Your job contains 1 sequence.
>psy496
MHAFYAQSITYRLKEDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALIN
KCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAE
RVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVM
DEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV
QEYYLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM
TRTLKRSETQQYPNDQQHT
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy496
(319 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 614 6.4e-60 1
UNIPROTKB|F5GZS0 - symbol:DHX36 "Probable ATP-dependent R... 614 3.1e-59 1
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 614 3.3e-59 1
UNIPROTKB|I3LRU8 - symbol:DHX36 "Uncharacterized protein"... 606 4.5e-59 1
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 610 9.3e-59 1
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 609 1.0e-58 1
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 609 1.9e-58 1
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 603 5.1e-58 1
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 600 9.9e-58 1
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 598 1.8e-57 1
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 577 4.0e-55 1
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 522 3.1e-49 1
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 523 3.4e-49 1
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 523 4.2e-49 1
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 504 4.1e-47 1
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 501 1.1e-46 1
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 500 1.7e-46 1
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 499 1.8e-46 1
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 498 2.2e-46 1
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 498 2.2e-46 1
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 497 2.7e-46 1
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 497 2.9e-46 1
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 497 2.9e-46 1
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 497 3.0e-46 1
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 492 8.2e-46 1
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 493 9.0e-46 1
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 492 1.2e-45 1
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 490 1.5e-45 1
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 487 3.3e-45 1
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 486 3.7e-45 1
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 486 3.7e-45 1
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 486 3.9e-45 1
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 486 3.9e-45 1
UNIPROTKB|F1S4S9 - symbol:DHX57 "Uncharacterized protein"... 478 4.8e-45 1
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 484 5.4e-45 1
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 484 6.4e-45 1
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 484 6.4e-45 1
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 484 6.4e-45 1
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 481 6.8e-45 1
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 484 7.2e-45 1
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 483 7.4e-45 1
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 483 7.8e-45 1
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 483 7.8e-45 1
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 483 8.2e-45 1
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 481 1.7e-44 1
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 481 1.7e-44 1
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 477 3.6e-44 1
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 477 3.9e-44 1
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 475 7.6e-44 1
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 462 2.3e-42 1
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 438 1.5e-41 2
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 440 1.5e-41 2
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 438 1.5e-41 2
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 453 1.5e-41 1
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 439 1.9e-41 2
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 439 1.9e-41 2
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 439 1.9e-41 2
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 452 2.0e-41 1
MGI|MGI:2147067 - symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His... 452 2.2e-41 1
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 452 2.2e-41 1
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 435 3.1e-41 2
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 438 4.9e-41 2
DICTYBASE|DDB_G0267516 - symbol:dhx57 "RWD domain-contain... 438 7.3e-40 1
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 436 1.1e-39 1
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 434 1.8e-39 1
UNIPROTKB|G4MR96 - symbol:MGG_04709 "Uncharacterized prot... 431 4.3e-39 1
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 424 2.3e-38 1
WB|WBGene00009922 - symbol:F52B5.3 species:6239 "Caenorha... 419 7.5e-38 1
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 418 8.2e-38 1
UNIPROTKB|D6RA70 - symbol:YTHDC2 "Probable ATP-dependent ... 411 1.1e-37 1
ASPGD|ASPL0000008624 - symbol:AN5839 species:162425 "Emer... 416 1.6e-37 1
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 415 1.8e-37 1
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 411 2.7e-37 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 411 3.2e-37 1
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 412 4.0e-37 1
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 411 5.4e-37 1
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 411 5.4e-37 1
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 411 5.5e-37 1
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 397 1.1e-36 2
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 390 1.1e-35 2
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 393 4.4e-35 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 380 3.0e-34 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 378 4.2e-34 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 375 8.8e-34 1
RGD|1563192 - symbol:Ythdc2 "YTH domain containing 2" spe... 366 1.2e-33 1
POMBASE|SPCC895.09c - symbol:ucp12 "ATP-dependent RNA hel... 367 2.0e-33 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 366 9.8e-33 1
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 363 1.7e-32 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 362 2.3e-32 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 362 2.4e-32 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 362 2.7e-32 1
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 361 2.9e-32 1
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 298 3.6e-32 2
POMBASE|SPBC15C4.05 - symbol:SPBC15C4.05 "ATP-dependent R... 360 1.5e-31 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 355 2.0e-31 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 351 4.3e-31 1
CGD|CAL0002969 - symbol:orf19.107 species:5476 "Candida a... 349 8.2e-31 1
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 349 9.3e-31 1
POMBASE|SPAC20H4.09 - symbol:SPAC20H4.09 "ATP-dependent R... 322 1.0e-30 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 350 1.0e-30 1
WARNING: Descriptions of 196 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 118/182 (64%), Positives = 146/182 (80%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 140 TVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCG 199
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSDP LS VSHIV+DEIHER++ SD
Sbjct: 200 S-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSD 258
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ + R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LEDV+
Sbjct: 259 VLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEK 318
Query: 252 TR 253
R
Sbjct: 319 IR 320
Score = 201 (75.8 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 38/58 (65%), Positives = 48/58 (82%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
++D+LN R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LEDV+ R
Sbjct: 264 VKDLLNF-RSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 320
Score = 143 (55.4 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++ +
Sbjct: 147 GCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAER 189
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 614 (221.2 bits), Expect = 3.1e-59, P = 3.1e-59
Identities = 118/182 (64%), Positives = 146/182 (80%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 226 TVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCG 285
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSDP LS VSHIV+DEIHER++ SD
Sbjct: 286 S-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSD 344
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ + R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LEDV+
Sbjct: 345 VLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEK 404
Query: 252 TR 253
R
Sbjct: 405 IR 406
Score = 201 (75.8 bits), Expect = 9.1e-24, Sum P(2) = 9.1e-24
Identities = 38/58 (65%), Positives = 48/58 (82%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
++D+LN R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LEDV+ R
Sbjct: 350 VKDLLNF-RSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
Score = 143 (55.4 bits), Expect = 9.1e-24, Sum P(2) = 9.1e-24
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++ +
Sbjct: 233 GCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAER 275
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 614 (221.2 bits), Expect = 3.3e-59, P = 3.3e-59
Identities = 118/182 (64%), Positives = 146/182 (80%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 226 TVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCG 285
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSDP LS VSHIV+DEIHER++ SD
Sbjct: 286 S-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSD 344
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ + R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LEDV+
Sbjct: 345 VLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEK 404
Query: 252 TR 253
R
Sbjct: 405 IR 406
Score = 201 (75.8 bits), Expect = 9.5e-24, Sum P(2) = 9.5e-24
Identities = 38/58 (65%), Positives = 48/58 (82%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
++D+LN R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LEDV+ R
Sbjct: 350 VKDLLNF-RSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIR 406
Score = 143 (55.4 bits), Expect = 9.5e-24, Sum P(2) = 9.5e-24
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++ +
Sbjct: 233 GCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAER 275
>UNIPROTKB|I3LRU8 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000027576 Uniprot:I3LRU8
Length = 439
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 115/182 (63%), Positives = 145/182 (79%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 230 TVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAETCG 289
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSDP LS VSHI++DEIHER++ SD
Sbjct: 290 S-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHILLDEIHERNLQSD 348
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ R DLK++LMSATLNAEKFS++FG P++HIPGFT+PV EY LED++
Sbjct: 349 VLMTVIKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 408
Query: 252 TR 253
R
Sbjct: 409 IR 410
Score = 193 (73.0 bits), Expect = 6.0e-24, Sum P(2) = 6.0e-24
Identities = 35/58 (60%), Positives = 48/58 (82%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
++D+L+ R DLK++LMSATLNAEKFS++FG P++HIPGFT+PV EY LED++ R
Sbjct: 354 IKDLLSY-RPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 410
Score = 143 (55.4 bits), Expect = 6.0e-24, Sum P(2) = 6.0e-24
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++ +
Sbjct: 237 GCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAER 279
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 610 (219.8 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 116/182 (63%), Positives = 145/182 (79%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 228 TVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCG 287
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSDP LS VSHIV+DEIHER++ SD
Sbjct: 288 N-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSD 346
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ R DLK++LMSATLNAEKFS++FG P++HIPGFT+PV EY LED++
Sbjct: 347 VLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 406
Query: 252 TR 253
R
Sbjct: 407 IR 408
Score = 192 (72.6 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 35/58 (60%), Positives = 48/58 (82%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
++D+L+ R DLK++LMSATLNAEKFS++FG P++HIPGFT+PV EY LED++ R
Sbjct: 352 VKDLLSY-RPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 408
Score = 143 (55.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++ +
Sbjct: 235 GCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAER 277
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 609 (219.4 bits), Expect = 1.0e-58, P = 1.0e-58
Identities = 117/182 (64%), Positives = 145/182 (79%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILDD I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 220 TVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCG 279
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSD LS VSHIV+DEIHER++ SD
Sbjct: 280 N-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSD 338
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ + R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LED++
Sbjct: 339 VLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 398
Query: 252 TR 253
R
Sbjct: 399 IR 400
Score = 204 (76.9 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
++D+LN R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LED++ R +
Sbjct: 344 IKDLLNF-RPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYV 402
Query: 305 KRSETQQ 311
+ Q+
Sbjct: 403 PEQKEQR 409
Score = 148 (57.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILDD I R +GS C I+ TQPRRISAI++ +
Sbjct: 227 GCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAER 269
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 609 (219.4 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 117/182 (64%), Positives = 145/182 (79%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILDD I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 340 TVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCG 399
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSD LS VSHIV+DEIHER++ SD
Sbjct: 400 N-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSD 458
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ + R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LED++
Sbjct: 459 VLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 518
Query: 252 TR 253
R
Sbjct: 519 IR 520
Score = 204 (76.9 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
++D+LN R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LED++ R +
Sbjct: 464 IKDLLNF-RPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYV 522
Query: 305 KRSETQQ 311
+ Q+
Sbjct: 523 PEQKEQR 529
Score = 148 (57.2 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILDD I R +GS C I+ TQPRRISAI++ +
Sbjct: 347 GCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAER 389
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 603 (217.3 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 116/182 (63%), Positives = 144/182 (79%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 219 TVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVATERAESCG 278
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSD LS VSHIV+DEIHER++ SD
Sbjct: 279 N-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSD 337
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LED++
Sbjct: 338 VLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 397
Query: 252 TR 253
R
Sbjct: 398 IR 399
Score = 196 (74.1 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 36/58 (62%), Positives = 48/58 (82%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
++D+L+ R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LED++ R
Sbjct: 343 IKDLLHF-RSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 399
Score = 146 (56.5 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT 64
GCGKTTQV QFILD+ I R +GS C I+ TQPRRISAI++ + T
Sbjct: 226 GCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAT 271
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 600 (216.3 bits), Expect = 9.9e-58, P = 9.9e-58
Identities = 116/182 (63%), Positives = 144/182 (79%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILDD I R +GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 207 TVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAAERAEACG 266
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G S GYQIRL+ LPRK+GSILYCT GI+ + +QSD LS +SH+V+DEIHER++ SD
Sbjct: 267 N-GKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSD 325
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L++I+KD+ + R DLK+ILMSATLNAEKFS++F P++HIPGFT+PV EY LEDV+
Sbjct: 326 VLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEK 385
Query: 252 TR 253
R
Sbjct: 386 LR 387
Score = 194 (73.4 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
++D+LN+ R DLK+ILMSATLNAEKFS++F P++HIPGFT+PV EY LEDV+ R
Sbjct: 331 IKDLLNV-RLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLR 387
Score = 148 (57.2 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILDD I R +GS C I+ TQPRRISAI++ +
Sbjct: 214 GCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAER 256
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 598 (215.6 bits), Expect = 1.8e-57, P = 1.8e-57
Identities = 116/182 (63%), Positives = 143/182 (78%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++I TGCGKTTQV QFILD+ I R GS C I+ TQPRRISAI++AERVA ER E CG
Sbjct: 218 TVISGETGCGKTTQVTQFILDNYIERGIGSACRIVCTQPRRISAISVAERVAAERAESCG 277
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+S GYQIRL+ LPRK+GSILYCT GI+ + +QSD LS VSHIV+DEIHER++ SD
Sbjct: 278 N-GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSD 336
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ ++KD+ R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LED++
Sbjct: 337 VLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 396
Query: 252 TR 253
R
Sbjct: 397 IR 398
Score = 196 (74.1 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 36/58 (62%), Positives = 48/58 (82%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
++D+L+ R DLK+ILMSATLNAEKFS++FG P++HIPGFT+PV EY LED++ R
Sbjct: 342 IKDLLHF-RSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 398
Score = 138 (53.6 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILD+ I R GS C I+ TQPRRISAI++ +
Sbjct: 225 GCGKTTQVTQFILDNYIERGIGSACRIVCTQPRRISAISVAER 267
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 577 (208.2 bits), Expect = 4.0e-55, P = 4.0e-55
Identities = 109/179 (60%), Positives = 140/179 (78%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTTQV QFILDD I R +GS C ++ TQPRRISAI++AERVA ER E G
Sbjct: 240 VISGETGCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGE 299
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G S GYQIRL+ LPRK+GS+LYCT G++ + + SDP LS ++H+V+DEIHERS+ SD
Sbjct: 300 -GKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDI 358
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
L+ I+KD+ R DLK++LMSATLNAEKFS++F P++HIPG+T+PV EY LEDV+ +
Sbjct: 359 LITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVEL 417
Score = 182 (69.1 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 300
++D+L R DLK++LMSATLNAEKFS++F P++HIPG+T+PV EY LEDV+ +
Sbjct: 363 VKDLLT-ARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVEL 417
Score = 143 (55.4 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQV QFILDD I R +GS C ++ TQPRRISAI++ +
Sbjct: 246 GCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAISVAER 288
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 522 (188.8 bits), Expect = 3.1e-49, P = 3.1e-49
Identities = 103/186 (55%), Positives = 139/186 (74%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGKTTQ+PQFIL++EI+ RG++C I+ TQPRRISAI++A R++ ER E G
Sbjct: 248 VVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGE 307
Query: 133 PGSSVGYQIRLE-KELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
SVGYQIRLE K + R +L+CT G+L + DP L+ VSH+++DEIHER M D
Sbjct: 308 ---SVGYQIRLESKRSDQTR--LLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNED 362
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL IL+D+ +R DL+LILMSAT+NA+ FS +FG +P +HIPGFT+PV E +LEDVL
Sbjct: 363 FLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEK 422
Query: 252 TRKDLK 257
+R ++K
Sbjct: 423 SRYNIK 428
Score = 188 (71.2 bits), Expect = 9.9e-23, Sum P(2) = 9.9e-23
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR-T 303
L D+L R DL+LILMSAT+NA+ FS +FG +P +HIPGFT+PV E +LEDVL +R
Sbjct: 368 LRDLLPR-RPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYN 426
Query: 304 LKRSETQQY 312
+K S++ Y
Sbjct: 427 IKSSDSGNY 435
Score = 149 (57.5 bits), Expect = 9.9e-23, Sum P(2) = 9.9e-23
Identities = 27/43 (62%), Positives = 38/43 (88%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQ+PQFIL++EI+ RG++C I+ TQPRRISAI++ ++
Sbjct: 254 GCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASR 296
Score = 39 (18.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCT 158
R GS+ +I++ E RK GS+L T
Sbjct: 133 RHGSTQK-EIKMSTETERKLGSLLKTT 158
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 523 (189.2 bits), Expect = 3.4e-49, P = 3.4e-49
Identities = 111/204 (54%), Positives = 143/204 (70%)
Query: 52 RISAIALINKCLTLSPILSPSIIYTS--TGCGKTTQVPQFILDDEIARNRGSECCIMVTQ 109
R S A + L+ I +I S TGCGKTTQ+PQFIL+ EI NRG+ I+ TQ
Sbjct: 217 RTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQ 276
Query: 110 PRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSD 169
PRRISA++++ERVA ER EQ G SVGY++RLE R +L+CT GIL + D
Sbjct: 277 PRRISAMSVSERVAYERGEQLGE---SVGYKVRLEGVKGRDT-RLLFCTTGILLRRLLVD 332
Query: 170 PILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAP 229
L GV+H+++DEIHER M DFLL ILKD+ +R +LKLILMSATL+AE FS +FGGA
Sbjct: 333 RNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAG 392
Query: 230 ILHIPGFTYPVQEYYLEDVLNMTR 253
+++IPGFTYPV+ ++LED+L MTR
Sbjct: 393 VIYIPGFTYPVRSHFLEDILEMTR 416
Score = 194 (73.4 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 37/58 (63%), Positives = 50/58 (86%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L+D+L+ R +LKLILMSATL+AE FS +FGGA +++IPGFTYPV+ ++LED+L MTR
Sbjct: 360 LKDLLSR-RSELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTR 416
Score = 138 (53.6 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
GCGKTTQ+PQFIL+ EI NRG+ I+ TQPRRISA+++
Sbjct: 246 GCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSV 285
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 523 (189.2 bits), Expect = 4.2e-49, P = 4.2e-49
Identities = 107/187 (57%), Positives = 135/187 (72%)
Query: 65 LSPILSPSIIYTS--TGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERV 122
L I + ++ S TGCGKTTQ+PQ+IL+ EI RG+ C I+ TQPRRISAI+++ERV
Sbjct: 309 LKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSERV 368
Query: 123 AQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDE 182
A ER EQ G SVGY++RLE R +L+CT G+L + D L GV+H+V+DE
Sbjct: 369 AAERGEQIGE---SVGYKVRLEGMRGRDT-RLLFCTTGVLLRRLLVDRSLKGVTHVVVDE 424
Query: 183 IHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQE 242
IHER M DFLL +LKD+ +R DLKLILMSATLNAE FS +FGGAP +HIPGFTYPV+
Sbjct: 425 IHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRA 484
Query: 243 YYLEDVL 249
++LED L
Sbjct: 485 HFLEDYL 491
Score = 190 (71.9 bits), Expect = 7.9e-22, Sum P(2) = 7.9e-22
Identities = 38/54 (70%), Positives = 45/54 (83%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 298
L+D+L R DLKLILMSATLNAE FS +FGGAP +HIPGFTYPV+ ++LED L
Sbjct: 439 LKDLLPR-RPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYL 491
Score = 140 (54.3 bits), Expect = 7.9e-22, Sum P(2) = 7.9e-22
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
GCGKTTQ+PQ+IL+ EI RG+ C I+ TQPRRISAI++
Sbjct: 325 GCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISV 364
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 504 (182.5 bits), Expect = 4.1e-47, P = 4.1e-47
Identities = 97/180 (53%), Positives = 136/180 (75%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGKTTQ+PQ+IL+ EI RG+ C I+ TQPRRISA+A++ERV+ ER E G
Sbjct: 280 VVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGE 339
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+VG+++RLE + K +L+CT+GIL + SD L+GV+H+ +DEIHER M DF
Sbjct: 340 ---TVGFKVRLEG-MRGKNTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDF 395
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
L+ +LK++ +R DL+L+LMSATLNAE FS ++GGAP +HIPGFT+PV+ ++LEDVL +T
Sbjct: 396 LIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEIT 455
Score = 185 (70.2 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 33/49 (67%), Positives = 43/49 (87%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
R DL+L+LMSATLNAE FS ++GGAP +HIPGFT+PV+ ++LEDVL +T
Sbjct: 407 RPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEIT 455
Score = 138 (53.6 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
GCGKTTQ+PQ+IL+ EI RG+ C I+ TQPRRISA+A+
Sbjct: 286 GCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAV 325
Score = 38 (18.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 111 RRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSI--LYCT 158
R + AIA + + + CG+ Y LE E+ RG+ + CT
Sbjct: 268 RLLQAIARNQVIVVSGETGCGKTTQLPQYI--LESEIESGRGAFCNIICT 315
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 501 (181.4 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 95/194 (48%), Positives = 139/194 (71%)
Query: 59 INKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAI 118
I + ++ +P++ I+ +TGCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++
Sbjct: 393 ILEAISQNPVV---IVRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSV 449
Query: 119 AERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHI 178
AERVA ER E+ PG S GY +R E LPR SI++CT G+L +++ + G+SH+
Sbjct: 450 AERVAYERGEE---PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHV 504
Query: 179 VMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTY 238
++DEIHER + +DFLL +L+DV +++++LMSAT++ F ++F PI+ + G TY
Sbjct: 505 IVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTY 564
Query: 239 PVQEYYLEDVLNMT 252
PVQEY+LED + MT
Sbjct: 565 PVQEYFLEDCIQMT 578
Score = 155 (59.6 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++ +
Sbjct: 410 GCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAER 452
Score = 135 (52.6 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L DV+ +++++LMSAT++ F ++F PI+ + G TYPVQEY+LED + MT
Sbjct: 523 LRDVVQ-AYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 578
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 500 (181.1 bits), Expect = 1.7e-46, P = 1.7e-46
Identities = 111/225 (49%), Positives = 148/225 (65%)
Query: 34 EIARNRGSECCI-MVTQPRRISAIA---LINKCLTLSPILSPSIIYTSTGCGKTTQVPQF 89
E R R S I M Q +++ A I +CL + +L +I TGCGKTTQ+PQF
Sbjct: 562 EFKRKRSSRRYISMQEQRQKLPAWQKREAILECLVKNQVL---VISGMTGCGKTTQIPQF 618
Query: 90 ILDDEIARNRGSECC-IMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELP 148
ILD+ + R I+ TQPRRISAIA+A RVAQER E G S GYQIRLE +
Sbjct: 619 ILDNFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGH---STGYQIRLET-VR 674
Query: 149 RKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLK 208
+++CT G+L ++ DP LSGV+H+++DE+HER+ SDFLL +LKD+ KR DLK
Sbjct: 675 SSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLK 734
Query: 209 LILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 253
+I+MSATLNAE FSQ+F P +HIPG T+PV++++LED + TR
Sbjct: 735 VIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIAKTR 779
Score = 173 (66.0 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 32/58 (55%), Positives = 46/58 (79%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L+D++ + R DLK+I+MSATLNAE FSQ+F P +HIPG T+PV++++LED + TR
Sbjct: 723 LKDLI-VKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIAKTR 779
Score = 122 (48.0 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 17 LAGCGKTTQVPQFILDDEIARNRGSECC-IMVTQPRRISAIALINK 61
+ GCGKTTQ+PQFILD+ + R I+ TQPRRISAIA+ +
Sbjct: 606 MTGCGKTTQIPQFILDNFLQTGRPDRVANIICTQPRRISAIAVATR 651
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 499 (180.7 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 94/180 (52%), Positives = 131/180 (72%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++AERVA ER E+
Sbjct: 409 IIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEE--- 465
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG S GY +R E LPR SI++CT G+L +++ + G+SH+++DEIHER + +DF
Sbjct: 466 PGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDF 523
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV +++++LMSAT++ F ++F PI+ + G TYPVQEY+LED + MT
Sbjct: 524 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 583
Score = 155 (59.6 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++ +
Sbjct: 415 GCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAER 457
Score = 135 (52.6 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L DV+ +++++LMSAT++ F ++F PI+ + G TYPVQEY+LED + MT
Sbjct: 528 LRDVVQ-AYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 583
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 498 (180.4 bits), Expect = 2.2e-46, P = 2.2e-46
Identities = 94/180 (52%), Positives = 131/180 (72%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++AERVA ER E+
Sbjct: 408 IIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEE--- 464
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG S GY +R E LPR SI++CT G+L +++ + G+SH+++DEIHER + +DF
Sbjct: 465 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDF 522
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV +++++LMSAT++ F ++F PI+ + G TYPVQEY+LED + MT
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 582
Score = 155 (59.6 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++ +
Sbjct: 414 GCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAER 456
Score = 135 (52.6 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L DV+ +++++LMSAT++ F ++F PI+ + G TYPVQEY+LED + MT
Sbjct: 527 LRDVVQ-AYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 582
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 498 (180.4 bits), Expect = 2.2e-46, P = 2.2e-46
Identities = 94/180 (52%), Positives = 131/180 (72%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++AERVA ER E+
Sbjct: 408 IIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEE--- 464
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG S GY +R E LPR SI++CT G+L +++ + G+SH+++DEIHER + +DF
Sbjct: 465 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDF 522
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV +++++LMSAT++ F ++F PI+ + G TYPVQEY+LED + MT
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 582
Score = 155 (59.6 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++ +
Sbjct: 414 GCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAER 456
Score = 135 (52.6 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L DV+ +++++LMSAT++ F ++F PI+ + G TYPVQEY+LED + MT
Sbjct: 527 LRDVVQ-AYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 582
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 497 (180.0 bits), Expect = 2.7e-46, P = 2.7e-46
Identities = 90/177 (50%), Positives = 131/177 (74%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTT++PQ +L+ I RG+ C +++TQPRRISAI++A+RVAQE +
Sbjct: 498 VIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRK 557
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+VGYQ+RLE + P + G++L+CT GIL +Q +P L GVSH+V+DE+HER + +DF
Sbjct: 558 ---NVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDF 614
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LL +LK + DL+L+LMSAT + ++FS +FGG P++ +PGF YPV+EYYLE++L
Sbjct: 615 LLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVPGFMYPVKEYYLEEIL 671
Score = 158 (60.7 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 26/44 (59%), Positives = 38/44 (86%)
Query: 255 DLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 298
DL+L+LMSAT + ++FS +FGG P++ +PGF YPV+EYYLE++L
Sbjct: 628 DLRLVLMSATGDNQRFSHYFGGCPVVKVPGFMYPVKEYYLEEIL 671
Score = 134 (52.2 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIY 75
GCGKTT++PQ +L+ I RG+ C +++TQPRRISAI++ + L P + ++ Y
Sbjct: 504 GCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGY 561
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 497 (180.0 bits), Expect = 2.9e-46, P = 2.9e-46
Identities = 95/194 (48%), Positives = 139/194 (71%)
Query: 59 INKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAI 118
I + ++ +P++ II +TGCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++
Sbjct: 394 ILEAISQNPVV---IIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSV 450
Query: 119 AERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHI 178
AERVA ER E+ PG S GY +R E LPR SI++CT G+L +++ + G+SH+
Sbjct: 451 AERVAYERGEE---PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHV 505
Query: 179 VMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTY 238
++DEIHER + +DFLL +L+DV +++++LMSAT++ F ++F PI+ + G T+
Sbjct: 506 IVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTF 565
Query: 239 PVQEYYLEDVLNMT 252
PVQEY+LED + MT
Sbjct: 566 PVQEYFLEDCIQMT 579
Score = 154 (59.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++ +
Sbjct: 411 GCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAER 453
Score = 131 (51.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L DV+ +++++LMSAT++ F ++F PI+ + G T+PVQEY+LED + MT
Sbjct: 524 LRDVVQ-AYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 579
Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGI---LPEVMQS---DPILSGVSHIVMD-EIHE 185
PG ++ Y ++ E+ GS Y + +P Q DP+ SGV+ I++ I E
Sbjct: 655 PGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAE 714
Query: 186 RSM-ISDFLLAI 196
S+ I+D + I
Sbjct: 715 TSITINDVVYVI 726
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 497 (180.0 bits), Expect = 2.9e-46, P = 2.9e-46
Identities = 95/194 (48%), Positives = 139/194 (71%)
Query: 59 INKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAI 118
I + ++ +P++ II +TGCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++
Sbjct: 394 ILEAISQNPVV---IIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSV 450
Query: 119 AERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHI 178
AERVA ER E+ PG S GY +R E LPR SI++CT G+L +++ + G+SH+
Sbjct: 451 AERVAYERGEE---PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHV 505
Query: 179 VMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTY 238
++DEIHER + +DFLL +L+DV +++++LMSAT++ F ++F PI+ + G T+
Sbjct: 506 IVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTF 565
Query: 239 PVQEYYLEDVLNMT 252
PVQEY+LED + MT
Sbjct: 566 PVQEYFLEDCIQMT 579
Score = 154 (59.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQFILDD I +R +EC I+VTQPRRISA+++ +
Sbjct: 411 GCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAER 453
Score = 131 (51.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L DV+ +++++LMSAT++ F ++F PI+ + G T+PVQEY+LED + MT
Sbjct: 524 LRDVVQ-AYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 579
Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGI---LPEVMQS---DPILSGVSHIVMD-EIHE 185
PG ++ Y ++ E+ GS Y + +P Q DP+ SGV+ I++ I E
Sbjct: 655 PGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAE 714
Query: 186 RSM-ISDFLLAI 196
S+ I+D + I
Sbjct: 715 TSITINDVVYVI 726
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 497 (180.0 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 98/180 (54%), Positives = 131/180 (72%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQ+ Q+ILDD I +G I VTQPRRISAI++AERVA+ER EQ G
Sbjct: 404 IIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLG- 462
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+VGY +R E PR G+IL+CT G+L +++ L GVSHI++DEIHER + SDF
Sbjct: 463 --DTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEAG--LRGVSHIIVDEIHERDVNSDF 518
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL IL+D+ D DL +ILMSAT++ KFS++FG P+L +PG +PVQ+++LED++ MT
Sbjct: 519 LLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMT 578
Score = 159 (61.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 29/67 (43%), Positives = 50/67 (74%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L D+++ T DL +ILMSAT++ KFS++FG P+L +PG +PVQ+++LED++ MT +
Sbjct: 523 LRDMVD-TYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFV 581
Query: 305 KRSETQQ 311
+E+++
Sbjct: 582 PSAESRR 588
Score = 127 (49.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQ+ Q+ILDD I +G I VTQPRRISAI++ +
Sbjct: 410 GCGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAER 452
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/66 (21%), Positives = 27/66 (40%)
Query: 80 CGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGY 139
C K+ P+F + +NR C + +P + I + ++D + V Y
Sbjct: 11 CAKSQIEPKFDIRQTGPKNRQRFLCEVRVEPN--TYIGVGNST-NKKDAEKNACRDFVNY 67
Query: 140 QIRLEK 145
+R+ K
Sbjct: 68 LVRVGK 73
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 492 (178.3 bits), Expect = 8.2e-46, P = 8.2e-46
Identities = 93/181 (51%), Positives = 132/181 (72%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQ+ILDD I +R +EC I+VTQPRRISA+A+AERVA ER E+
Sbjct: 411 IIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEE--- 467
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG S GY +R E LPR SI++CT G+L +++ + G+SH+++DEIHER + +DF
Sbjct: 468 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDF 525
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV +++++LMSAT++ F ++F PI+ + G T+PVQEY+LED + MT
Sbjct: 526 LLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 585
Query: 253 R 253
+
Sbjct: 586 Q 586
Score = 155 (59.6 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQ+ILDD I +R +EC I+VTQPRRISA+A+ +
Sbjct: 417 GCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAER 459
Score = 133 (51.9 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L DV+ + +++++LMSAT++ F ++F PI+ + G T+PVQEY+LED + MT+
Sbjct: 530 LRDVV-LAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQ 586
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 493 (178.6 bits), Expect = 9.0e-46, P = 9.0e-46
Identities = 97/181 (53%), Positives = 133/181 (73%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGKTTQ+PQFILD + + + I+ TQPRRISAI++AERVA+ER E R
Sbjct: 557 VVSGMTGCGKTTQIPQFILDASLQGSPNAVANIICTQPRRISAISVAERVAKERTE---R 613
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L G++H+++DE+HER+ SDF
Sbjct: 614 VGVTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTEESDF 672
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R DL++ILMSATLNAE FSQ+F PI++IPG T+PV +++LEDV+ MT
Sbjct: 673 LLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMT 732
Query: 253 R 253
R
Sbjct: 733 R 733
Score = 180 (68.4 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 37/75 (49%), Positives = 55/75 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR-T 303
L+D++ + R DL++ILMSATLNAE FSQ+F PI++IPG T+PV +++LEDV+ MTR
Sbjct: 677 LKDIM-VQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTRYV 735
Query: 304 LKRSETQQYPNDQQH 318
L+ S + Q++
Sbjct: 736 LEDSSPYRRKTKQEN 750
Score = 120 (47.3 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 17 LAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
+ GCGKTTQ+PQFILD + + + I+ TQPRRISAI++ +
Sbjct: 561 MTGCGKTTQIPQFILDASLQGSPNAVANIICTQPRRISAISVAER 605
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 492 (178.3 bits), Expect = 1.2e-45, P = 1.2e-45
Identities = 93/181 (51%), Positives = 132/181 (72%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQ+ILDD I +R +EC I+VTQPRRISA+A+AERVA ER E+
Sbjct: 410 IIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEE--- 466
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG S GY +R E LPR SI++CT G+L +++ + G+SH+++DEIHER + +DF
Sbjct: 467 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDF 524
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV +++++LMSAT++ F ++F PI+ + G T+PVQEY+LED + MT
Sbjct: 525 LLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 584
Query: 253 R 253
+
Sbjct: 585 Q 585
Score = 155 (59.6 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQ+ILDD I +R +EC I+VTQPRRISA+A+ +
Sbjct: 416 GCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAER 458
Score = 133 (51.9 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L DV+ + +++++LMSAT++ F ++F PI+ + G T+PVQEY+LED + MT+
Sbjct: 529 LRDVV-LAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQ 585
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 490 (177.5 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 89/177 (50%), Positives = 130/177 (73%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTT++PQ +L+ I RG+ C +++TQPRRISAI++A+RVAQE +
Sbjct: 498 VIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRK 557
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+VGYQ+RLE + P + G++L+CT GIL +Q +P L GVSH+V+DE+HER + +DF
Sbjct: 558 ---NVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDF 614
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LL +LK + DL+L+LMSAT + ++FS +FG P++ +PGF YPV+EYYLE++L
Sbjct: 615 LLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVPGFMYPVKEYYLEEIL 671
Score = 151 (58.2 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 25/44 (56%), Positives = 37/44 (84%)
Query: 255 DLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 298
DL+L+LMSAT + ++FS +FG P++ +PGF YPV+EYYLE++L
Sbjct: 628 DLRLVLMSATGDNQRFSHYFGDCPVVKVPGFMYPVKEYYLEEIL 671
Score = 134 (52.2 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIY 75
GCGKTT++PQ +L+ I RG+ C +++TQPRRISAI++ + L P + ++ Y
Sbjct: 504 GCGKTTRIPQLLLEHYILEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGY 561
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 487 (176.5 bits), Expect = 3.3e-45, P = 3.3e-45
Identities = 94/188 (50%), Positives = 136/188 (72%)
Query: 66 SPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQE 125
SP++ II +TGCGKTTQVPQ+ILD+ I +R ++C I+VTQPRRISA+++AERVA E
Sbjct: 406 SPVV---IIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAERVAFE 462
Query: 126 RDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHE 185
R E+ G+ S GY +R E LPR S+L+CT G+L ++S + G+SH+++DEIHE
Sbjct: 463 RGEEIGK---SCGYSVRFESVLPRPHASMLFCTVGVLLRKLESG--IRGISHVIVDEIHE 517
Query: 186 RSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYL 245
R + +DFLL +L+DV ++++ILMSAT++ F ++F PI+ + G T+PVQEYYL
Sbjct: 518 RDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYL 577
Query: 246 EDVLNMTR 253
ED + MT+
Sbjct: 578 EDCIQMTQ 585
Score = 150 (57.9 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 1 MHAFYAQSITYRLKEDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALIN 60
MHA + + + GCGKTTQVPQ+ILD+ I +R ++C I+VTQPRRISA+++
Sbjct: 400 MHAVHNSPVV--IIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAE 457
Query: 61 K 61
+
Sbjct: 458 R 458
Score = 137 (53.3 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT--- 301
L DV+ ++++ILMSAT++ F ++F PI+ + G T+PVQEYYLED + MT
Sbjct: 529 LRDVIQAF-PEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLEDCIQMTQFI 587
Query: 302 ---RTLKRSETQQYPNDQQHT 319
R K+ + + D + T
Sbjct: 588 PPPRDKKKKDKDEEGGDDEET 608
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 486 (176.1 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 95/219 (43%), Positives = 148/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + ++ I + P++ +I TGCGKTT++PQ +
Sbjct: 419 ELWRRRGPIWQEAPQLPVDPHRDTILSAIEQ----HPVV---VISGDTGCGKTTRIPQLL 471
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 472 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 528
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 160 (61.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 585 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 638
Query: 316 QQH 318
+H
Sbjct: 639 HRH 641
Score = 133 (51.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 460 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 511
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 486 (176.1 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 95/219 (43%), Positives = 148/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + ++ I + P++ +I TGCGKTT++PQ +
Sbjct: 419 ELWRRRGPIWQEAPQLPVDPHRDTILSAIEQ----HPVV---VISGDTGCGKTTRIPQLL 471
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 472 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 528
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 160 (61.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 585 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 638
Query: 316 QQH 318
+H
Sbjct: 639 HRH 641
Score = 133 (51.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 460 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 511
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 486 (176.1 bits), Expect = 3.9e-45, P = 3.9e-45
Identities = 95/219 (43%), Positives = 148/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + ++ I + P++ +I TGCGKTT++PQ +
Sbjct: 442 ELWRRRGPIWQEAPQLPVDPHRDTILSAIEQ----HPVV---VISGDTGCGKTTRIPQLL 494
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 495 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 551
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 552 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 611
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 612 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 650
Score = 160 (61.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 608 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 661
Query: 316 QQH 318
+H
Sbjct: 662 HRH 664
Score = 133 (51.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 483 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 534
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 486 (176.1 bits), Expect = 3.9e-45, P = 3.9e-45
Identities = 95/219 (43%), Positives = 148/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + ++ I + P++ +I TGCGKTT++PQ +
Sbjct: 447 ELWRRRGPIWQEAPQLPVDPHRDTILSAIEQ----HPVV---VISGDTGCGKTTRIPQLL 499
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 500 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 556
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 557 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 616
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 617 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 655
Score = 160 (61.4 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 613 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 666
Query: 316 QQH 318
+H
Sbjct: 667 HRH 669
Score = 133 (51.9 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 488 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 539
>UNIPROTKB|F1S4S9 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR006575
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00642
Pfam:PF05773 PROSITE:PS50103 SMART:SM00356 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR026290 PANTHER:PTHR11224 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU694750
Ensembl:ENSSSCT00000009281 OMA:HRYPYQA Uniprot:F1S4S9
Length = 745
Score = 478 (173.3 bits), Expect = 4.8e-45, P = 4.8e-45
Identities = 96/181 (53%), Positives = 129/181 (71%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGKTTQ+PQFILDD + I+ TQPRRISAI++AERVA+ER E R
Sbjct: 490 VVSGMTGCGKTTQIPQFILDDSLNGPPEKVANIVCTQPRRISAISVAERVAKERAE---R 546
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L GV+HI++DE+HER+ SDF
Sbjct: 547 VGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDF 605
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R L++ILMSATLNAE FS++F P++ IPG T+PV +Y+LED + +T
Sbjct: 606 LLLVLKDILLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQYFLEDAIAVT 665
Query: 253 R 253
R
Sbjct: 666 R 666
Score = 164 (62.8 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L+D+L + R L++ILMSATLNAE FS++F P++ IPG T+PV +Y+LED + +TR
Sbjct: 610 LKDIL-LQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQYFLEDAIAVTR 666
Score = 121 (47.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 17 LAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
+ GCGKTTQ+PQFILDD + I+ TQPRRISAI++ +
Sbjct: 494 MTGCGKTTQIPQFILDDSLNGPPEKVANIVCTQPRRISAISVAER 538
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 484 (175.4 bits), Expect = 5.4e-45, P = 5.4e-45
Identities = 95/219 (43%), Positives = 148/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 419 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VISGDTGCGKTTRIPQLL 471
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ ++ RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 472 LERYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 528
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 160 (61.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 585 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 638
Query: 316 QQH 318
+H
Sbjct: 639 HRH 641
Score = 134 (52.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ ++ RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 460 GCGKTTRIPQLLLERYVSEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 511
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 484 (175.4 bits), Expect = 6.4e-45, P = 6.4e-45
Identities = 95/219 (43%), Positives = 148/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 447 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VISGDTGCGKTTRIPQLL 499
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ ++ RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 500 LERYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 556
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 557 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 616
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 617 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 655
Score = 160 (61.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 613 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 666
Query: 316 QQH 318
+H
Sbjct: 667 HRH 669
Score = 134 (52.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ ++ RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 488 GCGKTTRIPQLLLERYVSEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 539
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 484 (175.4 bits), Expect = 6.4e-45, P = 6.4e-45
Identities = 96/219 (43%), Positives = 147/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 445 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VIAGDTGCGKTTRIPQLL 497
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 498 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 554
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+V+DE+HER + +DFLL +LK + L+L+
Sbjct: 555 GGALLFCTVGILLRKLQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLV 614
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 615 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 653
Score = 160 (61.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 611 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 664
Query: 316 QQH 318
+H
Sbjct: 665 HRH 667
Score = 133 (51.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 486 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 537
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 484 (175.4 bits), Expect = 6.4e-45, P = 6.4e-45
Identities = 95/219 (43%), Positives = 148/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 447 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VISGDTGCGKTTRIPQLL 499
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ ++ RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 500 LERYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 556
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 557 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 616
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 617 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 655
Score = 160 (61.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 613 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 666
Query: 316 QQH 318
+H
Sbjct: 667 HRH 669
Score = 134 (52.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ ++ RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 488 GCGKTTRIPQLLLERYVSEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 539
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 481 (174.4 bits), Expect = 6.8e-45, P = 6.8e-45
Identities = 97/185 (52%), Positives = 128/185 (69%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I STGCGKTTQVPQ +LDD I+R S C I+ TQPRRISAIAIAE V+ ER C
Sbjct: 173 LIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYER---CES 229
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G+SVGYQIRLE R+R SI YCT G+L + +QSDP++ +S +++DEIHERS+ +D
Sbjct: 230 LGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDL 289
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
L+ +LK + R DLK+ILMSAT+ + F +F P+ I G +PV+ YLEDVL+ T
Sbjct: 290 LMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKT 349
Query: 253 RKDLK 257
+ +
Sbjct: 350 NYEFQ 354
Score = 144 (55.7 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
GCGKTTQVPQ +LDD I+R S C I+ TQPRRISAIA+
Sbjct: 179 GCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAI 218
Score = 123 (48.4 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
R DLK+ILMSAT+ + F +F P+ I G +PV+ YLEDVL+ T
Sbjct: 301 RPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKT 349
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 484 (175.4 bits), Expect = 7.2e-45, P = 7.2e-45
Identities = 109/231 (47%), Positives = 151/231 (65%)
Query: 30 ILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTS-TGCGKTTQVPQ 88
+L + R + ++ +++ A A I + L L SP ++ + TGCGK+TQVPQ
Sbjct: 430 LLQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIES-SPVVVISGETGCGKSTQVPQ 488
Query: 89 FILDDEI-------ARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQI 141
FILD+ A+ I+ TQPRR+SAI +AERVA ER + R G VGYQI
Sbjct: 489 FILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLD---RIGQLVGYQI 545
Query: 142 RLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVT 201
RLE ++ + + +CT GIL + SDP+L V+H+++DE+HERS SDFLL ILK++
Sbjct: 546 RLENKVSQST-RLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLL 604
Query: 202 DKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
+RKDLK+ILMSATLNA FS +FGGAP+L IPG T+PVQ+ +LED+L M+
Sbjct: 605 RERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMS 655
Score = 184 (69.8 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 37/66 (56%), Positives = 51/66 (77%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L+++L RKDLK+ILMSATLNA FS +FGGAP+L IPG T+PVQ+ +LED+L M+ +
Sbjct: 600 LKNLLR-ERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFV 658
Query: 305 KRSETQ 310
+T+
Sbjct: 659 MEYDTK 664
Score = 93 (37.8 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 19 GCGKTTQVPQFILDDEI-------ARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQFILD+ A+ I+ TQPRR+SAI + +
Sbjct: 479 GCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAER 528
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 483 (175.1 bits), Expect = 7.4e-45, P = 7.4e-45
Identities = 95/219 (43%), Positives = 147/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 391 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VISGDTGCGKTTRIPQLL 443
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 444 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPSR 500
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 501 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 560
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 561 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 599
Score = 156 (60.0 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 26/43 (60%), Positives = 38/43 (88%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 298
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 557 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 599
Score = 133 (51.9 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 432 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 483
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 483 (175.1 bits), Expect = 7.8e-45, P = 7.8e-45
Identities = 95/219 (43%), Positives = 147/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 419 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VISGDTGCGKTTRIPQLL 471
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 472 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPSR 528
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 156 (60.0 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 26/43 (60%), Positives = 38/43 (88%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 298
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 585 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 133 (51.9 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 460 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 511
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 483 (175.1 bits), Expect = 7.8e-45, P = 7.8e-45
Identities = 95/219 (43%), Positives = 147/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 419 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VISGDTGCGKTTRIPQLL 471
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 472 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 528
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 529 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 588
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 589 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 156 (60.0 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 26/43 (60%), Positives = 38/43 (88%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 298
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 585 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 627
Score = 133 (51.9 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 460 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 511
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 483 (175.1 bits), Expect = 8.2e-45, P = 8.2e-45
Identities = 95/219 (43%), Positives = 147/219 (67%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 447 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VIAGDTGCGKTTRIPQLL 499
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 500 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRR---NVGFQVRLESKPPAR 556
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+++DE+HER + +DFLL +LK + L+L+
Sbjct: 557 GGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLV 616
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 617 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 655
Score = 160 (61.4 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 613 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 666
Query: 316 QQH 318
+H
Sbjct: 667 HRH 669
Score = 133 (51.9 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + +S L PS+
Sbjct: 488 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQR---VSHELGPSL 539
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 481 (174.4 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 96/181 (53%), Positives = 131/181 (72%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTTQ+PQFILDD ++ I+ TQPRRISAI++AERVA+ER E R
Sbjct: 560 VISGMTGCGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAERVAKERTE---R 616
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L GV+HI++DE+HER+ SDF
Sbjct: 617 VGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDTSLQGVTHIIVDEVHERTEESDF 675
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R +L++ILMSATLNAE FS++F P++ IPG T+PV +++LED + +T
Sbjct: 676 LLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSSCPVITIPGRTFPVDQFFLEDAIAVT 735
Query: 253 R 253
R
Sbjct: 736 R 736
Score = 159 (61.0 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 29/58 (50%), Positives = 46/58 (79%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L+D++ + R +L++ILMSATLNAE FS++F P++ IPG T+PV +++LED + +TR
Sbjct: 680 LKDIV-LQRPNLQVILMSATLNAELFSEYFSSCPVITIPGRTFPVDQFFLEDAIAVTR 736
Score = 124 (48.7 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 17 LAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
+ GCGKTTQ+PQFILDD ++ I+ TQPRRISAI++ +
Sbjct: 564 MTGCGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAER 608
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 481 (174.4 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 97/181 (53%), Positives = 128/181 (70%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTTQ+PQFILDD + I+ TQPRRISAI++AERVA+ER E R
Sbjct: 564 VISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAE---R 620
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L GVSHI++DE+HER+ SDF
Sbjct: 621 VGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDF 679
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R L++ILMSATLNAE FS +F P++ IPG T+PV +++LED + +T
Sbjct: 680 LLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVT 739
Query: 253 R 253
R
Sbjct: 740 R 740
Score = 155 (59.6 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 29/58 (50%), Positives = 44/58 (75%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L+D+++ R L++ILMSATLNAE FS +F P++ IPG T+PV +++LED + +TR
Sbjct: 684 LKDIVSQ-RPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 740
Score = 121 (47.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 17 LAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
+ GCGKTTQ+PQFILDD + I+ TQPRRISAI++ +
Sbjct: 568 MTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAER 612
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 477 (173.0 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 96/219 (43%), Positives = 146/219 (66%)
Query: 34 EIARNRG---SECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFI 90
E+ R RG E + P R + + I + P++ +I TGCGKTT++PQ +
Sbjct: 445 ELWRRRGPVWQEAPQLPVDPHRDTILNAIEQ----HPVV---VIAGDTGCGKTTRIPQLL 497
Query: 91 LDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRK 150
L+ + RG+ C +++TQPRRISA+++A+RV+ E R +VG+Q+RLE + P +
Sbjct: 498 LERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPTLRR---NVGFQVRLESKPPAR 554
Query: 151 RGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLI 210
G++L+CT GIL +QS+P L GVSH+V+DE HER + +DFLL +LK + L+L+
Sbjct: 555 GGALLFCTVGILLRKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLV 614
Query: 211 LMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L
Sbjct: 615 LMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL 653
Score = 160 (61.4 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPND 315
L+L+LMSAT + E+FS++FGG P++ +PGF YPV+E+YLED+L + QYP+
Sbjct: 611 LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDIL------AKLGKHQYPHR 664
Query: 316 QQH 318
+H
Sbjct: 665 HRH 667
Score = 131 (51.2 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCL-TLSPILSPSI 73
GCGKTT++PQ +L+ + RG+ C +++TQPRRISA+++ + L P L ++
Sbjct: 486 GCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPTLRRNV 541
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 477 (173.0 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 91/181 (50%), Positives = 129/181 (71%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TGCGKTTQVPQ+ILD+ I R S+C I+VTQPRRISA+++AERV+ ER E G+
Sbjct: 415 IIRGATGCGKTTQVPQYILDEFIKGGRASDCNIVVTQPRRISAVSVAERVSFERGEDVGK 474
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S GY +R E LPR SIL+CT G+L ++S + G+SH+++DEIHER + +DF
Sbjct: 475 ---SCGYSVRFESFLPRPHASILFCTVGVLLRKLESG--IRGISHVIVDEIHERDINTDF 529
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+DV D+++ILMSAT++ F ++F P++ + G +PVQEY+LED + MT
Sbjct: 530 LLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYFLEDCIQMT 589
Query: 253 R 253
+
Sbjct: 590 Q 590
Score = 145 (56.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQ+ILD+ I R S+C I+VTQPRRISA+++ +
Sbjct: 421 GCGKTTQVPQYILDEFIKGGRASDCNIVVTQPRRISAVSVAER 463
Score = 130 (50.8 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L DV+ D+++ILMSAT++ F ++F P++ + G +PVQEY+LED + MT+
Sbjct: 534 LRDVVQ-AYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYFLEDCIQMTQ 590
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 475 (172.3 bits), Expect = 7.6e-44, P = 7.6e-44
Identities = 95/181 (52%), Positives = 129/181 (71%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGKTTQ+PQFILDD + I+ TQPRRISAI++AERVA+ER E R
Sbjct: 557 VVSGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAE---R 613
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L GV+HI++DE+HER+ SDF
Sbjct: 614 VGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDF 672
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R L++ILMSATLNAE FS++F P++ IPG T+PV +++LED + +T
Sbjct: 673 LLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVT 732
Query: 253 R 253
R
Sbjct: 733 R 733
Score = 157 (60.3 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L+D++ + R L++ILMSATLNAE FS++F P++ IPG T+PV +++LED + +TR
Sbjct: 677 LKDIV-LQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTR 733
Score = 121 (47.7 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 17 LAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
+ GCGKTTQ+PQFILDD + I+ TQPRRISAI++ +
Sbjct: 561 MTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAER 605
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 462 (167.7 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 93/194 (47%), Positives = 137/194 (70%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTTQVPQ++LD + ++ C I+ TQPRRISAI++++R++ ER E GR
Sbjct: 237 LIAGETGCGKTTQVPQYLLD-HMWHSKKEACKIICTQPRRISAISVSDRISWERGETIGR 295
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGV---SHIVMDEIHERSMI 189
+VGY++RL+ E R+ S+++CT GIL V+ + S V +HI++DEIHER
Sbjct: 296 ---TVGYKVRLQSEGGRE-SSVVFCTNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSY 351
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDF+L IL+D+ L+LILMSATL+AE+FS++FGG P++ +PGFTYPV+ ++L+D L
Sbjct: 352 SDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDAL 411
Query: 250 NMTRKDLKLILMSA 263
++ D L+SA
Sbjct: 412 SVLNSDKNSHLLSA 425
Score = 173 (66.0 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 32/63 (50%), Positives = 49/63 (77%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L D+L + L+LILMSATL+AE+FS++FGG P++ +PGFTYPV+ ++L+D L++ +
Sbjct: 359 LRDLLP-SNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSD 417
Query: 305 KRS 307
K S
Sbjct: 418 KNS 420
Score = 117 (46.2 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQ++LD + ++ C I+ TQPRRISAI++ ++
Sbjct: 243 GCGKTTQVPQYLLD-HMWHSKKEACKIICTQPRRISAISVSDR 284
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 438 (159.2 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 90/183 (49%), Positives = 125/183 (68%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRG-SECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + G S+C I+ TQPRRISA+++A RV E + G
Sbjct: 589 VVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENG 648
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E +LYCT G+L +Q D +L+ VSH+++DE+HERS+
Sbjct: 649 PGGRNSLCGYQIRMESRASEST-RLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQ 707
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++
Sbjct: 708 SDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIV 767
Query: 250 NMT 252
T
Sbjct: 768 EET 770
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+++L R DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++ T
Sbjct: 715 LKEILQK-RSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIVEET 770
Score = 45 (20.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 249 LNMTRKDLKLILMSATLNAEKFSQF--FGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
+N + +L LIL + ++ QF GA ++ +PG + +Q+ Y D+L+ R
Sbjct: 837 MNPHKINLDLIL-ELLIYLDRSPQFRNIEGAVLIFLPGLAH-IQQLY--DLLSTDR 888
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 440 (159.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 88/182 (48%), Positives = 124/182 (68%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GK+TQVP F+L+D + +C I+ TQPRRISA+++A RV +E + G
Sbjct: 594 VVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIVCTQPRRISAVSLATRVCEELGCESGP 653
Query: 133 PG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMIS 190
G S GYQIR+E +LYCT G+L +Q D +LS +SH+++DE+HERS+ S
Sbjct: 654 GGKNSLCGYQIRMESRTGEAT-RLLYCTTGVLLRKLQEDGLLSSISHVIVDEVHERSVHS 712
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 250
DFLL ILK++ KR DL LILMSAT+++EKFS +F PIL I G +YPV+ +++EDV+
Sbjct: 713 DFLLVILKEILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHVEDVIE 772
Query: 251 MT 252
T
Sbjct: 773 AT 774
Score = 146 (56.5 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 29/57 (50%), Positives = 43/57 (75%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+++L+ R DL LILMSAT+++EKFS +F PIL I G +YPV+ +++EDV+ T
Sbjct: 719 LKEILHK-RSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHVEDVIEAT 774
Score = 108 (43.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQVP F+L+D + +C I+ TQPRRISA++L +
Sbjct: 600 GSGKSTQVPHFLLEDLLLDEGTRKCNIVCTQPRRISAVSLATR 642
Score = 43 (20.2 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 249 LNMTRKDLKLIL-MSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
+N + +L+LIL + A L+ + GA ++ +PG + +Q+ Y D+++ R
Sbjct: 841 MNPYKINLELILELLAYLDRSPQFKNTEGAVLIFLPGLAH-IQQLY--DLISTDR 892
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 438 (159.2 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 90/183 (49%), Positives = 124/183 (67%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARN-RGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + S+C I+ TQPRRISA+++A RV E + G
Sbjct: 592 VVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENG 651
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E +LYCT G+L +Q D +LS VSH+++DE+HERS+
Sbjct: 652 PGGRNSLCGYQIRMESRACEST-RLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQ 710
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++
Sbjct: 711 SDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 770
Query: 250 NMT 252
T
Sbjct: 771 EET 773
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+++L R DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++ T
Sbjct: 718 LKEILQK-RSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEET 773
Score = 45 (20.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 249 LNMTRKDLKLIL-MSATLNAEKFSQF--FGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
+N + +L LIL + A L +K QF GA ++ +PG + +Q+ Y D+L+ R
Sbjct: 840 MNPHKINLDLILELLAYL--DKSPQFRNIEGAVLIFLPGLAH-IQQLY--DLLSNDR 891
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 453 (164.5 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 98/212 (46%), Positives = 142/212 (66%)
Query: 47 VTQPRRISAIALINKCLTLSPILSPSIIYTS--TGCGKTTQVPQFILDDEIARNRGSECC 104
+T+ R I +T S + S +I S TGCGKTTQVPQ++LD + R + C
Sbjct: 180 ITKLRSKLPITSFKDAIT-SAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRET-CK 237
Query: 105 IMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPE 164
I+ TQPRRISA++++ER++ ER E G ++GY++RL+ + R S+++CT GIL
Sbjct: 238 IVCTQPRRISAMSVSERISCERGESIGE---NIGYKVRLQSKGGR-HSSVVFCTNGILLR 293
Query: 165 VMQSDPILSGVS---HIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKF 221
V+ +S VS HI++DEIHER SDF+LAI++D+ L+LILMSATL+AE+F
Sbjct: 294 VLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERF 353
Query: 222 SQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 253
S +FGG P++ +PGFTYPV+ YLEDVL++ +
Sbjct: 354 SGYFGGCPVVRVPGFTYPVRTLYLEDVLSILK 385
Score = 171 (65.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRT 303
+ D+L + L+LILMSATL+AE+FS +FGG P++ +PGFTYPV+ YLEDVL++ ++
Sbjct: 329 IRDLLP-SNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLYLEDVLSILKS 386
Score = 113 (44.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
GCGKTTQVPQ++LD + R + C I+ TQPRRISA+++
Sbjct: 213 GCGKTTQVPQYLLDHMWSSKRET-CKIVCTQPRRISAMSV 251
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 439 (159.6 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 90/183 (49%), Positives = 125/183 (68%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRG-SECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + G S+C I+ TQPRRISA+++A RV E + G
Sbjct: 589 VVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENG 648
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E +LYCT G+L +Q D +L+ VSH+++DE+HERS+
Sbjct: 649 PGGKNSLCGYQIRMESRASEST-RLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQ 707
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++
Sbjct: 708 SDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 767
Query: 250 NMT 252
T
Sbjct: 768 EET 770
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+++L R DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++ T
Sbjct: 715 LKEILQK-RSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEET 770
Score = 43 (20.2 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 255 DLKLILMSATLNAEKFSQFFG--GAPILHIPGFTYPVQEYYLEDVLNMTR 302
DL L L++ ++ QF GA ++ +PG + +Q+ Y D+L+ R
Sbjct: 845 DLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAH-IQQLY--DLLSTDR 891
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 439 (159.6 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 90/183 (49%), Positives = 125/183 (68%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRG-SECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + G S+C I+ TQPRRISA+++A RV E + G
Sbjct: 589 VVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENG 648
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E +LYCT G+L +Q D +L+ VSH+++DE+HERS+
Sbjct: 649 PGGKNSLCGYQIRMESRASEST-RLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQ 707
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++
Sbjct: 708 SDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 767
Query: 250 NMT 252
T
Sbjct: 768 EET 770
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+++L R DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++ T
Sbjct: 715 LKEILQK-RSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEET 770
Score = 43 (20.2 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 255 DLKLILMSATLNAEKFSQFFG--GAPILHIPGFTYPVQEYYLEDVLNMTR 302
DL L L++ ++ QF GA ++ +PG + +Q+ Y D+L+ R
Sbjct: 845 DLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAH-IQQLY--DLLSTDR 891
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 439 (159.6 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 90/183 (49%), Positives = 125/183 (68%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRG-SECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + G S+C I+ TQPRRISA+++A RV E + G
Sbjct: 589 VVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENG 648
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E +LYCT G+L +Q D +L+ VSH+++DE+HERS+
Sbjct: 649 PGGKNSLCGYQIRMESRASEST-RLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQ 707
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++
Sbjct: 708 SDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 767
Query: 250 NMT 252
T
Sbjct: 768 EET 770
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+++L R DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++ T
Sbjct: 715 LKEILQK-RSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEET 770
Score = 43 (20.2 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 255 DLKLILMSATLNAEKFSQFFG--GAPILHIPGFTYPVQEYYLEDVLNMTR 302
DL L L++ ++ QF GA ++ +PG + +Q+ Y D+L+ R
Sbjct: 845 DLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAH-IQQLY--DLLSTDR 891
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 452 (164.2 bits), Expect = 2.0e-41, P = 2.0e-41
Identities = 93/181 (51%), Positives = 127/181 (70%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTTQ+PQFILD+ + I+ TQPRRISAI++AERVA+ER E R
Sbjct: 515 VISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAE---R 571
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L GV+HI++DE+HER+ SDF
Sbjct: 572 VGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDF 630
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R L++ILMSATL+A FS++F P++ IPG +PV +++LED L +T
Sbjct: 631 LLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVT 690
Query: 253 R 253
R
Sbjct: 691 R 691
Score = 141 (54.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L+D++ M R L++ILMSATL+A FS++F P++ IPG +PV +++LED L +TR
Sbjct: 635 LKDIV-MQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 691
Score = 115 (45.5 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 17 LAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
+ GCGKTTQ+PQFILD+ + I+ TQPRRISAI++ +
Sbjct: 519 MTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAER 563
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 452 (164.2 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 93/181 (51%), Positives = 127/181 (70%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTTQ+PQFILD+ + I+ TQPRRISAI++AERVA+ER E R
Sbjct: 565 VISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAE---R 621
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L GV+HI++DE+HER+ SDF
Sbjct: 622 VGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDF 680
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R L++ILMSATL+A FS++F P++ IPG +PV +++LED L +T
Sbjct: 681 LLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVT 740
Query: 253 R 253
R
Sbjct: 741 R 741
Score = 141 (54.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L+D++ M R L++ILMSATL+A FS++F P++ IPG +PV +++LED L +TR
Sbjct: 685 LKDIV-MQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 741
Score = 115 (45.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 17 LAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
+ GCGKTTQ+PQFILD+ + I+ TQPRRISAI++ +
Sbjct: 569 MTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAER 613
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 452 (164.2 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 93/181 (51%), Positives = 127/181 (70%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TGCGKTTQ+PQFILD+ + I+ TQPRRISAI++AERVA+ER E R
Sbjct: 568 VISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAE---R 624
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGYQIRLE + +LYCT G+L ++ D L GV+HI++DE+HER+ SDF
Sbjct: 625 VGLTVGYQIRLES-VKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDF 683
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +LKD+ +R L++ILMSATL+A FS++F P++ IPG +PV +++LED L +T
Sbjct: 684 LLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVT 743
Query: 253 R 253
R
Sbjct: 744 R 744
Score = 141 (54.7 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
L+D++ M R L++ILMSATL+A FS++F P++ IPG +PV +++LED L +TR
Sbjct: 688 LKDIV-MQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTR 744
Score = 115 (45.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 17 LAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
+ GCGKTTQ+PQFILD+ + I+ TQPRRISAI++ +
Sbjct: 572 MTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAER 616
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 435 (158.2 bits), Expect = 3.1e-41, Sum P(2) = 3.1e-41
Identities = 89/183 (48%), Positives = 124/183 (67%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGS-ECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + G+ +C I+ TQPRRISA+++A RV E + G
Sbjct: 589 VVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCNIVCTQPRRISAVSLATRVCDELGCENG 648
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E +LYCT G+L +Q D +L+ VSH+++DE+HERS+
Sbjct: 649 PGGKNSLCGYQIRMESRASEST-RLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQ 707
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT++ EKFS +F PIL I G +YPV+ ++LED++
Sbjct: 708 SDFLLIILKEILQKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFHLEDII 767
Query: 250 NMT 252
T
Sbjct: 768 EET 770
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 29/57 (50%), Positives = 41/57 (71%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+++L R DL LILMSAT++ EKFS +F PIL I G +YPV+ ++LED++ T
Sbjct: 715 LKEILQK-RSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEET 770
Score = 45 (20.9 bits), Expect = 3.1e-41, Sum P(2) = 3.1e-41
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 249 LNMTRKDLKLILMSATLNAEKFSQFFG--GAPILHIPGFTYPVQEYYLEDVLNMTR 302
+N + +L LIL T ++ QF GA ++ +PG + +Q+ Y D+L+ R
Sbjct: 837 MNPHKINLDLILELLTY-LDRSPQFKNVEGAVLIFLPGLAH-IQQLY--DLLSTDR 888
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 438 (159.2 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 90/183 (49%), Positives = 125/183 (68%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRG-SECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + G S+C I+ TQPRRISA+++A RV E + G
Sbjct: 589 VVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENG 648
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E +LYCT G+L +Q D +L+ VSH+++DE+HERS+
Sbjct: 649 PGGRNSLCGYQIRMESRASEST-RLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQ 707
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++
Sbjct: 708 SDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIV 767
Query: 250 NMT 252
T
Sbjct: 768 EET 770
Score = 142 (55.0 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+++L R DL LILMSAT+++EKFS +F PIL I G +YPV+ ++LED++ T
Sbjct: 715 LKEILQK-RSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIVEET 770
Score = 113 (44.8 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRG-SECCIMVTQPRRISAIALINK 61
G GK+TQVP F+L+D + G S+C I+ TQPRRISA++L +
Sbjct: 595 GSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATR 638
Score = 40 (19.1 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 255 DLKLILMSATLNAEKFSQF--FGGAPILHIPGFTYPVQEYYLEDVLNMTR 302
DL L L+ ++ QF GA ++ +PG + +Q+ Y D+L+ R
Sbjct: 845 DLILELLIYLEIPDRSPQFRNIEGAVLIFLPGLAH-IQQLY--DLLSTDR 891
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 438 (159.2 bits), Expect = 7.3e-40, P = 7.3e-40
Identities = 95/200 (47%), Positives = 134/200 (67%)
Query: 61 KCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAE 120
KCL + ++ +I TGCGK+TQ+PQ+IL+ I++ +GSEC I+ TQPRRISAI +AE
Sbjct: 636 KCLQENQVV---VITAETGCGKSTQIPQYILESFISQEKGSECNIVCTQPRRISAIGVAE 692
Query: 121 RVAQERDEQCGRP----GSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVS 176
RV+ E + CG G VGYQIR E + + +L+CT GIL + +S +S
Sbjct: 693 RVSYEWN--CGTVENSIGGLVGYQIRNESKRSQST-RLLFCTTGILLRRILDVSNISDLS 749
Query: 177 HIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAP--ILHIP 234
HI++DE+HERS +DFLL IL+++ KRKDLK+ILMSATLNA++ + +F I IP
Sbjct: 750 HIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYFKCTDDSIFSIP 809
Query: 235 GFTYPVQEYYLEDVLNMTRK 254
GFT+PV+ Y+ +VL + K
Sbjct: 810 GFTFPVKNIYINEVLPLINK 829
Score = 140 (54.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+PQ+IL+ I++ +GSEC I+ TQPRRISAI + +
Sbjct: 651 GCGKSTQIPQYILESFISQEKGSECNIVCTQPRRISAIGVAER 693
Score = 128 (50.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAP--ILHIPGFTYPVQEYYLEDVL 298
L ++++ RKDLK+ILMSATLNA++ + +F I IPGFT+PV+ Y+ +VL
Sbjct: 770 LREIISK-RKDLKIILMSATLNAKQIANYFKCTDDSIFSIPGFTFPVKNIYINEVL 824
Score = 42 (19.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 56 IALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPR 111
+ LINK +P SI T+T TT ++EI N+ ++ I + Q R
Sbjct: 824 LPLINK---YNPNYKDSITTTTTTTTTTTTNDTNEDEEEILNNKLNQLKISIDQKR 876
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 436 (158.5 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/184 (48%), Positives = 128/184 (69%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGS-ECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + + G+ +C I+ TQPRRISA+++A RV +E + G
Sbjct: 592 VVAGETGSGKSTQVPHFLLEDLLLNDCGARKCNIVCTQPRRISAVSLATRVCEELGCE-G 650
Query: 132 RPG---SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSM 188
PG S GYQIR+E +LYCT G+L +Q D +L+ VSH+++DE+HERS+
Sbjct: 651 GPGGRNSLCGYQIRMESRASEST-RLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSV 709
Query: 189 ISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDV 248
SDFLL ILK++ KR DL LILMSAT++++KFS +F PIL I G +YPV+ ++LED+
Sbjct: 710 QSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDI 769
Query: 249 LNMT 252
+ T
Sbjct: 770 VEET 773
Score = 140 (54.3 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L+++L R DL LILMSAT++++KFS +F PIL I G +YPV+ ++LED++ T +
Sbjct: 718 LKEILQK-RSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFI 776
Query: 305 KRSETQ 310
+++
Sbjct: 777 LEKDSE 782
Score = 111 (44.1 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 19 GCGKTTQVPQFILDDEIARNRGS-ECCIMVTQPRRISAIALINK 61
G GK+TQVP F+L+D + + G+ +C I+ TQPRRISA++L +
Sbjct: 598 GSGKSTQVPHFLLEDLLLNDCGARKCNIVCTQPRRISAVSLATR 641
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 434 (157.8 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 88/183 (48%), Positives = 126/183 (68%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGS-ECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GK+TQVP F+L+D + G+ +C I+ TQPRRISA+++A RV +E + G
Sbjct: 591 VVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESG 650
Query: 132 RPG--SSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S GYQIR+E +LYCT G+L +Q D +L+ VSH+++DE+HERS+
Sbjct: 651 PGGRNSLCGYQIRMESRASEST-RLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQ 709
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL ILK++ KR DL LILMSAT++++KFS +F PIL I G +YPV+ ++LED++
Sbjct: 710 SDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIV 769
Query: 250 NMT 252
T
Sbjct: 770 EET 772
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+++L R DL LILMSAT++++KFS +F PIL I G +YPV+ ++LED++ T
Sbjct: 717 LKEILQK-RSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEET 772
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 431 (156.8 bits), Expect = 4.3e-39, P = 4.3e-39
Identities = 85/183 (46%), Positives = 128/183 (69%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDE---Q 129
I+ TGCGK+TQVP F+L+ ++A+ G C I T+PRRISAI++A RV++E E
Sbjct: 711 IVCGETGCGKSTQVPSFLLEHQLAQ--GKACKIYCTEPRRISAISLARRVSEELGEGRND 768
Query: 130 CGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G S VGY IRLE R+ +++ T GI+ +++ L ++H+V+DE+HERS+
Sbjct: 769 LGTSRSLVGYSIRLEANTSRET-RLVFATTGIVMRMLEGSNDLRDITHLVLDEVHERSID 827
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
SDFLL +LK + +RKDLK++LMSAT++A++FS + GAP+L++PG T+PVQ +LED +
Sbjct: 828 SDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLDGAPVLNVPGRTFPVQVNFLEDAV 887
Query: 250 NMT 252
+T
Sbjct: 888 ELT 890
Score = 158 (60.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 29/52 (55%), Positives = 43/52 (82%)
Query: 251 MTR-KDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
MTR KDLK++LMSAT++A++FS + GAP+L++PG T+PVQ +LED + +T
Sbjct: 839 MTRRKDLKVVLMSATVDADRFSNYLDGAPVLNVPGRTFPVQVNFLEDAVELT 890
Score = 118 (46.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVP F+L+ ++A+ G C I T+PRRISAI+L +
Sbjct: 717 GCGKSTQVPSFLLEHQLAQ--GKACKIYCTEPRRISAISLARR 757
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 424 (154.3 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 89/183 (48%), Positives = 124/183 (67%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQC-G 131
++ TG GKTTQVPQFILDD I G C I+ TQPRRI+AI++A+RVA ER E G
Sbjct: 634 VVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPG 693
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
S VGYQ+RLE K +L+CT GIL + D L+ V+HI++DE+HERS++ D
Sbjct: 694 LDDSLVGYQVRLESARSDKT-RLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGD 752
Query: 192 FLLAILKDVTDKR------KDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYL 245
FLL ILK + +K+ + LK+ILMSAT++A+ FS++FG P++ G T+PV ++L
Sbjct: 753 FLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFL 812
Query: 246 EDV 248
E++
Sbjct: 813 EEI 815
Score = 129 (50.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQVPQFILDD I G C I+ TQPRRI+AI++ +
Sbjct: 640 GSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQR 682
Score = 119 (46.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 250 NMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDV 297
N +RK LK+ILMSAT++A+ FS++FG P++ G T+PV ++LE++
Sbjct: 769 NTSRK-LKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEI 815
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 419 (152.6 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 92/185 (49%), Positives = 124/185 (67%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TGCGKTTQVPQFILD+ A +MVTQPRRI+AI+IAERVA+ER E GR
Sbjct: 201 IISGGTGCGKTTQVPQFILDE--AHENNKHVRVMVTQPRRIAAISIAERVARERGEPIGR 258
Query: 133 PGSSVGYQIRLEKELPRKRGSIL-YCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+VGYQ+RL+ R ++L YCT G+L ++ SDP+ SG++HIVMDEIHER + +D
Sbjct: 259 ---TVGYQVRLDSR--RSDDTVLTYCTTGVLLRMLTSDPVASGITHIVMDEIHEREINTD 313
Query: 192 FLLAILKDVTDKRKDLKLILMSATL--NAEKFSQFFGG--APILHIPGFTYPVQEYYLED 247
+LL L++ R DLK+ILMSAT+ N + FS +F ++ I + V+ +YL+
Sbjct: 314 YLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFENHSMDVIRIESRAFDVKVFYLDQ 373
Query: 248 VLNMT 252
+L MT
Sbjct: 374 ILAMT 378
Score = 124 (48.7 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQFILD+ A +MVTQPRRI+AI++ +
Sbjct: 207 GCGKTTQVPQFILDE--AHENNKHVRVMVTQPRRIAAISIAER 247
Score = 92 (37.4 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 245 LEDVLNMTRKDLKLILMSATL--NAEKFSQFFGG--APILHIPGFTYPVQEYYLEDVLNM 300
L + L M R DLK+ILMSAT+ N + FS +F ++ I + V+ +YL+ +L M
Sbjct: 319 LRECLKM-RPDLKVILMSATIEGNMQLFSNYFENHSMDVIRIESRAFDVKVFYLDQILAM 377
Query: 301 T 301
T
Sbjct: 378 T 378
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 418 (152.2 bits), Expect = 8.2e-38, P = 8.2e-38
Identities = 90/233 (38%), Positives = 148/233 (63%)
Query: 25 QVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSP-SIIYTSTGCGKT 83
Q+ Q I++ E + RG E +T R +A + + + + ++I TGCGK+
Sbjct: 354 QISQRIMEKEDFK-RG-EALDKITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKS 411
Query: 84 TQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRL 143
TQV QF+L+ + + G+ +V+QPRRISAI++AERVA ER E+ G + GY +R
Sbjct: 412 TQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVGE---TCGYNVRF 468
Query: 144 EKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDK 203
+ PR GSI++CT G+L +M++ L G+SH+++DEIHER + +DF+L +L+++
Sbjct: 469 DSATPRPYGSIMFCTVGVLLRMMENG--LRGISHVIIDEIHERDVDTDFVLIVLREMIST 526
Query: 204 RKDLKLILMSATLNAEKFSQFF------GGAPILHIPGFTYPVQEYYLEDVLN 250
+DL+++LMSAT++ + F+ FF G P++ + G T+PVQ +YLED+L+
Sbjct: 527 YRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYLEDILH 579
Score = 121 (47.7 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFF------GGAPILHIPGFTYPVQEYYLEDVL 298
L ++++ T +DL+++LMSAT++ + F+ FF G P++ + G T+PVQ +YLED+L
Sbjct: 520 LREMIS-TYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYLEDIL 578
Query: 299 NMTRTLKRSETQQ 311
+ + + Q+
Sbjct: 579 HNLQHMPEEPDQK 591
Score = 109 (43.4 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQV QF+L+ + + G+ +V+QPRRISAI+L +
Sbjct: 407 GCGKSTQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAER 449
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 411 (149.7 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 88/181 (48%), Positives = 119/181 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD +N G C I TQPRR++AIA+AERVA ER E R
Sbjct: 213 LIVGETGSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAERVAAERRE---R 267
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
G ++GYQIRLE + K + +CT G+L +M D LS V+H+++DE+HER SD
Sbjct: 268 IGQTIGYQIRLESRVSPKT-LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSD 326
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL L+D+ K LKLIL SA L+ F ++FG P+++I G + V+E +LED+L
Sbjct: 327 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRT 386
Query: 252 T 252
T
Sbjct: 387 T 387
Score = 118 (46.6 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L D+L LKLIL SA L+ F ++FG P+++I G + V+E +LED+L T
Sbjct: 332 LRDLLQK-HPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYT 390
Query: 305 KRSETQQYPNDQQ 317
+ E +Y ++Q
Sbjct: 391 NK-EMLKYKKEKQ 402
Score = 113 (44.8 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+LDD +N G C I TQPRR++AIA+ +
Sbjct: 219 GSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAER 259
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 416 (151.5 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 83/185 (44%), Positives = 129/185 (69%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II + TG GK+TQ+P FIL+ E+ R C I VT+PRRISAI++A RV++E E
Sbjct: 665 IICSETGSGKSTQIPSFILEHEMLSGR--PCKIYVTEPRRISAISLARRVSEELGESKND 722
Query: 133 PGSS---VGYQIRLEKEL-PRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSM 188
G+S +G+ +RLE ++ P R +++ T G++ +++ ++H+V+DE+HERS+
Sbjct: 723 VGTSRSLIGFAVRLESKVSPATR--LVFATTGVVVRMLERPDDFQDITHVVLDEVHERSI 780
Query: 189 ISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDV 248
SDFLL +L+ + KR+DLKLILMSAT++A +FS + GG P+L+IPG T+PV+ +LED
Sbjct: 781 DSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGGVPVLNIPGRTFPVETKFLEDA 840
Query: 249 LNMTR 253
+ +T+
Sbjct: 841 IELTQ 845
Score = 162 (62.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 249 LNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSE 308
L R+DLKLILMSAT++A +FS + GG P+L+IPG T+PV+ +LED + +T+ + +E
Sbjct: 792 LMQKRQDLKLILMSATVDANRFSTYLGGVPVLNIPGRTFPVETKFLEDAIELTQ-YRTTE 850
Query: 309 TQQYPNDQQH 318
+ D ++
Sbjct: 851 NESNVADDEY 860
Score = 108 (43.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ+P FIL+ E+ R C I VT+PRRISAI+L +
Sbjct: 671 GSGKSTQIPSFILEHEMLSGR--PCKIYVTEPRRISAISLARR 711
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 415 (151.1 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 87/181 (48%), Positives = 119/181 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD G C I TQPRR++ IA+AERVA ER E+ G+
Sbjct: 123 LIVGETGSGKTTQIPQFLLDD--CYENGVPCRIFCTQPRRLAVIAVAERVAAERREKVGQ 180
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
+VGYQIRLE + R + +CT GIL +M D LS V+H+++DE+HER SD
Sbjct: 181 ---TVGYQIRLESRVS-PRTLLTFCTNGILLRTLMAGDSALSTVTHVIVDEVHERDRFSD 236
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL L+D+ + +LKLI+ SA L+A F ++FG P++HI G + V+E +LED+L
Sbjct: 237 FLLIKLRDILQNQTNLKLIISSAALDANLFIKYFGSCPVIHIQGRPFEVKEMFLEDILRS 296
Query: 252 T 252
T
Sbjct: 297 T 297
Score = 131 (51.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L D+L + +LKLI+ SA L+A F ++FG P++HI G + V+E +LED+L T
Sbjct: 242 LRDILQ-NQTNLKLIISSAALDANLFIKYFGSCPVIHIQGRPFEVKEMFLEDILRSTGYT 300
Query: 305 KRSETQQYPNDQQ 317
+ E +Y ++Q
Sbjct: 301 NK-EMIKYKKEKQ 312
Score = 109 (43.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+LDD G C I TQPRR++ IA+ +
Sbjct: 129 GSGKTTQIPQFLLDD--CYENGVPCRIFCTQPRRLAVIAVAER 169
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 411 (149.7 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 88/181 (48%), Positives = 119/181 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD +N G C I TQPRR++AIA+AERVA ER E R
Sbjct: 212 LIVGETGSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAERVAAERRE---R 266
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
G ++GYQIRLE + K + +CT G+L +M D LS V+H+++DE+HER SD
Sbjct: 267 IGQTIGYQIRLESRVSPKT-LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSD 325
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL L+D+ K LKLIL SA L+ F ++FG P+++I G + V+E +LED+L
Sbjct: 326 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRT 385
Query: 252 T 252
T
Sbjct: 386 T 386
Score = 118 (46.6 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L D+L LKLIL SA L+ F ++FG P+++I G + V+E +LED+L T
Sbjct: 331 LRDLLQK-HPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYT 389
Query: 305 KRSETQQYPNDQQ 317
+ E +Y ++Q
Sbjct: 390 NK-EMLKYKKEKQ 401
Score = 113 (44.8 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+LDD +N G C I TQPRR++AIA+ +
Sbjct: 218 GSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAER 258
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 411 (149.7 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 91/206 (44%), Positives = 131/206 (63%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARN---RGSECCI 105
Q + + A A+ N LT +I+ TG GKTTQ+ QF+ +D N G + I
Sbjct: 354 QRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEKRII 413
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEV 165
TQPRR++A+++A+RV++E + C + G VGY IR E + K+ I Y T GIL
Sbjct: 414 ACTQPRRVAAMSVAKRVSEEMN--C-KLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLRE 470
Query: 166 MQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF 225
+ +DP+L+ S I+MDE HERS+ +D LL + K++ KRKDLKLI+ SAT+NA +F++FF
Sbjct: 471 ILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFF 530
Query: 226 GGAPILHIPGFTYPVQEYYLEDVLNM 251
G AP HIPG T+PV+ ++ DV NM
Sbjct: 531 GVAPQFHIPGRTFPVEVFFNRDV-NM 555
Score = 147 (56.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 300
RKDLKLI+ SAT+NA +F++FFG AP HIPG T+PV+ ++ DV NM
Sbjct: 509 RKDLKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDV-NM 555
Score = 85 (35.0 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 19 GCGKTTQVPQFILDDEIARN---RGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ QF+ +D N G + I TQPRR++A+++ +
Sbjct: 384 GSGKTTQLTQFLYEDGFGANIDKNGEKRIIACTQPRRVAAMSVAKR 429
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 412 (150.1 bits), Expect = 4.0e-37, P = 4.0e-37
Identities = 87/181 (48%), Positives = 118/181 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD +N G C I TQPRR++AIA+AERVA ER E R
Sbjct: 212 LIVGETGSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAERVAAERRE---R 266
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
G ++GYQIRLE + + +CT G+L +M D LS V+H+++DE+HER SD
Sbjct: 267 IGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSD 326
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL L+D+ K LKLIL SA L+ F ++FG P+++I G + V+E +LED+L
Sbjct: 327 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRT 386
Query: 252 T 252
T
Sbjct: 387 T 387
Score = 118 (46.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L D+L LKLIL SA L+ F ++FG P+++I G + V+E +LED+L T
Sbjct: 332 LRDLLQK-HPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYT 390
Query: 305 KRSETQQYPNDQQ 317
+ E +Y ++Q
Sbjct: 391 NK-EMLKYKKEKQ 402
Score = 113 (44.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+LDD +N G C I TQPRR++AIA+ +
Sbjct: 218 GSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAER 258
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 411 (149.7 bits), Expect = 5.4e-37, P = 5.4e-37
Identities = 88/181 (48%), Positives = 119/181 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD +N G C I TQPRR++AIA+AERVA ER E R
Sbjct: 212 LIVGETGSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAERVAAERRE---R 266
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
G ++GYQIRLE + K + +CT G+L +M D LS V+H+++DE+HER SD
Sbjct: 267 IGQTIGYQIRLESRVSPKT-LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSD 325
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL L+D+ K LKLIL SA L+ F ++FG P+++I G + V+E +LED+L
Sbjct: 326 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRT 385
Query: 252 T 252
T
Sbjct: 386 T 386
Score = 118 (46.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L D+L LKLIL SA L+ F ++FG P+++I G + V+E +LED+L T
Sbjct: 331 LRDLLQK-HPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYT 389
Query: 305 KRSETQQYPNDQQ 317
+ E +Y ++Q
Sbjct: 390 NK-EMLKYKKEKQ 401
Score = 113 (44.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+LDD +N G C I TQPRR++AIA+ +
Sbjct: 218 GSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAER 258
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 411 (149.7 bits), Expect = 5.4e-37, P = 5.4e-37
Identities = 88/181 (48%), Positives = 119/181 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD +N G C I TQPRR++AIA+AERVA ER E R
Sbjct: 213 LIVGETGSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAERVAAERRE---R 267
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
G ++GYQIRLE + K + +CT G+L +M D LS V+H+++DE+HER SD
Sbjct: 268 IGQTIGYQIRLESRVSPKT-LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSD 326
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL L+D+ K LKLIL SA L+ F ++FG P+++I G + V+E +LED+L
Sbjct: 327 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRT 386
Query: 252 T 252
T
Sbjct: 387 T 387
Score = 118 (46.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L D+L LKLIL SA L+ F ++FG P+++I G + V+E +LED+L T
Sbjct: 332 LRDLLQK-HPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYT 390
Query: 305 KRSETQQYPNDQQ 317
+ E +Y ++Q
Sbjct: 391 NK-EMLKYKKEKQ 402
Score = 113 (44.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+LDD +N G C I TQPRR++AIA+ +
Sbjct: 219 GSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAER 259
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 411 (149.7 bits), Expect = 5.5e-37, P = 5.5e-37
Identities = 88/181 (48%), Positives = 119/181 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD +N G C I TQPRR++AIA+AERVA ER E R
Sbjct: 228 LIVGETGSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAERVAAERRE---R 282
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
G ++GYQIRLE + K + +CT G+L +M D LS V+H+++DE+HER SD
Sbjct: 283 IGQTIGYQIRLESRVSPKT-LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSD 341
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNM 251
FLL L+D+ K LKLIL SA L+ F ++FG P+++I G + V+E +LED+L
Sbjct: 342 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRT 401
Query: 252 T 252
T
Sbjct: 402 T 402
Score = 118 (46.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTL 304
L D+L LKLIL SA L+ F ++FG P+++I G + V+E +LED+L T
Sbjct: 347 LRDLLQK-HPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYT 405
Query: 305 KRSETQQYPNDQQ 317
+ E +Y ++Q
Sbjct: 406 NK-EMLKYKKEKQ 417
Score = 113 (44.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+LDD +N G C I TQPRR++AIA+ +
Sbjct: 234 GSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAER 274
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 397 (144.8 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 81/176 (46%), Positives = 113/176 (64%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TGCGKTTQ+PQF+++D I C I++TQPRRIS + AER+A ER E+ G
Sbjct: 737 IIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNIVMTQPRRISVLGAAERMAYERLEKVG- 795
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+VGYQIR + P +L CT GIL + M SD L VSH+ +DE+HER + +DF
Sbjct: 796 --DTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYSDMKLHNVSHLFIDEVHERDIHTDF 853
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDV 248
LL ILK + +L++ILMSAT++ S +FG P++ + + + QEY+LED+
Sbjct: 854 LLIILKKLLADNNNLRVILMSATMDNSLVSAYFGTCPVIKLTSYHHIAQEYFLEDI 909
Score = 120 (47.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAI 56
GCGKTTQ+PQF+++D I C I++TQPRRIS +
Sbjct: 743 GCGKTTQIPQFVIEDMIDSGHAPYCNIVMTQPRRISVL 780
Score = 101 (40.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 255 DLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSETQQYPN 314
+L++ILMSAT++ S +FG P++ + + + QEY+LED+ S + +
Sbjct: 867 NLRVILMSATMDNSLVSAYFGTCPVIKLTSYHHIAQEYFLEDISKQLNDPTISYRDEQSD 926
Query: 315 DQQH 318
D H
Sbjct: 927 DVDH 930
Score = 41 (19.5 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 64 TLSPILSPSIIYTS 77
T+ P+ SPS YTS
Sbjct: 310 TIPPVESPSFRYTS 323
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 390 (142.3 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 95/221 (42%), Positives = 139/221 (62%)
Query: 46 MVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCI 105
M+ Q +++ A L ++ + +II TG GK+TQ QFILDD R G I
Sbjct: 626 MLGQRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANI 685
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKEL-PRKRGSILYCTAGILPE 164
+VTQPRRISA+ +A+RV+ DE+C + G VGY IR E P+ R I + T G+L
Sbjct: 686 LVTQPRRISALGLADRVS---DERCSQVGQEVGYIIRGESRTGPKTR--ITFVTTGVLLR 740
Query: 165 VMQ------SDPI--LSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATL 216
+Q D + L+ VSH+V+DE+HERS+ +DFLL+I++DV +R+DLKL+LMSATL
Sbjct: 741 RLQVSGGRVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATL 800
Query: 217 NAEKFSQFF--GGAPI--LHIPGFTYPVQEYYLEDVLNMTR 253
++ F+ +F G + + I G T+PV +YYL+DV+ MT+
Sbjct: 801 DSATFASYFVQDGIRVGQVEIAGRTFPVTDYYLDDVIRMTQ 841
Score = 131 (51.2 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFF--GGAPI--LHIPGFTYPVQEYYLEDVLNM 300
+ DVL R+DLKL+LMSATL++ F+ +F G + + I G T+PV +YYL+DV+ M
Sbjct: 781 IRDVLKQ-RRDLKLVLMSATLDSATFASYFVQDGIRVGQVEIAGRTFPVTDYYLDDVIRM 839
Query: 301 TR 302
T+
Sbjct: 840 TQ 841
Score = 111 (44.1 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ QFILDD R G I+VTQPRRISA+ L ++
Sbjct: 659 GSGKSTQSVQFILDDLYGRGLGHAANILVTQPRRISALGLADR 701
Score = 38 (18.4 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 21 GKTTQVPQFILDDEIAR 37
G+ ++P ++L DEI R
Sbjct: 628 GQRQKLPAWLLRDEIVR 644
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 393 (143.4 bits), Expect = 4.4e-35, P = 4.4e-35
Identities = 89/188 (47%), Positives = 119/188 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQC-G 131
++ TG GKTTQVPQFILDD I G C I+ TQPR AI +A+RVA ER E G
Sbjct: 617 VVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPR---AITVAQRVADERCEPPPG 673
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
S V YQ+R + K +L+CT GIL + D L V+HI++DE+HERS++ D
Sbjct: 674 FDNSVVAYQVRHQNARSDKT-RLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGD 732
Query: 192 FLLAILKDVTDKRK-D-----LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYL 245
FLL ILK + +K+ D LK+ILMSAT++A +FS++FG PI+ G T+PV Y+L
Sbjct: 733 FLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFL 792
Query: 246 EDVLNMTR 253
ED+ T+
Sbjct: 793 EDIYERTK 800
Score = 134 (52.2 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTRTLKRSET 309
LK+ILMSAT++A +FS++FG PI+ G T+PV Y+LED+ T+ L S++
Sbjct: 754 LKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDS 807
Score = 112 (44.5 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 23/36 (63%), Positives = 25/36 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRIS 54
G GKTTQVPQFILDD I G C I+ TQPR I+
Sbjct: 623 GSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRAIT 658
Score = 42 (19.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 175 VSHIVMDEIHERSMISDFLLAILKDVT 201
V+ V+D++HE F + D+T
Sbjct: 290 VASSVLDDVHESVNADAFFFQLFDDLT 316
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 380 (138.8 bits), Expect = 3.0e-34, P = 3.0e-34
Identities = 80/168 (47%), Positives = 113/168 (67%)
Query: 78 TGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSV 137
TG GKTTQ+PQF+L DE+ ++ + TQPRR++A+++A+RVA+E D + G V
Sbjct: 118 TGSGKTTQIPQFVLFDEMPHLENTQ--VACTQPRRVAAMSVAQRVAEEMDVKLGE---EV 172
Query: 138 GYQIRLEKELPRKRGSIL-YCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAI 196
GY IR E + K +IL Y T G+L D LS S I++DE HER++ +D L+ +
Sbjct: 173 GYSIRFENKTSNK--TILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGL 230
Query: 197 LKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LK V +R DLK+I+MSATL+AEKF ++F AP+L +PG TYPV+ YY
Sbjct: 231 LKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYY 278
Score = 143 (55.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R DLK+I+MSATL+AEKF ++F AP+L +PG TYPV+ YY
Sbjct: 238 RPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYY 278
Score = 96 (38.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+L DE+ ++ + TQPRR++A+++ +
Sbjct: 119 GSGKTTQIPQFVLFDEMPHLENTQ--VACTQPRRVAAMSVAQR 159
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 378 (138.1 bits), Expect = 4.2e-34, P = 4.2e-34
Identities = 76/177 (42%), Positives = 113/177 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARN--RGSECCIMVTQPRRISAIAIAERVAQERDEQC 130
I+ TG GKTTQ+PQF+LD +A N +G + + TQPRR++A++++ RVA E D
Sbjct: 85 ILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSI 144
Query: 131 GRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMIS 190
G VGY IR E + R + Y T G+L +DP+L I++DE HER++ +
Sbjct: 145 GE---EVGYSIRFE-DCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLAT 200
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
D L +LK+V R DLKL++MSATL AEKF ++F GAP++ +PG +PV+ +Y ++
Sbjct: 201 DVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQE 257
Score = 143 (55.4 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
L++VL R DLKL++MSATL AEKF ++F GAP++ +PG +PV+ +Y ++
Sbjct: 207 LKEVLR-NRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQE 257
Score = 103 (41.3 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 19 GCGKTTQVPQFILDDEIARN--RGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQF+LD +A N +G + + TQPRR++A+++
Sbjct: 91 GSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSV 132
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 375 (137.1 bits), Expect = 8.8e-34, P = 8.8e-34
Identities = 79/175 (45%), Positives = 115/175 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+PQF++D + R G + VTQPRR++AI++A+RV++E D + G
Sbjct: 97 ILVGETGSGKTTQIPQFVVDAGLIRP-GK--MVGVTQPRRVAAISVAKRVSEEMDFELGE 153
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E EL R + Y T G+L SDP L+ I++DE HER++ +D
Sbjct: 154 ---EVGYSIRFE-ELSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDI 209
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L ++KD+ +RKDLKLI+MSATL A KF ++F AP++ +PG +PV+ +Y E+
Sbjct: 210 LFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEE 264
Score = 137 (53.3 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
++D+L RKDLKLI+MSATL A KF ++F AP++ +PG +PV+ +Y E+
Sbjct: 214 IKDILKR-RKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEE 264
Score = 93 (37.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF++D + R G + VTQPRR++AI++ +
Sbjct: 103 GSGKTTQIPQFVVDAGLIRP-GK--MVGVTQPRRVAAISVAKR 142
>RGD|1563192 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001374
InterPro:IPR011545 Pfam:PF00270 Pfam:PF01424 PROSITE:PS51061
RGD:1563192 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00700000104393
GO:GO:0008026 OrthoDB:EOG4JWVCN IPI:IPI00367844 RefSeq:XP_225959.5
Ensembl:ENSRNOT00000060098 UCSC:RGD:1563192 NextBio:657385
Uniprot:D3ZIV8
Length = 394
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 79/161 (49%), Positives = 106/161 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+LDD +N G C I TQPRR++AIA+AERVA ER E R
Sbjct: 217 LIVGETGSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAERVAAERRE---R 271
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPE-VMQSDPILSGVSHIVMDEIHERSMISD 191
G ++GYQIRLE + K + +CT G+L +M D LS V+H+++DE+HER SD
Sbjct: 272 IGQTIGYQIRLESRVSPKT-LLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSD 330
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILH 232
FLL L+D+ K LKLIL SA L+ F ++FG P+++
Sbjct: 331 FLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIY 371
Score = 113 (44.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+LDD +N G C I TQPRR++AIA+ +
Sbjct: 223 GSGKTTQIPQFLLDD-CFKN-GIPCRIFCTQPRRLAAIAVAER 263
Score = 68 (29.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILH 281
L D+L LKLIL SA L+ F ++FG P+++
Sbjct: 336 LRDLLQK-HPTLKLILSSAALDVNLFIRYFGSCPVIY 371
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 367 (134.2 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 82/185 (44%), Positives = 118/185 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GK+TQV QFILD ++ ++ TQPRRISAI++AERVA ERD G+
Sbjct: 597 VISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGK 656
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPI--LSGVSHIVMDEIHERSMIS 190
VGY + EK + K + +CT G+L +Q + LS +S +V+DE+HERS+ +
Sbjct: 657 ---EVGYSVHGEKSIS-KETLLEFCTTGLLLRRIQQHGLGFLSTLSCVVVDEVHERSIEN 712
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 250
D LL +LK V + +LK+ILMSAT+N++ F +FG A LHI G T+P+++YY+ED
Sbjct: 713 DILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYIEDFAP 772
Query: 251 MTRKD 255
+D
Sbjct: 773 KLNED 777
Score = 130 (50.8 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 255 DLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
+LK+ILMSAT+N++ F +FG A LHI G T+P+++YY+ED
Sbjct: 728 NLKVILMSATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYIED 769
Score = 96 (38.9 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQV QFILD ++ ++ TQPRRISAI+L +
Sbjct: 603 GSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAISLAER 645
Score = 39 (18.8 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 13/61 (21%), Positives = 29/61 (47%)
Query: 14 KEDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSI 73
K+ + G T ++P +L++ R++ + + V Q + + I + L +PSI
Sbjct: 55 KQLVGGSSWTGKIPVVLLNEHCQRSKWEKSDVKVRQTKSKNYI-FTSVVLAKKDPKNPSI 113
Query: 74 I 74
+
Sbjct: 114 L 114
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 366 (133.9 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 79/168 (47%), Positives = 110/168 (65%)
Query: 78 TGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSV 137
TG GKTTQ+PQF+L DE+ G + + TQPRR++A+++A RVA E D + G V
Sbjct: 119 TGSGKTTQIPQFVLYDEMPHLTGKQ--VACTQPRRVAAMSVAARVADEMDVELGE---EV 173
Query: 138 GYQIRLEKELPRKRGSIL-YCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAI 196
GY IR E K +IL Y T G+L D L+ S I++DE HER++ +D L+ +
Sbjct: 174 GYNIRFENNSGPK--TILKYMTDGMLLREAMEDHDLTRYSCIILDEAHERTLATDILMGL 231
Query: 197 LKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LK V+ +R DLK+I+MSATL+AEKF +F AP+L +PG T+PV+ YY
Sbjct: 232 LKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYY 279
Score = 140 (54.3 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 249 LNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
+++ R DLK+I+MSATL+AEKF +F AP+L +PG T+PV+ YY
Sbjct: 235 VSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYY 279
Score = 99 (39.9 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQF+L DE+ G + + TQPRR++A+++
Sbjct: 120 GSGKTTQIPQFVLYDEMPHLTGKQ--VACTQPRRVAAMSV 157
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 363 (132.8 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 77/172 (44%), Positives = 114/172 (66%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GK+TQ+PQF+ + A+ E C+ +TQPRR++A+ +A+RVA E+ C R
Sbjct: 116 VVVGETGSGKSTQIPQFLNECPYAQ----EGCVAITQPRRVAAVNLAKRVAAEQG--C-R 168
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR + + K+ I Y T G+L + +DPILS +++DE HER++++D
Sbjct: 169 LGEQVGYSIRFD-DTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDM 227
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LL +K + KR L++I+MSATLNAE+FS+FF GA I +I G YPVQ +Y
Sbjct: 228 LLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHY 279
Score = 129 (50.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYL----EDVLNMT-RTLKRS 307
R L++I+MSATLNAE+FS+FF GA I +I G YPVQ +Y D L+ RT+ +
Sbjct: 239 RPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQL 298
Query: 308 ETQQYPND 315
T+ P D
Sbjct: 299 HTKLPPGD 306
Score = 91 (37.1 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ+PQF+ + A+ E C+ +TQPRR++A+ L +
Sbjct: 122 GSGKSTQIPQFLNECPYAQ----EGCVAITQPRRVAAVNLAKR 160
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 362 (132.5 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 72/172 (41%), Positives = 113/172 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GKTTQ+PQ+ +D +++ R C TQPRR++A+++A+RV++E D + G
Sbjct: 92 VLVGETGSGKTTQIPQWCVDFAVSKGRKGVSC---TQPRRVAAMSVAQRVSEEMDVKLGE 148
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + + + Y T G+L SDP+L I++DE HER++ +D
Sbjct: 149 ---EVGYSIRFE-DCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDI 204
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLKL++MSATL+A KF Q+F AP++ +PG T+PV+ +Y
Sbjct: 205 LMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFY 256
Score = 135 (52.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLKL++MSATL+A KF Q+F AP++ +PG T+PV+ +Y
Sbjct: 209 LKEVIRQ-RSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFY 256
Score = 90 (36.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQ+ +D +++ R C TQPRR++A+++ +
Sbjct: 98 GSGKTTQIPQWCVDFAVSKGRKGVSC---TQPRRVAAMSVAQR 137
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 362 (132.5 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 76/176 (43%), Positives = 115/176 (65%)
Query: 73 IIYTS-TGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
I++ TG GKTTQ+PQF+L DE+ ++ I TQPRR++A+++A+RVA E D G
Sbjct: 94 IVFVGETGSGKTTQIPQFVLYDELPHLTNTQ--IACTQPRRVAAMSVAKRVADEMDVDLG 151
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
VGY IR E + + Y T G+L +D +LS S I++DE HER++ +D
Sbjct: 152 E---EVGYNIRFE-DCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATD 207
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L+ ++K + +R DLK+I+MSATL+A+KF ++F AP+L +PG TYPV+ YY ++
Sbjct: 208 ILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQE 263
Score = 142 (55.0 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE----DVLNMT-RTLKRS 307
R DLK+I+MSATL+A+KF ++F AP+L +PG TYPV+ YY + D L RT+ +
Sbjct: 220 RPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQI 279
Query: 308 ETQQYPND 315
++ P D
Sbjct: 280 HVEEGPGD 287
Score = 97 (39.2 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+L DE+ ++ I TQPRR++A+++ +
Sbjct: 101 GSGKTTQIPQFVLYDELPHLTNTQ--IACTQPRRVAAMSVAKR 141
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 362 (132.5 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 75/167 (44%), Positives = 112/167 (67%)
Query: 78 TGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSV 137
TG GKTTQ+PQF+L D++ + + I TQPRR++A+++A+RVA E D G V
Sbjct: 124 TGSGKTTQIPQFVLLDDLPQTQRK--MIACTQPRRVAAMSVAQRVAAELDVTLGE---EV 178
Query: 138 GYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAIL 197
GY IR E ++ + + Y T G+L +D LS S I++DE HER+M +D L+ +L
Sbjct: 179 GYSIRFE-DMTSPKTLLKYMTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLL 237
Query: 198 KDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
K+V +R DLK+I+MSATL+A+KF ++F AP+L +PG T+PV+ +Y
Sbjct: 238 KEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFY 284
Score = 133 (51.9 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 25/49 (51%), Positives = 39/49 (79%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLK+I+MSATL+A+KF ++F AP+L +PG T+PV+ +Y
Sbjct: 237 LKEVVQR-RPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFY 284
Score = 93 (37.8 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQF+L D++ + + I TQPRR++A+++ +
Sbjct: 125 GSGKTTQIPQFVLLDDLPQTQRK--MIACTQPRRVAAMSVAQR 165
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 361 (132.1 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 73/177 (41%), Positives = 111/177 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILD--DEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQC 130
I+ TG GKTTQ+PQF++D D ++ + + TQPRR++A++++ RVA+E D
Sbjct: 81 ILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTI 140
Query: 131 GRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMIS 190
G VGY IR E + R + Y T G+L +DP+L I++DE HER++ +
Sbjct: 141 GE---EVGYSIRFE-DCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLAT 196
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
D L +LK+V R DLKL++MSATL AEKF +F GAP++ +PG +PV+ +Y ++
Sbjct: 197 DVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQE 253
Score = 141 (54.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
L++VL R DLKL++MSATL AEKF +F GAP++ +PG +PV+ +Y ++
Sbjct: 203 LKEVLK-NRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQE 253
Score = 89 (36.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 19 GCGKTTQVPQFILD--DEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIY 75
G GKTTQ+PQF++D D ++ + + TQPRR++A+++ + + + + Y
Sbjct: 87 GSGKTTQIPQFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGY 146
Query: 76 TST--GCGKTTQVPQFILDDEIAR 97
+ C V +++ D + R
Sbjct: 147 SIRFEDCSSPRTVLKYLTDGMLLR 170
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 298 (110.0 bits), Expect = 3.6e-32, Sum P(2) = 3.6e-32
Identities = 79/192 (41%), Positives = 109/192 (56%)
Query: 46 MVTQPRRISAIALINK--CLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSEC 103
+ Q +RIS N+ L L S +I +TGCGK+TQ+PQ++ E + G
Sbjct: 46 LTIQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLF--ESGWSDGFRT 103
Query: 104 CIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILP 163
I+ TQPRR++AI++AERVAQE EQ G +VGY +R ++++ I Y T G+L
Sbjct: 104 -ILCTQPRRVAAISLAERVAQEMGEQ--HVGKTVGYSVRFDEKISDIETRIKYVTDGMLI 160
Query: 164 EVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKD----------LKLILMS 213
M DP+L S I++DE HERS+ +D L+ +LK V KR LKLI+ S
Sbjct: 161 REMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISS 220
Query: 214 ATLNAEKFSQFF 225
ATLNA F FF
Sbjct: 221 ATLNANDFFNFF 232
Score = 89 (36.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+PQ++ E + G I+ TQPRR++AI+L +
Sbjct: 81 GCGKSTQIPQYLF--ESGWSDGFRT-ILCTQPRRVAAISLAER 120
Score = 88 (36.0 bits), Expect = 3.6e-32, Sum P(2) = 3.6e-32
Identities = 30/81 (37%), Positives = 37/81 (45%)
Query: 250 NMTRKDLKLILMSATLNAEKFSQFFG----------GAPILHIPGFTYPVQEYYLED--- 296
N LKLI+ SATLNA F FF + IL I G TYPV +YLE+
Sbjct: 208 NNNDNSLKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTS 267
Query: 297 --VLNMTRTLKRSETQQYPND 315
+ +T+ T Q P D
Sbjct: 268 NYIQTTIQTIIDIHTTQPPGD 288
Score = 84 (34.6 bits), Expect = 9.6e-32, Sum P(2) = 9.6e-32
Identities = 24/51 (47%), Positives = 28/51 (54%)
Query: 207 LKLILMSATLNAEKFSQFFG----------GAPILHIPGFTYPVQEYYLED 247
LKLI+ SATLNA F FF + IL I G TYPV +YLE+
Sbjct: 214 LKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEE 264
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 360 (131.8 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 78/185 (42%), Positives = 115/185 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQER--DEQC 130
II TGCGK+TQ+P F+L++ +N G I VT+PRRISAI++A RV+QE +
Sbjct: 651 IISGDTGCGKSTQIPAFLLENS-TKN-GKAVKIYVTEPRRISAISLANRVSQELGGNPPS 708
Query: 131 GRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMIS 190
R VGY +RL+ + + Y T G +++ + V+H+++DE+HERS+ S
Sbjct: 709 ARSHELVGYSVRLDSKCTPLT-PLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDS 767
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 250
D LL + + + LK+I+MSATLNAEKF +F G+ ++ IPG TYPV +YLED+L+
Sbjct: 768 DLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLEDILS 827
Query: 251 MTRKD 255
D
Sbjct: 828 QFGND 832
Score = 148 (57.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 248 VLNMTRKD--LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 299
VL++ ++ LK+I+MSATLNAEKF +F G+ ++ IPG TYPV +YLED+L+
Sbjct: 774 VLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLEDILS 827
Score = 111 (44.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+P F+L++ +N G I VT+PRRISAI+L N+
Sbjct: 657 GCGKSTQIPAFLLENS-TKN-GKAVKIYVTEPRRISAISLANR 697
Score = 39 (18.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 206 DLKLILMSATLNAEKFS 222
DLK +L +ATL A+ S
Sbjct: 503 DLKTVLPTATLAADYIS 519
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 355 (130.0 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 95/243 (39%), Positives = 135/243 (55%)
Query: 7 QSITYRLKEDLAGCGKTTQVPQF-ILD-DEIARNRGSECC-IMVTQPRRISAIALINKCL 63
Q + Y E+L G G+ + + I D D I N+ E + R + +IN+
Sbjct: 187 QFVNYDDIEELPGNGEEEEEEESGIRDSDSIIGNKYDEVRKSLPVYSYREEFLKIINENQ 246
Query: 64 TLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVA 123
TL I+ TG GKTTQ+PQ++ + +RN C TQPRR++A ++A RVA
Sbjct: 247 TL-------IVVGETGSGKTTQLPQYLHEAGYSRNNQVIAC---TQPRRVAATSVANRVA 296
Query: 124 QERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEI 183
E + G VGY IR + I Y T G+L DP L S I++DE
Sbjct: 297 NEMQVKLGE---QVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLGKYSAIMIDEA 353
Query: 184 HERSMISDFLLAILKDV--TDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQ 241
HER++ ++ LL++LKDV T ++ DLK+I+ SAT+NAEKFSQFF APIL+IPG +PV+
Sbjct: 354 HERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPILNIPGRRFPVK 413
Query: 242 EYY 244
+Y
Sbjct: 414 IHY 416
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 43/101 (42%), Positives = 59/101 (58%)
Query: 194 LAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR 253
+ ++K VTD L+ L TL K+S H + + L+DV+ TR
Sbjct: 321 VTVIKYVTDGML-LREFLQDPTLG--KYSAIM--IDEAHERTLSTEILLSLLKDVMMTTR 375
Query: 254 KD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
KD LK+I+ SAT+NAEKFSQFF APIL+IPG +PV+ +Y
Sbjct: 376 KDDLKIIIASATINAEKFSQFFNNAPILNIPGRRFPVKIHY 416
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 351 (128.6 bits), Expect = 4.3e-31, P = 4.3e-31
Identities = 80/171 (46%), Positives = 117/171 (68%)
Query: 78 TGCGKTTQVPQFILDDEIAR-NRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSS 136
TG GKTTQ+PQ++L DE+ N+ C TQPRR++A+++A+RVA E D + G+
Sbjct: 132 TGSGKTTQIPQYVLYDELPHLNKKMVAC---TQPRRVAAMSVAQRVADELDVELGQ---E 185
Query: 137 VGYQIRLE-KELPRKRGSIL-YCTAG-ILPEVMQSDPILSGVSHIVMDEIHERSMISDFL 193
VGY IR E K P +IL Y T G +L E + DP ++ S I++DE HER++ +D L
Sbjct: 186 VGYSIRFENKTTP---STILKYMTDGQLLRETIH-DPNMTRYSCIIIDEAHERTLATDIL 241
Query: 194 LAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
+A+LK ++ +R DLK+I+MSATL+A KF ++F APIL +PG T+PV+ +Y
Sbjct: 242 MALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEAPILAVPGRTHPVEIFY 292
Score = 133 (51.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 249 LNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++ R DLK+I+MSATL+A KF ++F APIL +PG T+PV+ +Y
Sbjct: 248 LSLRRSDLKIIIMSATLDAAKFQRYFFEAPILAVPGRTHPVEIFY 292
Score = 101 (40.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 19 GCGKTTQVPQFILDDEIAR-NRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYT 76
G GKTTQ+PQ++L DE+ N+ C TQPRR++A+++ + L L + Y+
Sbjct: 133 GSGKTTQIPQYVLYDELPHLNKKMVAC---TQPRRVAAMSVAQRVADELDVELGQEVGYS 189
Query: 77 STGCGKTTQ--VPQFILDDEIAR 97
KTT + +++ D ++ R
Sbjct: 190 IRFENKTTPSTILKYMTDGQLLR 212
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 349 (127.9 bits), Expect = 8.2e-31, P = 8.2e-31
Identities = 80/196 (40%), Positives = 125/196 (63%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
+I+ TG GK+TQ+PQF++ + + I VTQPRR++A ++A RV++E C
Sbjct: 201 TIVIGETGSGKSTQIPQFLMPE-------NPKMIGVTQPRRVAAASLAARVSEEYG--C- 250
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ G VGYQ+R + ++ + Y T G+L + D L+ S I++DE HER++++D
Sbjct: 251 KLGQDVGYQVRFTN-MTNRQTKLKYLTDGMLLREIMLDSNLTKYSTIILDEAHERTILTD 309
Query: 192 FLLAILKDV--TDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYL---- 245
++ LK + + KRKDLK+++MSATLNAE FS FFG APIL+I G YPV ++YL
Sbjct: 310 LIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEGKMYPVSQFYLDAES 369
Query: 246 EDVLN-MTRKDLKLIL 260
ED+++ M R +++ L
Sbjct: 370 EDIVDTMIRSIIQINL 385
Score = 161 (61.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 244 YLEDVLNM-TRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE-DVLNMT 301
+L+ ++ RKDLK+++MSATLNAE FS FFG APIL+I G YPV ++YL+ + ++
Sbjct: 314 FLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEGKMYPVSQFYLDAESEDIV 373
Query: 302 RTLKRSETQQYPNDQQ 317
T+ RS Q N+ +
Sbjct: 374 DTMIRSIIQINLNEPE 389
Score = 72 (30.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GK+TQ+PQF++ + + I VTQPRR++A +L
Sbjct: 208 GSGKSTQIPQFLMPE-------NPKMIGVTQPRRVAAASL 240
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 349 (127.9 bits), Expect = 9.3e-31, P = 9.3e-31
Identities = 74/172 (43%), Positives = 111/172 (64%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++++D ++G + I +TQPRR++A ++A RVA E + G+
Sbjct: 243 IIMGETGSGKTTQLPQYLVEDGFT-DQG-KLQIAITQPRRVAATSVAARVADEMNVVLGK 300
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGYQIR E + + + Y T G+L +D LS S I++DE HER++ +D
Sbjct: 301 ---EVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDI 357
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LKD+ +R LKL++ SAT+NA+KFS+FF PI ++PG YPV +Y
Sbjct: 358 LIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHY 409
Score = 132 (51.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY-LEDVLN---- 299
L+D+L R LKL++ SAT+NA+KFS+FF PI ++PG YPV +Y L+ N
Sbjct: 362 LKDILPQ-RPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHA 420
Query: 300 -MTRTLKRSETQQYPND 315
+T + TQ P D
Sbjct: 421 AITTIFQIHTTQSLPGD 437
Score = 88 (36.0 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+PQ++++D ++G + I +TQPRR++A ++ + ++ +L + Y
Sbjct: 249 GSGKTTQLPQYLVEDGFT-DQG-KLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQI 306
Query: 78 TGCGKTT 84
KTT
Sbjct: 307 RFEDKTT 313
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 322 (118.4 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 71/177 (40%), Positives = 108/177 (61%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
+I+ TGCGKTTQ+PQF+ + A G C TQPRR+ A +++ERV+ E +
Sbjct: 44 TIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGC---TQPRRLVAKSVSERVSLELNSP-- 98
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
PGS GY I+ + + K I Y T GIL + DP+L S +++DE+HER++ +D
Sbjct: 99 -PGSLCGYSIQFDHNVSEKT-KIKYMTDGILLNEIFFDPLLERYSIVILDEVHERTLSTD 156
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPI--LHIPGFTYPVQEYYLE 246
LL +LK + +KR D +L+L SA+++A K SQFFG + + I G +PV+ +L+
Sbjct: 157 LLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQ 213
Score = 86 (35.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISA 55
GCGKTTQ+PQF+ + A G C TQPRR+ A
Sbjct: 51 GCGKTTQIPQFLYEAGWASQNGIIGC---TQPRRLVA 84
Score = 86 (35.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPI--LHIPGFTYPVQEYYLE 295
R D +L+L SA+++A K SQFFG + + I G +PV+ +L+
Sbjct: 169 RNDFRLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQ 213
Score = 47 (21.6 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 240 VQEYYLEDVLNMTRKDLKLILMSATL-NAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 298
++E + D+LN L L L L N +F FF P +H+ +++ YL VL
Sbjct: 374 MKEEFEADILNCDMSPLVLFLKGLGLKNILQFP-FFVRPPTVHLMA---ALEDLYLLGVL 429
Query: 299 NMTRTL 304
+ + L
Sbjct: 430 DESGNL 435
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 350 (128.3 bits), Expect = 1.0e-30, P = 1.0e-30
Identities = 74/172 (43%), Positives = 106/172 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQF+ + + CC TQPRR++A+++A RVA+E D R
Sbjct: 438 LIVAETGSGKTTQLPQFLHEAGYTKGNKKICC---TQPRRVAAMSVAARVAKEMDV---R 491
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E K I Y T G+L ++P L+ S I++DE HER++ +D
Sbjct: 492 LGQEVGYSIRFENATSEKT-VIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDI 550
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KD+ R DLK+++ SAT++AEKFS +F AP+ ++PG YPV YY
Sbjct: 551 LFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYY 602
Score = 126 (49.4 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++D+ R DLK+++ SAT++AEKFS +F AP+ ++PG YPV YY
Sbjct: 555 VKDIARF-RPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYY 602
Score = 86 (35.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQF+ + + CC TQPRR++A+++
Sbjct: 444 GSGKTTQLPQFLHEAGYTKGNKKICC---TQPRRVAAMSV 480
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 349 (127.9 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 78/173 (45%), Positives = 112/173 (64%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQ++ + ++ C TQPRR++A+++A RVA DE +
Sbjct: 393 VIVGETGSGKTTQLPQYLHEAGYTKDGMRVGC---TQPRRVAAMSVAARVA---DEMGVK 446
Query: 133 PGSSVGYQIRLEKELPRKRGSIL-YCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G+ VGY IR E K +IL Y T G+L ++P LS S +++DE HER++ +D
Sbjct: 447 VGNEVGYSIRFEDNTSDK--TILKYMTDGMLLREFMTEPDLSSYSALMIDEAHERTVHTD 504
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LLA++KD+ +RKDLKL++ SAT+NAEKF+ +F API +IPG YPV YY
Sbjct: 505 ILLALVKDLARERKDLKLLISSATMNAEKFASYFDDAPIFNIPGRRYPVDIYY 557
Score = 139 (54.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
RKDLKL++ SAT+NAEKF+ +F API +IPG YPV YY
Sbjct: 517 RKDLKLLISSATMNAEKFASYFDDAPIFNIPGRRYPVDIYY 557
Score = 69 (29.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQ++ + ++ C TQPRR++A+++
Sbjct: 399 GSGKTTQLPQYLHEAGYTKDGMRVGC---TQPRRVAAMSV 435
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 349 (127.9 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 77/172 (44%), Positives = 106/172 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+ Q++ ++ A +RG I+VTQPRR++AI++A+RVA E G+
Sbjct: 370 VIIGETGSGKTTQLAQYLYEEGYANDRGKS--IVVTQPRRVAAISVAKRVAMEMQVPLGK 427
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + + + T GIL D L S +++DE HERS+ +D
Sbjct: 428 ---EVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDI 484
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LL K + +R+DLKLI+ SAT+NA+KFS FFG AP IPG T+PVQ Y
Sbjct: 485 LLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIY 536
Score = 140 (54.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
+L R+DLKLI+ SAT+NA+KFS FFG AP IPG T+PVQ Y
Sbjct: 491 ILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIY 536
Score = 97 (39.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ ++ A +RG I+VTQPRR++AI++ +
Sbjct: 376 GSGKTTQLAQYLYEEGYANDRGKS--IVVTQPRRVAAISVAKR 416
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 341 (125.1 bits), Expect = 5.0e-30, P = 5.0e-30
Identities = 72/173 (41%), Positives = 111/173 (64%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GKTTQ+PQ+ +D + R+ G + + TQPRR++A+++A+RVA E D G
Sbjct: 131 VLVGETGSGKTTQIPQWCVD--MVRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 188
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 189 Q---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 244
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 245 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFY 297
Score = 123 (48.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 250 LKEVVRQ-RSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFY 297
Score = 82 (33.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 21/82 (25%), Positives = 42/82 (51%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+PQ+ +D + G + + TQPRR++A+++ + + +L + Y+
Sbjct: 137 GSGKTTQIPQWCVD-MVRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSI 195
Query: 78 T--GCGKTTQVPQFILDDEIAR 97
C + +++ D + R
Sbjct: 196 RFEDCSSAKTILKYMTDGMLLR 217
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 344 (126.2 bits), Expect = 5.5e-30, P = 5.5e-30
Identities = 80/170 (47%), Positives = 112/170 (65%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ QF+ +D RN G C TQPRR++A+++A+RV++E R
Sbjct: 512 IVVGETGSGKTTQLAQFLYEDGYHRN-GMIGC---TQPRRVAAMSVAKRVSEEMGV---R 564
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGIL--PEVMQSDPILSGVSHIVMDEIHERSMIS 190
GS+VGY IR E ++ I Y T G+L +MQ++ L S I+MDE HERS+ +
Sbjct: 565 LGSTVGYSIRFE-DVTGPDTVIKYMTDGVLLRESLMQNN--LEKYSVIIMDEAHERSLNT 621
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 240
D L+ +LK V +R+D+KL++ SAT+N++KFS FFGGAP IPG TYPV
Sbjct: 622 DILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPV 671
Score = 135 (52.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
L+ VL+ R+D+KL++ SAT+N++KFS FFGGAP IPG TYPV
Sbjct: 628 LKKVLSR-RRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPV 671
Score = 82 (33.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ QF+ +D RN G C TQPRR++A+++ +
Sbjct: 518 GSGKTTQLAQFLYEDGYHRN-GMIGC---TQPRRVAAMSVAKR 556
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 343 (125.8 bits), Expect = 6.8e-30, P = 6.8e-30
Identities = 84/178 (47%), Positives = 108/178 (60%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+ Q++ ++ RN G CC TQPRR++A+++A RV+ E + G
Sbjct: 499 IIVGETGSGKTTQIVQYLYEEGYHRN-GIICC---TQPRRVAAVSVAYRVSYEMNVDIG- 553
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S VGY IR E K I Y T GIL +D L S I+MDE HERS+ +D
Sbjct: 554 --SLVGYTIRFEDNTT-KDTKIRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDV 610
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 250
LL ILK++ KR DLKLI+ SAT++A+KFS FFG API +I G T+ V YL N
Sbjct: 611 LLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCN 668
Score = 122 (48.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 251 MTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 299
+ R DLKLI+ SAT++A+KFS FFG API +I G T+ V YL N
Sbjct: 620 LKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCN 668
Score = 90 (36.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 1 MHAFYAQSITYRLKEDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
+ A Y +I + E G GKTTQ+ Q++ ++ RN G CC TQPRR++A+++
Sbjct: 489 LDAVYNNNIIIIVGE--TGSGKTTQIVQYLYEEGYHRN-GIICC---TQPRRVAAVSV 540
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 343 (125.8 bits), Expect = 6.8e-30, P = 6.8e-30
Identities = 84/178 (47%), Positives = 108/178 (60%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+ Q++ ++ RN G CC TQPRR++A+++A RV+ E + G
Sbjct: 499 IIVGETGSGKTTQIVQYLYEEGYHRN-GIICC---TQPRRVAAVSVAYRVSYEMNVDIG- 553
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S VGY IR E K I Y T GIL +D L S I+MDE HERS+ +D
Sbjct: 554 --SLVGYTIRFEDNTT-KDTKIRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDV 610
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 250
LL ILK++ KR DLKLI+ SAT++A+KFS FFG API +I G T+ V YL N
Sbjct: 611 LLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCN 668
Score = 122 (48.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 251 MTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 299
+ R DLKLI+ SAT++A+KFS FFG API +I G T+ V YL N
Sbjct: 620 LKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCN 668
Score = 90 (36.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 1 MHAFYAQSITYRLKEDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
+ A Y +I + E G GKTTQ+ Q++ ++ RN G CC TQPRR++A+++
Sbjct: 489 LDAVYNNNIIIIVGE--TGSGKTTQIVQYLYEEGYHRN-GIICC---TQPRRVAAVSV 540
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 339 (124.4 bits), Expect = 7.1e-30, P = 7.1e-30
Identities = 76/182 (41%), Positives = 114/182 (62%)
Query: 70 SPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQ 129
S II + TG GKTTQ+PQ++ ++ N G I +TQPRR++A++I++RV+QE +
Sbjct: 90 STVIIISETGTGKTTQIPQYLYENGYKDN-G---IIAITQPRRVAAVSISKRVSQEMGVE 145
Query: 130 CGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G VGY +R + + K + Y T G+L D LS S I++DE HER++
Sbjct: 146 LG---DQVGYCVRFDDKTNEKT-KLKYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLN 201
Query: 190 SDFLLAILKDVT---DKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 246
+D L +LK + +K+ LK+I+MSATL+AE FSQ+F AP+L+I G +PVQ YY E
Sbjct: 202 TDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTE 261
Query: 247 DV 248
++
Sbjct: 262 EI 263
Score = 136 (52.9 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDV 297
+ LK+I+MSATL+AE FSQ+F AP+L+I G +PVQ YY E++
Sbjct: 219 KNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEI 263
Score = 83 (34.3 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQ++ ++ N G I +TQPRR++A+++
Sbjct: 99 GTGKTTQIPQYLYENGYKDN-G---IIAITQPRRVAAVSI 134
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 337 (123.7 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 71/172 (41%), Positives = 109/172 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GKTTQ+PQ+ +D + G + + TQPRR++A+++A+RVA E D G+
Sbjct: 124 VLVGETGSGKTTQIPQWCVD-YMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQ 182
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 183 ---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDI 238
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 239 LMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 290
Score = 121 (47.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 243 LKEVVRQ-RADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 290
Score = 80 (33.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 21/82 (25%), Positives = 42/82 (51%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+PQ+ +D + G + + TQPRR++A+++ + + +L + Y+
Sbjct: 130 GSGKTTQIPQWCVD-YMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSI 188
Query: 78 T--GCGKTTQVPQFILDDEIAR 97
C + +++ D + R
Sbjct: 189 RFEDCSSAKTILKYMTDGMLLR 210
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 336 (123.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GKTTQ+PQ+ + E R+ G + + TQPRR++A+++A+RVA E D G
Sbjct: 157 VLVGETGSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 215 Q---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 122 (48.0 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 276 LKEVVRQ-RSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 78 (32.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 19 GCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYT 76
G GKTTQ+PQ+ + E R+ G + + TQPRR++A+++ + + +L + Y+
Sbjct: 163 GSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220
Query: 77 ST--GCGKTTQVPQFILDDEIAR 97
C + +++ D + R
Sbjct: 221 IRFEDCSSAKTILKYMTDGMLLR 243
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 336 (123.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GKTTQ+PQ+ + E R+ G + + TQPRR++A+++A+RVA E D G
Sbjct: 157 VLVGETGSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 215 Q---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 122 (48.0 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 276 LKEVVRQ-RSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 78 (32.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 19 GCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYT 76
G GKTTQ+PQ+ + E R+ G + + TQPRR++A+++ + + +L + Y+
Sbjct: 163 GSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220
Query: 77 ST--GCGKTTQVPQFILDDEIAR 97
C + +++ D + R
Sbjct: 221 IRFEDCSSAKTILKYMTDGMLLR 243
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 336 (123.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GKTTQ+PQ+ + E R+ G + + TQPRR++A+++A+RVA E D G
Sbjct: 157 VLVGETGSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 215 Q---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 122 (48.0 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 276 LKEVVRQ-RSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 78 (32.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 19 GCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYT 76
G GKTTQ+PQ+ + E R+ G + + TQPRR++A+++ + + +L + Y+
Sbjct: 163 GSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220
Query: 77 ST--GCGKTTQVPQFILDDEIAR 97
C + +++ D + R
Sbjct: 221 IRFEDCSSAKTILKYMTDGMLLR 243
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 336 (123.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GKTTQ+PQ+ + E R+ G + + TQPRR++A+++A+RVA E D G
Sbjct: 157 VLVGETGSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 215 Q---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 122 (48.0 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 276 LKEVVRQ-RSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 78 (32.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 19 GCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYT 76
G GKTTQ+PQ+ + E R+ G + + TQPRR++A+++ + + +L + Y+
Sbjct: 163 GSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220
Query: 77 ST--GCGKTTQVPQFILDDEIAR 97
C + +++ D + R
Sbjct: 221 IRFEDCSSAKTILKYMTDGMLLR 243
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 336 (123.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GKTTQ+PQ+ + E R+ G + + TQPRR++A+++A+RVA E D G
Sbjct: 157 VLVGETGSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 215 Q---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 122 (48.0 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 276 LKEVVRQ-RSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 78 (32.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 19 GCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYT 76
G GKTTQ+PQ+ + E R+ G + + TQPRR++A+++ + + +L + Y+
Sbjct: 163 GSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220
Query: 77 ST--GCGKTTQVPQFILDDEIAR 97
C + +++ D + R
Sbjct: 221 IRFEDCSSAKTILKYMTDGMLLR 243
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 336 (123.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
++ TG GKTTQ+PQ+ + E R+ G + + TQPRR++A+++A+RVA E D G
Sbjct: 157 VLVGETGSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG 214
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E + + + Y T G+L +DP+L I++DE HER++ +D
Sbjct: 215 Q---EVGYSIRFE-DCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD 270
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L+ +LK+V +R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 271 ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 122 (48.0 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L++V+ R DLK+I+MSATL+A KF +F P+L IPG T+PV+ +Y
Sbjct: 276 LKEVVRQ-RSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFY 323
Score = 78 (32.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 19 GCGKTTQVPQFILDDEIARNR-GSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYT 76
G GKTTQ+PQ+ + E R+ G + + TQPRR++A+++ + + +L + Y+
Sbjct: 163 GSGKTTQIPQWCV--EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYS 220
Query: 77 ST--GCGKTTQVPQFILDDEIAR 97
C + +++ D + R
Sbjct: 221 IRFEDCSSAKTILKYMTDGMLLR 243
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 340 (124.7 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 81/218 (37%), Positives = 129/218 (59%)
Query: 37 RNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIA 96
R E M+ Q ++ A A +T ++I TG GK+TQV QFI+DD +
Sbjct: 557 RKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYS 616
Query: 97 RNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILY 156
+ + I+ TQPRR+SA+++A+R+++ER ++ G S GY IR E + I +
Sbjct: 617 KGDFTTK-IICTQPRRLSAVSLADRISKERVDEVG---SETGYIIRGENKTSSNT-RITF 671
Query: 157 CTAGILPEVMQSDP---ILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMS 213
T G+L ++QS +L + +I++DE+HERS+ +DFLL +LK + LK+IL+S
Sbjct: 672 ATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLS 731
Query: 214 ATLNAEKFSQFFGGAPI--LHIPGFTYPVQEYYLEDVL 249
AT++ + F FF P+ LHI G TYP+Q++YL+ +L
Sbjct: 732 ATISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSIL 768
Score = 110 (43.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPI--LHIPGFTYPVQEYYLEDVL 298
LK+IL+SAT++ + F FF P+ LHI G TYP+Q++YL+ +L
Sbjct: 725 LKIILLSATISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSIL 768
Score = 91 (37.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQV QFI+DD ++ + I+ TQPRR+SA++L ++
Sbjct: 599 GSGKSTQVVQFIMDDLYSKGDFTTK-IICTQPRRLSAVSLADR 640
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 340 (124.7 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 81/218 (37%), Positives = 129/218 (59%)
Query: 37 RNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIA 96
R E M+ Q ++ A A +T ++I TG GK+TQV QFI+DD +
Sbjct: 557 RKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYS 616
Query: 97 RNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILY 156
+ + I+ TQPRR+SA+++A+R+++ER ++ G S GY IR E + I +
Sbjct: 617 KGDFTTK-IICTQPRRLSAVSLADRISKERVDEVG---SETGYIIRGENKTSSNT-RITF 671
Query: 157 CTAGILPEVMQSDP---ILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMS 213
T G+L ++QS +L + +I++DE+HERS+ +DFLL +LK + LK+IL+S
Sbjct: 672 ATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLS 731
Query: 214 ATLNAEKFSQFFGGAPI--LHIPGFTYPVQEYYLEDVL 249
AT++ + F FF P+ LHI G TYP+Q++YL+ +L
Sbjct: 732 ATISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSIL 768
Score = 110 (43.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPI--LHIPGFTYPVQEYYLEDVL 298
LK+IL+SAT++ + F FF P+ LHI G TYP+Q++YL+ +L
Sbjct: 725 LKIILLSATISVDTFINFFE-KPLTPLHIEGRTYPIQDFYLDSIL 768
Score = 91 (37.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQV QFI+DD ++ + I+ TQPRR+SA++L ++
Sbjct: 599 GSGKSTQVVQFIMDDLYSKGDFTTK-IICTQPRRLSAVSLADR 640
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 339 (124.4 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 81/195 (41%), Positives = 116/195 (59%)
Query: 47 VTQPRR-ISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCI 105
+++ RR + A + L + S II TG GKTTQ+ Q++ +D ++ RG C
Sbjct: 527 ISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSK-RGMIGC- 584
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEV 165
TQPRR++A+++A+RV+ E D Q G VGY IR E + +R I Y T GIL
Sbjct: 585 --TQPRRVAAMSVAKRVSDEMDTQLGE---DVGYAIRFE-DCTSERTVIKYMTDGILLRE 638
Query: 166 MQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF 225
DP L S I+MDE HERS+ +D L +L+++ +R DLKLI+ SAT+++ KF+ FF
Sbjct: 639 SLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFF 698
Query: 226 GGAPILHIPGFTYPV 240
G P IPG T+PV
Sbjct: 699 GNVPTFTIPGRTFPV 713
Score = 111 (44.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 175 VSHIVMDEIHERSMISDFLLAI-LKDVTDKRKDLKL----ILMSATLNAEKFSQFFGGAP 229
V+ V DE+ + + D AI +D T +R +K IL+ +L + + A
Sbjct: 595 VAKRVSDEM-DTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSY--SAI 651
Query: 230 IL---HIPGFTYPVQEYYLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFT 286
I+ H + V L +++ R DLKLI+ SAT+++ KF+ FFG P IPG T
Sbjct: 652 IMDEAHERSLSTDVLFGLLREIV-ARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRT 710
Query: 287 YPV 289
+PV
Sbjct: 711 FPV 713
Score = 76 (31.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D ++ RG C TQPRR++A+++ +
Sbjct: 560 GSGKTTQLTQYLHEDGYSK-RGMIGC---TQPRRVAAMSVAKR 598
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 335 (123.0 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 74/172 (43%), Positives = 107/172 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQVPQ++++ +++ C TQPRR++A+++A RVA+E + G
Sbjct: 272 IIEGETGSGKTTQVPQYLVEAGFTKDKKMIGC---TQPRRVAAMSVAARVAEEMGVKLG- 327
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + R + Y T G L S+P L+ S +++DE HER++ +D
Sbjct: 328 --NEVGYSIRFE-DCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDI 384
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KD+ R +LKL++ SATL+AEKFS FF API IPG YPV +Y
Sbjct: 385 LFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFY 436
Score = 127 (49.8 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++D+ R +LKL++ SATL+AEKFS FF API IPG YPV +Y
Sbjct: 389 VKDIARF-RPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFY 436
Score = 82 (33.9 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQVPQ++++ +++ C TQPRR++A+++
Sbjct: 274 EGETGSGKTTQVPQYLVEAGFTKDKKMIGC---TQPRRVAAMSV 314
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 336 (123.3 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 72/172 (41%), Positives = 109/172 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQ++L++ + G + I TQPRR++A+++A RVAQE + G
Sbjct: 432 VIEGETGSGKTTQIPQYLLEEGYTKG-GMK--IGCTQPRRVAAMSVAARVAQEMSVKLG- 487
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + +R + Y T G+L ++P L+ S I++DE HER++ +D
Sbjct: 488 --NEVGYSIRFE-DCTSERTILKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDI 544
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KD+ R DLK+++ SATL+ E+FS FF AP+ IPG +PV YY
Sbjct: 545 LFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYY 596
Score = 121 (47.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++D+ R DLK+++ SATL+ E+FS FF AP+ IPG +PV YY
Sbjct: 549 IKDIARF-RPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYY 596
Score = 83 (34.3 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++L++ + G + I TQPRR++A+++
Sbjct: 434 EGETGSGKTTQIPQYLLEEGYTKG-GMK--IGCTQPRRVAAMSV 474
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 333 (122.3 bits), Expect = 3.6e-29, P = 3.6e-29
Identities = 80/195 (41%), Positives = 116/195 (59%)
Query: 46 MVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCI 105
++ Q + + A+ + LT+ S I+ TG GKTTQ+ Q++ +D + G C
Sbjct: 64 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGC- 121
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEV 165
TQPRR++A+++A+RV++E G G VGY IR E + + I Y T GIL
Sbjct: 122 --TQPRRVAAMSVAKRVSEEMG---GNLGEEVGYAIRFE-DCTSESTLIKYMTDGILLRE 175
Query: 166 MQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF 225
+ L S I+MDE HERS+ +D L +L++V +R DLKLI+ SAT++AEKF+ FF
Sbjct: 176 SLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 235
Query: 226 GGAPILHIPGFTYPV 240
G PI HIPG T+PV
Sbjct: 236 GNVPIFHIPGRTFPV 250
Score = 135 (52.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R DLKLI+ SAT++AEKF+ FFG PI HIPG T+PV
Sbjct: 214 RSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPV 250
Score = 67 (28.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D + G C TQPRR++A+++ +
Sbjct: 97 GSGKTTQLTQYLHEDGYT-DYGMIGC---TQPRRVAAMSVAKR 135
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 335 (123.0 bits), Expect = 3.7e-29, P = 3.7e-29
Identities = 78/217 (35%), Positives = 127/217 (58%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TG GK+TQ+PQ+IL E A + I+V+QPRRI+AI+++ER+++ER E
Sbjct: 229 IIKGATGSGKSTQLPQYIL--EWAAEHRAPVRIVVSQPRRIAAISVSERISKERGEA--- 283
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDP--ILSGVSHIVMDEIHERSMIS 190
PG++VGY IR+ ++ ++ T+G L + D +H+++DE HER + +
Sbjct: 284 PGTTVGYNIRMNRQCSSNT-VLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDT 342
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 250
DFLL K K L+L+LMSAT++ E S +FGG ++ + G ++ V Y+LED+L+
Sbjct: 343 DFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILS 402
Query: 251 MT---RKDLKLILMSAT---LNAEKFSQFFGGAPILH 281
T ++ L T +E + ++GG I+H
Sbjct: 403 KTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVH 439
Score = 114 (45.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 301
L+L+LMSAT++ E S +FGG ++ + G ++ V Y+LED+L+ T
Sbjct: 359 LRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDILSKT 404
Score = 86 (35.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GK+TQ+PQ+IL E A + I+V+QPRRI+AI++
Sbjct: 235 GSGKSTQLPQYIL--EWAAEHRAPVRIVVSQPRRIAAISV 272
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 332 (121.9 bits), Expect = 4.1e-29, P = 4.1e-29
Identities = 76/177 (42%), Positives = 110/177 (62%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEI-ARNRGSECCIMVTQPRRISAIAIAERVAQERDEQC 130
+++ TG GK+TQ+PQF+L+ + GS I VTQPRR++AI +A RVAQE C
Sbjct: 100 TVLIGETGSGKSTQIPQFVLEKLYDTKKHGS---IAVTQPRRVAAINLATRVAQEHG--C 154
Query: 131 GRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMIS 190
+ G VGY +R + R + Y T G+L + + L S IV+DE HER++++
Sbjct: 155 -KLGEQVGYSVRFDNTTTT-RTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLT 212
Query: 191 DFLLAILKD-VTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 246
D +L LK + R DL++I+MSATL AEKFS+FF APIL + G + V++YYL+
Sbjct: 213 DLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLK 269
Score = 140 (54.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 244 YLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 295
+L+ ++ R DL++I+MSATL AEKFS+FF APIL + G + V++YYL+
Sbjct: 218 FLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLK 269
Score = 91 (37.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 19 GCGKTTQVPQFILDDEI-ARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ+PQF+L+ + GS I VTQPRR++AI L +
Sbjct: 107 GSGKSTQIPQFVLEKLYDTKKHGS---IAVTQPRRVAAINLATR 147
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 334 (122.6 bits), Expect = 4.9e-29, P = 4.9e-29
Identities = 74/168 (44%), Positives = 108/168 (64%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ QF+ +D + G C TQPRR++A+++A+RV++E + + G
Sbjct: 323 IVVGETGSGKTTQLTQFLYEDGYGQ-LGMIGC---TQPRRVAAMSVAKRVSEEMEVKLG- 377
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+VGY IR E + K I Y T G+L ++P L S I+MDE HER++ +D
Sbjct: 378 --GTVGYAIRFE-DCTSKDTVIKYMTDGVLLRESLNEPDLDRYSCIIMDEAHERALNTDV 434
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 240
L+ + K + +R+DLKLI+ SAT+NA++FS FFGGAP IPG T+PV
Sbjct: 435 LMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPV 482
Score = 131 (51.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R+DLKLI+ SAT+NA++FS FFGGAP IPG T+PV
Sbjct: 446 RRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPV 482
Score = 72 (30.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ QF+ +D + G C TQPRR++A+++ +
Sbjct: 329 GSGKTTQLTQFLYEDGYGQ-LGMIGC---TQPRRVAAMSVAKR 367
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 333 (122.3 bits), Expect = 5.4e-29, P = 5.4e-29
Identities = 81/196 (41%), Positives = 122/196 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GKTTQ+ QF+ +D A+ G C TQPRR++A+++A+RV++E + G
Sbjct: 208 VVVGETGSGKTTQLTQFLYEDGYAKF-GMIGC---TQPRRVAAMSVAKRVSEEMEVDLG- 262
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGIL--PEVMQSDPILSGVSHIVMDEIHERSMIS 190
VGY IR E + +I Y T G+L ++Q+D L S I+MDE HER++ +
Sbjct: 263 --DLVGYAIRFE-DCTGPNTAIKYMTDGVLLRESLVQTD--LDKYSCIIMDEAHERALNT 317
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY----LE 246
D L+ +LK + +R+DLKLI+ SAT+NAE+FS+FFGGAP IPG T+PV ++ E
Sbjct: 318 DVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCE 377
Query: 247 DVLNMTRKDLKLILMS 262
D ++ K + I +S
Sbjct: 378 DYVDSAVKQVLAIHVS 393
Score = 138 (53.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R+DLKLI+ SAT+NAE+FS+FFGGAP IPG T+PV ++
Sbjct: 331 RRDLKLIVTSATMNAERFSRFFGGAPEFIIPGRTFPVDVHF 371
Score = 76 (31.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ QF+ +D A+ G C TQPRR++A+++ +
Sbjct: 214 GSGKTTQLTQFLYEDGYAKF-GMIGC---TQPRRVAAMSVAKR 252
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 335 (123.0 bits), Expect = 6.2e-29, P = 6.2e-29
Identities = 80/188 (42%), Positives = 117/188 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II +TG GKTTQ+PQFILD RN C ++VTQPR+I A +IA VA+ER +C
Sbjct: 109 IIRGATGSGKTTQLPQFILDHYAERN--IPCNLVVTQPRKIGATSIARWVARER--KCTL 164
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
GS VGYQ+ LEK + + ++Y T G+L + + S L+ SHI +DE+HERS DF
Sbjct: 165 -GSLVGYQVGLEK-MATEHTKLIYVTTGVLLQKLVSSKTLTEYSHIFIDEVHERSEELDF 222
Query: 193 LLAILKDVT-DKRKDLKLILMSATLNAEKFSQFFGG--------APILHIPGFTYPVQEY 243
LL +++ + + +K+ILMSAT+N +F+++FG A + + G Y V+EY
Sbjct: 223 LLLVVRKLLRSNSRYVKVILMSATINCIEFAEYFGSPIRNQMNPAYVFEVEGAPYAVEEY 282
Query: 244 YLEDVLNM 251
YL+++ M
Sbjct: 283 YLDELKTM 290
Score = 103 (41.3 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQFILD RN C ++VTQPR+I A ++
Sbjct: 115 GSGKTTQLPQFILDHYAERN--IPCNLVVTQPRKIGATSI 152
Score = 94 (38.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFGG--------APILHIPGFTYPVQEYYLEDVLN 299
+L + +K+ILMSAT+N +F+++FG A + + G Y V+EYYL+++
Sbjct: 230 LLRSNSRYVKVILMSATINCIEFAEYFGSPIRNQMNPAYVFEVEGAPYAVEEYYLDELKT 289
Query: 300 M 300
M
Sbjct: 290 M 290
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 334 (122.6 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 74/181 (40%), Positives = 117/181 (64%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGS--ECCIMVTQPRRISAIAIAERVAQERDEQC 130
+I TG GK+TQV QFILD + + +G + I+ TQPRRISAI +AERV+ DE+C
Sbjct: 624 LITGETGSGKSTQVVQFILDF-LQKEKGDFGKTKIVCTQPRRISAIGLAERVS---DERC 679
Query: 131 GRPGSSVGYQIR-LEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
G VGY IR + K R I + T G+L ++Q+ + + +V+DE+HERS+
Sbjct: 680 VTCGEEVGYVIRGVNKTKASTR--IKFMTTGVLVRLLQNARTMLENTIVVIDEVHERSID 737
Query: 190 SDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVL 249
+D ++ ++K++ + + +K++LMSAT+N + F +FF G HI G T+P+ +Y+LED+L
Sbjct: 738 TDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFPITDYFLEDIL 797
Query: 250 N 250
+
Sbjct: 798 S 798
Score = 142 (55.0 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN-MTRT 303
++++L+ R +K++LMSAT+N + F +FF G HI G T+P+ +Y+LED+L+ +
Sbjct: 745 MKNLLHRVR-GMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFK 803
Query: 304 LKRSETQQYPND 315
+KR + Y +D
Sbjct: 804 IKREKALSYDDD 815
Score = 91 (37.1 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 19 GCGKTTQVPQFILDDEIARNRGS--ECCIMVTQPRRISAIALINK 61
G GK+TQV QFILD + + +G + I+ TQPRRISAI L +
Sbjct: 630 GSGKSTQVVQFILDF-LQKEKGDFGKTKIVCTQPRRISAIGLAER 673
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 333 (122.3 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 80/195 (41%), Positives = 116/195 (59%)
Query: 46 MVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCI 105
++ Q + + A+ + LT+ S I+ TG GKTTQ+ Q++ +D + G C
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGC- 582
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEV 165
TQPRR++A+++A+RV++E G G VGY IR E + + I Y T GIL
Sbjct: 583 --TQPRRVAAMSVAKRVSEEMG---GNLGEEVGYAIRFE-DCTSESTLIKYMTDGILLRE 636
Query: 166 MQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF 225
+ L S I+MDE HERS+ +D L +L++V +R DLKLI+ SAT++AEKF+ FF
Sbjct: 637 SLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 696
Query: 226 GGAPILHIPGFTYPV 240
G PI HIPG T+PV
Sbjct: 697 GNVPIFHIPGRTFPV 711
Score = 135 (52.6 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R DLKLI+ SAT++AEKF+ FFG PI HIPG T+PV
Sbjct: 675 RSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPV 711
Score = 67 (28.6 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D + G C TQPRR++A+++ +
Sbjct: 558 GSGKTTQLTQYLHEDGYT-DYGMIGC---TQPRRVAAMSVAKR 596
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 333 (122.3 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 80/195 (41%), Positives = 116/195 (59%)
Query: 46 MVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCI 105
++ Q + + A+ + LT+ S I+ TG GKTTQ+ Q++ +D + G C
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGC- 582
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEV 165
TQPRR++A+++A+RV++E G G VGY IR E + + I Y T GIL
Sbjct: 583 --TQPRRVAAMSVAKRVSEEMG---GNLGEEVGYAIRFE-DCTSESTLIKYMTDGILLRE 636
Query: 166 MQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF 225
+ L S I+MDE HERS+ +D L +L++V +R DLKLI+ SAT++AEKF+ FF
Sbjct: 637 SLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFF 696
Query: 226 GGAPILHIPGFTYPV 240
G PI HIPG T+PV
Sbjct: 697 GNVPIFHIPGRTFPV 711
Score = 135 (52.6 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R DLKLI+ SAT++AEKF+ FFG PI HIPG T+PV
Sbjct: 675 RSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPV 711
Score = 67 (28.6 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D + G C TQPRR++A+++ +
Sbjct: 558 GSGKTTQLTQYLHEDGYT-DYGMIGC---TQPRRVAAMSVAKR 596
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 333 (122.3 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 80/195 (41%), Positives = 116/195 (59%)
Query: 46 MVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCI 105
++ Q + + A+ + LT+ S I+ TG GKTTQ+ Q++ +D + G C
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGC- 582
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEV 165
TQPRR++A+++A+RV++E G G VGY IR E + + I Y T GIL
Sbjct: 583 --TQPRRVAAMSVAKRVSEEMG---GNLGEEVGYAIRFE-DCTSENTLIKYMTDGILLRE 636
Query: 166 MQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF 225
+ L S I+MDE HERS+ +D L +L++V +R DLKLI+ SAT++AEKF+ FF
Sbjct: 637 SLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFF 696
Query: 226 GGAPILHIPGFTYPV 240
G PI HIPG T+PV
Sbjct: 697 GNVPIFHIPGRTFPV 711
Score = 134 (52.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R DLKLI+ SAT++AEKF+ FFG PI HIPG T+PV
Sbjct: 675 RSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPV 711
Score = 67 (28.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D + G C TQPRR++A+++ +
Sbjct: 558 GSGKTTQLTQYLHEDGYT-DYGMIGC---TQPRRVAAMSVAKR 596
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 332 (121.9 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 76/187 (40%), Positives = 110/187 (58%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGK+TQVPQ++L A C TQPRRI+ I++A+RV E Q G
Sbjct: 182 VVAGDTGCGKSTQVPQYLL----AAGCSHVAC---TQPRRIACISLAKRVGFESLSQYG- 233
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S VGYQIR E I++ T G+L MQ +P L +++DE+HER + +DF
Sbjct: 234 --SQVGYQIRFESTRSAAT-KIVFLTVGLLLRQMQREPSLPQYQVLIVDEVHERHLHNDF 290
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYL-EDVLNM 251
LL +L+ + +R DLK++LMSAT+N FS +FG AP++ +PG +P+ Y ++
Sbjct: 291 LLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPT 350
Query: 252 TRKDLKL 258
T K KL
Sbjct: 351 TSKSEKL 357
Score = 118 (46.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R DLK++LMSAT+N FS +FG AP++ +PG +P+ Y
Sbjct: 302 RPDLKVVLMSATINISLFSSYFGNAPVVQVPGRLFPITVVY 342
Score = 82 (33.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++L A C TQPRRI+ I+L +
Sbjct: 188 GCGKSTQVPQYLL----AAGCSHVAC---TQPRRIACISLAKR 223
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 332 (121.9 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 79/195 (40%), Positives = 116/195 (59%)
Query: 46 MVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCI 105
++ Q + + A+ + LT+ S I+ TG GKTTQ+ Q++ +D + G C
Sbjct: 524 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGC- 581
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEV 165
TQPRR++A+++A+RV++E G G VGY IR E + + I Y T GIL
Sbjct: 582 --TQPRRVAAMSVAKRVSEEMG---GNLGEEVGYAIRFE-DCTSENTLIKYMTDGILLRE 635
Query: 166 MQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF 225
+ L S ++MDE HERS+ +D L +L++V +R DLKLI+ SAT++AEKF+ FF
Sbjct: 636 SLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFF 695
Query: 226 GGAPILHIPGFTYPV 240
G PI HIPG T+PV
Sbjct: 696 GNVPIFHIPGRTFPV 710
Score = 134 (52.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R DLKLI+ SAT++AEKF+ FFG PI HIPG T+PV
Sbjct: 674 RSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPV 710
Score = 67 (28.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D + G C TQPRR++A+++ +
Sbjct: 557 GSGKTTQLTQYLHEDGYT-DYGMIGC---TQPRRVAAMSVAKR 595
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 331 (121.6 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 73/172 (42%), Positives = 105/172 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGK+TQVPQ++L A C TQPRRI+ I++A+RV+ E Q G
Sbjct: 181 VVAGDTGCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKRVSFESLSQYG- 232
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S VGYQIR E I++ T G+L +Q +P L +++DE+HER + +DF
Sbjct: 233 --SQVGYQIRFESTRTAAT-KIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDF 289
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LL +L+ + KR DLK+ILMSAT+N FS +FG AP++ +PG +P+ Y
Sbjct: 290 LLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVY 341
Score = 117 (46.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R DLK+ILMSAT+N FS +FG AP++ +PG +P+ Y
Sbjct: 301 RPDLKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVY 341
Score = 82 (33.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++L A C TQPRRI+ I+L +
Sbjct: 187 GCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKR 222
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 330 (121.2 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 75/174 (43%), Positives = 108/174 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ + G I TQPRR++A+++A RVA E C +
Sbjct: 384 IIEGETGSGKTTQLPQYLYEAGFCEG-GKR--IGCTQPRRVAAMSVAARVADEVG--C-K 437
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G+ VGY IR E + ++ + Y T G+L ++P L+ S +++DE HER++ +D
Sbjct: 438 LGTQVGYSIRFE-DCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDI 496
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 246
L ++KD+ RKDLKL++ SATL+AEKFS FF API IPG +PV YY +
Sbjct: 497 LFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQ 550
Score = 139 (54.0 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 295
++D+ RKDLKL++ SATL+AEKFS FF API IPG +PV YY +
Sbjct: 501 VKDIARF-RKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQ 550
Score = 71 (30.1 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++ + G I TQPRR++A+++
Sbjct: 386 EGETGSGKTTQLPQYLYEAGFCEG-GKR--IGCTQPRRVAAMSV 426
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 330 (121.2 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 75/174 (43%), Positives = 108/174 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ + G I TQPRR++A+++A RVA E C +
Sbjct: 384 IIEGETGSGKTTQLPQYLYEAGFCEG-GKR--IGCTQPRRVAAMSVAARVADEVG--C-K 437
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G+ VGY IR E + ++ + Y T G+L ++P L+ S +++DE HER++ +D
Sbjct: 438 LGTQVGYSIRFE-DCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDI 496
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 246
L ++KD+ RKDLKL++ SATL+AEKFS FF API IPG +PV YY +
Sbjct: 497 LFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQ 550
Score = 139 (54.0 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 295
++D+ RKDLKL++ SATL+AEKFS FF API IPG +PV YY +
Sbjct: 501 VKDIARF-RKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQ 550
Score = 71 (30.1 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++ + G I TQPRR++A+++
Sbjct: 386 EGETGSGKTTQLPQYLYEAGFCEG-GKR--IGCTQPRRVAAMSV 426
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 331 (121.6 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 73/172 (42%), Positives = 105/172 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGK+TQVPQ++L A C TQPRRI+ I++A+RV+ E Q G
Sbjct: 186 VVAGDTGCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKRVSFESLSQYG- 237
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S VGYQIR E I++ T G+L +Q +P L +++DE+HER + +DF
Sbjct: 238 --SQVGYQIRFESTRTAAT-KIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDF 294
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LL +L+ + KR DLK+ILMSAT+N FS +FG AP++ +PG +P+ Y
Sbjct: 295 LLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVY 346
Score = 117 (46.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R DLK+ILMSAT+N FS +FG AP++ +PG +P+ Y
Sbjct: 306 RPDLKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVY 346
Score = 82 (33.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++L A C TQPRRI+ I+L +
Sbjct: 192 GCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKR 227
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 327 (120.2 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 77/181 (42%), Positives = 120/181 (66%)
Query: 71 PSIIYTS-TGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQ 129
P +I T TG GK+TQ+P+++ + +A++ G+ I VTQPRR++ I++A+RVA+E
Sbjct: 18 PFLIVTGETGSGKSTQLPKYLYEAGLAQH-GA---IGVTQPRRVATISVAQRVAEEMG-- 71
Query: 130 CGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
C GS VGYQ+R + + + +I Y T G L + +DP+LS S I++DE HERS+
Sbjct: 72 CAL-GSVVGYQVRFD-DCSSEETAIKYMTDGCLLRHILADPLLSKYSIIILDEAHERSLS 129
Query: 190 SDFLLAILKDV--TDK---RK-DLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEY 243
+D L +LK + +K RK ++K+++MSATL +K S+FFG +LHIPG +YPV+E
Sbjct: 130 TDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEI 189
Query: 244 Y 244
+
Sbjct: 190 F 190
Score = 122 (48.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 21/54 (38%), Positives = 39/54 (72%)
Query: 240 VQEYYLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
+++ +L++ + ++K+++MSATL +K S+FFG +LHIPG +YPV+E +
Sbjct: 137 LKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIF 190
Score = 74 (31.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/43 (37%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ+P+++ + +A++ G+ I VTQPRR++ I++ +
Sbjct: 27 GSGKSTQLPKYLYEAGLAQH-GA---IGVTQPRRVATISVAQR 65
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 330 (121.2 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 79/173 (45%), Positives = 109/173 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+ Q+ LD+E N G C TQPRR++A+++A+RVA+E C +
Sbjct: 503 VIVGETGSGKTTQITQY-LDEEGFSNYGMIGC---TQPRRVAAVSVAKRVAEEVG--C-K 555
Query: 133 PGSSVGYQIRLEKEL-PRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G VGY IR E P R I Y T G+L DP +S S I++DE HER++ +D
Sbjct: 556 VGHDVGYTIRFEDVTGPDTR--IKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATD 613
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L A+LK KR +LK+I+ SATLN+ KFS++F PI++IPG T+PV+ Y
Sbjct: 614 VLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLY 666
Score = 118 (46.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R +LK+I+ SATLN+ KFS++F PI++IPG T+PV+ Y
Sbjct: 626 RPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLY 666
Score = 82 (33.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q+ LD+E N G C TQPRR++A+++ +
Sbjct: 509 GSGKTTQITQY-LDEEGFSNYGMIGC---TQPRRVAAVSVAKR 547
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 326 (119.8 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 65/171 (38%), Positives = 107/171 (62%)
Query: 78 TGCGKTTQVPQ----FILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRP 133
TG GKTTQ+PQ F+ + + G + TQPRR++A+++A RVA+E D G+
Sbjct: 101 TGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQ- 159
Query: 134 GSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFL 193
VGY IR E + +R + YCT G+L + P+L +++DE HER++ +D L
Sbjct: 160 --EVGYSIRFE-DCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDIL 216
Query: 194 LAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
+ ++K++ R D+K+++MSATL+A KF ++F P+L +PG T+PV+ ++
Sbjct: 217 MGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFF 267
Score = 115 (45.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 19/41 (46%), Positives = 32/41 (78%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R D+K+++MSATL+A KF ++F P+L +PG T+PV+ ++
Sbjct: 227 RADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFF 267
Score = 74 (31.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 19 GCGKTTQVPQ----FILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSI 73
G GKTTQ+PQ F+ + + G + TQPRR++A+++ + + +L +
Sbjct: 102 GSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEV 161
Query: 74 IYT 76
Y+
Sbjct: 162 GYS 164
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 326 (119.8 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 65/171 (38%), Positives = 107/171 (62%)
Query: 78 TGCGKTTQVPQ----FILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRP 133
TG GKTTQ+PQ F+ + + G + TQPRR++A+++A RVA+E D G+
Sbjct: 101 TGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQ- 159
Query: 134 GSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFL 193
VGY IR E + +R + YCT G+L + P+L +++DE HER++ +D L
Sbjct: 160 --EVGYSIRFE-DCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDIL 216
Query: 194 LAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
+ ++K++ R D+K+++MSATL+A KF ++F P+L +PG T+PV+ ++
Sbjct: 217 MGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFF 267
Score = 115 (45.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 19/41 (46%), Positives = 32/41 (78%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R D+K+++MSATL+A KF ++F P+L +PG T+PV+ ++
Sbjct: 227 RADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFF 267
Score = 74 (31.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 19 GCGKTTQVPQ----FILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSI 73
G GKTTQ+PQ F+ + + G + TQPRR++A+++ + + +L +
Sbjct: 102 GSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEV 161
Query: 74 IYT 76
Y+
Sbjct: 162 GYS 164
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 329 (120.9 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 75/174 (43%), Positives = 107/174 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGK+TQVPQ++L I N I TQPRRI+ I++A+RV+ E Q G
Sbjct: 182 VVAGDTGCGKSTQVPQYLLASGI--NN-----IACTQPRRIACISLAKRVSFESLNQYG- 233
Query: 133 PGSSVGYQIRLE--KELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMIS 190
S VGYQIR E + L K +L+ T G+L +Q D L +++DE+HER +
Sbjct: 234 --SKVGYQIRFETSRTLATK---LLFLTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHC 288
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
DFLL +L+ + R DL+L+LMSAT+N + FS +F AP+L +PG +P+Q Y
Sbjct: 289 DFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIY 342
Score = 124 (48.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
L +L++ R DL+L+LMSAT+N + FS +F AP+L +PG +P+Q Y
Sbjct: 295 LRSLLSL-RPDLRLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIY 342
Score = 84 (34.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++L I N I TQPRRI+ I+L +
Sbjct: 188 GCGKSTQVPQYLLASGI-NN------IACTQPRRIACISLAKR 223
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 328 (120.5 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 75/172 (43%), Positives = 105/172 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GKTTQ+ Q++ ++ + C TQPRR++A+++A+RVA+E C R
Sbjct: 530 VLLGETGSGKTTQITQYLAEEGYTSDSKMIGC---TQPRRVAAMSVAKRVAEEVG--C-R 583
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + R I Y T G+L DP+LS S I++DE HER++ +D
Sbjct: 584 VGEEVGYTIRFEDKTSRMT-QIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDV 642
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK KR DLKLI+ SATL+AE+FS +F PI IPG +YPV+ Y
Sbjct: 643 LFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMY 694
Score = 118 (46.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 251 MTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
+ R DLKLI+ SATL+AE+FS +F PI IPG +YPV+ Y
Sbjct: 652 LKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMY 694
Score = 70 (29.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ ++ + C TQPRR++A+++ + + + + YT
Sbjct: 536 GSGKTTQITQYLAEEGYTSDSKMIGC---TQPRRVAAMSVAKRVAEEVGCRVGEEVGYTI 592
Query: 78 TGCGKTTQVPQ--FILDDEIARNRGSECCI 105
KT+++ Q ++ D + R EC +
Sbjct: 593 RFEDKTSRMTQIKYMTDGMLQR----ECLV 618
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 329 (120.9 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 75/168 (44%), Positives = 105/168 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+ Q++ +D ++ G C TQPRR++A+++A+RV++E G
Sbjct: 679 IIVGETGSGKTTQLVQYLYEDGYSKF-GKIGC---TQPRRVAAVSVAKRVSEEMSVTLG- 733
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + +I Y T GIL +DP L S I+MDE HERS+ +D
Sbjct: 734 --NEVGYSIRFE-DCTSNETAIKYMTDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDV 790
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 240
L ILK V +R D+KLI+ SAT++++KFS FFG P+ IPG T+PV
Sbjct: 791 LFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDVPVFTIPGRTFPV 838
Score = 116 (45.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 251 MTRK-DLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
M+R+ D+KLI+ SAT++++KFS FFG P+ IPG T+PV
Sbjct: 799 MSRRYDMKLIVTSATMDSKKFSMFFGDVPVFTIPGRTFPV 838
Score = 72 (30.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D ++ G C TQPRR++A+++ +
Sbjct: 685 GSGKTTQLVQYLYEDGYSKF-GKIGC---TQPRRVAAVSVAKR 723
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 327 (120.2 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 73/168 (43%), Positives = 103/168 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ + + G C TQPRR++A+++A RVAQE G+
Sbjct: 424 IIVGETGSGKTTQIPQYLHEAGYTK-LGKVGC---TQPRRVAAMSVAARVAQEMG---GK 476
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + ++ + Y T G+L + +P L S I++DE HER++ +D
Sbjct: 477 LGHEVGYSIRFE-DCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDI 535
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 240
L ++KD+ R DLKL++ SAT++AEKFS FF API PG YPV
Sbjct: 536 LFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPV 583
Score = 118 (46.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
++D+ R DLKL++ SAT++AEKFS FF API PG YPV
Sbjct: 540 VKDIAR-ARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPV 583
Score = 71 (30.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQ++ + + G C TQPRR++A+++
Sbjct: 430 GSGKTTQIPQYLHEAGYTK-LGKVGC---TQPRRVAAMSV 465
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 328 (120.5 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 79/195 (40%), Positives = 115/195 (58%)
Query: 46 MVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCI 105
++ Q + + A+ + LT+ S I+ TG GKTTQ+ Q++ D + G C
Sbjct: 526 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYT-DYGMIGC- 583
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEV 165
TQPRR++A+++A+RV++E G G VGY IR E + + I Y T GIL
Sbjct: 584 --TQPRRVAAMSVAKRVSEEMG---GNLGEEVGYAIRFE-DCTSENTLIKYMTDGILLRE 637
Query: 166 MQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF 225
+ L S I+MDE HERS+ +D L +L++V +R DLKLI+ SAT++A+KF+ FF
Sbjct: 638 SLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFF 697
Query: 226 GGAPILHIPGFTYPV 240
G PI HIPG T+PV
Sbjct: 698 GNVPIFHIPGRTFPV 712
Score = 131 (51.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 24/37 (64%), Positives = 30/37 (81%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R DLKLI+ SAT++A+KF+ FFG PI HIPG T+PV
Sbjct: 676 RSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPV 712
Score = 65 (27.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ D + G C TQPRR++A+++ +
Sbjct: 559 GSGKTTQLTQYLHQDGYT-DYGMIGC---TQPRRVAAMSVAKR 597
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 327 (120.2 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 76/175 (43%), Positives = 110/175 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQV Q++ + A N+G C TQPRR++A+++A+RVA+E C +
Sbjct: 597 IVVGDTGSGKTTQVTQYLAEAGWA-NKGIIGC---TQPRRVAAMSVAKRVAEEVG--C-K 649
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G+ VGY IR E + I Y T G+L + DP L S I++DE HER++ +D
Sbjct: 650 LGAEVGYTIRFE-DCTSPETKIKYMTDGMLQREVLLDPDLKKYSVIMLDEAHERTIATDV 708
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK +R DL+LI+ SATL+A+KFS++F G PI IPG T+PV+ Y ++
Sbjct: 709 LFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSIPGRTFPVEIMYSKE 763
Score = 126 (49.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R DL+LI+ SATL+A+KFS++F G PI IPG T+PV+ Y ++
Sbjct: 720 RPDLRLIVTSATLDADKFSEYFYGCPIFSIPGRTFPVEIMYSKE 763
Score = 74 (31.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQV Q++ + A N+G C TQPRR++A+++ +
Sbjct: 603 GSGKTTQVTQYLAEAGWA-NKGIIGC---TQPRRVAAMSVAKR 641
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 326 (119.8 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 72/174 (41%), Positives = 110/174 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ + ++ G C TQPRR++A+++A RVA+E C +
Sbjct: 487 IIVGETGSGKTTQIPQYLHEAGFSKT-GKIGC---TQPRRVAAMSVAARVAEEVG--C-K 539
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G+ VGY IR E + ++ + Y T G+L + P L+ S +++DE HER++ +D
Sbjct: 540 LGNEVGYSIRFE-DCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDI 598
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 246
L +LKD+T R DLKL++ SAT++AE+FS +F GAP +IPG Y V +Y +
Sbjct: 599 LFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQ 652
Score = 123 (48.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 295
L+D+ R DLKL++ SAT++AE+FS +F GAP +IPG Y V +Y +
Sbjct: 603 LKDITRF-RPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQ 652
Score = 74 (31.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQ++ + ++ G C TQPRR++A+++
Sbjct: 493 GSGKTTQIPQYLHEAGFSKT-GKIGC---TQPRRVAAMSV 528
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 326 (119.8 bits), Expect = 4.3e-28, P = 4.3e-28
Identities = 77/173 (44%), Positives = 105/173 (60%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+ Q++L+D G I TQPRR++A+++A RVA E G+
Sbjct: 461 IIVGETGSGKTTQLAQYLLEDGF----GDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQ 516
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + ++ I Y T GIL D L S I+MDE HERS+ +D
Sbjct: 517 ---DVGYAIRFE-DCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDV 572
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGG-APILHIPGFTYPVQEYY 244
L +L++V KR DLKLI+ SAT++A+KF+ FFGG P IPG T+PV+ ++
Sbjct: 573 LFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFH 625
Score = 118 (46.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGG-APILHIPGFTYPVQEYY 293
L +V+ R DLKLI+ SAT++A+KF+ FFGG P IPG T+PV+ ++
Sbjct: 577 LREVI-AKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFH 625
Score = 77 (32.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++L+D G I TQPRR++A+++ +
Sbjct: 467 GSGKTTQLAQYLLEDGF----GDSGLIGCTQPRRVAAMSVARR 505
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 326 (119.8 bits), Expect = 4.3e-28, P = 4.3e-28
Identities = 77/173 (44%), Positives = 105/173 (60%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+ Q++L+D G I TQPRR++A+++A RVA E G+
Sbjct: 461 IIVGETGSGKTTQLAQYLLEDGF----GDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQ 516
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + ++ I Y T GIL D L S I+MDE HERS+ +D
Sbjct: 517 ---DVGYAIRFE-DCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDV 572
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGG-APILHIPGFTYPVQEYY 244
L +L++V KR DLKLI+ SAT++A+KF+ FFGG P IPG T+PV+ ++
Sbjct: 573 LFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFH 625
Score = 118 (46.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGG-APILHIPGFTYPVQEYY 293
L +V+ R DLKLI+ SAT++A+KF+ FFGG P IPG T+PV+ ++
Sbjct: 577 LREVI-AKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFH 625
Score = 77 (32.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++L+D G I TQPRR++A+++ +
Sbjct: 467 GSGKTTQLAQYLLEDGF----GDSGLIGCTQPRRVAAMSVARR 505
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 326 (119.8 bits), Expect = 4.5e-28, P = 4.5e-28
Identities = 79/205 (38%), Positives = 121/205 (59%)
Query: 36 ARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEI 95
AR+ ++ ++ Q + + A+ + L++ S I+ TG GKTTQ+ Q++ +D
Sbjct: 518 ARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGY 577
Query: 96 ARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSIL 155
+ G C TQPRR++A+++A+RV++E R G VGY IR E + + I
Sbjct: 578 T-DYGMIGC---TQPRRVAAMSVAKRVSEEMGV---RLGEEVGYAIRFE-DCTSENTIIK 629
Query: 156 YCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSAT 215
Y T GIL + L S I+MDE HERS+ +D L +L++V +R DLKL++ SAT
Sbjct: 630 YMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSAT 689
Query: 216 LNAEKFSQFFGGAPILHIPGFTYPV 240
++A+KF+ FFG PI HIPG T+PV
Sbjct: 690 MDADKFASFFGNVPIFHIPGRTFPV 714
Score = 131 (51.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R DLKL++ SAT++A+KF+ FFG PI HIPG T+PV
Sbjct: 678 RSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPV 714
Score = 67 (28.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D + G C TQPRR++A+++ +
Sbjct: 561 GSGKTTQLTQYLHEDGYT-DYGMIGC---TQPRRVAAMSVAKR 599
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 326 (119.8 bits), Expect = 4.6e-28, P = 4.6e-28
Identities = 79/205 (38%), Positives = 121/205 (59%)
Query: 36 ARNRGSECCIMVTQPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEI 95
AR+ ++ ++ Q + + A+ + L++ S I+ TG GKTTQ+ Q++ +D
Sbjct: 521 ARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGY 580
Query: 96 ARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSIL 155
+ G C TQPRR++A+++A+RV++E R G VGY IR E + + I
Sbjct: 581 T-DYGMIGC---TQPRRVAAMSVAKRVSEEMGV---RLGEEVGYAIRFE-DCTSENTIIK 632
Query: 156 YCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSAT 215
Y T GIL + L S I+MDE HERS+ +D L +L++V +R DLKL++ SAT
Sbjct: 633 YMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSAT 692
Query: 216 LNAEKFSQFFGGAPILHIPGFTYPV 240
++A+KF+ FFG PI HIPG T+PV
Sbjct: 693 MDADKFASFFGNVPIFHIPGRTFPV 717
Score = 131 (51.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R DLKL++ SAT++A+KF+ FFG PI HIPG T+PV
Sbjct: 681 RSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPV 717
Score = 67 (28.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D + G C TQPRR++A+++ +
Sbjct: 564 GSGKTTQLTQYLHEDGYT-DYGMIGC---TQPRRVAAMSVAKR 602
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 321 (118.1 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 71/181 (39%), Positives = 114/181 (62%)
Query: 69 LSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDE 128
L +++ TG GKTTQ+PQ++ + I R +G I VTQPRR++AI++A RV+ E+
Sbjct: 40 LECAVLIGETGSGKTTQIPQYLYEAGIGR-QG---IIAVTQPRRVAAISLATRVSDEKRT 95
Query: 129 QCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSM 188
+ G+ VGY +R + +L I + T G+L DPIL S +++DE HER++
Sbjct: 96 ELGK---LVGYTVRFD-DLTSDETRIKFLTDGMLLREAIGDPILRKYSVVILDEAHERTI 151
Query: 189 ISDFLLAILKDVTDKRKDL-----KLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEY 243
+D L ++K KRK+L K+I+MSAT++ ++FSQ+F GAP+L++ G +P+Q +
Sbjct: 152 HTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAPVLYLEGRQHPIQVF 211
Query: 244 Y 244
Y
Sbjct: 212 Y 212
Score = 117 (46.2 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 19/38 (50%), Positives = 32/38 (84%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
LK+I+MSAT++ ++FSQ+F GAP+L++ G +P+Q +Y
Sbjct: 175 LKVIVMSATMDVDQFSQYFNGAPVLYLEGRQHPIQVFY 212
Score = 93 (37.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQ++ + I R +G I VTQPRR++AI+L +
Sbjct: 50 GSGKTTQIPQYLYEAGIGR-QG---IIAVTQPRRVAAISLATR 88
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 289 (106.8 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 78/217 (35%), Positives = 120/217 (55%)
Query: 73 IIYTSTGCGKTTQVPQFILD----------DEIA------RNRGSECCIMVTQPRRISAI 116
II TGCGKTTQVPQ I + D I + R + ++++ PRR++ I
Sbjct: 24 IIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKNDEKKKRKEKKKMLISLPRRVATI 83
Query: 117 AIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVS 176
+AERV++E G G+ VGY IR K + + I + T GIL + +DP+L
Sbjct: 84 TVAERVSKEMKR--GDIGNYVGYTIRF-KNVCSDKTRIKFVTDGILIREIMNDPLLKKYK 140
Query: 177 HIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGF 236
+++DEIHERS+ +D LL K + KRK +K+ILMSAT + F+QFF PI+ IP
Sbjct: 141 FLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHK 200
Query: 237 TYPVQEYY----LED-VLNMTRKDLKLILMSATLNAE 268
+ + YY +ED +L++ L++ + + ++E
Sbjct: 201 LHKITIYYPRRNIEDYILSVVSTILQIHFGNTSYSSE 237
Score = 108 (43.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY----LED-VLNMTR 302
+L RK +K+ILMSAT + F+QFF PI+ IP + + YY +ED +L++
Sbjct: 163 ILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVS 222
Query: 303 TLKR------SETQQYPNDQQH 318
T+ + S + ++ ND H
Sbjct: 223 TILQIHFGNTSYSSEFENDDDH 244
Score = 61 (26.5 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 11/12 (91%), Positives = 11/12 (91%)
Query: 19 GCGKTTQVPQFI 30
GCGKTTQVPQ I
Sbjct: 30 GCGKTTQVPQII 41
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 289 (106.8 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 78/217 (35%), Positives = 120/217 (55%)
Query: 73 IIYTSTGCGKTTQVPQFILD----------DEIA------RNRGSECCIMVTQPRRISAI 116
II TGCGKTTQVPQ I + D I + R + ++++ PRR++ I
Sbjct: 24 IIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKNDEKKKRKEKKKMLISLPRRVATI 83
Query: 117 AIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVS 176
+AERV++E G G+ VGY IR K + + I + T GIL + +DP+L
Sbjct: 84 TVAERVSKEMKR--GDIGNYVGYTIRF-KNVCSDKTRIKFVTDGILIREIMNDPLLKKYK 140
Query: 177 HIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGF 236
+++DEIHERS+ +D LL K + KRK +K+ILMSAT + F+QFF PI+ IP
Sbjct: 141 FLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHK 200
Query: 237 TYPVQEYY----LED-VLNMTRKDLKLILMSATLNAE 268
+ + YY +ED +L++ L++ + + ++E
Sbjct: 201 LHKITIYYPRRNIEDYILSVVSTILQIHFGNTSYSSE 237
Score = 108 (43.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY----LED-VLNMTR 302
+L RK +K+ILMSAT + F+QFF PI+ IP + + YY +ED +L++
Sbjct: 163 ILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVS 222
Query: 303 TLKR------SETQQYPNDQQH 318
T+ + S + ++ ND H
Sbjct: 223 TILQIHFGNTSYSSEFENDDDH 244
Score = 61 (26.5 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 11/12 (91%), Positives = 11/12 (91%)
Query: 19 GCGKTTQVPQFI 30
GCGKTTQVPQ I
Sbjct: 30 GCGKTTQVPQII 41
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 322 (118.4 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 76/177 (42%), Positives = 107/177 (60%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+PQ++ ++RN G I VTQPRR++AI +A+RV+ E R
Sbjct: 38 IVTGETGSGKTTQLPQYLYKAGLSRN-GR---IGVTQPRRVAAITVAQRVSSEMQV---R 90
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGYQ+R + + K I Y T G L + +DP L+ S +++DE HERS+ +D
Sbjct: 91 LGEEVGYQVRFD-DCSTKDTMIKYMTDGCLLREILADPSLTQYSIVILDEAHERSLNTDV 149
Query: 193 LLAILKDVTDK-----RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LL +LK K + LK+++MSATL EK S F+G P+ IPG TYPV+E +
Sbjct: 150 LLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETF 206
Score = 117 (46.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
LK+++MSATL EK S F+G P+ IPG TYPV+E +
Sbjct: 169 LKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETF 206
Score = 87 (35.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 TYRLKEDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
T+ + G GKTTQ+PQ++ ++RN G I VTQPRR++AI + +
Sbjct: 35 TFLIVTGETGSGKTTQLPQYLYKAGLSRN-GR---IGVTQPRRVAAITVAQR 82
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 326 (119.8 bits), Expect = 5.1e-28, P = 5.1e-28
Identities = 71/168 (42%), Positives = 105/168 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ +D + G C TQPRR++A+++A+RV++E + G
Sbjct: 583 IVVGETGSGKTTQLTQYLHEDGYT-SYGMVGC---TQPRRVAAMSVAKRVSEEMNSNLGE 638
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + ++ I Y T GIL + L S ++MDE HERS+ +D
Sbjct: 639 ---EVGYAIRFE-DCTSEKTMIKYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDV 694
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 240
L +L++V +R DLKLI+ SAT++++KF+ FFG PI HIPG T+PV
Sbjct: 695 LFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPV 742
Score = 131 (51.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
L +V++ R DLKLI+ SAT++++KF+ FFG PI HIPG T+PV
Sbjct: 699 LREVVSR-RSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPV 742
Score = 68 (29.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ +D + G C TQPRR++A+++ +
Sbjct: 589 GSGKTTQLTQYLHEDGYT-SYGMVGC---TQPRRVAAMSVAKR 627
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 325 (119.5 bits), Expect = 5.7e-28, P = 5.7e-28
Identities = 72/172 (41%), Positives = 104/172 (60%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGK+TQVPQ++L A C TQPRRI+ I++A+RV E Q G
Sbjct: 182 VVAGDTGCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKRVGLESLSQYG- 233
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S VGYQIR E I++ T G+L +Q +P L +++DE+HER + +DF
Sbjct: 234 --SQVGYQIRFESTRSAAT-KIVFLTVGLLLRHVQREPTLPQYRVLIVDEVHERHLHNDF 290
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LL +L+ + +R DLK+ILMSAT+N FS +FG AP++ +PG +P+ Y
Sbjct: 291 LLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVY 342
Score = 117 (46.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMTR-TLKRSETQQ 311
R DLK+ILMSAT+N FS +FG AP++ +PG +P+ Y T TL++ + +
Sbjct: 302 RPDLKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRP 361
Query: 312 Y 312
+
Sbjct: 362 F 362
Score = 82 (33.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++L A C TQPRRI+ I+L +
Sbjct: 188 GCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKR 223
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 324 (119.1 bits), Expect = 6.2e-28, P = 6.2e-28
Identities = 71/172 (41%), Positives = 105/172 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+PQ++ + + RG C TQPRR++A+++A RVAQE + G
Sbjct: 424 VIVGDTGSGKTTQIPQYLHEAGYTK-RGKVGC---TQPRRVAAMSVAARVAQEMGVKLGH 479
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + + + Y T G+L + +P L+ S +++DE HER++ +D
Sbjct: 480 ---EVGYSIRFE-DCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDI 535
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KD+ R DLKL++ SAT++AEKFS +F API PG YPV+ Y
Sbjct: 536 LFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINY 587
Score = 118 (46.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++D+ R DLKL++ SAT++AEKFS +F API PG YPV+ Y
Sbjct: 540 VKDIARF-RPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINY 587
Score = 78 (32.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQ++ + + RG C TQPRR++A+++
Sbjct: 430 GSGKTTQIPQYLHEAGYTK-RGKVGC---TQPRRVAAMSV 465
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 320 (117.7 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 69/172 (40%), Positives = 108/172 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ ++ N+G + I TQPRR++A+++A RVA+E + G
Sbjct: 419 IIEGETGSGKTTQIPQYLFEEGYT-NKGMK--IACTQPRRVAAMSVAARVAREMGVKLG- 474
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + +R + Y T G+L S+P L+ S +++DE HER++ +D
Sbjct: 475 --NEVGYSIRFE-DCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDI 531
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KDV R +LK+++ SAT++ +FS FF AP+ IPG +PV +Y
Sbjct: 532 LFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFY 583
Score = 105 (42.0 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++DV R +LK+++ SAT++ +FS FF AP+ IPG +PV +Y
Sbjct: 536 IKDVARF-RPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFY 583
Score = 87 (35.7 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++ ++ N+G + I TQPRR++A+++
Sbjct: 421 EGETGSGKTTQIPQYLFEEGYT-NKGMK--IACTQPRRVAAMSV 461
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 73/177 (41%), Positives = 113/177 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ +TG GKTTQ+P+++ + +++ G I VTQPR+++AI++A+RVA+E +C
Sbjct: 53 IVTGNTGSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQRVAEEM--KCTL 106
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
GS VGYQ+R + + K +I Y T G L + + DP L+ S I++DE HER++ +D
Sbjct: 107 -GSKVGYQVRFD-DCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDI 164
Query: 193 LLAILKDV----TDKRKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK + + RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 165 LFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 221
Score = 109 (43.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 253 RKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 180 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 221
Score = 72 (30.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+++ + +++ G I VTQPR+++AI++ +
Sbjct: 59 GSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQR 97
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 323 (118.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 78/176 (44%), Positives = 108/176 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + A N G C TQPRR++A+++A+RV++E C
Sbjct: 562 IVVGETGSGKTTQLTQYLAEAGFA-NEGVIGC---TQPRRVAAMSVAKRVSEEVG--C-E 614
Query: 133 PGSSVGYQIRLEK-ELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
G VGY IR E P R I Y T G+L + DP L S I++DE HER++ +D
Sbjct: 615 LGQEVGYTIRFEDCTSPATR--IKYMTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATD 672
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L A+LK T +R DLK+I+ SATL+A+KFS +F PI IPG T+PV+ Y +D
Sbjct: 673 VLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKD 728
Score = 122 (48.0 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R DLK+I+ SATL+A+KFS +F PI IPG T+PV+ Y +D
Sbjct: 685 RPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKD 728
Score = 72 (30.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q++ + A N G C TQPRR++A+++ +
Sbjct: 568 GSGKTTQLTQYLAEAGFA-NEGVIGC---TQPRRVAAMSVAKR 606
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 316 (116.3 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 70/168 (41%), Positives = 101/168 (60%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGK+TQVPQ++L A C TQPRRI+ I++A+RV E Q G
Sbjct: 182 VVAGDTGCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKRVGFESLSQYG- 233
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S VGYQIR E I++ T G+L +Q +P L +++DE+HER + +DF
Sbjct: 234 --SQVGYQIRFESTRSAAT-KIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDF 290
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 240
LL +L+ + R DLK+ILMSAT+N FS +F AP++ +PG +P+
Sbjct: 291 LLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPI 338
Score = 115 (45.5 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 252 TRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
TR DLK+ILMSAT+N FS +F AP++ +PG +P+
Sbjct: 301 TRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPI 338
Score = 82 (33.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++L A C TQPRRI+ I+L +
Sbjct: 188 GCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKR 223
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 322 (118.4 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 76/175 (43%), Positives = 110/175 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GKTTQ+ Q+ ++ + R RG C TQPRR++A+++A+RVA+E C +
Sbjct: 560 VVVGETGSGKTTQMTQYAIEAGLGR-RGKIGC---TQPRRVAAMSVAKRVAEEYG--C-K 612
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G+ VGY IR E + + I Y T G+L DP LSG S I++DE HER++ +D
Sbjct: 613 LGTDVGYTIRFE-DCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDV 671
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR +LKLI+ SATL++ KFS++F API IPG T+PV+ Y +
Sbjct: 672 LFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTRE 726
Score = 113 (44.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R +LKLI+ SATL++ KFS++F API IPG T+PV+ Y +
Sbjct: 683 RPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTRE 726
Score = 76 (31.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q+ ++ + R RG C TQPRR++A+++ +
Sbjct: 566 GSGKTTQMTQYAIEAGLGR-RGKIGC---TQPRRVAAMSVAKR 604
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 322 (118.4 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 76/175 (43%), Positives = 110/175 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GKTTQ+ Q+ ++ + R RG C TQPRR++A+++A+RVA+E C +
Sbjct: 560 VVVGETGSGKTTQMTQYAIEAGLGR-RGKIGC---TQPRRVAAMSVAKRVAEEYG--C-K 612
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G+ VGY IR E + + I Y T G+L DP LSG S I++DE HER++ +D
Sbjct: 613 LGTDVGYTIRFE-DCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDV 671
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR +LKLI+ SATL++ KFS++F API IPG T+PV+ Y +
Sbjct: 672 LFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTRE 726
Score = 113 (44.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R +LKLI+ SATL++ KFS++F API IPG T+PV+ Y +
Sbjct: 683 RPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTRE 726
Score = 76 (31.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+ Q+ ++ + R RG C TQPRR++A+++ +
Sbjct: 566 GSGKTTQMTQYAIEAGLGR-RGKIGC---TQPRRVAAMSVAKR 604
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 321 (118.1 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 75/187 (40%), Positives = 108/187 (57%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGK+TQVPQ++L A C TQPRRI+ I++A+RV E Q G
Sbjct: 182 VVAGDTGCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKRVGFESLSQYG- 233
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S VGYQIR E I++ T G+L +Q +P L +++DE+HER + +DF
Sbjct: 234 --SQVGYQIRFESTRSAAT-KIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDF 290
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYL-EDVLNM 251
LL +L+ + R DLK+ILMSAT+N FS +F AP++ +PG +P+ Y ++
Sbjct: 291 LLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPT 350
Query: 252 TRKDLKL 258
T K KL
Sbjct: 351 TSKSEKL 357
Score = 118 (46.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 252 TRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
TR DLK+ILMSAT+N FS +F AP++ +PG +P+ Y
Sbjct: 301 TRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVY 342
Score = 82 (33.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++L A C TQPRRI+ I+L +
Sbjct: 188 GCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKR 223
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 318 (117.0 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 75/177 (42%), Positives = 113/177 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ +TG GKTTQ+P+++ + +++ G I VTQPR+++AI++A+RVA+E +C
Sbjct: 73 IVTGNTGSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQRVAEEM--KCTL 126
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
GS VGYQ+R + + K +I Y T G L + + DP LS S I++DE HER++ +D
Sbjct: 127 -GSKVGYQVRFD-DCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDI 184
Query: 193 LLAILK----DVTDKRKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK D + RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 185 LFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 109 (43.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 253 RKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 72 (30.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+++ + +++ G I VTQPR+++AI++ +
Sbjct: 79 GSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQR 117
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 69/172 (40%), Positives = 108/172 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ ++ N+G + I TQPRR++A+++A RVA+E + G
Sbjct: 419 IIEGETGSGKTTQIPQYLFEEGYT-NKGMK--IACTQPRRVAAMSVAARVAREMGVKLG- 474
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + +R + Y T G+L S+P L+ S +++DE HER++ +D
Sbjct: 475 --NEVGYSIRFE-DCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDI 531
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KDV R +LK+++ SAT++ +FS FF AP+ IPG +PV +Y
Sbjct: 532 LFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFY 583
Score = 105 (42.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++DV R +LK+++ SAT++ +FS FF AP+ IPG +PV +Y
Sbjct: 536 IKDVARF-RPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFY 583
Score = 87 (35.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++ ++ N+G + I TQPRR++A+++
Sbjct: 421 EGETGSGKTTQIPQYLFEEGYT-NKGMK--IACTQPRRVAAMSV 461
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 320 (117.7 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 75/187 (40%), Positives = 108/187 (57%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TGCGK+TQVPQ++L A C TQPRRI+ I++A+RV E Q G
Sbjct: 184 VVAGDTGCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKRVGFESLSQYG- 235
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S VGYQIR E I++ T G+L +Q +P L +++DE+HER + +DF
Sbjct: 236 --SQVGYQIRFESTRSAAT-KIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDF 292
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
LL +L+ + +R DLK+ILMSAT+N FS +F AP++ +PG +P+ Y + T
Sbjct: 293 LLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQT 352
Query: 253 R-KDLKL 258
K KL
Sbjct: 353 ASKSEKL 359
Score = 111 (44.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R DLK+ILMSAT+N FS +F AP++ +PG +P+ Y
Sbjct: 304 RPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVY 344
Score = 82 (33.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++L A C TQPRRI+ I+L +
Sbjct: 190 GCGKSTQVPQYLL----AAGFSHVAC---TQPRRIACISLAKR 225
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 319 (117.4 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 70/172 (40%), Positives = 108/172 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ ++ + +G + I TQPRR++A+++A RVA+E + G
Sbjct: 423 IIEGETGSGKTTQIPQYLFEEGYTK-KGMK--IACTQPRRVAAMSVAARVAREMGVKLG- 478
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + +R + Y T G+L S+P L+ S +++DE HER++ +D
Sbjct: 479 --NEVGYSIRFE-DCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDI 535
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KDV R +LK+++ SATL+ +FS FF API IPG +PV +Y
Sbjct: 536 LFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDIFY 587
Score = 108 (43.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++DV R +LK+++ SATL+ +FS FF API IPG +PV +Y
Sbjct: 540 IKDVARF-RPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDIFY 587
Score = 83 (34.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++ ++ + +G + I TQPRR++A+++
Sbjct: 425 EGETGSGKTTQIPQYLFEEGYTK-KGMK--IACTQPRRVAAMSV 465
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 318 (117.0 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 69/172 (40%), Positives = 108/172 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ ++ + +G + I TQPRR++A+++A RVA+E + G
Sbjct: 420 IIEGETGSGKTTQIPQYLFEEGYTK-KGMK--IACTQPRRVAAMSVAARVAREMGVKLG- 475
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + +R + Y T G+L S+P L+ S +++DE HER++ +D
Sbjct: 476 --NEVGYSIRFE-DCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDI 532
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KDV R +LK+++ SATL+ +FS FF AP+ IPG +PV +Y
Sbjct: 533 LFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFY 584
Score = 107 (42.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++DV R +LK+++ SATL+ +FS FF AP+ IPG +PV +Y
Sbjct: 537 IKDVARF-RPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFY 584
Score = 83 (34.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++ ++ + +G + I TQPRR++A+++
Sbjct: 422 EGETGSGKTTQIPQYLFEEGYTK-KGMK--IACTQPRRVAAMSV 462
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 318 (117.0 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 69/172 (40%), Positives = 108/172 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ ++ + +G + I TQPRR++A+++A RVA+E + G
Sbjct: 422 IIEGETGSGKTTQIPQYLFEEGYTK-KGMK--IACTQPRRVAAMSVAARVAREMGVKLG- 477
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + +R + Y T G+L S+P L+ S +++DE HER++ +D
Sbjct: 478 --NEVGYSIRFE-DCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDI 534
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KDV R +LK+++ SATL+ +FS FF AP+ IPG +PV +Y
Sbjct: 535 LFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFY 586
Score = 107 (42.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++DV R +LK+++ SATL+ +FS FF AP+ IPG +PV +Y
Sbjct: 539 IKDVARF-RPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFY 586
Score = 83 (34.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++ ++ + +G + I TQPRR++A+++
Sbjct: 424 EGETGSGKTTQIPQYLFEEGYTK-KGMK--IACTQPRRVAAMSV 464
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 317 (116.6 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 69/172 (40%), Positives = 110/172 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GKTTQ+ Q+I ++ + + G I TQPRR++A ++A+RV++E C +
Sbjct: 356 VIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIGCTQPRRVAAESVAKRVSEEVG--C-K 412
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGY IR E ++ + I Y T G+L +DP ++ S I++DE HER++ +D
Sbjct: 413 LGDTVGYTIRFE-DVTSENTVIKYMTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDV 471
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L A+LK+ + +LK+I+ SATL++ KFS++F PI+ IPG T+PV+ Y
Sbjct: 472 LFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCPIITIPGRTFPVEVLY 523
Score = 109 (43.4 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 255 DLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
+LK+I+ SATL++ KFS++F PI+ IPG T+PV+ Y
Sbjct: 485 NLKVIVTSATLDSNKFSRYFNNCPIITIPGRTFPVEVLY 523
Score = 77 (32.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISA 55
G GKTTQ+ Q+I ++ + + G I TQPRR++A
Sbjct: 362 GSGKTTQIVQYIYEEGMNKVGGQTKLIGCTQPRRVAA 398
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 315 (115.9 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 74/177 (41%), Positives = 113/177 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ +TG GKTTQ+P+++ + +++ G I VTQPR+++AI++A+RVA+E +C
Sbjct: 73 IVTGNTGSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQRVAEEM--KCTL 126
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
GS VGYQ+R + + K +I Y T G L + + DP L+ S I++DE HER++ +D
Sbjct: 127 -GSKVGYQVRFD-DCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDI 184
Query: 193 LLAILK----DVTDKRKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK D + RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 185 LFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 109 (43.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 253 RKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 72 (30.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+++ + +++ G I VTQPR+++AI++ +
Sbjct: 79 GSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQR 117
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 69/172 (40%), Positives = 108/172 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ ++ + +G + I TQPRR++A+++A RVA+E + G
Sbjct: 423 IIEGETGSGKTTQIPQYLFEEGYTQ-KGMK--IACTQPRRVAAMSVAARVAREMGVKLG- 478
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + +R + Y T G+L S+P L+ S +++DE HER++ +D
Sbjct: 479 --NEVGYSIRFE-DCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDI 535
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KDV R +LK+++ SATL+ +FS FF AP+ IPG +PV +Y
Sbjct: 536 LFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFY 587
Score = 107 (42.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++DV R +LK+++ SATL+ +FS FF AP+ IPG +PV +Y
Sbjct: 540 IKDVARF-RPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFY 587
Score = 82 (33.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++ ++ + +G + I TQPRR++A+++
Sbjct: 425 EGETGSGKTTQIPQYLFEEGYTQ-KGMK--IACTQPRRVAAMSV 465
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 69/172 (40%), Positives = 108/172 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ ++ + +G + I TQPRR++A+++A RVA+E + G
Sbjct: 423 IIEGETGSGKTTQIPQYLFEEGYTQ-KGMK--IACTQPRRVAAMSVAARVAREMGVKLG- 478
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E + +R + Y T G+L S+P L+ S +++DE HER++ +D
Sbjct: 479 --NEVGYSIRFE-DCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDI 535
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L ++KDV R +LK+++ SATL+ +FS FF AP+ IPG +PV +Y
Sbjct: 536 LFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFY 587
Score = 107 (42.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
++DV R +LK+++ SATL+ +FS FF AP+ IPG +PV +Y
Sbjct: 540 IKDVARF-RPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFY 587
Score = 82 (33.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+PQ++ ++ + +G + I TQPRR++A+++
Sbjct: 425 EGETGSGKTTQIPQYLFEEGYTQ-KGMK--IACTQPRRVAAMSV 465
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 313 (115.2 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 495 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 548
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 549 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 606
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 607 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 661
Score = 128 (50.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 618 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 661
Score = 73 (30.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 501 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 556
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 557 RFEDCTSPETVIKYMTDGMLLR----ECLI 582
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/107 (21%), Positives = 45/107 (42%)
Query: 2 HAFYAQSITYRLKEDLAGCGKTTQVPQFILDDEIARN-RGSECCIMVTQPRRISAIALIN 60
HAF +Y K L+ + +P F L +++ + ++ I++ +
Sbjct: 451 HAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGS-------G 503
Query: 61 KCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSE--CCI 105
K ++ L+ + YTS G TQ P+ + +A+ E CC+
Sbjct: 504 KTTQITQYLAEAG-YTSRGKIGCTQ-PRRVAAMSVAKRVSEEFGCCL 548
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 313 (115.2 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 78/209 (37%), Positives = 117/209 (55%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDE-IARNRGSECCIMV 107
Q +++ L N L L +I TGCGK+TQ+PQ++ + A R + V
Sbjct: 50 QRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGR----VVGV 105
Query: 108 TQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQ 167
TQPRR++A+++A RVA ER G VGY IR + + I + T G+L M
Sbjct: 106 TQPRRVAAVSVAGRVADERGAVLGH---EVGYCIRFDDCTDPQATRIKFLTDGMLVREMM 162
Query: 168 SDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG- 226
+DP+L+ S +++DE HER++ +D + +LK + KR DL+LI+ SATL+AEKF FF
Sbjct: 163 ADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQ 222
Query: 227 ---GAP------ILHIPGFTYPVQEYYLE 246
G P IL + G T+PV +Y++
Sbjct: 223 NDTGDPSKDTSVILTVEGRTFPVDIFYIQ 251
Score = 90 (36.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG----GAP------ILHIPGFTYPVQEYYLE 295
R DL+LI+ SATL+AEKF FF G P IL + G T+PV +Y++
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQ 251
Score = 82 (33.9 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 19 GCGKTTQVPQFILDDE-IARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+PQ++ + A R + VTQPRR++A+++ +
Sbjct: 80 GCGKSTQIPQYLAEAGWTAEGR----VVGVTQPRRVAAVSVAGR 119
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 313 (115.2 bits), Expect = 5.4e-27, P = 5.4e-27
Identities = 73/177 (41%), Positives = 113/177 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ +TG GKTTQ+P+++ + +++ G I VTQPR+++AI++A+RVA+E +C
Sbjct: 73 IVTGNTGSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQRVAEEM--KCAL 126
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
GS VGYQ+R + + K +I Y T G L + + DP L+ S I++DE HER++ +D
Sbjct: 127 -GSKVGYQVRFD-DCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDI 184
Query: 193 LLAILKDV----TDKRKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK + + RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 185 LFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 109 (43.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 253 RKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 72 (30.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+++ + +++ G I VTQPR+++AI++ +
Sbjct: 79 GSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQR 117
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 317 (116.6 bits), Expect = 5.9e-27, P = 5.9e-27
Identities = 75/188 (39%), Positives = 115/188 (61%)
Query: 70 SPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQ 129
S ++I TG GKTTQVPQ+ILD NR C I+VTQPRRI+AI+IA RVA ER
Sbjct: 159 SVTVIQGDTGSGKTTQVPQYILDHYARANRW--CNIVVTQPRRIAAISIARRVADERG-- 214
Query: 130 CGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
R G VGYQ+ ++K+ + + T G+L + + + ++ +H+++DE+HER
Sbjct: 215 -WRLGGIVGYQVGMDKQQSEDT-RLSFVTTGVLLQKLINTKNMNQFTHVILDEVHERDQE 272
Query: 190 SDF-LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG----G----APILHIPGFTYPV 240
+DF LL K + + +K++LMSATL++ F+ +F G AP++ + G +PV
Sbjct: 273 TDFALLVARKLLRSNSRHVKVVLMSATLDSSMFAGYFSIPVRGELAPAPVVTVEGRLFPV 332
Query: 241 QEYYLEDV 248
E+Y+ED+
Sbjct: 333 TEFYVEDL 340
Score = 116 (45.9 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 6 AQSITYRLKEDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
+ S+T ++ D G GKTTQVPQ+ILD NR C I+VTQPRRI+AI++ +
Sbjct: 157 SNSVTV-IQGD-TGSGKTTQVPQYILDHYARANRW--CNIVVTQPRRIAAISIARR 208
Score = 89 (36.4 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFG----G----APILHIPGFTYPVQEYYLEDV 297
+L + +K++LMSATL++ F+ +F G AP++ + G +PV E+Y+ED+
Sbjct: 283 LLRSNSRHVKVVLMSATLDSSMFAGYFSIPVRGELAPAPVVTVEGRLFPVTEFYVEDL 340
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 313 (115.2 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 75/182 (41%), Positives = 107/182 (58%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GK+TQVPQ + IA N GS I VTQPRR++AI++A RVA E G
Sbjct: 181 IVIGETGSGKSTQVPQLCVRAGIA-NSGS---IAVTQPRRVAAISLASRVATEMGTNIG- 235
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY +R E K I Y T GI+ P+L S +++DE HERS+ SD
Sbjct: 236 --GIVGYHVRFENATCHKT-KIEYMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDV 292
Query: 193 LLAILKDVTDKRKD----LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDV 248
L+ IL+ D+R++ L+LI+MSATL AEKF +F A ++ + G T+P++ +++
Sbjct: 293 LMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPK 352
Query: 249 LN 250
+N
Sbjct: 353 IN 354
Score = 111 (44.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 246 EDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 299
+D T L+LI+MSATL AEKF +F A ++ + G T+P++ +++ +N
Sbjct: 301 QDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKIN 354
Score = 96 (38.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-----LSPILSPSI 73
G GK+TQVPQ + IA N GS I VTQPRR++AI+L ++ T + I+ +
Sbjct: 187 GSGKSTQVPQLCVRAGIA-NSGS---IAVTQPRRVAAISLASRVATEMGTNIGGIVGYHV 242
Query: 74 IYTSTGCGKT 83
+ + C KT
Sbjct: 243 RFENATCHKT 252
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 313 (115.2 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 73/177 (41%), Positives = 113/177 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ +TG GKTTQ+P+++ + +++ G I VTQPR+++AI++A+RVA+E +C
Sbjct: 151 IVTGNTGSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQRVAEEM--KCAL 204
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
GS VGYQ+R + + K +I Y T G L + + DP L+ S I++DE HER++ +D
Sbjct: 205 -GSKVGYQVRFD-DCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDI 262
Query: 193 LLAILKDV----TDKRKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK + + RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 263 LFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 319
Score = 109 (43.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 253 RKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 278 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 319
Score = 72 (30.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+++ + +++ G I VTQPR+++AI++ +
Sbjct: 157 GSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQR 195
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 311 (114.5 bits), Expect = 7.0e-27, P = 7.0e-27
Identities = 69/187 (36%), Positives = 117/187 (62%)
Query: 69 LSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDE 128
L +++ TG GKTTQ+PQ++ + I+R +G I VTQPRR++AI++A RV+ E+
Sbjct: 90 LDNAVLIGETGSGKTTQIPQYLYEGGISR-QG---IIAVTQPRRVAAISLATRVSDEKRT 145
Query: 129 QCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSM 188
+ G+ VGY +R + ++ + I + T G+L SD +L S +++DE HER++
Sbjct: 146 ELGK---LVGYTVRFD-DVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTI 201
Query: 189 ISDFLLAILKDVTDKRKDL-----KLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEY 243
+D L ++K +RK+L K+I+MSAT++ + FSQ+F GAP+L++ G +P+Q +
Sbjct: 202 HTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVF 261
Query: 244 YLEDVLN 250
Y + N
Sbjct: 262 YTKQPQN 268
Score = 116 (45.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLN 299
LK+I+MSAT++ + FSQ+F GAP+L++ G +P+Q +Y + N
Sbjct: 225 LKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQN 268
Score = 95 (38.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQ++ + I+R +G I VTQPRR++AI+L +
Sbjct: 100 GSGKTTQIPQYLYEGGISR-QG---IIAVTQPRRVAAISLATR 138
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 315 (115.9 bits), Expect = 8.0e-27, P = 8.0e-27
Identities = 74/169 (43%), Positives = 104/169 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+PQ++ + +G C TQPRR++A++IA+RV++E C
Sbjct: 651 IVIGETGSGKTTQIPQYLHEANYTE-KGIVGC---TQPRRVAAMSIAKRVSEEFG--CIL 704
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR + + I Y T G+L SD +L+ S I++DE HER++ +D
Sbjct: 705 -GQEVGYSIRFD-DCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDI 762
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQ 241
L +LKDV KR D KLI+ SATL+AEKFS +F +PI IPG +PV+
Sbjct: 763 LFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVE 811
Score = 115 (45.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQ 290
L+DV+ R D KLI+ SATL+AEKFS +F +PI IPG +PV+
Sbjct: 767 LKDVVRK-RADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVE 811
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+PQ++ + +G C TQPRR++A+++ + IL + Y+
Sbjct: 657 GSGKTTQIPQYLHEANYTE-KGIVGC---TQPRRVAAMSIAKRVSEEFGCILGQEVGYSI 712
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSE 102
C + +++ D + R S+
Sbjct: 713 RFDDCTSNDTIIKYLTDGMLLRETLSD 739
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 315 (115.9 bits), Expect = 8.0e-27, P = 8.0e-27
Identities = 74/169 (43%), Positives = 104/169 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+PQ++ + +G C TQPRR++A++IA+RV++E C
Sbjct: 651 IVIGETGSGKTTQIPQYLHEANYTE-KGIVGC---TQPRRVAAMSIAKRVSEEFG--CIL 704
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR + + I Y T G+L SD +L+ S I++DE HER++ +D
Sbjct: 705 -GQEVGYSIRFD-DCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDI 762
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQ 241
L +LKDV KR D KLI+ SATL+AEKFS +F +PI IPG +PV+
Sbjct: 763 LFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVE 811
Score = 115 (45.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQ 290
L+DV+ R D KLI+ SATL+AEKFS +F +PI IPG +PV+
Sbjct: 767 LKDVVRK-RADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVE 811
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+PQ++ + +G C TQPRR++A+++ + IL + Y+
Sbjct: 657 GSGKTTQIPQYLHEANYTE-KGIVGC---TQPRRVAAMSIAKRVSEEFGCILGQEVGYSI 712
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSE 102
C + +++ D + R S+
Sbjct: 713 RFDDCTSNDTIIKYLTDGMLLRETLSD 739
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 311 (114.5 bits), Expect = 8.7e-27, P = 8.7e-27
Identities = 73/177 (41%), Positives = 113/177 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ +TG GKTTQ+P+++ + +++ G I VTQPR+++AI++A+RVA+E +C
Sbjct: 73 IVTGNTGSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQRVAEEM--KCTL 126
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
GS VGYQ+R + + K +I Y T G L + + DP L+ S I++DE HER++ +D
Sbjct: 127 -GSKVGYQVRFD-DCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDI 184
Query: 193 LLAILKDV----TDKRKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK + + RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 185 LFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 109 (43.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 253 RKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 72 (30.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+++ + +++ G I VTQPR+++AI++ +
Sbjct: 79 GSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQR 117
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 311 (114.5 bits), Expect = 8.7e-27, P = 8.7e-27
Identities = 73/177 (41%), Positives = 113/177 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ +TG GKTTQ+P+++ + +++ G I VTQPR+++AI++A+RVA+E +C
Sbjct: 73 IVTGNTGSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQRVAEEM--KCTL 126
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
GS VGYQ+R + + K +I Y T G L + + DP L+ S I++DE HER++ +D
Sbjct: 127 -GSKVGYQVRFD-DCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDI 184
Query: 193 LLAILKDV----TDKRKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK + + RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 185 LFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 109 (43.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 253 RKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 72 (30.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+++ + +++ G I VTQPR+++AI++ +
Sbjct: 79 GSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQR 117
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 311 (114.5 bits), Expect = 8.7e-27, P = 8.7e-27
Identities = 73/177 (41%), Positives = 113/177 (63%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ +TG GKTTQ+P+++ + +++ G I VTQPR+++AI++A+RVA+E +C
Sbjct: 73 IVTGNTGSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQRVAEEM--KCTL 126
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
GS VGYQ+R + + K +I Y T G L + + DP L+ S I++DE HER++ +D
Sbjct: 127 -GSKVGYQVRFD-DCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDI 184
Query: 193 LLAILKDV----TDKRKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK + + RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 185 LFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 109 (43.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 253 RKD-LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
RK+ LK+++MSAT+ K S FFG PI IPG YPV+E +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 72 (30.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+++ + +++ G I VTQPR+++AI++ +
Sbjct: 79 GSGKTTQLPKYLYEAGFSQH-GM---IGVTQPRKVAAISVAQR 117
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 313 (115.2 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 533 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 586
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 587 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 644
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 645 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 699
Score = 128 (50.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 656 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 699
Score = 73 (30.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 539 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 594
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 595 RFEDCTSPETVIKYMTDGMLLR----ECLI 620
Score = 37 (18.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 23/107 (21%), Positives = 45/107 (42%)
Query: 2 HAFYAQSITYRLKEDLAGCGKTTQVPQFILDDEIARN-RGSECCIMVTQPRRISAIALIN 60
HAF +Y K L+ + +P F L +++ + ++ I++ +
Sbjct: 489 HAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGS-------G 541
Query: 61 KCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSE--CCI 105
K ++ L+ + YTS G TQ P+ + +A+ E CC+
Sbjct: 542 KTTQITQYLAEAG-YTSRGKIGCTQ-PRRVAAMSVAKRVSEEFGCCL 586
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 313 (115.2 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 585 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 638
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 639 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 696
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 697 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 751
Score = 128 (50.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 708 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 751
Score = 73 (30.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 591 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 646
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 647 RFEDCTSPETVIKYMTDGMLLR----ECLI 672
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 313 (115.2 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 554 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 607
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 608 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 665
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 666 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 720
Score = 128 (50.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 677 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 720
Score = 73 (30.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 560 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 615
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 616 RFEDCTSPETVIKYMTDGMLLR----ECLI 641
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 313 (115.2 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 577 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 630
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 631 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 688
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 689 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 743
Score = 128 (50.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 700 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 743
Score = 73 (30.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 583 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 638
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 639 RFEDCTSPETVIKYMTDGMLLR----ECLI 664
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 313 (115.2 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 581 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 634
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 635 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 692
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 693 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 747
Score = 128 (50.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 704 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 747
Score = 73 (30.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 587 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 642
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 643 RFEDCTSPETVIKYMTDGMLLR----ECLI 668
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 313 (115.2 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 585 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 638
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 639 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 696
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 697 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 751
Score = 128 (50.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 708 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 751
Score = 73 (30.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 591 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 646
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 647 RFEDCTSPETVIKYMTDGMLLR----ECLI 672
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 313 (115.2 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 595 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 648
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 649 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 706
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 707 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 761
Score = 128 (50.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 718 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 761
Score = 73 (30.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 601 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 656
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 657 RFEDCTSPETVIKYMTDGMLLR----ECLI 682
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 313 (115.2 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 607 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 660
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 661 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 718
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 719 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 773
Score = 128 (50.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 730 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 773
Score = 73 (30.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 613 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 668
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 669 RFEDCTSPETVIKYMTDGMLLR----ECLI 694
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 313 (115.2 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/175 (42%), Positives = 107/175 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + +RG C TQPRR++A+++A+RV++E C
Sbjct: 609 IVIGETGSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFG--CCL 662
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L+ + I++DE HER++ +D
Sbjct: 663 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV 720
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 721 LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 775
Score = 128 (50.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R+D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 732 RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKE 775
Score = 73 (30.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + +RG C TQPRR++A+++ + L + YT
Sbjct: 615 GSGKTTQITQYLAEAGYT-SRGKIGC---TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 670
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 671 RFEDCTSPETVIKYMTDGMLLR----ECLI 696
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 311 (114.5 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 75/175 (42%), Positives = 104/175 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+ Q++ + RG C TQPRR++A+++A+RV++E C
Sbjct: 575 IVIGETGSGKTTQITQYLAEAGYT-TRGKIGC---TQPRRVAAMSVAKRVSEEYG--CCL 628
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L DP L + I++DE HER++ +D
Sbjct: 629 -GQEVGYTIRFE-DCTSPETVIKYMTDGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDV 686
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK KR D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 687 LFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKE 741
Score = 127 (49.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R D+KLI+ SATL+A KFSQ+F API IPG TYPV+ Y ++
Sbjct: 698 RTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKE 741
Score = 71 (30.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 26/90 (28%), Positives = 41/90 (45%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + RG C TQPRR++A+++ + L + YT
Sbjct: 581 GSGKTTQITQYLAEAGYT-TRGKIGC---TQPRRVAAMSVAKRVSEEYGCCLGQEVGYTI 636
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCI 105
C V +++ D + R EC I
Sbjct: 637 RFEDCTSPETVIKYMTDGMLLR----ECLI 662
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 307 (113.1 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 67/181 (37%), Positives = 112/181 (61%)
Query: 69 LSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDE 128
L +++ TG GKTTQ+PQ++ + I R + I VTQPRR++AI++A RV+ E+
Sbjct: 97 LDSAVLIGETGSGKTTQIPQYLYEGGIGR----QAIIAVTQPRRVAAISLATRVSDEKRT 152
Query: 129 QCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSM 188
+ G+ VGY +R + ++ I + T G+L SD +L S I++DE HER++
Sbjct: 153 ELGK---LVGYTVRFD-DVTSDDTKIKFLTDGMLLREAISDCLLRKYSCIILDEAHERTL 208
Query: 189 ISDFLLAILKDVTDKRKDL-----KLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEY 243
+D L ++K +RK+L K+++MSAT++ + FSQ+F GAP+L++ G +P+Q +
Sbjct: 209 HTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQIF 268
Query: 244 Y 244
Y
Sbjct: 269 Y 269
Score = 111 (44.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 18/38 (47%), Positives = 31/38 (81%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
LK+++MSAT++ + FSQ+F GAP+L++ G +P+Q +Y
Sbjct: 232 LKVLVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQIFY 269
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALIN-----KCLTLSPILSPSI 73
G GKTTQ+PQ++ + I R + I VTQPRR++AI+L K L ++ ++
Sbjct: 107 GSGKTTQIPQYLYEGGIGR----QAIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTV 162
Query: 74 IYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQER 126
+ T++ +F+ D + R S+C + R+ S I + E A ER
Sbjct: 163 RFDDV-TSDDTKI-KFLTDGMLLREAISDCLL-----RKYSCIILDE--AHER 206
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 310 (114.2 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 69/174 (39%), Positives = 104/174 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+PQ++ + +N C TQPRR++A+++A RVA+E + G
Sbjct: 501 IIVGETGSGKTTQLPQYLHEAGYTKNGMKVGC---TQPRRVAAMSVAARVAEEMGVKLG- 556
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ VGY IR E K + Y T G+L + ++P L S +++DE HER++ +D
Sbjct: 557 --NEVGYSIRFEDNTSDKT-VLKYMTDGMLLRELLTEPDLGQYSALMIDEAHERTVPTDI 613
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 246
+LKD+ R DLKL++ SAT++A+KF +F API +IPG Y V +Y +
Sbjct: 614 ACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGRMYNVDIHYTQ 667
Score = 116 (45.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 295
L+D+ R DLKL++ SAT++A+KF +F API +IPG Y V +Y +
Sbjct: 618 LKDIAK-ARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGRMYNVDIHYTQ 667
Score = 75 (31.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+PQ++ + +N C TQPRR++A+++
Sbjct: 507 GSGKTTQLPQYLHEAGYTKNGMKVGC---TQPRRVAAMSV 543
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 306 (112.8 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 73/176 (41%), Positives = 104/176 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I TG GK+TQ+ Q IL G I +TQPRR++A+++A RVAQE D G
Sbjct: 24 VIIGETGSGKSTQLSQ-ILHRHGYTKSG---VIAITQPRRVAAVSVARRVAQELDVPLGE 79
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E K I Y T G+L S+P+L S I++DE HERS+ +D
Sbjct: 80 ---DVGYAIRFEDRTTSKT-RIKYLTDGVLLRESLSNPMLDDYSVIILDEAHERSLNTDI 135
Query: 193 LLAILKDVTDKR-KDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
LL ++K + R + K+++ SATL+ EK S+FF G P+L++PG YPV+ Y ++
Sbjct: 136 LLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEILYSKE 191
Score = 113 (44.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
++ + + K+++ SATL+ EK S+FF G P+L++PG YPV+ Y ++
Sbjct: 143 LVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEILYSKE 191
Score = 59 (25.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ+ Q IL G I +TQPRR++A+++ +
Sbjct: 30 GSGKSTQLSQ-ILHRHGYTKSG---VIAITQPRRVAAVSVARR 68
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 68/154 (44%), Positives = 100/154 (64%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TGCGKTTQVPQ+ILD+ A G C I+VTQPRRI+AI+IA RV QER+ Q
Sbjct: 135 IIKGETGCGKTTQVPQYILDE--AYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQ--- 189
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+ +Q+ L + + +LYCT G+L + ++ L+ +HIV+DE+HER DF
Sbjct: 190 QNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDF 249
Query: 193 LLAILKDV-TDKRKDLKLILMSATLNAEKFSQFF 225
LL +++ + + +K+ILMSAT++A++ S +F
Sbjct: 250 LLIVVRRLLATNSRHVKIILMSATIDAKELSDYF 283
Score = 135 (52.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGKTTQVPQ+ILD+ A G C I+VTQPRRI+AI++ N+
Sbjct: 141 GCGKTTQVPQYILDE--AYKSGKYCNIVVTQPRRIAAISIANR 181
Score = 58 (25.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFF 274
+L + +K+ILMSAT++A++ S +F
Sbjct: 257 LLATNSRHVKIILMSATIDAKELSDYF 283
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 306 (112.8 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 79/209 (37%), Positives = 114/209 (54%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDE-IARNRGSECCIMV 107
Q +++ L N L L +I TGCGK+TQ+PQ++ + A R + V
Sbjct: 50 QRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGR----VVGV 105
Query: 108 TQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQ 167
TQPRR++A+ +A RVA+ER G VGY IR + I + T G+L M
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGH---EVGYCIRFDDCTDPLATRIKFLTDGMLVREMM 162
Query: 168 SDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG- 226
DP+L+ S I++DE HER++ +D + +LK + KR DL+LI+ SATL+AEKF FF
Sbjct: 163 VDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQ 222
Query: 227 ----GAP-----ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 223 NDTSDPPRDTCVILTVEGRTFPVDIFYLQ 251
Score = 86 (35.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG-----GAP-----ILHIPGFTYPVQEYYLE 295
R DL+LI+ SATL+AEKF FF P IL + G T+PV +YL+
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQ 251
Score = 81 (33.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 19 GCGKTTQVPQFILDDE-IARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+PQ++ + A R + VTQPRR++A+ + +
Sbjct: 80 GCGKSTQIPQYLAEAGWTAEGR----VVGVTQPRRVAAVTVAGR 119
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 305 (112.4 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 78/209 (37%), Positives = 115/209 (55%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDE-IARNRGSECCIMV 107
Q +++ L N L L +I TGCGK+TQ+PQ++ + A R + V
Sbjct: 50 QRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGR----VVGV 105
Query: 108 TQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQ 167
TQPRR++A+ +A RVA+ER G VGY IR + + I + T G+L M
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGH---EVGYCIRFDDCTDQLATRIKFLTDGMLVREMM 162
Query: 168 SDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG- 226
DP+L+ S I++DE HER++ +D + +LK + KR DL+LI+ SATL+A+KF FF
Sbjct: 163 VDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 222
Query: 227 ---GAP------ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 83 (34.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG----GAP------ILHIPGFTYPVQEYYLE 295
R DL+LI+ SATL+A+KF FF P IL + G T+PV +YL+
Sbjct: 199 RGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 81 (33.6 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 19 GCGKTTQVPQFILDDE-IARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+PQ++ + A R + VTQPRR++A+ + +
Sbjct: 80 GCGKSTQIPQYLAEAGWTAEGR----VVGVTQPRRVAAVTVAGR 119
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 305 (112.4 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 79/209 (37%), Positives = 114/209 (54%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDE-IARNRGSECCIMV 107
Q +++ L N L L +I TGCGK+TQ+PQ++ + A R + V
Sbjct: 50 QRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGR----VVGV 105
Query: 108 TQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQ 167
TQPRR++A+ +A RVA+ER G VGY IR + I + T G+L M
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGH---EVGYCIRFDDCTNPLATRIKFLTDGMLVREMM 162
Query: 168 SDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG- 226
DP+L+ S I++DE HER++ +D + +LK + KR DL+LI+ SATL+AEKF FF
Sbjct: 163 VDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNH 222
Query: 227 ---GAP------ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 223 NDTSDPTRDTCVILTVEGRTFPVDIFYLQ 251
Score = 86 (35.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG----GAP------ILHIPGFTYPVQEYYLE 295
R DL+LI+ SATL+AEKF FF P IL + G T+PV +YL+
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQ 251
Score = 81 (33.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 19 GCGKTTQVPQFILDDE-IARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+PQ++ + A R + VTQPRR++A+ + +
Sbjct: 80 GCGKSTQIPQYLAEAGWTAEGR----VVGVTQPRRVAAVTVAGR 119
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 305 (112.4 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 78/209 (37%), Positives = 115/209 (55%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDE-IARNRGSECCIMV 107
Q +++ L N L L +I TGCGK+TQ+PQ++ + A R + V
Sbjct: 50 QRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGR----VVGV 105
Query: 108 TQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQ 167
TQPRR++A+ +A RVA+ER G VGY IR + + I + T G+L M
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGH---EVGYCIRFDDCTDQLATRIKFLTDGMLVREMM 162
Query: 168 SDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG- 226
DP+L+ S I++DE HER++ +D + +LK + KR DL+LI+ SATL+A+KF FF
Sbjct: 163 VDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 222
Query: 227 ---GAP------ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 83 (34.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG----GAP------ILHIPGFTYPVQEYYLE 295
R DL+LI+ SATL+A+KF FF P IL + G T+PV +YL+
Sbjct: 199 RGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 81 (33.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 19 GCGKTTQVPQFILDDE-IARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+PQ++ + A R + VTQPRR++A+ + +
Sbjct: 80 GCGKSTQIPQYLAEAGWTAEGR----VVGVTQPRRVAAVTVAGR 119
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 304 (112.1 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 79/206 (38%), Positives = 113/206 (54%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVT 108
Q +R+ N L L +I TG GK+TQ+PQ++L+ A G I VT
Sbjct: 40 QRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAE-GK--VIGVT 96
Query: 109 QPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQS 168
QPRR++A ++A RVA+ER G VGY IR + I + T G+L M S
Sbjct: 97 QPRRVAATSVATRVAEERGAFLGH---EVGYTIRFDDCSDPHATRIKFLTDGMLVREMMS 153
Query: 169 DPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF--- 225
DP+L S +++DE HER++ +D + +LK + KR+DL+LI+ SATL+A+KF FF
Sbjct: 154 DPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLN 213
Query: 226 --GGAP-----ILHIPGFTYPVQEYY 244
G A IL + G T+PV +Y
Sbjct: 214 ESGDASKDTCGILTVEGRTFPVDIFY 239
Score = 85 (35.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFF-----GGAP-----ILHIPGFTYPVQEYY 293
L+ +L R+DL+LI+ SATL+A+KF FF G A IL + G T+PV +Y
Sbjct: 182 LKKILKK-RRDLRLIVASATLDAKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFY 239
Score = 76 (31.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ+PQ++L+ A G I VTQPRR++A ++ +
Sbjct: 70 GSGKSTQIPQYLLEAGWAAE-GK--VIGVTQPRRVAATSVATR 109
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 304 (112.1 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 68/181 (37%), Positives = 114/181 (62%)
Query: 69 LSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDE 128
L +++ TG GKTTQ+PQ++ + I+R +G I VTQPRR++AI++A RV+ E+
Sbjct: 81 LDNAVLIGETGSGKTTQIPQYLYEGGISR-QG---IIAVTQPRRVAAISLATRVSDEKRT 136
Query: 129 QCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSM 188
+ G+ VGY +R E ++ + I + T G+L SD +L S +++DE HER++
Sbjct: 137 ELGK---LVGYTVRFE-DVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTI 192
Query: 189 ISDFLLAILKDVTDKRKDL-----KLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEY 243
+D L ++K +RK+L K+I+MSAT++ + FSQ+F AP+L++ G +P+Q +
Sbjct: 193 HTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIF 252
Query: 244 Y 244
Y
Sbjct: 253 Y 253
Score = 105 (42.0 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
LK+I+MSAT++ + FSQ+F AP+L++ G +P+Q +Y
Sbjct: 216 LKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFY 253
Score = 95 (38.5 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQ++ + I+R +G I VTQPRR++AI+L +
Sbjct: 91 GSGKTTQIPQYLYEGGISR-QG---IIAVTQPRRVAAISLATR 129
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 303 (111.7 bits), Expect = 4.6e-26, P = 4.6e-26
Identities = 79/209 (37%), Positives = 113/209 (54%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDE-IARNRGSECCIMV 107
Q +++ L N L L +I TGCGK+TQVPQ++ + A R + V
Sbjct: 50 QRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGR----VVGV 105
Query: 108 TQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQ 167
TQPRR++A+ +A RVA ER G VGY IR + I + T G+L M
Sbjct: 106 TQPRRVAAVTVAGRVADERGAVLGH---EVGYCIRFDDCTDPLATRIKFLTDGMLVREMM 162
Query: 168 SDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG- 226
DP+L+ S +++DE HER++ +D + +LK + KR DL+LI+ SATL+AEKF FF
Sbjct: 163 VDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQ 222
Query: 227 ---GAP------ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 86 (35.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG----GAP------ILHIPGFTYPVQEYYLE 295
R DL+LI+ SATL+AEKF FF P IL + G T+PV +YL+
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 82 (33.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 19 GCGKTTQVPQFILDDE-IARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++ + A R + VTQPRR++A+ + +
Sbjct: 80 GCGKSTQVPQYLAEAGWTAEGR----VVGVTQPRRVAAVTVAGR 119
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 303 (111.7 bits), Expect = 4.9e-26, P = 4.9e-26
Identities = 78/209 (37%), Positives = 114/209 (54%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDE-IARNRGSECCIMV 107
Q +++ L N L L +I TGCGK+TQ+PQ++ + A R + V
Sbjct: 42 QRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGR----VVGV 97
Query: 108 TQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQ 167
TQPRR++A+ +A RVA+ER G VGY IR + I + T G+L M
Sbjct: 98 TQPRRVAAVTVAGRVAEERGAVLGH---EVGYCIRFDDCTDPLATRIKFLTDGMLVREMM 154
Query: 168 SDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG- 226
DP+L+ S I++DE HER++ +D + +LK + KR DL+L++ SATL+AEKF FF
Sbjct: 155 VDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQ 214
Query: 227 ---GAP------ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 215 NETSDPTRDTCVILTVEGRTFPVDIFYLQ 243
Score = 84 (34.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG----GAP------ILHIPGFTYPVQEYYLE 295
R DL+L++ SATL+AEKF FF P IL + G T+PV +YL+
Sbjct: 191 RGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQ 243
Score = 81 (33.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 19 GCGKTTQVPQFILDDE-IARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+PQ++ + A R + VTQPRR++A+ + +
Sbjct: 72 GCGKSTQIPQYLAEAGWTAEGR----VVGVTQPRRVAAVTVAGR 111
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 303 (111.7 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 78/209 (37%), Positives = 114/209 (54%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDE-IARNRGSECCIMV 107
Q +++ L N L L +I TGCGK+TQ+PQ++ + A R + V
Sbjct: 50 QRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGR----VVGV 105
Query: 108 TQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQ 167
TQPRR++A+ +A RVA+ER G VGY IR + I + T G+L M
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGH---EVGYCIRFDDCTDPLATRIKFLTDGMLVREMM 162
Query: 168 SDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG- 226
DP+L+ S I++DE HER++ +D + +LK + KR DL+L++ SATL+AEKF FF
Sbjct: 163 VDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQ 222
Query: 227 ---GAP------ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 223 NETSDPTRDTCVILTVEGRTFPVDIFYLQ 251
Score = 84 (34.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG----GAP------ILHIPGFTYPVQEYYLE 295
R DL+L++ SATL+AEKF FF P IL + G T+PV +YL+
Sbjct: 199 RGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQ 251
Score = 81 (33.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 19 GCGKTTQVPQFILDDE-IARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQ+PQ++ + A R + VTQPRR++A+ + +
Sbjct: 80 GCGKSTQIPQYLAEAGWTAEGR----VVGVTQPRRVAAVTVAGR 119
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 303 (111.7 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 79/209 (37%), Positives = 113/209 (54%)
Query: 49 QPRRISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDE-IARNRGSECCIMV 107
Q +++ L N L L +I TGCGK+TQVPQ++ + A R + V
Sbjct: 50 QRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGR----VVGV 105
Query: 108 TQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQ 167
TQPRR++A+ +A RVA ER G VGY IR + I + T G+L M
Sbjct: 106 TQPRRVAAVTVAGRVADERGAVLGH---EVGYCIRFDDCTDPLATRIKFLTDGMLVREMM 162
Query: 168 SDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG- 226
DP+L+ S +++DE HER++ +D + +LK + KR DL+LI+ SATL+AEKF FF
Sbjct: 163 VDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQ 222
Query: 227 ---GAP------ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 86 (35.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG----GAP------ILHIPGFTYPVQEYYLE 295
R DL+LI+ SATL+AEKF FF P IL + G T+PV +YL+
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 82 (33.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 19 GCGKTTQVPQFILDDE-IARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++ + A R + VTQPRR++A+ + +
Sbjct: 80 GCGKSTQVPQYLAEAGWTAEGR----VVGVTQPRRVAAVTVAGR 119
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 307 (113.1 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 79/187 (42%), Positives = 110/187 (58%)
Query: 61 KCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAE 120
K +T + IL I+ TG GKTTQ+ Q++ + RG C TQPRR++A+++A+
Sbjct: 597 KAVTDNQIL---IVIGETGSGKTTQITQYLGECGFTA-RGKIGC---TQPRRVAAMSVAK 649
Query: 121 RVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVM 180
RVA+E C R G VGY IR E + I Y T G+L + L S I++
Sbjct: 650 RVAEEYG--C-RLGQEVGYTIRFE-DCTSPETIIKYMTDGMLLRECLMEAELKSYSVIML 705
Query: 181 DEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 240
DE HER++ +D L +LK KR +LKLI+ SATL+A KFSQ+F API IPG T+PV
Sbjct: 706 DEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPV 765
Query: 241 QEYYLED 247
+ Y ++
Sbjct: 766 EVLYTKE 772
Score = 121 (47.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R +LKLI+ SATL+A KFSQ+F API IPG T+PV+ Y ++
Sbjct: 729 RPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKE 772
Score = 74 (31.1 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 30/111 (27%), Positives = 50/111 (45%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLT-LSPILSPSIIYTS 77
G GKTTQ+ Q++ + RG C TQPRR++A+++ + L + YT
Sbjct: 612 GSGKTTQITQYLGECGFTA-RGKIGC---TQPRRVAAMSVAKRVAEEYGCRLGQEVGYTI 667
Query: 78 T--GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQER 126
C + +++ D + R C+M + + S I + E A ER
Sbjct: 668 RFEDCTSPETIIKYMTDGMLLRE-----CLMEAELKSYSVIMLDE--AHER 711
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 307 (113.1 bits), Expect = 5.7e-26, P = 5.7e-26
Identities = 72/190 (37%), Positives = 110/190 (57%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+P+ ++ RG + I TQPRR++A +A R+A+E +
Sbjct: 97 IVAGETGSGKTTQLPKICME----LGRGIKGLIGHTQPRRLAARTVANRIAEELKTE--- 149
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG +GY++R + + T GIL +Q D +L I++DE HERS+ DF
Sbjct: 150 PGGCIGYKVRFSDHVSDNT-MVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY---LEDVL 249
LL LK++ +R DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y +E+
Sbjct: 209 LLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEAD 268
Query: 250 NMTRKDLKLI 259
+ R L+ I
Sbjct: 269 DTERDQLQAI 278
Score = 121 (47.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 244 YLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
YL+++L R DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y
Sbjct: 212 YLKELLPR-RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRY 260
Score = 69 (29.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+ ++ RG + I TQPRR++A + N+
Sbjct: 103 GSGKTTQLPKICME----LGRGIKGLIGHTQPRRLAARTVANR 141
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 306 (112.8 bits), Expect = 7.3e-26, P = 7.3e-26
Identities = 74/173 (42%), Positives = 103/173 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+P+ L+ RG + I TQPRRI+A ++A R+A E R
Sbjct: 94 IVCGETGSGKTTQLPKICLE----AGRGIQGYIGHTQPRRIAARSVAARIADELK----R 145
Query: 133 P-GSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
P G +VGY++R + R I T GIL Q+D L +++DE HERS+ D
Sbjct: 146 PLGETVGYKVRFHDQT-RPDSLIKLMTDGILLAETQTDRFLDQYDTLIVDEAHERSLNID 204
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
FLL LK + +R DLKL++ SAT++ E+FS+ F API+ +PG TYPV+ Y
Sbjct: 205 FLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYPVEIRY 257
Score = 121 (47.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 244 YLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
YL+ +L R DLKL++ SAT++ E+FS+ F API+ +PG TYPV+ Y
Sbjct: 209 YLKWLLPR-RHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYPVEIRY 257
Score = 69 (29.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISA 55
G GKTTQ+P+ L+ RG + I TQPRRI+A
Sbjct: 100 GSGKTTQLPKICLE----AGRGIQGYIGHTQPRRIAA 132
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 305 (112.4 bits), Expect = 8.0e-26, P = 8.0e-26
Identities = 78/229 (34%), Positives = 133/229 (58%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GK+TQ+ Q++ + + G+ C TQPRRI+ IAIA RVA+E + + G+
Sbjct: 458 ILVGETGSGKSTQLTQYLYECKY-HMYGNIIC---TQPRRIACIAIANRVAEEMNVKIGK 513
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR + + I+Y T G+ ++ +P L +S +++DE HER++ +D
Sbjct: 514 ---EVGYVIRFQNKTSEAT-KIMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDV 569
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
+L I+KD+ + R+++++++ SATL+AEK S +F API ++PG Y V YY +N
Sbjct: 570 ILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYY---TINNE 626
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQ--EYYLEDVLN 299
+ I++ T+ +Q G ++ +PG Y ++ + LE+ LN
Sbjct: 627 SNYISAIVI--TILQIHITQGKGDI-LVFLPG-QYEIELVQQELENKLN 671
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 305 (112.4 bits), Expect = 8.0e-26, P = 8.0e-26
Identities = 78/229 (34%), Positives = 133/229 (58%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GK+TQ+ Q++ + + G+ C TQPRRI+ IAIA RVA+E + + G+
Sbjct: 458 ILVGETGSGKSTQLTQYLYECKY-HMYGNIIC---TQPRRIACIAIANRVAEEMNVKIGK 513
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR + + I+Y T G+ ++ +P L +S +++DE HER++ +D
Sbjct: 514 ---EVGYVIRFQNKTSEAT-KIMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDV 569
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
+L I+KD+ + R+++++++ SATL+AEK S +F API ++PG Y V YY +N
Sbjct: 570 ILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYY---TINNE 626
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQ--EYYLEDVLN 299
+ I++ T+ +Q G ++ +PG Y ++ + LE+ LN
Sbjct: 627 SNYISAIVI--TILQIHITQGKGDI-LVFLPG-QYEIELVQQELENKLN 671
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 305 (112.4 bits), Expect = 9.3e-26, P = 9.3e-26
Identities = 76/187 (40%), Positives = 106/187 (56%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+P+ L+ + GS I TQPRR++A ++A RVA+E G
Sbjct: 96 IIAGETGSGKTTQLPKICLELGL----GSRGFIGHTQPRRLAARSVASRVAEELQSPLGE 151
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VG+++R L + I T GIL + SD L I++DE HERS+ DF
Sbjct: 152 V---VGFKVRFADAL-KSESYIKLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDF 207
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
+L LK + KR DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y ++ T
Sbjct: 208 ILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRY-RPLVQDT 266
Query: 253 RKDLKLI 259
DL I
Sbjct: 267 EADLDQI 273
Score = 125 (49.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 244 YLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
YL+ +L R DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y
Sbjct: 211 YLKQILKK-RPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRY 259
Score = 64 (27.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+ L+ + GS I TQPRR++A ++ ++
Sbjct: 102 GSGKTTQLPKICLELGL----GSRGFIGHTQPRRLAARSVASR 140
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 305 (112.4 bits), Expect = 9.3e-26, P = 9.3e-26
Identities = 76/187 (40%), Positives = 106/187 (56%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+P+ L+ + GS I TQPRR++A ++A RVA+E G
Sbjct: 96 IIAGETGSGKTTQLPKICLELGL----GSRGFIGHTQPRRLAARSVASRVAEELQSPLGE 151
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VG+++R L + I T GIL + SD L I++DE HERS+ DF
Sbjct: 152 V---VGFKVRFADAL-KSESYIKLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDF 207
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDVLNMT 252
+L LK + KR DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y ++ T
Sbjct: 208 ILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRY-RPLVQDT 266
Query: 253 RKDLKLI 259
DL I
Sbjct: 267 EADLDQI 273
Score = 125 (49.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 244 YLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
YL+ +L R DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y
Sbjct: 211 YLKQILKK-RPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRY 259
Score = 64 (27.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+ L+ + GS I TQPRR++A ++ ++
Sbjct: 102 GSGKTTQLPKICLELGL----GSRGFIGHTQPRRLAARSVASR 140
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 300 (110.7 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 74/182 (40%), Positives = 112/182 (61%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TGCGK+TQVPQF+L+ A + G + I++TQPRR++ + +A RVA+E+D C
Sbjct: 97 IIVGETGCGKSTQVPQFLLEAGWAAD-GRQ--IVITQPRRVAVVTLATRVAEEKD--CIL 151
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY +R + ++ K + + T G+L + +DP+LS S I++DE HERS +D
Sbjct: 152 -GHDVGYTVRFD-DVSDKDTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDI 209
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFF-----GG-----APILHIPGFTYPVQE 242
LL +L+ + R DL++I+ SATL+AE F FF G A I+ + G T+PV
Sbjct: 210 LLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAV 269
Query: 243 YY 244
++
Sbjct: 270 HH 271
Score = 100 (40.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINKCLTLSP-ILSPSIIYT- 76
GCGK+TQVPQF+L+ A + G + I++TQPRR++ + L + IL + YT
Sbjct: 103 GCGKSTQVPQFLLEAGWAAD-GRQ--IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTV 159
Query: 77 --STGCGKTTQVPQFILDDEIAR 97
K T+V +F+ D + R
Sbjct: 160 RFDDVSDKDTKV-KFMTDGLLLR 181
Score = 69 (29.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 253 RKDLKLILMSATLNAEKFSQFF-----GG-----APILHIPGFTYPVQEYY 293
R DL++I+ SATL+AE F FF G A I+ + G T+PV ++
Sbjct: 221 RNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHH 271
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 302 (111.4 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 71/175 (40%), Positives = 104/175 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GKTTQ+ Q++ + RG C TQPRR++A+++++RVA+E Q G+
Sbjct: 528 VVIGETGSGKTTQMAQYLAEAGYG-TRGKIGC---TQPRRVAAMSVSKRVAEEFGCQLGQ 583
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY IR E + I + T GIL DP LS S I++DE HER++ +D
Sbjct: 584 ---EVGYAIRFE-DCTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDV 639
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L +LK +R +LK+++ SATL AEKFS++F A + IPG T+PV Y +D
Sbjct: 640 LFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKD 694
Score = 110 (43.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 296
R +LK+++ SATL AEKFS++F A + IPG T+PV Y +D
Sbjct: 651 RPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKD 694
Score = 67 (28.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GKTTQ+ Q++ + RG C TQPRR++A+++
Sbjct: 534 GSGKTTQMAQYLAEAGYG-TRGKIGC---TQPRRVAAMSV 569
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 299 (110.3 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 68/172 (39%), Positives = 103/172 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+P+ + RG I TQPRR++A ++A R+A+E + + G
Sbjct: 107 IVAGETGSGKTTQLPKICAE----LGRGKYGLIGHTQPRRLAARSVANRIAEEMETELG- 161
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY++R ++ + I T GIL +Q+D L+ I++DE HERS+ DF
Sbjct: 162 --GFVGYKVRFTDQISDQT-QIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDF 218
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
+L LK + +R DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y
Sbjct: 219 ILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRY 270
Score = 118 (46.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 244 YLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
YL+ +L R DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y
Sbjct: 222 YLKQLLPR-RPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRY 270
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+ + RG I TQPRR++A ++ N+
Sbjct: 113 GSGKTTQLPKICAE----LGRGKYGLIGHTQPRRLAARSVANR 151
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 299 (110.3 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 68/172 (39%), Positives = 103/172 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GKTTQ+P+ + RG I TQPRR++A ++A R+A+E + + G
Sbjct: 107 IVAGETGSGKTTQLPKICAE----LGRGKYGLIGHTQPRRLAARSVANRIAEEMETELG- 161
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY++R ++ + I T GIL +Q+D L+ I++DE HERS+ DF
Sbjct: 162 --GFVGYKVRFTDQISDQT-QIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDF 218
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
+L LK + +R DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y
Sbjct: 219 ILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRY 270
Score = 118 (46.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 244 YLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
YL+ +L R DLK+I+ SAT++ E+FS+ F API+ + G TYPV+ Y
Sbjct: 222 YLKQLLPR-RPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRY 270
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+ + RG I TQPRR++A ++ N+
Sbjct: 113 GSGKTTQLPKICAE----LGRGKYGLIGHTQPRRLAARSVANR 151
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 293 (108.2 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 67/172 (38%), Positives = 109/172 (63%)
Query: 78 TGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGRPGSSV 137
TG GKTTQ+PQ++ + I R +G I VTQPRR++AI++A RV+ E+ + G+ V
Sbjct: 8 TGSGKTTQLPQYLYEGGIGR-QG---VIAVTQPRRVAAISLATRVSDEKRTELGK---LV 60
Query: 138 GYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDFLLAIL 197
GY +R + ++ + I + T G+L SD +L S I++DE HER++ +D L ++
Sbjct: 61 GYTVRFD-DVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVV 119
Query: 198 KDVTDKRKDL-----KLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
K +RK+L K+I+MSAT++ + FSQ+F GA +L++ G +P+Q +Y
Sbjct: 120 KAAQRRRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFY 171
Score = 106 (42.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 256 LKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
LK+I+MSAT++ + FSQ+F GA +L++ G +P+Q +Y
Sbjct: 134 LKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFY 171
Score = 92 (37.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+PQ++ + I R +G I VTQPRR++AI+L +
Sbjct: 9 GSGKTTQLPQYLYEGGIGR-QG---VIAVTQPRRVAAISLATR 47
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 294 (108.6 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 71/181 (39%), Positives = 107/181 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TG GK+TQVPQ++ + +G I +T+PRR+S + +A RVAQER E G
Sbjct: 67 ILVGETGSGKSTQVPQYLYEWGW-HTKG---LIGITEPRRVSTVTLANRVAQERGELVG- 121
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
+VGY +R + + I + T GIL + +DP+L+ I++DE HER+M++D
Sbjct: 122 --DTVGYVVRFLESMSSCT-KIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDM 178
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFF---GGAPI---LHIPGFTYPVQEYYLE 246
+L +LK + KR LKLI+ SAT++A FS+FF G + L I G +PV +YL
Sbjct: 179 ILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLN 238
Query: 247 D 247
+
Sbjct: 239 E 239
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 297 (109.6 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 78/209 (37%), Positives = 127/209 (60%)
Query: 59 INKCL--TLSPILSPS--IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRIS 114
IN+C +S I S S II+ +TG GK+TQ+PQ+ILD + R+ + C I+VTQPR+I
Sbjct: 141 INRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYILDRSVQRS--TYCNIVVTQPRKIG 198
Query: 115 AIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSG 174
A +IA +++ER G VGYQ+ LEK + + ++Y T G+L + + S L
Sbjct: 199 ASSIARWISKER---AWTLGGLVGYQVGLEK-IATEDTKLIYMTTGVLLQKIVSAKSLME 254
Query: 175 VSHIVMDEIHERSMISDFLLAILKDV--TDKRKDLKLILMSATLNAEKFSQFFG------ 226
+HI +DE+HER+ DFLL +++ + T+ R +K++LMSAT++ ++F+ +F
Sbjct: 255 FTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRF-VKVVLMSATISCKEFADYFAVPVQNE 313
Query: 227 --GAPILHIPGFTYPVQEYYLEDVLNMTR 253
A + + G Y V+E YL+D+ ++ R
Sbjct: 314 LNPACVYEVEGEPYAVEECYLDDLEHLHR 342
Score = 99 (39.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GK+TQ+PQ+ILD + R+ + C I+VTQPR+I A ++
Sbjct: 165 GSGKSTQLPQYILDRSVQRS--TYCNIVVTQPRKIGASSI 202
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFG--------GAPILHIPGFTYPVQEYYLEDVLN 299
+L + +K++LMSAT++ ++F+ +F A + + G Y V+E YL+D+ +
Sbjct: 280 LLRTNSRFVKVVLMSATISCKEFADYFAVPVQNELNPACVYEVEGEPYAVEECYLDDLEH 339
Query: 300 MTR 302
+ R
Sbjct: 340 LHR 342
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 295 (108.9 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 71/186 (38%), Positives = 116/186 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II+ +TG GK+TQ+PQ+ILD + R+ + C I+VTQPR+I A +IA +++ER
Sbjct: 152 IIHGATGSGKSTQLPQYILDHYVQRS--AYCSIVVTQPRKIGASSIARWISKER---AWT 206
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGYQ+ LEK + + ++Y T G+L + + S L +HI++DE+HER+ DF
Sbjct: 207 LGGVVGYQVGLEK-IATEDTRLIYMTTGVLLQKIVSAKSLMEFTHIIIDEVHERTEEMDF 265
Query: 193 LLAILKDV--TDKRKDLKLILMSATLNAEKFSQFFG--------GAPILHIPGFTYPVQE 242
LL +++ + T+ R +K++LMSAT++ ++F+ +F A I + G + V+E
Sbjct: 266 LLLVVRKLLRTNSRF-VKVVLMSATISCKEFADYFAVPVQNKMNPAYIFEVEGKPHSVEE 324
Query: 243 YYLEDV 248
YYL D+
Sbjct: 325 YYLNDL 330
Score = 100 (40.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GK+TQ+PQ+ILD + R+ + C I+VTQPR+I A ++
Sbjct: 158 GSGKSTQLPQYILDHYVQRS--AYCSIVVTQPRKIGASSI 195
Score = 76 (31.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFG--------GAPILHIPGFTYPVQEYYLEDV 297
+L + +K++LMSAT++ ++F+ +F A I + G + V+EYYL D+
Sbjct: 273 LLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNPAYIFEVEGKPHSVEEYYLNDL 330
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 294 (108.6 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 76/204 (37%), Positives = 123/204 (60%)
Query: 59 INKCL--TLSPILSPS--IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRIS 114
IN+C +S I S S II+ +TG GK+TQ+PQ++LD R+ + C I+VTQPR+I
Sbjct: 136 INRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRS--AFCNIVVTQPRKIG 193
Query: 115 AIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSG 174
A +IA +++ER G VGYQ+ LEK + + ++Y T G+L + + S L
Sbjct: 194 ASSIARWISKERSWTLG---GLVGYQVGLEK-IATEDTRLIYMTTGVLLQKIVSAKSLME 249
Query: 175 VSHIVMDEIHERSMISDFLLAILKDV--TDKRKDLKLILMSATLNAEKFSQFFG------ 226
+HI +DE+HER+ DFLL +++ + T+ R +K++LMSAT+N ++F+ +F
Sbjct: 250 FTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRF-VKVVLMSATINCKQFADYFAVPVQNK 308
Query: 227 --GAPILHIPGFTYPVQEYYLEDV 248
A + + G + ++EYYL D+
Sbjct: 309 MNPAYVFEVEGKPHAIEEYYLNDL 332
Score = 92 (37.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GK+TQ+PQ++LD R+ + C I+VTQPR+I A ++
Sbjct: 160 GSGKSTQLPQYVLDHYTQRS--AFCNIVVTQPRKIGASSI 197
Score = 79 (32.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFG--------GAPILHIPGFTYPVQEYYLEDV 297
+L + +K++LMSAT+N ++F+ +F A + + G + ++EYYL D+
Sbjct: 275 LLRTNSRFVKVVLMSATINCKQFADYFAVPVQNKMNPAYVFEVEGKPHAIEEYYLNDL 332
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 292 (107.8 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 70/175 (40%), Positives = 102/175 (58%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ TGCGK+TQVPQ++ D R C TQPRR++ +++ +RVA E + G
Sbjct: 166 IVAGDTGCGKSTQVPQYLYDFGY---RSIAC----TQPRRLACVSLCKRVAHELLDDYG- 217
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
S V +QIR E+ K +IL+ T G+L + L +++DEIHER++ DF
Sbjct: 218 --SRVAFQIRFERSRT-KLTNILFITEGLLLRQLAVAANLDQYDALILDEIHERNLFGDF 274
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG--GAPILHIPGFTYPVQEYYL 245
LL + K + R LKLILMSAT+N E F +FG GA ++ +PG +P++ YL
Sbjct: 275 LLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVPGRLFPIKLRYL 329
Score = 104 (41.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 253 RKDLKLILMSATLNAEKFSQFFG--GAPILHIPGFTYPVQEYYL 294
R LKLILMSAT+N E F +FG GA ++ +PG +P++ YL
Sbjct: 286 RPQLKLILMSATINVELFHGYFGEEGARLVQVPGRLFPIKLRYL 329
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
GCGK+TQVPQ++ D R C TQPRR++ ++L +
Sbjct: 172 GCGKSTQVPQYLYDFGY---RSIAC----TQPRRLACVSLCKR 207
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 291 (107.5 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 73/172 (42%), Positives = 103/172 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GKTTQV Q++ + +G C TQPRR++A+++A+RVA+E C R
Sbjct: 535 VVIGETGSGKTTQVTQYLAEAGYT-TKGKIGC---TQPRRVAAMSVAKRVAEEFG--C-R 587
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G VGY IR E + I Y T G+L + D LS S I++DE HER++ +D
Sbjct: 588 LGEEVGYAIRFE-DCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDV 646
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
L +LK + +R DL+LI+ SATL+AEKFS +F I IPG T+PV+ Y
Sbjct: 647 LFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILY 698
Score = 107 (42.7 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R DL+LI+ SATL+AEKFS +F I IPG T+PV+ Y
Sbjct: 658 RLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILY 698
Score = 68 (29.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQV Q++ + +G C TQPRR++A+++ +
Sbjct: 541 GSGKTTQVTQYLAEAGYT-TKGKIGC---TQPRRVAAMSVAKR 579
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 292 (107.8 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 74/169 (43%), Positives = 106/169 (62%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
I+ +TG GK+TQVPQ ILDD I + RG++ I+ QPRR +A+ +A+RVA ER E R
Sbjct: 605 IVIGATGSGKSTQVPQIILDDAIKQGRGADTRILCLQPRRAAAMWVAQRVASERGE---R 661
Query: 133 PGSSVGYQIRLEKELP-RKRGSILYCTAGILPEVMQS--DPILSGVSHIVMDEIHERSMI 189
G SVG++IR + L R+ G++ + T GIL + +Q L SHIV+DE+HERS+
Sbjct: 662 LGESVGFRIRFDARLANRQGGTVSFVTLGILLKQLQDGVQETLDMYSHIVIDEVHERSLE 721
Query: 190 SDFLLAILKDVTDKR----KDL-KLILMSATL-NAEKFSQFFGGAPILH 232
D LL +LK +R + L K+ILMSA++ N E+ ++ A LH
Sbjct: 722 LDLLLVVLKKAIAERLAKGQSLPKIILMSASISNQEQLQEYL--ADSLH 768
Score = 107 (42.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAI 56
G GK+TQVPQ ILDD I + RG++ I+ QPRR +A+
Sbjct: 611 GSGKSTQVPQIILDDAIKQGRGADTRILCLQPRRAAAM 648
Score = 71 (30.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 208 KLILMSATL-NAEKFSQFF------GGA---------PILHIPGFTYPVQEYYLEDVLNM 251
K+ILMSA++ N E+ ++ G A PIL IPG T+PV YL+ +L M
Sbjct: 745 KIILMSASISNQEQLQEYLADSLHDGKARRLPAHQACPILSIPGRTFPVSSIYLDRLLPM 804
Query: 252 TR 253
R
Sbjct: 805 IR 806
Score = 71 (30.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 257 KLILMSATL-NAEKFSQFF------GGA---------PILHIPGFTYPVQEYYLEDVLNM 300
K+ILMSA++ N E+ ++ G A PIL IPG T+PV YL+ +L M
Sbjct: 745 KIILMSASISNQEQLQEYLADSLHDGKARRLPAHQACPILSIPGRTFPVSSIYLDRLLPM 804
Query: 301 TR 302
R
Sbjct: 805 IR 806
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 287 (106.1 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 88/248 (35%), Positives = 125/248 (50%)
Query: 47 VTQPRRISAIALINKCLTLSPILSPSIIYTS-TGCGKTTQVPQFILDDEIARNRGSECCI 105
+ + RR IA + K L + +I TG GKTTQ+PQF+ + R G I
Sbjct: 34 IAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCRE-GK--MI 90
Query: 106 MVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEV 165
+TQPRRI+A+ +A+RVA+E + Q G+ VGY IR + + + Y T G+L
Sbjct: 91 GITQPRRIAAVTVAKRVAEECEVQLGQ---KVGYSIRFD-DTTSGSTRLKYMTDGLLLRE 146
Query: 166 MQSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF 225
DP LS S I++DE H+RS+ +D LLA+LK + R + T SQ
Sbjct: 147 ALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQP---VSEKTEFGNVASQV- 202
Query: 226 GGAPILHIPGFTYPVQEYYLEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGF 285
G P Q L+ LKLI+MSA+L+A FS++FGGA +H+ G
Sbjct: 203 -QTTTRDANG---PQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGR 258
Query: 286 TYPVQEYY 293
+PV Y
Sbjct: 259 QFPVDILY 266
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 253 (94.1 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 61/147 (41%), Positives = 87/147 (59%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSEC--CIMVTQPRRISAIAIAERVAQERDEQC 130
II TG GKTTQVPQF+ + + I VTQPRR++A++ A+RVA+E + +
Sbjct: 425 IICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGVTQPRRVAAVSTAKRVAEELNVEF 484
Query: 131 GRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMIS 190
G+ VGYQIR +K+L I + T GIL +Q+D +LS S I++DE HER++ +
Sbjct: 485 GK---EVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDFLLSQYSSILIDEAHERNLNT 541
Query: 191 DFLLAILKDVTDKRKDLKLILMSATLN 217
D L+ +L + RK KL L S N
Sbjct: 542 DILIGLLSRIVPLRK--KLYLKSLATN 566
Score = 68 (29.0 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 207 LKLILMSATLNAEKFSQ----FFGGAPILHIPGFTYPVQEYY 244
LKL++MSATL E F++ F P+++IP +PV ++
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHF 621
Score = 68 (29.0 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 256 LKLILMSATLNAEKFSQ----FFGGAPILHIPGFTYPVQEYY 293
LKL++MSATL E F++ F P+++IP +PV ++
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHF 621
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 291 (107.5 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 75/204 (36%), Positives = 123/204 (60%)
Query: 59 INKCL--TLSPILSPS--IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRIS 114
I++C +S I S S II+ +TG GK+TQ+PQ++LD + R+ + C I+VTQPR+I
Sbjct: 140 ISRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYLQRS--AYCNIVVTQPRKIG 197
Query: 115 AIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSG 174
A +IA +++ER G VGYQ+ LEK + + ++Y T G+L + + S L
Sbjct: 198 ASSIARWISRERGWVLG---GLVGYQVGLEK-IATEDTKLIYMTTGVLLQKIVSAKSLVE 253
Query: 175 VSHIVMDEIHERSMISDFLLAILKDV--TDKRKDLKLILMSATLNAEKFSQFFG------ 226
+H+ +DE+HER+ DFLL +++ + T+ R +K++LMSAT+N +F+ +F
Sbjct: 254 FTHVFIDEVHERTEEMDFLLLVVRKLLRTNSRF-VKVVLMSATINCREFADYFAVPVQNK 312
Query: 227 --GAPILHIPGFTYPVQEYYLEDV 248
A I + G + ++EYYL D+
Sbjct: 313 MSPAYIFEVEGKPFSIEEYYLNDL 336
Score = 96 (38.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GK+TQ+PQ++LD + R+ + C I+VTQPR+I A ++
Sbjct: 164 GSGKSTQLPQYVLDHYLQRS--AYCNIVVTQPRKIGASSI 201
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFG--------GAPILHIPGFTYPVQEYYLEDV 297
+L + +K++LMSAT+N +F+ +F A I + G + ++EYYL D+
Sbjct: 279 LLRTNSRFVKVVLMSATINCREFADYFAVPVQNKMSPAYIFEVEGKPFSIEEYYLNDL 336
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 285 (105.4 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 77/191 (40%), Positives = 109/191 (57%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
+++ TG GKTTQ+PQF+ E A I VTQPRRI+A +A RVA+E + G
Sbjct: 40 TVVVGQTGSGKTTQIPQFL---EKAGWCSDGKLIGVTQPRRIAATTVALRVAEEYGSEVG 96
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ VGY IR E ++ + I + T G+L DP+LS S +++DE HERS+ +D
Sbjct: 97 K---EVGYSIRFE-DVTSEATRIKFLTDGLLIREALVDPLLSRYSIVMVDEAHERSVSTD 152
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFF----GGA------P------ILHIPG 235
LL +LK + KR +L++I+ SATL AE+F FF GG+ P I+ + G
Sbjct: 153 ILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGSRQDREEPQGTIGTIVSLEG 212
Query: 236 FTYPVQEYYLE 246
TYP+ YLE
Sbjct: 213 RTYPIDILYLE 223
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 284 (105.0 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 68/168 (40%), Positives = 102/168 (60%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ + TG GKTTQ+P IL E N G I VTQPRRI+ ++++E +A++ +
Sbjct: 27 VVESPTGSGKTTQLP-LILH-EAGYNEGG--AIGVTQPRRIAVLSVSEFIAKQVLHV--Q 80
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
PG VGY++R E + I T GIL + M+ DP+LS S I++DE HERS+ DF
Sbjct: 81 PGI-VGYKMRFEDHTDVET-KIKVMTDGILLQEMKLDPLLSKYSIIMVDEAHERSLNIDF 138
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 240
+L +LK V +R D ++++ SAT+N FS++F P++ I YPV
Sbjct: 139 ILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAYPV 186
Score = 88 (36.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 245 LEDVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
L+ VL R D ++++ SAT+N FS++F P++ I YPV
Sbjct: 143 LKRVLQQ-RHDFRIVISSATINTAMFSRYFNECPVIKIDAVAYPV 186
Score = 74 (31.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 15 EDLAGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
E G GKTTQ+P IL E N G I VTQPRRI+ +++
Sbjct: 29 ESPTGSGKTTQLP-LILH-EAGYNEGG--AIGVTQPRRIAVLSV 68
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 284 (105.0 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 79/204 (38%), Positives = 109/204 (53%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
+I+ TG GKTTQ+PQ+ LD G I VTQPRR++A +A RVA+E +C
Sbjct: 41 TIVVGQTGSGKTTQLPQY-LDQAGWCTEGK--AIAVTQPRRVAATTVAARVAEEM--RC- 94
Query: 132 RPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ G VGY IR E I + T G+L DP+LS S I++DE HERS+ +D
Sbjct: 95 KLGEDVGYSIRFEDRTSAMT-RIKFLTDGMLLREALVDPLLSRYSVIMVDEAHERSLSTD 153
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGG-----AP----------ILHIPGF 236
LL ILK + +R +L++I+ SATL AE F ++F G P I+ I G
Sbjct: 154 ILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQGPNGEVGGNTGKIISIEGR 213
Query: 237 TYPVQEYYLEDVL-NMTRKDLKLI 259
YPV +LE N + +K +
Sbjct: 214 MYPVDTLFLESAAENYVERSVKTV 237
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 289 (106.8 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 71/177 (40%), Positives = 103/177 (58%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
II TG GKTTQ+P+ L+ RG + I TQPRRI+A +A R+A+E + G
Sbjct: 119 IIAGETGSGKTTQIPKICLE----LGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGE 174
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
VGY++R ++ ++ I T GIL MQ D +L I++DE HERS+ DF
Sbjct: 175 ---QVGYKVRFNDQVS-EQSYIKLMTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDF 230
Query: 193 LLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGG-----APILHIPGFTYPVQEYY 244
+L LK + KR DLKLI+ SAT++ ++F++ F API+ + G T+PV+ Y
Sbjct: 231 ILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRY 287
Score = 99 (39.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 244 YLEDVLNMTRKDLKLILMSATLNAEKFSQFFGG-----APILHIPGFTYPVQEYY 293
YL+ +L + R DLKLI+ SAT++ ++F++ F API+ + G T+PV+ Y
Sbjct: 234 YLKQIL-IKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRY 287
Score = 76 (31.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GKTTQ+P+ L+ RG + I TQPRRI+A + N+
Sbjct: 125 GSGKTTQIPKICLE----LGRGVDGLIGHTQPRRIAARTVANR 163
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 289 (106.8 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 75/204 (36%), Positives = 121/204 (59%)
Query: 59 INKCL--TLSPILSPS--IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRIS 114
IN+C +S I S S II+ +TG GK+TQ+PQ++LD R+ + C I+VTQPR+I
Sbjct: 136 INRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRS--AFCNIVVTQPRKIG 193
Query: 115 AIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSG 174
A +IA +++ER G VGYQ+ LEK ++Y T G+L + + S L
Sbjct: 194 ASSIARWISKERSWTLG---GLVGYQVGLEKTATEDT-RLIYMTTGVLLQKIVSAKSLME 249
Query: 175 VSHIVMDEIHERSMISDFLLAILKDV--TDKRKDLKLILMSATLNAEKFSQFFG------ 226
+H+ +DE+HER+ DFLL +++ + T+ R +K+ILMSAT+N ++F+ +F
Sbjct: 250 FTHVFIDEVHERTEEMDFLLLVVRKLLRTNSRF-VKVILMSATINCKQFADYFAVPVQNK 308
Query: 227 --GAPILHIPGFTYPVQEYYLEDV 248
A + + G + +++YYL D+
Sbjct: 309 MNPAYVFEVEGKPHTIEQYYLNDL 332
Score = 92 (37.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAL 58
G GK+TQ+PQ++LD R+ + C I+VTQPR+I A ++
Sbjct: 160 GSGKSTQLPQYVLDHYTQRS--AFCNIVVTQPRKIGASSI 197
Score = 77 (32.2 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 248 VLNMTRKDLKLILMSATLNAEKFSQFFG--------GAPILHIPGFTYPVQEYYLEDV 297
+L + +K+ILMSAT+N ++F+ +F A + + G + +++YYL D+
Sbjct: 275 LLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMNPAYVFEVEGKPHTIEQYYLNDL 332
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 280 (103.6 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 73/218 (33%), Positives = 125/218 (57%)
Query: 70 SPSIIYTS-TGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDE 128
+P ++ ++ TG GK+T +P +L + G I++ +PRR++A +A+R+A+ +E
Sbjct: 20 APQVLLSAPTGAGKSTWLPLQLL-----AHPGINGKIILLEPRRLAARNVAQRLAELLNE 74
Query: 129 QCGRPGSSVGYQIRLEKEL-PRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERS 187
+PG +VGY++R + + P R ++ T G+L ++Q DP LSGV +++DE HERS
Sbjct: 75 ---KPGDTVGYRMRAQNCVGPNTRLEVV--TEGVLTRMIQRDPELSGVGLVILDEFHERS 129
Query: 188 MISDFLLAILKDVTDK-RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLE 246
+ +D LA+L DV R DLKL++MSATL+ ++ Q AP++ G ++PV+ YL
Sbjct: 130 LQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLP 189
Query: 247 DVLNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPG 284
+ D + + L E G+ +L +PG
Sbjct: 190 LPAHQRFDDAVAVATAEMLRQES------GSLLLFLPG 221
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 276 (102.2 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 67/180 (37%), Positives = 108/180 (60%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
+I + TG GKTTQ+PQF+L A+N G I +TQPRR++AI +A RVAQE + G
Sbjct: 88 LIMSETGSGKTTQIPQFLLLAGYAKN-GM---IGITQPRRVAAITVARRVAQELN---GT 140
Query: 133 PGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISDF 192
G +VGY +R E ++ + I + T G+L D +L S I++DE HER++ +D
Sbjct: 141 IGDTVGYTVRFE-DVTSRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADL 199
Query: 193 LLAILKDVTDKRK-----DLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLED 247
L I+KD +R+ +LK+++ SAT++ + F +F +++ G TYPV+ + ++
Sbjct: 200 LFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFN-CKGMYLEGRTYPVRVMHTKE 258
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 274 (101.5 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 63/145 (43%), Positives = 93/145 (64%)
Query: 105 IMVTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPE 164
I VTQPR+++AI++A+RVA+E +C GS VGYQ+R + + K +I Y T G L +
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEM--KCTL-GSKVGYQVRFD-DCSSKETAIKYMTDGCLLK 57
Query: 165 VMQSDPILSGVSHIVMDEIHERSMISDFLLAILKDV----TDKRKD-LKLILMSATLNAE 219
+ DP L+ S I++DE HER++ +D L +LK + + RK+ LK+++MSAT+
Sbjct: 58 HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELA 117
Query: 220 KFSQFFGGAPILHIPGFTYPVQEYY 244
K S FFG PI IPG YPV+E +
Sbjct: 118 KLSAFFGNCPIFDIPGRLYPVREKF 142
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 254 (94.5 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 65/176 (36%), Positives = 101/176 (57%)
Query: 73 IIYTSTGCGKTTQVPQFILDDE--------IARNRGSEC------CIMVTQPRRISAIAI 118
++ TG GK+TQ+PQF++D+ I + GS+ CI +TQPRR++AI++
Sbjct: 167 LLIGETGSGKSTQIPQFLVDESWCRPTKTTIVQENGSKKEAVVGGCIAITQPRRVAAISL 226
Query: 119 AERVAQERDEQCGR--PGSSVGYQIRLEKEL-PRKRGSILYCTAGILPEVMQSDPILSGV 175
A RVA+E G P S VGY +R + + P R + + T G+L + M DP L+
Sbjct: 227 ARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPSTR--VKFLTEGMLLQEMLHDPWLTKY 284
Query: 176 SHIVMDEIHERSMISDFLLAILKD-VTDKRKD-----LKLILMSATLNAEKFSQFF 225
S IV+DE+HER + D ++ L++ V+ KR+ LK ++MSAT + E +FF
Sbjct: 285 SAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGGVPLKAVVMSATADMESLQEFF 340
Score = 43 (20.2 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 227 GAPILHIPGFTYPVQEYYL-EDVLNMTRKDLKLI 259
G + HI G +PV+ Y E V + LK+I
Sbjct: 359 GIAVCHIKGRQFPVKTIYSPEPVHDFVDAALKVI 392
Score = 39 (18.8 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 276 GAPILHIPGFTYPVQEYY 293
G + HI G +PV+ Y
Sbjct: 359 GIAVCHIKGRQFPVKTIY 376
>TIGR_CMR|SPO_0972 [details] [associations]
symbol:SPO_0972 "ATP-dependent helicase HrpB"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
RefSeq:YP_166224.1 ProteinModelPortal:Q5LUT1 GeneID:3192888
KEGG:sil:SPO0972 PATRIC:23375231 HOGENOM:HOG000244610
ProtClustDB:CLSK933398 Uniprot:Q5LUT1
Length = 816
Score = 271 (100.5 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 75/216 (34%), Positives = 120/216 (55%)
Query: 72 SIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCG 131
+++ G GKTT+VP +L + R I++ +PRR++A A AER+A E G
Sbjct: 23 AVLQAPPGAGKTTRVPLALLSAGLTNGR-----IVMLEPRRLAARAAAERMA----ETLG 73
Query: 132 RP-GSSVGYQIRLE-KELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMI 189
P G +VGY+IR E K R ++ T GIL ++Q++P L G+ ++ DE HERS+
Sbjct: 74 EPVGQTVGYRIRGEAKRTNATRIEVV--TEGILTRMLQAEPDLPGIGAVIFDEFHERSLN 131
Query: 190 SDFLLAILKDVTDK-RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYYLEDV 248
+D LA+ +VT+ R DL L+ MSATL+A + AP++ G YPV+ +L+
Sbjct: 132 ADLGLALCLEVTEALRDDLILLAMSATLDAGPVAALMD-APMVTSQGRAYPVETRWLDHP 190
Query: 249 LNMTRKDLKLILMSATLNAEKFSQFFGGAPILHIPG 284
L + ++ L AE ++ GG+ ++ +PG
Sbjct: 191 LGPRARRVEA-LADLVAKAEAETRDLGGSLLVFLPG 225
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 270 (100.1 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 67/190 (35%), Positives = 105/190 (55%)
Query: 52 RISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPR 111
R+ +I LT + +++ G GKTT+VP +LD + I++ +PR
Sbjct: 3 RLPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGKR----IIMLEPR 58
Query: 112 RISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPI 171
R++A A +A+ E+ G ++VGY IR ++ + R + T GIL +QSDP+
Sbjct: 59 RLAATNAARWMARSLGEEAG---ATVGYAIRFDRRVSA-RTRVEVVTEGILTRRLQSDPL 114
Query: 172 LSGVSHIVMDEIHERSMISDFLLAILKDV-TDKRKDLKLILMSATLNAEKFSQFFGGAPI 230
L GV ++ DE HERS+ SD LA+ +DV R+DL++I+MSAT+ A + G AP+
Sbjct: 115 LEGVGAVIFDEFHERSIHSDLALALCRDVQAGLREDLRIIVMSATMAAAPVAALLGDAPV 174
Query: 231 LHIPGFTYPV 240
+ G YPV
Sbjct: 175 ITSEGRNYPV 184
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 57/125 (45%), Positives = 78/125 (62%)
Query: 116 IAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGV 175
+++A+RV++E G G VGY IR E + + I Y T GIL + L
Sbjct: 1 MSVAKRVSEEMG---GNLGEEVGYAIRFE-DCTSESTLIKYMTDGILLRESLREADLDHY 56
Query: 176 SHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPG 235
S I+MDE HERS+ +D L +L++V +R DLKLI+ SAT++AEKF+ FFG PI HIPG
Sbjct: 57 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPG 116
Query: 236 FTYPV 240
T+PV
Sbjct: 117 RTFPV 121
Score = 135 (52.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPV 289
R DLKLI+ SAT++AEKF+ FFG PI HIPG T+PV
Sbjct: 85 RSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPV 121
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 268 (99.4 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 63/173 (36%), Positives = 101/173 (58%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GK+TQ+ QF+ D +A + C TQPR+I+A+ +A+RV +E C
Sbjct: 326 VLIGETGSGKSTQLVQFLADSGVAASESIVC----TQPRKIAAMTLADRVREE-SSGCYE 380
Query: 133 PGS-SVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ S +E+ K ++Y T L + D LSG+S +++DE HERS+ +D
Sbjct: 381 ENTVSCTPTFSSTEEISSK---VVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTD 437
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LLA+LK + +R DL+L++MSAT +A++ SQ+F IL + G +PV+ Y
Sbjct: 438 LLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVY 490
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 61/150 (40%), Positives = 88/150 (58%)
Query: 107 VTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVM 166
VTQPRR++A+ +A RVA+ER G VGY IR + + I + T G+L M
Sbjct: 70 VTQPRRVAAVTVAGRVAEERGAVLGH---EVGYCIRFDDCTDQLATRIKFLTDGMLVREM 126
Query: 167 QSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG 226
DP+L+ S I++DE HER++ +D + +LK + KR DL+LI+ SATL+A+KF FF
Sbjct: 127 MVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFN 186
Query: 227 ----GAP------ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 187 QNETSDPARDTCVILTVEGRTFPVDIFYLQ 216
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 264 (98.0 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 61/173 (35%), Positives = 99/173 (57%)
Query: 73 IIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIAIAERVAQERDEQCGR 132
++ TG GK+TQ+ QF+ D +A + C TQPR+I+A+ + +RV +E C
Sbjct: 323 VLIGETGSGKSTQLVQFLADSGVAASESIVC----TQPRKIAAMTLTDRVREE-SSGCYE 377
Query: 133 PGS-SVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSHIVMDEIHERSMISD 191
+ S +E+ K ++Y T L + D LSG+S +++DE HERS+ +D
Sbjct: 378 ENTVSCTPTFSSTEEISSK---VVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTD 434
Query: 192 FLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 244
LLA+L+ + +R DL+L++MSAT +A + SQ+ ILH+ G +PV+ Y
Sbjct: 435 LLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVY 487
Score = 91 (37.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 253 RKDLKLILMSATLNAEKFSQFFGGAPILHIPGFTYPVQEYY 293
R DL+L++MSAT +A + SQ+ ILH+ G +PV+ Y
Sbjct: 447 RIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVY 487
Score = 79 (32.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 19 GCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIALINK 61
G GK+TQ+ QF+ D +A + C TQPR+I+A+ L ++
Sbjct: 329 GSGKSTQLVQFLADSGVAASESIVC----TQPRKIAAMTLTDR 367
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 261 (96.9 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 69/195 (35%), Positives = 110/195 (56%)
Query: 58 LINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRRISAIA 117
+I + + +PI+ +I TG GKTTQVPQF+ + + G I +T+PRR++A++
Sbjct: 250 VIMEAINENPIV---VICGETGSGKTTQVPQFLYEAGYTSSNG---IIGITEPRRVAAVS 303
Query: 118 IAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPILSGVSH 177
+++RVA+E + V YQIR E + I + T G+L + +Q D +LS
Sbjct: 304 MSQRVAKEMNLS----HRVVSYQIRYEGNTTDET-QIKFMTDGVLLKEVQKDFLLSKYKV 358
Query: 178 IVMDEIHERSMISDFLLAILKDVTDKRKD----LKLILMSATLNAEKFSQ----FFGGAP 229
I++DE HERSM +D L+ +L + R+ LKLI+MSATL E F++ F G P
Sbjct: 359 IIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRLFAGTPP 418
Query: 230 ILHIPGFTYPVQEYY 244
+L + +PV ++
Sbjct: 419 VLQVDARQFPVTVHF 433
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 252 (93.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 61/150 (40%), Positives = 88/150 (58%)
Query: 107 VTQPRRISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVM 166
VTQPRR++A+ +A RVA+ER G VGY IR + + I + T G+L M
Sbjct: 74 VTQPRRVAAVTVAGRVAEERGAVLGH---EVGYCIRFDDCTDQLATRIKFLTDGMLVREM 130
Query: 167 QSDPILSGVSHIVMDEIHERSMISDFLLAILKDVTDKRKDLKLILMSATLNAEKFSQFFG 226
DP+L+ S I++DE HER++ +D + +LK + KR DL+LI+ SATL+A+KF FF
Sbjct: 131 MVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFN 190
Query: 227 ----GAP------ILHIPGFTYPVQEYYLE 246
P IL + G T+PV +YL+
Sbjct: 191 QNETSDPARDTCVILTVEGRTFPVDIFYLQ 220
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 242 (90.2 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 68/200 (34%), Positives = 110/200 (55%)
Query: 53 ISAIALINKCLTLSPILSPSIIYTSTGCGKTTQVPQFILDDEIARNRGSECCIMVTQPRR 112
+S +I + + PI+ I+ TG GKTTQVPQF+ + A + I VT+PRR
Sbjct: 42 LSEEQVIMEAVAEHPIV---IVCGETGSGKTTQVPQFLYE---AGFSSEDSIIGVTEPRR 95
Query: 113 ISAIAIAERVAQERDEQCGRPGSSVGYQIRLEKELPRKRGSILYCTAGILPEVMQSDPIL 172
++A+A+++RVA+E + V YQIR E + + I + T G+L + +Q D +L
Sbjct: 96 VAAVAMSQRVAKEMNLS----QRVVSYQIRYEGNVTEET-RIKFMTDGVLLKEIQKDFLL 150
Query: 173 SGVSHIVMDEIHERSMISDFLLAILKDVTD---KRK-DLKLILMSATLNAEKFSQ----F 224
+++DE HERS+ +D L+ +L + KR LKL++MSATL E F+Q F
Sbjct: 151 LRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLF 210
Query: 225 FGGAPILHIPGFTYPVQEYY 244
P++ + +PV ++
Sbjct: 211 AKPPPVIKVESRQFPVTVHF 230
Score = 38 (18.4 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 251 MTRKDLK-LILMSATLNAEKFSQF 273
+TR+ ++ LIL LN EK F
Sbjct: 487 ITRRPVEDLILQMKALNVEKVINF 510
WARNING: HSPs involving 46 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 319 319 0.00084 116 3 11 22 0.50 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 296
No. of states in DFA: 567 (60 KB)
Total size of DFA: 186 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.53u 0.11s 27.64t Elapsed: 00:00:02
Total cpu time: 27.57u 0.11s 27.68t Elapsed: 00:00:02
Start: Thu Aug 15 12:27:23 2013 End: Thu Aug 15 12:27:25 2013
WARNINGS ISSUED: 2