Query psy4966
Match_columns 149
No_of_seqs 123 out of 1976
Neff 9.3
Searched_HMMs 46136
Date Fri Aug 16 22:25:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4966.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4966hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176|consensus 100.0 6.7E-37 1.5E-41 243.5 14.8 146 1-148 328-498 (537)
2 COG0318 CaiC Acyl-CoA syntheta 100.0 1.3E-30 2.7E-35 209.3 15.3 144 1-146 320-491 (534)
3 KOG1177|consensus 100.0 9.1E-29 2E-33 190.3 12.1 144 2-147 380-552 (596)
4 PLN02574 4-coumarate--CoA liga 100.0 3.1E-28 6.8E-33 196.0 15.0 146 1-147 348-519 (560)
5 COG0365 Acs Acyl-coenzyme A sy 100.0 1.2E-27 2.7E-32 190.1 13.6 138 2-145 319-481 (528)
6 PTZ00237 acetyl-CoA synthetase 100.0 2.2E-27 4.9E-32 194.3 14.6 130 1-132 408-566 (647)
7 PLN02654 acetate-CoA ligase 99.9 5.3E-27 1.2E-31 192.6 15.7 144 2-147 429-605 (666)
8 PRK05677 long-chain-fatty-acid 99.9 5.7E-27 1.2E-31 188.7 15.6 145 1-147 354-522 (562)
9 PLN02614 long-chain acyl-CoA s 99.9 2.8E-27 6.1E-32 194.2 12.9 126 1-131 414-567 (666)
10 TIGR02188 Ac_CoA_lig_AcsA acet 99.9 1.4E-26 3E-31 188.6 16.2 144 2-147 390-567 (625)
11 PRK00174 acetyl-CoA synthetase 99.9 1.9E-26 4.2E-31 188.2 16.6 145 1-147 398-575 (637)
12 PRK07769 long-chain-fatty-acid 99.9 6.8E-27 1.5E-31 190.7 13.3 129 17-147 392-575 (631)
13 PRK07529 AMP-binding domain pr 99.9 3E-26 6.4E-31 187.2 16.1 144 1-147 361-534 (632)
14 PRK09088 acyl-CoA synthetase; 99.9 3.9E-26 8.4E-31 180.7 16.2 145 1-147 279-450 (488)
15 PLN02246 4-coumarate--CoA liga 99.9 3.6E-26 7.8E-31 183.0 15.8 145 2-147 328-501 (537)
16 PRK06839 acyl-CoA synthetase; 99.9 4.4E-26 9.5E-31 180.3 16.0 144 1-147 291-460 (496)
17 PRK09274 peptide synthase; Pro 99.9 2.6E-26 5.6E-31 184.3 14.7 144 1-146 318-507 (552)
18 PLN02330 4-coumarate--CoA liga 99.9 3.4E-26 7.3E-31 183.6 15.2 146 1-147 332-506 (546)
19 PLN02861 long-chain-fatty-acid 99.9 1.6E-26 3.5E-31 189.6 13.2 125 1-130 411-563 (660)
20 TIGR02316 propion_prpE propion 99.9 4.5E-26 9.7E-31 185.9 15.6 145 2-147 383-569 (628)
21 PLN03051 acyl-activating enzym 99.9 5.4E-26 1.2E-30 180.9 15.6 142 2-146 267-451 (499)
22 PRK08008 caiC putative crotono 99.9 5.4E-26 1.2E-30 180.9 15.4 145 1-147 315-487 (517)
23 PLN02736 long-chain acyl-CoA s 99.9 1.9E-26 4.1E-31 188.8 12.6 127 1-131 404-558 (651)
24 PRK07788 acyl-CoA synthetase; 99.9 8.2E-26 1.8E-30 181.4 15.3 141 1-147 351-516 (549)
25 PTZ00342 acyl-CoA synthetase; 99.9 5.3E-26 1.2E-30 188.4 14.4 127 1-131 489-641 (746)
26 COG1021 EntE Peptide arylation 99.9 2.8E-26 6.1E-31 173.7 11.0 134 12-147 354-502 (542)
27 PLN02860 o-succinylbenzoate-Co 99.9 1.3E-25 2.8E-30 181.0 15.4 123 17-146 365-516 (563)
28 PRK06155 crotonobetaine/carnit 99.9 2.6E-25 5.6E-30 178.6 16.2 144 1-147 320-489 (542)
29 PRK04319 acetyl-CoA synthetase 99.9 1.5E-25 3.2E-30 180.8 14.4 144 1-147 351-524 (570)
30 PRK06145 acyl-CoA synthetase; 99.9 2.7E-25 5.8E-30 176.1 15.5 144 1-147 293-462 (497)
31 TIGR02275 DHB_AMP_lig 2,3-dihy 99.9 3.2E-25 7E-30 177.2 16.1 144 1-147 327-496 (527)
32 PRK08314 long-chain-fatty-acid 99.9 3.3E-25 7.2E-30 177.5 16.1 146 1-147 333-507 (546)
33 PRK06164 acyl-CoA synthetase; 99.9 2.8E-25 6.1E-30 177.8 15.7 146 1-147 322-494 (540)
34 PRK12476 putative fatty-acid-- 99.9 1.2E-25 2.6E-30 182.9 13.7 127 17-146 403-566 (612)
35 PRK08315 AMP-binding domain pr 99.9 3.5E-25 7.7E-30 177.8 16.0 145 2-147 345-516 (559)
36 PRK10946 entE enterobactin syn 99.9 2.7E-25 5.9E-30 178.1 15.2 142 1-146 328-495 (536)
37 PRK12492 long-chain-fatty-acid 99.9 3.3E-25 7.1E-30 178.5 15.7 144 1-147 361-529 (562)
38 PRK05852 acyl-CoA synthetase; 99.9 2.2E-25 4.9E-30 178.3 14.4 144 1-147 323-497 (534)
39 PRK06178 acyl-CoA synthetase; 99.9 3.5E-25 7.5E-30 178.4 15.5 142 4-147 359-531 (567)
40 PRK13382 acyl-CoA synthetase; 99.9 5.4E-25 1.2E-29 176.5 15.7 141 1-147 340-505 (537)
41 COG1022 FAA1 Long-chain acyl-C 99.9 1E-25 2.2E-30 181.5 11.4 115 1-131 380-519 (613)
42 PRK13295 cyclohexanecarboxylat 99.9 7.1E-25 1.5E-29 176.0 16.3 142 1-146 340-507 (547)
43 PRK07514 malonyl-CoA synthase; 99.9 8.7E-25 1.9E-29 173.3 16.5 146 1-147 297-466 (504)
44 PRK07638 acyl-CoA synthetase; 99.9 4.8E-25 1E-29 174.5 14.8 140 1-147 282-446 (487)
45 PRK07470 acyl-CoA synthetase; 99.9 4.2E-25 9E-30 176.4 14.3 143 2-147 309-483 (528)
46 PRK07867 acyl-CoA synthetase; 99.9 1.1E-24 2.3E-29 174.7 16.1 143 1-147 293-470 (529)
47 PRK06060 acyl-CoA synthetase; 99.9 5.2E-25 1.1E-29 181.7 14.7 142 1-147 289-457 (705)
48 TIGR03208 cyc_hxne_CoA_lg cycl 99.9 1.3E-24 2.8E-29 174.1 16.0 142 1-146 338-505 (538)
49 PRK12583 acyl-CoA synthetase; 99.9 1.5E-24 3.3E-29 173.9 16.4 145 1-147 346-517 (558)
50 KOG1256|consensus 99.9 1.7E-25 3.8E-30 179.6 10.8 129 1-133 447-600 (691)
51 PRK10524 prpE propionyl-CoA sy 99.9 1.1E-24 2.4E-29 177.5 15.7 146 1-147 383-570 (629)
52 PRK07059 Long-chain-fatty-acid 99.9 1.1E-24 2.3E-29 175.2 15.3 144 1-147 355-523 (557)
53 PRK13390 acyl-CoA synthetase; 99.9 1.5E-24 3.2E-29 172.3 15.8 143 2-147 299-471 (501)
54 PRK07787 acyl-CoA synthetase; 99.9 1.5E-24 3.3E-29 171.2 15.5 143 1-147 269-438 (471)
55 TIGR01217 ac_ac_CoA_syn acetoa 99.9 9.1E-25 2E-29 179.0 14.6 142 3-147 416-591 (652)
56 PRK05605 long-chain-fatty-acid 99.9 1.5E-24 3.2E-29 174.9 15.6 145 1-147 364-534 (573)
57 PRK06334 long chain fatty acid 99.9 1.1E-24 2.5E-29 174.9 14.9 140 1-147 328-499 (539)
58 PLN02387 long-chain-fatty-acid 99.9 6.4E-25 1.4E-29 181.1 13.7 127 1-131 448-606 (696)
59 PRK08633 2-acyl-glycerophospho 99.9 1.1E-24 2.3E-29 187.0 15.2 142 1-146 926-1106(1146)
60 PRK07656 long-chain-fatty-acid 99.9 2.7E-24 5.7E-29 170.6 16.1 145 1-147 310-481 (513)
61 PRK06087 short chain acyl-CoA 99.9 2.2E-24 4.9E-29 172.9 15.5 143 1-145 329-498 (547)
62 PRK06188 acyl-CoA synthetase; 99.9 2.4E-24 5.3E-29 171.8 15.5 143 2-147 310-482 (524)
63 PRK03584 acetoacetyl-CoA synth 99.9 1.8E-24 4E-29 177.1 15.0 143 2-147 414-590 (655)
64 PRK05851 long-chain-fatty-acid 99.9 1.4E-24 3E-29 173.8 13.7 122 16-145 345-481 (525)
65 PRK08316 acyl-CoA synthetase; 99.9 2.8E-24 6.1E-29 170.9 15.3 144 1-147 315-484 (523)
66 PRK06710 long-chain-fatty-acid 99.9 2.5E-24 5.5E-29 173.2 15.2 145 1-147 351-520 (563)
67 PRK08751 putative long-chain f 99.9 3.1E-24 6.7E-29 172.5 15.5 144 1-147 357-525 (560)
68 TIGR03098 ligase_PEP_1 acyl-Co 99.9 4.2E-24 9E-29 169.7 15.4 145 1-147 303-483 (515)
69 PRK05857 acyl-CoA synthetase; 99.9 4.2E-24 9.2E-29 171.5 14.1 129 1-132 313-476 (540)
70 PRK13388 acyl-CoA synthetase; 99.9 7.2E-24 1.6E-28 170.2 15.2 143 1-146 291-468 (540)
71 PTZ00216 acyl-CoA synthetase; 99.9 3.3E-24 7.2E-29 177.0 13.3 125 1-130 455-608 (700)
72 PLN02430 long-chain-fatty-acid 99.9 5.6E-24 1.2E-28 174.7 14.0 126 1-131 411-564 (660)
73 PRK12316 peptide synthase; Pro 99.9 4.8E-24 1E-28 201.0 14.7 144 1-147 2290-2469(5163)
74 TIGR03443 alpha_am_amid L-amin 99.9 7E-24 1.5E-28 185.2 14.7 129 1-130 558-750 (1389)
75 PRK12467 peptide synthase; Pro 99.9 3E-24 6.5E-29 199.8 13.1 145 1-148 3380-3560(3956)
76 PRK12316 peptide synthase; Pro 99.9 5E-24 1.1E-28 200.8 14.4 141 1-147 799-971 (5163)
77 PRK07786 long-chain-fatty-acid 99.9 1.6E-23 3.5E-28 168.0 15.0 144 1-147 319-489 (542)
78 KOG1175|consensus 99.9 1.6E-23 3.4E-28 168.1 14.3 141 3-146 390-562 (626)
79 PRK08276 long-chain-fatty-acid 99.9 2.2E-23 4.8E-28 165.5 14.9 143 2-147 291-461 (502)
80 PRK03640 O-succinylbenzoic aci 99.9 2.4E-23 5.2E-28 164.3 14.7 141 1-147 281-447 (483)
81 PRK13383 acyl-CoA synthetase; 99.9 3.5E-23 7.6E-28 165.1 15.4 141 1-147 320-485 (516)
82 PRK10252 entF enterobactin syn 99.9 2.7E-23 5.9E-28 180.3 15.3 145 1-147 745-932 (1296)
83 PRK12406 long-chain-fatty-acid 99.9 1.1E-22 2.3E-27 161.9 16.5 144 1-147 299-468 (509)
84 PLN03102 acyl-activating enzym 99.9 5.1E-23 1.1E-27 166.6 14.8 120 27-147 373-519 (579)
85 PRK08974 long-chain-fatty-acid 99.9 6.9E-23 1.5E-27 164.8 15.5 143 1-147 353-520 (560)
86 PRK07445 O-succinylbenzoic aci 99.9 6.1E-23 1.3E-27 162.0 14.3 129 2-147 258-412 (452)
87 TIGR03205 pimA dicarboxylate-- 99.9 8.5E-23 1.8E-27 163.7 15.3 145 1-147 340-511 (541)
88 PRK09192 acyl-CoA synthetase; 99.9 4.7E-23 1E-27 166.6 13.7 127 16-147 385-528 (579)
89 PRK13391 acyl-CoA synthetase; 99.9 1.2E-22 2.6E-27 161.8 15.8 143 2-147 304-474 (511)
90 PRK05620 long-chain-fatty-acid 99.9 1.1E-22 2.4E-27 164.3 15.7 145 1-148 326-523 (576)
91 PRK07008 long-chain-fatty-acid 99.9 6.5E-23 1.4E-27 164.5 13.9 141 1-147 321-498 (539)
92 TIGR01734 D-ala-DACP-lig D-ala 99.9 1.3E-22 2.7E-27 160.9 15.0 143 1-146 287-466 (502)
93 TIGR02262 benz_CoA_lig benzoat 99.9 1.4E-22 3E-27 161.2 15.0 144 1-147 306-476 (508)
94 PRK06187 long-chain-fatty-acid 99.9 2.7E-22 5.8E-27 159.2 15.6 144 1-147 309-484 (521)
95 PRK08180 feruloyl-CoA synthase 99.9 3.9E-23 8.5E-28 168.3 10.5 118 2-132 369-517 (614)
96 PLN02479 acetate-CoA ligase 99.9 1.4E-22 3.1E-27 163.5 13.3 128 18-147 374-524 (567)
97 PRK08043 bifunctional acyl-[ac 99.9 2.3E-22 5.1E-27 166.4 14.7 138 1-147 507-677 (718)
98 PRK08162 acyl-CoA synthetase; 99.9 4.1E-22 9E-27 159.7 15.3 128 18-147 360-505 (545)
99 PRK07868 acyl-CoA synthetase; 99.9 3.9E-22 8.4E-27 170.0 15.6 139 1-146 747-923 (994)
100 PRK05691 peptide synthase; Val 99.9 2.7E-22 5.8E-27 187.9 15.0 144 1-147 1417-1593(4334)
101 PRK12467 peptide synthase; Pro 99.9 2.9E-22 6.3E-27 186.7 15.2 144 1-147 1863-2050(3956)
102 PRK05850 acyl-CoA synthetase; 99.9 2.5E-22 5.5E-27 162.1 12.9 107 25-134 378-510 (578)
103 PRK06018 putative acyl-CoA syn 99.9 1.6E-21 3.6E-26 156.4 16.2 143 1-148 321-500 (542)
104 PRK04813 D-alanine--poly(phosp 99.9 1.3E-21 2.8E-26 155.0 14.4 142 2-146 290-467 (503)
105 PRK07824 O-succinylbenzoic aci 99.9 1.5E-21 3.2E-26 149.4 14.2 130 1-147 178-322 (358)
106 PRK09029 O-succinylbenzoic aci 99.9 7.7E-22 1.7E-26 155.3 12.7 129 2-147 268-418 (458)
107 PLN03052 acetate--CoA ligase; 99.9 3E-21 6.4E-26 160.1 16.2 141 2-145 501-680 (728)
108 PRK05691 peptide synthase; Val 99.9 1.9E-21 4.1E-26 182.3 15.4 143 2-147 2478-2662(4334)
109 KOG1180|consensus 99.9 9.6E-22 2.1E-26 153.9 10.8 127 1-131 430-586 (678)
110 PRK06814 acylglycerophosphoeth 99.9 6.5E-21 1.4E-25 164.1 14.8 136 2-146 936-1095(1140)
111 PRK12582 acyl-CoA synthetase; 99.9 1.5E-21 3.3E-26 159.2 9.5 111 2-121 381-522 (624)
112 PRK07798 acyl-CoA synthetase; 99.9 2.5E-20 5.5E-25 148.4 16.1 145 1-147 325-497 (533)
113 PRK08279 long-chain-acyl-CoA s 99.9 1.9E-20 4.1E-25 152.0 14.8 145 1-148 341-530 (600)
114 PRK07768 long-chain-fatty-acid 99.8 3.1E-20 6.7E-25 149.0 13.3 112 16-130 360-488 (545)
115 TIGR01923 menE O-succinylbenzo 99.8 1.5E-19 3.3E-24 141.0 14.5 137 1-147 246-407 (436)
116 TIGR01733 AA-adenyl-dom amino 99.8 3E-20 6.4E-25 143.6 9.0 109 1-111 263-408 (408)
117 PF00501 AMP-binding: AMP-bind 99.8 7.4E-19 1.6E-23 136.4 7.5 90 1-91 306-407 (417)
118 PRK08308 acyl-CoA synthetase; 99.7 5.1E-17 1.1E-21 126.6 14.2 120 1-148 239-379 (414)
119 PRK09188 serine/threonine prot 99.6 4.7E-15 1E-19 114.1 11.3 75 70-147 207-294 (365)
120 KOG1179|consensus 99.6 5.8E-14 1.2E-18 110.9 13.1 145 1-146 384-577 (649)
121 TIGR02155 PA_CoA_ligase phenyl 99.5 5.2E-13 1.1E-17 104.6 12.4 118 2-132 224-369 (422)
122 COG1020 EntF Non-ribosomal pep 99.3 2.9E-12 6.3E-17 105.0 7.5 101 2-104 516-642 (642)
123 TIGR02372 4_coum_CoA_lig 4-cou 99.3 3.9E-11 8.5E-16 93.4 11.2 71 72-147 275-361 (386)
124 PTZ00297 pantothenate kinase; 98.8 3.3E-08 7.2E-13 87.4 11.0 113 2-130 782-905 (1452)
125 PF13193 AMP-binding_C: AMP-bi 98.8 1.3E-08 2.8E-13 61.0 4.9 47 95-147 1-47 (73)
126 TIGR03335 F390_ftsA coenzyme F 98.6 2.5E-06 5.4E-11 67.7 13.3 122 2-132 233-385 (445)
127 KOG3628|consensus 98.5 1.6E-06 3.5E-11 73.8 10.5 107 19-131 1156-1298(1363)
128 COG1541 PaaK Coenzyme F390 syn 98.4 1.1E-05 2.4E-10 63.5 12.2 118 2-132 239-385 (438)
129 KOG1178|consensus 98.0 5E-05 1.1E-09 65.3 8.7 77 71-147 453-544 (1032)
130 KOG3628|consensus 97.4 0.0013 2.8E-08 56.8 9.0 88 25-113 511-636 (1363)
131 PF14535 AMP-binding_C_2: AMP- 95.1 0.064 1.4E-06 33.6 4.9 43 92-134 5-47 (96)
132 PF04443 LuxE: Acyl-protein sy 94.8 0.26 5.6E-06 38.5 8.4 70 2-85 261-331 (365)
133 PF09580 Spore_YhcN_YlaJ: Spor 75.8 10 0.00022 26.2 5.4 48 92-145 76-123 (177)
134 PF00403 HMA: Heavy-metal-asso 70.4 13 0.00029 20.5 4.2 48 92-147 12-59 (62)
135 PF11253 DUF3052: Protein of u 69.5 12 0.00026 24.8 4.2 41 73-114 52-112 (127)
136 PF00101 RuBisCO_small: Ribulo 66.8 19 0.00042 22.7 4.6 38 92-131 61-98 (99)
137 cd00307 RuBisCO_small_like Rib 63.5 32 0.00069 21.1 5.1 37 92-130 47-83 (84)
138 TIGR02898 spore_YhcN_YlaJ spor 61.0 20 0.00044 24.7 4.2 23 92-114 55-77 (158)
139 cd03527 RuBisCO_small Ribulose 60.7 36 0.00078 21.5 5.0 37 92-130 62-98 (99)
140 COG4451 RbcS Ribulose bisphosp 56.0 56 0.0012 21.5 5.8 39 92-132 69-107 (127)
141 PF05452 Clavanin: Clavanin; 55.9 4.2 9E-05 23.7 0.2 7 72-78 73-79 (80)
142 PF01060 DUF290: Transthyretin 48.0 26 0.00056 20.9 2.8 18 17-35 5-22 (80)
143 PF14597 Lactamase_B_5: Metall 47.8 83 0.0018 22.5 5.5 44 70-113 128-179 (199)
144 PF01037 AsnC_trans_reg: AsnC 44.7 58 0.0013 18.3 5.6 44 93-146 12-55 (74)
145 PF01514 YscJ_FliF: Secretory 41.3 85 0.0018 22.5 5.1 45 92-136 116-167 (206)
146 PRK01322 6-carboxyhexanoate--C 38.9 1.2E+02 0.0026 22.5 5.5 53 40-100 171-228 (242)
147 COG2351 Transthyretin-like pro 37.3 84 0.0018 20.6 4.0 16 16-32 18-33 (124)
148 PRK00702 ribose-5-phosphate is 36.1 1E+02 0.0022 22.4 4.8 38 74-112 158-202 (220)
149 PRK13978 ribose-5-phosphate is 35.8 1E+02 0.0022 22.7 4.7 40 73-112 161-208 (228)
150 PF03927 NapD: NapD protein; 35.5 73 0.0016 19.0 3.4 36 78-113 31-73 (79)
151 PRK05934 type III secretion sy 35.4 2.1E+02 0.0046 22.2 6.8 52 92-143 72-127 (341)
152 PF11974 MG1: Alpha-2-macroglo 34.9 36 0.00079 21.2 2.1 20 17-37 23-42 (97)
153 PF07494 Reg_prop: Two compone 33.7 39 0.00085 15.0 1.6 10 81-90 11-20 (24)
154 PRK15348 type III secretion sy 33.5 1.5E+02 0.0033 22.0 5.4 21 93-113 109-129 (249)
155 PF06970 RepA_N: Replication i 33.1 43 0.00093 20.0 2.1 20 81-100 42-62 (76)
156 COG2151 PaaD Predicted metal-s 32.9 1.4E+02 0.003 19.3 5.4 29 92-120 68-96 (111)
157 PF10955 DUF2757: Protein of u 32.2 75 0.0016 19.1 3.0 31 77-107 38-69 (76)
158 PLN02384 ribose-5-phosphate is 31.9 1.2E+02 0.0026 22.8 4.7 34 79-112 203-244 (264)
159 TIGR00021 rpiA ribose 5-phosph 31.9 1.5E+02 0.0033 21.5 5.1 32 81-112 163-202 (218)
160 PRK00114 hslO Hsp33-like chape 31.1 2.4E+02 0.0051 21.4 8.7 71 42-116 71-163 (293)
161 TIGR02544 III_secr_YscJ type I 30.8 2E+02 0.0043 20.4 6.7 22 92-113 108-129 (193)
162 PF04658 TAFII55_N: TAFII55 pr 29.5 48 0.001 22.9 2.1 41 42-82 40-83 (162)
163 PF03744 BioW: 6-carboxyhexano 29.5 2E+02 0.0043 21.3 5.4 19 41-59 172-192 (239)
164 PF01430 HSP33: Hsp33 protein; 29.3 1E+02 0.0022 23.2 4.0 67 42-115 70-161 (280)
165 cd08047 TAF7 TATA Binding Prot 29.2 40 0.00087 23.2 1.7 41 42-82 38-81 (162)
166 PF08478 POTRA_1: POTRA domain 28.1 32 0.00069 19.4 0.9 26 88-113 31-56 (69)
167 PF01883 DUF59: Domain of unkn 27.8 72 0.0016 18.2 2.4 20 92-111 53-72 (72)
168 cd01398 RPI_A RPI_A: Ribose 5- 27.5 1.9E+02 0.004 20.8 5.0 39 74-112 154-202 (213)
169 PF11303 DUF3105: Protein of u 27.3 1.9E+02 0.0042 19.1 5.4 63 84-148 48-118 (130)
170 PRK09509 fieF ferrous iron eff 26.6 2.2E+02 0.0047 21.5 5.4 41 93-133 215-255 (299)
171 PRK06201 hypothetical protein; 26.4 1.2E+02 0.0027 21.9 3.9 31 73-104 159-189 (221)
172 TIGR01204 bioW 6-carboxyhexano 26.3 2.6E+02 0.0057 20.6 5.5 53 40-100 164-221 (232)
173 TIGR00489 aEF-1_beta translati 25.8 1.2E+02 0.0026 18.7 3.2 23 92-114 63-85 (88)
174 cd00498 Hsp33 Heat shock prote 25.8 2.9E+02 0.0063 20.7 8.7 71 42-116 67-159 (275)
175 cd04888 ACT_PheB-BS C-terminal 25.2 74 0.0016 18.0 2.2 22 92-113 55-76 (76)
176 PF08887 GAD-like: GAD-like do 25.1 1.4E+02 0.0031 19.1 3.6 31 84-114 49-85 (109)
177 PF11623 DUF3252: Protein of u 23.4 1.1E+02 0.0024 16.9 2.4 14 22-35 2-15 (53)
178 PRK09262 hypothetical protein; 23.3 1.4E+02 0.003 21.8 3.6 30 73-103 157-186 (225)
179 COG0129 IlvD Dihydroxyacid deh 22.7 1.5E+02 0.0033 24.9 4.1 33 73-105 506-540 (575)
180 TIGR02962 hdxy_isourate hydrox 22.6 2.2E+02 0.0048 18.3 4.2 15 17-32 11-25 (112)
181 PF06026 Rib_5-P_isom_A: Ribos 22.5 1.2E+02 0.0026 21.2 3.1 40 74-113 111-158 (173)
182 cd05822 TLP_HIUase HIUase (5-h 22.4 2.3E+02 0.0049 18.3 4.3 16 16-32 10-25 (112)
183 PRK08245 hypothetical protein; 21.7 2E+02 0.0043 21.1 4.3 31 73-104 168-198 (240)
184 COG0120 RpiA Ribose 5-phosphat 21.6 1.5E+02 0.0031 21.9 3.4 33 81-113 168-207 (227)
185 PF10102 DUF2341: Domain of un 21.5 1.6E+02 0.0036 18.0 3.2 39 25-64 3-56 (89)
186 PF09695 YtfJ_HI0045: Bacteria 21.2 1.8E+02 0.004 20.1 3.7 25 78-102 127-156 (160)
187 KOG3050|consensus 21.1 30 0.00064 25.7 -0.2 22 59-80 78-102 (299)
188 PF08255 Leader_Trp: Trp-opero 21.1 48 0.001 13.0 0.5 6 71-76 8-13 (14)
189 PF03321 GH3: GH3 auxin-respon 20.8 4.9E+02 0.011 21.6 7.9 79 38-132 351-452 (528)
190 TIGR02798 ligK_PcmE 4-carboxy- 20.8 1.7E+02 0.0036 21.3 3.7 30 73-103 155-184 (222)
191 PF07194 P2: P2 response regul 20.7 2E+02 0.0044 17.1 4.3 22 92-113 61-82 (84)
No 1
>KOG1176|consensus
Probab=100.00 E-value=6.7e-37 Score=243.54 Aligned_cols=146 Identities=40% Similarity=0.705 Sum_probs=137.6
Q ss_pred CeeeeccCCccc--------c--cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSK--------Q--KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~--------~--~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
+.+.||+||.+. . +.+++|+ ++++++..+.+ ++|+.+++++.|||+++|++ |.|||+||++|++.|+
T Consensus 328 v~q~YGmTE~~~~~~~~~~~~e~k~~svG~-~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~ 405 (537)
T KOG1176|consen 328 VIQGYGMTEAGGLITSNDWGPERKPGSVGR-LLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFD 405 (537)
T ss_pred EEEeeccccccCceeecCCCccCcccccCc-cccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcc
Confidence 368999999982 2 6889999 99999988888 99999999999999999999 9999999999999997
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.+|||+|||+|++|+||+|+|+ +|.|||++|..||.|.||+|++.+|+.+|+.++|+|+++++..+
T Consensus 406 ~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~l 485 (537)
T KOG1176|consen 406 DDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTL 485 (537)
T ss_pred cCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcC
Confidence 7799999999999999999997 99999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhccc
Q psy4966 136 TAEEVKQFVEFPR 148 (149)
Q Consensus 136 ~~~~l~~~l~~~~ 148 (149)
+.++|.++|+++.
T Consensus 486 te~di~~~v~k~l 498 (537)
T KOG1176|consen 486 TEKDIIEYVRKKL 498 (537)
T ss_pred CHHHHHHHHHhhC
Confidence 9999999999864
No 2
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=1.3e-30 Score=209.33 Aligned_cols=144 Identities=40% Similarity=0.687 Sum_probs=128.4
Q ss_pred CeeeeccCCccc-----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSK-----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~-----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||++. ...+++|+ |+|+++++|+|++++.++| |++|||+++||+ +.|||++|+.|...|
T Consensus 320 i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f 397 (534)
T COG0318 320 ILEGYGLTETSPVVTINPPDDLLAKPGSVGR-PLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAF 397 (534)
T ss_pred eEEeecccccCceeecCCCchhhhcCCcccc-cCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhh
Confidence 468999999984 24556677 9999999999955555666 999999999999 999999999999988
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCC--
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPN-- 132 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~-- 132 (149)
..+|||+|||+|++|++|+++|+ +|.|||.+|.+||.|.+++|++++++.+|+.++|+++++++
T Consensus 398 ~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~ 477 (534)
T COG0318 398 DEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGD 477 (534)
T ss_pred ccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCC
Confidence 55699999999999999999997 99999999999999999999999999999999999999876
Q ss_pred CCCCHHHHHHHhhc
Q psy4966 133 SSVTAEEVKQFVEF 146 (149)
Q Consensus 133 ~~~~~~~l~~~l~~ 146 (149)
...+.++|.++|++
T Consensus 478 ~~~~~~~i~~~~~~ 491 (534)
T COG0318 478 AELTAEELRAFLRK 491 (534)
T ss_pred CCCCHHHHHHHHHh
Confidence 35588999999886
No 3
>KOG1177|consensus
Probab=99.96 E-value=9.1e-29 Score=190.31 Aligned_cols=144 Identities=33% Similarity=0.540 Sum_probs=133.8
Q ss_pred eeeeccCCccc------------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 2 FLVVGLVGKSK------------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 2 ~~~~g~~e~~~------------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
.-+||+||+++ ....++|. .+++.++.++| +.|.++|.|+.|||++||++ |+|||++++.|.+..
T Consensus 380 ~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~-~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti 457 (596)
T KOG1177|consen 380 AVAYGLTETSPVLFMSLLGDPPEERIKSVGH-LMDHYEAAIVD-KDGSEVPLGTKGELLIRGYSTMLGYWGEEEKTKETI 457 (596)
T ss_pred EEEeeccccCcceeeecCCCCHHHHHhhhhh-ccccccccccc-CCCCccccCCCceEEEEechhheeecCCcccchhhc
Confidence 46899999985 34567888 89999999999 99999999999999999999 999999999999999
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
..+.||+|||++.+|++|+++|+ +|.|||+.|.+||.|.++.|++++|...|+.+||+|.+.++..
T Consensus 458 ~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e 537 (596)
T KOG1177|consen 458 GNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAE 537 (596)
T ss_pred ccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeecccc
Confidence 88999999999999999999997 9999999999999999999999999999999999999987654
Q ss_pred --CCHHHHHHHhhcc
Q psy4966 135 --VTAEEVKQFVEFP 147 (149)
Q Consensus 135 --~~~~~l~~~l~~~ 147 (149)
.+.++|+++|+.+
T Consensus 538 ~~~t~E~lKa~Ck~k 552 (596)
T KOG1177|consen 538 GKTTAETLKAMCKGK 552 (596)
T ss_pred ccccHHHHHHHHhcc
Confidence 5899999999876
No 4
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.96 E-value=3.1e-28 Score=196.04 Aligned_cols=146 Identities=34% Similarity=0.607 Sum_probs=131.2
Q ss_pred CeeeeccCCccc-----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSK-----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~-----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||++. ....++|+ |+|+++++|+|+++|++++.|+.|||+++|+. +.|||++++.+...|
T Consensus 348 v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~-~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~ 426 (560)
T PLN02574 348 FIQGYGMTESTAVGTRGFNTEKLSKYSSVGL-LAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVMKGYLNNPKATQSTI 426 (560)
T ss_pred EEecccccccCceeecCCCccccCCCCceee-eCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchhhhhcCChhHhhhhc
Confidence 367899999753 12346787 99999999999888999999999999999999 999999999999988
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
..+|||+|||+|++|++|+++|. ++.|||++|.+|++|.+++|++++++..|+.++++|+.+++..
T Consensus 427 ~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 506 (560)
T PLN02574 427 DKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGST 506 (560)
T ss_pred cCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcceEEEEEeCCCCC
Confidence 78999999999999999999997 8999999999999999999999999988999999999887777
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+.+++.+++++.
T Consensus 507 ~~~~~l~~~~~~~ 519 (560)
T PLN02574 507 LSQEAVINYVAKQ 519 (560)
T ss_pred CCHHHHHHHHHHh
Confidence 7888888888764
No 5
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.95 E-value=1.2e-27 Score=190.08 Aligned_cols=138 Identities=29% Similarity=0.401 Sum_probs=121.5
Q ss_pred eeeeccCCccc------c--cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcC--C-CccccCCchhhhcccCC
Q psy4966 2 FLVVGLVGKSK------Q--KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGD--V-FLGYRNKVEATKEMLDD 70 (149)
Q Consensus 2 ~~~~g~~e~~~------~--~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~--~-~~gY~~~~~~~~~~~~~ 70 (149)
...||+||++. - +..+.|+ |+||+++.++| ++|+++++|+ |+|+++.+ . +.+||++++.+.+.+.+
T Consensus 319 ~d~~gqTEtg~~~~~~~~~~~~g~~g~-p~pG~~~~vvd-d~g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~ 395 (528)
T COG0365 319 LDIYGQTETGMGFIAGRPPVKNGSSGL-PLPGYAVRRVD-DEGNPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFG 395 (528)
T ss_pred eccccccccCccccCCCCCcCCCCCCC-CCCCceeEEEC-CCCCcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhh
Confidence 45799999972 1 4566677 99999999999 6699999999 99999997 5 99999999999998854
Q ss_pred CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCC
Q psy4966 71 DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVT 136 (149)
Q Consensus 71 ~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~ 136 (149)
. ||.|||.+++|+||++||+ ++.|||++|.+||.|.||+|++++|+..|+.++|||+++++...+
T Consensus 396 ~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~ 474 (528)
T COG0365 396 R-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPN 474 (528)
T ss_pred c-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCChH
Confidence 4 9999999999999999998 899999999999999999999999999999999999999887655
Q ss_pred HHHHHHHhh
Q psy4966 137 AEEVKQFVE 145 (149)
Q Consensus 137 ~~~l~~~l~ 145 (149)
+|.+.++
T Consensus 475 --~L~~ei~ 481 (528)
T COG0365 475 --ELAEEIR 481 (528)
T ss_pred --HHHHHHH
Confidence 4544443
No 6
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.95 E-value=2.2e-27 Score=194.26 Aligned_cols=130 Identities=20% Similarity=0.229 Sum_probs=116.2
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcC---C-CccccCCchhhhc
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGD---V-FLGYRNKVEATKE 66 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~---~-~~gY~~~~~~~~~ 66 (149)
++..||+||++.. ...++|+ |+|+++++|+| ++|++++.|+.|||++++| . +.|||++++.+..
T Consensus 408 i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~-p~~g~~~~i~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~ 485 (647)
T PTZ00237 408 SSRGYGQTEIGITYLYCYGHINIPYNATGV-PSIFIKPSILS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQ 485 (647)
T ss_pred EEeeechHHhChhhhccCCCCCCCCCCCcc-CcCCceEEEEC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHH
Confidence 3578999998632 1257788 99999999999 7899999999999999986 6 8999999999988
Q ss_pred ccCC-CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 67 MLDD-DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 67 ~~~~-~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
.|.. +|||+|||+|++|++|+++|+ +|.|||++|.+||.|.+++|++++++.+|+.++|+|++++
T Consensus 486 ~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~ 565 (647)
T PTZ00237 486 LFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQ 565 (647)
T ss_pred HHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEecc
Confidence 7743 789999999999999999997 9999999999999999999999999999999999999884
Q ss_pred C
Q psy4966 132 N 132 (149)
Q Consensus 132 ~ 132 (149)
+
T Consensus 566 ~ 566 (647)
T PTZ00237 566 D 566 (647)
T ss_pred C
Confidence 3
No 7
>PLN02654 acetate-CoA ligase
Probab=99.95 E-value=5.3e-27 Score=192.58 Aligned_cols=144 Identities=22% Similarity=0.183 Sum_probs=123.6
Q ss_pred eeeeccCCccc-----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEc--CC-CccccCCchhhhcc
Q psy4966 2 FLVVGLVGKSK-----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKG--DV-FLGYRNKVEATKEM 67 (149)
Q Consensus 2 ~~~~g~~e~~~-----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~--~~-~~gY~~~~~~~~~~ 67 (149)
...||+||.+. ...+++|+ |+||++++|+| ++|++++.++.|||++++ |. +.|||++++.+...
T Consensus 429 ~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~-p~~g~~v~i~d-~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~ 506 (666)
T PLN02654 429 SDTWWQTETGGFMITPLPGAWPQKPGSATF-PFFGVQPVIVD-EKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETT 506 (666)
T ss_pred eccccccccCCeeeccCCCCCCCCCCccCC-CCCCceEEEEC-CCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHh
Confidence 46789998752 34567888 99999999999 889999999999999999 56 99999999988776
Q ss_pred cCC--CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 68 LDD--DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 68 ~~~--~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
+.. +|||+|||++++|+||+++|+ +|.|||++|.+||+|.+++|++++++..|+.++++|++++
T Consensus 507 ~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~ 586 (666)
T PLN02654 507 YFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVE 586 (666)
T ss_pred hhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECC
Confidence 532 789999999999999999997 9999999999999999999999999999999999999988
Q ss_pred CCCCCH---HHHHHHhhcc
Q psy4966 132 NSSVTA---EEVKQFVEFP 147 (149)
Q Consensus 132 ~~~~~~---~~l~~~l~~~ 147 (149)
+...+. ++|+++|++.
T Consensus 587 ~~~~~~~l~~~l~~~~~~~ 605 (666)
T PLN02654 587 GVPYSEELRKSLILTVRNQ 605 (666)
T ss_pred CCCCCHHHHHHHHHHHHHh
Confidence 765543 3566666543
No 8
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=5.7e-27 Score=188.72 Aligned_cols=145 Identities=37% Similarity=0.555 Sum_probs=130.0
Q ss_pred CeeeeccCCcccc---------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCC
Q psy4966 1 MFLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDD 70 (149)
Q Consensus 1 ~~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~ 70 (149)
++..||+||.+.. ...++|. |+|++.++++| ++++++|.|+.|||+++|+. +.||+++++.+.+.|..
T Consensus 354 v~~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~ 431 (562)
T PRK05677 354 ICEGYGMTETSPVVSVNPSQAIQVGTIGI-PVPSTLCKVID-DDGNELPLGEVGELCVKGPQVMKGYWQRPEATDEILDS 431 (562)
T ss_pred eeccCCccccCcceeecCccCCCCCccCc-cCCCCEEEEEC-CCCCCCCCCCCeEEEEecCccchhhcCCchhhhhccCC
Confidence 4678999997632 2356887 99999999999 77899999999999999999 99999999999999977
Q ss_pred CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCC
Q psy4966 71 DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVT 136 (149)
Q Consensus 71 ~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~ 136 (149)
++||+|||+++++++|+++|. +|.|||++|.+|++|.+++|+++++...|+.+++++++.++...+
T Consensus 432 ~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~ 511 (562)
T PRK05677 432 DGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETLT 511 (562)
T ss_pred CCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCCCC
Confidence 899999999999999999986 899999999999999999999999999899999999887766678
Q ss_pred HHHHHHHhhcc
Q psy4966 137 AEEVKQFVEFP 147 (149)
Q Consensus 137 ~~~l~~~l~~~ 147 (149)
.+.+++++++.
T Consensus 512 ~~~l~~~~~~~ 522 (562)
T PRK05677 512 KEQVMEHMRAN 522 (562)
T ss_pred HHHHHHHHHHh
Confidence 88888888764
No 9
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.95 E-value=2.8e-27 Score=194.25 Aligned_cols=126 Identities=29% Similarity=0.470 Sum_probs=109.2
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEEcCCC--CccCCCCCeeEEEEEcCC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVT--SVQLPDGKTGELCLKGDV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~--g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||++. ...+++|+ |+|+++++|+|+++ ++++++|+.|||+++|+. |.|||++|+.|++.
T Consensus 414 i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~ 492 (666)
T PLN02614 414 VLQGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEV 492 (666)
T ss_pred EEeeCchHhhhhheeeeccccCCcCCcccC-cCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhh
Confidence 367899999753 12467888 99999999998333 478899999999999999 99999999999999
Q ss_pred cCCCCeEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 68 LDDDGWLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 68 ~~~~~~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
| .+|||+|||+|++|+||+|+|+ +|.|||++|.+||.|.+++|++..... .++|+|+++.
T Consensus 493 f-~dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~---~l~alvv~~~ 567 (666)
T PLN02614 493 L-IDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFES---FLVAIANPNQ 567 (666)
T ss_pred h-ccCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCcc---eEEEEEeCCH
Confidence 8 5899999999999999999997 899999999999999999999975433 3888888653
No 10
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=1.4e-26 Score=188.62 Aligned_cols=144 Identities=24% Similarity=0.213 Sum_probs=124.8
Q ss_pred eeeeccCCccc-----------ccccCcCccccCCceEEEEcCCCCccCC-CCCeeEEEEEc--CC-CccccCCchhhhc
Q psy4966 2 FLVVGLVGKSK-----------QKATLTGKHFQEHNAIKIIDPVTSVQLP-DGKTGELCLKG--DV-FLGYRNKVEATKE 66 (149)
Q Consensus 2 ~~~~g~~e~~~-----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~-~g~~Gel~v~~--~~-~~gY~~~~~~~~~ 66 (149)
+..||+||++. ...+++|+ |+|+++++++| ++|++++ +|+.|||++++ |. +.|||++++.+..
T Consensus 390 ~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~-p~~g~~~~i~d-~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~ 467 (625)
T TIGR02188 390 VDTWWQTETGGIMITPLPGATPTKPGSATL-PFFGIEPAVVD-EEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVD 467 (625)
T ss_pred EecccccccCCceeecCCCCCCcCCCcccC-CcCCceEEEEC-CCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHH
Confidence 56899999753 23456888 99999999999 8899999 99999999999 46 9999999988777
Q ss_pred ccC--CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 67 MLD--DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 67 ~~~--~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
.+. .+|||+|||++++|++|+++|+ +|.|||++|.+||+|.+++|++++++..|+.++++|++.
T Consensus 468 ~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~ 547 (625)
T TIGR02188 468 TYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLK 547 (625)
T ss_pred HHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeC
Confidence 663 3789999999999999999997 999999999999999999999999999999999999998
Q ss_pred CCCCCCH---HHHHHHhhcc
Q psy4966 131 PNSSVTA---EEVKQFVEFP 147 (149)
Q Consensus 131 ~~~~~~~---~~l~~~l~~~ 147 (149)
++...+. ++|+++|++.
T Consensus 548 ~~~~~~~~~~~~l~~~~~~~ 567 (625)
T TIGR02188 548 DGYEPDDELRKELRKHVRKE 567 (625)
T ss_pred CCCCCCHHHHHHHHHHHHhh
Confidence 7765543 5677777654
No 11
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.95 E-value=1.9e-26 Score=188.15 Aligned_cols=145 Identities=23% Similarity=0.229 Sum_probs=125.2
Q ss_pred CeeeeccCCcccc-----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEc--CC-CccccCCchhhhc
Q psy4966 1 MFLVVGLVGKSKQ-----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKG--DV-FLGYRNKVEATKE 66 (149)
Q Consensus 1 ~~~~~g~~e~~~~-----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~--~~-~~gY~~~~~~~~~ 66 (149)
++..||+||++.. ...++|+ |+|+++++|+| ++|++++.|+.|||+++| +. +.|||++++.+..
T Consensus 398 i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~-p~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~ 475 (637)
T PRK00174 398 IVDTWWQTETGGIMITPLPGATPLKPGSATR-PLPGIQPAVVD-EEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVK 475 (637)
T ss_pred eEecccccccCCceEecCCCCCCcCCCcccC-CCCCceEEEEC-CCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHH
Confidence 3578999998632 2356888 99999999999 889999999999999999 56 9999999998877
Q ss_pred ccC--CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 67 MLD--DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 67 ~~~--~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
.+. .+|||+|||++++|++|+++|+ +|.|||++|.+||+|.+++|++.+++..|+.++++|++.
T Consensus 476 ~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~ 555 (637)
T PRK00174 476 TYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLK 555 (637)
T ss_pred hhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEEC
Confidence 652 3789999999999999999997 999999999999999999999999999999999999998
Q ss_pred CCCCCC---HHHHHHHhhcc
Q psy4966 131 PNSSVT---AEEVKQFVEFP 147 (149)
Q Consensus 131 ~~~~~~---~~~l~~~l~~~ 147 (149)
++...+ .++|+++|++.
T Consensus 556 ~~~~~~~~~~~~l~~~l~~~ 575 (637)
T PRK00174 556 GGEEPSDELRKELRNWVRKE 575 (637)
T ss_pred CCCCCCHHHHHHHHHHHHhh
Confidence 765544 45777777654
No 12
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=6.8e-27 Score=190.66 Aligned_cols=129 Identities=27% Similarity=0.439 Sum_probs=113.4
Q ss_pred CcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCC-----------------CCeEEcCc
Q psy4966 17 LTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDD-----------------DGWLHTGD 78 (149)
Q Consensus 17 ~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~-----------------~~~~~TGD 78 (149)
++|+ |++++.++++|+++++++|.|+.|||+++|+. +.|||++++.+++.|.. ++||+|||
T Consensus 392 s~G~-~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGD 470 (631)
T PRK07769 392 SAGK-VGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGD 470 (631)
T ss_pred eCCC-cCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccc
Confidence 6788 99999999999778999999999999999999 99999999999888742 48999999
Q ss_pred eEEEcCCCeEEEE--------------ChHHHHHHHhc-CCCccc--EEEEeeec-------------------CCCCCe
Q psy4966 79 LAYRLPDGTHFII--------------SPCELESIFRQ-HPDVED--VAVIGIPH-------------------DVFGEL 122 (149)
Q Consensus 79 ~~~~~~~G~~~i~--------------~~~eIE~~l~~-~~~V~~--~~v~~~~~-------------------~~~g~~ 122 (149)
+|+++ +|+|+|+ +|.|||++|.+ ||.|.+ ++|+++++ +.+|+.
T Consensus 471 lg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~ 549 (631)
T PRK07769 471 YGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQ 549 (631)
T ss_pred cccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCcc
Confidence 99995 9999997 99999999986 899998 99999998 568899
Q ss_pred EEEEEEeCCC-CCCCHHHHHHHhhcc
Q psy4966 123 PAAVVVPKPN-SSVTAEEVKQFVEFP 147 (149)
Q Consensus 123 ~~a~v~~~~~-~~~~~~~l~~~l~~~ 147 (149)
++++|++.++ ...+.++|.++|++.
T Consensus 550 ~~a~v~~~~~~~~~~~~~l~~~~~~~ 575 (631)
T PRK07769 550 LVIVAERAPGAHKLDPQPIADDIRAA 575 (631)
T ss_pred EEEEEEecCccccccHHHHHHHHHHH
Confidence 9999998876 346777888877753
No 13
>PRK07529 AMP-binding domain protein; Validated
Probab=99.94 E-value=3e-26 Score=187.15 Aligned_cols=144 Identities=29% Similarity=0.470 Sum_probs=125.4
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEE--cCCCC---ccCCCCCeeEEEEEcCC-CccccCCchhh
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKII--DPVTS---VQLPDGKTGELCLKGDV-FLGYRNKVEAT 64 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~--d~~~g---~~~~~g~~Gel~v~~~~-~~gY~~~~~~~ 64 (149)
++..||+||.+. ...+++|. |+|++.++++ | ++| +++++|+.|||+++|+. +.||++++. +
T Consensus 361 l~~~YG~TE~~~~~~~~~~~~~~~~~svG~-~~p~~~v~i~~~d-~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~-~ 437 (632)
T PRK07529 361 IVEGYGLTEATCVSSVNPPDGERRIGSVGL-RLPYQRVRVVILD-DAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAH-N 437 (632)
T ss_pred EeeeecccccCcccccCCccccccCCCccc-ccCCceEEEEEcC-CCCcccccCCCCCceEEEEECCCccccccCCcc-c
Confidence 467899999863 23456788 9999999885 5 556 78999999999999999 999998764 4
Q ss_pred hcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 65 KEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 65 ~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
...|..++||+|||+|++|++|+++|. +|.|||++|.+||+|.+++|++.+++..|+.++++|++.
T Consensus 438 ~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~ 517 (632)
T PRK07529 438 KGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLK 517 (632)
T ss_pred cccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEc
Confidence 555557899999999999999999996 899999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHhhcc
Q psy4966 131 PNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 131 ~~~~~~~~~l~~~l~~~ 147 (149)
++...+.++|+++|+++
T Consensus 518 ~~~~~~~~~l~~~~~~~ 534 (632)
T PRK07529 518 PGASATEAELLAFARDH 534 (632)
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 88788888999988765
No 14
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.94 E-value=3.9e-26 Score=180.65 Aligned_cols=145 Identities=28% Similarity=0.517 Sum_probs=129.2
Q ss_pred CeeeeccCCcccc------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSKQ------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~~------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||.+.. ...++|. |+|++.++++| +++++++.|+.|||+++|+. +.||+++++.++..
T Consensus 279 v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~-~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~ 356 (488)
T PRK09088 279 MVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGI-PTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARA 356 (488)
T ss_pred eeeeecccccccccccCCCcccccccCCcccc-CCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhh
Confidence 3578999998531 3456887 99999999999 78999999999999999999 99999999999988
Q ss_pred cCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC
Q psy4966 68 LDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS 133 (149)
Q Consensus 68 ~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~ 133 (149)
+..++||+|||+++++++|+++|. +|.+||++|+.++.|.+++|++++++..|+..++++++.++.
T Consensus 357 ~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~ 436 (488)
T PRK09088 357 FTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGA 436 (488)
T ss_pred hcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCC
Confidence 877899999999999999999986 899999999999999999999999988888888999988766
Q ss_pred CCCHHHHHHHhhcc
Q psy4966 134 SVTAEEVKQFVEFP 147 (149)
Q Consensus 134 ~~~~~~l~~~l~~~ 147 (149)
..+.+++.++|++.
T Consensus 437 ~~~~~~l~~~~~~~ 450 (488)
T PRK09088 437 PLDLERIRSHLSTR 450 (488)
T ss_pred CCCHHHHHHHHHhh
Confidence 66788888888764
No 15
>PLN02246 4-coumarate--CoA ligase
Probab=99.94 E-value=3.6e-26 Score=183.02 Aligned_cols=145 Identities=39% Similarity=0.679 Sum_probs=129.9
Q ss_pred eeeeccCCcccc--------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhc
Q psy4966 2 FLVVGLVGKSKQ--------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKE 66 (149)
Q Consensus 2 ~~~~g~~e~~~~--------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~ 66 (149)
+..||+||.+.. ...++|+ |+++++++++|++++++++.|+.|||+++|+. +.||+++++.+..
T Consensus 328 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~ 406 (537)
T PLN02246 328 GQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGT-VVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATAN 406 (537)
T ss_pred eccccccccCcccccccccCCCCccccCCcccc-ccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccccCCchhhhh
Confidence 467999998632 2346788 99999999999778899999999999999999 9999999999999
Q ss_pred ccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCC
Q psy4966 67 MLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPN 132 (149)
Q Consensus 67 ~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~ 132 (149)
.+..++||+|||+++++++|++++. +|.+||+.|.++|+|.+++|++.++...|+.++++++..++
T Consensus 407 ~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 486 (537)
T PLN02246 407 TIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNG 486 (537)
T ss_pred cccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCC
Confidence 8877899999999999999999996 89999999999999999999999999889999999998877
Q ss_pred CCCCHHHHHHHhhcc
Q psy4966 133 SSVTAEEVKQFVEFP 147 (149)
Q Consensus 133 ~~~~~~~l~~~l~~~ 147 (149)
...+.++|+++|+++
T Consensus 487 ~~~~~~~l~~~l~~~ 501 (537)
T PLN02246 487 SEITEDEIKQFVAKQ 501 (537)
T ss_pred CCCCHHHHHHHHHhh
Confidence 667788899988764
No 16
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.94 E-value=4.4e-26 Score=180.30 Aligned_cols=144 Identities=33% Similarity=0.493 Sum_probs=129.0
Q ss_pred CeeeeccCCccc-----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSK-----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~-----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||++. ....++|+ |++++.++|+| ++++.++.|+.|||+++|+. +.||+++++.+...+
T Consensus 291 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-p~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 368 (496)
T PRK06839 291 FGQGFGMTETSPTVFMLSEEDARRKVGSIGK-PVLFCDYELID-ENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETI 368 (496)
T ss_pred eEeeccCCCCCcceEecccccccccCCCCcc-cCCCceEEEEC-CCcCCCCCCCceEEEEECCCcchhhcCChHHHHHHH
Confidence 356899999863 22456888 99999999999 77788999999999999999 999999999998877
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
.+|||+|||+++++++|++++. +|.+||++|.++|+|.+++++++++..+|+.++++|+++++..
T Consensus 369 -~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 447 (496)
T PRK06839 369 -QDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSV 447 (496)
T ss_pred -cCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCC
Confidence 5899999999999999999886 8999999999999999999999999999999999999988777
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+.++|+++|++.
T Consensus 448 ~~~~~l~~~~~~~ 460 (496)
T PRK06839 448 LIEKDVIEHCRLF 460 (496)
T ss_pred CCHHHHHHHHHhh
Confidence 8888899888764
No 17
>PRK09274 peptide synthase; Provisional
Probab=99.94 E-value=2.6e-26 Score=184.28 Aligned_cols=144 Identities=23% Similarity=0.359 Sum_probs=118.5
Q ss_pred CeeeeccCCcccc-------------------cccCcCccccCCceEEEEcCC--------CCccCCCCCeeEEEEEcCC
Q psy4966 1 MFLVVGLVGKSKQ-------------------KATLTGKHFQEHNAIKIIDPV--------TSVQLPDGKTGELCLKGDV 53 (149)
Q Consensus 1 ~~~~~g~~e~~~~-------------------~~~~~g~~p~~~~~~~i~d~~--------~g~~~~~g~~Gel~v~~~~ 53 (149)
++..||+||.+.. ...++|+ |+|+++++|+|+. ++++++.|+.|||+++|+.
T Consensus 318 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~ 396 (552)
T PRK09274 318 ILTPYGATEALPISSIESREILFATRAATDNGAGICVGR-PVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPM 396 (552)
T ss_pred EEccccccccceeEeecchhhhccccccccCCCCcccCc-cCCCceEEEEeccccccccccccccCCCCCeeEEEEecCc
Confidence 3578999997531 1125677 9999999999952 4678999999999999999
Q ss_pred -CccccCCchhhhcccC--CCC--eEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEee
Q psy4966 54 -FLGYRNKVEATKEMLD--DDG--WLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGI 114 (149)
Q Consensus 54 -~~gY~~~~~~~~~~~~--~~~--~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~ 114 (149)
+.|||++++.+...|. .++ ||+|||+|++|++|+++|+ +|.|||++|.+||+|.+++|+++
T Consensus 397 ~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~ 476 (552)
T PRK09274 397 VTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRSALVGV 476 (552)
T ss_pred ccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCcccceeEEEEe
Confidence 9999999999887653 355 9999999999999999997 89999999999999999999999
Q ss_pred ecCCCCCeEEEEEEeCCCCCCCHHHHHHHhhc
Q psy4966 115 PHDVFGELPAAVVVPKPNSSVTAEEVKQFVEF 146 (149)
Q Consensus 115 ~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~~ 146 (149)
++.. ++.++++|++.++...+.++|.+.|++
T Consensus 477 ~~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~~ 507 (552)
T PRK09274 477 GVPG-AQRPVLCVELEPGVACSKSALYQELRA 507 (552)
T ss_pred CCCC-CceEEEEEEccCccccchHHHhhhhHH
Confidence 8764 677888988887766665555555543
No 18
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.94 E-value=3.4e-26 Score=183.61 Aligned_cols=146 Identities=40% Similarity=0.689 Sum_probs=129.8
Q ss_pred CeeeeccCCcccc--------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhh
Q psy4966 1 MFLVVGLVGKSKQ--------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATK 65 (149)
Q Consensus 1 ~~~~~g~~e~~~~--------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~ 65 (149)
++..||+||.+.. ...++|. |+|+++++++|+++++++|+|+.|||+++|+. +.||++++..++
T Consensus 332 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~ 410 (546)
T PLN02330 332 VQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGF-ILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYNNKEETD 410 (546)
T ss_pred EEecccccccccceecCCCccccccccccCcccc-ccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhccCccchh
Confidence 4678999997521 1236787 99999999999778899999999999999999 999999999999
Q ss_pred cccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 66 EMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 66 ~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
..++.++||+|||+++++++|+++++ +|.+||++|.++++|.+++|+++++...|+.++++|++.+
T Consensus 411 ~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~ 490 (546)
T PLN02330 411 RTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVINP 490 (546)
T ss_pred hhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEECC
Confidence 88878899999999999999999997 8999999999999999999999999999999999999887
Q ss_pred CCCCCHHHHHHHhhcc
Q psy4966 132 NSSVTAEEVKQFVEFP 147 (149)
Q Consensus 132 ~~~~~~~~l~~~l~~~ 147 (149)
+...+.++|++++++.
T Consensus 491 ~~~~~~~~l~~~~~~~ 506 (546)
T PLN02330 491 KAKESEEDILNFVAAN 506 (546)
T ss_pred CCCCCHHHHHHHHHHh
Confidence 6667778888888764
No 19
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.94 E-value=1.6e-26 Score=189.56 Aligned_cols=125 Identities=30% Similarity=0.494 Sum_probs=107.2
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEEcC-CCC-ccCCCCCeeEEEEEcCC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDP-VTS-VQLPDGKTGELCLKGDV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~-~~g-~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||++. ...+++|+ |+|+++++|+|. ++| ..++++..|||+++|+. |.|||++|+.|++.
T Consensus 411 l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~ 489 (660)
T PLN02861 411 LSQGYGLTESCGGCFTSIANVFSMVGTVGV-PMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEV 489 (660)
T ss_pred eeEecchhhhhhceeecccccCCCCCCccC-ccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhh
Confidence 467899999853 12467888 999999999983 334 34456678999999999 99999999999999
Q ss_pred cCCCCeEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 68 LDDDGWLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 68 ~~~~~~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
| .+|||+|||+|++|+||+++|+ +|.|||++|.+||.|.+|+|++.+ .++.++|+|++.
T Consensus 490 f-~dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~~~~A~vv~~ 563 (660)
T PLN02861 490 L-IDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FESFLVAVVVPD 563 (660)
T ss_pred h-hccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---CcceeEEEEEcC
Confidence 9 5899999999999999999997 899999999999999999999976 346789999875
No 20
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.94 E-value=4.5e-26 Score=185.90 Aligned_cols=145 Identities=17% Similarity=0.148 Sum_probs=122.0
Q ss_pred eeeeccCCccc-------------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcC---C-CccccCCchhh
Q psy4966 2 FLVVGLVGKSK-------------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGD---V-FLGYRNKVEAT 64 (149)
Q Consensus 2 ~~~~g~~e~~~-------------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~---~-~~gY~~~~~~~ 64 (149)
+..||+||++. ...+++|+ |+|+++++|+|+++|++++.|+.|||+++|| . +.|||++++.+
T Consensus 383 ~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~-p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~ 461 (628)
T TIGR02316 383 IDNYWQTETGWPVLAIMPGLDLKPVKLGSPGL-PMYGYHLRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARF 461 (628)
T ss_pred EecccccccCceeecCCCCCCcCCCCCCCccc-CcCCceEEEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHH
Confidence 56899999862 12356788 9999999999955899999999999999998 4 79999999877
Q ss_pred hccc---CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEE
Q psy4966 65 KEML---DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVV 127 (149)
Q Consensus 65 ~~~~---~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v 127 (149)
...+ ..++||+|||+|++|++|+++|+ +|.|||++|.+||+|.+|+|++++++..|+.+++||
T Consensus 462 ~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~v 541 (628)
T TIGR02316 462 LKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFA 541 (628)
T ss_pred HHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEE
Confidence 6654 24679999999999999999997 999999999999999999999999999999999999
Q ss_pred EeCCCCCC--------CHHHHHHHhhcc
Q psy4966 128 VPKPNSSV--------TAEEVKQFVEFP 147 (149)
Q Consensus 128 ~~~~~~~~--------~~~~l~~~l~~~ 147 (149)
+++++... ..++|+++|++.
T Consensus 542 v~~~~~~~~~~~~~~~~~~~i~~~~~~~ 569 (628)
T TIGR02316 542 ILKESDSAGDAHDPHAVETGMMDCVVRQ 569 (628)
T ss_pred EEcCCcccccccchHHHHHHHHHHHHHh
Confidence 98765432 235677776654
No 21
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.94 E-value=5.4e-26 Score=180.95 Aligned_cols=142 Identities=18% Similarity=0.168 Sum_probs=115.1
Q ss_pred eeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCC--CeeEEEEEcCC---CccccCCchhhhc
Q psy4966 2 FLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDG--KTGELCLKGDV---FLGYRNKVEATKE 66 (149)
Q Consensus 2 ~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g--~~Gel~v~~~~---~~gY~~~~~~~~~ 66 (149)
+..||+||.+. ...+++|+ |+++++++|+| ++|++++.| +.|||+++|+. +.|||+++ .++.
T Consensus 267 ~~~YG~TE~~~~~~~~~~~~~~~~~~~G~-p~~~~~~~ivd-~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~~~ 343 (499)
T PLN03051 267 IEYCGGTELASGYISSTLLQPQAPGAFST-ASLGTRFVLLN-DNGVPYPDDQPCVGEVALAPPMLGASDRLLNAD-HDKV 343 (499)
T ss_pred EeeeccccccceeecccccCCCCCccccC-CCCCceEEEEC-CCCCCCCCCCCcceEEEEecCcCCCCccccCCc-ccce
Confidence 57899999742 12357888 99999999999 889999988 47999999996 47999765 3433
Q ss_pred ccCC--------CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhc-CCCcccEEEEeeecCCCC-Ce
Q psy4966 67 MLDD--------DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQ-HPDVEDVAVIGIPHDVFG-EL 122 (149)
Q Consensus 67 ~~~~--------~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~-~~~V~~~~v~~~~~~~~g-~~ 122 (149)
.+++ .+||+|||+|++|+||+|+|+ +|.|||++|.+ ||+|.+++|++++++.+| +.
T Consensus 344 ~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~ 423 (499)
T PLN03051 344 YYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPEL 423 (499)
T ss_pred eeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceE
Confidence 3321 127899999999999999997 89999999986 999999999999999999 68
Q ss_pred EEEEE---EeCCCC-CCCHHHHHHHhhc
Q psy4966 123 PAAVV---VPKPNS-SVTAEEVKQFVEF 146 (149)
Q Consensus 123 ~~a~v---~~~~~~-~~~~~~l~~~l~~ 146 (149)
++|+| +++++. ..+.++|+++|++
T Consensus 424 ~~a~v~~~v~~~~~~~~~~~~l~~~~~~ 451 (499)
T PLN03051 424 LVIFLVLGEEKKGFDQARPEALQKKFQE 451 (499)
T ss_pred EEEEEEcceecccccccchHHHHHHHHH
Confidence 88998 776654 4566777777653
No 22
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.94 E-value=5.4e-26 Score=180.94 Aligned_cols=145 Identities=32% Similarity=0.524 Sum_probs=130.0
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEc---CC-CccccCCchhhhc
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKG---DV-FLGYRNKVEATKE 66 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~---~~-~~gY~~~~~~~~~ 66 (149)
++..||+||++.. ...++|. |+++++++++| +++++++.|+.|||+++| +. +.|||++++.+++
T Consensus 315 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~ 392 (517)
T PRK08008 315 LLTSYGMTETIVGIIGDRPGDKRRWPSIGR-PGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAK 392 (517)
T ss_pred EEeeccccccccccccCCccccccCCcccc-CCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhh
Confidence 3678999998531 1346887 99999999999 889999999999999998 46 9999999999999
Q ss_pred ccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCC
Q psy4966 67 MLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPN 132 (149)
Q Consensus 67 ~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~ 132 (149)
.|..++||+|||++++|++|+++++ +|.+||++|.+++.|.+++|++.+++.+++.+.++|+++++
T Consensus 393 ~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~ 472 (517)
T PRK08008 393 VLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEG 472 (517)
T ss_pred cccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCC
Confidence 9988999999999999999999996 89999999999999999999999999888999999999887
Q ss_pred CCCCHHHHHHHhhcc
Q psy4966 133 SSVTAEEVKQFVEFP 147 (149)
Q Consensus 133 ~~~~~~~l~~~l~~~ 147 (149)
...+.++|.++|++.
T Consensus 473 ~~~~~~~l~~~~~~~ 487 (517)
T PRK08008 473 ETLSEEEFFAFCEQN 487 (517)
T ss_pred CCCCHHHHHHHHHhh
Confidence 777888899888764
No 23
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.94 E-value=1.9e-26 Score=188.81 Aligned_cols=127 Identities=30% Similarity=0.492 Sum_probs=108.1
Q ss_pred CeeeeccCCcccc---------cccCcCccccCCceEEEEcCCCCc---cCCCCCeeEEEEEcCC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTSV---QLPDGKTGELCLKGDV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g~---~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||++.. ..+++|+ |+|+++++|+|.+++. ...++..|||+++|+. |.|||++++.|+..
T Consensus 404 ~~~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~ 482 (651)
T PLN02736 404 VLEGYGMTETSCVISGMDEGDNLSGHVGS-PNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREV 482 (651)
T ss_pred eEEEechHHhchheeccCCCCCCCCccCC-ccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhh
Confidence 4678999998632 3457888 9999999999843332 2234457999999999 99999999999999
Q ss_pred cCCCCeEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 68 LDDDGWLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 68 ~~~~~~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
|..+|||+|||+|++|+||+++|+ +|.|||++|.+||.|.+|+|++. .+++.++|+|++++
T Consensus 483 ~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~ 558 (651)
T PLN02736 483 IDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDP 558 (651)
T ss_pred hccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCH
Confidence 977899999999999999999997 89999999999999999999982 35788999999865
No 24
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.94 E-value=8.2e-26 Score=181.41 Aligned_cols=141 Identities=28% Similarity=0.515 Sum_probs=125.0
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||++. ....++|+ |+++++++++| +++++++.|+.|||+++|+. +.||++++.. . .
T Consensus 351 l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~-~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~- 424 (549)
T PRK07788 351 LYNLYGSTEVAFATIATPEDLAEAPGTVGR-PPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I- 424 (549)
T ss_pred ceeccCcchhchhhccChhhhhhcCCCccc-CCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcc--c-c-
Confidence 467899999753 12346788 99999999999 88999999999999999999 9999998865 2 2
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.++||+|||++++|++|+++|. +|.|||++|.++|+|.+++|++.+++.+|+.++++|++.++...
T Consensus 425 ~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~ 504 (549)
T PRK07788 425 IDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAAL 504 (549)
T ss_pred cCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCC
Confidence 4789999999999999999996 89999999999999999999999999999999999999887778
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.++|+++|++.
T Consensus 505 ~~~~l~~~~~~~ 516 (549)
T PRK07788 505 DEDAIKDYVRDN 516 (549)
T ss_pred CHHHHHHHHHHh
Confidence 889999998864
No 25
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.94 E-value=5.3e-26 Score=188.35 Aligned_cols=127 Identities=22% Similarity=0.265 Sum_probs=107.7
Q ss_pred CeeeeccCCccc---------ccccCcCcccc-CCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSK---------QKATLTGKHFQ-EHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~---------~~~~~~g~~p~-~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||++. ...+++|+ |+ |+++++|+|++++........|||+++|+. |.|||++|+.|++.|+
T Consensus 489 i~~gYGlTEt~~~~~~~~~~~~~~gsvG~-p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~ 567 (746)
T PTZ00342 489 YYQGYGLTETTGPIFVQHADDNNTESIGG-PISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFT 567 (746)
T ss_pred EEEeeccCcccceeeeccCCCCCcccccC-cCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcC
Confidence 357899999853 23467888 87 999999998655444445567999999999 9999999999999998
Q ss_pred CCCeEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
.+|||+|||+|++|++|+++|+ +|.+||++|.+||.|.+|+|++.... ..++|+|+++.
T Consensus 568 ~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~---~~~~Alvv~d~ 641 (746)
T PTZ00342 568 EDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDDSM---DGPLAIISVDK 641 (746)
T ss_pred cCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccCCc---cccEEEEECCH
Confidence 8999999999999999999997 89999999999999999999986322 34888888653
No 26
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.94 E-value=2.8e-26 Score=173.66 Aligned_cols=134 Identities=26% Similarity=0.521 Sum_probs=123.4
Q ss_pred cccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEE
Q psy4966 12 KQKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFI 90 (149)
Q Consensus 12 ~~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i 90 (149)
.....+-|++-.|.-+++|+| ++|+++++|++|+|..+||+ ++|||..|+.++..|+.+|||+|||+.++|++|++.+
T Consensus 354 E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V 432 (542)
T COG1021 354 EIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVV 432 (542)
T ss_pred HheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEE
Confidence 345677899334899999999 99999999999999999999 9999999999999999999999999999999999999
Q ss_pred E--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHHHHHHhhcc
Q psy4966 91 I--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 91 ~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
. ..+|||+.|.+||.|.++++++.+|+..|++.|||++.++. ..+..+|+++|.++
T Consensus 433 ~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~-~~~~~qlr~~L~~~ 502 (542)
T COG1021 433 EGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEP-PLRAAQLRRFLRER 502 (542)
T ss_pred EeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCC-CCCHHHHHHHHHHc
Confidence 7 79999999999999999999999999999999999999865 48889999998764
No 27
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.94 E-value=1.3e-25 Score=181.01 Aligned_cols=123 Identities=29% Similarity=0.525 Sum_probs=110.6
Q ss_pred CcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE----
Q psy4966 17 LTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII---- 91 (149)
Q Consensus 17 ~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~---- 91 (149)
++|+ |+|++++++++ ++ +|+.|||+++|+. +.|||++++.++..+..+|||+|||+|++|++|+++|+
T Consensus 365 ~vG~-p~~~~~v~i~~-~~-----~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~ 437 (563)
T PLN02860 365 CVGK-PAPHVELKIGL-DE-----SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSN 437 (563)
T ss_pred ccCC-ccCCcEEEEec-CC-----CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeeccc
Confidence 5677 99999999999 43 5889999999999 99999999999998878899999999999999999997
Q ss_pred ----------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC--------------CCCHHHHHHHhhc
Q psy4966 92 ----------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS--------------SVTAEEVKQFVEF 146 (149)
Q Consensus 92 ----------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~--------------~~~~~~l~~~l~~ 146 (149)
+|.|||++|.+||+|.+++|++.++...|+.++++|++.++. ..+.+.|++++++
T Consensus 438 d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 516 (563)
T PLN02860 438 DRIKTGGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCRE 516 (563)
T ss_pred ceeEECCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhh
Confidence 899999999999999999999999999999999999987652 3556778888865
No 28
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.94 E-value=2.6e-25 Score=178.62 Aligned_cols=144 Identities=26% Similarity=0.389 Sum_probs=128.5
Q ss_pred CeeeeccCCcccc--------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcC---C-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ--------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGD---V-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~--------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~---~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||++.. ..+++|. |+++++++|+| +++++++.|..|||+++|+ . +.||+++++.+...|
T Consensus 320 v~~~YG~tE~~~~~~~~~~~~~~~~vG~-~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~ 397 (542)
T PRK06155 320 LLDGYGSTETNFVIAVTHGSQRPGSMGR-LAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW 397 (542)
T ss_pred EEeeecccccCccccCCCCCCCCCCcCc-cCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh
Confidence 4678999998642 2345777 99999999999 7899999999999999997 6 999999999998887
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
.++||+|||+++++++|+++|. +|.+||++|.++++|.+++|++++++..++.+.+++++..+..
T Consensus 398 -~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~ 476 (542)
T PRK06155 398 -RNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTA 476 (542)
T ss_pred -cCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCC
Confidence 5899999999999999999986 8999999999999999999999999888889999999888777
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+.++++++|++.
T Consensus 477 ~~~~~~~~~~~~~ 489 (542)
T PRK06155 477 LEPVALVRHCEPR 489 (542)
T ss_pred CCHHHHHHHHHhh
Confidence 8888898888764
No 29
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.93 E-value=1.5e-25 Score=180.82 Aligned_cols=144 Identities=28% Similarity=0.402 Sum_probs=124.8
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEc--CC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKG--DV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~--~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||.+. ...+++|+ |+|+++++++| +++.++++|+.|||++++ +. +.|||++++.+...
T Consensus 351 i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~ 428 (570)
T PRK04319 351 IHDNWWMTETGGIMIANYPAMDIKPGSMGK-PLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESY 428 (570)
T ss_pred eEeceeecccCCEEEecCCCCCCCCCcCcC-CCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhh
Confidence 356899999863 23456888 99999999999 788889999999999997 67 99999999999998
Q ss_pred cCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC
Q psy4966 68 LDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS 133 (149)
Q Consensus 68 ~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~ 133 (149)
|. ++||+|||+++++++|+++|+ +|.|||++|.+||.|.+++|++.+++.+|+.+++++++.++.
T Consensus 429 ~~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~ 507 (570)
T PRK04319 429 FA-GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGY 507 (570)
T ss_pred hc-CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCC
Confidence 85 889999999999999999986 899999999999999999999999999999999999988765
Q ss_pred CCCH---HHHHHHhhcc
Q psy4966 134 SVTA---EEVKQFVEFP 147 (149)
Q Consensus 134 ~~~~---~~l~~~l~~~ 147 (149)
..+. ++|+++|++.
T Consensus 508 ~~~~~~~~~l~~~~~~~ 524 (570)
T PRK04319 508 EPSEELKEEIRGFVKKG 524 (570)
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 4432 4677776653
No 30
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.93 E-value=2.7e-25 Score=176.10 Aligned_cols=144 Identities=30% Similarity=0.505 Sum_probs=129.1
Q ss_pred CeeeeccCCcccc-----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ-----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~-----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.+.. ...++|+ |+|+++++++| +++..++.|..|||+++|+. +.||+++++.++..|
T Consensus 293 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~ 370 (497)
T PRK06145 293 YIDAYGLTETCSGDTLMEAGREIEKIGSTGR-ALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAF 370 (497)
T ss_pred eEEeecCcccCCcceeccCccccccCCCccc-CCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHH
Confidence 3678999998641 3356788 99999999999 78899999999999999999 999999999999888
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
.++||+|||+++++++|+++++ +|.+||+.|.++++|.+++|++.+++..|+.+++++++.+...
T Consensus 371 -~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 449 (497)
T PRK06145 371 -YGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGAT 449 (497)
T ss_pred -hCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCC
Confidence 5889999999999999999996 8999999999999999999999999988999999999887666
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+.++|.++|++.
T Consensus 450 ~~~~~l~~~~~~~ 462 (497)
T PRK06145 450 LTLEALDRHCRQR 462 (497)
T ss_pred CCHHHHHHHHHHh
Confidence 7788888888765
No 31
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.93 E-value=3.2e-25 Score=177.20 Aligned_cols=144 Identities=25% Similarity=0.479 Sum_probs=127.3
Q ss_pred CeeeeccCCcccc----------cccCcCcccc-CCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQ-EHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~-~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.... ...++|+ |+ ++..++++| ++|+++++|+.|||+++|+. +.||+++++.+...|
T Consensus 327 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~ 404 (527)
T TIGR02275 327 LQQVFGMAEGLVNYTRLDDPAEIIFTTQGR-PMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAF 404 (527)
T ss_pred EEeeeccCccCccccCCCCccccccccCCC-CCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhhc
Confidence 4678999996422 1245787 88 589999999 88999999999999999999 999999999999999
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
..++||+|||+++++++|++++. +|.+||++|.+||+|.+++|++.++...++.++++++++++ .
T Consensus 405 ~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~-~ 483 (527)
T TIGR02275 405 DAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDP-A 483 (527)
T ss_pred CcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCC-C
Confidence 88899999999999999999986 89999999999999999999999999989999999998765 4
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+..+|+++|++.
T Consensus 484 ~~~~~l~~~l~~~ 496 (527)
T TIGR02275 484 LKAAQLRRFLRER 496 (527)
T ss_pred CCHHHHHHHHHhC
Confidence 7788999999763
No 32
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.93 E-value=3.3e-25 Score=177.48 Aligned_cols=146 Identities=33% Similarity=0.476 Sum_probs=126.8
Q ss_pred CeeeeccCCcccc---------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC-
Q psy4966 1 MFLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD- 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~- 69 (149)
++..||+||.+.. ...++|. |+++++++++|+++++.++.|..|||+++|+. +.||+++++.+++.|.
T Consensus 333 ~~~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~ 411 (546)
T PRK08314 333 YVEGYGLTETMAQTHSNPPDRPKLQCLGI-PTFGVDARVIDPETLEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIE 411 (546)
T ss_pred EEecccccccccceecCCCcCCCCCccCc-ccCCeEEEEEeCCCCcCCCCCCceEEEEECCchhccccCChhHhhhhhhh
Confidence 4678999998632 2346777 99999999999778999999999999999999 9999999999888773
Q ss_pred --CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC
Q psy4966 70 --DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS 133 (149)
Q Consensus 70 --~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~ 133 (149)
+++||+|||+++++++|++++. +|.|||++|.++++|.+++|++.++...++.++++++++++.
T Consensus 412 ~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~ 491 (546)
T PRK08314 412 IDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEA 491 (546)
T ss_pred cCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCC
Confidence 3469999999999999999986 899999999999999999999999998899999999987653
Q ss_pred --CCCHHHHHHHhhcc
Q psy4966 134 --SVTAEEVKQFVEFP 147 (149)
Q Consensus 134 --~~~~~~l~~~l~~~ 147 (149)
..+.++++++|++.
T Consensus 492 ~~~~~~~~l~~~~~~~ 507 (546)
T PRK08314 492 RGKTTEEEIIAWAREH 507 (546)
T ss_pred CCCCCHHHHHHHHHHh
Confidence 35568888888764
No 33
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.93 E-value=2.8e-25 Score=177.81 Aligned_cols=146 Identities=25% Similarity=0.404 Sum_probs=125.1
Q ss_pred CeeeeccCCccccc------------ccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSKQK------------ATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~~~------------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||++... ..+.|..+.+++.++++|++++++++.|+.|||+++|++ +.||+++++.++..
T Consensus 322 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~ 401 (540)
T PRK06164 322 LTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDATARA 401 (540)
T ss_pred eecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCchhhhhc
Confidence 35789999986321 123455234899999999888999999999999999999 99999999999999
Q ss_pred cCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC
Q psy4966 68 LDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS 133 (149)
Q Consensus 68 ~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~ 133 (149)
|..++||+|||+|+++++|++++. +|.+||++|.++++|.+++|++++. ..++.+++++++.++.
T Consensus 402 ~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~-~~~~~~~~~vv~~~~~ 480 (540)
T PRK06164 402 LTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR-DGKTVPVAFVIPTDGA 480 (540)
T ss_pred ccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC-CCceeEEEEEEeCCCC
Confidence 988899999999999999999886 8999999999999999999999874 3457788999988777
Q ss_pred CCCHHHHHHHhhcc
Q psy4966 134 SVTAEEVKQFVEFP 147 (149)
Q Consensus 134 ~~~~~~l~~~l~~~ 147 (149)
..+.+++.++|+++
T Consensus 481 ~~~~~~l~~~~~~~ 494 (540)
T PRK06164 481 SPDEAGLMAACREA 494 (540)
T ss_pred CCCHHHHHHHHHhh
Confidence 78888999888874
No 34
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.93 E-value=1.2e-25 Score=182.86 Aligned_cols=127 Identities=29% Similarity=0.477 Sum_probs=108.0
Q ss_pred CcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC------------------CCCeEEcC
Q psy4966 17 LTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD------------------DDGWLHTG 77 (149)
Q Consensus 17 ~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~------------------~~~~~~TG 77 (149)
++|+ |+|+++++|+|+++|+++|.|+.|||+++|+. +.|||++++.|++.|. .++||+||
T Consensus 403 ~~G~-~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TG 481 (612)
T PRK12476 403 SCGQ-VARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTG 481 (612)
T ss_pred eCCC-cCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecc
Confidence 6788 99999999999444999999999999999999 9999999999988874 13599999
Q ss_pred ceEEEcCCCeEEEE--------------ChHHHHHHHhc-CCCccc--EEEEeeecCCCCCeEEEEEEeCCCC-CCCHHH
Q psy4966 78 DLAYRLPDGTHFII--------------SPCELESIFRQ-HPDVED--VAVIGIPHDVFGELPAAVVVPKPNS-SVTAEE 139 (149)
Q Consensus 78 D~~~~~~~G~~~i~--------------~~~eIE~~l~~-~~~V~~--~~v~~~~~~~~g~~~~a~v~~~~~~-~~~~~~ 139 (149)
|+|+++ +|+|+|+ +|.|||++|.+ ||.|.+ +++++++++. ++++++++++.++. ..+.++
T Consensus 482 Dlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~~ 559 (612)
T PRK12476 482 DLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRADPAP 559 (612)
T ss_pred ccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcccccHHH
Confidence 999985 9999997 99999999985 899999 7778888887 88899999987654 256666
Q ss_pred HHHHhhc
Q psy4966 140 VKQFVEF 146 (149)
Q Consensus 140 l~~~l~~ 146 (149)
|.++|++
T Consensus 560 l~~~~~~ 566 (612)
T PRK12476 560 AIDAIRA 566 (612)
T ss_pred HHHHHHH
Confidence 6666554
No 35
>PRK08315 AMP-binding domain protein; Validated
Probab=99.93 E-value=3.5e-25 Score=177.75 Aligned_cols=145 Identities=37% Similarity=0.674 Sum_probs=128.9
Q ss_pred eeeeccCCcccc------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 2 FLVVGLVGKSKQ------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 2 ~~~~g~~e~~~~------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
+..||+||++.. ...++|+ |+|++.++++|++++++++.|+.|||+++|+. +.||++++..++..|
T Consensus 345 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~ 423 (559)
T PRK08315 345 TIAYGMTETSPVSTQTRTDDPLEKRVTTVGR-ALPHLEVKIVDPETGETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAI 423 (559)
T ss_pred eEEEcccccccceeecCcccchhhccCCCCc-cCCCcEEEEEcCccCCcCCCCCceEEEEECchhhhhhcCChhHHhhcC
Confidence 568999998642 2346787 99999999999665999999999999999999 999999999999888
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
..++||+|||+++++++|+++|+ ++.|||++|..+++|.+++|++++++..++.++++|+..++..
T Consensus 424 ~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 503 (559)
T PRK08315 424 DADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGAT 503 (559)
T ss_pred CCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCC
Confidence 77899999999999999999986 8999999999999999999999999888888999999877766
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+.+++++++++.
T Consensus 504 ~~~~~l~~~l~~~ 516 (559)
T PRK08315 504 LTEEDVRDFCRGK 516 (559)
T ss_pred CCHHHHHHHHHhh
Confidence 7888888888764
No 36
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.93 E-value=2.7e-25 Score=178.11 Aligned_cols=142 Identities=25% Similarity=0.446 Sum_probs=126.8
Q ss_pred CeeeeccCCcccc----------cccCcCcccc-CCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQ-EHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~-~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.... ...++|+ |+ |++.++++| ++++++++|+.|||+++|+. +.||+++++.+...|
T Consensus 328 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~ 405 (536)
T PRK10946 328 LQQVFGMAEGLVNYTRLDDSDERIFTTQGR-PMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAF 405 (536)
T ss_pred EEEeecccccceeeecCCCccccccccCCc-ccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccchhhc
Confidence 3678999996422 2356788 87 899999999 88999999999999999999 999999999999999
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
..++||+|||++++|++|++++. +|.+||+.|.++++|.++++++.++...|+.++++++.+++
T Consensus 406 ~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~-- 483 (536)
T PRK10946 406 DANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP-- 483 (536)
T ss_pred ccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC--
Confidence 88899999999999999999996 89999999999999999999999999889999999998764
Q ss_pred CCHHHHHHHhhc
Q psy4966 135 VTAEEVKQFVEF 146 (149)
Q Consensus 135 ~~~~~l~~~l~~ 146 (149)
.+.+++++++++
T Consensus 484 ~~~~~l~~~~~~ 495 (536)
T PRK10946 484 LKAVQLRRFLRE 495 (536)
T ss_pred CCHHHHHHHHHh
Confidence 778889888876
No 37
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.93 E-value=3.3e-25 Score=178.53 Aligned_cols=144 Identities=36% Similarity=0.574 Sum_probs=126.2
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||.+.. ...++|+ |++++.++|+| +++.++++|+.|||+++|+. +.|||++++.+.+.|.
T Consensus 361 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~~~~v~ivd-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~ 438 (562)
T PRK12492 361 IVEGYGLTETSPVASTNPYGELARLGTVGI-PVPGTALKVID-DDGNELPLGERGELCIKGPQVMKGYWQQPEATAEALD 438 (562)
T ss_pred eeeccCccccCceeeecCCcccccCCccce-ecCCCEEEEEC-CCCCCCCCCCceEEEEeCCccccccccCchhhhhccc
Confidence 3578999997532 2356787 99999999999 78899999999999999999 9999999999999887
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.++||+|||+++++++|+++|. +|.+||+.|.+|+.|.++++++.++...|+.++++++..+. ..
T Consensus 439 ~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~-~~ 517 (562)
T PRK12492 439 AEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDP-GL 517 (562)
T ss_pred CCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCC-CC
Confidence 7899999999999999999996 89999999999999999999999988888989998887643 45
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.+++++++++.
T Consensus 518 ~~~~i~~~~~~~ 529 (562)
T PRK12492 518 SVEELKAYCKEN 529 (562)
T ss_pred CHHHHHHHHHHh
Confidence 677888887754
No 38
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.93 E-value=2.2e-25 Score=178.34 Aligned_cols=144 Identities=34% Similarity=0.573 Sum_probs=125.2
Q ss_pred CeeeeccCCccccc--------------ccCcCccc--cCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchh
Q psy4966 1 MFLVVGLVGKSKQK--------------ATLTGKHF--QEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEA 63 (149)
Q Consensus 1 ~~~~~g~~e~~~~~--------------~~~~g~~p--~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~ 63 (149)
++..||+||++... ..++|. + .+++.++++| ++++++++|+.|||+++|+. +.||+++++.
T Consensus 323 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~-~g~~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~ 400 (534)
T PRK05852 323 VVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGL-VGRSTGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTI 400 (534)
T ss_pred hhhccCccccchhhhcCCccccccccCccccccc-CCCCCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCccc
Confidence 35689999975311 112333 3 6899999999 78899999999999999999 9999999999
Q ss_pred hhcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEe
Q psy4966 64 TKEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVP 129 (149)
Q Consensus 64 ~~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~ 129 (149)
++..| .++||+|||++++|+||++++. +|.+||++|..+|+|.+++|++.++..+|+.++++|+.
T Consensus 401 t~~~~-~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~ 479 (534)
T PRK05852 401 TAANF-TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVP 479 (534)
T ss_pred chhhh-cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEE
Confidence 99888 5789999999999999999996 89999999999999999999999999899999999998
Q ss_pred CCCCCCCHHHHHHHhhcc
Q psy4966 130 KPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 130 ~~~~~~~~~~l~~~l~~~ 147 (149)
++....+.++|.++|+++
T Consensus 480 ~~~~~~~~~~i~~~~~~~ 497 (534)
T PRK05852 480 RESAPPTAEELVQFCRER 497 (534)
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 776667888899888764
No 39
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.93 E-value=3.5e-25 Score=178.37 Aligned_cols=142 Identities=34% Similarity=0.497 Sum_probs=126.1
Q ss_pred eeccCCcccc----------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhc
Q psy4966 4 VVGLVGKSKQ----------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKE 66 (149)
Q Consensus 4 ~~g~~e~~~~----------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~ 66 (149)
.||+||++.. ...++|. |+|+++++++|++++++++.|+.|||+++|+. +.||+++++.++.
T Consensus 359 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~ 437 (567)
T PRK06178 359 AWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGL-PVPGTEFKICDFETGELLPLGAEGEIVVRTPSLLKGYWNKPEATAE 437 (567)
T ss_pred ccccccccccceeccccccCccccccCCccccc-ccCCcEEEEEcCCCCCcCCCCCceEEEEECCcccccccCChhhhhh
Confidence 6999997521 1234687 99999999999878999999999999999999 9999999999988
Q ss_pred ccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCC
Q psy4966 67 MLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPN 132 (149)
Q Consensus 67 ~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~ 132 (149)
.| .+|||+|||+++++++|+++|+ +|.|||++|..+++|.++++++.++...|+.+++++++.++
T Consensus 438 ~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~ 516 (567)
T PRK06178 438 AL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPG 516 (567)
T ss_pred cc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCC
Confidence 87 5789999999999999999986 89999999999999999999999998888999999998877
Q ss_pred CCCCHHHHHHHhhcc
Q psy4966 133 SSVTAEEVKQFVEFP 147 (149)
Q Consensus 133 ~~~~~~~l~~~l~~~ 147 (149)
...+.++|++++++.
T Consensus 517 ~~~~~~~l~~~~~~~ 531 (567)
T PRK06178 517 ADLTAAALQAWCREN 531 (567)
T ss_pred CcCCHHHHHHHHHhc
Confidence 677888899888764
No 40
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.93 E-value=5.4e-25 Score=176.50 Aligned_cols=141 Identities=32% Similarity=0.562 Sum_probs=123.0
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||.+.. ...++|+ |++++.++++| +++++++.|+.|||+++|+. +.||+ +..+.. +
T Consensus 340 i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~- 413 (537)
T PRK13382 340 IYNNYNATEAGMIATATPADLRAAPDTAGR-PAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDGYT--SGSTKD-F- 413 (537)
T ss_pred EEecccccccCcceecChhHhccCCCCccc-cCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccCcc--ccchhh-c-
Confidence 3678999998632 2346888 99999999999 78999999999999999999 99998 444444 3
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.++||+|||+++++++|+++|. +|.|||+.|.++|+|.+++|++.++...|+.++++|++.++...
T Consensus 414 ~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~ 493 (537)
T PRK13382 414 HDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASA 493 (537)
T ss_pred cCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCC
Confidence 3789999999999999999997 89999999999999999999999999889999999998877677
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.++++++|++.
T Consensus 494 ~~~~l~~~l~~~ 505 (537)
T PRK13382 494 TPETLKQHVRDN 505 (537)
T ss_pred CHHHHHHHHHHh
Confidence 788888888764
No 41
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.93 E-value=1e-25 Score=181.51 Aligned_cols=115 Identities=33% Similarity=0.496 Sum_probs=103.8
Q ss_pred CeeeeccCCccc---------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCC
Q psy4966 1 MFLVVGLVGKSK---------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDD 70 (149)
Q Consensus 1 ~~~~~g~~e~~~---------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~ 70 (149)
|+.+||+||+++ ...+++|. |+|+++++|.| .|||+||||+ |.|||++|++|++.|+.
T Consensus 380 i~eGYGlTEts~~~~v~~~~~~~~gtvG~-p~p~~evKI~d-----------~GEilVRG~~Vm~GYyk~pe~Taeaf~~ 447 (613)
T COG1022 380 ILEGYGLTETSAVVSVNPPDRFVLGTVGK-PLPGIEVKIAD-----------DGEILVRGPNVMKGYYKNPEATAEAFTE 447 (613)
T ss_pred eEEEecccccccceEEccccCcccCCcCC-cCCCceEEEcc-----------CceEEEecchhcchhcCChHHHhhhccc
Confidence 578999999875 44678898 99999999988 3999999999 99999999999999999
Q ss_pred CCeEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 71 DGWLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 71 ~~~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
||||+|||+|.+|++|+|.|+ .|+.||+.+.++|-|++++|++ .+... +.|+|+++.
T Consensus 448 DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~k~~---~~AlIvp~~ 519 (613)
T COG1022 448 DGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DDKKF---LVALIVPDF 519 (613)
T ss_pred cCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cCCcc---eEEEEeCCH
Confidence 999999999999999999997 9999999999999999999999 44443 888888754
No 42
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.93 E-value=7.1e-25 Score=176.01 Aligned_cols=142 Identities=30% Similarity=0.522 Sum_probs=125.5
Q ss_pred CeeeeccCCccccc-----------ccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQK-----------ATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~~-----------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.+... ..++|+ |+|+++++|+| +++++++.|+.|||+++|+. +.||+++++.++..
T Consensus 340 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~- 416 (547)
T PRK13295 340 IVSAWGMTENGAVTLTKLDDPDERASTTDGC-PLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGTD- 416 (547)
T ss_pred eEEeccCCCCCCeeeccCCCcchhccCcccc-ccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCcccccccCCccccccC-
Confidence 46789999985321 245677 99999999999 78899999999999999999 99999999988775
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
.+|||+|||+++++++|++++. +|.+||++|.++++|.+++|+++++...|+.+++++++.++..
T Consensus 417 -~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 495 (547)
T PRK13295 417 -ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQS 495 (547)
T ss_pred -CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCC
Confidence 4789999999999999999986 8999999999999999999999999998999999999887766
Q ss_pred CCHHHHHHHhhc
Q psy4966 135 VTAEEVKQFVEF 146 (149)
Q Consensus 135 ~~~~~l~~~l~~ 146 (149)
.+.+++.+++++
T Consensus 496 ~~~~~l~~~~~~ 507 (547)
T PRK13295 496 LDFEEMVEFLKA 507 (547)
T ss_pred CCHHHHHHHHHh
Confidence 777888888874
No 43
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.93 E-value=8.7e-25 Score=173.34 Aligned_cols=146 Identities=32% Similarity=0.478 Sum_probs=130.1
Q ss_pred CeeeeccCCcccc---------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCC
Q psy4966 1 MFLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDD 70 (149)
Q Consensus 1 ~~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~ 70 (149)
++..||+||.+.. ...++|. |+++++++++||+++++++.|+.|||+++|+. +.||+++++.+++.|..
T Consensus 297 ~~~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~ 375 (504)
T PRK07514 297 ILERYGMTETNMNTSNPYDGERRAGTVGF-PLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRA 375 (504)
T ss_pred ceeecccccccccccCCccccccCccccc-CCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhccc
Confidence 3578999997532 2345777 99999999999888999999999999999999 99999999999999977
Q ss_pred CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCC
Q psy4966 71 DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVT 136 (149)
Q Consensus 71 ~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~ 136 (149)
++||+|||+++++++|++++. +|.+||++|..+++|.+++++++++...|+.++++++..++...+
T Consensus 376 ~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (504)
T PRK07514 376 DGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALD 455 (504)
T ss_pred CCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCC
Confidence 899999999999999999886 899999999999999999999999988889999999988776777
Q ss_pred HHHHHHHhhcc
Q psy4966 137 AEEVKQFVEFP 147 (149)
Q Consensus 137 ~~~l~~~l~~~ 147 (149)
.+++++.+++.
T Consensus 456 ~~~l~~~~~~~ 466 (504)
T PRK07514 456 EAAILAALKGR 466 (504)
T ss_pred HHHHHHHHHhh
Confidence 88888888764
No 44
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.93 E-value=4.8e-25 Score=174.49 Aligned_cols=140 Identities=26% Similarity=0.529 Sum_probs=122.3
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||.+. ....++|+ |++++.++|+| ++|.++++|+.|||+++|+. +.||++++..+.+.+
T Consensus 282 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~- 358 (487)
T PRK07638 282 LYEFYGASELSFVTALVDEESERRPNSVGR-PFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELN- 358 (487)
T ss_pred EEEEecCCccCceEEecccccCCCCCCCCc-ccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhc-
Confidence 367899999863 23456888 99999999999 88999999999999999999 999999998877655
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.++||+|||++++|++|++++. +|.|||++|.++|+|.+++|++.+++..|+.++++++. ..
T Consensus 359 ~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~----~~ 434 (487)
T PRK07638 359 ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKG----SA 434 (487)
T ss_pred cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEEC----CC
Confidence 6899999999999999999986 89999999999999999999999999889988888864 35
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.++++++|++.
T Consensus 435 ~~~~l~~~~~~~ 446 (487)
T PRK07638 435 TKQQLKSFCLQR 446 (487)
T ss_pred CHHHHHHHHHHH
Confidence 667788877654
No 45
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.93 E-value=4.2e-25 Score=176.38 Aligned_cols=143 Identities=33% Similarity=0.555 Sum_probs=127.1
Q ss_pred eeeeccCCcccc-----------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchh
Q psy4966 2 FLVVGLVGKSKQ-----------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEA 63 (149)
Q Consensus 2 ~~~~g~~e~~~~-----------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~ 63 (149)
+..||+||.+.. ...++|. |++++.++++| +++++++.|+.|||+++|+. +.||+++++.
T Consensus 309 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~ 386 (528)
T PRK07470 309 VQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGF-ERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEA 386 (528)
T ss_pred HHhCCCcccCCceeecchhhccccccccceeeccCc-ccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHH
Confidence 467999997532 1246777 99999999999 78999999999999999999 9999999999
Q ss_pred hhcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEe
Q psy4966 64 TKEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVP 129 (149)
Q Consensus 64 ~~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~ 129 (149)
+++.| .++||+|||+++++++|++++. +|.+||++|.+++.|.+++|++.+++..|+.++++++.
T Consensus 387 ~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~ 465 (528)
T PRK07470 387 NAKAF-RDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVA 465 (528)
T ss_pred HHhhh-cCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEE
Confidence 98887 5899999999999999999986 89999999999999999999999999888889999988
Q ss_pred CCCCCCCHHHHHHHhhcc
Q psy4966 130 KPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 130 ~~~~~~~~~~l~~~l~~~ 147 (149)
.++...+.+.++++|++.
T Consensus 466 ~~~~~~~~~~~~~~l~~~ 483 (528)
T PRK07470 466 RDGAPVDEAELLAWLDGK 483 (528)
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 877667888898888764
No 46
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.93 E-value=1.1e-24 Score=174.70 Aligned_cols=143 Identities=29% Similarity=0.453 Sum_probs=126.1
Q ss_pred CeeeeccCCcccc-------cccCcCccccCCceEEEEcCCCCccCCCCC------------eeEEEE-EcCC-CccccC
Q psy4966 1 MFLVVGLVGKSKQ-------KATLTGKHFQEHNAIKIIDPVTSVQLPDGK------------TGELCL-KGDV-FLGYRN 59 (149)
Q Consensus 1 ~~~~~g~~e~~~~-------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~------------~Gel~v-~~~~-~~gY~~ 59 (149)
++..||+||.+.. ...++|. |+++ +++++++++.+++.|. .|||++ +|+. +.||++
T Consensus 293 l~~~YG~TE~~~~~~~~~~~~~~~~g~-~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~ 369 (529)
T PRK07867 293 VVDGFGSTEGGVAITRTPDTPPGALGP-LPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYN 369 (529)
T ss_pred EEEeecccccccccccCCCCCCCCcCC-CCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccC
Confidence 3678999997532 2345777 8898 6788867788899888 999999 9999 999999
Q ss_pred CchhhhcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEE
Q psy4966 60 KVEATKEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAA 125 (149)
Q Consensus 60 ~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a 125 (149)
+++.+...| .++||+|||+++++++|+++|. +|.|||++|.+||+|.+++|++.+++..|+++++
T Consensus 370 ~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a 448 (529)
T PRK07867 370 DPEADAERM-RGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMA 448 (529)
T ss_pred ChHhhhhhh-cCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEE
Confidence 999998888 5899999999999999999986 8999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHhhcc
Q psy4966 126 VVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 126 ~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
++++.++...+.++++++|+++
T Consensus 449 ~vv~~~~~~~~~~~l~~~~~~~ 470 (529)
T PRK07867 449 ALVLAPGAKFDPDAFAEFLAAQ 470 (529)
T ss_pred EEEECCCCCCCHHHHHHHHHhh
Confidence 9999888778999999998763
No 47
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.93 E-value=5.2e-25 Score=181.70 Aligned_cols=142 Identities=18% Similarity=0.303 Sum_probs=120.3
Q ss_pred CeeeeccCCcccc---------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCC
Q psy4966 1 MFLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDD 70 (149)
Q Consensus 1 ~~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~ 70 (149)
++..||+||.+.. ...++|+ |+++++++++| ++++++++|+.|||+++|+. +.|||++++.+ +..
T Consensus 289 ~~~~YG~tE~~~~~~~~~~~~~~~~~iG~-p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~---~~~ 363 (705)
T PRK06060 289 ILDGIGSTEVGQTFVSNRVDEWRLGTLGR-VLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSP---VAN 363 (705)
T ss_pred eEeeeeccccCceEEeccCCCCCcCcccc-cCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhhhCCCccc---ccC
Confidence 4678999998531 2346788 99999999999 78999999999999999999 99999999865 335
Q ss_pred CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCC
Q psy4966 71 DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVT 136 (149)
Q Consensus 71 ~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~ 136 (149)
++||+|||+++++++|+++|+ +|.|||++|.+|+.|.+++|+++++...++.++++++...+...+
T Consensus 364 ~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~ 443 (705)
T PRK06060 364 EGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATID 443 (705)
T ss_pred CCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcC
Confidence 799999999999999999986 899999999999999999999999988888999999987654444
Q ss_pred H---HHHHHHhhcc
Q psy4966 137 A---EEVKQFVEFP 147 (149)
Q Consensus 137 ~---~~l~~~l~~~ 147 (149)
. ++++++|++.
T Consensus 444 ~~~~~~i~~~l~~~ 457 (705)
T PRK06060 444 GSVMRDLHRGLLNR 457 (705)
T ss_pred hHHHHHHHHHHHHh
Confidence 3 3566666543
No 48
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.93 E-value=1.3e-24 Score=174.14 Aligned_cols=142 Identities=31% Similarity=0.558 Sum_probs=125.0
Q ss_pred CeeeeccCCccccc-----------ccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQK-----------ATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~~-----------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.+... ..++|+ |+|++.+++++ +++++++.|+.|||+++|+. +.||+++++.+..
T Consensus 338 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~-- 413 (538)
T TIGR03208 338 IVSAWGMTENGAVTVTEPDDALEKASTTDGR-PLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRPHLNST-- 413 (538)
T ss_pred EEeeeccCcCCCccccCcccchhhccCcccc-cCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCcccccc--
Confidence 46789999975321 235677 99999999999 78999999999999999999 9999999987653
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
..++||+|||++++|++|+++++ +|.|||++|.+|++|.+++|++.++...|+.+++++++..+..
T Consensus 414 ~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 493 (538)
T TIGR03208 414 DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGCT 493 (538)
T ss_pred cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCCCC
Confidence 46899999999999999999986 8999999999999999999999999888999999999987777
Q ss_pred CCHHHHHHHhhc
Q psy4966 135 VTAEEVKQFVEF 146 (149)
Q Consensus 135 ~~~~~l~~~l~~ 146 (149)
.+..++.+++++
T Consensus 494 ~~~~~l~~~~~~ 505 (538)
T TIGR03208 494 LDFAAMVAFLKA 505 (538)
T ss_pred CCHHHHHHHHHh
Confidence 888889888874
No 49
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.93 E-value=1.5e-24 Score=173.93 Aligned_cols=145 Identities=36% Similarity=0.631 Sum_probs=128.7
Q ss_pred CeeeeccCCcccc------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSKQ------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~~------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||.+.. ...++|+ |+|++.++++| +++++++.|+.|||+++|+. +.||++++..+...
T Consensus 346 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~ 423 (558)
T PRK12583 346 VQIAYGMTETSPVSLQTTAADDLERRVETVGR-TQPHLEVKVVD-PDGATVPRGEIGELCTRGYSVMKGYWNNPEATAES 423 (558)
T ss_pred eeccccccccccceeccCcccccccccCCCCc-cCCCCeEEEEC-CCCCCCCCCCeeEEEEEeCccchhhcCChHHHHhh
Confidence 3567999998642 2356787 99999999999 55899999999999999999 99999999999888
Q ss_pred cCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC
Q psy4966 68 LDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS 133 (149)
Q Consensus 68 ~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~ 133 (149)
|..++||+|||+++++++|++++. +|.+||+.|..+++|.+++|+++++...++.+++++++.++.
T Consensus 424 ~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 503 (558)
T PRK12583 424 IDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGH 503 (558)
T ss_pred cCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCC
Confidence 867899999999999999999996 899999999999999999999999998889999999988766
Q ss_pred CCCHHHHHHHhhcc
Q psy4966 134 SVTAEEVKQFVEFP 147 (149)
Q Consensus 134 ~~~~~~l~~~l~~~ 147 (149)
..+.++|+++|++.
T Consensus 504 ~~~~~~i~~~~~~~ 517 (558)
T PRK12583 504 AASEEELREFCKAR 517 (558)
T ss_pred CCCHHHHHHHHHhh
Confidence 67788888888764
No 50
>KOG1256|consensus
Probab=99.93 E-value=1.7e-25 Score=179.58 Aligned_cols=129 Identities=35% Similarity=0.595 Sum_probs=116.5
Q ss_pred CeeeeccCCccc---------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCC
Q psy4966 1 MFLVVGLVGKSK---------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDD 70 (149)
Q Consensus 1 ~~~~~g~~e~~~---------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~ 70 (149)
++..||+||+++ ...+++|. |+|+++++++|+++.+--+.+..|||+|||+. |.|||++|++|++.++.
T Consensus 447 v~eGYGlTEts~g~~~~~~~d~~lgsvG~-p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ide 525 (691)
T KOG1256|consen 447 VLEGYGLTETSAGTTLTLPGDNVLGSVGP-PVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDE 525 (691)
T ss_pred eeecccccccCCceEeccCCCCCCCCcCC-cccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhcc
Confidence 467899999983 34677898 99999999999888888888889999999999 99999999999999999
Q ss_pred CCeEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC
Q psy4966 71 DGWLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS 133 (149)
Q Consensus 71 ~~~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~ 133 (149)
+||++|||+|+++++|.|.|. .|+.||++..+.+.|.+.+|++-....+ ++|+|+++...
T Consensus 526 DGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~~~---LvaiVvpd~e~ 600 (691)
T KOG1256|consen 526 DGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLRSF---LVAIVVPDPEV 600 (691)
T ss_pred ccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcchhc---EEEEEecChhh
Confidence 999999999999999999997 8999999999999999999998766655 99999986543
No 51
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.93 E-value=1.1e-24 Score=177.54 Aligned_cols=146 Identities=22% Similarity=0.255 Sum_probs=121.7
Q ss_pred CeeeeccCCccc-------------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcC---C-CccccCCchh
Q psy4966 1 MFLVVGLVGKSK-------------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGD---V-FLGYRNKVEA 63 (149)
Q Consensus 1 ~~~~~g~~e~~~-------------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~---~-~~gY~~~~~~ 63 (149)
++..||+||++. ...+++|+ |+|+++++++|+++|+++++|+.|||+++|| . +.+||++++.
T Consensus 383 v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~-p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~ 461 (629)
T PRK10524 383 VIDNYWQTETGWPILAIARGVEDRPTRLGSPGV-PMYGYNVKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDR 461 (629)
T ss_pred eEeccccccccchhhcCCCCcccCcCCCCCccc-CcCCceEEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHH
Confidence 357899999851 12356788 9999999999944899999999999999997 4 8899999987
Q ss_pred hhcccC---CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEE
Q psy4966 64 TKEMLD---DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAV 126 (149)
Q Consensus 64 ~~~~~~---~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~ 126 (149)
+...+. .++||+|||++++|++|+++|+ +|.|||++|.+||+|.+++|++++++..|+.++++
T Consensus 462 ~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~ 541 (629)
T PRK10524 462 FVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAF 541 (629)
T ss_pred HHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEE
Confidence 765442 4689999999999999999997 89999999999999999999999999999999999
Q ss_pred EEeCCCCCCC--------HHHHHHHhhcc
Q psy4966 127 VVPKPNSSVT--------AEEVKQFVEFP 147 (149)
Q Consensus 127 v~~~~~~~~~--------~~~l~~~l~~~ 147 (149)
++++++...+ .++|++++++.
T Consensus 542 vv~~~~~~~~~~~~~~~~~~~i~~~~~~~ 570 (629)
T PRK10524 542 VVPKDSDSLADREARLALEKEIMALVDSQ 570 (629)
T ss_pred EEECCCCccccccchHHHHHHHHHHHHhh
Confidence 9988654332 34566666653
No 52
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.93 E-value=1.1e-24 Score=175.25 Aligned_cols=144 Identities=31% Similarity=0.483 Sum_probs=126.5
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||.+.. ...++|. |++++.++++| +++++++.|+.|||+++|+. +.||+++++.+...|.
T Consensus 355 ~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~-p~~g~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~ 432 (557)
T PRK07059 355 ITEGYGLSETSPVATCNPVDATEFSGTIGL-PLPSTEVSIRD-DDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMT 432 (557)
T ss_pred eeeccccccccchhhcCCCCCCCcCCcccC-ccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcc
Confidence 4678999998642 2356788 99999999999 88999999999999999999 9999999999998887
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.+|||+|||+++++++|+++++ +|.+||++|..+++|.+++|++.++...|+.++++++... ...
T Consensus 433 ~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~-~~~ 511 (557)
T PRK07059 433 ADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKD-PAL 511 (557)
T ss_pred cCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCC-CCC
Confidence 7899999999999999999986 8999999999999999999999999888898998888654 346
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.++++++|++.
T Consensus 512 ~~~~l~~~~~~~ 523 (557)
T PRK07059 512 TEEDVKAFCKER 523 (557)
T ss_pred CHHHHHHHHHHh
Confidence 677888877654
No 53
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.93 E-value=1.5e-24 Score=172.27 Aligned_cols=143 Identities=26% Similarity=0.346 Sum_probs=122.1
Q ss_pred eeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCC
Q psy4966 2 FLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDD 70 (149)
Q Consensus 2 ~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~ 70 (149)
+..||++|.+. ....++|+ |+++ .++++| ++++++++|+.|||+++|+. +.||+++++.++..+..
T Consensus 299 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~ 375 (501)
T PRK13390 299 YEYYSSTEAHGMTFIDSPDWLAHPGSVGR-SVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHP 375 (501)
T ss_pred eeeecccccCceEEecchhhccCCCCcCC-cccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhcc
Confidence 56899999863 12456788 9999 699999 88999999999999999999 99999999999887743
Q ss_pred --CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 71 --DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 71 --~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
++|++|||++++|++|++++. +|.|||++|.+|++|.++++++++++..|+.+++++++.++..
T Consensus 376 ~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~ 455 (501)
T PRK13390 376 AHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIR 455 (501)
T ss_pred CCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCC
Confidence 679999999999999999996 8999999999999999999999999999999999999876543
Q ss_pred CC---HHHHHHHhhcc
Q psy4966 135 VT---AEEVKQFVEFP 147 (149)
Q Consensus 135 ~~---~~~l~~~l~~~ 147 (149)
.+ .++|.+++++.
T Consensus 456 ~~~~~~~~l~~~~~~~ 471 (501)
T PRK13390 456 GSDELARELIDYTRSR 471 (501)
T ss_pred cchhhHHHHHHHHHHh
Confidence 33 34666666543
No 54
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.93 E-value=1.5e-24 Score=171.19 Aligned_cols=143 Identities=33% Similarity=0.535 Sum_probs=123.8
Q ss_pred CeeeeccCCcccc---------cccCcCccccCCceEEEEcCCCCccCC-CCC-eeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTSVQLP-DGK-TGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g~~~~-~g~-~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||++.. ...++|+ |++++.++|+| +++.+++ .+. .|||+++|+. +.||+++++.++..|
T Consensus 269 ~~~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~g~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~ 346 (471)
T PRK07787 269 PVERYGMTETLITLSTRADGERRPGWVGL-PLAGVETRLVD-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAF 346 (471)
T ss_pred eecccCccccCcceecCCCCcccCCcccc-cCCCcEEEEEC-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcc
Confidence 3678999998642 2346787 99999999999 6788887 344 8999999999 999999999999999
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS 133 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~ 133 (149)
..++||+|||+++++++|++++. +|.+||++|..++.|++++|++.++...++.++++++...
T Consensus 347 ~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~-- 424 (471)
T PRK07787 347 TADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGAD-- 424 (471)
T ss_pred cCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCC--
Confidence 77899999999999999999886 8999999999999999999999999888899999998743
Q ss_pred CCCHHHHHHHhhcc
Q psy4966 134 SVTAEEVKQFVEFP 147 (149)
Q Consensus 134 ~~~~~~l~~~l~~~ 147 (149)
..+.+++.++|++.
T Consensus 425 ~~~~~~l~~~l~~~ 438 (471)
T PRK07787 425 DVAADELIDFVAQQ 438 (471)
T ss_pred CCCHHHHHHHHHhh
Confidence 46778888888764
No 55
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.93 E-value=9.1e-25 Score=179.04 Aligned_cols=142 Identities=17% Similarity=0.179 Sum_probs=117.3
Q ss_pred eeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcC--C-CccccCCchhhh---c
Q psy4966 3 LVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGD--V-FLGYRNKVEATK---E 66 (149)
Q Consensus 3 ~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~--~-~~gY~~~~~~~~---~ 66 (149)
..||+||... ...+++|+ |.++++++++| ++|+++ +|+.|||+++++ . +.|||++++.+. .
T Consensus 416 ~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g~~v~ivd-~~g~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~ 492 (652)
T TIGR01217 416 SISGGTDICSCFAGANPTLPVHIGEIQA-PGLGTAVQSWD-PEGKPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDA 492 (652)
T ss_pred eccCHHHHhccccCCCCCCCCcCCccCC-CcCCCceEEEC-CCCCCC-CCCccEEEEecCCCccccceeCCCccchhHHh
Confidence 4588888531 22356677 99999999999 888888 599999999996 4 899999998553 2
Q ss_pred ccC-CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 67 MLD-DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 67 ~~~-~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
.|. .+|||+|||+|++|+||+++|+ +|.|||++|.+||+|.+++|++++++.+|+.+++||++.+
T Consensus 493 ~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~ 572 (652)
T TIGR01217 493 YFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAP 572 (652)
T ss_pred hhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECC
Confidence 222 2689999999999999999997 8999999999999999999999999999999999999987
Q ss_pred CCCCCH---HHHHHHhhcc
Q psy4966 132 NSSVTA---EEVKQFVEFP 147 (149)
Q Consensus 132 ~~~~~~---~~l~~~l~~~ 147 (149)
+...+. ++|+++|++.
T Consensus 573 ~~~~~~~~~~~l~~~~~~~ 591 (652)
T TIGR01217 573 GATLDDALLDRIKRTIRAG 591 (652)
T ss_pred CCCCCHHHHHHHHHHHHhh
Confidence 765554 4677777653
No 56
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.93 E-value=1.5e-24 Score=174.90 Aligned_cols=145 Identities=33% Similarity=0.578 Sum_probs=127.8
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEEcCCC-CccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVT-SVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~-g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.+. ....++|. |+|++.++++|+++ +.+++.|..|||+++|+. +.||+++++.+...|
T Consensus 364 i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 442 (573)
T PRK05605 364 LVEGYGLTETSPIIVGNPMSDDRRPGYVGV-PFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSF 442 (573)
T ss_pred eecccccchhchhhhcCCcccCCcCCcccc-CCCCCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhcc
Confidence 367899999862 12346787 99999999999655 688999999999999999 999999999999888
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
. ++||+|||+++++++|++++. +|.+||++|..++.|.++++++.++...++.+++++++.++..
T Consensus 443 ~-~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~ 521 (573)
T PRK05605 443 L-DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAA 521 (573)
T ss_pred c-CCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCC
Confidence 4 679999999999999999986 8999999999999999999999999888899999999988777
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+.++|++++++.
T Consensus 522 ~~~~~l~~~~~~~ 534 (573)
T PRK05605 522 LDPEGLRAYCREH 534 (573)
T ss_pred CCHHHHHHHHHHh
Confidence 7888888888764
No 57
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.93 E-value=1.1e-24 Score=174.90 Aligned_cols=140 Identities=22% Similarity=0.257 Sum_probs=111.0
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc-
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML- 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~- 68 (149)
++..||+||.+.. ...++|+ |+++++++++|++++.++++|+.|||+++|+. +.|||++++.+....
T Consensus 328 i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~ 406 (539)
T PRK06334 328 LRQGYGTTECSPVITINTVNSPKHESCVGM-PIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVEL 406 (539)
T ss_pred EEecccccccCceEEeccCCCCCCCCcCce-ecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccceee
Confidence 3578999998631 2245787 99999999999667899999999999999999 999999998654322
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCccc------EEEEeeecCCCCCeEEEEEE
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVED------VAVIGIPHDVFGELPAAVVV 128 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~------~~v~~~~~~~~g~~~~a~v~ 128 (149)
..++||+|||+|++|++|+++|. +|.|||++|.+||+|.+ ++|+++++.. ..++++++
T Consensus 407 ~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~--~~~~~~~~ 484 (539)
T PRK06334 407 GGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEK--VRLCLFTT 484 (539)
T ss_pred CCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCc--eEEEEEEe
Confidence 24689999999999999999997 99999999999999987 6777776432 34445544
Q ss_pred eCCCCCCCHHHHHHHhhcc
Q psy4966 129 PKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 129 ~~~~~~~~~~~l~~~l~~~ 147 (149)
.. .+.++++++|+++
T Consensus 485 ~~----~~~~~~~~~l~~~ 499 (539)
T PRK06334 485 FP----TSISEVNDILKNS 499 (539)
T ss_pred cc----CChHHHHHHHHhc
Confidence 32 3567788888764
No 58
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.93 E-value=6.4e-25 Score=181.12 Aligned_cols=127 Identities=26% Similarity=0.352 Sum_probs=104.7
Q ss_pred CeeeeccCCccc---------ccccCcCccccCCceEEEEcCCCC-ccC--CCCCeeEEEEEcCC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSK---------QKATLTGKHFQEHNAIKIIDPVTS-VQL--PDGKTGELCLKGDV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~---------~~~~~~g~~p~~~~~~~i~d~~~g-~~~--~~g~~Gel~v~~~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||++. ...+++|+ |+|+++++|+|++++ ..+ +++..|||+++|++ |.|||++|+.|++.
T Consensus 448 v~~~YG~TEt~~~~~~~~~~~~~~gsvG~-p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~ 526 (696)
T PLN02387 448 IGQGYGLTETCAGATFSEWDDTSVGRVGP-PLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEV 526 (696)
T ss_pred eeEeechhhcccceeecCcccCCCCccCC-CCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhh
Confidence 467899999863 23467888 999999999995444 222 34457999999999 99999999999998
Q ss_pred cC--CCC--eEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEE
Q psy4966 68 LD--DDG--WLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVV 128 (149)
Q Consensus 68 ~~--~~~--~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~ 128 (149)
|. .+| ||+|||+|++|+||+++|+ +|.|||++|.+||.|.+++|++.+.. ..++|+|+
T Consensus 527 f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv 603 (696)
T PLN02387 527 YKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH---SYCVALVV 603 (696)
T ss_pred hccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEE
Confidence 83 345 9999999999999999997 89999999999999999999986533 34788888
Q ss_pred eCC
Q psy4966 129 PKP 131 (149)
Q Consensus 129 ~~~ 131 (149)
+++
T Consensus 604 ~~~ 606 (696)
T PLN02387 604 PSQ 606 (696)
T ss_pred eCH
Confidence 753
No 59
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=1.1e-24 Score=186.99 Aligned_cols=142 Identities=26% Similarity=0.309 Sum_probs=122.2
Q ss_pred CeeeeccCCcccc-------------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCC
Q psy4966 1 MFLVVGLVGKSKQ-------------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNK 60 (149)
Q Consensus 1 ~~~~~g~~e~~~~-------------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~ 60 (149)
++..||+||++.. ...++|+ |+|+++++++|+++++++|+|+.|||+++|+. +.||+++
T Consensus 926 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~ 1004 (1146)
T PRK08633 926 ILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGM-PLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGD 1004 (1146)
T ss_pred eecccccccCcceEEEecCcccccccccccCCCCCCccc-cCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCC
Confidence 3578999997531 2456888 99999999999888999999999999999999 9999999
Q ss_pred chhhhcccCC---CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCC--CcccEEEEeeecCCCCC
Q psy4966 61 VEATKEMLDD---DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHP--DVEDVAVIGIPHDVFGE 121 (149)
Q Consensus 61 ~~~~~~~~~~---~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~--~V~~~~v~~~~~~~~g~ 121 (149)
++.+++.+.+ ++||+|||++++|+||++++. +|.|||++|.+|+ .+.+++|++++++..|+
T Consensus 1005 ~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~ 1084 (1146)
T PRK08633 1005 PEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGE 1084 (1146)
T ss_pred ccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCc
Confidence 9999888742 389999999999999999996 8999999999998 46789999999999999
Q ss_pred eEEEEEEeCCCCCCCHHHHHHHhhc
Q psy4966 122 LPAAVVVPKPNSSVTAEEVKQFVEF 146 (149)
Q Consensus 122 ~~~a~v~~~~~~~~~~~~l~~~l~~ 146 (149)
.++++++.. ..+.+++++++++
T Consensus 1085 ~~~~~v~~~---~~~~~~l~~~~~~ 1106 (1146)
T PRK08633 1085 KLVVLHTCG---AEDVEELKRAIKE 1106 (1146)
T ss_pred EEEEEEecC---ccCHHHHHHHHHh
Confidence 999988862 3466778877764
No 60
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.92 E-value=2.7e-24 Score=170.64 Aligned_cols=145 Identities=35% Similarity=0.564 Sum_probs=129.4
Q ss_pred CeeeeccCCcccc------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSKQ------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~~------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||++.. ...++|. |+++++++++| +++++++.|+.|||+++|+. +.||++++..+...
T Consensus 310 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~ 387 (513)
T PRK07656 310 VLTGYGLSEASGVTTFNRLDDDRKTVAGTIGT-AIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAA 387 (513)
T ss_pred eEeEEccccCCCceeecCccccccccCCCccc-cCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhh
Confidence 3678999999521 1456887 99999999999 78999999999999999999 99999999999988
Q ss_pred cCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC
Q psy4966 68 LDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS 133 (149)
Q Consensus 68 ~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~ 133 (149)
+..++||+|||+++++++|+++++ ++.+||+.|.++++|.+++|++.++...|+.++++++..++.
T Consensus 388 ~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~ 467 (513)
T PRK07656 388 IDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGA 467 (513)
T ss_pred hccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCC
Confidence 866899999999999999999986 899999999999999999999999988899999999988766
Q ss_pred CCCHHHHHHHhhcc
Q psy4966 134 SVTAEEVKQFVEFP 147 (149)
Q Consensus 134 ~~~~~~l~~~l~~~ 147 (149)
..+.++|.++|++.
T Consensus 468 ~~~~~~l~~~~~~~ 481 (513)
T PRK07656 468 ELTEEELIAYCREH 481 (513)
T ss_pred CCCHHHHHHHHHhh
Confidence 78888898888764
No 61
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.92 E-value=2.2e-24 Score=172.93 Aligned_cols=143 Identities=34% Similarity=0.516 Sum_probs=125.7
Q ss_pred CeeeeccCCccccc-----------ccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQK-----------ATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~~-----------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||++... ..+.|. |++++.++++| +++.+++.|..|||+++|+. +.||+++++.+...+
T Consensus 329 l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 406 (547)
T PRK06087 329 LLSVYGSTESSPHAVVNLDDPLSRFMHTDGY-AAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARAL 406 (547)
T ss_pred EEEEecccccCCccccCCCcchhhcCCcCCc-cCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHh
Confidence 46789999986321 234677 99999999999 88999999999999999999 999999999999988
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC-CC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP-NS 133 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~-~~ 133 (149)
..++||+|||+++++++|+++++ +|.+||++|..+++|.++++++.+++..|++++++++..+ +.
T Consensus 407 ~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 486 (547)
T PRK06087 407 DEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHH 486 (547)
T ss_pred CCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCC
Confidence 77899999999999999999996 8999999999999999999999999999999999999875 44
Q ss_pred CCCHHHHHHHhh
Q psy4966 134 SVTAEEVKQFVE 145 (149)
Q Consensus 134 ~~~~~~l~~~l~ 145 (149)
..+.+++.+++.
T Consensus 487 ~~~~~~~~~~~~ 498 (547)
T PRK06087 487 SLTLEEVVAFFS 498 (547)
T ss_pred CCCHHHHHHHHH
Confidence 556777777764
No 62
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.92 E-value=2.4e-24 Score=171.83 Aligned_cols=143 Identities=35% Similarity=0.618 Sum_probs=127.4
Q ss_pred eeeeccCCccc---------------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhh
Q psy4966 2 FLVVGLVGKSK---------------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATK 65 (149)
Q Consensus 2 ~~~~g~~e~~~---------------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~ 65 (149)
+..||+||.+. ....++|+ |+|++.++++| +++++++.|+.|||+++|+. +.||++++..+.
T Consensus 310 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~-p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~ 387 (524)
T PRK06188 310 AQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGR-PTPGLRVALLD-EDGREVAQGEVGEICVRGPLVMDGYWNRPEETA 387 (524)
T ss_pred hheeCccccCCceeecCchhccccccccCCcccc-ccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchhhhhcCChHHhh
Confidence 56899999842 12346787 99999999999 77999999999999999999 999999999998
Q ss_pred cccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 66 EMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 66 ~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
..| .++||+|||+++++++|++++. +|.+||++|.++++|.+++|++.+++..++.+++++++.+
T Consensus 388 ~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 466 (524)
T PRK06188 388 EAF-RDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRP 466 (524)
T ss_pred hhh-cCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECC
Confidence 888 5899999999999999999986 8999999999999999999999999888999999999887
Q ss_pred CCCCCHHHHHHHhhcc
Q psy4966 132 NSSVTAEEVKQFVEFP 147 (149)
Q Consensus 132 ~~~~~~~~l~~~l~~~ 147 (149)
....+.++|+++|++.
T Consensus 467 ~~~~~~~~l~~~~~~~ 482 (524)
T PRK06188 467 GAAVDAAELQAHVKER 482 (524)
T ss_pred CCCCCHHHHHHHHHHh
Confidence 7677788888888765
No 63
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.92 E-value=1.8e-24 Score=177.12 Aligned_cols=143 Identities=17% Similarity=0.129 Sum_probs=118.0
Q ss_pred eeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcC--C-CccccCCchhhh--c
Q psy4966 2 FLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGD--V-FLGYRNKVEATK--E 66 (149)
Q Consensus 2 ~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~--~-~~gY~~~~~~~~--~ 66 (149)
+..||+||.+. ...+++|+ |+++++++|+| ++|+++ .|+.|||+++++ . +.|||++++.+. .
T Consensus 414 ~~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g~~~~ivd-~~g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~ 490 (655)
T PRK03584 414 ASISGGTDICSCFVGGNPLLPVYRGEIQC-RGLGMAVEAWD-EDGRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRD 490 (655)
T ss_pred EeccChHhhhcccccCCCCCCcCCCccCC-CcCCceeEEEC-CCCCCC-CCCceEEEEccCCCCCcceeeCCCccchHHH
Confidence 45688888642 23456787 99999999999 888888 799999999996 5 899999987543 1
Q ss_pred -ccC-CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 67 -MLD-DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 67 -~~~-~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
.|. .++||+|||++++|+||+++|+ +|.|||++|.+||+|.+|+|++.+++..|+.++++|++.
T Consensus 491 ~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~ 570 (655)
T PRK03584 491 AYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLA 570 (655)
T ss_pred hhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEEC
Confidence 121 2579999999999999999997 899999999999999999999999999999999999998
Q ss_pred CCCCCCH---HHHHHHhhcc
Q psy4966 131 PNSSVTA---EEVKQFVEFP 147 (149)
Q Consensus 131 ~~~~~~~---~~l~~~l~~~ 147 (149)
++...+. ++|+++|++.
T Consensus 571 ~~~~~~~~~~~~l~~~~~~~ 590 (655)
T PRK03584 571 EGVTLDDALRARIRTTIRTN 590 (655)
T ss_pred CCCCCcHHHHHHHHHHHHhh
Confidence 7655553 4677777654
No 64
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.92 E-value=1.4e-24 Score=173.76 Aligned_cols=122 Identities=21% Similarity=0.329 Sum_probs=99.5
Q ss_pred cCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE---
Q psy4966 16 TLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII--- 91 (149)
Q Consensus 16 ~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~--- 91 (149)
.++|+ |+|+++++|+|++.+.+++.|+.|||+++|+. +.|||++++.+ .++||+|||+++++ +|+++|+
T Consensus 345 ~~vG~-p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~ 417 (525)
T PRK05851 345 AVLGN-PIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRA 417 (525)
T ss_pred eeecC-CCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCCccC-----CCCceeccceEEEE-CCEEEEEeec
Confidence 35788 99999999999444467899999999999999 99999998642 47899999999997 7999987
Q ss_pred -----------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHHHHHHhh
Q psy4966 92 -----------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEEVKQFVE 145 (149)
Q Consensus 92 -----------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~ 145 (149)
+|.|||++|.+||+|.+++|++++++.+++.+.++++.... ..+.+.+.++|+
T Consensus 418 dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~ 481 (525)
T PRK05851 418 KELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFR-GPDEAGARSEVV 481 (525)
T ss_pred CCEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEec-CcchHHHHHHHH
Confidence 99999999999999999999999998888887777665321 233344444443
No 65
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.92 E-value=2.8e-24 Score=170.86 Aligned_cols=144 Identities=28% Similarity=0.478 Sum_probs=128.5
Q ss_pred CeeeeccCCccc-----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSK-----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~-----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||++|++. ....++|+ |+++++++|+| +++++++.|+.|||+++|+. +.||+++++.++..|
T Consensus 315 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~ 392 (523)
T PRK08316 315 FYNCYGQTEIAPLATVLGPEEHLRRPGSAGR-PVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF 392 (523)
T ss_pred eeeeecccccCccccccCccccccccCCccc-CCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh
Confidence 367899999864 22356788 99999999999 78999999999999999999 999999999999888
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
.++||+|||+|+++++|++++. +|.+||+.|.++++|.+++|++.+++..++.++++++..++..
T Consensus 393 -~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 471 (523)
T PRK08316 393 -RGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGAT 471 (523)
T ss_pred -hCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCC
Confidence 6899999999999999999986 8999999999999999999999999998999999999987766
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+.+.+.+++++.
T Consensus 472 ~~~~~l~~~~~~~ 484 (523)
T PRK08316 472 VTEDELIAHCRAR 484 (523)
T ss_pred CCHHHHHHHHHHh
Confidence 7778888887653
No 66
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.92 E-value=2.5e-24 Score=173.24 Aligned_cols=145 Identities=34% Similarity=0.517 Sum_probs=128.9
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||.+.. ..+++|. |++++.+++++++++.+++.|..|||+++|+. +.||+++++.+...+
T Consensus 351 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~- 428 (563)
T PRK06710 351 LVEGYGLTESSPVTHSNFLWEKRVPGSIGV-PWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIMKGYWNKPEETAAVL- 428 (563)
T ss_pred EecccccccCccccccCcccccccCCccCC-CCCCCeEEEEECCCCccCCCCCceEEEEecCccchhhhCChHHHhhhc-
Confidence 3578999998642 2345677 99999999999778899999999999999999 999999999998887
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.++||+|||+++++++|++++. +|.+||++|.+++.|.+++|++.++...|+.++++++..++...
T Consensus 429 ~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~ 508 (563)
T PRK06710 429 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTEC 508 (563)
T ss_pred ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCCC
Confidence 5899999999999999999886 89999999999999999999999999889999999998887777
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.++++++++++
T Consensus 509 ~~~~l~~~~~~~ 520 (563)
T PRK06710 509 SEEELNQFARKY 520 (563)
T ss_pred CHHHHHHHHHHh
Confidence 888888888764
No 67
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.92 E-value=3.1e-24 Score=172.54 Aligned_cols=144 Identities=34% Similarity=0.540 Sum_probs=125.1
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||.+.. ...++|. |++++.++++| +++++++.|+.|||+++|+. +.||+++++.+++.|.
T Consensus 357 ~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~~~v~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 434 (560)
T PRK08751 357 LVEAYGLTETSPAACINPLTLKEYNGSIGL-PIPSTDACIKD-DAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMD 434 (560)
T ss_pred EEEeeccccCCCceecccccccccCCCcCc-cCCCceEEEEC-CCCCCCCCCCceEEEEecCccchhhcCChhhhhhccc
Confidence 3678999998632 2345777 99999999999 88999999999999999999 9999999999999887
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.++||+|||+++++++|++++. +|.+||++|..+++|.+++|+++++...|+.+.++++.. +...
T Consensus 435 ~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~-~~~~ 513 (560)
T PRK08751 435 ADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKK-DPAL 513 (560)
T ss_pred cCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcC-CCCC
Confidence 7899999999999999999986 899999999999999999999999988888888877754 4456
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.+++++.+++.
T Consensus 514 ~~~~l~~~~~~~ 525 (560)
T PRK08751 514 TAEDVKAHARAN 525 (560)
T ss_pred CHHHHHHHHHHh
Confidence 777787777654
No 68
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.92 E-value=4.2e-24 Score=169.72 Aligned_cols=145 Identities=22% Similarity=0.365 Sum_probs=126.7
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||... ....++|+ |+|++.+++++ +++++++.|+.|||+++|+. +.|||++++.+...|.
T Consensus 303 ~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~ 380 (515)
T TIGR03098 303 LFLMYGLTEAFRSTYLPPEEVDRRPDSIGK-AIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFR 380 (515)
T ss_pred EeeeeccccccceEecccccccCCCCCcce-ecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhh
Confidence 467899999852 23457888 99999999999 78999999999999999999 9999999988876653
Q ss_pred C-----------CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEE
Q psy4966 70 D-----------DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPA 124 (149)
Q Consensus 70 ~-----------~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~ 124 (149)
. ++||+|||+++++++|++++. +|.+||++|..++.|.+++|++.+++..|+.++
T Consensus 381 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~ 460 (515)
T TIGR03098 381 PLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIV 460 (515)
T ss_pred ccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEE
Confidence 2 348999999999999999986 899999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcc
Q psy4966 125 AVVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 125 a~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
++++.......+.++|+++|++.
T Consensus 461 ~~~~~~~~~~~~~~~l~~~l~~~ 483 (515)
T TIGR03098 461 LVVTPPGGEELDRAALLAECRAR 483 (515)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhh
Confidence 99987766677888888888764
No 69
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.92 E-value=4.2e-24 Score=171.46 Aligned_cols=129 Identities=31% Similarity=0.467 Sum_probs=111.1
Q ss_pred CeeeeccCCcccc--------------cccCcCccccCCceEEEEcCCCCc-cC-----CCCCeeEEEEEcCC-CccccC
Q psy4966 1 MFLVVGLVGKSKQ--------------KATLTGKHFQEHNAIKIIDPVTSV-QL-----PDGKTGELCLKGDV-FLGYRN 59 (149)
Q Consensus 1 ~~~~~g~~e~~~~--------------~~~~~g~~p~~~~~~~i~d~~~g~-~~-----~~g~~Gel~v~~~~-~~gY~~ 59 (149)
++..||+||++.. ..+++|+ |+++++++|+| +++. ++ +.|+.|||+++|+. +.|||+
T Consensus 313 i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~-~~~g~~v~i~d-~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~ 390 (540)
T PRK05857 313 TAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGR-PYPGVDVYLAA-TDGIGPTAPGAGPSASFGTLWIKSPANMLGYWN 390 (540)
T ss_pred eecccCCCcCCceeeecccccccccccccCCcCc-ccCCcEEEEEC-ccccCccccccCCCCCcceEEEeCcchhhhhhC
Confidence 3578999998531 2357888 99999999999 5554 33 45789999999999 999999
Q ss_pred CchhhhcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEE
Q psy4966 60 KVEATKEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAA 125 (149)
Q Consensus 60 ~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a 125 (149)
+++.+.+.| .+|||+|||++++|++|++++. +|.|||++|..||+|.+++|+++++..+++.+++
T Consensus 391 ~~~~t~~~~-~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~ 469 (540)
T PRK05857 391 NPERTAEVL-IDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGL 469 (540)
T ss_pred Cccchhhhc-CCCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEE
Confidence 999999888 5889999999999999999986 9999999999999999999999999888888888
Q ss_pred EEEeCCC
Q psy4966 126 VVVPKPN 132 (149)
Q Consensus 126 ~v~~~~~ 132 (149)
+++..+.
T Consensus 470 ~vv~~~~ 476 (540)
T PRK05857 470 AVVASAE 476 (540)
T ss_pred EEEeCCC
Confidence 8877643
No 70
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.92 E-value=7.2e-24 Score=170.19 Aligned_cols=143 Identities=29% Similarity=0.385 Sum_probs=120.7
Q ss_pred CeeeeccCCcccc-------cccCcCccccCCceEE-----------EEcCCCCccC-CCCCeeEEEEE-cCC-CccccC
Q psy4966 1 MFLVVGLVGKSKQ-------KATLTGKHFQEHNAIK-----------IIDPVTSVQL-PDGKTGELCLK-GDV-FLGYRN 59 (149)
Q Consensus 1 ~~~~~g~~e~~~~-------~~~~~g~~p~~~~~~~-----------i~d~~~g~~~-~~g~~Gel~v~-~~~-~~gY~~ 59 (149)
++..||+||++.. ...++|+ |++++++. ++| ++|+.+ +++..|||+++ |+. +.||++
T Consensus 291 l~~~YG~tE~~~~~~~~~~~~~~~vG~-p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~ 368 (540)
T PRK13388 291 VEDGYGSSEGAVIVVREPGTPPGSIGR-GAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYN 368 (540)
T ss_pred eecccccccccceeecCCCCCCCCCCC-CCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccC
Confidence 3678999998642 2456787 99997653 344 445554 45678999998 998 999999
Q ss_pred CchhhhcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEE
Q psy4966 60 KVEATKEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAA 125 (149)
Q Consensus 60 ~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a 125 (149)
+++.+++.| .+|||+|||++++|++|+++++ +|.|||++|..|++|.+|+|++.+++..|+.+++
T Consensus 369 ~~~~t~~~~-~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~ 447 (540)
T PRK13388 369 NPEATAERM-RHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMA 447 (540)
T ss_pred ChHHHHHHh-hcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEE
Confidence 999999888 5789999999999999999986 8999999999999999999999999988999999
Q ss_pred EEEeCCCCCCCHHHHHHHhhc
Q psy4966 126 VVVPKPNSSVTAEEVKQFVEF 146 (149)
Q Consensus 126 ~v~~~~~~~~~~~~l~~~l~~ 146 (149)
++++.++...+.++++++|++
T Consensus 448 ~v~~~~~~~~~~~~l~~~l~~ 468 (540)
T PRK13388 448 ALVLRDGATFDPDAFAAFLAA 468 (540)
T ss_pred EEEECCCCcCCHHHHHHHHHh
Confidence 999888777888889988865
No 71
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.92 E-value=3.3e-24 Score=176.97 Aligned_cols=125 Identities=30% Similarity=0.452 Sum_probs=103.8
Q ss_pred CeeeeccCCcccc---------cccCcCccccCCceEEEEcCCCC--ccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTS--VQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g--~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||++.. ..+++|+ |+|+++++|+| .++ ...+++..|||+|+|+. +.|||++|+.|++.|
T Consensus 455 l~~~YG~TEt~~~~~~~~~~~~~~~svG~-p~~g~evkI~d-~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f 532 (700)
T PTZ00216 455 VIQGWGLTETVCCGGIQRTGDLEPNAVGQ-LLKGVEMKLLD-TEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVL 532 (700)
T ss_pred HhhccCcccccccccccCCCCCCCCCcCC-cCCCeEEEEee-chhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhc
Confidence 3578999998532 3467888 99999999999 443 23456778999999999 999999999999999
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCccc--EEEEeeecCCCCCeEEEEEEeC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVED--VAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~--~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
..+|||+|||+|++|+||+|+|+ +|+|||++|.+||.|.+ ++|+..++. ..++|+++++
T Consensus 533 ~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~~---~~l~a~vv~~ 608 (700)
T PTZ00216 533 DEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPAR---SYICALVLTD 608 (700)
T ss_pred cccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecCC---ceEEEEEecC
Confidence 88999999999999999999997 89999999999999997 344443332 4588888764
No 72
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.91 E-value=5.6e-24 Score=174.66 Aligned_cols=126 Identities=33% Similarity=0.522 Sum_probs=107.0
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEEcC-CCC-ccCCCCCeeEEEEEcCC-CccccCCchhhhcc
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDP-VTS-VQLPDGKTGELCLKGDV-FLGYRNKVEATKEM 67 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~-~~g-~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~ 67 (149)
++..||+||++. ...+++|+ |+|++++++.+. +.+ .+++.+..|||+++|+. +.|||++|+.|+..
T Consensus 411 i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~ 489 (660)
T PLN02430 411 VVQGYGLTETLGPTTLGFPDEMCMLGTVGA-PAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEV 489 (660)
T ss_pred eeeecchhhhhhceEeeccccCCCCCCccC-CCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhh
Confidence 367899999753 12478898 999999999873 333 45566678999999999 99999999999998
Q ss_pred cCCCCeEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 68 LDDDGWLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 68 ~~~~~~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
| .+|||+|||+|++|++|+++|. +|.+||++|.+||.|.+++|++. ..++.++|+|+++.
T Consensus 490 ~-~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~---~~~~~~~A~vv~~~ 564 (660)
T PLN02430 490 M-KDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGD---SFKSMLVAVVVPNE 564 (660)
T ss_pred h-hccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEec---CCcceEEEEEEcCH
Confidence 8 5899999999999999999997 89999999999999999999983 23567899998764
No 73
>PRK12316 peptide synthase; Provisional
Probab=99.91 E-value=4.8e-24 Score=200.95 Aligned_cols=144 Identities=25% Similarity=0.296 Sum_probs=127.1
Q ss_pred CeeeeccCCccccc--------------ccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhh
Q psy4966 1 MFLVVGLVGKSKQK--------------ATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATK 65 (149)
Q Consensus 1 ~~~~~g~~e~~~~~--------------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~ 65 (149)
++..||+||++... ..++|+ |+++++++|+| ++++++|.|.+|||+|+|+. +.|||++|+.|+
T Consensus 2290 l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~ 2367 (5163)
T PRK12316 2290 LFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGR-ALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTA 2367 (5163)
T ss_pred EEECccchhheeeeeeeecccccccCCCcCCccc-ccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChhhhh
Confidence 36789999986321 135788 99999999999 88999999999999999999 999999999999
Q ss_pred cccCC-------CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEE
Q psy4966 66 EMLDD-------DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPA 124 (149)
Q Consensus 66 ~~~~~-------~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~ 124 (149)
+.|.. ++||+|||+|++++||+|+|+ +|.|||++|.++|+|.+++|++.++. .++.++
T Consensus 2368 ~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~-~~~~l~ 2446 (5163)
T PRK12316 2368 ERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDGA-SGKQLV 2446 (5163)
T ss_pred hhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEecC-CCeEEE
Confidence 98842 359999999999999999997 99999999999999999999998766 678999
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcc
Q psy4966 125 AVVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 125 a~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
|+|+..++...+.++|+++|++.
T Consensus 2447 a~v~~~~~~~~~~~~l~~~l~~~ 2469 (5163)
T PRK12316 2447 AYVVPDDAAEDLLAELRAWLAAR 2469 (5163)
T ss_pred EEEEecCCCccCHHHHHHHHHhh
Confidence 99999887777888999988764
No 74
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.91 E-value=7e-24 Score=185.25 Aligned_cols=129 Identities=20% Similarity=0.250 Sum_probs=112.4
Q ss_pred CeeeeccCCcccc--------------------cccCcCccccCCceEEEEcCCC-CccCCCCCeeEEEEEcCC-Ccccc
Q psy4966 1 MFLVVGLVGKSKQ--------------------KATLTGKHFQEHNAIKIIDPVT-SVQLPDGKTGELCLKGDV-FLGYR 58 (149)
Q Consensus 1 ~~~~~g~~e~~~~--------------------~~~~~g~~p~~~~~~~i~d~~~-g~~~~~g~~Gel~v~~~~-~~gY~ 58 (149)
++..||+||++.. ...++|+ |+++++++|+|+++ ++++|.|..|||+|+|+. +.||+
T Consensus 558 l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~ 636 (1389)
T TIGR03443 558 IVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGK-GMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYL 636 (1389)
T ss_pred EEECccCCccceeEEEEEccccccccchhhcccCcCcCCC-ccCCCEEEEECCccCCCcCCCCCceEEEecccccchhcC
Confidence 3678999998531 1235687 99999999999533 478999999999999999 99999
Q ss_pred CCchhhhcccC----------------------------CCCeEEcCceEEEcCCCeEEEE--------------ChHHH
Q psy4966 59 NKVEATKEMLD----------------------------DDGWLHTGDLAYRLPDGTHFII--------------SPCEL 96 (149)
Q Consensus 59 ~~~~~~~~~~~----------------------------~~~~~~TGD~~~~~~~G~~~i~--------------~~~eI 96 (149)
++|+.|++.|. .++||+|||+|++++||+++|+ +|.||
T Consensus 637 ~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eI 716 (1389)
T TIGR03443 637 GLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELGEI 716 (1389)
T ss_pred CChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHHHH
Confidence 99999998873 2579999999999999999997 99999
Q ss_pred HHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 97 ESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 97 E~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
|++|.+||.|.+++|++.++...++.+++++++.
T Consensus 717 E~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~ 750 (1389)
T TIGR03443 717 DTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQ 750 (1389)
T ss_pred HHHHHhCcchheeEEEEeeCCCCCeEEEEEEecc
Confidence 9999999999999999998888788899999876
No 75
>PRK12467 peptide synthase; Provisional
Probab=99.91 E-value=3e-24 Score=199.77 Aligned_cols=145 Identities=24% Similarity=0.249 Sum_probs=125.9
Q ss_pred CeeeeccCCccccc--------------ccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhh
Q psy4966 1 MFLVVGLVGKSKQK--------------ATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATK 65 (149)
Q Consensus 1 ~~~~~g~~e~~~~~--------------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~ 65 (149)
+++.||+||++... ..++|+ |+++++++|+| ++++++|+|++|||+|+|+. +.||+++|+.|+
T Consensus 3380 l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~ 3457 (3956)
T PRK12467 3380 LTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGR-PVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTA 3457 (3956)
T ss_pred EEeCcccchhEeeeEEEecccccccCCCCCCCcc-ccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcccch
Confidence 36789999986311 146788 99999999999 88999999999999999999 999999999999
Q ss_pred cccCCC-------CeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEE
Q psy4966 66 EMLDDD-------GWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPA 124 (149)
Q Consensus 66 ~~~~~~-------~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~ 124 (149)
+.|..+ +||+|||+|++++||+|+|+ +|.|||++|.++|+|.+++|++.. ...+++++
T Consensus 3458 ~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~-~~~~~~lv 3536 (3956)
T PRK12467 3458 ERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARD-GAGGKQLV 3536 (3956)
T ss_pred hhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEec-CCCCcEEE
Confidence 999654 36999999999999999997 999999999999999999999874 44578999
Q ss_pred EEEEeCCCCCCCHHHHHHHhhccc
Q psy4966 125 AVVVPKPNSSVTAEEVKQFVEFPR 148 (149)
Q Consensus 125 a~v~~~~~~~~~~~~l~~~l~~~~ 148 (149)
++++.........++++++|++..
T Consensus 3537 a~v~~~~~~~~~~~~l~~~l~~~L 3560 (3956)
T PRK12467 3537 AYVVPADPQGDWRETLRDHLAASL 3560 (3956)
T ss_pred EEEeCCCCCcccHHHHHHHHhccC
Confidence 999987665667788988887653
No 76
>PRK12316 peptide synthase; Provisional
Probab=99.91 E-value=5e-24 Score=200.82 Aligned_cols=141 Identities=25% Similarity=0.291 Sum_probs=124.4
Q ss_pred CeeeeccCCccc-----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSK-----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~-----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||++. ....++|+ |+++++++|+| ++++++|.|..|||+|+|+. +.||+++|+.|++.|
T Consensus 799 l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f 876 (5163)
T PRK12316 799 LYNLYGPTEAAIDVTHWTCVEEGGDSVPIGR-PIANLACYILD-ANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERF 876 (5163)
T ss_pred EEeCcCcChheeeeeEEecccccCCCCCCcc-ccCCCEEEEEC-CCCCCCCCCCceEEEecccccChhhCCChhhhhhhC
Confidence 367899999872 12346788 99999999999 88999999999999999999 999999999999988
Q ss_pred C------CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEE
Q psy4966 69 D------DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVV 128 (149)
Q Consensus 69 ~------~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~ 128 (149)
. +++||+|||++++++||+++|+ +|.|||++|.+||+|.+|+|++.+ |+.++|+|+
T Consensus 877 ~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv 952 (5163)
T PRK12316 877 VPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVV 952 (5163)
T ss_pred CCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEE
Confidence 4 2459999999999999999997 999999999999999999999885 678999999
Q ss_pred eCCCCCCCHHHHHHHhhcc
Q psy4966 129 PKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 129 ~~~~~~~~~~~l~~~l~~~ 147 (149)
+.++.....+.++++|++.
T Consensus 953 ~~~~~~~~~~~l~~~l~~~ 971 (5163)
T PRK12316 953 LESEGGDWREALKAHLAAS 971 (5163)
T ss_pred ccCCCCCCHHHHHHHHHhh
Confidence 8876667788899988764
No 77
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.91 E-value=1.6e-23 Score=167.97 Aligned_cols=144 Identities=30% Similarity=0.546 Sum_probs=125.7
Q ss_pred CeeeeccCCcccc-----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ-----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~-----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.+.. ...++|+ |+|++.++++| +++++++.|+.|||+++|+. +.||+++++.++..|
T Consensus 319 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f 396 (542)
T PRK07786 319 ILAAFGQTEMSPVTCMLLGEDAIRKLGSVGK-VIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF 396 (542)
T ss_pred EEeeecccccccceEecCcccccccCCCccc-cCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh
Confidence 3578999998632 2356788 99999999999 88899999999999999999 999999999999888
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC-
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS- 133 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~- 133 (149)
.++||+|||+++++++|+++++ ++.|||++|.+++.|.+++|++.++...++.+++++++..+.
T Consensus 397 -~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 475 (542)
T PRK07786 397 -AGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDA 475 (542)
T ss_pred -hCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCC
Confidence 5899999999999999999886 899999999999999999999998888888899998877543
Q ss_pred CCCHHHHHHHhhcc
Q psy4966 134 SVTAEEVKQFVEFP 147 (149)
Q Consensus 134 ~~~~~~l~~~l~~~ 147 (149)
....+++.++|+++
T Consensus 476 ~~~~~~l~~~l~~~ 489 (542)
T PRK07786 476 ALTLEDLAEFLTDR 489 (542)
T ss_pred CCCHHHHHHHHHhh
Confidence 35677888887764
No 78
>KOG1175|consensus
Probab=99.91 E-value=1.6e-23 Score=168.07 Aligned_cols=141 Identities=29% Similarity=0.354 Sum_probs=120.8
Q ss_pred eeeccCCcc-----------cccccCcCccccCCceEEEEcCCCCccCCCC-CeeEEEEEcC---C-CccccCCchhhhc
Q psy4966 3 LVVGLVGKS-----------KQKATLTGKHFQEHNAIKIIDPVTSVQLPDG-KTGELCLKGD---V-FLGYRNKVEATKE 66 (149)
Q Consensus 3 ~~~g~~e~~-----------~~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g-~~Gel~v~~~---~-~~gY~~~~~~~~~ 66 (149)
..||+||++ +.++++.+. |++++.+.|+| ++|++++.+ ..|+|+++.+ . +++||+|++....
T Consensus 390 e~~~qtEtG~~~i~~~~g~~p~~pg~~~~-p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~ 467 (626)
T KOG1175|consen 390 ETYGQTETGGICITPKPGKLPIKPGSAGK-PFPGYDVQILD-ENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRA 467 (626)
T ss_pred hceeeeccCceeeeccCCCCCcCccccCC-CCCCcceEEEC-CCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhh
Confidence 456777775 356777888 99999999999 799999876 8899999984 4 8999999995555
Q ss_pred ccCC--CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 67 MLDD--DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 67 ~~~~--~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
.+.. .|+|.|||.+++|+||+++|+ ++.|||++|.+||.|.|++|++.+++..||.+.|||+++
T Consensus 468 ~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~ 547 (626)
T KOG1175|consen 468 AYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLK 547 (626)
T ss_pred hhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEc
Confidence 5545 799999999999999999998 999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHhhc
Q psy4966 131 PNSSVTAEEVKQFVEF 146 (149)
Q Consensus 131 ~~~~~~~~~l~~~l~~ 146 (149)
++ ..+.++|.+.|++
T Consensus 548 ~g-~~~~~~L~kel~~ 562 (626)
T KOG1175|consen 548 SG-SHDPEQLTKELVK 562 (626)
T ss_pred CC-CCChHHHHHHHHH
Confidence 98 5555666655544
No 79
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.91 E-value=2.2e-23 Score=165.47 Aligned_cols=143 Identities=27% Similarity=0.447 Sum_probs=122.8
Q ss_pred eeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCC
Q psy4966 2 FLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDD 70 (149)
Q Consensus 2 ~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~ 70 (149)
+..||+||.+. ....++|+ |+ ++.++++| +++++++.|+.|||+++|+. +.||++++..+...+..
T Consensus 291 ~~~yG~tE~~~~~~~~~~~~~~~~~~~G~-~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 367 (502)
T PRK08276 291 HEYYASSEGGGVTVITSEDWLAHPGSVGK-AV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNP 367 (502)
T ss_pred hhhcccccccceeEecCccccccCCCcce-ec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcC
Confidence 46799999865 22346787 88 88999999 77899999999999999999 99999999999999877
Q ss_pred CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCC
Q psy4966 71 DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVT 136 (149)
Q Consensus 71 ~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~ 136 (149)
++||+|||+++++++|++++. ++.+||++|+++++|.++++++..++..|+.+++++++.++...+
T Consensus 368 ~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 447 (502)
T PRK08276 368 HGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAG 447 (502)
T ss_pred CCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCC
Confidence 799999999999999999886 899999999999999999999999998899999999987654434
Q ss_pred H---HHHHHHhhcc
Q psy4966 137 A---EEVKQFVEFP 147 (149)
Q Consensus 137 ~---~~l~~~l~~~ 147 (149)
. +.+.+.+++.
T Consensus 448 ~~~~~~i~~~~~~~ 461 (502)
T PRK08276 448 DALAAELIAWLRGR 461 (502)
T ss_pred hhhHHHHHHHHHhh
Confidence 3 3566666543
No 80
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.91 E-value=2.4e-23 Score=164.34 Aligned_cols=141 Identities=33% Similarity=0.601 Sum_probs=122.9
Q ss_pred CeeeeccCCccc-----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSK-----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~-----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.+. ....++|+ |++++++++.+ ++ ++++.|+.|||+++|+. +.||+++++.++..|
T Consensus 281 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~-p~~~~~~~i~~-~~-~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 357 (483)
T PRK03640 281 VYQSYGMTETASQIVTLSPEDALTKLGSAGK-PLFPCELKIEK-DG-VVVPPFEEGEIVVKGPNVTKGYLNREDATRETF 357 (483)
T ss_pred eeeeeccCcccccccccCcccccccCCCccc-ccCCcEEEEec-CC-CcCCCCCceEEEEECcchhhhhcCCHHHHHHHH
Confidence 467899999753 23467888 99999999998 54 78999999999999999 999999999998888
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
.++||+|||+++++++|++++. ++.+||+++.++++|.++++++.+++..+..++++++... .
T Consensus 358 -~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~--~ 434 (483)
T PRK03640 358 -QDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSG--E 434 (483)
T ss_pred -hcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCC--C
Confidence 5899999999999999999886 8999999999999999999999998888888888887543 5
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+.++++++|++.
T Consensus 435 ~~~~~l~~~~~~~ 447 (483)
T PRK03640 435 VTEEELRHFCEEK 447 (483)
T ss_pred CCHHHHHHHHHHh
Confidence 6778888888764
No 81
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.91 E-value=3.5e-23 Score=165.12 Aligned_cols=141 Identities=28% Similarity=0.421 Sum_probs=122.5
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||++.. ...++|+ |+|+++++|+| ++++++++|+.|||+++|+. +.||++++.. .+
T Consensus 320 v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~---~~- 393 (516)
T PRK13383 320 LYNGYGSTEVGIGALATPADLRDAPETVGK-PVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGGK---AV- 393 (516)
T ss_pred hhhcccccccccceeccccccccCCCcccC-CCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCchh---he-
Confidence 3578999998531 2346888 99999999999 78899999999999999999 9999987642 22
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.+|||+|||++++|++|++++. +|.+||++|.+++.|.+++++++++...|+.+.++|++.++...
T Consensus 394 ~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~ 473 (516)
T PRK13383 394 VDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGV 473 (516)
T ss_pred ecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCC
Confidence 4799999999999999999986 89999999999999999999999999889999999998877667
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.+++++++++.
T Consensus 474 ~~~~l~~~~~~~ 485 (516)
T PRK13383 474 DAAQLRDYLKDR 485 (516)
T ss_pred CHHHHHHHHHHh
Confidence 778888888764
No 82
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.91 E-value=2.7e-23 Score=180.35 Aligned_cols=145 Identities=19% Similarity=0.245 Sum_probs=121.9
Q ss_pred CeeeeccCCcccc----------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchh
Q psy4966 1 MFLVVGLVGKSKQ----------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEA 63 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~ 63 (149)
++..||+||++.. ...++|+ |++++.++|+| ++++++|.|..|||+|+|+. +.||+++++.
T Consensus 745 l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~ 822 (1296)
T PRK10252 745 LHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGY-PVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDL 822 (1296)
T ss_pred EEeCCCcchhhheeeeeecccccccccCCCCCCccc-ccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCccc
Confidence 3678999997531 1235787 99999999999 89999999999999999999 9999999999
Q ss_pred hhcccCC------CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeee----cCCC
Q psy4966 64 TKEMLDD------DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIP----HDVF 119 (149)
Q Consensus 64 ~~~~~~~------~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~----~~~~ 119 (149)
|++.|.. ++||+|||+|+++++|+++|+ +|.|||++|.++|+|.+++|+++. +...
T Consensus 823 t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~ 902 (1296)
T PRK10252 823 TASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATG 902 (1296)
T ss_pred chhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEEeccccccCC
Confidence 9998853 349999999999999999997 999999999999999999887653 1112
Q ss_pred C--CeEEEEEEeCCCCCCCHHHHHHHhhcc
Q psy4966 120 G--ELPAAVVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 120 g--~~~~a~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
| ..++++++...+...+.++|++++++.
T Consensus 903 ~~~~~lva~v~~~~~~~~~~~~l~~~l~~~ 932 (1296)
T PRK10252 903 GDARQLVGYLVSQSGLPLDTSALQAQLRER 932 (1296)
T ss_pred CCccEEEEEEEcCCCCCCCHHHHHHHHHhh
Confidence 3 479999998776667788899888764
No 83
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.90 E-value=1.1e-22 Score=161.92 Aligned_cols=144 Identities=28% Similarity=0.493 Sum_probs=125.1
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-C-ccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-F-LGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~-~gY~~~~~~~~~~~ 68 (149)
++..||+||.+.. ...++|. |++++.++++| +++++++.|+.|||+++++. + .+|++++..+...+
T Consensus 299 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~ 376 (509)
T PRK12406 299 IYEYYGSTESGAVTFATSEDALSHPGTVGK-AAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID 376 (509)
T ss_pred EEeeccccccCceEecCcccccccCCCcCc-cCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhccccc
Confidence 3578999998642 2356787 99999999999 78899999999999999998 5 49999998887766
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
.++||+|||+++++++|++++. ++.+||+.|+++++|.++++++.++...++.+++++++.++..
T Consensus 377 -~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 455 (509)
T PRK12406 377 -RGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGAT 455 (509)
T ss_pred -CCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCC
Confidence 6899999999999999999986 8999999999999999999999999888899999999877666
Q ss_pred CCHHHHHHHhhcc
Q psy4966 135 VTAEEVKQFVEFP 147 (149)
Q Consensus 135 ~~~~~l~~~l~~~ 147 (149)
.+.++|.+.+++.
T Consensus 456 ~~~~~l~~~l~~~ 468 (509)
T PRK12406 456 LDEADIRAQLKAR 468 (509)
T ss_pred CCHHHHHHHHHHh
Confidence 6778888887764
No 84
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.90 E-value=5.1e-23 Score=166.58 Aligned_cols=120 Identities=30% Similarity=0.553 Sum_probs=102.2
Q ss_pred eEEEEcCCCCccCCC--CCeeEEEEEcCC-CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE------------
Q psy4966 27 AIKIIDPVTSVQLPD--GKTGELCLKGDV-FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII------------ 91 (149)
Q Consensus 27 ~~~i~d~~~g~~~~~--g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~------------ 91 (149)
.+.+.+++.+++++. +..|||+++|+. +.|||++++.+...| .++||+|||+|++|++|+++|+
T Consensus 373 ~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~ 451 (579)
T PLN03102 373 DVDVKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGE 451 (579)
T ss_pred ceEEeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCE
Confidence 456677556677764 367999999999 999999999999988 5789999999999999999986
Q ss_pred --ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC----------CHHHHHHHhhcc
Q psy4966 92 --SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV----------TAEEVKQFVEFP 147 (149)
Q Consensus 92 --~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~----------~~~~l~~~l~~~ 147 (149)
+|.|||++|.+||.|.+++|++++++.+|+.++++|++.++... +..+++++|++.
T Consensus 452 ~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 519 (579)
T PLN03102 452 NISSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCREN 519 (579)
T ss_pred EECHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccccccccccccccHHHHHHHHHhh
Confidence 89999999999999999999999999999999999998765432 345677777654
No 85
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.90 E-value=6.9e-23 Score=164.84 Aligned_cols=143 Identities=36% Similarity=0.526 Sum_probs=123.2
Q ss_pred CeeeeccCCcccc----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSKQ----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||.+.. ...++|. |+|++.+++++ +++++++.|+.|||+++|+. +.||+++++.+...|
T Consensus 353 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~- 429 (560)
T PRK08974 353 LLEGYGLTECSPLVSVNPYDLDYYSGSIGL-PVPSTEIKLVD-DDGNEVPPGEPGELWVKGPQVMLGYWQRPEATDEVI- 429 (560)
T ss_pred EEeeecccccCceeeccCCCCcccCCcccc-CcCCCEEEEEC-CCCCCCCCCCceEEEEecCCcchhhcCChhhhhhhh-
Confidence 3678999997632 2356787 99999999999 78899999999999999999 999999999998888
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.++||+|||+++++++|+++++ +|.+||++|.++++|.+++|++.++...|+.++++++..+ ...
T Consensus 430 ~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~-~~~ 508 (560)
T PRK08974 430 KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKD-PSL 508 (560)
T ss_pred hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCC-CCC
Confidence 6899999999999999999986 8999999999999999999999999988888888776543 345
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.+++++++++.
T Consensus 509 ~~~~l~~~l~~~ 520 (560)
T PRK08974 509 TEEELITHCRRH 520 (560)
T ss_pred CHHHHHHHHHhh
Confidence 667787777654
No 86
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.90 E-value=6.1e-23 Score=161.97 Aligned_cols=129 Identities=29% Similarity=0.474 Sum_probs=110.2
Q ss_pred eeeeccCCcccc-----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 2 FLVVGLVGKSKQ-----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 2 ~~~~g~~e~~~~-----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
+..||+||++.. ...++|+ |+|+++++++ .|+.|||+++|+. +.||++++. .
T Consensus 258 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~p~~~v~i~---------~g~~Gel~v~g~~~~~gY~~~~~------~ 321 (452)
T PRK07445 258 APTYGMTETASQIATLKPDDFLAGNNSSGQ-VLPHAQITIP---------ANQTGNITIQAQSLALGYYPQIL------D 321 (452)
T ss_pred ecCcchhhhcccccccCchhhccCCCcCCc-cCCCCeEEEc---------CCCcceEEEeCCccchhhcCCcc------C
Confidence 568999998632 2245777 9999999987 3678999999999 999997642 2
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.++||+|||++++|+||+++|. +|.|||++|.+||+|.+|+|++.+++.+|+.++++++..++ ..
T Consensus 322 ~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~-~~ 400 (452)
T PRK07445 322 SQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDP-SI 400 (452)
T ss_pred CCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCC-CC
Confidence 4789999999999999999997 99999999999999999999999999999999999998755 46
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.++++++|++.
T Consensus 401 ~~~~l~~~~~~~ 412 (452)
T PRK07445 401 SLEELKTAIKDQ 412 (452)
T ss_pred CHHHHHHHHHHh
Confidence 678888888764
No 87
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.90 E-value=8.5e-23 Score=163.73 Aligned_cols=145 Identities=28% Similarity=0.451 Sum_probs=123.7
Q ss_pred CeeeeccCCccc----------ccccCcCccccCCceEEEEcC-CCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDP-VTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~-~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.+. ....++|. |++++.+++.+. +++++++.|+.|||+++|+. +.||+++++.+++.|
T Consensus 340 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 418 (541)
T TIGR03205 340 LKSGWGMTETCSPGTGHPPEGPDKPGSIGL-MLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWNRPEESAEAF 418 (541)
T ss_pred eecccccccCCcccccCCCCCCCCCCCcce-eccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccCChhhhHhhh
Confidence 357899999853 12346787 999999887631 66789999999999999999 999999999998888
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC-
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS- 133 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~- 133 (149)
.++||+|||+++++++|+++|+ +|.+||++|.++++|.+++|++++++..++.+++++++..+.
T Consensus 419 -~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 497 (541)
T TIGR03205 419 -VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAK 497 (541)
T ss_pred -ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEECCCCC
Confidence 4789999999999999999986 899999999999999999999999988889999999987653
Q ss_pred CCCHHHHHHHhhcc
Q psy4966 134 SVTAEEVKQFVEFP 147 (149)
Q Consensus 134 ~~~~~~l~~~l~~~ 147 (149)
..+.+++.+++++.
T Consensus 498 ~~~~~~l~~~~~~~ 511 (541)
T TIGR03205 498 PFSLDELRAFLAGK 511 (541)
T ss_pred cCCHHHHHHHHHhh
Confidence 35677888887764
No 88
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.90 E-value=4.7e-23 Score=166.61 Aligned_cols=127 Identities=28% Similarity=0.493 Sum_probs=110.2
Q ss_pred cCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE---
Q psy4966 16 TLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII--- 91 (149)
Q Consensus 16 ~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~--- 91 (149)
.++|. |+|++.++++| ++++.++.|+.|||+++|+. +.|||++ ..+...+..++||+|||++++ ++|+++|+
T Consensus 385 ~~vG~-~~p~~~v~i~d-~~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~ 460 (579)
T PRK09192 385 VNCGK-ALPGHEIEIRN-EAGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRA 460 (579)
T ss_pred eecCC-cCCCcEEEEEC-CCCCCCCCCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEecc
Confidence 35787 99999999999 78899999999999999999 9999999 667777777899999999999 89999997
Q ss_pred -----------ChHHHHHHHhcCCCcc--cEEEEeeecCCCCCeEEEEEEeCCCCCCCHHHHHHHhhcc
Q psy4966 92 -----------SPCELESIFRQHPDVE--DVAVIGIPHDVFGELPAAVVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 92 -----------~~~eIE~~l~~~~~V~--~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
+|.|||++|++||+|. ++++++++++. ++.++++++..++...+.++|.+++++.
T Consensus 461 dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 528 (579)
T PRK09192 461 KDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEERRGQLIHALAAL 528 (579)
T ss_pred ccEEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChHHHHHHHHHHHHH
Confidence 8999999999999998 89999998886 5578888887765555667777777653
No 89
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.90 E-value=1.2e-22 Score=161.80 Aligned_cols=143 Identities=27% Similarity=0.414 Sum_probs=122.0
Q ss_pred eeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCCCccccCCchhhhcccCCC
Q psy4966 2 FLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDVFLGYRNKVEATKEMLDDD 71 (149)
Q Consensus 2 ~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~~~gY~~~~~~~~~~~~~~ 71 (149)
+..||+||+.. ....++|+ |+++ .++++| +++.+++.|+.|||+++|+.+.||+++++.+...+..+
T Consensus 304 ~~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~ 380 (511)
T PRK13391 304 HEYYAATEGLGFTACDSEEWLAHPGTVGR-AMFG-DLHILD-DDGAELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPD 380 (511)
T ss_pred eeeeccccccceEEecCccccccCCCcCC-cccc-eEEEEC-CCCCCCCCCCceEEEEecCcceEEcCChhHhHHhhccC
Confidence 56899999864 23456788 9999 689999 88999999999999999999779999999998887554
Q ss_pred -CeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC-
Q psy4966 72 -GWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV- 135 (149)
Q Consensus 72 -~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~- 135 (149)
+||+|||+++++++|++++. ++.+||++|.+|+.|.+++|++.++...|+.++++++..++...
T Consensus 381 ~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (511)
T PRK13391 381 GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPG 460 (511)
T ss_pred CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcc
Confidence 89999999999999999996 89999999999999999999999999999999999987654322
Q ss_pred --CHHHHHHHhhcc
Q psy4966 136 --TAEEVKQFVEFP 147 (149)
Q Consensus 136 --~~~~l~~~l~~~ 147 (149)
..++++++|++.
T Consensus 461 ~~~~~~l~~~~~~~ 474 (511)
T PRK13391 461 PALAAELIAFCRQR 474 (511)
T ss_pred cchHHHHHHHHHhh
Confidence 246777777754
No 90
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.90 E-value=1.1e-22 Score=164.31 Aligned_cols=145 Identities=28% Similarity=0.434 Sum_probs=120.1
Q ss_pred CeeeeccCCccccc-----------------ccCcCccccCCceEEEEcCCCCccCC--CCCeeEEEEEcCC-CccccCC
Q psy4966 1 MFLVVGLVGKSKQK-----------------ATLTGKHFQEHNAIKIIDPVTSVQLP--DGKTGELCLKGDV-FLGYRNK 60 (149)
Q Consensus 1 ~~~~~g~~e~~~~~-----------------~~~~g~~p~~~~~~~i~d~~~g~~~~--~g~~Gel~v~~~~-~~gY~~~ 60 (149)
++..||+||++... ..++|+ +.+++++++++ + +..++ ++..|||+++|+. +.|||++
T Consensus 326 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~ 402 (576)
T PRK05620 326 VVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGR-FPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYHS 402 (576)
T ss_pred eeeeccccccccceeeeccCCccccccccccccccCC-cCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccCC
Confidence 46789999986421 125677 88999999999 5 66554 5788999999999 9999999
Q ss_pred chhh----------------hcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEE
Q psy4966 61 VEAT----------------KEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVA 110 (149)
Q Consensus 61 ~~~~----------------~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~ 110 (149)
++.+ ...+..++||+|||+++++++|+++|. ++.+||++|.+||.|.+++
T Consensus 403 ~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v~~~~ 482 (576)
T PRK05620 403 PTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEVVECA 482 (576)
T ss_pred ccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCceEEE
Confidence 9877 223445789999999999999999997 8999999999999999999
Q ss_pred EEeeecCCCCCeEEEEEEeCCCCC---CCHHHHHHHhhccc
Q psy4966 111 VIGIPHDVFGELPAAVVVPKPNSS---VTAEEVKQFVEFPR 148 (149)
Q Consensus 111 v~~~~~~~~g~~~~a~v~~~~~~~---~~~~~l~~~l~~~~ 148 (149)
|++.++...|+.+++++++.++.. .+.++|+++|++..
T Consensus 483 vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L 523 (576)
T PRK05620 483 VIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRL 523 (576)
T ss_pred EEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhC
Confidence 999999999999999998876543 34678888887643
No 91
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.90 E-value=6.5e-23 Score=164.49 Aligned_cols=141 Identities=30% Similarity=0.385 Sum_probs=119.7
Q ss_pred CeeeeccCCccccc--------------------ccCcCccccCCceEEEEcCCCCccCCCC--CeeEEEEEcCC-Cccc
Q psy4966 1 MFLVVGLVGKSKQK--------------------ATLTGKHFQEHNAIKIIDPVTSVQLPDG--KTGELCLKGDV-FLGY 57 (149)
Q Consensus 1 ~~~~~g~~e~~~~~--------------------~~~~g~~p~~~~~~~i~d~~~g~~~~~g--~~Gel~v~~~~-~~gY 57 (149)
++..||+||++... ..++|+ |+|++.++++| +++++++.+ +.|||+++|+. +.||
T Consensus 321 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy 398 (539)
T PRK07008 321 VIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGR-VIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRY 398 (539)
T ss_pred eecccccccccccceecccccccccCCchhhhhhcccCCc-cccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhh
Confidence 46789999986311 235777 99999999999 778888754 57999999999 9999
Q ss_pred cCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeE
Q psy4966 58 RNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELP 123 (149)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~ 123 (149)
++++. ..+ .++||+|||+++++++|++++. +|.|||++|..+|.|.+++++++++..+++.+
T Consensus 399 ~~~~~---~~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~ 474 (539)
T PRK07008 399 FRGDA---SPL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERP 474 (539)
T ss_pred cCChh---hhh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccce
Confidence 99983 234 3689999999999999999986 89999999999999999999999998888999
Q ss_pred EEEEEeCCCCCCCHHHHHHHhhcc
Q psy4966 124 AAVVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 124 ~a~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
+++|+..++...+.+++.++|+++
T Consensus 475 ~~~v~~~~~~~~~~~~l~~~~~~~ 498 (539)
T PRK07008 475 LLVVVKRPGAEVTREELLAFYEGK 498 (539)
T ss_pred EEEEEeCCCCccCHHHHHHHHHhh
Confidence 999888776667888888888764
No 92
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.90 E-value=1.3e-22 Score=160.92 Aligned_cols=143 Identities=22% Similarity=0.230 Sum_probs=115.2
Q ss_pred CeeeeccCCccc--------------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhh
Q psy4966 1 MFLVVGLVGKSK--------------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATK 65 (149)
Q Consensus 1 ~~~~~g~~e~~~--------------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~ 65 (149)
++..||+||++. ....++|. |+|+++++|++ +++.++++|+.|||+++|+. +.||+++++.+.
T Consensus 287 ~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~-~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~ 364 (502)
T TIGR01734 287 IYNTYGPTEATVAVTSVKITQEILDQYPRLPIGF-AKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTA 364 (502)
T ss_pred EEeCccCCcceEEEEEEEccccccccCCcccccc-ccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccccCCcccch
Confidence 367899999753 11235777 99999999999 78999999999999999999 999999999888
Q ss_pred cccC---CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeee-cCCCCCeEEEEE
Q psy4966 66 EMLD---DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIP-HDVFGELPAAVV 127 (149)
Q Consensus 66 ~~~~---~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~-~~~~g~~~~a~v 127 (149)
..|. .++||+|||+|++|++ +++++ +|.+||++|.++|.|++++++++. ....++.+++++
T Consensus 365 ~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v 443 (502)
T TIGR01734 365 EAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAI 443 (502)
T ss_pred HhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEE
Confidence 7662 3469999999999976 88886 999999999999999999999976 444567888988
Q ss_pred EeCCCCCCCH----HHHHHHhhc
Q psy4966 128 VPKPNSSVTA----EEVKQFVEF 146 (149)
Q Consensus 128 ~~~~~~~~~~----~~l~~~l~~ 146 (149)
+.......+. .++++.+++
T Consensus 444 ~~~~~~~~~~~~~~~~i~~~~~~ 466 (502)
T TIGR01734 444 VPETEDFEKEFQLTKAIKKELKK 466 (502)
T ss_pred EecccccccchhhHHHHHHHHhh
Confidence 8765432222 455665554
No 93
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.90 E-value=1.4e-22 Score=161.19 Aligned_cols=144 Identities=25% Similarity=0.352 Sum_probs=123.2
Q ss_pred CeeeeccCCcccc---------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCC
Q psy4966 1 MFLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDD 70 (149)
Q Consensus 1 ~~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~ 70 (149)
++..||+||.+.. ...++|. |++++.++++| +++.++++|+.|||+++|+. +.||+++++.+...| .
T Consensus 306 v~~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~ 382 (508)
T TIGR02262 306 IVDGIGSTEMLHIFLSNLPGDVRYGTSGK-PVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF-Q 382 (508)
T ss_pred hhhCccccccCceeecCCccCCCCCCcCC-CCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh-h
Confidence 3568999998632 2346777 99999999999 88999999999999999999 999999999998888 5
Q ss_pred CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC--
Q psy4966 71 DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS-- 134 (149)
Q Consensus 71 ~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~-- 134 (149)
++||+|||+++++++|++++. +|.+||+.|.++++|.++++++.++...++++.+++++.+...
T Consensus 383 ~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 462 (508)
T TIGR02262 383 GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDID 462 (508)
T ss_pred cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccc
Confidence 789999999999999999886 8999999999999999999999888887888899998876532
Q ss_pred -CCHHHHHHHhhcc
Q psy4966 135 -VTAEEVKQFVEFP 147 (149)
Q Consensus 135 -~~~~~l~~~l~~~ 147 (149)
...+++.+.++++
T Consensus 463 ~~~~~~i~~~~~~~ 476 (508)
T TIGR02262 463 TALETELKEHVKDR 476 (508)
T ss_pred cccHHHHHHHHHHh
Confidence 3356777777654
No 94
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.89 E-value=2.7e-22 Score=159.21 Aligned_cols=144 Identities=39% Similarity=0.647 Sum_probs=126.8
Q ss_pred CeeeeccCCcccc---------------cccCcCccccCCceEEEEcCCCCccCCC--CCeeEEEEEcCC-CccccCCch
Q psy4966 1 MFLVVGLVGKSKQ---------------KATLTGKHFQEHNAIKIIDPVTSVQLPD--GKTGELCLKGDV-FLGYRNKVE 62 (149)
Q Consensus 1 ~~~~~g~~e~~~~---------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~--g~~Gel~v~~~~-~~gY~~~~~ 62 (149)
++..||+||.+.. ...++|. |+|++.++|+| +++++++. |+.|||+++|+. +.||+.+++
T Consensus 309 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~ 386 (521)
T PRK06187 309 LVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGR-PLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPE 386 (521)
T ss_pred hheeeccCccCcccccCCcccccccccccCCcccc-ccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHH
Confidence 3568999998631 3446787 99999999999 77888988 999999999999 999999999
Q ss_pred hhhcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEE
Q psy4966 63 ATKEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVV 128 (149)
Q Consensus 63 ~~~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~ 128 (149)
.+...| .++||+|||+++++++|++++. +|.+||+.|.++++|.+++|++.+++..++.++++++
T Consensus 387 ~~~~~~-~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 465 (521)
T PRK06187 387 ATAETI-DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVV 465 (521)
T ss_pred HHHHHh-hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEE
Confidence 998888 4779999999999999999886 8999999999999999999999998888899999999
Q ss_pred eCCCCCCCHHHHHHHhhcc
Q psy4966 129 PKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 129 ~~~~~~~~~~~l~~~l~~~ 147 (149)
+.++...+.+++++++++.
T Consensus 466 ~~~~~~~~~~~l~~~l~~~ 484 (521)
T PRK06187 466 LKPGATLDAKELRAFLRGR 484 (521)
T ss_pred ECCCCCCCHHHHHHHHHHh
Confidence 8887777888888888664
No 95
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.89 E-value=3.9e-23 Score=168.26 Aligned_cols=118 Identities=24% Similarity=0.341 Sum_probs=100.5
Q ss_pred eeeeccCCcccc---------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCC
Q psy4966 2 FLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDD 71 (149)
Q Consensus 2 ~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~ 71 (149)
+..||+||++.. ..+++|+ |+|+++++++| + +..|||+++|+. |.|||++|+.+.+.|..+
T Consensus 369 ~~~YG~TE~~~~~~~~~~~~~~~~svG~-p~pg~~v~i~d-~-------~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~d 439 (614)
T PRK08180 369 MTGLGMTETAPSATFTTGPLSRAGNIGL-PAPGCEVKLVP-V-------GGKLEVRVKGPNVTPGYWRAPELTAEAFDEE 439 (614)
T ss_pred eeeecccccCCceEecccccCCCCcccC-ccCCcEEEEec-C-------CCCcEEEEecCccchhhcCChhHhHhhcccC
Confidence 568999998632 3457888 99999999998 4 345999999999 999999999999999778
Q ss_pred CeEEcCceEEE----cCCCeEEEE-----------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 72 GWLHTGDLAYR----LPDGTHFII-----------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 72 ~~~~TGD~~~~----~~~G~~~i~-----------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
|||+|||+|++ |++|+++|+ ++.|||.++.+||.|.+++|++.+++. +.|+|+++
T Consensus 440 gw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~~----~~a~V~~~ 515 (614)
T PRK08180 440 GYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHDRDE----IGLLVFPN 515 (614)
T ss_pred CceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCCCCc----eEEEEEcC
Confidence 99999999999 468888886 378999999999999999999988753 67888876
Q ss_pred CC
Q psy4966 131 PN 132 (149)
Q Consensus 131 ~~ 132 (149)
++
T Consensus 516 ~~ 517 (614)
T PRK08180 516 LD 517 (614)
T ss_pred HH
Confidence 54
No 96
>PLN02479 acetate-CoA ligase
Probab=99.89 E-value=1.4e-22 Score=163.50 Aligned_cols=128 Identities=30% Similarity=0.562 Sum_probs=108.1
Q ss_pred cCccccCCce-EEEEcCCCCccCCCC--CeeEEEEEcCC-CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE--
Q psy4966 18 TGKHFQEHNA-IKIIDPVTSVQLPDG--KTGELCLKGDV-FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII-- 91 (149)
Q Consensus 18 ~g~~p~~~~~-~~i~d~~~g~~~~~g--~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~-- 91 (149)
.|. +.++.. ++++|++++++++.+ +.|||+++|+. +.|||++++.+.+.| .++||+|||+++++++|+++|+
T Consensus 374 ~g~-~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR 451 (567)
T PLN02479 374 QGV-RYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDR 451 (567)
T ss_pred cCC-CcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEecc
Confidence 455 667765 789986678888764 67999999999 999999999999988 5899999999999999999996
Q ss_pred ------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC-----CCHHHHHHHhhcc
Q psy4966 92 ------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS-----VTAEEVKQFVEFP 147 (149)
Q Consensus 92 ------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~-----~~~~~l~~~l~~~ 147 (149)
+|.|||++|..||.|.+++|++.++..+++.+++++++.++.. ...++|.++++++
T Consensus 452 ~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~ 524 (567)
T PLN02479 452 SKDIIISGGENISSLEVENVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRER 524 (567)
T ss_pred ccceEEeCCEEEcHHHHHHHHHhCcccceeeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhh
Confidence 8999999999999999999999998888899999999876532 2245667666553
No 97
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.89 E-value=2.3e-22 Score=166.36 Aligned_cols=138 Identities=20% Similarity=0.214 Sum_probs=111.9
Q ss_pred CeeeeccCCccc---------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccC--Cchh-----
Q psy4966 1 MFLVVGLVGKSK---------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRN--KVEA----- 63 (149)
Q Consensus 1 ~~~~~g~~e~~~---------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~--~~~~----- 63 (149)
++..||+||++. ....++|+ |+|+++++++| .++. +..|||+++|+. +.|||+ +++.
T Consensus 507 l~~~YG~TE~~~~~~~~~~~~~~~~svG~-p~pg~~~~i~d-~~~~----~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~ 580 (718)
T PRK08043 507 ILEGYGVTECAPVVSINVPMAAKPGTVGR-ILPGMDARLLS-VPGI----EQGGRLQLKGPNIMNGYLRVEKPGVLEVPT 580 (718)
T ss_pred eecccCcccccceEEecCCcccCCCCCCC-cCCCCeeEEec-CCCC----CCceEEEEecCCccccccCCCCcccccccc
Confidence 367899999853 23568898 99999999999 5543 466999999999 999998 4442
Q ss_pred --hhcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEE
Q psy4966 64 --TKEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVV 127 (149)
Q Consensus 64 --~~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v 127 (149)
+...+..+|||+|||+|++|+||+++|+ +|.|||++|.+++.+.+++|++.++..+|+.+++++
T Consensus 581 ~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~ 660 (718)
T PRK08043 581 AENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFT 660 (718)
T ss_pred cccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEE
Confidence 2222335799999999999999999997 999999999999999888899999998999888776
Q ss_pred EeCCCCCCCHHHHHHHhhcc
Q psy4966 128 VPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 128 ~~~~~~~~~~~~l~~~l~~~ 147 (149)
. +...+.++++++|++.
T Consensus 661 ~---~~~~~~~~l~~~~~~~ 677 (718)
T PRK08043 661 T---DSELTREKLQQYAREH 677 (718)
T ss_pred c---CcccCHHHHHHHHHhc
Confidence 4 3346778898888764
No 98
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.89 E-value=4.1e-22 Score=159.70 Aligned_cols=128 Identities=35% Similarity=0.578 Sum_probs=110.8
Q ss_pred cCccccC-CceEEEEcCCCCccCCC-C-CeeEEEEEcCC-CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE--
Q psy4966 18 TGKHFQE-HNAIKIIDPVTSVQLPD-G-KTGELCLKGDV-FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII-- 91 (149)
Q Consensus 18 ~g~~p~~-~~~~~i~d~~~g~~~~~-g-~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~-- 91 (149)
.|. +++ ...++++|++++.+++. | ..|||+++|+. +.||+++++.+...| .++||+|||++++|++|+++|+
T Consensus 360 ~g~-~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR 437 (545)
T PRK08162 360 QGV-RYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAF-AGGWFHTGDLAVLHPDGYIKIKDR 437 (545)
T ss_pred CCc-ccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHh-hCCCcccCceEEEcCCccEEEEec
Confidence 344 444 34678889667888876 3 46999999999 999999999999888 5789999999999999999996
Q ss_pred ------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHHHHHHhhcc
Q psy4966 92 ------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 92 ------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
+|.+||++|..+++|.+++|++.+++..++.+++++++.++...+.++|+++|++.
T Consensus 438 ~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 505 (545)
T PRK08162 438 SKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASATEEEIIAHCREH 505 (545)
T ss_pred ccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEEeCCCCCCCHHHHHHHHHHh
Confidence 89999999999999999999999988888999999998877667888898888764
No 99
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.89 E-value=3.9e-22 Score=169.95 Aligned_cols=139 Identities=15% Similarity=0.181 Sum_probs=112.7
Q ss_pred CeeeeccCCcccc-------cccCcCccccCCc-eEEEE-----------cCCCC--ccCCCCCeeEEEEEcCCCccccC
Q psy4966 1 MFLVVGLVGKSKQ-------KATLTGKHFQEHN-AIKII-----------DPVTS--VQLPDGKTGELCLKGDVFLGYRN 59 (149)
Q Consensus 1 ~~~~~g~~e~~~~-------~~~~~g~~p~~~~-~~~i~-----------d~~~g--~~~~~g~~Gel~v~~~~~~gY~~ 59 (149)
++..||+||.+.. ...++|+ |+|++ +++|. + ++| +++++|+.|||+++++. |+
T Consensus 747 l~~~YG~TE~~~~~~~~~~~~~~svG~-p~pg~~~v~i~~~d~~~g~li~d-~~G~~~~~~~ge~Gel~~~~~~---~~- 820 (994)
T PRK07868 747 VVEFFATTDGQAVLANVSGAKIGSKGR-PLPGAGRVELAAYDPEHDLILED-DRGFVRRAEVNEVGVLLARARG---PI- 820 (994)
T ss_pred eeeeeecccccccccccCCCCCcccCC-ccCCCCceeEEEecCcCCceeec-CCceEEEcCCCCceEEEEecCC---CC-
Confidence 4678999997532 3467898 99997 66653 4 456 67889999999999986 22
Q ss_pred Cchhhh--cccC-CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCe
Q psy4966 60 KVEATK--EMLD-DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGEL 122 (149)
Q Consensus 60 ~~~~~~--~~~~-~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~ 122 (149)
+|+.+. ..|. .+|||+|||+|++|+||+|+|+ +|.|||++|.+||+|.+|+|++++++. ++.
T Consensus 821 ~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~~ 899 (994)
T PRK07868 821 DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVEVGG-RQL 899 (994)
T ss_pred ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeecCCC-Cce
Confidence 344332 2342 4799999999999999999997 899999999999999999999998876 688
Q ss_pred EEEEEEeCCCCCCCHHHHHHHhhc
Q psy4966 123 PAAVVVPKPNSSVTAEEVKQFVEF 146 (149)
Q Consensus 123 ~~a~v~~~~~~~~~~~~l~~~l~~ 146 (149)
++++|+++++...+.++|+++|++
T Consensus 900 ~~a~Vv~~~~~~~~~~~L~~~l~~ 923 (994)
T PRK07868 900 AVAAVTLRPGAAITAADLTEALAS 923 (994)
T ss_pred EEEEEEeCCCCcCCHHHHHHHHHh
Confidence 999999988777888999999874
No 100
>PRK05691 peptide synthase; Validated
Probab=99.89 E-value=2.7e-22 Score=187.90 Aligned_cols=144 Identities=22% Similarity=0.258 Sum_probs=124.3
Q ss_pred CeeeeccCCcccc-----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ-----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~-----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||++.. ...++|+ |++++.++|+| ++++++|.|.+|||+|+|+. +.||+++|+.|++.|
T Consensus 1417 l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f 1494 (4334)
T PRK05691 1417 LHNRYGPTETAINVTHWQCQAEDGERSPIGR-PLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPALTAERF 1494 (4334)
T ss_pred EEeCCCcChheeeeeeeecccccCCCCcccc-eeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCccccHhhC
Confidence 3678999997631 2345788 99999999999 88999999999999999999 999999999999988
Q ss_pred CC-------CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEE
Q psy4966 69 DD-------DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVV 127 (149)
Q Consensus 69 ~~-------~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v 127 (149)
.. .+||+|||++++++||+++|+ +|.|||++|.++|+|.+++|++..+. .|+.+++++
T Consensus 1495 ~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~-~~~~lva~~ 1573 (4334)
T PRK05691 1495 VPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVREGA-AGAQLVGYY 1573 (4334)
T ss_pred CCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEeeCC-CCCEEEEEE
Confidence 43 359999999999999999997 99999999999999999999865444 468899999
Q ss_pred EeCCCCCCCHHHHHHHhhcc
Q psy4966 128 VPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 128 ~~~~~~~~~~~~l~~~l~~~ 147 (149)
+...+...+.++|+++|++.
T Consensus 1574 ~~~~~~~~~~~~l~~~l~~~ 1593 (4334)
T PRK05691 1574 TGEAGQEAEAERLKAALAAE 1593 (4334)
T ss_pred EeCCCCCCCHHHHHHHHHHh
Confidence 98777667778898888764
No 101
>PRK12467 peptide synthase; Provisional
Probab=99.89 E-value=2.9e-22 Score=186.72 Aligned_cols=144 Identities=26% Similarity=0.291 Sum_probs=121.3
Q ss_pred CeeeeccCCcccc--------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhh
Q psy4966 1 MFLVVGLVGKSKQ--------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATK 65 (149)
Q Consensus 1 ~~~~~g~~e~~~~--------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~ 65 (149)
++..||+||++.. ...++|+ |++++.++|+| ++++++|.|.+|||+|+|+. +.||+++|+.|+
T Consensus 1863 l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~-p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~ 1940 (3956)
T PRK12467 1863 LFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQ-PIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTA 1940 (3956)
T ss_pred EEeCccCCcCEEeEEEEeccccccccCCCCCccc-ccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChhhhh
Confidence 4688999998621 1246788 99999999999 88999999999999999999 999999999999
Q ss_pred cccCC-------CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEE
Q psy4966 66 EMLDD-------DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPA 124 (149)
Q Consensus 66 ~~~~~-------~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~ 124 (149)
+.|.. .+||+|||++++++||+++|+ +|.|||++|.++|+|.+|+|++.+ ...++.++
T Consensus 1941 ~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a~vv~~~-~~~~~~lv 2019 (3956)
T PRK12467 1941 ERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREAVVIAQD-GANGKQLV 2019 (3956)
T ss_pred hhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceEEEEEec-CCCCcEEE
Confidence 98842 359999999999999999997 999999999999999999999886 44568899
Q ss_pred EEEEeCCCCCC--------CHHHHHHHhhcc
Q psy4966 125 AVVVPKPNSSV--------TAEEVKQFVEFP 147 (149)
Q Consensus 125 a~v~~~~~~~~--------~~~~l~~~l~~~ 147 (149)
++++...+... ..++|+++|++.
T Consensus 2020 a~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~ 2050 (3956)
T PRK12467 2020 AYVVPTDPGLVDDDEAQVALRAILKNHLKAS 2050 (3956)
T ss_pred EEEEecCcccccccccccccHHHHHHHHHhh
Confidence 99987654322 345677777654
No 102
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.89 E-value=2.5e-22 Score=162.12 Aligned_cols=107 Identities=32% Similarity=0.574 Sum_probs=94.1
Q ss_pred CceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC-----------CCCeEEcCceEEEcCCCeEEEE-
Q psy4966 25 HNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD-----------DDGWLHTGDLAYRLPDGTHFII- 91 (149)
Q Consensus 25 ~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~-----------~~~~~~TGD~~~~~~~G~~~i~- 91 (149)
+.+++++|++++.+++.|+.|||+++|+. +.|||++++.+++.|. .++||+|||+++++ +|+++|+
T Consensus 378 ~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~G 456 (578)
T PRK05850 378 SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVG 456 (578)
T ss_pred CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEc
Confidence 47899999777889999999999999999 9999999999998884 25799999999998 8999997
Q ss_pred -------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 92 -------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 92 -------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
+|.|||++|.+|+.+ +++++++++. +++.++++|+++++..
T Consensus 457 R~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~ 510 (578)
T PRK05850 457 RIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGD 510 (578)
T ss_pred ccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccC
Confidence 999999999999985 5788888887 6888999999876543
No 103
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.88 E-value=1.6e-21 Score=156.43 Aligned_cols=143 Identities=30% Similarity=0.373 Sum_probs=121.0
Q ss_pred CeeeeccCCccccc--------------------ccCcCccccCCceEEEEcCCCCccCCCC--CeeEEEEEcCC-Cccc
Q psy4966 1 MFLVVGLVGKSKQK--------------------ATLTGKHFQEHNAIKIIDPVTSVQLPDG--KTGELCLKGDV-FLGY 57 (149)
Q Consensus 1 ~~~~~g~~e~~~~~--------------------~~~~g~~p~~~~~~~i~d~~~g~~~~~g--~~Gel~v~~~~-~~gY 57 (149)
++..||+||++... ..++|+ |+++++++++| +++++++.+ ..|||+++|+. +.||
T Consensus 321 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy 398 (542)
T PRK06018 321 VRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGY-PPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAY 398 (542)
T ss_pred eEeeecccccCcccccccCccccccCCchhhhhccccCCC-CCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhh
Confidence 46789999986321 135677 99999999999 788888763 67999999999 9999
Q ss_pred cCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeE
Q psy4966 58 RNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELP 123 (149)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~ 123 (149)
|++. ...++.++||+|||+++++++|++++. ++.|||+.|.++|+|.+++|++.++..+++.+
T Consensus 399 ~~~~---~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~ 475 (542)
T PRK06018 399 YRVD---GEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERP 475 (542)
T ss_pred hcCc---ccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCcee
Confidence 9843 334556899999999999999999886 89999999999999999999999999888999
Q ss_pred EEEEEeCCCCCCCHHHHHHHhhccc
Q psy4966 124 AAVVVPKPNSSVTAEEVKQFVEFPR 148 (149)
Q Consensus 124 ~a~v~~~~~~~~~~~~l~~~l~~~~ 148 (149)
.+++++.++...+.+.+.+++++..
T Consensus 476 ~~~v~~~~~~~~~~~~l~~~~~~~l 500 (542)
T PRK06018 476 LLIVQLKPGETATREEILKYMDGKI 500 (542)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhhC
Confidence 9999988877788888888887653
No 104
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.88 E-value=1.3e-21 Score=154.99 Aligned_cols=142 Identities=29% Similarity=0.347 Sum_probs=117.3
Q ss_pred eeeeccCCccc--------------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhc
Q psy4966 2 FLVVGLVGKSK--------------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKE 66 (149)
Q Consensus 2 ~~~~g~~e~~~--------------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~ 66 (149)
+..||+||++. ....++|. |+++++++|+| +++.+++.|..|||+++|+. +.||+++++.+..
T Consensus 290 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~ 367 (503)
T PRK04813 290 YNTYGPTEATVAVTSIEITDEMLDQYKRLPIGY-AKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAE 367 (503)
T ss_pred EeCcccchheeEEEEEEecccccccCCCCcccc-cCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHH
Confidence 57899999742 12335777 99999999999 88999999999999999999 9999999999988
Q ss_pred ccC---CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEe
Q psy4966 67 MLD---DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVP 129 (149)
Q Consensus 67 ~~~---~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~ 129 (149)
.|. +.+||+|||++++ ++|++++. +|.+||+.|.++|+|+++++++.++...++.++++++.
T Consensus 368 ~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 446 (503)
T PRK04813 368 AFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVP 446 (503)
T ss_pred hhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEe
Confidence 773 2359999999999 89999986 89999999999999999999998877777889999987
Q ss_pred CCCCCC-C---HHHHHHHhhc
Q psy4966 130 KPNSSV-T---AEEVKQFVEF 146 (149)
Q Consensus 130 ~~~~~~-~---~~~l~~~l~~ 146 (149)
.++... . .++++++|++
T Consensus 447 ~~~~~~~~~~~~~~l~~~~~~ 467 (503)
T PRK04813 447 KEEDFEREFELTKAIKKELKE 467 (503)
T ss_pred ccccccccchhHHHHHHHHHh
Confidence 653211 1 1346666654
No 105
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.88 E-value=1.5e-21 Score=149.44 Aligned_cols=130 Identities=28% Similarity=0.461 Sum_probs=111.1
Q ss_pred CeeeeccCCcccccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCCCeEEcCce
Q psy4966 1 MFLVVGLVGKSKQKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDDGWLHTGDL 79 (149)
Q Consensus 1 ~~~~~g~~e~~~~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~~~TGD~ 79 (149)
++..||+||++... ...|. |+|++++++.+ |+|+++|+. +.||++++..+ .|..++||+|||+
T Consensus 178 v~~~YG~TE~~~~~-~~~G~-~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl 241 (358)
T PRK07824 178 VVRTYGMSETSGGC-VYDGV-PLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDL 241 (358)
T ss_pred EEecccCCccCCCc-CcCce-eCCCCEEEecC------------CEEEEecCccccccCCCcccc--cccCCCceecccE
Confidence 36789999986532 34577 99999999844 899999999 99999988754 3445789999999
Q ss_pred EEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHHHHHHhh
Q psy4966 80 AYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEEVKQFVE 145 (149)
Q Consensus 80 ~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~ 145 (149)
+++ ++|++++. +|.+||++|.+||+|.+++|++.+++..|+.++++++...+...+.++|+++++
T Consensus 242 ~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i~~~~~ 320 (358)
T PRK07824 242 GAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEALRAHVA 320 (358)
T ss_pred EEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHHHHHHH
Confidence 999 89999886 999999999999999999999999999999999999887766778888988887
Q ss_pred cc
Q psy4966 146 FP 147 (149)
Q Consensus 146 ~~ 147 (149)
+.
T Consensus 321 ~~ 322 (358)
T PRK07824 321 RT 322 (358)
T ss_pred hh
Confidence 64
No 106
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.88 E-value=7.7e-22 Score=155.26 Aligned_cols=129 Identities=26% Similarity=0.437 Sum_probs=111.3
Q ss_pred eeeeccCCccccc-------ccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCCCe
Q psy4966 2 FLVVGLVGKSKQK-------ATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDDGW 73 (149)
Q Consensus 2 ~~~~g~~e~~~~~-------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~ 73 (149)
+..||+||++... ..++|. |++++.+++.+ |||+++|+. +.||+++++.+.... .++|
T Consensus 268 ~~~YG~tE~~~~~~~~~~~~~~~~G~-~~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~~~~-~~~~ 333 (458)
T PRK09029 268 WCGYGLTEMASTVCAKRADGLAGVGS-PLPGREVKLVD------------GEIWLRGASLALGYWRQGQLVPLVN-DEGW 333 (458)
T ss_pred eccccccccCcceeccCCCCCCCCCC-CCCCCEEEEeC------------CEEEEecCceeeeeecCcccccccc-CCCc
Confidence 5789999986321 235787 99999999987 899999999 999999988876544 6799
Q ss_pred EEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHH
Q psy4966 74 LHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEE 139 (149)
Q Consensus 74 ~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~ 139 (149)
|+|||+|++| +|+++|. +|.|||++|.++++|.+++|++.+++.+|+.++++|+++. ..+.++
T Consensus 334 ~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~--~~~~~~ 410 (458)
T PRK09029 334 FATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDS--EAAVVN 410 (458)
T ss_pred cCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCc--ccCHHH
Confidence 9999999999 9999997 8999999999999999999999999999999999998763 357788
Q ss_pred HHHHhhcc
Q psy4966 140 VKQFVEFP 147 (149)
Q Consensus 140 l~~~l~~~ 147 (149)
|+++|+++
T Consensus 411 l~~~~~~~ 418 (458)
T PRK09029 411 LAEWLQDK 418 (458)
T ss_pred HHHHHHhh
Confidence 88888764
No 107
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.87 E-value=3e-21 Score=160.12 Aligned_cols=141 Identities=23% Similarity=0.183 Sum_probs=112.5
Q ss_pred eeeeccCCccc----------ccccCcCccccCCceEEEEcCCCCccCCCCC--eeEEEEEcCC---CccccCCchhhhc
Q psy4966 2 FLVVGLVGKSK----------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGK--TGELCLKGDV---FLGYRNKVEATKE 66 (149)
Q Consensus 2 ~~~~g~~e~~~----------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~--~Gel~v~~~~---~~gY~~~~~~~~~ 66 (149)
...||+||.+. ...+++|+ |+++++++++| ++|++++.|+ .|||+++++. ..+|+++. ....
T Consensus 501 ~~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~-~~~~ 577 (728)
T PLN03052 501 IEYCGGTELGGGFVTGSLLQPQAFAAFST-PAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGASSTLLNAD-HYKV 577 (728)
T ss_pred EeeccChhhCcccccCCCCCCCCCCcccc-CCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCCCccccCch-hhhh
Confidence 46899999753 22356777 99999999999 8999999985 5999998764 34566653 3444
Q ss_pred ccC------CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHh-cCCCcccEEEEeeecCCCC-CeEE
Q psy4966 67 MLD------DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFR-QHPDVEDVAVIGIPHDVFG-ELPA 124 (149)
Q Consensus 67 ~~~------~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~ 124 (149)
.|. ...||+|||++++|++|+++|+ ++.|||++|. .||+|.+++|++++++..| ++++
T Consensus 578 yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~ 657 (728)
T PLN03052 578 YFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLV 657 (728)
T ss_pred hhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEE
Confidence 442 2239999999999999999997 9999999995 7999999999999998877 8899
Q ss_pred EEEEeC--CCCCCCHHHHHHHhh
Q psy4966 125 AVVVPK--PNSSVTAEEVKQFVE 145 (149)
Q Consensus 125 a~v~~~--~~~~~~~~~l~~~l~ 145 (149)
+||++. ++...+.++|+++++
T Consensus 658 afVvl~~~~g~~~~~~~L~~~i~ 680 (728)
T PLN03052 658 IAAVLKDPPGSNPDLNELKKIFN 680 (728)
T ss_pred EEEEEecCCCCCCCHHHHHHHHH
Confidence 999987 555566667776654
No 108
>PRK05691 peptide synthase; Validated
Probab=99.87 E-value=1.9e-21 Score=182.33 Aligned_cols=143 Identities=24% Similarity=0.303 Sum_probs=119.1
Q ss_pred eeeeccCCcccc--------------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhc
Q psy4966 2 FLVVGLVGKSKQ--------------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKE 66 (149)
Q Consensus 2 ~~~~g~~e~~~~--------------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~ 66 (149)
+..||+||++.. ...++|+ |++++.++|+| ++++++|.|.+|||+|+|+. +.||+++|+.|++
T Consensus 2478 ~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-pi~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~t~~ 2555 (4334)
T PRK05691 2478 FNAYGPTETVVMPLACLAPEQLEEGAASVPIGR-VVGARVAYILD-ADLALVPQGATGELYVGGAGLAQGYHDRPGLTAE 2555 (4334)
T ss_pred EeCcCCCcceEEEEEeecccccccCCCCCcccc-ccCCCEEEEEC-CCCCCCCCCCceEEEecccccCccccCChhhhhh
Confidence 578999998521 1123677 99999999999 88999999999999999999 9999999999999
Q ss_pred ccCC-------CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEE
Q psy4966 67 MLDD-------DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAA 125 (149)
Q Consensus 67 ~~~~-------~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a 125 (149)
.|.. ++||+|||++++++||+++|+ +|.|||++|.+||+|.+++|++..+ ..++.+++
T Consensus 2556 ~F~~~p~~~~~~r~y~TGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~EIE~~l~~~p~V~~a~V~~~~~-~~~~~lva 2634 (4334)
T PRK05691 2556 RFVADPFAADGGRLYRTGDLVRLRADGLVEYVGRIDHQVKIRGFRIELGEIESRLLEHPAVREAVVLALDT-PSGKQLAG 2634 (4334)
T ss_pred hccCCCCCCCCCceEeccceEEEcCCCCEEEeecccCeEEeeeEEechHHHHHHHHhCCCcceEEEEEeeC-CCCcEEEE
Confidence 8853 359999999999999999997 9999999999999999999998854 45788999
Q ss_pred EEEeCCC------CCCCHHHHHHHhhcc
Q psy4966 126 VVVPKPN------SSVTAEEVKQFVEFP 147 (149)
Q Consensus 126 ~v~~~~~------~~~~~~~l~~~l~~~ 147 (149)
+++.... .....+.|+++|++.
T Consensus 2635 ~vv~~~~~~~~~~~~~~~~~l~~~l~~~ 2662 (4334)
T PRK05691 2635 YLVSAVAGQDDEAQAALREALKAHLKQQ 2662 (4334)
T ss_pred EEEecccccccccccccHHHHHHHHHhh
Confidence 9887432 122346788877754
No 109
>KOG1180|consensus
Probab=99.87 E-value=9.6e-22 Score=153.90 Aligned_cols=127 Identities=30% Similarity=0.432 Sum_probs=110.4
Q ss_pred CeeeeccCCccccc---------ccCcCccccCCceEEEEcCCCCccCCCCC--eeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQK---------ATLTGKHFQEHNAIKIIDPVTSVQLPDGK--TGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~~---------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~--~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
|.+.||+||+.... .+.+|. |++.++++++|.++|-=.+.+. .|||+|+|+. ..|||+|++.|++.|
T Consensus 430 v~qGYGLTEtca~~tv~e~~d~~~g~vG~-pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~f 508 (678)
T KOG1180|consen 430 VLQGYGLTETCAAATVLEPEDFSTGRVGA-PLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDF 508 (678)
T ss_pred ccccccccchhcccEecChhhcccccccC-CccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhc
Confidence 57899999997643 345777 9999999999997774444444 7999999999 999999999999999
Q ss_pred CC-CC--eEEcCceEEEcCCCeEEEE---------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 69 DD-DG--WLHTGDLAYRLPDGTHFII---------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 69 ~~-~~--~~~TGD~~~~~~~G~~~i~---------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
.. +| ||+|||+|++.+||.|.|+ +++.||.++...|-|...+|++-..... ++++|+++
T Consensus 509 t~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~s~---~VaiVVPn 585 (678)
T KOG1180|consen 509 TVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNKSK---PVAIVVPN 585 (678)
T ss_pred eecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEecccccce---eEEEEcCC
Confidence 76 78 9999999999999999997 9999999999999999999998666544 99999976
Q ss_pred C
Q psy4966 131 P 131 (149)
Q Consensus 131 ~ 131 (149)
.
T Consensus 586 ~ 586 (678)
T KOG1180|consen 586 Q 586 (678)
T ss_pred c
Confidence 4
No 110
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.86 E-value=6.5e-21 Score=164.11 Aligned_cols=136 Identities=21% Similarity=0.213 Sum_probs=111.4
Q ss_pred eeeeccCCccc---------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCC
Q psy4966 2 FLVVGLVGKSK---------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDD 71 (149)
Q Consensus 2 ~~~~g~~e~~~---------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~ 71 (149)
+..||+||++. ....++|+ |+|++++++.+ ..+ .++.|||+++|+. +.||++++.........+
T Consensus 936 ~~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~~g~~~~~~~-~~~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~ 1009 (1140)
T PRK06814 936 LEGYGVTETAPVIALNTPMHNKAGTVGR-LLPGIEYRLEP-VPG----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPAD 1009 (1140)
T ss_pred EeccccccccceEEecCCCCCCCCcCCc-cCCCCeEEEee-cCC----CCCceEEEEeCCCcchhhcCCCCCCccccCCC
Confidence 57899999863 23457888 99999999987 433 3678999999999 999998765433222358
Q ss_pred CeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCH
Q psy4966 72 GWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTA 137 (149)
Q Consensus 72 ~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~ 137 (149)
|||+|||++++|+||++++. +|.|||++|.+|+.+.+++|++++++..|+.+++++. ....+.
T Consensus 1010 g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~---~~~~~~ 1086 (1140)
T PRK06814 1010 GWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTT---ASDATR 1086 (1140)
T ss_pred CeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEc---CCCcCH
Confidence 99999999999999999997 8999999999999999999999999999998877654 234667
Q ss_pred HHHHHHhhc
Q psy4966 138 EEVKQFVEF 146 (149)
Q Consensus 138 ~~l~~~l~~ 146 (149)
+++.+++++
T Consensus 1087 ~~l~~~~~~ 1095 (1140)
T PRK06814 1087 AAFLAHAKA 1095 (1140)
T ss_pred HHHHHHHHH
Confidence 888888875
No 111
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.86 E-value=1.5e-21 Score=159.24 Aligned_cols=111 Identities=23% Similarity=0.290 Sum_probs=93.4
Q ss_pred eeeeccCCcccc---------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCC
Q psy4966 2 FLVVGLVGKSKQ---------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDD 71 (149)
Q Consensus 2 ~~~~g~~e~~~~---------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~ 71 (149)
+..||+||++.. ...++|+ |+|++++++++ .|+.|||+++|+. +.|||++|+.+.+.|..+
T Consensus 381 ~~~YG~TE~~~~~~~~~~~~~~~~svG~-p~pg~~v~i~~--------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~d 451 (624)
T PRK12582 381 YTGYGATETAPTTTGTHWDTERVGLIGL-PLPGVELKLAP--------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEE 451 (624)
T ss_pred EeccccccccceeecccCCCCCCCCCCc-CCCCcEEEEcc--------CCCceEEEEECCcccccccCCccchhhhcCcc
Confidence 578999998642 2357888 99999999864 4778999999999 999999999999999778
Q ss_pred CeEEcCceEEE-c---CCCeEEEE---------------ChHHH--HHHHhcCCCcccEEEEeeecCCCCC
Q psy4966 72 GWLHTGDLAYR-L---PDGTHFII---------------SPCEL--ESIFRQHPDVEDVAVIGIPHDVFGE 121 (149)
Q Consensus 72 ~~~~TGD~~~~-~---~~G~~~i~---------------~~~eI--E~~l~~~~~V~~~~v~~~~~~~~g~ 121 (149)
|||+|||+|++ | ++|+++|+ ++.+| |.++.+||.|.+++|++.+++..|.
T Consensus 452 gw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g~ 522 (624)
T PRK12582 452 GFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAFIGL 522 (624)
T ss_pred CCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEcCCCCcEEE
Confidence 99999999998 4 46899886 56666 5688999999999999997776443
No 112
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.86 E-value=2.5e-20 Score=148.41 Aligned_cols=145 Identities=24% Similarity=0.324 Sum_probs=120.6
Q ss_pred CeeeeccCCcccccc-------cCcC-ccccCCceEEEEcCCCCccCCCCCe--eEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSKQKA-------TLTG-KHFQEHNAIKIIDPVTSVQLPDGKT--GELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~~~-------~~~g-~~p~~~~~~~i~d~~~g~~~~~g~~--Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||.+.... ...| ..+.++..+++++ ++++++++|.. |+|+. ++. +.||++++..++..|.
T Consensus 325 ~~~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~~-~~~~~~gy~~~~~~t~~~f~ 402 (533)
T PRK07798 325 LTDSIGSSETGFGGSGTVAKGAVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIAR-RGHIPLGYYKDPEKTAETFP 402 (533)
T ss_pred EEeeecccccccccccCCCCCCccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEEe-ecCccccccCChhhhHHhhc
Confidence 357899999753221 1233 1377899999999 78889999988 76664 556 9999999999988874
Q ss_pred C---CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCC
Q psy4966 70 D---DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPN 132 (149)
Q Consensus 70 ~---~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~ 132 (149)
. .+||+|||++++|++|++++. ++.+||++|.+++.|.++++++.++..+|+.+.+++++.++
T Consensus 403 ~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 482 (533)
T PRK07798 403 TIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREG 482 (533)
T ss_pred cCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCC
Confidence 2 369999999999999999997 89999999999999999999999988889999999998877
Q ss_pred CCCCHHHHHHHhhcc
Q psy4966 133 SSVTAEEVKQFVEFP 147 (149)
Q Consensus 133 ~~~~~~~l~~~l~~~ 147 (149)
...+.++|+++|++.
T Consensus 483 ~~~~~~~l~~~l~~~ 497 (533)
T PRK07798 483 ARPDLAELRAHCRSS 497 (533)
T ss_pred CCCCHHHHHHHHhhh
Confidence 777888999988764
No 113
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.85 E-value=1.9e-20 Score=151.99 Aligned_cols=145 Identities=19% Similarity=0.255 Sum_probs=110.0
Q ss_pred CeeeeccCCcccc------cccCcCccccC----Cce---------EEEEcCCCC--ccCCCCCeeEEE--EEcCC-Ccc
Q psy4966 1 MFLVVGLVGKSKQ------KATLTGKHFQE----HNA---------IKIIDPVTS--VQLPDGKTGELC--LKGDV-FLG 56 (149)
Q Consensus 1 ~~~~~g~~e~~~~------~~~~~g~~p~~----~~~---------~~i~d~~~g--~~~~~g~~Gel~--v~~~~-~~g 56 (149)
++..||+||.+.. ...++|. +.+ +.. ..+.+ .++ .++++|+.|||+ ++++. +.|
T Consensus 341 l~~~YG~tE~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~~~i~~~~~~~G 418 (600)
T PRK08279 341 ILEFYAASEGNVGFINVFNFDGTVGR-VPLWLAHPYAIVKYDVDTGEPVRD-ADGRCIKVKPGEVGLLIGRITDRGPFDG 418 (600)
T ss_pred eeeeecccccceeecccCCCCccccc-ccccccccceeeeeccCcCceeeC-CCCccccCCCCCceeEEEEecCcccccc
Confidence 4678999997632 2245665 333 222 22333 223 357889999998 67888 999
Q ss_pred ccCCchhhhcccC------CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeec
Q psy4966 57 YRNKVEATKEMLD------DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPH 116 (149)
Q Consensus 57 Y~~~~~~~~~~~~------~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~ 116 (149)
| +++..+...|. .++||+|||+|+++++|++++. +|.|||++|.++|+|.+|+|+++++
T Consensus 419 Y-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~ 497 (600)
T PRK08279 419 Y-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYGVEV 497 (600)
T ss_pred c-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEEeec
Confidence 9 88888877652 3689999999999999999997 8999999999999999999999987
Q ss_pred CCC-CCeEEEEEEeCCCCCCCHHHHHHHhhccc
Q psy4966 117 DVF-GELPAAVVVPKPNSSVTAEEVKQFVEFPR 148 (149)
Q Consensus 117 ~~~-g~~~~a~v~~~~~~~~~~~~l~~~l~~~~ 148 (149)
+.. +...++++++.++...+.++++++|+++.
T Consensus 498 ~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L 530 (600)
T PRK08279 498 PGTDGRAGMAAIVLADGAEFDLAALAAHLYERL 530 (600)
T ss_pred CCCCCccceeEEEecCCccCCHHHHHHHHHhhC
Confidence 764 45566677776666778889999988653
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.84 E-value=3.1e-20 Score=149.01 Aligned_cols=112 Identities=23% Similarity=0.318 Sum_probs=92.4
Q ss_pred cCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE---
Q psy4966 16 TLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII--- 91 (149)
Q Consensus 16 ~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~--- 91 (149)
.++|+ |+++++++++| ++++++++|+.|||+++|+. +.||++++.... .+..++||+|||+++++++|+++++
T Consensus 360 ~~~G~-~~~g~~~~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~ 436 (545)
T PRK07768 360 ATLGP-PLPGLEVRVVD-EDGQVLPPRGVGVIELRGESVTPGYLTMDGFIP-AQDADGWLDTGDLGYLTEEGEVVVCGRV 436 (545)
T ss_pred EeccC-CCCCCEEEEEC-CCCCCCCCCCEEEEEEccCcccccccCCCCCcc-cccCCCeeeccceEEEecCCEEEEEccc
Confidence 35777 99999999999 88999999999999999999 999998654443 3346789999999999999999987
Q ss_pred -----------ChHHHHHHHhcCCCcccEEEEeee--cCCCCCeEEEEEEeC
Q psy4966 92 -----------SPCELESIFRQHPDVEDVAVIGIP--HDVFGELPAAVVVPK 130 (149)
Q Consensus 92 -----------~~~eIE~~l~~~~~V~~~~v~~~~--~~~~g~~~~a~v~~~ 130 (149)
++.|||++|.++++|.+++|+++. +...++.+++++...
T Consensus 437 ~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~ 488 (545)
T PRK07768 437 KDVIIMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESN 488 (545)
T ss_pred cceEEECCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEec
Confidence 899999999999999998877664 344455555555443
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.83 E-value=1.5e-19 Score=140.97 Aligned_cols=137 Identities=24% Similarity=0.469 Sum_probs=112.1
Q ss_pred CeeeeccCCcccccc----------cCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 1 MFLVVGLVGKSKQKA----------TLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 1 ~~~~~g~~e~~~~~~----------~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
++..||+||.+.... .++|. |++++++++...+. ++.|||+++|+. +.||++++..+...+
T Consensus 246 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~~~~~------~~~Gel~v~~~~~~~gy~~~~~~~~~~~- 317 (436)
T TIGR01923 246 IYLSYGMTETCSQVTTATPEMLHARPDVGR-PLAGREIKIKVDNK------EGHGEIMVKGANLMKGYLYQGELTPAFE- 317 (436)
T ss_pred eeeEecCCccchhccCcCccccccccCCCc-cCCCcEEEEEeCCC------CCceEEEEECCccchhhCCChhhhhhhh-
Confidence 367899999864211 23777 99999999844122 267999999999 999999888776655
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSV 135 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~ 135 (149)
.++||+|||+++++++|++++. ++.+||++|..++.|.++++++.++...+..+++++++..+ .
T Consensus 318 ~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--~ 395 (436)
T TIGR01923 318 QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESD--I 395 (436)
T ss_pred cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCC--C
Confidence 5799999999999999999986 89999999999999999999999888878888899887753 5
Q ss_pred CHHHHHHHhhcc
Q psy4966 136 TAEEVKQFVEFP 147 (149)
Q Consensus 136 ~~~~l~~~l~~~ 147 (149)
+.+.+.++|++.
T Consensus 396 ~~~~l~~~l~~~ 407 (436)
T TIGR01923 396 SQAKLIAYLTEK 407 (436)
T ss_pred CHHHHHHHHHHh
Confidence 677777777653
No 116
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.82 E-value=3e-20 Score=143.61 Aligned_cols=109 Identities=28% Similarity=0.410 Sum_probs=95.2
Q ss_pred CeeeeccCCccccc--------------ccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhh
Q psy4966 1 MFLVVGLVGKSKQK--------------ATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATK 65 (149)
Q Consensus 1 ~~~~~g~~e~~~~~--------------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~ 65 (149)
++..||+||.+... ..++|. |+++++++|++ ++++.++.|+.|||+++++. +.||+++++.+.
T Consensus 263 i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~ 340 (408)
T TIGR01733 263 LINLYGPTETTVWSTATLVDADDAPRESPVPIGR-PLANTRLYVLD-DDLRPVPVGVVGELYIGGPGVARGYLNRPELTA 340 (408)
T ss_pred EEecccCCceEEEEEEEEcCccccCCccccccCc-ccCCceEEEEC-CCCCCCCCCCceEEEecCccccccccCChhhhh
Confidence 35789999986422 456888 99999999999 55999999999999999999 999999999998
Q ss_pred cccCCC------C--eEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEE
Q psy4966 66 EMLDDD------G--WLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAV 111 (149)
Q Consensus 66 ~~~~~~------~--~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v 111 (149)
..|..+ + ||+|||++++|++|++++. +|.+||++|..++.|.+++|
T Consensus 341 ~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 341 ERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred cceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 877432 2 9999999999999999887 89999999999999999875
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.77 E-value=7.4e-19 Score=136.39 Aligned_cols=90 Identities=37% Similarity=0.575 Sum_probs=79.7
Q ss_pred CeeeeccCCcccc-----------cccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhccc
Q psy4966 1 MFLVVGLVGKSKQ-----------KATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEML 68 (149)
Q Consensus 1 ~~~~~g~~e~~~~-----------~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~ 68 (149)
++..||+||.+.. ...++|. |+|+++++|+|+++++++++|+.|||+++|+. +.||+++++.+.+.|
T Consensus 306 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~ 384 (417)
T PF00501_consen 306 IINLYGSTETGSIATIRPPEDDIEKPGSVGK-PLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAF 384 (417)
T ss_dssp EEEEEEEGGGSSEEEEEETTTHHSSTTSEBE-ESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHE
T ss_pred ceecccccccceeeecccccccccccccccc-cccccccccccccccccccccccccccccCCccceeeecccccccccc
Confidence 3678999998753 2345787 99999999999666999999999999999999 999999999999999
Q ss_pred CCCCeEEcCceEEEcCCCeEEEE
Q psy4966 69 DDDGWLHTGDLAYRLPDGTHFII 91 (149)
Q Consensus 69 ~~~~~~~TGD~~~~~~~G~~~i~ 91 (149)
..+|||+|||+|++|++|+++++
T Consensus 385 ~~~~~~~TGD~g~~d~~G~~~~~ 407 (417)
T PF00501_consen 385 IDDGWYRTGDLGRLDEDGYLYIL 407 (417)
T ss_dssp ETTSEEEEEEEEEEETTSEEEEE
T ss_pred ccccceecceEEEECCCCeEEEE
Confidence 76689999999999999999986
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.74 E-value=5.1e-17 Score=126.62 Aligned_cols=120 Identities=20% Similarity=0.242 Sum_probs=99.5
Q ss_pred CeeeeccCCccc-------ccccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCCCccccCCchhhhcccCCCCe
Q psy4966 1 MFLVVGLVGKSK-------QKATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDVFLGYRNKVEATKEMLDDDGW 73 (149)
Q Consensus 1 ~~~~~g~~e~~~-------~~~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~~~gY~~~~~~~~~~~~~~~~ 73 (149)
++..||+||++. ....++|+ |+|++++++.+ + .++.|||++++ .++|
T Consensus 239 ~~~~YG~tE~~~~~~~~~~~~~~~~G~-p~~~~~~~~~~-~------~~~~gel~v~~------------------~~~~ 292 (414)
T PRK08308 239 MMQQYGCSEAGCVSICPDMKSHLDLGN-PLPHVSVSAGS-D------ENAPEEIVVKM------------------GDKE 292 (414)
T ss_pred hhhccCccccCCeeecCCCCCCCccCc-cCCCeEEEEec-C------CCCCceEEEEc------------------CCce
Confidence 356899999863 23346788 99999999876 3 25679999953 2589
Q ss_pred EEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHH
Q psy4966 74 LHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEE 139 (149)
Q Consensus 74 ~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~ 139 (149)
|+|||+++++++|+++++ +|.|||++|.++++|.+++|++.+++..|+.+.++++... ..+.++
T Consensus 293 ~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~--~~~~~~ 370 (414)
T PRK08308 293 IFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHE--EIDPVQ 370 (414)
T ss_pred EECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCC--CCCHHH
Confidence 999999999999999986 8999999999999999999999999998999999888764 467788
Q ss_pred HHHHhhccc
Q psy4966 140 VKQFVEFPR 148 (149)
Q Consensus 140 l~~~l~~~~ 148 (149)
++++|+++.
T Consensus 371 l~~~l~~~l 379 (414)
T PRK08308 371 LREWCIQHL 379 (414)
T ss_pred HHHHHHHhC
Confidence 888887643
No 119
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.62 E-value=4.7e-15 Score=114.15 Aligned_cols=75 Identities=20% Similarity=0.283 Sum_probs=68.0
Q ss_pred CCCeEEcCceEEE-cCCCeEEEE------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCC
Q psy4966 70 DDGWLHTGDLAYR-LPDGTHFII------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVT 136 (149)
Q Consensus 70 ~~~~~~TGD~~~~-~~~G~~~i~------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~ 136 (149)
.+|||+|||+|++ |++|+|+|. +|. ||++|.+||+|.+|+|++++++.+|+.++|+|++.+ ..+
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~--~~~ 283 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEGTGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL--PAD 283 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCcCCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC--CCC
Confidence 6899999999998 799999995 677 999999999999999999999999999999999874 467
Q ss_pred HHHHHHHhhcc
Q psy4966 137 AEEVKQFVEFP 147 (149)
Q Consensus 137 ~~~l~~~l~~~ 147 (149)
.++|+++|++.
T Consensus 284 ~~el~~~l~~~ 294 (365)
T PRK09188 284 EKSLRARLAGA 294 (365)
T ss_pred HHHHHHHHHhh
Confidence 78999998875
No 120
>KOG1179|consensus
Probab=99.57 E-value=5.8e-14 Score=110.90 Aligned_cols=145 Identities=24% Similarity=0.277 Sum_probs=110.2
Q ss_pred CeeeeccCCcccccc------cCcCccccC-----CceEE---------EEcCCCC--ccCCCCCeeEEEEE----cCC-
Q psy4966 1 MFLVVGLVGKSKQKA------TLTGKHFQE-----HNAIK---------IIDPVTS--VQLPDGKTGELCLK----GDV- 53 (149)
Q Consensus 1 ~~~~~g~~e~~~~~~------~~~g~~p~~-----~~~~~---------i~d~~~g--~~~~~g~~Gel~v~----~~~- 53 (149)
++..||.||.+.... +.+|+.+.- -.++. ++| ++| .+|++|++|.|+-+ .|.
T Consensus 384 IgE~YgaTEgn~~~~N~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd-~~G~Ci~~~~GEpGlLv~~i~~k~P~~ 462 (649)
T KOG1179|consen 384 IGEFYGATEGNSNLVNYDGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRD-SQGLCIPCPPGEPGLLVGKIVQKNPLR 462 (649)
T ss_pred EEEEeccccCcceeeeecCccccccchhhhhhhccceEEEEecCCCCceeec-CCceEEECCCCCCceEEEEeccCCchh
Confidence 467899999986433 233332221 12222 334 444 46789999976643 353
Q ss_pred -CccccCCchhhhccc------CCCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEE
Q psy4966 54 -FLGYRNKVEATKEML------DDDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVI 112 (149)
Q Consensus 54 -~~gY~~~~~~~~~~~------~~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~ 112 (149)
|.||.++...++++. .+|-||.|||+-.+|+.|++||. ++.|||.+|..+.+++|+.|+
T Consensus 463 ~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~VY 542 (649)
T KOG1179|consen 463 SFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNVY 542 (649)
T ss_pred hhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeEE
Confidence 999999888877765 24569999999999999999998 999999999999999999999
Q ss_pred eeecCC-CCCeEEEEEEeCCCCCCCHHHHHHHhhc
Q psy4966 113 GIPHDV-FGELPAAVVVPKPNSSVTAEEVKQFVEF 146 (149)
Q Consensus 113 ~~~~~~-~g~~~~a~v~~~~~~~~~~~~l~~~l~~ 146 (149)
++.-+. .|..-+|.|++.+....|.+.+..++++
T Consensus 543 GV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~ 577 (649)
T KOG1179|consen 543 GVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRE 577 (649)
T ss_pred EEecCCccCccceEEEEecCcccchHHHHHHHHHh
Confidence 998887 4677888888888888888888887765
No 121
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.49 E-value=5.2e-13 Score=104.64 Aligned_cols=118 Identities=28% Similarity=0.260 Sum_probs=83.3
Q ss_pred eeeeccCCccc-ccc-----cCcCccccC--CceEEEEcCCCCccCCCCCeeEEEEEcCCCccccCCchhhhcccCCCCe
Q psy4966 2 FLVVGLVGKSK-QKA-----TLTGKHFQE--HNAIKIIDPVTSVQLPDGKTGELCLKGDVFLGYRNKVEATKEMLDDDGW 73 (149)
Q Consensus 2 ~~~~g~~e~~~-~~~-----~~~g~~p~~--~~~~~i~d~~~g~~~~~g~~Gel~v~~~~~~gY~~~~~~~~~~~~~~~~ 73 (149)
+..||++|... ... ...|. +++ +..++|+|+++++++++|+.|||++++.. ...+ ..+|
T Consensus 224 ~~~YG~tE~~~~~~~~~~~~~~~g~-~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~-----------~~~~-p~~r 290 (422)
T TIGR02155 224 TDIYGLSEVIGPGVAMECVETQDGL-HIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLT-----------KEAL-PVIR 290 (422)
T ss_pred EecccchhhcCCceeecccccCCCc-eEecCeeEEEEECCCCCCCCCCCCeeEEEEecCC-----------cccc-ceee
Confidence 56899999731 111 11233 443 46778999778999999999999998743 1223 3579
Q ss_pred EEcCceEEEcCC-C-----eEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCC
Q psy4966 74 LHTGDLAYRLPD-G-----THFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPN 132 (149)
Q Consensus 74 ~~TGD~~~~~~~-G-----~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~ 132 (149)
|+|||+++++++ | .++|. +|.+||.+|..||+|...+.+........+.+.+.|+...+
T Consensus 291 y~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~ 369 (422)
T TIGR02155 291 YRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPE 369 (422)
T ss_pred EEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecC
Confidence 999999999775 4 23333 89999999999999986666666555545667777776543
No 122
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.34 E-value=2.9e-12 Score=104.98 Aligned_cols=101 Identities=28% Similarity=0.341 Sum_probs=87.5
Q ss_pred eeeeccCCccccc-----------ccCcCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC
Q psy4966 2 FLVVGLVGKSKQK-----------ATLTGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD 69 (149)
Q Consensus 2 ~~~~g~~e~~~~~-----------~~~~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~ 69 (149)
+..||.||+.... ..+.|+ |++++++.++| ..++.+|.|..|||++.|.. +.||+++|+.|+..|.
T Consensus 516 ~~~ygpTe~~~~~~~~~~~~~~~~~~piG~-p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~ 593 (642)
T COG1020 516 LNLYGPTEATLDAPSFPISAELESRVPIGR-PVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFI 593 (642)
T ss_pred eeccCccHHhhheeeEEcccccCCCCCcce-eeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhh
Confidence 4668888854311 235777 99999999999 89999999999999999999 9999999999999996
Q ss_pred CCCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCC
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHP 104 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~ 104 (149)
.+.+|+|||+++..++|.+.++ .+.|||.++..+|
T Consensus 594 ~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 594 ALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 5459999999999999999886 8999999998775
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.29 E-value=3.9e-11 Score=93.40 Aligned_cols=71 Identities=23% Similarity=0.200 Sum_probs=57.8
Q ss_pred CeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCC-
Q psy4966 72 GWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVT- 136 (149)
Q Consensus 72 ~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~- 136 (149)
.|+.|||++++|++|+|+|+ +|.+||++|.+||+|.+++|.. .|++++++|+++++...+
T Consensus 275 ~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~ 349 (386)
T TIGR02372 275 RRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAE 349 (386)
T ss_pred ceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHH
Confidence 37899999999999999997 9999999999999999998852 467899999988654333
Q ss_pred -HHHHHHHhhcc
Q psy4966 137 -AEEVKQFVEFP 147 (149)
Q Consensus 137 -~~~l~~~l~~~ 147 (149)
.++|++++++.
T Consensus 350 ~~~~l~~~~~~~ 361 (386)
T TIGR02372 350 LEIELRATAARH 361 (386)
T ss_pred HHHHHHHHHHHh
Confidence 35677766654
No 124
>PTZ00297 pantothenate kinase; Provisional
Probab=98.84 E-value=3.3e-08 Score=87.35 Aligned_cols=113 Identities=20% Similarity=0.159 Sum_probs=81.7
Q ss_pred eeeeccCCccc----ccccCcCccccCCceEEEEcC-CCCccCCCCCeeEEEEEcCCCccccCCchhhhcccCCCCeEEc
Q psy4966 2 FLVVGLVGKSK----QKATLTGKHFQEHNAIKIIDP-VTSVQLPDGKTGELCLKGDVFLGYRNKVEATKEMLDDDGWLHT 76 (149)
Q Consensus 2 ~~~~g~~e~~~----~~~~~~g~~p~~~~~~~i~d~-~~g~~~~~g~~Gel~v~~~~~~gY~~~~~~~~~~~~~~~~~~T 76 (149)
..+|+++|... ......|+ |+|+++++|.+. +.+.. +..|||+++ |+++|+.|.+.+ ++|+..
T Consensus 782 ~~g~glTE~~~~~~~~~~~~~G~-PlpgvEvKI~~~~E~~~~---~~~GEIlvr------~~kdpe~T~e~~--~gW~~d 849 (1452)
T PTZ00297 782 CYVPCLREVFFLPSEGVFCVDGT-PAPSLQVDLEPFDEPSDG---AGIGQLVLA------KKGEPRRTLPIA--AQWKRD 849 (1452)
T ss_pred EEecceEEeeeecCCCCcccCCe-ecCceEEEEcccccccCC---CCCCeEEEE------ECCChHHHHHhh--CcCccC
Confidence 34667776432 11112265 999999999873 22222 235999995 557899998854 689877
Q ss_pred CceEEEcCCCeEEEE------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 77 GDLAYRLPDGTHFII------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 77 GD~~~~~~~G~~~i~------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
|.+-.+|.-..+.++ +|+.||+.+..+|.|.+++|++-..+. ++|+|+++
T Consensus 850 G~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k~----lvALVvpd 905 (1452)
T PTZ00297 850 RTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSRP----IIAIVSPN 905 (1452)
T ss_pred CeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCCc----eEEEEEeC
Confidence 777777776666665 999999999999999999999864432 88888875
No 125
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.78 E-value=1.3e-08 Score=60.98 Aligned_cols=47 Identities=40% Similarity=0.697 Sum_probs=42.8
Q ss_pred HHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHHHHHHhhcc
Q psy4966 95 ELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 95 eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
|||++|.+||+|.+|+|++.+++.+|+.++|++++ +.++|+++|+++
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~------~~~~i~~~~~~~ 47 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL------DEEEIRDHLRDK 47 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE------HHHHHHHHHHHH
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe------eecccccchhhh
Confidence 79999999999999999999999999999999998 448888888764
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=98.56 E-value=2.5e-06 Score=67.72 Aligned_cols=122 Identities=16% Similarity=0.084 Sum_probs=69.5
Q ss_pred eeeeccCCccccc-c-cCcCccccC--CceEEEEcCCCCccCCCCCeeEEEEEcCCCccccCCchhhhcccCCCCeEEcC
Q psy4966 2 FLVVGLVGKSKQK-A-TLTGKHFQE--HNAIKIIDPVTSVQLPDGKTGELCLKGDVFLGYRNKVEATKEMLDDDGWLHTG 77 (149)
Q Consensus 2 ~~~~g~~e~~~~~-~-~~~g~~p~~--~~~~~i~d~~~g~~~~~g~~Gel~v~~~~~~gY~~~~~~~~~~~~~~~~~~TG 77 (149)
+..||+||.+... . ...|. .++ ...++|+||+++.++|+|+.|||++.+-.-.++ . ..+ .==-|+||
T Consensus 233 ~~~YG~TE~~~~~~c~~~~g~-h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~~-----r--~~~-PliRYrtg 303 (445)
T TIGR03335 233 YNTYGSTEGTMCGECQAVAGL-HVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPGE-----R--CGS-LLINYDTE 303 (445)
T ss_pred EecCChhhhhheEEecCCCCc-cccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCCc-----c--CCc-eEEEeecC
Confidence 5689999975211 1 12344 443 478999997777889999999999966430000 0 000 00137899
Q ss_pred ceEEEcC-----CCeE--------------EEE----ChHHHHHHHhcC---CCcccEEEEeeecCCCCC-eEEEEEEeC
Q psy4966 78 DLAYRLP-----DGTH--------------FII----SPCELESIFRQH---PDVEDVAVIGIPHDVFGE-LPAAVVVPK 130 (149)
Q Consensus 78 D~~~~~~-----~G~~--------------~i~----~~~eIE~~l~~~---~~V~~~~v~~~~~~~~g~-~~~a~v~~~ 130 (149)
|++++.. .|.- .|. +|.+||++|.++ +++....-+.+.....++ .+...|...
T Consensus 304 D~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~e~~ 383 (445)
T TIGR03335 304 DTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGEITLRVSLECE 383 (445)
T ss_pred ceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCCceEEEEEEec
Confidence 9888621 1321 111 999999999994 555444433332222222 344445554
Q ss_pred CC
Q psy4966 131 PN 132 (149)
Q Consensus 131 ~~ 132 (149)
+.
T Consensus 384 ~~ 385 (445)
T TIGR03335 384 DK 385 (445)
T ss_pred Cc
Confidence 43
No 127
>KOG3628|consensus
Probab=98.48 E-value=1.6e-06 Score=73.79 Aligned_cols=107 Identities=21% Similarity=0.319 Sum_probs=78.6
Q ss_pred CccccCCceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchh-hhccc---------CCCCeEEcCceEEEc----
Q psy4966 19 GKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEA-TKEML---------DDDGWLHTGDLAYRL---- 83 (149)
Q Consensus 19 g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~-~~~~~---------~~~~~~~TGD~~~~~---- 83 (149)
|. ..+++++.|++|++-.+|.+|+.||||+.|.. +.+|++-.+. ....| .+..|-||||+|++.
T Consensus 1156 G~-~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~ 1234 (1363)
T KOG3628|consen 1156 GK-LPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSL 1234 (1363)
T ss_pred Cc-ccccceeEEeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeec
Confidence 45 66899999999999999999999999999998 8877754221 11111 134699999999983
Q ss_pred --CCC----eEEEE--------------ChHHHHHHH-hcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 84 --PDG----THFII--------------SPCELESIF-RQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 84 --~~G----~~~i~--------------~~~eIE~~l-~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
..+ .+|++ +|.+||+.+ ..|+.|..|+|+-. +..++.++.+..
T Consensus 1235 t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~-----~glvVvviE~~g 1298 (1363)
T KOG3628|consen 1235 TDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQA-----TGLVVVVIECHG 1298 (1363)
T ss_pred ccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEee-----CCeEEEEEEecC
Confidence 222 34444 899999988 66999999999864 334566666554
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=98.37 E-value=1.1e-05 Score=63.49 Aligned_cols=118 Identities=28% Similarity=0.315 Sum_probs=77.9
Q ss_pred eeeeccCCcccccccCc----Ccccc--CCceEEEEcCCCCccCCCCCeeEEEEEcCCCccccCCchhhhcccCCCCeEE
Q psy4966 2 FLVVGLVGKSKQKATLT----GKHFQ--EHNAIKIIDPVTSVQLPDGKTGELCLKGDVFLGYRNKVEATKEMLDDDGWLH 75 (149)
Q Consensus 2 ~~~~g~~e~~~~~~~~~----g~~p~--~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~~~gY~~~~~~~~~~~~~~~~~~ 75 (149)
+.+||++|........| |- .+ +..-+.++||++|+.+++|+.|||++..=. ...+ .-=-|+
T Consensus 239 ~diYGltE~~g~g~~eC~~~~gl-hi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~-----------~~~~-PlIRYr 305 (438)
T COG1541 239 FDIYGLTEGFGPGAGECTERNGL-HIWEDHFIFEIVDPETGEQLPDGERGELVITTLT-----------KEGM-PLIRYR 305 (438)
T ss_pred eeccccccccCCcccccccccCC-CcchhhceeeeecCCcCccCCCCCeeEEEEEecc-----------ccCc-ceEEEE
Confidence 56899999854321111 33 22 457888999999999999999999994322 1111 011489
Q ss_pred cCceEEEcCC----CeEE---------------EE----ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCC
Q psy4966 76 TGDLAYRLPD----GTHF---------------II----SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPN 132 (149)
Q Consensus 76 TGD~~~~~~~----G~~~---------------i~----~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~ 132 (149)
|||+..+.++ |+.. +. +|.+||++|.+.+.+.....+-+.....-+.+..-|.+.++
T Consensus 306 tgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~~~~~d~L~V~vE~~~~ 385 (438)
T COG1541 306 TGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTRNGGLDELTVRVELENE 385 (438)
T ss_pred cCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEecCCCCceEEEEEEecCc
Confidence 9999999752 3221 11 99999999999999984443333333334567777777654
No 129
>KOG1178|consensus
Probab=97.95 E-value=5e-05 Score=65.35 Aligned_cols=77 Identities=22% Similarity=0.337 Sum_probs=65.2
Q ss_pred CCeEEcCceEEEcCCCeEEEE--------------ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCC
Q psy4966 71 DGWLHTGDLAYRLPDGTHFII--------------SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVT 136 (149)
Q Consensus 71 ~~~~~TGD~~~~~~~G~~~i~--------------~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~ 136 (149)
+..|+|||.++.-.+|.+.+. .+.||+.++..||.|.+++++...+...++.+.+|++.+.+.+.+
T Consensus 453 ~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~ 532 (1032)
T KOG1178|consen 453 ARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSV 532 (1032)
T ss_pred hhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCch
Confidence 348999999988888888886 899999999999999999999999999999999999987654333
Q ss_pred -HHHHHHHhhcc
Q psy4966 137 -AEEVKQFVEFP 147 (149)
Q Consensus 137 -~~~l~~~l~~~ 147 (149)
...|+.++++.
T Consensus 533 ~~~~i~~~l~~~ 544 (1032)
T KOG1178|consen 533 LIRDIRNYLKKE 544 (1032)
T ss_pred hHHHHHHhhccc
Confidence 46677777654
No 130
>KOG3628|consensus
Probab=97.40 E-value=0.0013 Score=56.85 Aligned_cols=88 Identities=15% Similarity=0.266 Sum_probs=68.5
Q ss_pred CceEEEEcCCCCccCCCCCeeEEEEEcCC-CccccCCchhhhcccC------------CCCeEEcCceEEEcCCCeEEEE
Q psy4966 25 HNAIKIIDPVTSVQLPDGKTGELCLKGDV-FLGYRNKVEATKEMLD------------DDGWLHTGDLAYRLPDGTHFII 91 (149)
Q Consensus 25 ~~~~~i~d~~~g~~~~~g~~Gel~v~~~~-~~gY~~~~~~~~~~~~------------~~~~~~TGD~~~~~~~G~~~i~ 91 (149)
++.+.+++++..+.|.++++|||||.++. ...||.-+..|+..|. ...|.|||=+|++. .|.++|+
T Consensus 511 ~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl 589 (1363)
T KOG3628|consen 511 DATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVL 589 (1363)
T ss_pred ceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEE
Confidence 57778888788889999999999999999 9999988888877773 12389999999996 5566665
Q ss_pred -------------------------ChHHHHHHHhcCCCcccEEEEe
Q psy4966 92 -------------------------SPCELESIFRQHPDVEDVAVIG 113 (149)
Q Consensus 92 -------------------------~~~eIE~~l~~~~~V~~~~v~~ 113 (149)
.-+-|+.+.+..+.|-+++++-
T Consensus 590 ~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~ 636 (1363)
T KOG3628|consen 590 GLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE 636 (1363)
T ss_pred EechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee
Confidence 2334555666677888888874
No 131
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=95.14 E-value=0.064 Score=33.56 Aligned_cols=43 Identities=21% Similarity=0.251 Sum_probs=32.0
Q ss_pred ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCC
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSS 134 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~ 134 (149)
+|.+||++|.++|++...+.+.+......+.+...|.+.++..
T Consensus 5 fP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~ 47 (96)
T PF14535_consen 5 FPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFS 47 (96)
T ss_dssp -HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCC
T ss_pred CHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccC
Confidence 7999999999999998566555554444577778888887543
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=94.84 E-value=0.26 Score=38.51 Aligned_cols=70 Identities=26% Similarity=0.302 Sum_probs=45.3
Q ss_pred eeeeccCCcccccccC-cCccccCCceEEEEcCCCCccCCCCCeeEEEEEcCCCccccCCchhhhcccCCCCeEEcCceE
Q psy4966 2 FLVVGLVGKSKQKATL-TGKHFQEHNAIKIIDPVTSVQLPDGKTGELCLKGDVFLGYRNKVEATKEMLDDDGWLHTGDLA 80 (149)
Q Consensus 2 ~~~~g~~e~~~~~~~~-~g~~p~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~~~~gY~~~~~~~~~~~~~~~~~~TGD~~ 80 (149)
+-.|||+|-....... -+..+.|.- +.++||.+..++|.|++|-|.+-++....| .+...|.|+|
T Consensus 261 ~~~ygmtEl~s~~~~~~~~~~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~~s~-------------p~~IlTeDlG 326 (365)
T PF04443_consen 261 YDMYGMTELNSQAYECGHGHFHVPPW-VIIRDPETLEPLPPGETGLIQVIDLANTSY-------------PGFILTEDLG 326 (365)
T ss_pred eeeeeccccchhheeCCCCcccCCCe-EEEECCCCCcCCCCCCeeEEEEEcccccCC-------------CcEEEEccee
Confidence 4578888854322111 121133322 778899889999999999999976652222 2446799999
Q ss_pred EEcCC
Q psy4966 81 YRLPD 85 (149)
Q Consensus 81 ~~~~~ 85 (149)
.+..+
T Consensus 327 vl~~~ 331 (365)
T PF04443_consen 327 VLHGD 331 (365)
T ss_pred eecCC
Confidence 87544
No 133
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=75.77 E-value=10 Score=26.17 Aligned_cols=48 Identities=21% Similarity=0.212 Sum_probs=30.6
Q ss_pred ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHHHHHHhh
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEEVKQFVE 145 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~ 145 (149)
-...|++.+.+.++|.+|.|+...+ .+...|.+... ....+.+++.++
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~~-----~a~Vav~~~~~-~~~~~~i~~~V~ 123 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTDD-----NAYVAVDLDFN-RFNTKKIKKKVE 123 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEECC-----EEEEEEEeccc-ccchhHHHHHHH
Confidence 5678999999999999999987633 34444444422 334444444443
No 134
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=70.44 E-value=13 Score=20.55 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=32.0
Q ss_pred ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHHHHHHhhcc
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEEVKQFVEFP 147 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~~~ 147 (149)
....|+++|.++++|..+.+- ...+ .+.|...+.. .+.++|.+.+++.
T Consensus 12 C~~~v~~~l~~~~GV~~v~vd----~~~~---~v~v~~~~~~-~~~~~i~~~i~~~ 59 (62)
T PF00403_consen 12 CAKKVEKALSKLPGVKSVKVD----LETK---TVTVTYDPDK-TSIEKIIEAIEKA 59 (62)
T ss_dssp HHHHHHHHHHTSTTEEEEEEE----TTTT---EEEEEESTTT-SCHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCcEEEEE----CCCC---EEEEEEecCC-CCHHHHHHHHHHh
Confidence 456899999999999887662 2211 1244445443 6778888887764
No 135
>PF11253 DUF3052: Protein of unknown function (DUF3052); InterPro: IPR021412 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=69.51 E-value=12 Score=24.76 Aligned_cols=41 Identities=12% Similarity=0.322 Sum_probs=29.4
Q ss_pred eEEcCce----------EEEcCCCeEEEE----------ChHHHHHHHhcCCCcccEEEEee
Q psy4966 73 WLHTGDL----------AYRLPDGTHFII----------SPCELESIFRQHPDVEDVAVIGI 114 (149)
Q Consensus 73 ~~~TGD~----------~~~~~~G~~~i~----------~~~eIE~~l~~~~~V~~~~v~~~ 114 (149)
|||.+|- ..+.++|.+|++ .+.+|+++.... +..+..++.+
T Consensus 52 WwR~~DgDL~D~LvDa~~~L~d~G~IWvltPK~gr~g~V~~~~I~eaA~ta-GL~~t~~~~v 112 (127)
T PF11253_consen 52 WWRDDDGDLVDALVDARTNLADDGVIWVLTPKAGRPGHVEPSDIREAAPTA-GLVQTKSCAV 112 (127)
T ss_pred EEECCcchHHHHHHHHHhhhcCCCEEEEEccCCCCCCCCCHHHHHHHHhhc-CCeeeeeecc
Confidence 8998774 344688999998 889999886544 5555555554
No 136
>PF00101 RuBisCO_small: Ribulose bisphosphate carboxylase, small chain; InterPro: IPR000894 RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) is a bifunctional enzyme that catalyses both the carboxylation and oxygenation of ribulose-1,5-bisphosphate (RuBP) [], thus fixing carbon dioxide as the first step of the Calvin cycle. RuBisCO is the major protein in the stroma of chloroplasts, and in higher plants exists as a complex of 8 large and 8 small subunits. The function of the small subunit is unknown []. While the large subunit is coded for by a single gene, the small subunit is coded for by several different genes, which are distributed in a tissue specific manner. They are transcriptionally regulated by light receptor phytochrome [], which results in RuBisCO being more abundant during the day when it is required. The RuBisCo small subunit consists of a central four-stranded beta-sheet, with two helices packed against it [].; PDB: 1BWV_W 1IWA_P 3AXM_X 1WDD_S 3AXK_T 1IR2_K 1RBL_N 1UZH_J 1RSC_P 1UW9_C ....
Probab=66.82 E-value=19 Score=22.72 Aligned_cols=38 Identities=29% Similarity=0.447 Sum_probs=28.8
Q ss_pred ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCC
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKP 131 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~ 131 (149)
-+.|||+.+..||+ .-+-++|.... .-.+++.+++-++
T Consensus 61 Vl~el~~c~~~~p~-~yVRlig~D~~-~q~r~~~~iVqRP 98 (99)
T PF00101_consen 61 VLAELEACLAEHPG-EYVRLIGFDNK-RQRRVLEFIVQRP 98 (99)
T ss_dssp HHHHHHHHHHHSTT-SEEEEEEEETT-TTEEEEEEEEEGG
T ss_pred HHHHHHHHHHhCCC-ceEEEEEEcCc-ccEEEEEEEEECC
Confidence 56789999999998 66777887444 4567888888664
No 137
>cd00307 RuBisCO_small_like Ribulose bisphosphate carboxylase/oxygenase (Rubisco), small subunit and related proteins. Rubisco is a bifunctional enzyme catalyzes the initial steps of two opposing metabolic pathways: photosynthetic carbon fixation and the competing process of photorespiration. Rubisco Form I, present in plants and green algae, is composed of eight large and eight small subunits. The nearly identical small subunits are encoded by a family of nuclear genes. After translation, the small subunits are translocated across the chloroplast membrane, where an N-terminal signal peptide is cleaved off. While the large subunits contain the catalytic activities, it has been shown that the small subunits are important for catalysis by enhancing the catalytic rate through inducing conformational changes in the large subunits. This superfamily also contains specific proteins from cyanobacteria. CcmM plays a role in a CO2 concentrating mechanism, which cyanobacteria need to to overcome t
Probab=63.48 E-value=32 Score=21.05 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=28.1
Q ss_pred ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
-+.|||+.+..+|+ .-+-++|. |+..-.+++.+++-+
T Consensus 47 Vl~el~~c~~~~p~-~YVRlig~-D~~~q~~~~~fIv~R 83 (84)
T cd00307 47 VLAALEACLAEHPG-EYVRLIGI-DPKAKRRVLEIIIQR 83 (84)
T ss_pred HHHHHHHHHHHCCC-CeEEEEEE-eCCccEEEEEEEeeC
Confidence 46799999999998 66667777 444567778888755
No 138
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=61.00 E-value=20 Score=24.67 Aligned_cols=23 Identities=22% Similarity=0.140 Sum_probs=19.3
Q ss_pred ChHHHHHHHhcCCCcccEEEEee
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGI 114 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~ 114 (149)
-...|.+.+.++|+|.+|.++..
T Consensus 55 ~A~~Ia~~v~~v~~V~dA~vvVt 77 (158)
T TIGR02898 55 VADEIASEAAKVKGVKDATVVIT 77 (158)
T ss_pred HHHHHHHHHhcCCCCceEEEEEE
Confidence 35678888899999999999866
No 139
>cd03527 RuBisCO_small Ribulose bisphosphate carboxylase/oxygenase (Rubisco), small subunit. Rubisco is a bifunctional enzyme catalyzes the initial steps of two opposing metabolic pathways: photosynthetic carbon fixation and the competing process of photorespiration. Rubisco Form I, present in plants and green algae, is composed of eight large and eight small subunits. The nearly identical small subunits are encoded by a family of nuclear genes. After translation, the small subunits are translocated across the chloroplast membrane, where an N-terminal signal peptide is cleaved off. While the large subunits contain the catalytic activities, it has been shown that the small subunits are important for catalysis by enhancing the catalytic rate through inducing conformational changes in the large subunits.
Probab=60.70 E-value=36 Score=21.52 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=27.9
Q ss_pred ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK 130 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~ 130 (149)
-+.|||+.+.++|+ +-+-++|. |+..-.+.+.+++-+
T Consensus 62 Vl~ei~~C~~~~p~-~YVRliG~-D~~~q~~~~~fIv~R 98 (99)
T cd03527 62 VLREIEACRKAYPD-HYVRVVGF-DNYKQSQCMSFIVHR 98 (99)
T ss_pred HHHHHHHHHHHCCC-CeEEEEEE-eCCccEEEEEEEeeC
Confidence 57899999999998 66667777 444556778888755
No 140
>COG4451 RbcS Ribulose bisphosphate carboxylase small subunit [Energy production and conversion]
Probab=56.00 E-value=56 Score=21.47 Aligned_cols=39 Identities=28% Similarity=0.384 Sum_probs=30.1
Q ss_pred ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCC
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPN 132 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~ 132 (149)
-+.|+|+.+..||+ .-+-+++. |+..-.+++-||+-+++
T Consensus 69 vlaele~Cr~dhp~-eYIRliGf-Dp~gkrrv~sfIVhRPn 107 (127)
T COG4451 69 VLAELEACRADHPG-EYIRLIGF-DPKGKRRVVSFIVHRPN 107 (127)
T ss_pred HHHHHHHHHHhCCC-CeEEEEEe-cCCCceEEEEEEEECCC
Confidence 68899999999997 55667776 55545678889988765
No 141
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=55.87 E-value=4.2 Score=23.71 Aligned_cols=7 Identities=57% Similarity=1.284 Sum_probs=6.2
Q ss_pred CeEEcCc
Q psy4966 72 GWLHTGD 78 (149)
Q Consensus 72 ~~~~TGD 78 (149)
-||.|||
T Consensus 73 hwydtgd 79 (80)
T PF05452_consen 73 HWYDTGD 79 (80)
T ss_pred ccccCCC
Confidence 4999998
No 142
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=47.98 E-value=26 Score=20.90 Aligned_cols=18 Identities=11% Similarity=0.211 Sum_probs=14.8
Q ss_pred CcCccccCCceEEEEcCCC
Q psy4966 17 LTGKHFQEHNAIKIIDPVT 35 (149)
Q Consensus 17 ~~g~~p~~~~~~~i~d~~~ 35 (149)
.+|+.|++++.+++.+ ++
T Consensus 5 ~C~~~P~~~~~V~L~e-~d 22 (80)
T PF01060_consen 5 MCGGKPAKNVKVKLWE-DD 22 (80)
T ss_pred EeCCccCCCCEEEEEE-CC
Confidence 3667799999999999 44
No 143
>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B.
Probab=47.78 E-value=83 Score=22.47 Aligned_cols=44 Identities=27% Similarity=0.425 Sum_probs=27.4
Q ss_pred CCCeEEcCceEEEcCCCeEEEE------ChHHHHHHHhcCCCc--ccEEEEe
Q psy4966 70 DDGWLHTGDLAYRLPDGTHFII------SPCELESIFRQHPDV--EDVAVIG 113 (149)
Q Consensus 70 ~~~~~~TGD~~~~~~~G~~~i~------~~~eIE~~l~~~~~V--~~~~v~~ 113 (149)
+++...|||...-.+.|.+.++ ++.+.-+.+.++-.. -|.+.++
T Consensus 128 ed~vLi~GDl~~~~~~g~l~lLpd~k~~d~~~a~~sl~RLa~~~~fe~lLvG 179 (199)
T PF14597_consen 128 EDRVLITGDLLRSHPAGSLSLLPDEKLYDPTEARASLRRLAAYPDFEWLLVG 179 (199)
T ss_dssp TTTEEEESSSEEBSSTTS-EE--GGG-S-HHHHHHHHHHHHT-TT--EEEES
T ss_pred ccceEEecceeeecCCCCeEECChHHcCCHHHHHHHHHHHhccccccEEeec
Confidence 5678899999999999999998 666766665443332 2444443
No 144
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=44.68 E-value=58 Score=18.35 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=30.5
Q ss_pred hHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCCCCCHHHHHHHhhc
Q psy4966 93 PCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNSSVTAEEVKQFVEF 146 (149)
Q Consensus 93 ~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~l~~ 146 (149)
..++.+.|.++|.|.++..+.... -+.+.+..+ +.+++.+++.+
T Consensus 12 ~~~~~~~l~~~p~V~~~~~vtG~~-----d~~~~v~~~-----d~~~l~~~i~~ 55 (74)
T PF01037_consen 12 YDEFAEALAEIPEVVECYSVTGEY-----DLILKVRAR-----DMEELEEFIRE 55 (74)
T ss_dssp HHHHHHHHHTSTTEEEEEEESSSS-----SEEEEEEES-----SHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEeCCC-----CEEEEEEEC-----CHHHHHHHHHH
Confidence 678999999999999998875422 244555543 55777777544
No 145
>PF01514 YscJ_FliF: Secretory protein of YscJ/FliF family; InterPro: IPR006182 This domain is found in proteins that are related to the YscJ lipoprotein, where it covers most of the sequence, and the flagellar M-ring protein FliF, where it covers the N-terminal region. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flagellar proteins, based on the similarity to YscJ proteins [].; PDB: 1YJ7_A 2Y9J_d.
Probab=41.32 E-value=85 Score=22.47 Aligned_cols=45 Identities=33% Similarity=0.464 Sum_probs=26.0
Q ss_pred ChHHHHHHHhcCCCcccEEEEee-ecC-CCC---CeEE--EEEEeCCCCCCC
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGI-PHD-VFG---ELPA--AVVVPKPNSSVT 136 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~-~~~-~~g---~~~~--a~v~~~~~~~~~ 136 (149)
--.|+|+.|.++++|..|.|.-. |.. .+. +.+- .++.++++..++
T Consensus 116 le~eL~~tI~~i~gV~~A~V~l~~Pe~~~f~~~~~~~sASV~l~~~~g~~l~ 167 (206)
T PF01514_consen 116 LEGELERTIESIDGVESARVHLVLPERSVFGENQQPPSASVVLKLKPGSELS 167 (206)
T ss_dssp HHHHHHHHHTTSTTEEEEEEEEEE----BTTB----EEEEEEEEE-TTS--G
T ss_pred HHHHHHHHHHcCCCeeEEEEEEecCCccccccCCCCCeEEEEEEECCCCChH
Confidence 56799999999999999987653 222 122 1233 444556666655
No 146
>PRK01322 6-carboxyhexanoate--CoA ligase; Provisional
Probab=38.91 E-value=1.2e+02 Score=22.52 Aligned_cols=53 Identities=25% Similarity=0.377 Sum_probs=30.9
Q ss_pred CCCCeeEEEEEcC-C-CccccCCchhhhcccCCCCeEEcCceEEEc--CCCeEEEECh-HHHHHHH
Q psy4966 40 PDGKTGELCLKGD-V-FLGYRNKVEATKEMLDDDGWLHTGDLAYRL--PDGTHFIISP-CELESIF 100 (149)
Q Consensus 40 ~~g~~Gel~v~~~-~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~--~~G~~~i~~~-~eIE~~l 100 (149)
.+|..+|||++-. . ..||+..+. -||+|---+=..- ..|+++|+.. .++++.+
T Consensus 171 ~pgivAElC~SDDP~YtTGYVA~~~--------~gY~RI~~mK~~G~~~GGRvffv~~~~~~~~~i 228 (242)
T PRK01322 171 HPGVIAELCWSDDPDYTTGYVATKK--------LGYHRITNLKEEGTPYGGRIFFVDDSIDLEELI 228 (242)
T ss_pred CCCeEEEEEecCCCCCeeEEEEeCC--------CCeEeCccccccCCCCCCEEEEEeCccCHHHHH
Confidence 4788999999764 4 778874321 1555533333331 2478888732 3566654
No 147
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=37.29 E-value=84 Score=20.64 Aligned_cols=16 Identities=19% Similarity=0.225 Sum_probs=12.4
Q ss_pred cCcCccccCCceEEEEc
Q psy4966 16 TLTGKHFQEHNAIKIID 32 (149)
Q Consensus 16 ~~~g~~p~~~~~~~i~d 32 (149)
+..|+ |-+++++.+..
T Consensus 18 ta~Gk-PAagv~V~L~r 33 (124)
T COG2351 18 TASGK-PAAGVKVELYR 33 (124)
T ss_pred cccCC-cCCCCEEEEEE
Confidence 34677 99999888877
No 148
>PRK00702 ribose-5-phosphate isomerase A; Provisional
Probab=36.14 E-value=1e+02 Score=22.37 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=27.2
Q ss_pred EEcCceEEEcCCCeEEEE-------ChHHHHHHHhcCCCcccEEEE
Q psy4966 74 LHTGDLAYRLPDGTHFII-------SPCELESIFRQHPDVEDVAVI 112 (149)
Q Consensus 74 ~~TGD~~~~~~~G~~~i~-------~~~eIE~~l~~~~~V~~~~v~ 112 (149)
+|++ --.+.++|++.+- .|.+++..|.++|+|-++=++
T Consensus 158 ~R~~-~p~vTd~Gn~IiD~~~~~i~~p~~l~~~l~~i~GVve~GlF 202 (220)
T PRK00702 158 LRMD-EPVVTDNGNYILDVHFGRIPDPEALEKELNNIPGVVEHGLF 202 (220)
T ss_pred EeCC-CCEECCCCCEEEEecCCCcCCHHHHHHHhcCCCcEeeeccC
Confidence 4555 2345667776654 788999999999999877433
No 149
>PRK13978 ribose-5-phosphate isomerase A; Provisional
Probab=35.85 E-value=1e+02 Score=22.65 Aligned_cols=40 Identities=13% Similarity=0.199 Sum_probs=28.0
Q ss_pred eEEcC-ceEEEcCCCeEEEE-------ChHHHHHHHhcCCCcccEEEE
Q psy4966 73 WLHTG-DLAYRLPDGTHFII-------SPCELESIFRQHPDVEDVAVI 112 (149)
Q Consensus 73 ~~~TG-D~~~~~~~G~~~i~-------~~~eIE~~l~~~~~V~~~~v~ 112 (149)
+.|.. +--++.++|++.+- .|.+++..|.++|+|-++=++
T Consensus 161 ~~R~~~~~p~vTDnGN~IlD~~f~~i~dp~~l~~~L~~ipGVVe~GlF 208 (228)
T PRK13978 161 ERRVNEDVAFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYF 208 (228)
T ss_pred EEEecCCCceECCCCcEEEEecCCCcCCHHHHHHHHhcCCcEeeeCCc
Confidence 55543 32355667776664 788999999999999887443
No 150
>PF03927 NapD: NapD protein; InterPro: IPR005623 This entry represents NapD, the twin-arginine signal-peptide-binding chaperone for NapA, functioning as an assembly protein for the periplasmic nitrate reductase NapABC. The periplasmic NapABC enzyme likely functions during growth in nitrate-limited environments [].; PDB: 2JSX_A 2PQ4_A.
Probab=35.55 E-value=73 Score=19.03 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=22.4
Q ss_pred ceEEEcCCCeEEEE----ChHHHHH---HHhcCCCcccEEEEe
Q psy4966 78 DLAYRLPDGTHFII----SPCELES---IFRQHPDVEDVAVIG 113 (149)
Q Consensus 78 D~~~~~~~G~~~i~----~~~eIE~---~l~~~~~V~~~~v~~ 113 (149)
++-..+++|.+.++ +..++.+ .|..+|+|..+..+.
T Consensus 31 EVh~~~~~GKiVVtiE~~~~~~~~~~~~~i~~l~GVlsa~lvY 73 (79)
T PF03927_consen 31 EVHAVDEDGKIVVTIEAESSEEEVDLIDAINALPGVLSASLVY 73 (79)
T ss_dssp EEEEEETTTEEEEEEEESSHHHHHHHHHHHCCSTTEEEEEESS
T ss_pred EEEeeCCCCeEEEEEEeCChHHHHHHHHHHHcCCCceEEEEEE
Confidence 45556667888777 4444444 446678887776543
No 151
>PRK05934 type III secretion system protein; Validated
Probab=35.42 E-value=2.1e+02 Score=22.24 Aligned_cols=52 Identities=10% Similarity=0.090 Sum_probs=34.5
Q ss_pred ChHHHHHHHhcCCCcccEEE-EeeecCCCC-CeEEEEEE--eCCCCCCCHHHHHHH
Q psy4966 92 SPCELESIFRQHPDVEDVAV-IGIPHDVFG-ELPAAVVV--PKPNSSVTAEEVKQF 143 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v-~~~~~~~~g-~~~~a~v~--~~~~~~~~~~~l~~~ 143 (149)
--+|+++.|.++++|++|.| ++.+.+... +.+-|-|+ +.++..++.++++..
T Consensus 72 LEGELaRTIesld~VesARVHLAlPe~s~~~~~pTASVvLtL~~G~tLs~~QV~gI 127 (341)
T PRK05934 72 KKEQLEKDLTMFHPVAQATVALSLETEDDPMSPAEISVILSLPKAETLSPSLLHSI 127 (341)
T ss_pred HHHHHHHHHHcccCcceeEEEEeCCCCCccCCCCceEEEEecCCCCcCCHHHHHHH
Confidence 45789999999999999987 444444322 23444444 466777887766543
No 152
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=34.88 E-value=36 Score=21.17 Aligned_cols=20 Identities=20% Similarity=0.204 Sum_probs=14.5
Q ss_pred CcCccccCCceEEEEcCCCCc
Q psy4966 17 LTGKHFQEHNAIKIIDPVTSV 37 (149)
Q Consensus 17 ~~g~~p~~~~~~~i~d~~~g~ 37 (149)
+.|. |++++++++.+...++
T Consensus 23 ~tg~-Pv~ga~V~l~~~~~~~ 42 (97)
T PF11974_consen 23 STGK-PVAGAEVELYDSRNGQ 42 (97)
T ss_pred CCCC-ccCCCEEEEEECCCCc
Confidence 3577 9999999998833333
No 153
>PF07494 Reg_prop: Two component regulator propeller; InterPro: IPR011110 A large group of two component regulator proteins appear to have the same N-terminal structure of 14 tandem repeats. These repeats show homology to members of IPR002372 from INTERPRO and IPR001680 from INTERPRO indicating that they are likely to form a beta-propeller. This family has been built with artificially high cut-offs in order to avoid overlaps with other beta-propeller families. The fourteen repeats are likely to form two propellers; it is not clear if these structures are likely to recruit other proteins or interact with DNA.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.
Probab=33.69 E-value=39 Score=15.03 Aligned_cols=10 Identities=40% Similarity=0.737 Sum_probs=6.3
Q ss_pred EEcCCCeEEE
Q psy4966 81 YRLPDGTHFI 90 (149)
Q Consensus 81 ~~~~~G~~~i 90 (149)
..|.+|++||
T Consensus 11 ~~D~~G~lWi 20 (24)
T PF07494_consen 11 YEDSDGNLWI 20 (24)
T ss_dssp EE-TTSCEEE
T ss_pred EEcCCcCEEE
Confidence 4477788876
No 154
>PRK15348 type III secretion system lipoprotein SsaJ; Provisional
Probab=33.47 E-value=1.5e+02 Score=22.05 Aligned_cols=21 Identities=19% Similarity=0.169 Sum_probs=18.2
Q ss_pred hHHHHHHHhcCCCcccEEEEe
Q psy4966 93 PCELESIFRQHPDVEDVAVIG 113 (149)
Q Consensus 93 ~~eIE~~l~~~~~V~~~~v~~ 113 (149)
-.|+|+.|.++++|.+|.|.-
T Consensus 109 egELarTI~~idgV~~ArVhL 129 (249)
T PRK15348 109 EQRIEGMLSQMEGVINAKVTI 129 (249)
T ss_pred HHHHHHHHHhCCCeeEeEEEE
Confidence 478999999999999998744
No 155
>PF06970 RepA_N: Replication initiator protein A (RepA) N-terminus; InterPro: IPR010724 This entry represents the N terminus (approximately 80 residues) of replication initiator protein A (RepA), a DNA replication initiator in plasmids []. Most proteins in this entry are bacterial, but archaeal and eukaryotic members are also included.
Probab=33.12 E-value=43 Score=19.96 Aligned_cols=20 Identities=30% Similarity=0.414 Sum_probs=14.8
Q ss_pred EEcCCCeEEEE-ChHHHHHHH
Q psy4966 81 YRLPDGTHFII-SPCELESIF 100 (149)
Q Consensus 81 ~~~~~G~~~i~-~~~eIE~~l 100 (149)
.+|++|.+||. +-+|+...|
T Consensus 42 wiDe~G~vYi~~s~eel~~~L 62 (76)
T PF06970_consen 42 WIDENGNVYIIFSIEELMELL 62 (76)
T ss_pred cCCCCCCEEEEeeHHHHHHHH
Confidence 48999999988 555665555
No 156
>COG2151 PaaD Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]
Probab=32.89 E-value=1.4e+02 Score=19.30 Aligned_cols=29 Identities=24% Similarity=0.239 Sum_probs=23.2
Q ss_pred ChHHHHHHHhcCCCcccEEEEeeecCCCC
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGIPHDVFG 120 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g 120 (149)
-..++++++.++++|.++-|--.-++.|.
T Consensus 68 i~~~v~~al~~~~~v~~v~V~l~~~p~Wt 96 (111)
T COG2151 68 IADQVEAALEEIPGVEDVEVELTLSPPWT 96 (111)
T ss_pred HHHHHHHHHHhcCCcceEEEEEEEcCCCc
Confidence 67899999999999988877666566553
No 157
>PF10955 DUF2757: Protein of unknown function (DUF2757); InterPro: IPR020115 This entry contains proteins with no known function.
Probab=32.22 E-value=75 Score=19.07 Aligned_cols=31 Identities=10% Similarity=0.154 Sum_probs=23.8
Q ss_pred CceEEEcCCCeEEEE-ChHHHHHHHhcCCCcc
Q psy4966 77 GDLAYRLPDGTHFII-SPCELESIFRQHPDVE 107 (149)
Q Consensus 77 GD~~~~~~~G~~~i~-~~~eIE~~l~~~~~V~ 107 (149)
-|+...+++|.+++. --+.-+++|.++|...
T Consensus 38 ~dmI~~~~~G~i~V~~iCe~C~eaL~~nPe~~ 69 (76)
T PF10955_consen 38 QDMISYDENGDIHVKVICEDCQEALERNPEYH 69 (76)
T ss_pred hhheEEcCCCCEEEEEecHHHHHHHHhCcchh
Confidence 378889999999887 4566778888888643
No 158
>PLN02384 ribose-5-phosphate isomerase
Probab=31.93 E-value=1.2e+02 Score=22.78 Aligned_cols=34 Identities=6% Similarity=0.025 Sum_probs=25.4
Q ss_pred eEEEcCCCeEEEE--------ChHHHHHHHhcCCCcccEEEE
Q psy4966 79 LAYRLPDGTHFII--------SPCELESIFRQHPDVEDVAVI 112 (149)
Q Consensus 79 ~~~~~~~G~~~i~--------~~~eIE~~l~~~~~V~~~~v~ 112 (149)
-..+.++|++.+- .|.++++.|.++|+|-++=++
T Consensus 203 ~p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~ipGVVE~GLF 244 (264)
T PLN02384 203 EPFVTDNGNYIVDLYFKRDIGDLKVASDAILRLAGVVEHGMF 244 (264)
T ss_pred CcEECCCCCEEEEecCCCCCCCHHHHHHHHhCCCcEeccCcc
Confidence 4466777876664 677899999999999887433
No 159
>TIGR00021 rpiA ribose 5-phosphate isomerase. This model describes ribose 5-phosphate isomerase, an enzyme of the non-oxidative branch of the pentose phosphate pathway.
Probab=31.88 E-value=1.5e+02 Score=21.49 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=24.5
Q ss_pred EEcCCCeEEEE--------ChHHHHHHHhcCCCcccEEEE
Q psy4966 81 YRLPDGTHFII--------SPCELESIFRQHPDVEDVAVI 112 (149)
Q Consensus 81 ~~~~~G~~~i~--------~~~eIE~~l~~~~~V~~~~v~ 112 (149)
.+.++|++.+- .|.++++.|..+|+|-++=++
T Consensus 163 ~vTdnGN~IiD~~~~~~~~d~~~l~~~l~~i~GVve~GlF 202 (218)
T TIGR00021 163 VVTDNGNYILDCHFGKIIPDPEALEEELKSIPGVVETGLF 202 (218)
T ss_pred EECCCCCEEEEeeCCCCCCCHHHHHHHHhcCCCEEEeeee
Confidence 55667766553 577899999999999888555
No 160
>PRK00114 hslO Hsp33-like chaperonin; Reviewed
Probab=31.13 E-value=2.4e+02 Score=21.42 Aligned_cols=71 Identities=15% Similarity=0.232 Sum_probs=40.6
Q ss_pred CCeeEEEEEcCC---CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE-------------------ChHHHHHH
Q psy4966 42 GKTGELCLKGDV---FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII-------------------SPCELESI 99 (149)
Q Consensus 42 g~~Gel~v~~~~---~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~-------------------~~~eIE~~ 99 (149)
|..|.|++.+.. .+||..+|.........+. .|++..-.+|+|.+. -...++..
T Consensus 71 Gpl~~l~ae~~~~G~VRG~v~~~~~~~~~~~~~~----~~v~~~vG~G~L~Vt~d~g~~~pY~g~V~l~sg~iaedl~~Y 146 (293)
T PRK00114 71 GPLGLIVVDANADGQVRGYVRNPGVDLELNADGK----LDVGQAVGNGYLVVTKDPGLGEPYQGVVPLVSGEIGEDLAYY 146 (293)
T ss_pred CCcceEEEEecCCCcEEEEEeCCccccCcccccC----CCHHHhcCCEEEEEEEcCCCCCCEEEEEECCCCCHHHHHHHH
Confidence 556788887643 8999988763211100001 111111223444333 45677778
Q ss_pred HhcCCCcccEEEEeeec
Q psy4966 100 FRQHPDVEDVAVIGIPH 116 (149)
Q Consensus 100 l~~~~~V~~~~v~~~~~ 116 (149)
+.+..++.-++.+++..
T Consensus 147 f~qSEQips~v~l~v~~ 163 (293)
T PRK00114 147 FARSEQTPSAVGLGVLV 163 (293)
T ss_pred HHhcCCcceEEEEEEee
Confidence 88889988888887754
No 161
>TIGR02544 III_secr_YscJ type III secretion apparatus lipoprotein, YscJ/HrcJ family. All members of this protein family are predicted lipoproteins with a conserved Cys near the N-terminus for cleavage and modification, and are part of known or predicted type III secretion systems. Members are found in both plant and animal pathogens, including the obligately intracellular chlamydial species and (non-pathogenic) root nodule bacteria. The most closely related proteins outside this family are examples of the flagellar M-ring protein FliF.
Probab=30.77 E-value=2e+02 Score=20.42 Aligned_cols=22 Identities=23% Similarity=0.051 Sum_probs=18.8
Q ss_pred ChHHHHHHHhcCCCcccEEEEe
Q psy4966 92 SPCELESIFRQHPDVEDVAVIG 113 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~ 113 (149)
--.|+++.|..+++|.+|.|.-
T Consensus 108 le~EL~rtI~~i~~V~~ArVhl 129 (193)
T TIGR02544 108 IEQRLEQTLSQIDGVISARVHV 129 (193)
T ss_pred HHHHHHHHHHhcCCeeeeEEEE
Confidence 5679999999999999998754
No 162
>PF04658 TAFII55_N: TAFII55 protein conserved region; InterPro: IPR006751 The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcription preinitiation complex. TAFII55 binds to TAFII250 and inhibits its acetyltransferase activity. The exact role of TAFII55 is currently unknown. The conserved region is situated towards the N-terminal of the protein [].; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005669 transcription factor TFIID complex
Probab=29.50 E-value=48 Score=22.89 Aligned_cols=41 Identities=15% Similarity=0.304 Sum_probs=24.4
Q ss_pred CCeeEEEEEcCCCccc-cCCchhh--hcccCCCCeEEcCceEEE
Q psy4966 42 GKTGELCLKGDVFLGY-RNKVEAT--KEMLDDDGWLHTGDLAYR 82 (149)
Q Consensus 42 g~~Gel~v~~~~~~gY-~~~~~~~--~~~~~~~~~~~TGD~~~~ 82 (149)
+..|.+.+.+..+.+- ++-|.-. .++++...||.|+|++++
T Consensus 40 ~R~~~v~i~~~~y~a~LvDLP~IvEs~KT~D~k~~yKtaDI~QM 83 (162)
T PF04658_consen 40 GRRAVVRIGGQIYSAKLVDLPCIVESHKTLDKKNFYKTADISQM 83 (162)
T ss_pred CCEEEEEECCEEcceEEeecCceeeEEeecccCeEEEEecccee
Confidence 4457777766443332 3333322 233455679999999998
No 163
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=29.46 E-value=2e+02 Score=21.32 Aligned_cols=19 Identities=37% Similarity=0.574 Sum_probs=14.3
Q ss_pred CCCeeEEEEEcC-C-CccccC
Q psy4966 41 DGKTGELCLKGD-V-FLGYRN 59 (149)
Q Consensus 41 ~g~~Gel~v~~~-~-~~gY~~ 59 (149)
||..+|||++-. . ..||+.
T Consensus 172 PgiiaELC~SDDP~YtTGYVA 192 (239)
T PF03744_consen 172 PGIIAELCWSDDPDYTTGYVA 192 (239)
T ss_pred CcceEEEEecCCCCCceEEEE
Confidence 688999999764 3 777763
No 164
>PF01430 HSP33: Hsp33 protein; InterPro: IPR000397 Hsp33 is a molecular chaperone, distinguished from all other known chaperones by its mode of functional regulation. Its activity is redox regulated. Hsp33 is a cytoplasmically localized protein with highly reactive cysteines that respond quickly to changes in the redox environment. Oxidizing conditions like H2O2 cause disulphide bonds to form in Hsp33, a process that leads to the activation of its chaperone function [].; GO: 0051082 unfolded protein binding, 0006457 protein folding, 0005737 cytoplasm; PDB: 1VZY_B 1VQ0_A 1I7F_A 3M7M_X 1XJH_A 1HW7_A.
Probab=29.30 E-value=1e+02 Score=23.19 Aligned_cols=67 Identities=19% Similarity=0.276 Sum_probs=37.4
Q ss_pred CCeeEEEEEc--CC-Ccccc---CCchhhhcccCCCCeEEcCceEEEcCCCeEEEE-------------------ChHHH
Q psy4966 42 GKTGELCLKG--DV-FLGYR---NKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII-------------------SPCEL 96 (149)
Q Consensus 42 g~~Gel~v~~--~~-~~gY~---~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~-------------------~~~eI 96 (149)
|..|.|++.+ .. ++||. .+|........ + |++....+|.+.|. -.+.+
T Consensus 70 Gp~~~l~ae~~~~G~vRg~~~~~~~~~~~~~~~~-~------~~~~~vG~G~L~Vt~d~~~~~pY~g~V~L~~~~i~edl 142 (280)
T PF01430_consen 70 GPLGLLVAEADANGNVRGYVRNDENPDVDLPPKN-N------DVAEAVGKGFLSVTRDPGLKEPYQGIVELQSGEIAEDL 142 (280)
T ss_dssp STTEEEEEEEETTSEEEEEEEE-S-TT--TS--T-T-------HHHHH-SEEEEEEEEESSSCEEEEEEESSSSSSHHHH
T ss_pred CCcceEEEEEcCCCcEEEEEEecCCCccchhccc-c------chHhhcCCeEEEEEEeCCCCCcEEEEEECCCCCHHHHH
Confidence 5668888877 34 99999 55554332110 0 22222222333222 56788
Q ss_pred HHHHhcCCCcccEEEEeee
Q psy4966 97 ESIFRQHPDVEDVAVIGIP 115 (149)
Q Consensus 97 E~~l~~~~~V~~~~v~~~~ 115 (149)
+..+.+..++.-++.+++.
T Consensus 143 ~~Y~~~SEQi~t~v~l~v~ 161 (280)
T PF01430_consen 143 EYYFAQSEQIPTAVSLGVL 161 (280)
T ss_dssp HHHHHHHCSS-EEEEEEEE
T ss_pred HHHHHHcCCCCeEEEEEee
Confidence 8899999999888888773
No 165
>cd08047 TAF7 TATA Binding Protein (TBP) Associated Factor 7 (TAF7) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex. The TATA Binding Protein (TBP) Associated Factor 7 (TAF7) is one of several TAFs that bind TBP and are involved in forming the Transcription Factor IID (TFIID) complex. TFIID is one of seven General Transcription Factors (GTF) (TFIIA, TFIIB, TFIID, TFIIE, TFIIF, and TFIID) that are involved in accurate initiation of transcription by RNA polymerase II in eukaryotes. TFIID plays an important role in the recognition of promoter DNA and assembly of the preinitiation complex. TFIID complex is composed of the TBP and at least 13 TAFs. TAFs are named after their electrophoretic mobility in polyacrylamide gels in different species. A new, unified nomenclature has been suggested for the pol II TAFs to show the relationship between TAF orthologs and paralogs. Several hypotheses are proposed for TAFs functions such as serving
Probab=29.17 E-value=40 Score=23.18 Aligned_cols=41 Identities=12% Similarity=0.234 Sum_probs=24.5
Q ss_pred CCeeEEEEEcCCCcc-ccCCchhhh--cccCCCCeEEcCceEEE
Q psy4966 42 GKTGELCLKGDVFLG-YRNKVEATK--EMLDDDGWLHTGDLAYR 82 (149)
Q Consensus 42 g~~Gel~v~~~~~~g-Y~~~~~~~~--~~~~~~~~~~TGD~~~~ 82 (149)
+..+.+.+.+....+ -++-|.-.+ ++++...||.|.|++++
T Consensus 38 ~R~~~v~v~~~~y~a~LvdLPtiiEs~KT~D~k~~yKtaDI~QM 81 (162)
T cd08047 38 SRRAVVRINGQKYPAKLVDLPTIIESHKTLDKKNLYKTADISQM 81 (162)
T ss_pred CcEEEEEECCEEcceEEeecCceeeeeeccccCceEEecChhhE
Confidence 455677776655222 233333222 33455679999999998
No 166
>PF08478 POTRA_1: POTRA domain, FtsQ-type; InterPro: IPR013685 FtsQ/DivIB bacterial division proteins (IPR005548 from INTERPRO) contain an N-terminal POTRA domain (for polypeptide-transport-associated domain). This is found in different types of proteins, usually associated with a transmembrane beta-barrel. FtsQ/DivIB may have chaperone-like roles, which has also been postulated for the POTRA domain in other contexts []. ; PDB: 2ALJ_A 2VH1_B 3J00_Z 2VH2_B.
Probab=28.10 E-value=32 Score=19.40 Aligned_cols=26 Identities=23% Similarity=0.277 Sum_probs=21.3
Q ss_pred EEEEChHHHHHHHhcCCCcccEEEEe
Q psy4966 88 HFIISPCELESIFRQHPDVEDVAVIG 113 (149)
Q Consensus 88 ~~i~~~~eIE~~l~~~~~V~~~~v~~ 113 (149)
++.+.+.++++.|.++|.|+++.+--
T Consensus 31 ~~~~~~~~~~~~l~~~p~V~~v~V~r 56 (69)
T PF08478_consen 31 LFSLDLKKIEQRLEKLPWVKSVSVSR 56 (69)
T ss_dssp CCCSHHHHHHHCCCCTTTEEEEEEEE
T ss_pred EEEECHHHHHHHHHcCCCEEEEEEEE
Confidence 33348899999999999999998753
No 167
>PF01883 DUF59: Domain of unknown function DUF59; InterPro: IPR002744 This family includes prokaryotic proteins of unknown function. The family also includes PhaH (O84984 from SWISSPROT) from Pseudomonas putida. PhaH forms a complex with PhaF (O84982 from SWISSPROT), PhaG (O84983 from SWISSPROT) and PhaI (O84985 from SWISSPROT), which hydroxylates phenylacetic acid to 2-hydroxyphenylacetic acid []. So members of this family may all be components of ring hydroxylating complexes.; PDB: 3LNO_C 3CQ3_A 3CQ2_D 2CU6_B 3CQ1_A 3UX3_B 3UX2_A 1WCJ_A 1UWD_A.
Probab=27.75 E-value=72 Score=18.22 Aligned_cols=20 Identities=25% Similarity=0.368 Sum_probs=14.8
Q ss_pred ChHHHHHHHhcCCCcccEEE
Q psy4966 92 SPCELESIFRQHPDVEDVAV 111 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v 111 (149)
-..+|+++|.++++|.++-|
T Consensus 53 l~~~i~~~l~~l~gv~~V~V 72 (72)
T PF01883_consen 53 LREEIREALKALPGVKSVKV 72 (72)
T ss_dssp HHHHHHHHHHTSTT-SEEEE
T ss_pred HHHHHHHHHHhCCCCceEeC
Confidence 45688999999999887643
No 168
>cd01398 RPI_A RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. This reaction leads to the conversion of phosphosugars into glycolysis intermediates, which are precursors for the synthesis of amino acids, vitamins, nucleotides, and cell wall components. In plants, RPI is part of the Calvin cycle as ribulose 5-phosphate is the carbon dioxide receptor in the first dark reaction of photosynthesis. There are two unrelated types of RPIs (A and B), which catalyze the same reaction, at least one type of RPI is present in an organism. RPI_A is more widely distributed than RPI_B in bacteria, eukaryotes, and archaea.
Probab=27.55 E-value=1.9e+02 Score=20.81 Aligned_cols=39 Identities=21% Similarity=0.305 Sum_probs=27.8
Q ss_pred EEcCc---eEEEcCCCeEEEE-------ChHHHHHHHhcCCCcccEEEE
Q psy4966 74 LHTGD---LAYRLPDGTHFII-------SPCELESIFRQHPDVEDVAVI 112 (149)
Q Consensus 74 ~~TGD---~~~~~~~G~~~i~-------~~~eIE~~l~~~~~V~~~~v~ 112 (149)
+|.++ --.+.++|++.+- .|.+++..|.++|+|-++-++
T Consensus 154 ~R~~~~~~~p~~Td~gn~i~D~~~~~~~~~~~l~~~l~~i~GVve~GlF 202 (213)
T cd01398 154 LREGSGKGGPVVTDNGNYILDVHFGTIEDPEALEKELKSIPGVVEHGLF 202 (213)
T ss_pred EcccCCCCCcEECCCCCEEEEecCCCCCCHHHHHHHHhcCCCeeeeCCC
Confidence 55543 2344566776664 788999999999999887554
No 169
>PF11303 DUF3105: Protein of unknown function (DUF3105); InterPro: IPR021454 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=27.26 E-value=1.9e+02 Score=19.15 Aligned_cols=63 Identities=17% Similarity=0.151 Sum_probs=34.2
Q ss_pred CCCeEEEE-----ChHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeC---CCCCCCHHHHHHHhhccc
Q psy4966 84 PDGTHFII-----SPCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPK---PNSSVTAEEVKQFVEFPR 148 (149)
Q Consensus 84 ~~G~~~i~-----~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~---~~~~~~~~~l~~~l~~~~ 148 (149)
+.|.++|. .+++++..=.........++ ..+.+.. +.++++.... .-...|...|.+|+++..
T Consensus 48 EHGaV~i~Y~p~~~~~~v~~L~~l~~~~~~~~v-isP~~~~-~~pialtaWg~~l~~~~~d~~~i~~Fi~~~~ 118 (130)
T PF11303_consen 48 EHGAVWITYDPCLPPDQVAKLKALAKSCLPYVV-ISPYPGL-DRPIALTAWGRQLKLDSADDPRIKQFIRKYL 118 (130)
T ss_pred hcCcEEEEECCCCCHHHHHHHHHHHhccCCcEE-EecCCCC-CCCEEEeecCCEeecCcCCHHHHHHHHHHHh
Confidence 56777777 55555554333333222333 3344443 3444544432 224678899999998754
No 170
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=26.61 E-value=2.2e+02 Score=21.46 Aligned_cols=41 Identities=12% Similarity=0.018 Sum_probs=23.4
Q ss_pred hHHHHHHHhcCCCcccEEEEeeecCCCCCeEEEEEEeCCCC
Q psy4966 93 PCELESIFRQHPDVEDVAVIGIPHDVFGELPAAVVVPKPNS 133 (149)
Q Consensus 93 ~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~ 133 (149)
..+|++.+.++|+|.++.=+-.........+.+.++.+++.
T Consensus 215 ~~~I~~~i~~~~~v~~v~~l~~~~~G~~~~v~v~i~v~~~~ 255 (299)
T PRK09509 215 RQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQLHLEMEDNL 255 (299)
T ss_pred HHHHHHHHHhCCCCcCceeeeeEeeCCeEEEEEEEEECCCC
Confidence 45688888888988765533333322223344556666543
No 171
>PRK06201 hypothetical protein; Validated
Probab=26.43 E-value=1.2e+02 Score=21.91 Aligned_cols=31 Identities=23% Similarity=0.380 Sum_probs=23.9
Q ss_pred eEEcCceEEEcCCCeEEEEChHHHHHHHhcCC
Q psy4966 73 WLHTGDLAYRLPDGTHFIISPCELESIFRQHP 104 (149)
Q Consensus 73 ~~~TGD~~~~~~~G~~~i~~~~eIE~~l~~~~ 104 (149)
..+.||+..-|.||-+.+ ..+.+++++....
T Consensus 159 ~V~PGD~I~aD~dGVvvi-P~~~a~eV~~~a~ 189 (221)
T PRK06201 159 VIEPGDLIVGDDDGLVAV-PPADAEALLEAAR 189 (221)
T ss_pred EEcCCCEEEEcCCceEEE-cHHHHHHHHHHHH
Confidence 689999999999997777 6666666665443
No 172
>TIGR01204 bioW 6-carboxyhexanoate--CoA ligase. Alternate name: pimeloyl-CoA synthase.
Probab=26.26 E-value=2.6e+02 Score=20.63 Aligned_cols=53 Identities=26% Similarity=0.354 Sum_probs=31.4
Q ss_pred CCCCeeEEEEEcC-C-CccccCCchhhhcccCCCCeEEcCceEEEc--CCCeEEEECh-HHHHHHH
Q psy4966 40 PDGKTGELCLKGD-V-FLGYRNKVEATKEMLDDDGWLHTGDLAYRL--PDGTHFIISP-CELESIF 100 (149)
Q Consensus 40 ~~g~~Gel~v~~~-~-~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~--~~G~~~i~~~-~eIE~~l 100 (149)
-+|..+|||++-. . ..||+-... -||+|---+=..- ..|+++|+.. .++++.+
T Consensus 164 ~pgvvAElC~SDDP~YtTGYVA~~~--------~gY~RI~~lK~~G~~~GGRvffv~~~~~l~~~i 221 (232)
T TIGR01204 164 CPAVVAELCWSDDPDYVTGYVSGKE--------IGYVRITPLKEKGDELGGRVFFVSRKNELSEYI 221 (232)
T ss_pred CCCeEEEEEecCCCCCeeEEEEeCC--------CCeEeCccccccCCCCCCEEEEEeCCCCHHHHH
Confidence 3688899999764 4 788874321 1555533333331 2377888743 4666664
No 173
>TIGR00489 aEF-1_beta translation elongation factor aEF-1 beta. This model describes the archaeal translation elongation factor aEF-1 beta. The member from Sulfolobus solfataricus was demonstrated experimentally. It is a dimer that catalyzes the exchange of GDP for GTP on aEF-1 alpha.
Probab=25.81 E-value=1.2e+02 Score=18.69 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=19.9
Q ss_pred ChHHHHHHHhcCCCcccEEEEee
Q psy4966 92 SPCELESIFRQHPDVEDVAVIGI 114 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~~ 114 (149)
+..+||+.+.+.++|+.+-+...
T Consensus 63 ~td~lee~i~~ve~V~svev~~~ 85 (88)
T TIGR00489 63 GTEAAEESLSGIEGVESVEVTDV 85 (88)
T ss_pred ChHHHHHHHhcCCCccEEEEEEE
Confidence 78999999999999988877654
No 174
>cd00498 Hsp33 Heat shock protein 33 (Hsp33): Cytosolic protein that acts as a molecular chaperone under oxidative conditions. In normal (reducing) cytosolic conditions, four conserved Cys residues are coordinated by a Zn ion. Under oxidative stress (such as heat shock), the Cys are reversibly oxidized to disulfide bonds, which causes the chaperone activity to be turned on. Hsp33 is homodimeric in its functional form.
Probab=25.78 E-value=2.9e+02 Score=20.71 Aligned_cols=71 Identities=21% Similarity=0.294 Sum_probs=40.9
Q ss_pred CCeeEEEEEcCC---CccccCCchhhhcccCCCCeEEcCceEEEcCCCeEEEE-------------------ChHHHHHH
Q psy4966 42 GKTGELCLKGDV---FLGYRNKVEATKEMLDDDGWLHTGDLAYRLPDGTHFII-------------------SPCELESI 99 (149)
Q Consensus 42 g~~Gel~v~~~~---~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~~~G~~~i~-------------------~~~eIE~~ 99 (149)
|..|.|++.+.. .+||..++......- .++- .|++..-.+|.|.+. -...++..
T Consensus 67 Gp~~~i~~~~~~~G~vRG~v~~~~~~~~~~-~~~~---~~v~~~vG~G~L~Vt~d~~~~~pY~g~V~l~~g~iaedl~~Y 142 (275)
T cd00498 67 GPVGLIVADADADGTVRGYVRNPEVDLPLN-EDGK---LDVGDAVGNGYLAVTKDLGLGEPYQGVVPLVSGEIAEDLEYY 142 (275)
T ss_pred CCCceEEEEECCCCcEEEEEeCCcccCCcc-cccc---CCHHHhcCCeEEEEEEeCCCCCCEEEEEEcCCCcHHHHHHHH
Confidence 566788887743 999998876322211 0010 111111123333332 45677788
Q ss_pred HhcCCCcccEEEEeeec
Q psy4966 100 FRQHPDVEDVAVIGIPH 116 (149)
Q Consensus 100 l~~~~~V~~~~v~~~~~ 116 (149)
+.+..++.-++.+++..
T Consensus 143 f~qSEQipt~v~l~v~~ 159 (275)
T cd00498 143 FAQSEQLPSAVGLGVLV 159 (275)
T ss_pred HHhccccceEEEEEEec
Confidence 88889988888888764
No 175
>cd04888 ACT_PheB-BS C-terminal ACT domain of a small (~147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and related domains. This CD includes the C-terminal ACT domain of a small (~147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and other related ACT domains. In B. subtilis, the upstream gene of pheB, pheA encodes prephenate dehydratase (PDT). The presumed product of the pheB gene is chorismate mutase (CM). The deduced product of the B. subtilis pheB gene, however, has no significant homology to the CM portion of the bifunctional CM-PDT of Escherichia coli. The presence of an ACT domain lends support to the prediction that these proteins function as a phenylalanine-binding regulatory protein. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.24 E-value=74 Score=18.00 Aligned_cols=22 Identities=32% Similarity=0.380 Sum_probs=16.6
Q ss_pred ChHHHHHHHhcCCCcccEEEEe
Q psy4966 92 SPCELESIFRQHPDVEDVAVIG 113 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~ 113 (149)
.+.+|-+.|.++++|.++.+++
T Consensus 55 ~l~~l~~~L~~i~~V~~v~~~~ 76 (76)
T cd04888 55 DIDELLEELREIDGVEKVELVG 76 (76)
T ss_pred HHHHHHHHHhcCCCeEEEEEeC
Confidence 4566777788899999887653
No 176
>PF08887 GAD-like: GAD-like domain; InterPro: IPR014983 This domain is functionally uncharacterised, but it appears to be distantly related to the GAD domain IPR004115 from INTERPRO.
Probab=25.15 E-value=1.4e+02 Score=19.06 Aligned_cols=31 Identities=19% Similarity=0.410 Sum_probs=22.6
Q ss_pred CCCeEEEEChHHHHHHHhcC------CCcccEEEEee
Q psy4966 84 PDGTHFIISPCELESIFRQH------PDVEDVAVIGI 114 (149)
Q Consensus 84 ~~G~~~i~~~~eIE~~l~~~------~~V~~~~v~~~ 114 (149)
.+|++++++|.+-+.+|... .....+.+++.
T Consensus 49 ~dG~f~~vnP~dy~~vl~~~~~~~~~~~~~~~~~ia~ 85 (109)
T PF08887_consen 49 GDGLFWLVNPDDYEDVLDEWLGGTPLFDPDNYIPIAR 85 (109)
T ss_pred cCcEEEEECHHHHHHHHHHHhcCCccccCceEEEEEE
Confidence 47999999999999998664 33345556554
No 177
>PF11623 DUF3252: Protein of unknown function (DUF3252); InterPro: IPR021659 This family of proteins has no known function. Some members are annotated as Ssl0352 however this cannot be confirmed. Currently there is no known function. ; PDB: 3C4S_B 2JZ2_A.
Probab=23.42 E-value=1.1e+02 Score=16.89 Aligned_cols=14 Identities=7% Similarity=0.320 Sum_probs=6.7
Q ss_pred ccCCceEEEEcCCC
Q psy4966 22 FQEHNAIKIIDPVT 35 (149)
Q Consensus 22 p~~~~~~~i~d~~~ 35 (149)
.+||+.+++.+|.+
T Consensus 2 ilPG~~V~V~n~~~ 15 (53)
T PF11623_consen 2 ILPGSTVRVKNPND 15 (53)
T ss_dssp --TT-EEEE--TTS
T ss_pred ccCCCEEEEeCCCC
Confidence 46888888888543
No 178
>PRK09262 hypothetical protein; Provisional
Probab=23.26 E-value=1.4e+02 Score=21.79 Aligned_cols=30 Identities=13% Similarity=0.255 Sum_probs=22.9
Q ss_pred eEEcCceEEEcCCCeEEEEChHHHHHHHhcC
Q psy4966 73 WLHTGDLAYRLPDGTHFIISPCELESIFRQH 103 (149)
Q Consensus 73 ~~~TGD~~~~~~~G~~~i~~~~eIE~~l~~~ 103 (149)
..+.||+..-|.||-+.+ ....+++++...
T Consensus 157 ~V~PGD~IvaD~dGVvvI-P~~~~~eVl~~a 186 (225)
T PRK09262 157 LVNPGDVVVADDDGVVVV-PRAQAAAVADAA 186 (225)
T ss_pred EECCCCEEEEECCcEEEE-CHHHHHHHHHHH
Confidence 578999999999997777 555666666544
No 179
>COG0129 IlvD Dihydroxyacid dehydratase/phosphogluconate dehydratase [Amino acid transport and metabolism / Carbohydrate transport and metabolism]
Probab=22.68 E-value=1.5e+02 Score=24.94 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=26.5
Q ss_pred eEEcCceEEEcCC-CeEEEE-ChHHHHHHHhcCCC
Q psy4966 73 WLHTGDLAYRLPD-GTHFII-SPCELESIFRQHPD 105 (149)
Q Consensus 73 ~~~TGD~~~~~~~-G~~~i~-~~~eIE~~l~~~~~ 105 (149)
+.++||+.++|-. +.|.+. +.+|+++.....+.
T Consensus 506 lvrdGD~I~ID~~~~~l~l~vseeEla~R~~~~~~ 540 (575)
T COG0129 506 LVRDGDIIRIDIPNRTLDLLVSEEELAARRAEWPA 540 (575)
T ss_pred EEecCCEEEEECCCCeeeeecCHHHHHHHHhhccC
Confidence 8999999999855 667776 88999998866543
No 180
>TIGR02962 hdxy_isourate hydroxyisourate hydrolase. Members of this family, hydroxyisourate hydrolase, represent a distinct clade of transthyretin-related proteins. Bacterial members typically are encoded next to ureidoglycolate hydrolase and often near either xanthine dehydrogenase or xanthine/uracil permease genes and have been demonstrated to have hydroxyisourate hydrolase activity. In eukaryotes, a clade separate from the transthyretins (a family of thyroid-hormone binding proteins) has also been shown to have HIU hydrolase activity in urate catabolizing organisms. Transthyretin, then, would appear to be the recently diverged paralog of the more ancient HIUH family.
Probab=22.64 E-value=2.2e+02 Score=18.29 Aligned_cols=15 Identities=13% Similarity=0.173 Sum_probs=12.2
Q ss_pred CcCccccCCceEEEEc
Q psy4966 17 LTGKHFQEHNAIKIID 32 (149)
Q Consensus 17 ~~g~~p~~~~~~~i~d 32 (149)
+.|+ |..|+.+.+..
T Consensus 11 ~~G~-PAagv~V~L~~ 25 (112)
T TIGR02962 11 TSGK-PAAGVPVTLYR 25 (112)
T ss_pred CCCc-cCCCCEEEEEE
Confidence 4577 99999999876
No 181
>PF06026 Rib_5-P_isom_A: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); InterPro: IPR004788 Ribose 5-phosphate isomerase, also known as phosphoriboisomerase, catalyses the reversible conversion of D-ribose 5-phosphate to D-ribulose 5-phosphate, the first step in the non-oxidative branch of the pentose phosphate pathway []. This reaction enables ribose to be synthesized from sugars, as well as the recycling of sugars during the degradation of nucleotides. There are two unrelated types of ribose 5-phosphate isomerases: type A (RpiA) is the most common and is found in most organisms, while type B (RpiB) is restricted to specific eukaryotic and prokaryotic species. Escherichia coli produces both RpiA and RpiB (also known as AlsB), although RpiA accounts for 99% of total RPI enzymes []. This entry represents type A (RpiA) enzymes found in eukaryotes (plants, Metazoa and fungi), bacteria and archaea.; GO: 0004751 ribose-5-phosphate isomerase activity, 0009052 pentose-phosphate shunt, non-oxidative branch; PDB: 1M0S_B 3HHE_B 1LKZ_B 1KS2_A 1O8B_A 3UW1_A 3U7J_A 3L7O_A 1XTZ_A 1UJ6_A ....
Probab=22.47 E-value=1.2e+02 Score=21.22 Aligned_cols=40 Identities=20% Similarity=0.225 Sum_probs=26.2
Q ss_pred EEcCceEEE-cCCCeEEEE-------ChHHHHHHHhcCCCcccEEEEe
Q psy4966 74 LHTGDLAYR-LPDGTHFII-------SPCELESIFRQHPDVEDVAVIG 113 (149)
Q Consensus 74 ~~TGD~~~~-~~~G~~~i~-------~~~eIE~~l~~~~~V~~~~v~~ 113 (149)
+|++.-+.+ .++|++.+- .|.++++.|.++|+|-+.-++.
T Consensus 111 lR~~~~~p~vTDnGN~IlD~~f~~i~d~~~l~~~L~~i~GVVe~GlF~ 158 (173)
T PF06026_consen 111 LRMASGGPFVTDNGNYILDVHFGPIDDPEELERELKSIPGVVETGLFL 158 (173)
T ss_dssp E-EETTEE-B-TTS-EEEEEESSSBSSHHHHHHHHHTSTTEEEESEE-
T ss_pred EccCCCCCEEeCCCCEEEEecCCCCCCHHHHHHHHhCCCCEEeECcCc
Confidence 444433444 456766654 8999999999999998887664
No 182
>cd05822 TLP_HIUase HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU). HIUase has high sequence similarity with transthyretins and is a member of the transthyretin-like protein (TLP) family. HIUase is distinguished from transthyretins by a conserved signature motif at its C-terminus that forms part of the active site. In HIUase, this motif is YRGS, while transthyretins have a conserved TAVV sequence in the same location. Most HIUases are cytosolic but in plants and slime molds, they are peroxisomal based on the presence of N-terminal periplasmic localization sequences. HIUase forms a homotetramer with each subunit consisting of eight beta-strands arranged in two sheets and a short alpha-helix. The central channel of the tetramer contains two independent binding sites, each located betw
Probab=22.38 E-value=2.3e+02 Score=18.28 Aligned_cols=16 Identities=31% Similarity=0.281 Sum_probs=12.6
Q ss_pred cCcCccccCCceEEEEc
Q psy4966 16 TLTGKHFQEHNAIKIID 32 (149)
Q Consensus 16 ~~~g~~p~~~~~~~i~d 32 (149)
++.|+ |..|+++.+..
T Consensus 10 t~~G~-PAagv~V~L~~ 25 (112)
T cd05822 10 TATGK-PAAGVAVTLYR 25 (112)
T ss_pred CCCCc-ccCCCEEEEEE
Confidence 34577 99999998877
No 183
>PRK08245 hypothetical protein; Validated
Probab=21.73 E-value=2e+02 Score=21.12 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=24.2
Q ss_pred eEEcCceEEEcCCCeEEEEChHHHHHHHhcCC
Q psy4966 73 WLHTGDLAYRLPDGTHFIISPCELESIFRQHP 104 (149)
Q Consensus 73 ~~~TGD~~~~~~~G~~~i~~~~eIE~~l~~~~ 104 (149)
..+.||+..-|.||-+.| ..+.+|++|....
T Consensus 168 ~V~PGD~I~aD~dGVvvI-P~~~a~~Vl~~a~ 198 (240)
T PRK08245 168 AVFPGDIIVADDDGVVVI-PAALADEVAAEAV 198 (240)
T ss_pred EEcCCCEEEEcCCceEEE-cHHHHHHHHHHHH
Confidence 688999999999997777 6666777765543
No 184
>COG0120 RpiA Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=21.58 E-value=1.5e+02 Score=21.86 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=26.4
Q ss_pred EEcCCCeEEEE-------ChHHHHHHHhcCCCcccEEEEe
Q psy4966 81 YRLPDGTHFII-------SPCELESIFRQHPDVEDVAVIG 113 (149)
Q Consensus 81 ~~~~~G~~~i~-------~~~eIE~~l~~~~~V~~~~v~~ 113 (149)
.+..+|++.+- .|.+.|+.|..+|+|-|.=++.
T Consensus 168 viTDnGN~IlDv~~~~i~dp~~le~~l~~IpGVVE~GlF~ 207 (227)
T COG0120 168 VITDNGNYILDVHFGRIEDPEELEKELNAIPGVVENGLFA 207 (227)
T ss_pred EEeeCCCEEEEecCCCcCCHHHHHHHHhCCCCEEEecccc
Confidence 55566777664 8999999999999998887664
No 185
>PF10102 DUF2341: Domain of unknown function (DUF2341); InterPro: IPR018765 This domain of unknown function is found in various bacterial proteins, including MotA/TolQ/ExbB proton channels and other transport proteins.
Probab=21.48 E-value=1.6e+02 Score=17.98 Aligned_cols=39 Identities=21% Similarity=0.257 Sum_probs=24.8
Q ss_pred CceEEEEcCCCCccCC--------CCCeeEEEEEcCC-------CccccCCchhh
Q psy4966 25 HNAIKIIDPVTSVQLP--------DGKTGELCLKGDV-------FLGYRNKVEAT 64 (149)
Q Consensus 25 ~~~~~i~d~~~g~~~~--------~g~~Gel~v~~~~-------~~gY~~~~~~~ 64 (149)
+..+|+.+ +++.++| .+....|+|+-|. ..=|++++.++
T Consensus 3 g~DIRf~d-~~~~~L~ywIE~wd~~~~~A~iWVkvp~i~~~~~~i~lyyGn~~a~ 56 (89)
T PF10102_consen 3 GSDIRFYD-SDGTPLPYWIESWDPTNEQALIWVKVPSIPAGSTTIYLYYGNPSAT 56 (89)
T ss_pred CccEEEEe-CCCCEeEEEEEECCCCCCeEEEEEECCCCCCCCcEEEEEECCCCCc
Confidence 45667777 6776554 3456889999885 22267766544
No 186
>PF09695 YtfJ_HI0045: Bacterial protein of unknown function (YtfJ_HI0045); InterPro: IPR006513 These are sequences from gammaproteobacteria that are related to the Escherichia coli protein, YtfJ.
Probab=21.23 E-value=1.8e+02 Score=20.11 Aligned_cols=25 Identities=16% Similarity=0.274 Sum_probs=19.6
Q ss_pred ceEEEcCCCeEEEE-----ChHHHHHHHhc
Q psy4966 78 DLAYRLPDGTHFII-----SPCELESIFRQ 102 (149)
Q Consensus 78 D~~~~~~~G~~~i~-----~~~eIE~~l~~ 102 (149)
-+..+|.+|.+.|. ++.||++++..
T Consensus 127 aiiVlDK~G~V~F~k~G~Ls~~Ev~qVi~L 156 (160)
T PF09695_consen 127 AIIVLDKQGKVQFVKEGALSPAEVQQVIAL 156 (160)
T ss_pred eEEEEcCCccEEEEECCCCCHHHHHHHHHH
Confidence 35667888888776 99999998854
No 187
>KOG3050|consensus
Probab=21.08 E-value=30 Score=25.74 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=13.7
Q ss_pred CCchhhhcccCC---CCeEEcCceE
Q psy4966 59 NKVEATKEMLDD---DGWLHTGDLA 80 (149)
Q Consensus 59 ~~~~~~~~~~~~---~~~~~TGD~~ 80 (149)
...+..+..|.+ =|||.||+-.
T Consensus 78 kk~eqykqVFpdl~vlGwYttG~d~ 102 (299)
T KOG3050|consen 78 KKEEQYKQVFPDLYVLGWYTTGSDP 102 (299)
T ss_pred HHHHHHHHhcccceEEEEeecCCCC
Confidence 334455555632 2899999865
No 188
>PF08255 Leader_Trp: Trp-operon Leader Peptide; InterPro: IPR013205 The tryptophan operon regulatory region of Citrobacter freundii (leader transcript) encodes a 14-residue peptide containing characteristic tandem tryptophan residues. It is about 10 nucleotides shorter than those of Escherichia coli and Salmonella typhimurium [].
Probab=21.08 E-value=48 Score=13.04 Aligned_cols=6 Identities=50% Similarity=1.310 Sum_probs=4.5
Q ss_pred CCeEEc
Q psy4966 71 DGWLHT 76 (149)
Q Consensus 71 ~~~~~T 76 (149)
.+|++|
T Consensus 8 ~~WWrt 13 (14)
T PF08255_consen 8 HGWWRT 13 (14)
T ss_pred eeEEEc
Confidence 578876
No 189
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=20.84 E-value=4.9e+02 Score=21.57 Aligned_cols=79 Identities=14% Similarity=0.084 Sum_probs=40.6
Q ss_pred cCCCCCeeEEEEEcCCCccccCCchhhhcccCCCCeEEcCceEEEc--CCC--eEEEE--------------ChHHHHHH
Q psy4966 38 QLPDGKTGELCLKGDVFLGYRNKVEATKEMLDDDGWLHTGDLAYRL--PDG--THFII--------------SPCELESI 99 (149)
Q Consensus 38 ~~~~g~~Gel~v~~~~~~gY~~~~~~~~~~~~~~~~~~TGD~~~~~--~~G--~~~i~--------------~~~eIE~~ 99 (149)
++..|+.=+|++.... |.| -|+.||+.++. ..+ .|.|+ +-.+|+++
T Consensus 351 ele~G~~YelviTt~~--GLy--------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~a 414 (528)
T PF03321_consen 351 ELEVGEEYELVITTNS--GLY--------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEA 414 (528)
T ss_dssp G--TT-EEEEEEESTT--S-S--------------SEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHH
T ss_pred HhcCCCeEEEEEeccc--cee--------------eeecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHH
Confidence 4456666677774433 111 27899999984 123 45554 67778877
Q ss_pred HhcC---CC--cccEEEEeeecCCCCCeEEEEEEeCCC
Q psy4966 100 FRQH---PD--VEDVAVIGIPHDVFGELPAAVVVPKPN 132 (149)
Q Consensus 100 l~~~---~~--V~~~~v~~~~~~~~g~~~~a~v~~~~~ 132 (149)
+.+. .+ +.+-.+.+........+-+.++.+...
T Consensus 415 v~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 415 VARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp HHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred HHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 7554 33 445555544222223344555555543
No 190
>TIGR02798 ligK_PcmE 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase. Members of this protein family 4-carboxy-4-hydroxy-2-oxoadipate aldolase, also called 4-oxalocitramalate aldolase. This enzyme of the protocatechuate 4,5-cleavage pathway converts its substrate to pyruvate plus oxaloacetate. Protocatechuate is an intermediate in many pathways for degrading aromatic compounds, including lignin, fluorene, etc. Hara, et al. showed the LigK gene was not only a 4-carboxy-4-hydroxy-2-oxoadipate aldolase but also the enzyme of the following step, oxaloacetate decarboxylase.
Probab=20.83 E-value=1.7e+02 Score=21.34 Aligned_cols=30 Identities=13% Similarity=0.285 Sum_probs=22.4
Q ss_pred eEEcCceEEEcCCCeEEEEChHHHHHHHhcC
Q psy4966 73 WLHTGDLAYRLPDGTHFIISPCELESIFRQH 103 (149)
Q Consensus 73 ~~~TGD~~~~~~~G~~~i~~~~eIE~~l~~~ 103 (149)
..+.||+..-|.||-+.+ ..+.+++++...
T Consensus 155 ~V~PGD~i~aD~dGVvvi-P~~~~~~vl~~a 184 (222)
T TIGR02798 155 LVNPGDVVVADDDGVVVV-PRANAGAVLDAA 184 (222)
T ss_pred EECCCCEEEEcCCcEEEE-cHHHHHHHHHHH
Confidence 578999999999997776 555556655443
No 191
>PF07194 P2: P2 response regulator binding domain; InterPro: IPR010808 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. The response regulators for CheA bind to the P2 domain, which is found between IPR008207 from INTERPRO and IPR004105 from INTERPRO as either one or two copies. Highly flexible linkers connect P2 to the rest of CheA and impart remarkable mobility to the P2 domain. This feature is thought to enhance the inter CheA dimer phosphotransfer reactions within the signalling complex, thereby amplifying the phosphorylation signal [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0006928 cellular component movement; PDB: 1U0S_A.
Probab=20.68 E-value=2e+02 Score=17.08 Aligned_cols=22 Identities=27% Similarity=0.359 Sum_probs=17.3
Q ss_pred ChHHHHHHHhcCCCcccEEEEe
Q psy4966 92 SPCELESIFRQHPDVEDVAVIG 113 (149)
Q Consensus 92 ~~~eIE~~l~~~~~V~~~~v~~ 113 (149)
...+|++.+...+.|..+-|..
T Consensus 61 ~~e~i~~~l~~~~~V~~v~V~e 82 (84)
T PF07194_consen 61 DEEEIEEVLASISEVESVEVEE 82 (84)
T ss_dssp -HHHHHHHHHTSSS-SEEEEEE
T ss_pred CHHHHHHHHhCCCcEEEEEEEE
Confidence 7899999999999998877654
Done!