RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4960
(341 letters)
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 153 bits (387), Expect = 6e-46
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Query: 127 PKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDHG 186
P DWR + V+ QG CGSCWAF+ T +E Q L + TL LS+ +L++CD
Sbjct: 2 PPEWDWR--SKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM 59
Query: 187 NLNCNGGNIDVAFEYVKQYGLESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTSGVD 246
+ C GG A+ +K G D + + + EK K + +
Sbjct: 60 DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQK 119
Query: 247 HMMHLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGILTWIV 306
L + GPI V +N ++ Y R C+P +DHAV +VGYG+++ + W +
Sbjct: 120 LAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVPFWAI 179
Query: 307 RNSWGDIGPDHGYFQIERGANACGIESYAYLASV 340
+NSWG + GY+ + RG+ ACG+ + A A V
Sbjct: 180 KNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 142 bits (357), Expect = 2e-41
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 4/212 (1%)
Query: 127 PKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDHG 186
P S+D+R K + PV++QG+CGSCWAF++ LE Q+ L LS LV+C
Sbjct: 2 PDSVDYR--KKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE 59
Query: 187 NLNCNGGNIDVAFEYVKQYG-LESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTSGV 245
N C GG + AF+YV++ ++S+ YPY +E K ++ +
Sbjct: 60 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEK 119
Query: 246 DHMMHLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGILTWI 305
+ + GP+ V ++ L + D +CN L+HAV VGYG + G WI
Sbjct: 120 ALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWI 179
Query: 306 VRNSWGDIGPDHGYFQIERGA-NACGIESYAY 336
++NSWG+ + GY + R NACGI + A
Sbjct: 180 IKNSWGENWGNKGYILMARNKNNACGIANLAS 211
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 141 bits (355), Expect = 6e-41
Identities = 74/215 (34%), Positives = 107/215 (49%), Gaps = 5/215 (2%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDH 185
P S+DWR+ K ++PV++QG CGSCW F+TT LES VA+ + L++ QLV+C
Sbjct: 9 YPPSMDWRK-KGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQ 67
Query: 186 G--NLNCNGGNIDVAFEYVKQ-YGLESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVT 242
N C GG AFEY++ G+ + YPY+ +++ + V + +
Sbjct: 68 NFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMN 127
Query: 243 SGVDHMMHLLQSGPIGVYLN-HRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGI 301
+ + P+ Y P K++HAV VGYGE+NGI
Sbjct: 128 DEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGI 187
Query: 302 LTWIVRNSWGDIGPDHGYFQIERGANACGIESYAY 336
WIV+NSWG +GYF IERG N CG+ + A
Sbjct: 188 PYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACAS 222
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 138 bits (349), Expect = 2e-40
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 8/215 (3%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDH 185
LP S+DWR + + PV++QG CGSCWAF+T A +E ++ L LS+ QLV+C
Sbjct: 1 LPDSIDWR--ENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTT 58
Query: 186 GNLNCNGGNIDVAFEYVKQYGLESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTSGV 245
N C GG ++ AF+++ G + + ++ T + + +
Sbjct: 59 ANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNE 118
Query: 246 DHMMHLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGILTWI 305
+ + + P V + +HA+ +VGYG +N WI
Sbjct: 119 QSLQKAVANQP--VSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDFWI 176
Query: 306 VRNSWGDIGPDHGYFQIERG----ANACGIESYAY 336
V+NSWG + GY + ER CGI +A
Sbjct: 177 VKNSWGKNWGESGYIRAERNIENPDGKCGITRFAS 211
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 138 bits (348), Expect = 4e-40
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVE--- 182
LP S+DWR + + V+ QG CG+CWAF+ LE+Q+ L L LS LV+
Sbjct: 1 LPDSVDWR--EKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCST 58
Query: 183 CDHGNLNCNGGNIDVAFE-YVKQYGLESQADYPYRNKENITFRCTYEKEKAKVFVQDTWV 241
+GN CNGG + AF+ + G++S A YPY+ + + + +
Sbjct: 59 EKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPY 118
Query: 242 TSGVDHMMHLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGI 301
+ GP+ V ++ R + + +C + ++H V +VGYG+ NG
Sbjct: 119 GREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQN-VNHGVLVVGYGDLNGK 177
Query: 302 LTWIVRNSWGDIGPDHGYFQIERG-ANACGIESYAY 336
W+V+NSWG + GY ++ R N CGI S+
Sbjct: 178 EYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPS 213
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 139 bits (351), Expect = 5e-40
Identities = 58/249 (23%), Positives = 93/249 (37%), Gaps = 40/249 (16%)
Query: 126 LPKSLDWRQ--SKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTL--YPLSKSQLV 181
LP S D R+ + + + QG CGSCWAF + ++ + +S L+
Sbjct: 2 LPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLL 61
Query: 182 EC--DHGNLNCNGGNIDVAFEYVKQYGLESQADYPY-------------RNKENITFRCT 226
C CNGG A+ + + GL S Y + CT
Sbjct: 62 TCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCT 121
Query: 227 -------------------YEKEKAKVFVQDTWVTSGVDHMMHLLQSGPIGVYLNHRLIE 267
Y+++K + + S D M + ++GP+ + +
Sbjct: 122 GEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFS--VYS 179
Query: 268 SYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGILTWIVRNSWGDIGPDHGYFQIERGAN 327
+ HA+ I+G+G +NG W+V NSW D+G+F+I RG +
Sbjct: 180 DFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQD 239
Query: 328 ACGIESYAY 336
CGIES
Sbjct: 240 HCGIESEVV 248
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 137 bits (344), Expect = 1e-39
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDH 185
LP+ +DWR K + PV++QG CGSCWAF+T + +ES + L LS+ +LV+CD
Sbjct: 1 LPEQIDWR--KKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK 58
Query: 186 GNLNCNGGNIDVAFEYVKQYG-LESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTSG 244
N C GG A++Y+ G +++QA+YPY+ + C + + +
Sbjct: 59 KNHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQG---PCQAASKVVSIDGYNGVPFCN 115
Query: 245 VDHMMHLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGILTW 304
+ + P V ++ + KL+H V IVGY W
Sbjct: 116 EXALKQAVAVQPSTVAIDA--SSAQFQQYSSGIFSGPCGTKLNHGVTIVGYQANY----W 169
Query: 305 IVRNSWGDIGPDHGYFQIER--GANACGIESYAY 336
IVRNSWG + GY ++ R G CGI Y
Sbjct: 170 IVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPY 203
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 139 bits (351), Expect = 1e-39
Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 7/301 (2%)
Query: 40 VDAFKTYIVKWNRTYTDDNEIKTRFEYFKQDGKETDEY-YGTSGSSDRSPQEILQRTGLR 98
+ F+ Y +N++Y + + + F + K + SD S E R +
Sbjct: 2 IKTFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNGGAINHLSDLSLDEFKNRFLM- 60
Query: 99 LTGKEKERLEADRERVKKFLNERKKGPLPKSLDWRQSKVKVLNPVESQGRCGSCWAFATT 158
+ + E L+ + + G P +D R +++ + P+ QG CGS WAF+
Sbjct: 61 -SAEAFEHLKTQFDLNAETNACSINGNAPAEIDLR--QMRTVTPIRMQGGCGSAWAFSGV 117
Query: 159 AILESQVALLKKTLYPLSKSQLVECDHGNLNCNGGNIDVAFEYVKQYGLESQADYPYRNK 218
A ES + L++ +LV+C + C+G I EY++ G+ ++ Y Y +
Sbjct: 118 AATESAYLAYRDQSLDLAEQELVDCASQH-GCHGDTIPRGIEYIQHNGVVQESYYRYVAR 176
Query: 219 ENITFRCTYEKEKAKVFVQDT-WVTSGVDHMMHLLQSGPIGVYLNHRLIESYDGNPIRRN 277
E R ++ + Q + + + S + L +
Sbjct: 177 EQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTII 236
Query: 278 DWACNPHKLDHAVAIVGYGEKNGILTWIVRNSWGDIGPDHGYFQIERGANACGIESYAYL 337
HAV IVGY G+ WIVRNSW D+GY + IE Y Y+
Sbjct: 237 QRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYV 296
Query: 338 A 338
Sbjct: 297 V 297
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 136 bits (343), Expect = 2e-39
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 127 PKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDHG 186
P ++DWR + V+ QG+CGSCWAF+ +E Q L L LS+ LV CD
Sbjct: 2 PAAVDWR--ARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT 59
Query: 187 NLNCNGGNIDVAFEYVKQY---GLESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTS 243
+ C+GG ++ AFE++ Q + ++ YPY + E I+ CT +
Sbjct: 60 DSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELP 119
Query: 244 GVDHMMH--LLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGI 301
+ + L +GP+ V ++ +Y G + +C +LDH V +VGY + +
Sbjct: 120 QDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVM----TSCVSEQLDHGVLLVGYNDSAAV 175
Query: 302 LTWIVRNSWGDIGPDHGYFQIERGANACGIESYAYLASV 340
WI++NSW + GY +I +G+N C ++ A A V
Sbjct: 176 PYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 135 bits (339), Expect = 8e-39
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 127 PKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDHG 186
P+S+DWR + PV++QG CGSCWAF+T A +E ++ L LS+ +LV+CD
Sbjct: 2 PQSIDWR--AKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKH 59
Query: 187 NLNCNGGNIDVAFEYVKQYGLESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTSGVD 246
+ C GG + +YV G+ + YPY+ K+ K K+ ++
Sbjct: 60 SYGCKGGYQTTSLQYVANNGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCET 119
Query: 247 HMMHLLQSGPI--GVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGILTW 304
+ L + P+ V + + Y KLDHAV VGYG +G
Sbjct: 120 SFLGALANQPLSVLVEAGGKPFQLYKSGVF----DGPCGTKLDHAVTAVGYGTSDGKNYI 175
Query: 305 IVRNSWGDIGPDHGYFQIERGA----NACGIESYAY 336
I++NSWG + GY +++R + CG+ +Y
Sbjct: 176 IIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSY 211
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 133 bits (335), Expect = 5e-38
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 14/225 (6%)
Query: 126 LPKSLDWRQ-SKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKT--LYPLSKSQLVE 182
LP S DWR + ++PV +Q CGSC++FA+ +LE+++ +L LS ++V
Sbjct: 1 LPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVS 60
Query: 183 CDHGNLNCNGGNIDVAFEYVKQYGLESQADYPYRNKENITFRCTYEKEKAKVFVQDTW-- 240
C C GG + Q + + + + +
Sbjct: 61 CSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGG 120
Query: 241 ---VTSGVDHMMHLLQSGPIGVYLNHRLIESYDGNPIRRND----WACNPHKLDHAVAIV 293
+ + L+ GP+ V + I + +HAV +V
Sbjct: 121 FYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLV 180
Query: 294 GYG--EKNGILTWIVRNSWGDIGPDHGYFQIERGANACGIESYAY 336
GYG +G+ WIV+NSWG ++GYF+I RG + C IES A
Sbjct: 181 GYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAV 225
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 133 bits (334), Expect = 5e-38
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDH 185
LP+++DWR K + PV QG CGSCWAF+ A +E + L LS+ +LV+C+
Sbjct: 1 LPENVDWR--KKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER 58
Query: 186 GNLNCNGGNIDVAFEYVKQYGLESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTSGV 245
+ C GG A EYV + G+ ++ YPY+ K+ K +
Sbjct: 59 RSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNE 118
Query: 246 DHMMHLLQSGP--IGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGILT 303
++++ + P + V R + Y G K+DHAV VGYG+ G
Sbjct: 119 GNLLNAIAKQPVSVVVESKGRPFQLYKGGIF----EGPCGTKVDHAVTAVGYGKSGGKGY 174
Query: 304 WIVRNSWGDIGPDHGYFQIERG----ANACGIESYAY 336
+++NSWG + GY +I+R CG+ +Y
Sbjct: 175 ILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSY 211
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 130 bits (328), Expect = 4e-37
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 10/217 (4%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDH 185
LP +DWR + ++SQG CG CWAF+ A +E ++ L LS+ +L++C
Sbjct: 1 LPSYVDWR--SAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGR 58
Query: 186 GNLN--CNGGNIDVAFEYVKQYG-LESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVT 242
CNGG I F+++ G + ++ +YPY ++ ++ + +
Sbjct: 59 TQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPY 118
Query: 243 SGVDHMMHLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGIL 302
+ + + P+ V L+ + +DHAV IVGYG + GI
Sbjct: 119 NNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCG--TAIDHAVTIVGYGTEGGID 176
Query: 303 TWIVRNSWGDIGPDHGYFQIER---GANACGIESYAY 336
WIV+NSW + GY +I R GA CGI +
Sbjct: 177 YWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPS 213
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 130 bits (327), Expect = 5e-37
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 9/215 (4%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDH 185
LP +DWR +N +++Q +CGSCWAF+ A +ES + L LS+ +LV+CD
Sbjct: 1 LPSFVDWR--SKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT 58
Query: 186 GNLNCNGGNIDVAFEYVKQYGLESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTSGV 245
+ CNGG ++ AF+Y+ G + + + Y + +
Sbjct: 59 ASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKP-YRLRVVSINGFQRVTRNNE 117
Query: 246 DHMMHLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGILTWI 305
+ + S P+ V + + +H V IVGYG ++G WI
Sbjct: 118 SALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCG--TAQNHGVVIVGYGTQSGKNYWI 175
Query: 306 VRNSWGDIGPDHGYFQIERG----ANACGIESYAY 336
VRNSWG + GY +ER A CGI
Sbjct: 176 VRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPS 210
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 128 bits (321), Expect = 5e-36
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 15/220 (6%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDH 185
+P S+DWR K + V+ QG+CGSCWAF+T +E + L LS+ +LV+CD
Sbjct: 2 VPASVDWR--KKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDT 59
Query: 186 GNLN-CNGGNIDVAFEYVKQYG-LESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTS 243
CNGG +D AFE++KQ G + ++A+YPY + + + +
Sbjct: 60 DQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPEN 119
Query: 244 GVDHMMHLLQSGPI--GVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYG-EKNG 300
+ ++ + + P+ + + Y +LDH VAIVGYG +G
Sbjct: 120 DENALLKAVANQPVSVAIDAGGSDFQFYSEGVF----TGSCGTELDHGVAIVGYGTTIDG 175
Query: 301 ILTWIVRNSWGDIGPDHGYFQIERGA----NACGIESYAY 336
W V+NSWG + GY ++ERG CGI A
Sbjct: 176 TKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEAS 215
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 126 bits (316), Expect = 3e-35
Identities = 70/223 (31%), Positives = 98/223 (43%), Gaps = 10/223 (4%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVEC-- 183
LPKS+DWR K + PV++Q +CGSCWAF+ T LE Q+ L LS+ LV+C
Sbjct: 1 LPKSVDWR--KKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR 58
Query: 184 DHGNLNCNGGNIDVAFEYVKQYG-LESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVT 242
GN CNGG + AF+YVK+ G L+S+ YPY + I
Sbjct: 59 PQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVAQDTGFTVVAPG 118
Query: 243 SGVDHMMHLLQSGPI--GVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGY--GEK 298
M + GPI + H + Y D + V G+
Sbjct: 119 KEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANS 178
Query: 299 NGILTWIVRNSWGDIGPDHGYFQIERGA-NACGIESYAYLASV 340
+ W+V+NSWG +GY +I + N CGI + A +V
Sbjct: 179 DNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 221
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 125 bits (313), Expect = 5e-35
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 126 LPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDH 185
+P+ +DWR + + PV++QG CGSCWAF+ +E + + L S+ +L++CD
Sbjct: 1 IPEYVDWR--QKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDR 58
Query: 186 GNLNCNGGNIDVAFEYVKQYGLESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTSGV 245
+ CNGG A + V QYG+ + YPY + AK
Sbjct: 59 RSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNE 118
Query: 246 DHMMHLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAVAIVGYGEKNGILTWI 305
+++ + + P+ V L + +K+DHAVA VGYG +
Sbjct: 119 GALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCG--NKVDHAVAAVGYGPN----YIL 172
Query: 306 VRNSWGDIGPDHGYFQIERG----ANACGIESYAY 336
++NSWG ++GY +I+RG CG+ + ++
Sbjct: 173 IKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSF 207
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 127 bits (320), Expect = 5e-35
Identities = 79/319 (24%), Positives = 125/319 (39%), Gaps = 31/319 (9%)
Query: 41 DAFKTYIVKWNRTYTDDNEIKTRFEYFKQDGKETDE------------YYGTSGSSDRSP 88
+ + NR Y + E R ++++ K + + D +
Sbjct: 10 AQWTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTS 68
Query: 89 QEILQRTGLRLTGKEKERLEADRERVKKFLNERKKGPLPKSLDWRQSKVKVLNPVESQGR 148
+E Q + + R K E P+S+DWR + + PV++QG+
Sbjct: 69 EEFRQVMN---------GFQNRKPRKGKVFQEPLFYEAPRSVDWR--EKGYVTPVKNQGQ 117
Query: 149 CGSCWAFATTAILESQVALLKKTLYPLSKSQLVECDHGNLN--CNGGNIDVAFEYVKQYG 206
CGSCWAF+ T LE Q+ L LS+ LV+C N CNGG +D AF+YV+ G
Sbjct: 118 CGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNG 177
Query: 207 LESQADYPYRNKENITFRCTYEKEKAKVFVQDTWVTSGVDHMMHLLQSGPIGVYLNHRLI 266
+ + + + A M + GPI V ++
Sbjct: 178 GLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHE 237
Query: 267 ESYDGNPIRRNDWACNPHKLDHAVAIVGYG----EKNGILTWIVRNSWGDIGPDHGYFQI 322
+ C+ +DH V +VGYG E + W+V+NSWG+ GY ++
Sbjct: 238 SFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKM 297
Query: 323 ERGA-NACGIESYAYLASV 340
+ N CGI S A +V
Sbjct: 298 AKDRRNHCGIASAASYPTV 316
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 122 bits (306), Expect = 1e-33
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 24/245 (9%)
Query: 112 ERVKKFLNERKKGPLPKSLDWRQSKVKVLNPVESQGRCGSCWAFATTAILESQVALLKKT 171
E +KK+ ++ + DWR + PV+ Q CGSCWAF++ +ESQ A+ K
Sbjct: 6 EVIKKY--RGEENFDHAAYDWR--LHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNK 61
Query: 172 LYPLSKSQLVECDHGNLNCNG-GNIDVAFEYVKQYGLESQADYPYRNKENITFRCTYEKE 230
L LS+ +LV+C N CNG + + ++ G+ DYPY + E
Sbjct: 62 LITLSEQELVDCSFKNYGCNGGLINNAFEDMIELGGICPDGDYPYVSDAPNLCNIDRCTE 121
Query: 231 KAKVFVQDTWVTSGVDHMMHLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKLDHAV 290
K + + + + + L I V ++ + + D C +L+HAV
Sbjct: 122 KYGIKNYLSVPDNKLKEALRFLGPISISVAVS----DDFAFYKEGIFDGECGD-QLNHAV 176
Query: 291 AIVGYGEKNGILT----------WIVRNSWGDIGPDHGYFQIERG----ANACGIESYAY 336
+VG+G K + +I++NSWG + G+ IE CG+ + A+
Sbjct: 177 MLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAF 236
Query: 337 LASVK 341
+ ++
Sbjct: 237 IPLIE 241
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 118 bits (296), Expect = 8e-32
Identities = 59/238 (24%), Positives = 94/238 (39%), Gaps = 29/238 (12%)
Query: 126 LPKSLDWRQ-SKVKVLNPVESQG---RCGSCWAFATTAILESQVALLKKTLYPLSKS--Q 179
LPKS DWR V + +Q CGSCWA A+T+ + ++ + +K +P + Q
Sbjct: 34 LPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQ 93
Query: 180 LVECDHGNLNCNGGNIDVAFEYVKQYGLESQADYPYRNKE------------NITFRCTY 227
V +C GGN ++Y Q+G+ + Y+ K+ N C
Sbjct: 94 NVIDCGNAGSCEGGNDLSVWDYAHQHGIPDETCNNYQAKDQECDKFNQCGTCNEFKECHA 153
Query: 228 EKEKAKVFVQDTWVTSGVDHMM-HLLQSGPIGVYLNHRLIESYDGNPIRRNDWACNPHKL 286
+ V D SG + MM + +GPI + + I
Sbjct: 154 IRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYI-- 211
Query: 287 DHAVAIVGYGEKNGILTWIVRNSWGDIGPDHGYFQIERGANA--------CGIESYAY 336
+H V++ G+G +G WIVRNSWG+ + G+ +I IE +
Sbjct: 212 NHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCT 269
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 44.2 bits (104), Expect = 1e-05
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 286 LDHAVAIVGYG---EKNGILTWIVRNSWGDIGPDHGYF 320
+ HA+ I G L + V NSWG G +
Sbjct: 372 MTHAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLY 409
Score = 33.8 bits (77), Expect = 0.029
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 141 NPVESQGRCGSCWAFATTAILESQVA 166
PV +Q G W FA T L V
Sbjct: 67 TPVTNQKSSGRAWLFAATNQLRLNVL 92
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 40.3 bits (94), Expect = 2e-04
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Query: 287 DHAVAIVGYG---EKNG-ILTWIVRNSWGDIGPDHGYF 320
HA+ +++G W V NSWG+ GY
Sbjct: 370 THAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYL 407
Score = 34.1 bits (78), Expect = 0.024
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 31/105 (29%)
Query: 141 NPVESQGRCGSCWAFATTAILESQVA-LLKKTLYPLS----------------------- 176
P+ +Q G W F+ ++ L + S
Sbjct: 61 KPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDT 120
Query: 177 -------KSQLVECDHGNLNCNGGNIDVAFEYVKQYGLESQADYP 214
+LV+ N +GG D+ V++YG+ + +P
Sbjct: 121 AQRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFP 165
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Length = 493
Score = 29.9 bits (67), Expect = 0.52
Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 4/98 (4%)
Query: 30 RDLAYDSIKQVDAFKTYIVKWNRTYTDDNEIKTRFEYFKQDGKETDEYYGTSGS----SD 85
KT +V + + R + + +G ++
Sbjct: 364 IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTE 423
Query: 86 RSPQEILQRTGLRLTGKEKERLEADRERVKKFLNERKK 123
+ Q IL +LTG E E+L + + + + E +
Sbjct: 424 QQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLR 461
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 28.3 bits (62), Expect = 1.5
Identities = 12/110 (10%), Positives = 32/110 (29%), Gaps = 2/110 (1%)
Query: 16 VTYNVNTDSAIYVWRDLAYDSIKQVDAFKTYIV--KWNRTYTDDNEIKTRFEYFKQDGKE 73
N ++ I +L + + + D + E + ++
Sbjct: 621 TVTNKPRNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHED 680
Query: 74 TDEYYGTSGSSDRSPQEILQRTGLRLTGKEKERLEADRERVKKFLNERKK 123
T+ + + +L LT + ++L ++ + L K
Sbjct: 681 TENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKETELENLLK 730
>d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 450
Score = 26.8 bits (59), Expect = 4.2
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 16 VTYNVNTDSAIYVWRDLAYDSIKQVDA--FKTYIVKWNRTYTDDNEIKTRFEYFKQDGK 72
YN N D+ + + ++ + I D K I ++ R + + R + + GK
Sbjct: 10 TAYNANIDAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGK 68
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 388
Score = 26.7 bits (58), Expect = 4.5
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 97 LRLT-GKEKERLEADRERVKKFLNERK 122
+R++ E+LE +R+++ L ERK
Sbjct: 360 VRISYATAYEKLEEAMDRMERVLKERK 386
>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 454
Score = 26.7 bits (59), Expect = 5.3
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 16 VTYNVNTDSAIYVWRDLAYDSIKQV--DAFKTYIVKWNRTYTDDNEIKTRFEYFKQDGK 72
+ YN N D+ Y+ + I + + Y + +++ + + GK
Sbjct: 26 LGYNTNIDAIKYLDSKDLEERIIKAGKEEVIKYSEELPDKINTVSQLLGSILWSIRRGK 84
>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus
furiosus [TaxId: 2261]}
Length = 395
Score = 26.1 bits (56), Expect = 7.4
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 97 LRLT-GKEKERLEADRERVKKFLNER 121
R E LE +R +KF+ ER
Sbjct: 370 FRAVFLPPIEILEEAMDRFEKFMKER 395
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId:
1280]}
Length = 183
Score = 25.7 bits (56), Expect = 7.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 282 NPHKLDHAVAIVGYGEKNGILTWIVRNSWGD 312
N L HA+A+VG + N I N W
Sbjct: 124 NDPHLGHALAVVGNAKINDQEKLIYWNPWDT 154
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.133 0.410
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,305,406
Number of extensions: 61930
Number of successful extensions: 274
Number of sequences better than 10.0: 1
Number of HSP's gapped: 216
Number of HSP's successfully gapped: 38
Length of query: 341
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 255
Effective length of database: 1,226,816
Effective search space: 312838080
Effective search space used: 312838080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.9 bits)