BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy4967
MNQGVRLALGAFKSSPIPSILSEAGEPPLSYRREILTCNYLFNTQRNPKHFLSPLLTDDS
LQQLYERKSSYEKPLRIRGKLLLEKYGIDHLDFLSPSPQTSAPWLIEPPPVDYSLRKFNK
DTDSKEEINISFQELLQKTPDSTVVYTDASKNDVAVSSAFCSQDTKFSSRLHPLLSICNA
ELTAILFAIHFSISAHLNNVNRAYLVICSDSLSALQTLQNIFSLNPIAGEIRDLILTNKS
KLNVRFIWVPSHVGIAGNEEADRLAKEALTSTHPTINKIPIPDYKAYSKRKILSAWNSEW
HNLQNNKLQEIKLENKPWNPPYLILYYKNEIHSLIHISHFIVHTLIALKEYLPE

High Scoring Gene Products

Symbol, full name Information P value

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy4967
        (354 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ASPGD|ASPL0000075333 - symbol:AN10625 species:162425 "Eme...   154  4.3e-08   1


>ASPGD|ASPL0000075333 [details] [associations]
            symbol:AN10625 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR002156 InterPro:IPR012337 Pfam:PF00075 PROSITE:PS50879
            GO:GO:0003676 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0004523
            EnsemblFungi:CADANIAT00005305 Uniprot:C8V7Z8
        Length = 486

 Score = 154 (59.3 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 64/245 (26%), Positives = 113/245 (46%)

Query:   121 DTDSKEEINISFQELLQKTPDSTVVYTDASK-NDVAVSSAFC-----SQDTKFSSRLHPL 174
             D D++  I  + + +L + P    +YTD S  N    ++A C     S+ +    +    
Sbjct:   162 DGDAETAIE-THRNILNRAPRPIALYTDGSGINGRVGAAAICPKYLISRSSYMGQQSEST 220

Query:   175 LSICNAELTAILFAIHFSISAHLNNVNRAYLVICSDSLSALQTLQNIFSLNP---IAGEI 231
             + +  AEL  IL A+   +   + +      VI +D+ + LQ L+N  S +    +   I
Sbjct:   221 VYV--AELQGILLALVIILQRQMQHA-----VIFTDNQATLQALRNPGSQSGQYILEAII 273

Query:   232 RDLILTNKSKLNVRFIWVPSHVGIAGNEEADRLAKEALTSTHPTINKIPIPDYKAYSKR- 290
               L    K+ LNV F W+P+H G+ GNE+ADR AKEA        ++  +    A  +R 
Sbjct:   274 MALNKGRKAGLNVHFRWIPAHRGVEGNEQADRRAKEATGWRRIRGHRGRMTIRSAVKRRA 333

Query:   291 -KILSA-WNSEWHNLQNNKLQEIKLENKPWNPPYLILYYKNEIHSLIHISHFIVHT-LIA 347
              ++++A W ++W +  + +  E+  E  P  P   +L    ++H  +      + T  I 
Sbjct:   334 HEVVNARWENDWKSCHHGR--EL-YELTP-TPTRKVLRVHQDLHRALSTIIVQMRTGKIG 389

Query:   348 LKEYL 352
             L+ YL
Sbjct:   390 LRHYL 394


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      354       354   0.00079  117 3  11 22  0.41    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  243 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  33.84u 0.09s 33.93t   Elapsed:  00:00:30
  Total cpu time:  33.84u 0.09s 33.93t   Elapsed:  00:00:31
  Start:  Thu Aug 15 12:37:05 2013   End:  Thu Aug 15 12:37:36 2013

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