BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy496
(319 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 249 bits (636), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 226 TVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCG 285
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSDP LS VSHIV+DEIHER++ SD
Sbjct: 286 -SGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSD 344
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ + R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LEDV+
Sbjct: 345 VLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEK 404
Query: 252 TR 253
R
Sbjct: 405 IR 406
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 244 bits (623), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/182 (63%), Positives = 144/182 (79%), Gaps = 1/182 (0%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 219 TVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVATERAESCG 278
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSD LS VSHIV+DEIHER++ SD
Sbjct: 279 N-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSD 337
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LED++
Sbjct: 338 VLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 397
Query: 252 TR 253
R
Sbjct: 398 IR 399
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle
PE=2 SV=2
Length = 1293
Score = 201 bits (510), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 131/180 (72%), Gaps = 5/180 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQ+ Q+ILDD I +G I VTQPRRISAI++AERVA+ER EQ G
Sbjct: 404 IIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLG- 462
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+VGY +R E PR G+IL+CT G+L +++ L GVSHI++DEIHER + SDF
Sbjct: 463 --DTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEAG--LRGVSHIIVDEIHERDVNSDF 518
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL IL+D+ D DL +ILMSAT++ KFS++FG P+L +PG +PVQ+++LED++ MT
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQ+ Q+ILDD I +G I VTQPRRISAI++ +
Sbjct: 410 GCGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAER 452
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 201 bits (510), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 131/177 (74%), Gaps = 3/177 (1%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTT++PQ +L+ I RG+ C +++TQPRRISAI++A+RVAQE +
Sbjct: 498 VIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRK 557
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+VGYQ+RLE + P + G++L+CT GIL +Q +P L GVSH+V+DE+HER + +DF
Sbjct: 558 ---NVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDF 614
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LL +LK + DL+L+LMSAT + ++FS +FGG P++ +PGF YPV+EYYLE++L
Sbjct: 615 LLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVPGFMYPVKEYYLEEIL 671
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCL-TLSPILSPSIIY 75
GCGKTT++PQ +L+ I RG+ C +++TQPRRISAI++ + L P + ++ Y
Sbjct: 504 GCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGY 561
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 131/180 (72%), Gaps = 5/180 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++AERVA ER E+
Sbjct: 408 IIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEE--- 464
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG S GY +R E LPR SI++CT G+L +++ + G+SH+++DEIHER + +DF
Sbjct: 465 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDF 522
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV +++++LMSAT++ F ++F PI+ + G TYPVQEY+LED + MT
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 582
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 131/180 (72%), Gaps = 5/180 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++AERVA ER E+
Sbjct: 408 IIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEE--- 464
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG S GY +R E LPR SI++CT G+L +++ + G+SH+++DEIHER + +DF
Sbjct: 465 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDF 522
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV +++++LMSAT++ F ++F PI+ + G TYPVQEY+LED + MT
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 582
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 199 bits (505), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 131/180 (72%), Gaps = 5/180 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++AERVA ER E+
Sbjct: 405 IIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEE--- 461
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG S GY +R E LPR SI++CT G+L +++ + G+SH+++DEIHER + +DF
Sbjct: 462 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDF 519
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV +++++LMSAT++ F ++F PI+ + G T+PVQEY+LED + MT
Sbjct: 520 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 579
>sp|Q99PU8|DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30
PE=2 SV=1
Length = 1217
Score = 197 bits (501), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 148/219 (67%), Gaps = 13/219 (5%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + ++ I + P++ +I TGCGKTT++PQ +
Sbjct: 442 ELWRRRGPIWQEAPQLPVDPHRDTILSAIEQ----HPVV---VISGDTGCGKTTRIPQLL 494
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 495 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 551
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 552 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 611
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 612 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 650
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 197 bits (501), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 148/219 (67%), Gaps = 13/219 (5%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + ++ I + P++ +I TGCGKTT++PQ +
Sbjct: 419 ELWRRRGPIWQEAPQLPVDPHRDTILSAIEQ----HPVV---VISGDTGCGKTTRIPQLL 471
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 472 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 528
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 147/219 (67%), Gaps = 13/219 (5%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 419 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VISGDTGCGKTTRIPQLL 471
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 472 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 528
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 147/219 (67%), Gaps = 13/219 (5%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 419 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VISGDTGCGKTTRIPQLL 471
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 472 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPSR 528
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 136/188 (72%), Gaps = 8/188 (4%)
Query: 66 SPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQE 125
SP++ II +TGCGKTTQVPQ+ILD+ I +R ++C I+VTQPRRISA+++AERVA E
Sbjct: 406 SPVV---IIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAERVAFE 462
Query: 126 RDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHE 185
R E+ G+ S GY +R E LPR S+L+CT G+L ++S + G+SH+++DEIHE
Sbjct: 463 RGEEIGK---SCGYSVRFESVLPRPHASMLFCTVGVLLRKLESG--IRGISHVIVDEIHE 517
Query: 186 RSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYL 245
R + +DFLL +L+DV ++++ILMSAT++ F ++F PI+ + G T+PVQEYYL
Sbjct: 518 RDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYL 577
Query: 246 EDVLNMTR 253
ED + MT+
Sbjct: 578 EDCIQMTQ 585
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30
PE=2 SV=1
Length = 1220
Score = 194 bits (493), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 146/219 (66%), Gaps = 13/219 (5%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 445 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VIAGDTGCGKTTRIPQLL 497
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 498 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPTLRR---NVGFQVRLESKPPAR 554
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+V+DE HER + +DFLL +LK + L+L+
Sbjct: 555 GGALLFCTVGILLRKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLV 614
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 615 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 653
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 128/181 (70%), Gaps = 4/181 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTTQ+PQFILDD + I+ TQPRRISAI++AERVA+ER E R
Sbjct: 564 VISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAE---R 620
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L GVSHI++DE+HER+ SDF
Sbjct: 621 VGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDF 679
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R L++ILMSATLNAE FS +F P++ IPG T+PV +++LED + +T
Sbjct: 680 LLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVT 739
Query: 253 R 253
R
Sbjct: 740 R 740
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 184 bits (468), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 132/181 (72%), Gaps = 5/181 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQ+ILDD I +R +EC I+VTQPRRISA+A+AERVA ER E+
Sbjct: 410 IIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEE--- 466
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG S GY +R E LPR SI++CT G+L +++ + G+SH+++DEIHER + +DF
Sbjct: 467 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDF 524
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV +++++LMSAT++ F ++F PI+ + G T+PVQEY+LED + MT
Sbjct: 525 LLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 584
Query: 253 R 253
+
Sbjct: 585 Q 585
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 4/181 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTTQ+PQFILD+ + I+ TQPRRISAI++AERVA+ER E R
Sbjct: 565 VISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAE---R 621
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L GV+HI++DE+HER+ SDF
Sbjct: 622 VGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDF 680
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R L++ILMSATL+A FS++F P++ IPG +PV +++LED L +T
Sbjct: 681 LLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVT 740
Query: 253 R 253
R
Sbjct: 741 R 741
>sp|P0C7L7|YUM14_USTMA Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=UM04112 PE=3 SV=1
Length = 1567
Score = 174 bits (442), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 131/188 (69%), Gaps = 9/188 (4%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQC-G 131
II TGCGKTTQVPQFILD+ I RGSEC I+VTQPRR+SAI +A RVA ER E+ G
Sbjct: 756 IIAGETGCGKTTQVPQFILDEAIEAGRGSECNIVVTQPRRVSAIGVASRVAVERGEKLDG 815
Query: 132 R-----PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQS--DPILSGVSHIVMDEIH 184
+ PGS VGY IR E+ R+ +L+ T G+L + + D L G+SH+V+DE+H
Sbjct: 816 KKKAVAPGSLVGYAIRGERRASRE-CRLLFTTTGVLLRRLGAGGDTDLKGISHVVVDEVH 874
Query: 185 ERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
ER++ SDFLL L+++ + +K++LMSAT+N E F+ +FG AP + IPG T+ V+++Y
Sbjct: 875 ERNVDSDFLLLELRELLRRNSRIKVVLMSATINQETFASYFGKAPCISIPGRTFAVEDHY 934
Query: 245 LEDVLNMT 252
LED++ +
Sbjct: 935 LEDIVQQS 942
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQFILD+ I RGSEC I+VTQPRR+SAI + ++
Sbjct: 762 GCGKTTQVPQFILDEAIEAGRGSECNIVVTQPRRVSAIGVASR 804
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 36/46 (78%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
+K++LMSAT+N E F+ +FG AP + IPG T+ V+++YLED++ +
Sbjct: 897 IKVVLMSATINQETFASYFGKAPCISIPGRTFAVEDHYLEDIVQQS 942
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 125/183 (68%), Gaps = 4/183 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARN-RGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + S+C I+ TQPRRISA+++A RV E + G
Sbjct: 592 VVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENG 651
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E + +LYCT G+L +Q D +LS VSH+++DE+HERS+
Sbjct: 652 PGGRNSLCGYQIRMESRAC-ESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQ 710
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++
Sbjct: 711 SDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
Query: 250 NMT 252
T
Sbjct: 771 EET 773
>sp|Q22307|DHX9_CAEEL Probable ATP-dependent RNA helicase A OS=Caenorhabditis elegans
GN=rha-1 PE=2 SV=3
Length = 1301
Score = 171 bits (433), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 128/185 (69%), Gaps = 11/185 (5%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGK+TQV QF+L+ + + G+ +V+QPRRISAI++AERVA ER E+ G
Sbjct: 400 TLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVG 459
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ GY +R + PR GSI++CT G+L +M++ L G+SH+++DEIHER + +D
Sbjct: 460 E---TCGYNVRFDSATPRPYGSIMFCTVGVLLRMMENG--LRGISHVIIDEIHERDVDTD 514
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF------GGAPILHIPGFTYPVQEYYL 245
F+L +L+++ +DL+++LMSAT++ + F+ FF G P++ + G T+PVQ +YL
Sbjct: 515 FVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYL 574
Query: 246 EDVLN 250
ED+L+
Sbjct: 575 EDILH 579
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2
SV=1
Length = 1362
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 126/184 (68%), Gaps = 6/184 (3%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGS--ECCIMVTQPRRISAIAIAERVAQER--DE 128
++ TG GK+TQVPQF+L+D + N GS +C I+ TQPRRISA+++A RV +E D
Sbjct: 586 VVAGETGSGKSTQVPQFLLED-LLFNGGSPGKCNIVCTQPRRISAMSLATRVCEELGCDS 644
Query: 129 QCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSM 188
G S GYQIR+E + +LYCT GIL +Q D +L +SHI++DE+HER++
Sbjct: 645 GPGGKNSLCGYQIRMESRTG-EATRLLYCTTGILLRKLQEDSMLKNISHIIVDEVHERTV 703
Query: 189 ISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDV 248
SDFLL IL+++ KR DL L+LMSAT++ EKFS +F PI+ I G T+PV+ ++LEDV
Sbjct: 704 QSDFLLIILREILHKRSDLHLVLMSATVDCEKFSSYFTHCPIIRISGRTFPVEVFHLEDV 763
Query: 249 LNMT 252
+ T
Sbjct: 764 VEAT 767
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 164 bits (415), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 127/183 (69%), Gaps = 4/183 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGS-ECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + G+ +C I+ TQPRRISA+++A RV +E + G
Sbjct: 591 VVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESG 650
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E + +LYCT G+L +Q D +L+ VSH+++DE+HERS+
Sbjct: 651 PGGRNSLCGYQIRMESR-ASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQ 709
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT++++KFS +F PIL I G +YPV+ ++LED++
Sbjct: 710 SDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIV 769
Query: 250 NMT 252
T
Sbjct: 770 EET 772
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens
GN=YTHDC2 PE=1 SV=2
Length = 1430
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 117/181 (64%), Gaps = 7/181 (3%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD G C I TQPRR++AIA+AERVA ER E R
Sbjct: 213 LIVGETGSGKTTQIPQFLLDD--CFKNGIPCRIFCTQPRRLAAIAVAERVAAERRE---R 267
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
G ++GYQIRLE + K + +CT G+L +M D LS V+H+++DE+HER SD
Sbjct: 268 IGQTIGYQIRLESRVSPK-TLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSD 326
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL L+D+ K LKLIL SA L+ F ++FG P+++I G + V+E +LED+L
Sbjct: 327 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRT 386
Query: 252 T 252
T
Sbjct: 387 T 387
>sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus
GN=Ythdc2 PE=2 SV=1
Length = 1445
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 117/181 (64%), Gaps = 7/181 (3%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD G C I TQPRR++AIA+AERVA ER E R
Sbjct: 228 LIVGETGSGKTTQIPQFLLDD--CFKNGIPCRIFCTQPRRLAAIAVAERVAAERRE---R 282
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
G ++GYQIRLE + K + +CT G+L +M D LS V+H+++DE+HER SD
Sbjct: 283 IGQTIGYQIRLESRVSPK-TLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSD 341
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL L+D+ K LKLIL SA L+ F ++FG P+++I G + V+E +LED+L
Sbjct: 342 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRT 401
Query: 252 T 252
T
Sbjct: 402 T 402
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 113/177 (63%), Gaps = 6/177 (3%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARN--RGSECCIMVTQPRRISAIAIAERVAQERDEQC 130
I+ TG GKTTQ+PQF+LD +A N +G + + TQPRR++A++++ RVA E D
Sbjct: 85 ILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSI 144
Query: 131 GRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMIS 190
G VGY IR E + R + Y T G+L +DP+L I++DE HER++ +
Sbjct: 145 G---EEVGYSIRFE-DCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLAT 200
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
D L +LK+V R DLKL++MSATL AEKF ++F GAP++ +PG +PV+ +Y ++
Sbjct: 201 DVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQE 257
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 19 GCGKTTQVPQFILDDEIARN--RGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQF+LD +A N +G + + TQPRR++A+++
Sbjct: 91 GSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSV 132
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 114/176 (64%), Gaps = 7/176 (3%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+PQF++D + R + VTQPRR++AI++A+RV++E D + G
Sbjct: 97 ILVGETGSGKTTQIPQFVVDAGLIR---PGKMVGVTQPRRVAAISVAKRVSEEMDFELG- 152
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E EL R + Y T G+L SDP L+ I++DE HER++ +D
Sbjct: 153 --EEVGYSIRFE-ELSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDI 209
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDV 248
L ++KD+ +RKDLKLI+MSATL A KF ++F AP++ +PG +PV+ +Y E+
Sbjct: 210 LFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEA 265
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKC 62
G GKTTQ+PQF++D + R + VTQPRR++AI++ +
Sbjct: 103 GSGKTTQIPQFVVDAGLIR---PGKMVGVTQPRRVAAISVAKRV 143
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 114/173 (65%), Gaps = 8/173 (4%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+ TG GKTTQ+PQF+L DE+ ++ + TQPRR++A+++A+RVA+E D + G
Sbjct: 113 VFVGETGSGKTTQIPQFVLFDEMPHLENTQ--VACTQPRRVAAMSVAQRVAEEMDVKLG- 169
Query: 133 PGSSVGYQIRLEKELPRKRGSIL-YCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
VGY IR E + K +IL Y T G+L D LS S I++DE HER++ +D
Sbjct: 170 --EEVGYSIRFENKTSNK--TILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATD 225
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK V +R DLK+I+MSATL+AEKF ++F AP+L +PG TYPV+ YY
Sbjct: 226 ILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYY 278
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKC 62
G GKTTQ+PQF+L DE+ ++ + TQPRR++A+++ +
Sbjct: 119 GSGKTTQIPQFVLFDEMPHLENTQ--VACTQPRRVAAMSVAQRV 160
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 116/177 (65%), Gaps = 6/177 (3%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GK+TQV QFILD ++ ++ TQPRRISAI++AERVA ERD G+
Sbjct: 597 VISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGK 656
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPI--LSGVSHIVMDEIHERSMIS 190
VGY + EK + K + +CT G+L +Q + LS +S +V+DE+HERS+ +
Sbjct: 657 ---EVGYSVHGEKSIS-KETLLEFCTTGLLLRRIQQHGLGFLSTLSCVVVDEVHERSIEN 712
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
D LL +LK V + +LK+ILMSAT+N++ F +FG A LHI G T+P+++YY+ED
Sbjct: 713 DILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYIED 769
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GK+TQV QFILD ++ ++ TQPRRISAI+L
Sbjct: 603 GSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAISL 642
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 147 bits (372), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 113/172 (65%), Gaps = 8/172 (4%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GK+TQ+PQF+ + A+ E C+ +TQPRR++A+ +A+RVA E Q R
Sbjct: 116 VVVGETGSGKSTQIPQFLNECPYAQ----EGCVAITQPRRVAAVNLAKRVAAE---QGCR 168
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR + + K+ I Y T G+L + +DPILS +++DE HER++++D
Sbjct: 169 LGEQVGYSIRFD-DTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDM 227
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LL +K + KR L++I+MSATLNAE+FS+FF GA I +I G YPVQ +Y
Sbjct: 228 LLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHY 279
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ+PQF+ + A+ E C+ +TQPRR++A+ L +
Sbjct: 122 GSGKSTQIPQFLNECPYAQ----EGCVAITQPRRVAAVNLAKR 160
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 113/175 (64%), Gaps = 6/175 (3%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+ TG GKTTQ+PQF+L DE+ ++ I TQPRR++A+++A+RVA E D G
Sbjct: 95 VFVGETGSGKTTQIPQFVLYDELPHLTNTQ--IACTQPRRVAAMSVAKRVADEMDVDLG- 151
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + + Y T G+L +D +LS S I++DE HER++ +D
Sbjct: 152 --EEVGYNIRFE-DCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDI 208
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L+ ++K + +R DLK+I+MSATL+A+KF ++F AP+L +PG TYPV+ YY ++
Sbjct: 209 LMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQE 263
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 111/170 (65%), Gaps = 12/170 (7%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ QF+ +D RN I TQPRR++A+++A+RV++E R
Sbjct: 512 IVVGETGSGKTTQLAQFLYEDGYHRN----GMIGCTQPRRVAAMSVAKRVSEE---MGVR 564
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGIL--PEVMQSDPILSGVSHIVMDEIHERSMIS 190
GS+VGY IR E ++ I Y T G+L +MQ++ L S I+MDE HERS+ +
Sbjct: 565 LGSTVGYSIRFE-DVTGPDTVIKYMTDGVLLRESLMQNN--LEKYSVIIMDEAHERSLNT 621
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 240
D L+ +LK V +R+D+KL++ SAT+N++KFS FFGGAP IPG TYPV
Sbjct: 622 DILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPV 671
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKC 62
G GKTTQ+ QF+ +D RN I TQPRR++A+++ +
Sbjct: 518 GSGKTTQLAQFLYEDGYHRN----GMIGCTQPRRVAAMSVAKRV 557
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 106/172 (61%), Gaps = 5/172 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+ Q++ ++ A +RG I+VTQPRR++AI++A+RVA E G+
Sbjct: 370 VIIGETGSGKTTQLAQYLYEEGYANDRGK--SIVVTQPRRVAAISVAKRVAMEMQVPLGK 427
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + + + T GIL D L S +++DE HERS+ +D
Sbjct: 428 ---EVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDI 484
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LL K + +R+DLKLI+ SAT+NA+KFS FFG AP IPG T+PVQ Y
Sbjct: 485 LLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIY 536
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKC 62
G GKTTQ+ Q++ ++ A +RG I+VTQPRR++AI++ +
Sbjct: 376 GSGKTTQLAQYLYEEGYANDRGK--SIVVTQPRRVAAISVAKRV 417
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+ + + CC TQPRR++A+++A RVA+E D R
Sbjct: 438 LIVAETGSGKTTQLPQFLHEAGYTKGNKKICC---TQPRRVAAMSVAARVAKEMD---VR 491
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E K I Y T G+L ++P L+ S I++DE HER++ +D
Sbjct: 492 LGQEVGYSIRFENATSEK-TVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDI 550
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KD+ R DLK+++ SAT++AEKFS +F AP+ ++PG YPV YY
Sbjct: 551 LFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYY 602
Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQF+ + + CC TQPRR++A+++
Sbjct: 444 GSGKTTQLPQFLHEAGYTKGNKKICC---TQPRRVAAMSV 480
>sp|O60114|YG65_SCHPO Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15C4.05 PE=3 SV=1
Length = 1428
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 116/188 (61%), Gaps = 11/188 (5%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TGCGK+TQ+P F+L++ + G I VT+PRRISAI++A RV+QE G
Sbjct: 651 IISGDTGCGKSTQIPAFLLEN--STKNGKAVKIYVTEPRRISAISLANRVSQELG---GN 705
Query: 133 PGSS-----VGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERS 187
P S+ VGY +RL+ + + Y T G +++ + V+H+++DE+HERS
Sbjct: 706 PPSARSHELVGYSVRLDSKCT-PLTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERS 764
Query: 188 MISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
+ SD LL + + + LK+I+MSATLNAEKF +F G+ ++ IPG TYPV +YLED
Sbjct: 765 IDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLED 824
Query: 248 VLNMTRKD 255
+L+ D
Sbjct: 825 ILSQFGND 832
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 299
LK+I+MSATLNAEKF +F G+ ++ IPG TYPV +YLED+L+
Sbjct: 784 LKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLEDILS 827
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKC 62
GCGK+TQ+P F+L++ + G I VT+PRRISAI+L N+
Sbjct: 657 GCGKSTQIPAFLLEN--STKNGKAVKIYVTEPRRISAISLANRV 698
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 111/172 (64%), Gaps = 5/172 (2%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++++D ++G + I +TQPRR++A ++A RVA E + G+
Sbjct: 243 IIMGETGSGKTTQLPQYLVEDGFT-DQG-KLQIAITQPRRVAATSVAARVADEMNVVLGK 300
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGYQIR E + + + Y T G+L +D LS S I++DE HER++ +D
Sbjct: 301 ---EVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDI 357
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LKD+ +R LKL++ SAT+NA+KFS+FF PI ++PG YPV +Y
Sbjct: 358 LIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHY 409
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 18 AGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQ++++D ++G + I +TQPRR++A ++
Sbjct: 248 TGSGKTTQLPQYLVEDGFT-DQG-KLQIAITQPRRVAATSV 286
>sp|B4NBB0|SPNE_DROWI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
willistoni GN=spn-E PE=3 SV=1
Length = 1432
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 121/189 (64%), Gaps = 11/189 (5%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TGCGKTTQVPQ+I+D E +NR C I+VTQPRRI+AI+IA RV+QER +
Sbjct: 135 ILKGETGCGKTTQVPQYIID-EAYQNR-QYCNIVVTQPRRIAAISIANRVSQERHWE--- 189
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG+ YQ+ L ++ + +LYCT G+L + + L+ +HIV+DE+HER DF
Sbjct: 190 PGTVCSYQVGLHRQSGSEDARLLYCTTGVLLNFLINHKTLTHYTHIVLDEVHERDQEMDF 249
Query: 193 LLAILKD-VTDKRKDLKLILMSATLNAEKFSQFF----GGAPILHIP-GFTYPVQEYYLE 246
LL +++ + + +K+ILMSAT+++ +F Q+F G P+++ G YP+ ++Y +
Sbjct: 250 LLIVVRRLLATNSRHVKVILMSATIDSREFVQYFATKNGIPPVINASHGRKYPLVKFYRD 309
Query: 247 DVLNMTRKD 255
+ NM ++
Sbjct: 310 QLKNMQWQE 318
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQ+I+ DE +NR C I+VTQPRRI+AI++ N+
Sbjct: 141 GCGKTTQVPQYII-DEAYQNR-QYCNIVVTQPRRIAAISIANR 181
>sp|B4LX81|SPNE_DROVI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila virilis
GN=spn-E PE=3 SV=1
Length = 1433
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 124/203 (61%), Gaps = 14/203 (6%)
Query: 59 INKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAI 118
I K + +P++ I+ TGCGKTTQVPQ+ILD+ A R C I+VTQPRRI+AI+I
Sbjct: 126 IMKAIRENPVV---ILKGETGCGKTTQVPQYILDE--ACKRREFCNIVVTQPRRIAAISI 180
Query: 119 AERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHI 178
A RV QER Q PG+ YQ+ L ++ + +LYCT G+L + L+ +HI
Sbjct: 181 ANRVCQERQWQ---PGTVCSYQVGLHRQSNVEDTRLLYCTTGVLLNNLIRLKTLTHYTHI 237
Query: 179 VMDEIHERSMISDFLLAILKDVTD-KRKDLKLILMSATLNAEKFSQFFGGA----PILHI 233
V+DE+HER DFLL +++ + + +K+ILMSAT++ +FS++F + P++
Sbjct: 238 VLDEVHERDQDMDFLLIVVRRLLALNSRHVKVILMSATIDTREFSKYFATSSAFPPVVTA 297
Query: 234 P-GFTYPVQEYYLEDVLNMTRKD 255
G YP+ +YY + + N+ KD
Sbjct: 298 SHGRKYPLVKYYRDQLKNIHWKD 320
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQ+ILD+ A R C I+VTQPRRI+AI++ N+
Sbjct: 143 GCGKTTQVPQYILDE--ACKRREFCNIVVTQPRRIAAISIANR 183
>sp|Q296Q5|SPNE_DROPS Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
pseudoobscura pseudoobscura GN=spn-E PE=3 SV=2
Length = 1433
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 12/179 (6%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TGCGKTTQVPQ+ILD+ + C I+VTQPRRI+AI+IA RV QER Q
Sbjct: 136 IVKGETGCGKTTQVPQYILDEGFKSKQ--YCNIVVTQPRRIAAISIANRVCQERQWQ--- 190
Query: 133 PGSSVGYQIRLEKELPRKRGS-ILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+ GYQ+ L ++L R + +LYCT G+L ++ ++ L+ +HIV+DE+HER D
Sbjct: 191 RGTVCGYQVGLHRQLERFADTRLLYCTTGVLLNILVNNKTLTHYTHIVLDEVHERGQEMD 250
Query: 192 FLLAILKD-VTDKRKDLKLILMSATLNAEKFSQFFGGA----PILHIP-GFTYPVQEYY 244
FLL +++ + + +K+ILMSAT+N + S +F P++ G + V++YY
Sbjct: 251 FLLIVIRRLLATNSRHVKVILMSATINPRELSDYFANERSAPPVIDASYGRNFTVEKYY 309
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 16/205 (7%)
Query: 56 IALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISA 115
A+ + LT+ S I+ TG GKTTQ+ Q++ +D I TQPRR++A
Sbjct: 535 FAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT----DYGMIGCTQPRRVAA 590
Query: 116 IAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGV 175
+++A+RV++E G G VGY IR E + + I Y T GIL + L
Sbjct: 591 MSVAKRVSEE---MGGNLGEEVGYAIRFE-DCTSESTLIKYMTDGILLRESLREADLDHY 646
Query: 176 SHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPG 235
S I+MDE HERS+ +D L +L++V +R DLKLI+ SAT++AEKF+ FFG PI HIPG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPG 706
Query: 236 FTYPV--------QEYYLEDVLNMT 252
T+PV QE Y+E + +
Sbjct: 707 RTFPVDILFSKTPQEDYVEAAVKQS 731
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 118/205 (57%), Gaps = 16/205 (7%)
Query: 56 IALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISA 115
A+ + LT+ S I+ TG GKTTQ+ Q++ +D + G C TQPRR++A
Sbjct: 535 FAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGC---TQPRRVAA 590
Query: 116 IAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGV 175
+++A+RV++E G G VGY IR E + + I Y T GIL + L
Sbjct: 591 MSVAKRVSEE---MGGNLGEEVGYAIRFE-DCTSENTLIKYMTDGILLRESLREADLDHY 646
Query: 176 SHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPG 235
S I+MDE HERS+ +D L +L++V +R DLKLI+ SAT++AEKF+ FFG PI HIPG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPG 706
Query: 236 FTYPV--------QEYYLEDVLNMT 252
T+PV QE Y+E + +
Sbjct: 707 RTFPVDILFSKTPQEDYVEAAVKQS 731
>sp|Q7QCW2|SPNE_ANOGA Probable ATP-dependent RNA helicase spindle-E OS=Anopheles gambiae
GN=spn-E PE=3 SV=5
Length = 1463
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 124/198 (62%), Gaps = 17/198 (8%)
Query: 59 INKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAI 118
I K + +P++ ++ TGCGKTTQVPQ++L+D A NR C I+VTQPR+I+A +I
Sbjct: 130 ILKAIRENPVV---VLQGMTGCGKTTQVPQYLLED--AYNRKEWCNIVVTQPRKIAASSI 184
Query: 119 AERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHI 178
A RVA+ER+ C GS VG+++ L KE+ + + Y T G+L + + +S +HI
Sbjct: 185 ARRVAEERN--CAL-GSLVGFKVGL-KEMVSEDTRLTYVTTGVLLNKLITSKSISSYTHI 240
Query: 179 VMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG-------GAPIL 231
++DE+HER + DFLL I++ + ++ K+ILMSAT+ + +F+Q+F AP L
Sbjct: 241 ILDEVHEREVDMDFLLIIVRRLLATMRNTKIILMSATIESSEFAQYFKIPGPNSLFAPQL 300
Query: 232 HIPGFT-YPVQEYYLEDV 248
+ T + V YYLED+
Sbjct: 301 AVSNVTQHDVSVYYLEDL 318
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKC 62
+ + GCGKTTQVPQ++L+D A NR C I+VTQPR+I+A ++ +
Sbjct: 143 QGMTGCGKTTQVPQYLLED--AYNRKEWCNIVVTQPRKIAASSIARRV 188
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+ Q++L+D G I TQPRR++A+++A RVA DE
Sbjct: 461 IIVGETGSGKTTQLAQYLLEDGF----GDSGLIGCTQPRRVAAMSVARRVA---DEMGVD 513
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + ++ I Y T GIL D L S I+MDE HERS+ +D
Sbjct: 514 LGQDVGYAIRFE-DCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDV 572
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGA-PILHIPGFTYPVQEYY 244
L +L++V KR DLKLI+ SAT++A+KF+ FFGG P IPG T+PV+ ++
Sbjct: 573 LFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFH 625
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++L+D G I TQPRR++A+++ +
Sbjct: 467 GSGKTTQLAQYLLEDGF----GDSGLIGCTQPRRVAAMSVARR 505
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ + C TQPRR++A+++A RVA DE +
Sbjct: 384 IIEGETGSGKTTQLPQYLYEAGFCEGGKRIGC---TQPRRVAAMSVAARVA---DEVGCK 437
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G+ VGY IR E + ++ + Y T G+L ++P L+ S +++DE HER++ +D
Sbjct: 438 LGTQVGYSIRFE-DCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDI 496
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KD+ RKDLKL++ SATL+AEKFS FF API IPG +PV YY
Sbjct: 497 LFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYY 548
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 117/181 (64%), Gaps = 9/181 (4%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGS--ECCIMVTQPRRISAIAIAERVAQERDEQC 130
+I TG GK+TQV QFILD + + +G + I+ TQPRRISAI +AERV+ DE+C
Sbjct: 624 LITGETGSGKSTQVVQFILD-FLQKEKGDFGKTKIVCTQPRRISAIGLAERVS---DERC 679
Query: 131 GRPGSSVGYQIR-LEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G VGY IR + K R I + T G+L ++Q+ + + +V+DE+HERS+
Sbjct: 680 VTCGEEVGYVIRGVNKTKASTR--IKFMTTGVLVRLLQNARTMLENTIVVIDEVHERSID 737
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
+D ++ ++K++ + + +K++LMSAT+N + F +FF G HI G T+P+ +Y+LED+L
Sbjct: 738 TDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFPITDYFLEDIL 797
Query: 250 N 250
+
Sbjct: 798 S 798
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 18 AGCGKTTQVPQFILDDEIARNRGS--ECCIMVTQPRRISAIAL 58
G GK+TQV QFIL D + + +G + I+ TQPRRISAI L
Sbjct: 629 TGSGKSTQVVQFIL-DFLQKEKGDFGKTKIVCTQPRRISAIGL 670
>sp|B4JT42|SPNE_DROGR Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
grimshawi GN=spn-E PE=3 SV=1
Length = 1434
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 120/202 (59%), Gaps = 14/202 (6%)
Query: 59 INKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAI 118
I K + +P++ I+ TGCGKTTQVPQ+ILD+ A + C I+VTQPRRI+AI+I
Sbjct: 126 IMKAIKENPVV---ILKGETGCGKTTQVPQYILDE--AFKKREFCNIVVTQPRRIAAISI 180
Query: 119 AERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHI 178
A RV QER Q PG+ YQ+ L K+ +LYCT G+L + L+ +HI
Sbjct: 181 ANRVCQERRWQ---PGTVCSYQVGLHKQSNSADTRLLYCTTGVLLNNLIRLKTLTHYTHI 237
Query: 179 VMDEIHERSMISDFLLAILKDVTD-KRKDLKLILMSATLNAEKFSQFFGGA----PILHI 233
V+DE+H+R DFLL +++ + + +K+ILMSAT++ +F ++F P++
Sbjct: 238 VLDEVHDRDQDMDFLLIVVRRLLALNSRHVKVILMSATIDTREFCKYFASCKSMPPVVAA 297
Query: 234 P-GFTYPVQEYYLEDVLNMTRK 254
G YP+ +YY + + N+ K
Sbjct: 298 SHGRKYPLVKYYRDQLKNINWK 319
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQ+ILD+ A + C I+VTQPRRI+AI++ N+
Sbjct: 143 GCGKTTQVPQYILDE--AFKKREFCNIVVTQPRRIAAISIANR 183
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 110/173 (63%), Gaps = 7/173 (4%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GKTTQ+PQ+ + E R+ G + + TQPRR++A+++A+RVA E D G
Sbjct: 157 VLVGETGSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 215 Q---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 110/173 (63%), Gaps = 7/173 (4%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GKTTQ+PQ+ + E R+ G + + TQPRR++A+++A+RVA E D G
Sbjct: 157 VLVGETGSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 215 Q---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 15/177 (8%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARN-----RGSECCIMVTQPRRISAIAIAERVAQERD 127
++ TG GKTTQ+PQ+ + E R+ RG C TQPRR++A+++A+RVA E D
Sbjct: 157 VLVGETGSGKTTQIPQWCV--EYMRSLPGPKRGVAC----TQPRRVAAMSVAQRVADEMD 210
Query: 128 EQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERS 187
G+ VGY IR E + + + Y T G+L +DP+L I++DE HER+
Sbjct: 211 VMLGQ---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERT 266
Query: 188 MISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
+ +D L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 267 LATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEI-ARNRGSECCIMVTQPRRISAIAIAERVAQERDEQC 130
+++ TG GK+TQ+PQF+L+ + GS I VTQPRR++AI +A RVAQE C
Sbjct: 100 TVLIGETGSGKSTQIPQFVLEKLYDTKKHGS---IAVTQPRRVAAINLATRVAQEHG--C 154
Query: 131 GRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMIS 190
+ G VGY +R + R + Y T G+L + + L S IV+DE HER++++
Sbjct: 155 -KLGEQVGYSVRFDNTTT-TRTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLT 212
Query: 191 DFLLAILKD-VTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 246
D +L LK + R DL++I+MSATL AEKFS+FF APIL + G + V++YYL+
Sbjct: 213 DLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLK 269
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
Query: 19 GCGKTTQVPQFILDDEI-ARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ+PQF+L+ + GS I VTQPRR++AI L +
Sbjct: 107 GSGKSTQIPQFVLEKLYDTKKHGS---IAVTQPRRVAAINLATR 147
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 109/172 (63%), Gaps = 8/172 (4%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+ Q+ LD+E N G C TQPRR++A+++A+RVA+E C +
Sbjct: 503 VIVGETGSGKTTQITQY-LDEEGFSNYGMIGC---TQPRRVAAVSVAKRVAEEVG--C-K 555
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E ++ I Y T G+L DP +S S I++DE HER++ +D
Sbjct: 556 VGHDVGYTIRFE-DVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDV 614
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L A+LK KR +LK+I+ SATLN+ KFS++F PI++IPG T+PV+ Y
Sbjct: 615 LFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLY 666
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKC 62
G GKTTQ+ Q+ LD+E N G C TQPRR++A+++ +
Sbjct: 509 GSGKTTQITQY-LDEEGFSNYGMIGC---TQPRRVAAVSVAKRV 548
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 108/173 (62%), Gaps = 10/173 (5%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG- 131
II TG GKTTQ+PQ++ + ++ C TQPRR++A+++A RVA+E G
Sbjct: 487 IIVGETGSGKTTQIPQYLHEAGFSKTGKIGC----TQPRRVAAMSVAARVAEE----VGC 538
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ G+ VGY IR E + ++ + Y T G+L + P L+ S +++DE HER++ +D
Sbjct: 539 KLGNEVGYSIRFE-DCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTD 597
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LKD+T R DLKL++ SAT++AE+FS +F GAP +IPG Y V +Y
Sbjct: 598 ILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHY 650
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQ++ + ++ C TQPRR++A+++
Sbjct: 493 GSGKTTQIPQYLHEAGFSKTGKIGC----TQPRRVAAMSV 528
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,423,603
Number of Sequences: 539616
Number of extensions: 4756320
Number of successful extensions: 10525
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 9851
Number of HSP's gapped (non-prelim): 380
length of query: 319
length of database: 191,569,459
effective HSP length: 117
effective length of query: 202
effective length of database: 128,434,387
effective search space: 25943746174
effective search space used: 25943746174
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)