9e-14 Score=128.87 Aligned_cols=53 Identities=34% Similarity=0.654 Sum_probs=49.2
Q ss_pred CCCCCCCcCCCCCCChHHHHHHHHHHhhcCcccccccCeEEEecCCCCCCCCC
Q psy4957 90 QDREYPDLCQLPDLNETTLLENLRARFNAGHIYTYVGSILIAVNPFKLFFCED 142 (143)
Q Consensus 90 ~~~~~~Dl~~L~~l~e~~vl~~L~~Rf~~~~IYTy~G~iLvaVNPyk~lpiY~ 142 (143)
+..+++||+.|++|||++||++|+.||..+.||||+|++|||||||+.+|||+
T Consensus 6 ~~~~~~Dl~~L~~l~E~~vl~nL~~Ry~~~~IYTy~G~iLiavNPyk~l~iY~ 58 (697)
T 1lkx_A 6 KAEGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYK 58 (697)
T ss_dssp ---CCSSGGGCSSCSHHHHHHHHHHHHHTTCCEEESSSCEEEECCSSCCSCCS
T ss_pred cccCCcccccCCCCCHHHHHHHHHHHHhcCCcEEeeCCeEEEEcCCcCCCCCC
Confidence 34589999999999999999999999999999999999999999999999996
Done!